CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050844	Klebsiella pneumoniae strain Bckp186 plasmid pBckp186, complete sequence	0 crisprs	RT,csa3	0	0	2	0
NZ_CP050843	Klebsiella pneumoniae strain Bckp186 chromosome, complete genome	3 crisprs	RT,csa3,cas3,DEDDh,DinG,WYL	0	0	8	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18550 : 87429

Salmonella_phage(31.58%)

protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064669678.1\|18550_18913_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	1.0e-13	40.0
WP_007372130.1\|23190_23370_+	hypothetical protein	A0A1B2IAL0	Erwinia_phage	6.8e-11	60.7
WP_167829913.1\|23639_24608_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.6e-178	96.0
WP_101989880.1\|25445_27044_+	sensor domain-containing diguanylate cyclase	G3MA91	Bacillus_virus	4.3e-19	31.9
WP_077253754.1\|27135_27249_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	4.7e-10	81.1
WP_080876690.1\|30086_31952_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_080876678.1\|32155_33712_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.1e-104	43.6
WP_080876679.1\|33708_34950_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_080876680.1\|35066_38183_+	HsdR family type I site-specific deoxyribonuclease	A0A220A398	Liberibacter_phage	4.1e-26	24.1
WP_023279773.1\|38278_39247_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.9e-180	96.6
WP_004883460.1\|39556_40960_+\|transposase	ISNCY-like element ISKpn21 family transposase	NA	NA	NA	NA
WP_004883463.1\|40988_41621_-	hypothetical protein	NA	NA	NA	NA
WP_167830403.1\|41847_43194_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_167830398.1\|43628_44597_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.8e-185	99.1
WP_029497499.1\|46029_46554_-	hypothetical protein	NA	NA	NA	NA
WP_032435691.1\|48095_48560_+	hypothetical protein	NA	NA	NA	NA
WP_102097429.1\|49344_50313_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.3e-172	91.6
WP_048335769.1\|50432_50807_+	hypothetical protein	J9Q7G3	Salmonella_phage	2.6e-20	55.3
WP_125337164.1\|50940_51438_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_087794475.1\|51588_52735_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.8e-148	93.0
WP_167830399.1\|52853_53822_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.3e-183	98.1
WP_025999313.1\|55195_55678_+	hypothetical protein	NA	NA	NA	NA
WP_017900939.1\|55953_56358_-	DUF2251 domain-containing protein	NA	NA	NA	NA
WP_040238691.1\|57087_58170_+	DNA-binding transcriptional repressor LacI	C6ZCU4	Enterobacteria_phage	1.9e-188	97.8
WP_167830400.1\|58277_61352_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.7
WP_167830401.1\|61403_62657_+	lactose permease	NA	NA	NA	NA
WP_000227969.1\|63929_65006_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_001572456.1\|65618_66140_+	RNA polymerase sigma factor FecI	NA	NA	NA	NA
WP_070584980.1\|66136_67090_+	fec operon regulator FecR	NA	NA	NA	NA
WP_020325014.1\|67176_69501_+	Fe(3+) dicitrate transport protein FecA	NA	NA	NA	NA
WP_167829911.1\|69545_70448_+	Fe(3+) dicitrate ABC transporter substrate-binding protein FecB	NA	NA	NA	NA
WP_004118243.1\|70444_71443_+	iron-dicitrate ABC transporter permease FecC	NA	NA	NA	NA
WP_070584978.1\|71439_72396_+	Fe(3+) dicitrate ABC transporter permease subunit FecD	NA	NA	NA	NA
WP_004152282.1\|72396_73164_+	Fe(3+) dicitrate ABC transporter ATP-binding protein FecE	G3M9Y6	Bacillus_virus	9.8e-14	25.2
WP_070083105.1\|73262_73556_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	6.8e-48	95.9
WP_167830404.1\|73886_74129_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000427620.1\|74426_75431_-\|transposase	IS110-like element IS4321 family transposase	NA	NA	NA	NA
WP_167829910.1\|77206_80266_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	96.1
WP_167830402.1\|80317_81571_+	lactose permease	NA	NA	NA	NA
WP_004026565.1\|83353_83806_-	hypothetical protein	NA	NA	NA	NA
WP_004026564.1\|84308_85244_-\|protease	omptin family outer membrane protease Kop	NA	NA	NA	NA
WP_088765928.1\|86308_87429_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.7e-51	42.8

DBSCAN-SWA_2

106527 : 173853

Salmonella_phage(30.43%)

holin,integrase,transposase

attL 122857:122916|attR 129935:130002

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023288366.1\|106527_107544_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_085163625.1\|108794_109331_+	plasmid transfer protein	NA	NA	NA	NA
WP_017900946.1\|111625_112636_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
WP_023287153.1\|113365_114532_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2
WP_004117790.1\|114531_115503_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
WP_004215130.1\|117000_117441_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	4.4e-19	53.8
WP_004189161.1\|117437_117788_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	5.2e-39	63.8
WP_004902302.1\|117818_119411_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
WP_135733226.1\|119679_120648_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	6.2e-13	28.4
122857:122916	attL	NA	NA	NA	NA
WP_020477096.1\|122976_123420_+	hypothetical protein	NA	NA	NA	NA
WP_004186937.1\|123429_123837_+	hypothetical protein	NA	NA	NA	NA
WP_135733260.1\|123879_124839_+	DNA replication protein	NA	NA	NA	NA
WP_074168518.1\|124928_125897_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.4
WP_167830405.1\|125940_126660_+	hypothetical protein	NA	NA	NA	NA
WP_004197568.1\|126656_126980_+	hypothetical protein	NA	NA	NA	NA
WP_004213829.1\|127131_127449_+	hypothetical protein	NA	NA	NA	NA
WP_048322233.1\|127514_128651_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_048322234.1\|128828_129083_+	hypothetical protein	NA	NA	NA	NA
WP_077255812.1\|130441_131410_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.1e-182	97.5
129935:130002	attR	NA	NA	NA	NA
WP_167829921.1\|133449_134547_-	RepB family plasmid replication initiator protein	J9Q7H0	Salmonella_phage	7.6e-60	43.7
WP_032437437.1\|136809_137346_+	hypothetical protein	NA	NA	NA	NA
WP_032437439.1\|137361_137922_+	hypothetical protein	NA	NA	NA	NA
WP_080876712.1\|139403_139973_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_167829920.1\|140031_140727_+	molecular chaperone	NA	NA	NA	NA
WP_167829919.1\|140738_143132_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_032437452.1\|143152_144172_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_101984609.1\|146458_147193_+	hypothetical protein	J9Q7Y8	Salmonella_phage	2.7e-29	34.3
WP_135733212.1\|147789_149328_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	2.2e-278	94.3
WP_000612626.1\|149376_149724_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_102054792.1\|149720_150125_-\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	8.1e-68	97.0
WP_101984415.1\|152418_152796_-	phosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_102054677.1\|153494_154553_-	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_101984514.1\|154635_155460_-	shikimate 5-dehydrogenase	NA	NA	NA	NA
WP_101984517.1\|155603_157367_+	SgrR family transcriptional regulator	NA	NA	NA	NA
WP_167829925.1\|158893_160066_+	MFS transporter	NA	NA	NA	NA
WP_101984513.1\|160082_160787_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_101984512.1\|160899_161775_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_167829918.1\|163048_164416_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	1.3e-32	31.8
WP_135733226.1\|165696_166665_+\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	6.2e-13	28.4
WP_077268341.1\|166674_166851_-\|transposase	transposase	Q76S41	Shigella_phage	5.2e-11	63.5
WP_017880269.1\|168252_168468_+\|holin	holin	A5LH82	Enterobacteria_phage	7.9e-30	87.3
WP_064824462.1\|168467_168965_+	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.3e-78	84.6
WP_017898986.1\|168961_169312_+	hypothetical protein	R9TPM9	Aeromonas_phage	1.8e-10	39.8
WP_167829917.1\|171059_172010_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	4.9e-180	97.8
WP_004114612.1\|173170_173518_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-60	96.5
WP_135733211.1\|173514_173853_-\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	1.5e-46	80.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP050843

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050843_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050843_1

3612800-3612877

Orphan

Consensus_repeat	Method
TGCCGGGCGGCGGCTAACGCCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050843_1

>merge|NZ_CP050843|1|3612800-3612877|CRISPRCasFinder
TGCCGGGCGGCGGCTAACGCCTTGCCCGGCCTACGGTGCTATTGCGCGGTTATTTTGCCGGGCGGCGGCTGACGCCTT

>NZ_CP050843|1|1|3612800-3612877|CRISPRCasFinder
TGCCGGGCGGCGGCTAACGCCTT	GCCCGGCCTACGGTGCTATTGCGCGGTTATTT
TGCCGGGCGGCGGCTGACGCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050843.1\|WP_023282312.1\|3602206_3603304_+\|two-component-system-sensor-histidine-kinase-PmrB	unknown	unknown	gnl\|CDD\|236751
NZ_CP050843.1\|WP_002895575.1\|3612170_3612647_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP050843.1\|WP_002895580.1\|3609556_3610597_-\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP050843.1\|WP_004142100.1\|3607663_3608419_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP050843.1\|WP_009486308.1\|3606948_3607671_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP050843.1\|WP_004147672.1\|3613425_3614808_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP050843.1\|WP_004179084.1\|3623030_3625718_-\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775
NZ_CP050843.1\|WP_032411915.1\|3605985_3606198_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050843.1\|WP_032411914.1\|3606284_3607007_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP050843.1\|WP_004142122.1\|3621474_3622758_+\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP050843.1\|WP_167830275.1\|3620000_3621320_-\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP050843.1\|WP_021468185.1\|3614906_3616433_-\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP050843.1\|WP_020317287.1\|3608402_3609560_-\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP050843.1\|WP_002895358.1\|3618260_3618986_-\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP050843.1\|WP_004183465.1\|3625769_3626201_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|185353
NZ_CP050843.1\|WP_160552414.1\|3616429_3617368_-\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP050843.1\|WP_012737676.1\|3619047_3620004_-\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP050843.1\|WP_023282311.1\|3603552_3605574_-\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP050843.1\|WP_004147662.1\|3626734_3627820_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP050843.1\|WP_038990666.1\|3610810_3612100_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189

Protein	Function_ID	Function_description	E-value
NZ_CP050843.1\|WP_023282312.1\|3602206_3603304_+\|two-component-system-sensor-histidine-kinase-PmrB	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	0
NZ_CP050843.1\|WP_002895575.1\|3612170_3612647_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP050843.1\|WP_002895580.1\|3609556_3610597_-\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP050843.1\|WP_004142100.1\|3607663_3608419_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP050843.1\|WP_004147672.1\|3613425_3614808_-\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP050843.1\|WP_004179084.1\|3623030_3625718_-\|cation-transporting-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP050843.1\|WP_009486308.1\|3606948_3607671_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	3.26446e-105
NZ_CP050843.1\|WP_032411914.1\|3606284_3607007_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	4.71801e-74
NZ_CP050843.1\|WP_004142122.1\|3621474_3622758_+\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP050843.1\|WP_167830275.1\|3620000_3621320_-\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP050843.1\|WP_021468185.1\|3614906_3616433_-\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP050843.1\|WP_020317287.1\|3608402_3609560_-\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP050843.1\|WP_002895358.1\|3618260_3618986_-\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP050843.1\|WP_004183465.1\|3625769_3626201_-\|universal-stress-protein	gnl\|CDD\|185353	PRK15456, PRK15456, universal stress protein UspG; Provisional.	1.69931e-44
NZ_CP050843.1\|WP_160552414.1\|3616429_3617368_-\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP050843.1\|WP_012737676.1\|3619047_3620004_-\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	1.02886e-177
NZ_CP050843.1\|WP_023282311.1\|3603552_3605574_-\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP050843.1\|WP_004147662.1\|3626734_3627820_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.18674e-67
NZ_CP050843.1\|WP_038990666.1\|3610810_3612100_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0

>NZ_CP050843.1|WP_002895575.1|3612170_3612647_+|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP050843.1|WP_038990666.1|3610810_3612100_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLAFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILETIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVAAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMATLQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP050843.1|WP_002895580.1|3609556_3610597_-|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP050843.1|WP_020317287.1|3608402_3609560_-|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALADWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGEVSLGLTDSVSAIQPLIVGDNARALNLACRLRDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP050843.1|WP_004142100.1|3607663_3608419_-|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP050843.1|WP_009486308.1|3606948_3607671_-|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHSAP
>NZ_CP050843.1|WP_032411914.1|3606284_3607007_+|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALNEPLLAQWITPDPAP
>NZ_CP050843.1|WP_032411915.1|3605985_3606198_+|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPLFSVGHRKSAAPALTRPDGIGV
>NZ_CP050843.1|WP_023282311.1|3603552_3605574_-|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP050843.1|WP_023282312.1|3602206_3603304_+|two-component-system-sensor-histidine-kinase-PmrB
MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVEHEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELENRTPDNLTPIVLSESVPEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGMGVDPLIQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELEAMLAQRQQRLLLMDIENEAVVSGDATLIRVILRNLVENAHRYSPEGSTIRVSVKAGLMPVMAVEDEGPGIDEAKSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPQRGGQNVSTH
>NZ_CP050843.1|WP_004147672.1|3613425_3614808_-|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP050843.1|WP_021468185.1|3614906_3616433_-|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDIYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLARLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP050843.1|WP_160552414.1|3616429_3617368_-|urocanate-hydratase
MKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLRNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP050843.1|WP_002895358.1|3618260_3618986_-|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP050843.1|WP_012737676.1|3619047_3620004_-|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIARAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRAGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRSGKLQAVDLVEFNPLFDIDGQGARTAARVAWQIAHWWR
>NZ_CP050843.1|WP_167830275.1|3620000_3621320_-|imidazolonepropionase
MVFSHKKITFPCAIVDFTGVMKINVYTTHDKLNAMTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGSVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP050843.1|WP_004142122.1|3621474_3622758_+|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATVGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP050843.1|WP_004179084.1|3623030_3625718_-|cation-transporting-P-type-ATPase
MNTDKPGAPYYQRSVEETLASVQSSPEGISGTEAATRLQQYGENALPQKPGKPAWLRFIAHFNDVLIYVLLAAALLKAVMGHWIDMAVILAVAVVNALIGFIQESNAEKSLQSIRNMLSSEAVAIRQGNHETIPTTSLVPGDIVVIRAGDRIPADLRVIEAHNLRVEEAILTGESTVVEKTTEPLSGDLPLGDRSNLLFSGTTVSSGAGKGIVVATGGDTELGHINQMMAGIEKHRTPLLVQMDKLGKAIFILILVMMAALFVFSLLFRDMPVSELMLSLISLAVASVPEGLPAIISIILSLGVQAMARQKAIIRKLPTVETLGAMTVICSDKTGTLTMNEMTVKAVITADSVYRVEGDSYEPVGKIHAIDDPTPVTIAPGSLFERYLRTIDLCNDSQLIKEESGLWKITGGPTEGALKVLAAKVTLPPLTSELRSKIPFDSQYKYMSTLYRLGEEEVVLVTGAPDVLFRLCQYQQSDSGLQPLDLPYWEGKIEEYAREGLRMVAAAWKPAAAGQTELTHQDLQQGVILLGVAGMMDPPRPEAITAIADCLQAGIRVKMITGDHPQTAMSIGKMLGIGNAGNAITGRELEVMDDAQLSVAAQQFDIFARTSPEDKFRLVQALQSKKEIVGMTGDGVNDAPALKQADVGVAMGIKGTEVTKEAADMVLTDDNFATIASAVREGRRVYDNLKKTILFVMPTNLAQGLLIVIALLAGNVLPLTPVLILWMNMATSATLSFGLAFEAGEKNIMRRPPRDPKIHVMDGFAIWRVAFVGSMIAVSAFILEAWLQPRGYSPEFIRTVLLQTLVTAQWFYMLNCRVSDGFSLTKGLLANKGIWIVSGVLLLLQLLIIYAPFMQMLFGTTGLPFRYWVITFIIGFAMFLIVELEKPLTRKWRSA
>NZ_CP050843.1|WP_004183465.1|3625769_3626201_-|universal-stress-protein
MYKNIVVPVDVFDAGLADKALSHAKFLAQHSAGQIHLIHVIPAFSPVLTRGFISDARKMEDHLLNTAKEKLSELVKKNGLAEDASHLYVRSGNVRDQVIALADELKADVVIVGSRNPGIQTHLLGSEAANIVRYAHVPVFVVR
>NZ_CP050843.1|WP_004147662.1|3626734_3627820_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYFSLIPVVIIFTTACDQKAPTVESAPRMVKVAQVTAVGNTQQRTFPARIESGDSTELSFKRGGQVESLDIRQGASVAQGQTLARLNAREAQQRVNERQTAATLAQRQFDRFQTLAGRQAISQAEMDVQRANRDAANAALKIAREELAQMSLIAPFSGIAAGVHIRNHQVVAAGQPVITLTRTDLLDVVFSIPENLFTSLDIRNTAYRPVVRINTLPGREFTAEYKEHTGSSDNSTLTWQIVLTMPRPDDFPAVGGVSGTVTVNLGNLPASAGRETLIVPAEAVFNPDNRPKNEPVVWVVKGDNAHRYLEERKVTVGEVTSQGVAITDGLRAGEQVVAAGVSELHAGQPVRVWTRERGL

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Crispr_ID: NZ_CP050843_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050843_2

4471837-4471931

Orphan

Consensus_repeat	Method
ACTATGGTTTTTATGGTTTTTATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050843_2

>merge|NZ_CP050843|2|4471837-4471931|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATGGTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATGACTGTGGTTTTTATGGTTTTTATT

>NZ_CP050843|2|2|4471837-4471931|CRISPRCasFinder
TTAATGGTCACTATGGTTTTTATG	GTTTTTATTCGCTGAACTGCCCGGGAGTGATATATCTCTGATTTATG
ACTGTGGTTTTTATGGTTTTTATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050843.1\|WP_004145980.1\|4468930_4469590_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP050843.1\|WP_004178574.1\|4466011_4468918_+\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP050843.1\|WP_002888353.1\|4462595_4463291_+\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP050843.1\|WP_002888332.1\|4474418_4475246_-\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP050843.1\|WP_004182903.1\|4479184_4480174_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP050843.1\|WP_002888337.1\|4473687_4474386_+\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP050843.1\|WP_004147026.1\|4475489_4477838_+\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP050843.1\|WP_040226523.1\|4472072_4473698_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP050843.1\|WP_167830310.1\|4481376_4482225_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	unknown	unknown	gnl\|CDD\|273208
NZ_CP050843.1\|WP_002888320.1\|4482476_4482956_-\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP050843.1\|WP_167830309.1\|4480170_4480992_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP050843.1\|WP_002888345.1\|4470383_4471748_-\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030
NZ_CP050843.1\|WP_032420600.1\|4458883_4459054_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050843.1\|WP_040188643.1\|4459235_4460945_+\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP050843.1\|WP_004177424.1\|4460955_4462458_+\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP050843.1\|WP_002888329.1\|4477892_4479179_+\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP050843.1\|WP_002888323.1\|4480994_4481372_+\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP050843.1\|WP_002888347.1\|4469664_4470204_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP050843.1\|WP_004178576.1\|4463466_4465824_+\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP050843.1\|WP_004145972.1\|4458052_4458898_-\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717

Protein	Function_ID	Function_description	E-value
NZ_CP050843.1\|WP_004145980.1\|4468930_4469590_+\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.90078e-161
NZ_CP050843.1\|WP_004178574.1\|4466011_4468918_+\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP050843.1\|WP_002888353.1\|4462595_4463291_+\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP050843.1\|WP_002888332.1\|4474418_4475246_-\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP050843.1\|WP_004182903.1\|4479184_4480174_+\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP050843.1\|WP_002888337.1\|4473687_4474386_+\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	5.03078e-66
NZ_CP050843.1\|WP_004147026.1\|4475489_4477838_+\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP050843.1\|WP_040226523.1\|4472072_4473698_+\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	2.92093e-171
NZ_CP050843.1\|WP_167830310.1\|4481376_4482225_+\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP050843.1\|WP_002888320.1\|4482476_4482956_-\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP050843.1\|WP_167830309.1\|4480170_4480992_+\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.63968e-146
NZ_CP050843.1\|WP_002888345.1\|4470383_4471748_-\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169
NZ_CP050843.1\|WP_040188643.1\|4459235_4460945_+\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP050843.1\|WP_004177424.1\|4460955_4462458_+\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP050843.1\|WP_002888329.1\|4477892_4479179_+\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP050843.1\|WP_002888323.1\|4480994_4481372_+\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP050843.1\|WP_002888347.1\|4469664_4470204_-\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP050843.1\|WP_004178576.1\|4463466_4465824_+\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP050843.1\|WP_004145972.1\|4458052_4458898_-\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0

>NZ_CP050843.1|WP_002888345.1|4470383_4471748_-|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP050843.1|WP_002888347.1|4469664_4470204_-|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP050843.1|WP_004145980.1|4468930_4469590_+|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP050843.1|WP_004178574.1|4466011_4468918_+|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP050843.1|WP_004178576.1|4463466_4465824_+|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIDRRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP050843.1|WP_002888353.1|4462595_4463291_+|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP050843.1|WP_004177424.1|4460955_4462458_+|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP050843.1|WP_040188643.1|4459235_4460945_+|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQTVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYDDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP050843.1|WP_032420600.1|4458883_4459054_+|hypothetical-protein
MRFGHTRGSPRRYQWHQLSISIILSLSALSRLRRRWEFGEKPAQQAKKAPAACIPP
>NZ_CP050843.1|WP_004145972.1|4458052_4458898_-|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP050843.1|WP_040226523.1|4472072_4473698_+|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTSIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEAHDAS
>NZ_CP050843.1|WP_002888337.1|4473687_4474386_+|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSDREAHCFSVDEVVSAAGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP050843.1|WP_002888332.1|4474418_4475246_-|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP050843.1|WP_004147026.1|4475489_4477838_+|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP050843.1|WP_002888329.1|4477892_4479179_+|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP050843.1|WP_004182903.1|4479184_4480174_+|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRTKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP050843.1|WP_167830309.1|4480170_4480992_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLEQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP050843.1|WP_002888323.1|4480994_4481372_+|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP050843.1|WP_167830310.1|4481376_4482225_+|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSKRQKSLDEGEAVAS
>NZ_CP050843.1|WP_002888320.1|4482476_4482956_-|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR

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Crispr_ID: NZ_CP050843_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050843_3

4670010-4670175

Orphan

Consensus_repeat	Method
GAGCCCGCAGGAAGGAACGTAGGCCGGATAAGGCATGTATGCCGCCATCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050843_3

>merge|NZ_CP050843|3|4670010-4670175|CRISPRCasFinder
GAGCCCGCAGGAAGGAACGTAGGCCGGATAAGGCATGTATGCCGCCATCCGGCACTACCGCAGGTATGGAGCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGTCCTGGGGGGGAGCCCGCAGGAAGGAACGTAGGCCGGATAAGGCATTTATGCCGCCATCCGGCA

>NZ_CP050843|3|3|4670010-4670175|CRISPRCasFinder
GAGCCCGCAGGAAGGAACGTAGGCCGGATAAGGCATGTATGCCGCCATCCGGCA	CTACCGCAGGTATGGAGCCTGACCGCCCGGCGGCGCTGCGCTTGCCGGTCCTGGGGGG
GAGCCCGCAGGAAGGAACGTAGGCCGGATAAGGCATTTATGCCGCCATCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050843.1\|WP_167830341.1\|4671904_4673224_-\|xylose-isomerase	unknown	unknown	gnl\|CDD\|235487
NZ_CP050843.1\|WP_167830339.1\|4667441_4667927_+\|DUF2878-domain-containing-protein	unknown	unknown	gnl\|CDD\|378555
NZ_CP050843.1\|WP_004222324.1\|4677005_4678118_-\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP050843.1\|WP_167830340.1\|4667923_4668448_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050843.1\|WP_004229562.1\|4671763_4671877_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050843.1\|WP_002887163.1\|4668444_4668996_+\|DUF3833-domain-containing-protein	unknown	unknown	gnl\|CDD\|378992
NZ_CP050843.1\|WP_009309830.1\|4681104_4681941_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP050843.1\|WP_004153321.1\|4673649_4675089_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_CP050843.1\|WP_004152218.1\|4663528_4664248_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|180399
NZ_CP050843.1\|WP_004222322.1\|4678133_4678964_-\|glycerophosphoryl-diester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176505
NZ_CP050843.1\|WP_004222316.1\|4680241_4681108_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP050843.1\|WP_004178448.1\|4663097_4663532_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP050843.1\|WP_117031872.1\|4675147_4676827_+\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|226038
NZ_CP050843.1\|WP_167830338.1\|4665505_4666228_+\|DUF1365-domain-containing-protein	unknown	unknown	gnl\|CDD\|377778
NZ_CP050843.1\|WP_009309831.1\|4679177_4680245_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP050843.1\|WP_004192228.1\|4662136_4662865_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|185003
NZ_CP050843.1\|WP_048337336.1\|4670250_4671633_-\|carbohydrate-porin	unknown	unknown	gnl\|CDD\|367007
NZ_CP050843.1\|WP_004177588.1\|4668992_4669952_+\|DUF523-and-DUF1722-domain-containing-protein	unknown	unknown	gnl\|CDD\|225811
NZ_CP050843.1\|WP_064188810.1\|4664244_4665504_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225459
NZ_CP050843.1\|WP_021462630.1\|4666224_4667445_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|225139

Protein	Function_ID	Function_description	E-value
NZ_CP050843.1\|WP_167830341.1\|4671904_4673224_-\|xylose-isomerase	gnl\|CDD\|235487	PRK05474, PRK05474, xylose isomerase; Provisional.	0
NZ_CP050843.1\|WP_167830339.1\|4667441_4667927_+\|DUF2878-domain-containing-protein	gnl\|CDD\|378555	pfam11086, DUF2878, Protein of unknown function (DUF2878). This bacterial family of proteins has no known function. Some members annotate the proteins as the permease component of a Mn2+/Zn2+ transport system however this cannot be confirmed.	7.05355e-17
NZ_CP050843.1\|WP_004222324.1\|4677005_4678118_-\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	9.38201e-51
NZ_CP050843.1\|WP_002887163.1\|4668444_4668996_+\|DUF3833-domain-containing-protein	gnl\|CDD\|378992	pfam12915, DUF3833, Protein of unknown function (DUF3833). This is a family of uncharacterized proteins found in Proteobacteria.	6.40392e-92
NZ_CP050843.1\|WP_009309830.1\|4681104_4681941_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.28715e-54
NZ_CP050843.1\|WP_004153321.1\|4673649_4675089_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	3.14668e-127
NZ_CP050843.1\|WP_004152218.1\|4663528_4664248_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|180399	PRK06101, PRK06101, SDR family oxidoreductase.	5.71219e-85
NZ_CP050843.1\|WP_004222322.1\|4678133_4678964_-\|glycerophosphoryl-diester-phosphodiesterase	gnl\|CDD\|176505	cd08562, GDPD_EcUgpQ_like, Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI), and glycerophosphoserine (GPS), can only be hydrolyzed by UgpQ during transport at the inner side of the cytoplasmic membrane to alcohols and G3P, which is a source of phosphate. In contrast to Ca2+-dependent periplasmic phosphodiesterase GlpQ, cytosolic phosphodiesterase UgpQ requires divalent cations, such as Mg2+, Co2+, or Mn2+, for its enzyme activity.	9.85069e-37
NZ_CP050843.1\|WP_004222316.1\|4680241_4681108_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	4.268e-49
NZ_CP050843.1\|WP_004178448.1\|4663097_4663532_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	1.2167e-19
NZ_CP050843.1\|WP_117031872.1\|4675147_4676827_+\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|226038	COG3507, XynB, Beta-xylosidase [Carbohydrate transport and metabolism].	0
NZ_CP050843.1\|WP_167830338.1\|4665505_4666228_+\|DUF1365-domain-containing-protein	gnl\|CDD\|377778	pfam07103, DUF1365, Protein of unknown function (DUF1365). This family consists of several bacterial and plant proteins of around 250 residues in length. The function of this family is unknown.	8.16422e-101
NZ_CP050843.1\|WP_009309831.1\|4679177_4680245_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	3.48437e-141
NZ_CP050843.1\|WP_004192228.1\|4662136_4662865_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|185003	PRK15043, PRK15043, HTH-type transcriptional regulator MlrA.	2.00383e-65
NZ_CP050843.1\|WP_048337336.1\|4670250_4671633_-\|carbohydrate-porin	gnl\|CDD\|367007	pfam02264, LamB, LamB porin. Maltoporin (LamB protein) forms a trimeric structure which facilitates the diffusion of maltodextrins across the outer membrane of Gram-negative bacteria. The membrane channel is formed by an antiparallel beta-barrel.	6.14467e-88
NZ_CP050843.1\|WP_004177588.1\|4668992_4669952_+\|DUF523-and-DUF1722-domain-containing-protein	gnl\|CDD\|225811	COG3272, COG3272, Uncharacterized conserved protein [Function unknown].	4.25528e-75
NZ_CP050843.1\|WP_064188810.1\|4664244_4665504_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|225459	COG2907, COG2907, Predicted NAD/FAD-binding protein [General function prediction only].	3.80806e-153
NZ_CP050843.1\|WP_021462630.1\|4666224_4667445_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|225139	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane].	2.19333e-114

>NZ_CP050843.1|WP_004177588.1|4668992_4669952_+|DUF523-and-DUF1722-domain-containing-protein
MNTQPVIGISGCLTGSAVRFDGGHKRMGFVMDELAQWVAFKPVCPEMAIGLPVPRPALRLVQTPVGEIRMRFSHAPHEDVTEKMTDFASAHLATLGELSGFIVCAKSPSCGMERVRLYDEKGNRGRKEGVGLFTGALMARYPWLPVEEDGRLHDPLLRENFVERVFALHELNALRARGLTRHGLLAFHSRYKLQLLAHHQAGYREIGPFVASLHEWEDLEAFFEVYREKLMAILKQPASRKNHTNVLMHIQGYFRDQLNSRQRGELREVILNYRAGLLPILAPLTLLKHYLAEYPDRYLQAQNYFDPYPQDLALRLTVN
>NZ_CP050843.1|WP_002887163.1|4668444_4668996_+|DUF3833-domain-containing-protein
MKRILTLGLALLMLILAGCSTEVTEYRQQQPALDIFHYFQGRTEAWGMVQDRSGKQLRRFHVAIDGDVVGDTLTLHERFVYDDGEKQQRVWRIRRTGDNRYQGTAGDIEGVASGQAAGNAFHWRYSMNVEASGSRWLLHFDDWMFLQDGSHLFNKTEMKKFGITVATVTLFFTRTTAEERTAP
>NZ_CP050843.1|WP_167830340.1|4667923_4668448_+|hypothetical-protein
MRFALLLLWLTILAPAAHAADWLTWRRVGEATLTWGPFTVYHSQLRTPNGRYDGPQQDRALIITYRRDIDREALVEATRDQWQAQGILQQEPRSEAWLRMLQGVWPDVAPGSQLAFVVSGGEGQFWYRASAAQTAFTPLGPRQSAAFSTRFLAIWLDPRTTYPELRQQLIGGTP
>NZ_CP050843.1|WP_167830339.1|4667441_4667927_+|DUF2878-domain-containing-protein
MTRPAQHLLMALAFDVYWTLVVMLRERGLLIWLTLAIFAWLRLPAASRPPALLLAVAGCGLDACWALAGLIDFRGDSLLPLWMVALWLMFAVVWTRLTRTATLPGWVLATAATVGGPVAYLIGACLGAMTLLVPTALGVAAMACGWLVLMLLFHLGMGRQK
>NZ_CP050843.1|WP_021462630.1|4666224_4667445_+|class-I-SAM-dependent-methyltransferase
MTDPVFALEPDVPRNVRLARWLLFRLLSGLREGSLTVREGAQTFHFGDPAAALRAEARVCTPEVYWRLLTGGSLAAAEAWMDGDWESHQLTALLQILARNGEVLGRLERGFRLLGKPVARLRHWTRRNTRAQARENIAAHYDLGNEFYAYFLDDDLLYSSALFTDDQQDLTQAQRAKMARLCDQLALTPGDHLLEIGTGWGALAEYAARHYGCRVTTTTLSREQHRWATERMARAGLQDRVEVLLCDYRDLRGEYDKLVSVEMIEAVGQRYLPAFFRTCQARLRPGGRMALQAITIQDQRYRDYSKSVDFIQRYIFPGGFLPSITAMSELMTRHTDFVVRNLFDMGPDYARTLAHWRQRFTHAWQDIEKLGFDERFRRMWLYYFGYCEAGFNARTISVVQLTAERV
>NZ_CP050843.1|WP_167830338.1|4665505_4666228_+|DUF1365-domain-containing-protein
MNSCLYQGVLRHRRLQPKAHHFVYRLFMAWLDLDELDKLPETGIRRNRLAAAAWYDADYPLGAPLKAQVLNRLESLTGCRPAGRVMLLTQLRYFGFHFNPVNFYYCYDEADTLRWVLAEVRNTPWNERHYYAVDGQQARPLEKAFHVSPFNPMDMVYHWRFNAPGKTLHMHIENHQASKVFDATLALSRVPLTRANLRGLLVRLPLMTLKTVLAIYWQALRLWLKRVPLYNHPVSRSERS
>NZ_CP050843.1|WP_064188810.1|4664244_4665504_+|FAD-dependent-oxidoreductase
MNIAIIGSGIAGLTCAWRLAGHHQVTLFEAGATPGGHTATVDVATPQGTWAIDTGFIVYNDRTYPRFMGLLSELGIAGQKTQMSFSVHNPASGLEYNGHSLTSLFAQRRNLLKPAFWGLLSEIVRFNRLAKLALTEALDPGATLESFLTRHRFSPFFARHYILPMGAAIWSSSLQEMRRFPLPLFLRFFENHGLLDIRDRPQWYVVPGGSREYVRALLARLGDRLDLRLNAPVQQVERHPAGVILRLASGEAHFDQVIFACHSAQALAMLAAPTDSEREVLGDIGWQRNEVVLHSDPRWLPERQRAWASWNYRLSDGDRARACVTYNMNILQGLPAGAPLFCVTLNPDAPVDDRYVWQRFVYEHPLFNPQSWSAQLRREEINGQQRSWYCGAYWYNGFHEDGVRSALDVVQGIAAAEGH
>NZ_CP050843.1|WP_004152218.1|4663528_4664248_+|SDR-family-NAD(P)-dependent-oxidoreductase
MMTVLITGASSGIGAGLAKSFAADGHLVIACGRDASRLAALQQLSPNISVRLFDMTDRDACRQALTGCFADLIILCAGTCEYLDHGQVDAALVERVMATNFLGPVNCLAALQTQLEAGDRVVLVSSMAHWLPFPRAEAYGASKAALTWFANSLRLDWEPKGVAVTVVSPGFVDTPLTRKNDFAMPGRVSVDRAVAAIRHGLAKGKNHIAFPTGFSLALRLLASLPSGIQRLLLRRMVRS
>NZ_CP050843.1|WP_004178448.1|4663097_4663532_+|nuclear-transport-factor-2-family-protein
MSTSPSVIRRFVEYYAGLDAQPPAALAALYHPDATLSDPFGQHQGLFAIQRYFTHLLANVEQCRFTIDTPLCDGQRFAVTWTMHWSHPRIAGGETLALPGCSVVDIAGEQVLHQRDYYDAGEMIYEHLPLLGWAVRGVKRRVRS
>NZ_CP050843.1|WP_004192228.1|4662136_4662865_+|MerR-family-transcriptional-regulator
MPYSIGEFARLCGINATTLRAWQRRYGLLKPLRTDGGHRLYSDDDVQQALKILDWVKKGVPVSQVKPLLSRPGARRTNNWLTLQETMLQRLKEGKIESLRQLIYDAGREYPRQELVTEVLRPLRSQVSANVPAIMTLREILDGIIIAYTSFCLEGDKKAPGDNFLITGWHLTDACEIWLEALKRTGQGHRIDVLPVPPAALAPEIFPQRNWLLVTSGKLSAARQRQVELWQQQVVSLEIIPL
>NZ_CP050843.1|WP_048337336.1|4670250_4671633_-|carbohydrate-porin
MTMIKKLPLTMAVIATFFPLTSVMAQEFTQEQIDAIVAKAVDKALADRQAKIDAAANKKVDVITNPETTAASPDMAIPFGLKFSGYARYGAHFQTGDQKYVGVDGSYNGASAIGRLGNESNGGEFQISKAFKSAQGAIWDLNVMFDHWSDEVNLKKAYVGVTNVLESNPNAYLWAGRDFHQRPQQGINDYFWMNHDGQGAGVKNFDIGGVQFDVAAVSQVKSCSPEVMADETNPSRITCTGSSDTGDNGHYALTTKTHNIKAGPIDVEVYANYGFDSKAVDSDARLEAWQGGLVLSHTNDSGVNKVILRYSDNSDNSVYNKTDDLTTVYASFEGSHKFTQQAQIEYLLAFHDYDNGKDNTDNRKNYGAIVRPMYFWNDVHSTWLEAGYQRVDYDQGGDNHGWKLTLSQNIAIGMGPEFRPMLRFYVTGGQVDNEHTAKVNGTQDQQLDSLNVGGMFEAWF
>NZ_CP050843.1|WP_004229562.1|4671763_4671877_-|hypothetical-protein
MYSAVYPLPGNSVYWFVLCFFCQWRKTTCLISAKEEG
>NZ_CP050843.1|WP_167830341.1|4671904_4673224_-|xylose-isomerase
MQTYFDQVDRVRFAGPKTDNPLAFRHYNPDEIVLGKRMADHLRFAACYWHNFCWNGADMFGAGSFERPWQAAGDALEMAKRKADVAFEFFYKLNVPYYCFHDVDVSPEGASLKEYLHNFAIMTEVLAEKQQQTGVKLLWGTANCFTHPRYGAGAATNPDPEVFAWAATQVVTAMNATHQLGGENYVLWGGREGYESLLNTDLRQEREQIGRFLQMVVEHKHKIGFGGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLENEIKVNIEANHATLAGHSFHHEIASAIALGIFGSVDANRGDAQLGWDTDQFPNSVEENTLVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDMFYGHIGAMDVMALSLKLAARMIEDGKFDQGLTKRYAGWQGELGQKIMSGQMSLDNIARYAEQHNLNPQPQSGRQELLENLVNTYIFG
>NZ_CP050843.1|WP_004153321.1|4673649_4675089_+|MFS-transporter
MHSRHDEYHKLTRGERIGYGMGDFAQNLVFGTIGGFLALHMLTVNTISTATAGFIFLFVRIINVFWDPMVGTYVDKRTSKAGKYRPWLLRAGVPLVILSALLFAPIPGVKGSVAFAFIIYLALDLVYSLVNIPYGSLNASLTRDPESIDKLTSTRMMLANSANLLVYTLFPMFVQMAAPKDRSLKDTGFFGLELNLGNYTDPSANYAWFGVYAIYMIIGAVALFICYKCTKERVVATAEQTANVKTTDLFHELRHNRPLVILGMFFMLAFTFMFFMNTVNGFFNQFVVGHSEWMGAVGLVASIPGIAFPVFWPKLKKIFGKKGFFHLFLAMFIVGELLTYVWSREGMHDALWLAYIATFIKQWGLTSATGFMWALVPEVIAYGELKSGKRNAAIINAIMGLFFKIGFTIGGAIPLWLLAVYGFNESGAVQSASAIDGIIMTAVWIPIALAAISMVIMQVYPISDKHVTDINRQLDEIRV
>NZ_CP050843.1|WP_117031872.1|4675147_4676827_+|glycoside-hydrolase-family-43-protein
MSLIQNPILRGFNADPSIIRVEDTYYIANSTFEWFPGVRLHESKDLKNWNLLPSPLSTTTLLDMKGNPSSGGIWAPALSWADGQFWLVYTDVKVTEGAFKDMTNYLTTAKDIRGPWSDPIKLNGVGFDASLFHDDDGRKYIVQQTWDHREYHHPFDGITLTELDTNTLKLMPETARTIYRGTAVALVEGPHLYKLNGYYYLFAAQGGTVFTHQEVVARSKTLEADSFETEPGDVFLTNVDTPDSYIQKQGHGAQVSTPEGEWYYASLCARPWNRPGESIYDPRGWSTLGRETAIQKVYWDDEGWPRIEGGHGGKTFVEGPKDAIFTESASDNSQQDDFTSPALDPNWNTLRVPFTAKMGTTGDGKLTLIGQGSLANTHDLSLIARRWQAFYFDAAVKVKFEPFSYQQMAGLTNYYNDRHWSFVFLTWNEINGKVIEVGENNRGKYTSYLKDNAIKVPDGVEYVWFRTKVRKQTYSYEYSFDGVSFTEIPVQLDAAVLSDDYVLQSYGGFFTGAFVGLAAVDYAGYGTQAEFYQFEYQELGDRLAADGSYSWEAGETRDK
>NZ_CP050843.1|WP_004222324.1|4677005_4678118_-|ROK-family-transcriptional-regulator
MDSQSECLELRGSQRLLLELIRRHAPVTRAELARLSGLTAGAITQQCRELMFLGLVVEGERNTGQRGQPSLPLRLNPGGGCAIGLSFSPGFIDMTVVDLSGRQLLSLSEAHLENQPLSATLVQIKTLVEQTLKKRQLQHARILGIGYAVPGFLKADGRKRHCVPSLESWRDADLQQTFADNLPWPTWVENNANAAAVGELYSGEWNAYSDLTFIDLGYGIGAGIISGHKMLRGGFCNAGEVGMAFPSGTPRPSYKDLLATLDREGFTENQLPELIAEQHPLLESWFERCRGQVEQTVFGCVQWVDPQIIVLGGVMPKPIISRLVEELNQRLETRFDPNRPRVRLAASSMGVQSASRGAAMIPLYQVINEG
>NZ_CP050843.1|WP_004222322.1|4678133_4678964_-|glycerophosphoryl-diester-phosphodiesterase
MAFNFHRAAEGIVLANSHRGFSTCAPENTFPAFEAARLAGTHCIEIDVHLTVDNQLVVTHDHRIDRVSSGDGFVEEMTYLQLLACDFGMKFHPSFIGTHIPLLADVLCWAVENDMGLIVEVKQRNRHDKFVSVLVELLHEQPEAINHIQLLGFNHVLINQVKAQIPQLALQVVTLERYNNQLAAVQQSNASCVCFEFEFAHIGDLRAYKEAGLGIRMFLHEVRNGMTPLEQYDYKFGCDSRSMIIGWMQAGLIDMLSHDDIPYLQGLIEEAGLRWG
>NZ_CP050843.1|WP_009309831.1|4679177_4680245_+|ABC-transporter-ATP-binding-protein
MSKLVLEQVTKTFGEFYAAREISFCAEEGEFVTLLGPSGCGKTTLLKMIGGFHQPDSGRILIGDKTVNALPPEKRNTAMCFQSYALFPHLNVAHNICFGLKQKKATIGEQQARLAEALKQVGLESQRLKMPGQLSGGQQQRVALARAMITRPDVILFDEPLSNLDAKLRESVRFEIKELQRLYQLTSIYVTHDQAEALAMSDKIVVLNAGNVEQIGQPEEIYYRPANRFVADFIGAANIDTAQVTPAEQPGYYRVRCALGEFYVFSDRPPRAEHCYICWRPEDAQYVGQPQAGDNHFTLTLDKMAFMGNLTEAWGHNNAGLSVRLQLIKKPPIAPGERVCFRLTENAIHFLEPVS
>NZ_CP050843.1|WP_004222316.1|4680241_4681108_+|ABC-transporter-permease
MKNWRNELFAWLLMLSGLGTILLLMGSTFYVVIAQSLGWFNLEGDSHFSLEYWRNMLQDEVLQSALFYSVKVSLLGAFGSVIFAYPLALWLRKPMVGKAGIIAVLRAPMFIPGLVAAFLFVNIVAYHGIINELLLALGIISEPLRMQNDDFGWGVVILQIWKNLPLALILVGGAVNAIRNDVLDAASNLGANRWRSFTGVVVPLTLPAVQVTLILVFIGALGDFAFFSVAGPRNTYSLSRLMQATAMEYGEWNSAAVIAVIIMVTAAICTLLIALLITPFATRKGELK
>NZ_CP050843.1|WP_009309830.1|4681104_4681941_+|ABC-transporter-permease
MSHTANGRRVVTISLIFFMVANLIWLGMPFGMAILWSLVDAAHPWSYPDIFPPVLSFSRWLLVWEKTSLAEALLNSYTIAPTVAVASLLLSLPTAYAFGRMTFRGKAVAEMLTLIPLVMPGMLIGIFFSAMLLNLNIDNAFISIVIGHTVLTLPYSIRIMSAGFKAVPQDLIDASRDLGSGVWGTFSNAYLPLLKPSLLAALIFCLVRSLEEFSISYVLGAPDFITVPTILYSFLGYSFVRPDAAVVSMILVIPNVILMAIIEKLLKGNYLSQSTGKA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

645263 : 690505

Salmonella_phage(79.07%)

lysis,tRNA,integrase,terminase,plate,capsid,tail,head,portal

attL 643218:643232|attR 669360:669374

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
643218:643232	attL	NA	NA	NA	NA
WP_023317294.1\|645263_648506_-	transporter substrate-binding domain-containing protein	A0A1V0SGX0	Hokovirus	4.3e-34	33.6
WP_004174237.1\|648510_649125_-	acid-sensing system DNA-binding response regulator EvgA	NA	NA	NA	NA
WP_004900718.1\|649426_649792_+	hdeB family protein	NA	NA	NA	NA
WP_004889691.1\|649860_650133_-	hypothetical protein	NA	NA	NA	NA
WP_167830204.1\|650759_651845_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	3.1e-122	61.3
WP_167830391.1\|651848_652427_-	phage repressor protein	A0A1S6KZZ7	Salmonella_phage	1.1e-36	38.9
WP_004144798.1\|652569_652806_+	hypothetical protein	NA	NA	NA	NA
WP_065519549.1\|652840_653350_+	phage regulatory CII family protein	A0A1S6L008	Salmonella_phage	2.7e-76	83.4
WP_004174277.1\|653357_653558_+	DUF2724 domain-containing protein	A0A1S6L005	Salmonella_phage	1.5e-27	87.7
WP_004174279.1\|653521_653863_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	1.1e-49	86.7
WP_024623053.1\|653930_654164_+	DUF2732 family protein	A0A1S6L021	Salmonella_phage	3.5e-31	92.2
WP_167830205.1\|654163_654391_+	TraR/DksA family transcriptional regulator	A0A1S6L007	Salmonella_phage	2.1e-33	89.3
WP_048963752.1\|654387_655275_+	DNA adenine methylase	E5G6L8	Salmonella_phage	1.5e-111	71.1
WP_167830392.1\|655255_657661_+	replication endonuclease	A0A1S6L028	Salmonella_phage	0.0e+00	89.1
WP_004144689.1\|657832_658021_+	hypothetical protein	A0A1S6L006	Salmonella_phage	7.9e-26	98.4
WP_004185723.1\|658034_658268_+	DinI family protein	A0A1S6L014	Salmonella_phage	2.0e-31	85.7
WP_069734302.1\|658343_658601_+	hypothetical protein	NA	NA	NA	NA
WP_065804324.1\|658894_659704_+	TIGR04255 family protein	NA	NA	NA	NA
WP_142762938.1\|659723_660386_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_117079998.1\|660395_661244_+	hypothetical protein	NA	NA	NA	NA
WP_117048824.1\|661281_662313_-\|portal	phage portal protein	E5G6M3	Salmonella_phage	3.0e-175	88.0
WP_167830206.1\|662312_664076_-\|terminase	terminase ATPase subunit family protein	A0A1S6KZW3	Salmonella_phage	0.0e+00	93.2
WP_167830207.1\|664216_665050_+\|capsid	GPO family capsid scaffolding protein	A0A1S6KZW9	Salmonella_phage	2.7e-102	75.1
WP_020324020.1\|665066_666131_+\|capsid	phage major capsid protein, P2 family	E5G6M6	Salmonella_phage	1.5e-185	94.6
WP_004174300.1\|666134_666785_+\|terminase	terminase endonuclease subunit	E5G6M7	Salmonella_phage	9.6e-103	86.6
WP_167830208.1\|666881_667346_+\|head	head completion/stabilization protein	A0A1S6KZW8	Salmonella_phage	1.3e-74	85.7
WP_002896155.1\|667345_667549_+\|tail	tail protein X	A0A1S6KZY4	Salmonella_phage	1.3e-29	88.1
WP_004144702.1\|667552_667768_+	hypothetical protein	E5G6N0	Salmonella_phage	1.0e-29	88.7
WP_125482778.1\|667748_668258_+	lysozyme	E5G6N1	Salmonella_phage	1.2e-81	83.4
WP_167830209.1\|668262_668646_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	4.7e-17	42.9
WP_064146896.1\|668642_669071_+\|lysis	LysB family phage lysis regulatory protein	A0A1S6KZX8	Salmonella_phage	5.6e-51	79.4
WP_072145348.1\|669045_669204_+	hypothetical protein	A0A1S6KZX6	Salmonella_phage	2.0e-14	73.1
WP_167830210.1\|669166_669598_+\|tail	phage tail protein	A0A1S6KZY0	Salmonella_phage	1.1e-62	81.1
669360:669374	attR	NA	NA	NA	NA
WP_167830211.1\|669590_670037_+	phage virion morphogenesis protein	A0A1S6L001	Salmonella_phage	5.1e-55	73.6
WP_004174323.1\|670105_670678_+\|plate	phage baseplate assembly protein V	E5G6N6	Salmonella_phage	3.0e-76	71.7
WP_167830212.1\|670674_671037_+\|plate	baseplate assembly protein	A0A1S6KZZ4	Salmonella_phage	2.2e-48	83.9
WP_167830213.1\|671023_671932_+\|plate	baseplate assembly protein	E5G6N8	Salmonella_phage	7.6e-106	66.9
WP_167830214.1\|671924_672533_+\|tail	phage tail protein I	E5G6N9	Salmonella_phage	1.1e-57	61.6
WP_167830215.1\|672529_674521_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA
WP_117256240.1\|674520_675942_+	hypothetical protein	I6R115	Nonlabens_phage	1.0e-27	34.6
WP_004144714.1\|675954_676992_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	2.0e-33	44.8
WP_038421809.1\|677130_678303_+\|tail	phage tail sheath protein	A0A1S6KZY7	Salmonella_phage	4.3e-210	93.3
WP_064146903.1\|678312_678828_+\|tail	phage major tail tube protein	E5G6P8	Salmonella_phage	7.4e-82	85.4
WP_004144716.1\|678880_679180_+\|tail	phage tail assembly protein	E5G6P9	Salmonella_phage	1.6e-33	80.0
WP_002896220.1\|679194_679314_+\|tail	GpE family phage tail protein	E5G6Q0	Salmonella_phage	2.2e-13	87.2
WP_167830393.1\|679540_681934_+\|tail	phage tail tape measure protein	A0A2H4JGB2	uncultured_Caudovirales_phage	6.9e-106	39.2
WP_004185683.1\|681930_682416_+\|tail	phage tail protein	E5G6Q2	Salmonella_phage	4.1e-58	77.6
WP_117058047.1\|682412_683510_+	phage late control D family protein	E5G6Q3	Salmonella_phage	1.5e-172	83.8
WP_004174338.1\|683580_683799_+	hypothetical protein	Q53ZE7	Salmonella_virus	1.9e-26	72.2
WP_004144517.1\|683810_684188_-	hypothetical protein	NA	NA	NA	NA
WP_032421839.1\|684515_685022_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_004174339.1\|685121_686963_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.3e-35	33.7
WP_004149864.1\|687181_688927_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	1.6e-75	38.7
WP_001144069.1\|689038_689254_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_004185679.1\|689491_690505_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	6.3e-109	59.2

DBSCAN-SWA_2

1702264 : 1709171

Planktothrix_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004175147.1\|1702264_1703128_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.7e-10	27.5
WP_004899467.1\|1703138_1703912_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-26	36.7
WP_004151134.1\|1704154_1705051_-	lipid kinase YegS	A0A1V0SBJ0	Catovirus	6.1e-15	29.8
WP_004144192.1\|1705293_1706655_-\|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	Q6DW11	Phage_TP	1.8e-207	94.8
WP_004201558.1\|1706973_1707696_-	two-component system response regulator BaeR	W8CYM9	Bacillus_phage	8.3e-31	33.2
WP_004149058.1\|1707692_1709171_-	two-component system sensor histidine kinase BaeS	W8CYF6	Bacillus_phage	8.5e-30	28.3

DBSCAN-SWA_3

2664850 : 2675738

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167830248.1\|2664850_2667958_+	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.5
WP_167830249.1\|2668012_2669278_+	MFS transporter	NA	NA	NA	NA
WP_001620097.1\|2669308_2670397_-	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_004183954.1\|2670483_2670744_-	hypothetical protein	A0A077SK33	Escherichia_phage	3.5e-40	97.7
WP_001620095.1\|2671041_2671902_+	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_002210513.1\|2671922_2672684_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_032414898.1\|2672945_2673848_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.7e-159	99.3
WP_004190239.1\|2673859_2675125_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	3.9e-233	99.5
WP_002210516.1\|2675117_2675738_+	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0

DBSCAN-SWA_4

2878544 : 2956126

Salmonella_phage(14.63%)

integrase,terminase,capsid,tail,head,plate,portal,holin,transposase

attL 2879869:2879883|attR 2956671:2956685

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004176418.1\|2878544_2879630_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_032434417.1\|2879593_2881348_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
2879869:2879883	attL	NA	NA	NA	NA
WP_167830256.1\|2881424_2881895_-	hypothetical protein	NA	NA	NA	NA
WP_009486337.1\|2881891_2882947_-	hypothetical protein	NA	NA	NA	NA
WP_032434416.1\|2882977_2884576_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_077254776.1\|2884575_2888031_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_038990437.1\|2888027_2889236_-	hypothetical protein	NA	NA	NA	NA
WP_087652570.1\|2890683_2891782_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.4e-47	41.0
WP_004179560.1\|2891974_2892496_-	hypothetical protein	NA	NA	NA	NA
WP_015958252.1\|2892675_2893443_-	hypothetical protein	NA	NA	NA	NA
WP_167830257.1\|2893429_2893573_-	hypothetical protein	NA	NA	NA	NA
WP_072269220.1\|2893662_2894631_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-180	96.6
WP_015958251.1\|2894752_2896513_-	M23 family metallopeptidase	NA	NA	NA	NA
WP_072001616.1\|2896548_2896911_-	hypothetical protein	NA	NA	NA	NA
WP_071531918.1\|2897305_2897581_-	hypothetical protein	NA	NA	NA	NA
WP_004190533.1\|2897714_2898926_-	hypothetical protein	NA	NA	NA	NA
WP_074182940.1\|2898918_2901429_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.6e-20	33.1
WP_032434409.1\|2901430_2904085_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.3e-97	33.4
WP_002902160.1\|2904349_2904841_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_032421272.1\|2904845_2906552_-	OmpA family protein	NA	NA	NA	NA
WP_004176431.1\|2906548_2907238_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_073553528.1\|2907234_2908578_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_032427977.1\|2908587_2910132_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004176434.1\|2910174_2910666_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_032410964.1\|2910824_2910947_-	hypothetical protein	NA	NA	NA	NA
WP_019705237.1\|2911511_2911760_+	DinI-like family protein	S5MQI1	Escherichia_phage	1.0e-25	70.4
WP_032429381.1\|2912167_2912590_-	hypothetical protein	K7P834	Enterobacteria_phage	4.3e-27	46.1
WP_167830258.1\|2912667_2913099_-	recombinase family protein	A0A286S1P7	Klebsiella_phage	6.1e-29	68.6
WP_167830259.1\|2913198_2914620_-	hypothetical protein	I6S6R9	Nonlabens_phage	1.3e-24	34.9
WP_107318781.1\|2914619_2916569_-	hypothetical protein	A0A1I9SEN3	Klebsiella_phage	1.5e-18	52.0
WP_107318758.1\|2916742_2917705_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.2e-08	32.7
WP_159068230.1\|2917722_2918607_-	hypothetical protein	NA	NA	NA	NA
WP_047719060.1\|2918638_2919316_-	YmfQ family protein	NA	NA	NA	NA
WP_107318759.1\|2919312_2920461_-\|plate	baseplate J/gp47 family protein	J9QE72	Clostridium_phage	6.0e-07	29.3
WP_047719064.1\|2920450_2920900_-	hypothetical protein	A0A0C4UR04	Shigella_phage	3.6e-16	40.5
WP_094089153.1\|2920896_2921478_-\|plate	phage baseplate assembly protein	NA	NA	NA	NA
WP_107318760.1\|2921474_2922560_-\|tail	phage tail protein	Q8SBG7	Shigella_phage	1.5e-39	30.6
WP_047719069.1\|2922556_2923957_-	hypothetical protein	A0A2P9JZK2	Alteromonadaceae_phage	4.0e-05	39.1
WP_107318761.1\|2924003_2925857_-	hypothetical protein	A0A172JGI1	Citrobacter_phage	1.8e-21	45.3
WP_047719073.1\|2925998_2926277_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_107318762.1\|2926278_2926650_-\|tail	phage tail protein	NA	NA	NA	NA
WP_065954088.1\|2926653_2928165_-\|tail	phage tail protein	B5TK67	Pseudomonas_phage	3.7e-105	44.8
WP_047719076.1\|2928161_2928347_-	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_065954087.1\|2928349_2928895_-	ATP-binding protein	NA	NA	NA	NA
WP_049267342.1\|2928891_2929251_-	hypothetical protein	NA	NA	NA	NA
WP_107318763.1\|2929255_2929636_-	hypothetical protein	NA	NA	NA	NA
WP_021543308.1\|2929637_2930687_-\|capsid	major capsid protein	V5Q8G6	Xylella_phage	1.2e-51	34.0
WP_047719081.1\|2930785_2931193_-\|head	head decoration protein	NA	NA	NA	NA
WP_047719083.1\|2931192_2931786_-	hypothetical protein	NA	NA	NA	NA
WP_047719084.1\|2931787_2932654_-	S49 family peptidase	A0A2D1GN02	Marinobacter_phage	6.2e-49	37.9
WP_047719086.1\|2932650_2934285_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	6.8e-89	35.1
WP_000483310.1\|2934284_2934548_-\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_167830260.1\|2934556_2936683_-\|terminase	terminase	A0A2K9V3X4	Faecalibacterium_phage	4.7e-98	35.9
WP_107318765.1\|2936624_2937188_-	hypothetical protein	NA	NA	NA	NA
WP_107318782.1\|2937437_2938076_-	hypothetical protein	NA	NA	NA	NA
WP_068815315.1\|2938262_2938652_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	1.1e-24	50.0
WP_107318783.1\|2938648_2939146_-	lysozyme	K7P7Q3	Enterobacteria_phage	2.8e-78	84.2
WP_012542609.1\|2939123_2939393_-\|holin	holin	K7P6H9	Enterobacteria_phage	2.8e-32	78.3
WP_142721747.1\|2940079_2940199_+	small membrane protein	NA	NA	NA	NA
WP_032692691.1\|2940236_2940386_-	hypothetical protein	NA	NA	NA	NA
WP_071888089.1\|2940388_2941156_-	hypothetical protein	A0A1B2I9V6	Erwinia_phage	8.9e-108	75.9
WP_038992047.1\|2941889_2942468_-	DUF1133 family protein	A0A0U2S606	Escherichia_phage	7.6e-51	57.2
WP_107318766.1\|2942481_2943462_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	6.4e-135	66.9
WP_000779146.1\|2943474_2943852_-	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
WP_107318767.1\|2943861_2944671_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	2.7e-110	69.7
WP_107318768.1\|2944667_2945636_-	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	3.5e-85	66.0
WP_004184738.1\|2945625_2945805_-	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	1.6e-15	75.0
WP_107318769.1\|2946042_2946504_-	hypothetical protein	K7PJS5	Enterobacterial_phage	1.2e-67	85.5
WP_016530206.1\|2946529_2946727_-	hypothetical protein	H9C161	Pectobacterium_phage	2.7e-16	66.1
WP_032408726.1\|2946831_2947479_+	helix-turn-helix domain-containing protein	H9C160	Pectobacterium_phage	9.3e-74	63.0
WP_107318770.1\|2948026_2948326_+	hypothetical protein	NA	NA	NA	NA
WP_040186298.1\|2948325_2949111_+	hypothetical protein	C7BGF1	Burkholderia_phage	2.9e-61	51.8
WP_025714330.1\|2949238_2949547_+	hypothetical protein	NA	NA	NA	NA
WP_107318771.1\|2949559_2950150_+	hypothetical protein	H2BD37	Pseudomonas_phage	2.8e-24	54.8
WP_107318772.1\|2950149_2950377_+	hypothetical protein	NA	NA	NA	NA
WP_167830199.1\|2950783_2951089_+	hypothetical protein	A0A0N7KZ94	Stx2-converting_phage	7.3e-13	69.8
WP_004198245.1\|2951161_2951308_+	hypothetical protein	A0A1B5FPC2	Escherichia_phage	2.9e-15	70.8
WP_077255525.1\|2951267_2951510_+	AlpA family transcriptional regulator	A0A0M4RTZ2	Salmonella_phage	2.2e-20	73.8
WP_040186739.1\|2951490_2952672_-\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	1.3e-201	84.2
WP_016197745.1\|2952868_2953417_+	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_032434403.1\|2953615_2955148_-	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	1.5e-21	30.0
WP_032434401.1\|2955364_2956126_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.4e-20	32.1
2956671:2956685	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2996482 : 3044944

Klebsiella_phage(21.57%)

holin,integrase,tail,terminase

attL 2988827:2988842|attR 3042250:3042265

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2988827:2988842	attL	NA	NA	NA	NA
WP_065811872.1\|2996482_2997883_-	hypothetical protein	W6E8G0	Rhizobium_phage	1.2e-22	34.9
WP_167830261.1\|2998012_3000001_-	right-handed parallel beta-helix repeat-containing protein	A0A286S1R8	Klebsiella_phage	2.8e-12	74.5
WP_038992568.1\|3000077_3003146_-	kinase	A0A286S259	Klebsiella_phage	0.0e+00	97.8
WP_038992566.1\|3003142_3003523_-	hypothetical protein	A0A286S2A6	Klebsiella_phage	1.9e-71	98.4
WP_038992564.1\|3003532_3004015_-	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	1.3e-80	94.4
WP_038992562.1\|3004195_3004660_-	hypothetical protein	A0A286S298	Klebsiella_phage	8.7e-58	67.8
WP_038992560.1\|3004659_3007551_-\|tail	tail protein	A0A2H4J107	uncultured_Caudovirales_phage	4.6e-104	33.0
WP_023313119.1\|3007670_3008003_-	hypothetical protein	M1PRT9	Cellulophaga_phage	3.8e-31	66.7
WP_074182938.1\|3008069_3008267_-	hypothetical protein	NA	NA	NA	NA
WP_038992558.1\|3008404_3008887_-	hypothetical protein	NA	NA	NA	NA
WP_167830262.1\|3008940_3010113_-	Ig domain-containing protein	A0A0D4DBN5	Acinetobacter_phage	9.4e-24	27.0
WP_023282426.1\|3010136_3010529_-	hypothetical protein	NA	NA	NA	NA
WP_038992555.1\|3010525_3011077_-	hypothetical protein	G8C7Q1	Escherichia_phage	5.9e-29	39.1
WP_023282424.1\|3011078_3011462_-	hypothetical protein	A0A0S2SYG4	Pseudomonas_phage	9.2e-21	45.2
WP_016946677.1\|3011448_3011682_-	hypothetical protein	A0A2H4J0Y9	uncultured_Caudovirales_phage	5.8e-10	47.1
WP_004190649.1\|3011691_3011946_-	hypothetical protein	J9Q7U0	Salmonella_phage	8.0e-21	52.4
WP_004217348.1\|3011947_3012343_-	hypothetical protein	A0A1B1P9F2	Acinetobacter_phage	4.3e-13	38.5
WP_142689607.1\|3012383_3012656_-	hypothetical protein	NA	NA	NA	NA
WP_032427966.1\|3012664_3013618_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	1.4e-131	74.0
WP_038992554.1\|3013628_3014420_-	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	4.1e-63	60.6
WP_038992553.1\|3014504_3015617_-	phage Mu F like family protein	I6PD76	Cronobacter_phage	6.2e-110	55.2
WP_167830263.1\|3015600_3017001_-	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	9.2e-127	52.7
WP_038992550.1\|3017000_3018308_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	2.7e-149	58.9
WP_038992548.1\|3018285_3019281_-\|terminase	terminase small subunit	Q5QF76	Pseudomonas_virus	1.7e-34	43.8
WP_038421382.1\|3019839_3020085_-	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-34	97.5
WP_125046916.1\|3020519_3020732_-	hypothetical protein	A0A286N2Q9	Klebsiella_phage	6.0e-22	71.4
WP_032429431.1\|3021043_3021319_-	hypothetical protein	G8C7W1	Escherichia_phage	2.3e-21	65.2
WP_004190674.1\|3021315_3021660_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_004184488.1\|3021656_3022196_-	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.3e-102	100.0
WP_031281240.1\|3022192_3022492_-\|holin	holin	A0A286N2Q5	Klebsiella_phage	1.9e-45	98.0
WP_038991419.1\|3023105_3023552_+	hypothetical protein	NA	NA	NA	NA
WP_072039931.1\|3023457_3023685_-	hypothetical protein	A0A286N2Q3	Klebsiella_phage	7.3e-34	98.7
WP_038991418.1\|3023867_3024650_-	molecular chaperone	F1C595	Cronobacter_phage	3.2e-113	78.7
WP_004190680.1\|3024646_3025015_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.5e-41	63.8
WP_038991417.1\|3025011_3025308_-	DUF1364 domain-containing protein	A0A0U2KD41	Escherichia_phage	1.0e-35	71.9
WP_016946309.1\|3025516_3026113_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	1.3e-90	80.1
WP_004184503.1\|3026491_3026725_-	DinI-like family protein	K7PM44	Enterobacteria_phage	2.9e-25	68.8
WP_032413665.1\|3027477_3027777_-	hypothetical protein	NA	NA	NA	NA
WP_038991414.1\|3027872_3028301_-	hypothetical protein	NA	NA	NA	NA
WP_020804600.1\|3028304_3028526_-	hypothetical protein	A9YWV3	Burkholderia_phage	1.3e-11	49.4
WP_020804604.1\|3028522_3028777_-	hypothetical protein	S5MQM0	Escherichia_phage	1.4e-09	50.6
WP_020804603.1\|3028769_3028973_-	hypothetical protein	A0A2R2Z313	Escherichia_phage	3.8e-26	84.8
WP_032438549.1\|3028969_3029755_-	hypothetical protein	C7BGF1	Burkholderia_phage	7.3e-65	53.7
WP_032417027.1\|3029747_3030083_-	DUF977 family protein	H6WRX9	Salmonella_phage	1.3e-10	43.0
WP_032417026.1\|3030090_3030840_-	ATP-binding protein	H6WRX8	Salmonella_phage	1.3e-119	83.1
WP_032417025.1\|3030842_3031757_-	DNA-binding protein	V5URT9	Shigella_phage	1.0e-89	54.1
WP_020804480.1\|3031771_3031960_-	ClpX C4-type zinc finger	NA	NA	NA	NA
WP_023287506.1\|3032047_3032584_-	bacteriophage regulatory protein CII	K7PJT7	Enterobacteria_phage	2.1e-63	70.4
WP_029503646.1\|3032586_3032820_-	Rha family transcriptional regulator	A0A0M4QX15	Salmonella_phage	2.1e-20	61.6
WP_004190707.1\|3032924_3033320_+	helix-turn-helix transcriptional regulator	K7PM35	Enterobacteria_phage	3.1e-48	74.0
WP_136085610.1\|3033337_3033436_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_020805737.1\|3034580_3034784_-	hypothetical protein	A0A192Y6Q5	Salmonella_phage	6.3e-21	76.1
WP_158423358.1\|3035148_3035379_-	hypothetical protein	NA	NA	NA	NA
WP_020804303.1\|3035672_3035864_+	YebW family protein	NA	NA	NA	NA
WP_020804294.1\|3035872_3036028_+	hypothetical protein	K7P7H7	Enterobacteria_phage	5.7e-14	71.2
WP_038991407.1\|3036165_3039264_+	exodeoxyribonuclease	H6WRX1	Salmonella_phage	8.2e-293	55.5
WP_032421692.1\|3039276_3040386_+	recombinase RecT	H6WRX0	Salmonella_phage	9.1e-186	87.0
WP_022631172.1\|3040426_3040666_+	DUF4060 family protein	M9P0E0	Enterobacteria_phage	6.8e-22	67.5
WP_071844645.1\|3040675_3040990_+	hypothetical protein	K7PM28	Enterobacteria_phage	2.1e-10	50.8
WP_052263199.1\|3040886_3042116_-\|integrase	site-specific integrase	K7PGY1	Enterobacteria_phage	6.2e-119	51.3
WP_004151901.1\|3042250_3043141_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
3042250:3042265	attR	NA	NA	NA	NA
WP_004140266.1\|3043140_3044133_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	3.0e-07	27.2
WP_004140269.1\|3044134_3044944_+	peptide ABC transporter ATP-binding protein SapF	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	28.9

DBSCAN-SWA_6

3160308 : 3239659

Enterobacteria_phage(22.5%)

tRNA,protease,integrase,terminase,tail,portal,holin

attL 3205060:3205074|attR 3236796:3236810

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004892876.1\|3160308_3160809_+\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
WP_002901080.1\|3160925_3161372_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_004140469.1\|3161355_3162150_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_020324105.1\|3162257_3163433_+	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140471.1\|3163464_3164157_-	CTP synthase	NA	NA	NA	NA
WP_004150778.1\|3164302_3164812_+	DUF523 domain-containing protein	NA	NA	NA	NA
WP_014343000.1\|3164816_3165155_+	DUF488 family protein	NA	NA	NA	NA
WP_004176548.1\|3165144_3165384_-	DUF333 domain-containing protein	NA	NA	NA	NA
WP_004176549.1\|3165684_3166698_+	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
WP_004150782.1\|3166755_3166857_+	YoaK family small membrane protein	NA	NA	NA	NA
WP_004213093.1\|3166856_3166931_+	protein YoaJ	NA	NA	NA	NA
WP_004140488.1\|3167048_3167174_+	hypothetical protein	NA	NA	NA	NA
WP_004140489.1\|3167233_3167497_-	DUF2534 family protein	NA	NA	NA	NA
WP_004150783.1\|3167627_3168266_-	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004148038.1\|3168355_3169270_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004148037.1\|3169731_3169851_-	hypothetical protein	NA	NA	NA	NA
WP_004150784.1\|3169931_3170975_-	type II asparaginase	NA	NA	NA	NA
WP_004224183.1\|3171277_3172486_+	HD domain-containing protein	NA	NA	NA	NA
WP_019705575.1\|3172559_3174344_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004150788.1\|3174350_3175241_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004140497.1\|3175361_3176870_+	UbiD family decarboxylase	NA	NA	NA	NA
WP_032410895.1\|3176903_3177068_+	hypothetical protein	NA	NA	NA	NA
WP_004150790.1\|3177180_3177867_-	EAL domain-containing protein	NA	NA	NA	NA
WP_004140501.1\|3178264_3178444_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|3178483_3179116_-	DNA-binding protein	NA	NA	NA	NA
WP_032434340.1\|3179682_3179880_+	hypothetical protein	NA	NA	NA	NA
WP_004183659.1\|3179995_3181006_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_032434338.1\|3181002_3182409_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004179357.1\|3182464_3183352_-	manganese catalase family protein	NA	NA	NA	NA
WP_004140514.1\|3183368_3183875_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004148027.1\|3183901_3184396_-	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004150795.1\|3184486_3184672_-	general stress protein	NA	NA	NA	NA
WP_167830266.1\|3184891_3185227_+	hypothetical protein	NA	NA	NA	NA
WP_004140529.1\|3185294_3186488_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_004140530.1\|3186600_3186828_+	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_032434336.1\|3187277_3187601_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004190914.1\|3187593_3187986_+	hypothetical protein	NA	NA	NA	NA
WP_004140538.1\|3187982_3188696_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004892953.1\|3188968_3189121_-	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_023342882.1\|3189275_3190772_-\|tail	tail fiber domain-containing protein	A0A0P0IDN1	Klebsiella_phage	5.6e-130	65.4
WP_023342883.1\|3190833_3199650_-	DUF1983 domain-containing protein	Q6UAW1	Klebsiella_phage	0.0e+00	43.2
WP_167830267.1\|3199712_3200303_-\|tail	tail assembly protein	K7PHE5	Enterobacteria_phage	9.4e-81	76.5
WP_023342884.1\|3200334_3201045_-	hypothetical protein	Q6UAW4	Klebsiella_phage	1.1e-136	90.7
WP_016530342.1\|3201046_3201802_-\|tail	phage minor tail protein L	Q6UAW5	Klebsiella_phage	1.3e-130	84.1
WP_023342885.1\|3201798_3202146_-\|tail	phage tail protein	K7PJT2	Enterobacteria_phage	4.7e-40	67.8
WP_023342886.1\|3202150_3205294_-\|tail	phage tail tape measure protein	E4WL33	Enterobacteria_phage	0.0e+00	73.1
3205060:3205074	attL	NA	NA	NA	NA
WP_071609142.1\|3205277_3205592_-\|tail	phage tail assembly protein T	E4WL32	Enterobacteria_phage	5.0e-41	75.0
WP_072216832.1\|3205612_3206041_-\|tail	phage minor tail protein G	M9NZD7	Enterobacteria_phage	2.7e-37	60.0
WP_016530349.1\|3206051_3206795_-\|tail	phage tail protein	K7PKX6	Enterobacterial_phage	1.7e-111	83.0
WP_016530350.1\|3206803_3207205_-\|tail	minor tail family protein	K7PHM6	Enterobacterial_phage	2.7e-55	75.6
WP_016530351.1\|3207201_3207780_-\|tail	phage tail protein	K7PMB7	Enterobacterial_phage	1.7e-79	81.2
WP_023342887.1\|3207783_3208059_-	hypothetical protein	K7PH43	Enterobacteria_phage	1.1e-23	57.1
WP_016530353.1\|3208051_3208378_-	DUF2190 family protein	K7PJY3	Enterobacterial_phage	8.1e-34	66.7
WP_032428174.1\|3208461_3210489_-\|protease	Clp protease ClpP	K7PKX4	Enterobacterial_phage	0.0e+00	82.1
WP_023342889.1\|3210433_3211936_-\|portal	phage portal protein	K7PHM5	Enterobacterial_phage	2.8e-246	83.0
WP_023342890.1\|3211935_3212148_-	hypothetical protein	A5LH28	Enterobacteria_phage	2.9e-24	80.0
WP_040234925.1\|3212144_3214247_-\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	0.0e+00	84.0
WP_023342892.1\|3214246_3214735_-	DUF1441 family protein	K7PJY2	Enterobacterial_phage	1.3e-72	87.7
WP_032417434.1\|3214966_3215386_-	hypothetical protein	Q6UAS0	Klebsiella_phage	1.1e-40	61.3
WP_023342894.1\|3215385_3215703_-	hypothetical protein	NA	NA	NA	NA
WP_017898986.1\|3217751_3218102_-	hypothetical protein	R9TPM9	Aeromonas_phage	1.8e-10	39.8
WP_064824462.1\|3218098_3218596_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	1.3e-78	84.6
WP_017880269.1\|3218595_3218811_-\|holin	holin	A5LH82	Enterobacteria_phage	7.9e-30	87.3
WP_023342896.1\|3220234_3220837_-	hypothetical protein	H9C175	Pectobacterium_phage	2.4e-76	68.1
WP_023342897.1\|3220853_3221885_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.1e-96	49.3
WP_023342898.1\|3222084_3222477_-	hypothetical protein	K7PHB4	Enterobacterial_phage	4.7e-12	36.6
WP_077253592.1\|3222517_3222808_-	hypothetical protein	H6WRY6	Salmonella_phage	1.4e-16	56.9
WP_023342900.1\|3222819_3223053_-	DinI family protein	K7PM44	Enterobacteria_phage	2.1e-23	68.4
WP_048975050.1\|3223680_3224499_+	hypothetical protein	NA	NA	NA	NA
WP_048975055.1\|3225465_3227232_-	AIPR family protein	D0UIM0	Aggregatibacter_phage	9.1e-71	33.2
WP_048975057.1\|3227427_3227868_-	PerC family transcriptional regulator	NA	NA	NA	NA
WP_075253243.1\|3227881_3228346_-	replication protein	A0A0U2JGJ0	Escherichia_phage	5.9e-62	68.6
WP_065811835.1\|3228338_3229322_-	hypothetical protein	A0A0U2RT81	Escherichia_phage	4.3e-46	56.4
WP_017898969.1\|3229373_3229928_-	hypothetical protein	NA	NA	NA	NA
WP_004147982.1\|3229930_3230152_-	Cro/Cl family transcriptional regulator	H6WRX5	Salmonella_phage	1.2e-28	75.3
WP_064081464.1\|3230287_3230677_+	transcriptional regulator	H6WRX4	Salmonella_phage	3.2e-37	64.3
WP_016160636.1\|3231494_3231689_+	DUF1482 family protein	NA	NA	NA	NA
WP_014228879.1\|3231731_3232076_+	transcriptional regulator	NA	NA	NA	NA
WP_064184756.1\|3232217_3234356_+	exonuclease	S4TNL0	Salmonella_phage	5.0e-100	43.0
WP_012542206.1\|3234408_3234654_+	excisionase	NA	NA	NA	NA
WP_014228877.1\|3234634_3235762_+\|integrase	tyrosine-type recombinase/integrase	O21925	Phage_21	3.3e-119	58.4
WP_004150800.1\|3235879_3237130_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
3236796:3236810	attR	NA	NA	NA	NA
WP_032434335.1\|3237370_3238021_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150802.1\|3238037_3238496_+	NUDIX hydrolase	NA	NA	NA	NA
WP_004150803.1\|3238552_3239659_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA

DBSCAN-SWA_7

3476312 : 3485775

Brazilian_cedratvirus(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_032434221.1\|3476312_3478034_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.5e-14	34.3
WP_002898014.1\|3478078_3478780_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_001040187.1\|3479133_3479352_+	translation initiation factor IF-1	NA	NA	NA	NA
WP_002896522.1\|3479471_3481751_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_002896520.1\|3481781_3482099_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896516.1\|3482424_3482646_+	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_004150848.1\|3482722_3484663_-	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_004191152.1\|3484659_3485775_-	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7

DBSCAN-SWA_8

3970000 : 4016188

Cronobacter_phage(23.53%)

tRNA,head,terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064141438.1\|3970000_3972478_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	5.1e-197	45.1
WP_038989545.1\|3972464_3972860_-	hypothetical protein	F1C5F2	Cronobacter_phage	1.2e-36	56.3
WP_004178860.1\|3972856_3973327_-	hypothetical protein	R9TPR6	Aeromonas_phage	9.6e-28	40.4
WP_038989546.1\|3973326_3973803_-	hypothetical protein	A0A2P1MXB5	Escherichia_phage	6.7e-37	48.4
WP_038989547.1\|3973845_3977241_-	tape measure protein	Q5G8W8	Enterobacteria_phage	0.0e+00	74.4
WP_032428681.1\|3977300_3977714_-	hypothetical protein	NA	NA	NA	NA
WP_023297299.1\|3977811_3978192_-	hypothetical protein	NA	NA	NA	NA
WP_023297298.1\|3978308_3978824_-	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	5.0e-62	70.7
WP_038989548.1\|3979040_3979754_-	hypothetical protein	G0ZNE7	Cronobacter_phage	1.2e-61	52.8
WP_038989549.1\|3979822_3980587_-	immunoglobulin domain-containing protein	G0ZNE6	Cronobacter_phage	2.3e-39	42.2
WP_038989550.1\|3980646_3980868_-	hypothetical protein	NA	NA	NA	NA
WP_038989551.1\|3980870_3981254_-	hypothetical protein	A0A0M3LTB0	Mannheimia_phage	6.4e-06	30.9
WP_038989552.1\|3981250_3981619_-	hypothetical protein	F1C5E3	Cronobacter_phage	8.5e-48	82.8
WP_038989553.1\|3981621_3981984_-	hypothetical protein	A0A0M3LSC9	Mannheimia_phage	1.6e-19	48.3
WP_032443486.1\|3981983_3982157_-	hypothetical protein	I6R0P9	Salmonella_phage	5.1e-11	49.1
WP_032443487.1\|3982156_3982540_-	hypothetical protein	F1C5E2	Cronobacter_phage	2.3e-48	76.4
WP_038989554.1\|3982542_3982797_-	hypothetical protein	NA	NA	NA	NA
WP_038989555.1\|3982806_3983904_-	hypothetical protein	F1C5E1	Cronobacter_phage	3.6e-150	73.0
WP_038989556.1\|3983915_3984347_-	hypothetical protein	F1C5E0	Cronobacter_phage	1.4e-41	60.8
WP_167830281.1\|3984350_3985715_-	DUF2213 domain-containing protein	F1C5D9	Cronobacter_phage	1.9e-164	65.0
WP_167830282.1\|3985786_3986755_-\|transposase	IS5-like element IS903 family transposase	A0A1B0VFY5	Salmonella_phage	2.6e-181	97.8
WP_052263182.1\|3987108_3988134_-\|head	phage head morphogenesis protein	F1C5D8	Cronobacter_phage	1.1e-116	69.8
WP_038989559.1\|3988096_3989518_-	DUF1073 domain-containing protein	F1C5D7	Cronobacter_phage	1.6e-182	69.3
WP_038989560.1\|3989529_3991089_-\|terminase	terminase	G8C7P3	Escherichia_phage	4.5e-292	88.4
WP_038989561.1\|3991085_3991574_-	DUF2280 domain-containing protein	I6S1P9	Salmonella_phage	3.9e-48	74.4
WP_038989597.1\|3991604_3992252_-	hypothetical protein	I6S676	Salmonella_phage	8.1e-94	76.8
WP_087842501.1\|3992360_3993353_+	acyltransferase	C6ZR20	Salmonella_phage	1.2e-06	25.3
WP_038989563.1\|3993420_3993705_-	hypothetical protein	G8C7W3	Escherichia_phage	4.1e-26	64.9
WP_167830283.1\|3994392_3994548_-	phage antirepressor protein	Q5MBW0	Stx1-converting_phage	3.2e-17	82.4
WP_038989565.1\|3995461_3995851_-	DUF2570 domain-containing protein	A0A192Y6H8	Salmonella_phage	4.5e-23	48.4
WP_038989566.1\|3995847_3996345_-	lysozyme	A0A1V0E5Q7	Salmonella_phage	5.1e-80	85.5
WP_032729783.1\|3996322_3996526_-	hypothetical protein	I6R0S9	Salmonella_phage	1.0e-26	84.1
WP_038989567.1\|3997252_3997942_-	antiterminator	I6PDF8	Cronobacter_phage	8.4e-57	53.2
WP_087842500.1\|3997938_3998079_-	YlcG family protein	NA	NA	NA	NA
WP_038989568.1\|3998075_3998306_-	hypothetical protein	NA	NA	NA	NA
WP_038989569.1\|3998302_3998941_-	bacteriophage Lambda NinG protein	H6WRY9	Salmonella_phage	2.7e-73	68.4
WP_038989570.1\|3998933_3999104_-	hypothetical protein	G8C7V4	Escherichia_phage	7.4e-15	73.2
WP_038989571.1\|3999103_3999559_-	hypothetical protein	K7P7B8	Enterobacteria_phage	4.7e-56	69.5
WP_072039913.1\|3999839_4000061_-	hypothetical protein	NA	NA	NA	NA
WP_038989572.1\|4000053_4000359_-	hypothetical protein	K7PJS3	Enterobacterial_phage	3.3e-29	63.0
WP_052263183.1\|4000355_4001015_-	hypothetical protein	A0A248SKW5	Klebsiella_phage	3.5e-12	39.7
WP_038989573.1\|4001011_4001527_-	hypothetical protein	A0A0P0ZBM8	Stx2-converting_phage	6.5e-70	75.8
WP_052263184.1\|4001526_4002090_-	hypothetical protein	Q5G8U8	Enterobacteria_phage	2.2e-07	34.9
WP_102047170.1\|4002318_4002846_-	hypothetical protein	G8C7U8	Escherichia_phage	7.9e-31	47.3
WP_038989574.1\|4003063_4003363_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_038989575.1\|4003359_4004229_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	5.8e-95	68.9
WP_038989576.1\|4004213_4005068_-	replication protein	K7PGT1	Enterobacteria_phage	2.8e-62	54.8
WP_001548453.1\|4005153_4005375_-	hypothetical protein	G8EYH8	Enterobacteria_phage	6.9e-05	41.7
WP_004178811.1\|4005414_4005648_-	helix-turn-helix domain-containing protein	A0A2H4FNF3	Salmonella_phage	3.0e-22	70.4
WP_072039915.1\|4005752_4006442_+	helix-turn-helix transcriptional regulator	Q76H56	Enterobacteria_phage	1.6e-87	71.1
WP_038989577.1\|4006734_4007277_+	hypothetical protein	NA	NA	NA	NA
WP_038989578.1\|4007264_4008041_+	DUF1828 domain-containing protein	NA	NA	NA	NA
WP_012542634.1\|4008075_4008252_-	hypothetical protein	NA	NA	NA	NA
WP_074182943.1\|4008558_4008684_+	hypothetical protein	NA	NA	NA	NA
WP_004151303.1\|4008676_4008871_+	hypothetical protein	NA	NA	NA	NA
WP_038989579.1\|4008959_4009244_+	host nuclease inhibitor GamL	G8C7T1	Escherichia_phage	2.0e-28	61.7
WP_038989580.1\|4009260_4010007_+	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	8.2e-66	68.3
WP_038989581.1\|4010003_4010627_+	exonuclease	A0A0S2SY31	Pseudomonas_phage	1.1e-58	60.2
WP_038989603.1\|4010655_4011183_+	phage N-6-adenine-methyltransferase	Q9ZWX6	Enterobacteria_phage	2.9e-57	62.2
WP_038989582.1\|4011179_4011398_+	hypothetical protein	A0A1I9LJM7	Stx_converting_phage	2.1e-09	47.2
WP_038989583.1\|4011399_4011618_+	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	2.0e-12	51.4
WP_029497251.1\|4011617_4011857_+	DUF4222 domain-containing protein	Q6H9Z8	Enterobacteria_phage	2.4e-11	47.4
WP_071531921.1\|4011869_4012205_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004143017.1\|4013676_4014543_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_004143016.1\|4014544_4014757_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_032434111.1\|4014802_4016188_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	7.9e-46	35.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050844

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP050843

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection