CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050919	Lactobacillus fermentum strain HFD1 chromosome, complete genome	2 crisprs	cas14j,cas3,DEDDh,cas9,cas1,cas2,csn2,csa3,WYL,DinG	1	5	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050919_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050919_1

807914-808034

Orphan

Consensus_repeat	Method
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050919_1

>merge|NZ_CP050919|1|807914-808034|CRISPRCasFinder
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATCTGGGCCTAGAATAAAAAGTGTACAAGTTAATTAGAGACTCTGATTTAGTATAATTAAGGAAGTAAATTGGAGGATC

>NZ_CP050919|1|1|807914-808034|CRISPRCasFinder
TAGAGACTCTGATTTAGTATAATTAATGAAGTAAATTGGAGGATC	TGGGCCTAGAATAAAAAGTGTACAAGTTAAT
TAGAGACTCTGATTTAGTATAATTAAGGAAGTAAATTGGAGGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050919.1\|WP_081540415.1\|808350_809229_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP050919.1\|WP_003685171.1\|803603_803957_-\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|377753
NZ_CP050919.1\|WP_048340331.1\|806373_807774_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP050919.1\|WP_024271704.1\|802295_803258_+\|ketopantoate-reductase-family-protein	unknown	unknown	gnl\|CDD\|224805
NZ_CP050919.1\|WP_168183445.1\|816537_817104_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234996
NZ_CP050919.1\|WP_054173465.1\|808039_808327_+\|transposase	unknown	unknown	gnl\|CDD\|225511
NZ_CP050919.1\|WP_048340330.1\|804755_806084_-\|D-serine-ammonia-lyase	unknown	unknown	gnl\|CDD\|235096
NZ_CP050919.1\|WP_023465770.1\|815775_816324_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|237288
NZ_CP050919.1\|WP_003681906.1\|810069_810435_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050919.1\|WP_070446815.1\|796584_797571_+\|LacI-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP050919.1\|WP_003681899.1\|814209_815370_+\|molecular-chaperone-DnaJ	unknown	unknown	gnl\|CDD\|237653
NZ_CP050919.1\|WP_168183444.1\|794732_796427_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472
NZ_CP050919.1\|WP_070446805.1\|803969_804581_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223999
NZ_CP050919.1\|WP_014562321.1\|810560_811607_+\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP050919.1\|WP_014562322.1\|811617_812205_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237631
NZ_CP050919.1\|WP_070446817.1\|797726_799019_+\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|176454
NZ_CP050919.1\|WP_014562320.1\|799469_800642_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341467
NZ_CP050919.1\|WP_003681896.1\|816351_816519_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234996
NZ_CP050919.1\|WP_048340322.1\|812241_814098_+\|molecular-chaperone-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP050919.1\|WP_054173466.1\|798999_799317_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050919.1\|WP_081540415.1\|808350_809229_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	9.00481e-62
NZ_CP050919.1\|WP_003685171.1\|803603_803957_-\|DUF1304-domain-containing-protein	gnl\|CDD\|377753	pfam06993, DUF1304, Protein of unknown function (DUF1304). This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.	5.69901e-24
NZ_CP050919.1\|WP_048340331.1\|806373_807774_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	4.32544e-158
NZ_CP050919.1\|WP_024271704.1\|802295_803258_+\|ketopantoate-reductase-family-protein	gnl\|CDD\|224805	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism].	3.76656e-60
NZ_CP050919.1\|WP_168183445.1\|816537_817104_+\|hypothetical-protein	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	2.60809e-69
NZ_CP050919.1\|WP_054173465.1\|808039_808327_+\|transposase	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.42003e-06
NZ_CP050919.1\|WP_048340330.1\|804755_806084_-\|D-serine-ammonia-lyase	gnl\|CDD\|235096	PRK02991, PRK02991, D-serine dehydratase; Provisional.	0
NZ_CP050919.1\|WP_023465770.1\|815775_816324_+\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|237288	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	9.09935e-68
NZ_CP050919.1\|WP_070446815.1\|796584_797571_+\|LacI-family-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.70504e-101
NZ_CP050919.1\|WP_003681899.1\|814209_815370_+\|molecular-chaperone-DnaJ	gnl\|CDD\|237653	PRK14276, PRK14276, chaperone protein DnaJ; Provisional.	0
NZ_CP050919.1\|WP_168183444.1\|794732_796427_-\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP050919.1\|WP_070446805.1\|803969_804581_-\|alpha/beta-hydrolase	gnl\|CDD\|223999	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only].	1.14524e-18
NZ_CP050919.1\|WP_014562321.1\|810560_811607_+\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	5.98231e-130
NZ_CP050919.1\|WP_014562322.1\|811617_812205_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237631	PRK14162, PRK14162, heat shock protein GrpE; Provisional.	4.79644e-53
NZ_CP050919.1\|WP_070446817.1\|797726_799019_+\|Y-family-DNA-polymerase	gnl\|CDD\|176454	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V. umuC subunit of Pol V. Pol V is a bacterial translesion synthesis (TLS) polymerase that consists of the heterotrimer of one umuC and two umuD subunits. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol V, RecA, single stranded DNA-binding protein, beta sliding clamp, and gamma clamp loading complex are responsible for inducing the SOS response in bacteria to repair UV-induced DNA damage.	1.44682e-103
NZ_CP050919.1\|WP_014562320.1\|799469_800642_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341467	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase. This family includes 1,3-propanediol (1,3-PD) dehydrogenase, a key enzyme in the microbial production of 1,3-PD that has been previously characterized as the product of dhaT gene in Klebsiella pneumoniae. 1,3-PD dehydrogenase is a member of the family III metal-dependent polyol dehydrogenases, which are shown to require a divalent metal ion for catalysis. However, some members of this family showed a dependence on Fe(2+) or Zn(2+) for activity.	0
NZ_CP050919.1\|WP_003681896.1\|816351_816519_+\|hypothetical-protein	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	2.02348e-15
NZ_CP050919.1\|WP_048340322.1\|812241_814098_+\|molecular-chaperone-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0

>NZ_CP050919.1|WP_048340331.1|806373_807774_-|amino-acid-permease
MKSKVVENQDGTMRALSNRHVQMIAIGGTIGTGLFLGSGSTISKTGPSIMLVYLTLALFFFFMMRAIGEMFYSDPSQHTFVSFISRYLGPTVGHFTGWTYWIGLVFVCMAELTATASYVQYWFPTIPSWLVELVFLAVLTSVNLIAARLFGEAEFWFAMIKIIAIIAMIVTGIFMMTSHSITPLGHASLSNIFHDYTLFPHGIFNFVSAFPMVFFAFQGIEFVSITIGEAKSPHAVIKKAVNETLLRILLFYIGALIVIMGIIPWTSLSANSSPFVQVFKLAGFPAAAATINFVVLTSAASALNSCIFSAGRHFYQLATEVPKSSWMNKTFAKISKNGVPAAAIILSAALVLITPLMSLTTAISSVFTIVTGVSSDMYIIVYTLTMIAHRKYRASSDFLPNGFVMPWYKVTSPLTIFFFGVIFVSLFFIPEDIIGAIGAIVWTLVFGSIEYFRQKKTASANIDQYK
>NZ_CP050919.1|WP_048340330.1|804755_806084_-|D-serine-ammonia-lyase
MTENIEQLPHKFPLLNNMRQYEAIDWINPEFGEKAEIPFTQAEVFDVAARFKRFAPYLATVFPETQKTNGQLISPLIKIDKMQSRLAGLNDAEIPGNVYLKADSMLPISGSIKSRGGIYEVLKFAEHVATTETNLTYSDDYAILATPEYHKLFADYGIMVGSTGNLGLSIGMAAASFGFKTTVHMSVDARQWKKDMLRANGVTVVEHNDSVSVAIAQGREEAAKDPHTYFIDDEGSKDLFLGYSAVGIEIQKQLADDGIFPDADHPVFVYLPAGVGGSPSGVSFGLQIMMPEGIYPVFAEPTHVPSVTMGMMTHLYDKIAVTDLGIDGKTLADGLAVPRSSKIAGRVMRTLLYGAHTFSDDDIYRYLAMLADTQGIYVEPSAAAGFTAIVPTVNEFKNKAALKNATHVVWATGGKLVPDDEMQKYYDKGRELLDEPQQILAR
>NZ_CP050919.1|WP_070446805.1|803969_804581_-|alpha/beta-hydrolase
MFHQQGYNVLLPDARAHGQSQGKYIGYGWPERYDVRKWSKKLIAHNGQDSQIVIFGVSMGGATTMMTSRIHLPRQVKAFVEDCGYDSLNAELNYEAGNLYNIPRVIRAPLIGSLSLINRVKNGFYTHEASSTALLARNHRPMLFIHGSKDTFVPTKMVYQNYAATKGPKKLWVVKGAKHAASYEKEPHEYPQHVARFLNQYVK
>NZ_CP050919.1|WP_003685171.1|803603_803957_-|DUF1304-domain-containing-protein
MLVIFVVMLVAIGHIGIMLIEMFASPEQQARAFDLPVEFTRQKEARISFANQGIYNGALGVMIIASYWLVRGVLLITVWQMLLVFIMVVALYGGFTATKKIWVIQLLPALIAFLLTL
>NZ_CP050919.1|WP_024271704.1|802295_803258_+|ketopantoate-reductase-family-protein
MTKYTVIGAGAMGLRYGVLIQERTGNPVDFIDTWEPSVNTIQEQKGTWVSRDHKDKHMVPINISFPEDYTGDPDVWIIFVKQMQLAEVLKRCAPLFKAHQYAFSAMNGMGHIDKISEYFPDDHIVGGTAMIATVLNGPGDVDFMGAPRTGVMHMCNKTEKTDAMTQQMFDDFKAAGLGPILTENFMGTLMSKVVFNAVVNTLCTMFEITMGQFIEYPGAKDMAEQLMNESFDACERAGIHLVETRQEEVESVDYVSRVANPYHYPSMYQDFSKGRNTEVDYINGYIAKIGREHDYICRTHEFLVHEVHMAEMMRKYKQAK
>NZ_CP050919.1|WP_014562320.1|799469_800642_+|iron-containing-alcohol-dehydrogenase
MNRQFDFLMPSVNFFGPGVIAKIGDRAKMLNMHKPLVVTQESLEKIENGPVVQTIESLKKAGVDYAIFTGVEPNPKIRNIKAGKKMYEEEKCDSIITVGGGSAHDCGKGIGIILTNGDDITKLAGIETLDNPLPPLMAVNTTAGTGSELTRHAVITNEEDHLKFVVVSWRNIPLVSFNDPMLMLGVPKSVTAATGCDAFVQAIEPYVSVDHNPITDSQCKEAIQLIQEALPEAVANGQNVEARTKMVEAEMLAGMAFNNANLGYVHAMAHQLGGQYDAPHGVCCALLLTTVEEYNLIACPDRFAELARIMGYDTTGLTTMQAAEKSIDGMREMCKAVGIPSSIKAIGAKPEDFSLMAENALKDGNAFSNPRKGTKQDIIDLYQKAYDGIY
>NZ_CP050919.1|WP_054173466.1|798999_799317_+|hypothetical-protein
MDKAWNKETESEKICERIKRCFTNRWRTRYWVSVVYCEPEHGYNLFLNIQPRNAYSRSIPIARLADCDYSELLDIITDVRQTYHFTLNYLNFPDDQVRKMRRNFR
>NZ_CP050919.1|WP_070446817.1|797726_799019_+|Y-family-DNA-polymerase
MDCSEEPRGNFLVIDNKSFYATVECTMRGLDPLTTPLVVMSEAENTNGGLVLASSPMAKKLYGISNVNRQRDLPHDNHLIVVPPRMNTYIEKNIEVNNIYREFVADGDLLPYSIDESILDITHSWKLFGDDPIAVVKKIQKTVHDRLKLVTTVGVGENPLQAKIALDVYAKHDPRFIGEITYDTVKKKIWSIPKITDAWGINERTAKRLAGLGIHSMAELAHANPFILKEKMGVIGAQLYASAWRIDRTDLAEEVLPKDKSLGNSQVLPHDYTRAEEIEVVIREIGSQVASRLRAHDKQAGGVYLSIGYSLSTPTEETGFAHSLKLSDSTVDSNLINGQLLYLFYTYWDGVSPVRRISVAATRLADRYGEQLDLFNPPKYDMVKLEDTVDAIRKRFGKTSIMRASSLEKGGTFIERSQLVGGHAGGQSLE
>NZ_CP050919.1|WP_070446815.1|796584_797571_+|LacI-family-transcriptional-regulator
MATIKDIARLAKVTPSTVSRVLNHSGGYSEKTRRRVEKIADELHYQKNEAAVNLVAQTSNLIGVIVTNATTSFAAPIIDSIEDWAYQNGGRILLAHCGLNDSERLKTCLNLMAGRKVNGIISVSVQFDENNLKLLDQLQLPLISLGVKVSNQPMISIDNLKAATTGTNYLISRGYQRIALIAVDTSDLQTGRTRCAGYQKAMESAGLTPSIIPGDYSFAAGKQAAELLLAKGELPEAIFAASDDAAAGVIYAAQEHGIKVPEQLAVLGFDNSSVASMIYPGITTIDQPFKQMGRLAIEHLTNQNVSSVELPYQIKERGSVAKYNSAQS
>NZ_CP050919.1|WP_168183444.1|794732_796427_-|alpha-glucosidase
MAYTPKWWWQNSVVYQVYPRSFQDSNHDGIGDLKGIISRLDYIKKLGADIIWLNPIYRSPNVDNGYDISDYRAIDPTFGSLTDFKELLTKAHELGLKIMMDLVVNHSSDENEWFKQSRQGKENPYRDYYIWRDPVDGHEPTNWGSYFSGSAWQYDETSGQYYLHLFAVKQPDLNWENEAVRHSVYDIMNWWADLGVDGFRMDVINLISKPAVYKDVPTAPGMQYGDVEPVVANGHRMHEFLQEMHQAVMAKHDLVTVGETPGATTDDAKKYANLEQTELNMVFEFEHVGLDDNDNPALVKWSDKKVSLPELRDNLVKWQTQLNGKAWNSLYWNNHDQPRVVSRFGNDDPKYRVVSAKMLATMLHCLQGTPYIYAGEELGMTNTTFNSLSDYRDLESINAYHQLVDEEHLVDGKTMSRYLAIHSRDNARTPMQWDDSKNAGFSDAEPWIAVNPNYSEINAKAALADPSSVFYHYQKLIQMRHDLPVMTEGKFALVNGNELDEQVFAYTRDDGETTLLVVANFTKETIKREYAAGQGKLLLSNYENVMGETLRPYQAKVYEFSSKR
>NZ_CP050919.1|WP_054173465.1|808039_808327_+|transposase
MTKHSYDKEFKEQAAQYYLGNKDHMTMNEISKNLGIGASTLHKWIKLFTETGEFGRGSGNFASDKDKEIARLKRQLRDAEGAIEVLKKSIGILSK
>NZ_CP050919.1|WP_081540415.1|808350_809229_+|IS3-family-transposase
MDVQHALESHPSINGMCDYVGISRSGYYQREKRHNHQSPRKLRKKFIQGEIKAIWLKSLCIYGAGKITQELRSKGYKIAERTVGKYMRELGIHAAYLTPWTTTTRNSKFDKQLINILDEQFNPLRPNAVWCIDTTYIPVHDGFVYLTSIMDLYSRRIIGWDLSETLEVSNVIPLIEKTKHSRHISKPLIMHSDRGSQFTSEAYNQVTANMTLSYSKKAYPWDNACIESFHALIKREWINRFKIHSYSEAKRLVFQYIETFYNTVRIHSHCGFKSPKQLEDEYQTQIQNLVVA
>NZ_CP050919.1|WP_003681906.1|810069_810435_-|hypothetical-protein
MPADHRYIQPQSAKEAMELIQKLFNSYRNAPLTSELLNYHNNLVARLNDDIMAAATTEGPKRVEQLTGMIELMQAWTRIRLSGRPFLGKMRHFKLEDGNQPKYKRRVHKINGTSNHRASRH
>NZ_CP050919.1|WP_014562321.1|810560_811607_+|heat-inducible-transcriptional-repressor-HrcA
MLTKRQEEVLQAIVRQYTTTGQPVGSKALVDHLAKKVSSATIRNEMAVLEHEGLATKEHSSSGRVPSKLGYRYYVDHLLDPLSVTENDLIVIQNSLGTEYQKIDEIVSHSADLLSNLTSYTAFTLKPEQKDARLSGFRLVPLGNKKVIAILVTDTGDVESQSFTLPRGIDTEAMEAVIRLINDQLTGLTLPEVVKRLVTDIPLQVTRYLHQPEGFLNIFDSVASRAAHERLFVGGRLNLLGFANQQNPAAVQDLYALLDHGNNLQAILDPDDEHDISVRIGNEIADNQVLDDYSLITAKYQVDQYGEGIIAVLGPTRMPYARTIGLVDSFRRELAKRLLDHYRRYYDS
>NZ_CP050919.1|WP_014562322.1|811617_812205_+|nucleotide-exchange-factor-GrpE
MAKDEEKNSQASAAPNEGEVKAKQEQTSAKEPAAKAGETEKVAALQKQVEELTKQLDDQKDQNLRAQAEMQNMTKRFKKEQAQLLKYDGQDLAKGILPVLDNLKRALEIEVEDENGQQLKKGIQMVHDHLEKALADHDIKEVEALNQPFDPTTQQAVQTVAASGDQKPDTVVQVLQAGYVLHDRVLRPAMVIVAQ
>NZ_CP050919.1|WP_048340322.1|812241_814098_+|molecular-chaperone-DnaK
MASNKIIGIDLGTTNSAVAVMEGNEPKIITNPEGGRTTPSVVSFKNGEVQVGEVAKRQAITNPNTVKSIKSHMGEAGYTVDIEGKKYTPQEISAMILQYIKKYAEDYIGDTVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTASSLAYGLDKKDRDEKILVYDLGGGTFDVSILELGDGVFQVLSTNGDTHLGGDDFDQKIMDWLIDGFKQENGIDLSQDKMALQRLKDAAEKAKKDVSGVQEAQISLPFITSGDNGPLHLEKTLTRAQFNQLTNDLVERTKQPVLNALKDAELSFSDIDEVILNGGSTRIPAVQEMVKSLTGKEPNHSINPDEAVALGAAIQGGVLTGDVKDVVLLDVTPLSLGIETMGGVFTKLIDRNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMAADNKTLGNFQLTDIPPAPRGVPQIKVTFDIDKNGIVNVSAEDQGTHKKQNITIKSNSGLTDEEIERMKKDAEANAEADKKKKEEADVRNETDQLLFQTDKTLEELKGKVSDDEIKKAQDAKDALQKAKDDNNLEDMKAKKDDLNKIVQDLTVKLYQQAQQENQANGGQPTGDQGDGKKDDDNTVDGDFEEVNPDDKK
>NZ_CP050919.1|WP_003681899.1|814209_815370_+|molecular-chaperone-DnaJ
MAEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQFGTTGSQAGGFGGQGGFGGFGQGGFSQGGFGDFSDIFGDIFGGGRARRDPSAPQQGRDLQYTMTLDFMDAVFGKETSIKYNRSAECHTCHGSGAKPGKSAHTCSTCHGQGYVLRQRQTMMGMMQSQEVCPTCGGKGQVIDPADQCDTCHGAGVTEERHELKVKVPQGIDDGQQMRLQGQGEAGKNGGPYGDLYIVFRVTPSRDFKRDGNTIYVDQDISISQATLGDHVQAKTVHGDVDLKIPAGTQSETKFRLRGKGVPRVNGNGNGDEYVTVHVKTPKTLNKRQREAMLAFAAASGEDVKGVKAGFFDKLKDAFEDNK
>NZ_CP050919.1|WP_023465770.1|815775_816324_+|imidazole-glycerol-phosphate-synthase-subunit-HisH
MGAKTVLTNDAKQVVSSDGIILTGIGTYQSGMTNFMQRHLIGPIRRAVEQGVPLLGIGLGMELLFDYSTEGGLIPGLGLIKGRVTEIPSTPQLPVPIVGWNMNRLENPVSRFNQIDEEYTYFVHSYYVQTAPQNIVATAEYGVVIPTIVHRGNVVGMQFQAEKSGPMGLNLLNDFLEGVVAR
>NZ_CP050919.1|WP_003681896.1|816351_816519_+|hypothetical-protein
MLTRRILPCLNVIDGRVKKRLLGSERLLDVGDPVELAFKYQENGTDGLVFITDPK
>NZ_CP050919.1|WP_168183445.1|816537_817104_+|hypothetical-protein
MLDMVEAISQQVFMPMTVVCNVRTVAEVRNLLLAGADKVGISTRSIMAPDFIPKVAQVFGNQSIVAMLDYHVDPRTNRKIVCTPGNTELDAYEWALRVVELGVGELLVNSMDRDGTENGFDTAFYRDLTTTLTIPVVASGGAGSTVDFEEVFVNSGVTGAMAASAFHLDQMTISEVKETLLEKGILVR

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Crispr_ID: NZ_CP050919_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050919_2

874466-874963

TypeII

Consensus_repeat	Method
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	CRT

7 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_CP050919_2

>merge|NZ_CP050919|2|874466-874963|PILER-CR,CRISPRCasFinder,CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTTAGGCCAATTGCGTGGACGGTATGCATCCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTGCCCCCAATCAATTCCATCTTCACCAGGTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGTTCGTTAAAAAGCTCATCAAACGCCGCTTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACAGTTTATAAGCTAGACCGATTAAGCCGGTCGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACTGACGGGTACACTATGCCGATCGTCTGCTAGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTACGAGCTGATGAGATGAGCGGTAAGAGATATTGTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCACTAAGACGGTGCAGATTAAGGACGAAATGTTGTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

>NZ_CP050919|2|1|874466-874894|PILER-CR
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTAGGCCAATTGCGTGGACGGTATGCATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGCCCCCAATCAATTCCATCTTCACCAGGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTCGTTAAAAAGCTCATCAAACGCCGCTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTTATAAGCTAGACCGATTAAGCCGGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGACGGGTACACTATGCCGATCGTCTGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GAGCTGATGAGATGAGCGGTAAGAGATATT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAG

>NZ_CP050919|2|2|874466-874963|CRISPRCasFinder
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTAGGCCAATTGCGTGGACGGTATGCATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGCCCCCAATCAATTCCATCTTCACCAGGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTCGTTAAAAAGCTCATCAAACGCCGCTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTTATAAGCTAGACCGATTAAGCCGGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGACGGGTACACTATGCCGATCGTCTGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GAGCTGATGAGATGAGCGGTAAGAGATATT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAAGACGGTGCAGATTAAGGACGAAATGTT
GTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

>NZ_CP050919|2|1|874466-874963|CRT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TTAGGCCAATTGCGTGGACGGTATGCATCC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGCCCCCAATCAATTCCATCTTCACCAGGT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GTTCGTTAAAAAGCTCATCAAACGCCGCTT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	AGTTTATAAGCTAGACCGATTAAGCCGGTC
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	TGACGGGTACACTATGCCGATCGTCTGCTA
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGTAC	GAGCTGATGAGATGAGCGGTAAGAGATATT
GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC	TAAGACGGTGCAGATTAAGGACGAAATGTT
GTCTTGGATGAGTGTCAGATCAGTAGTCTTAGAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050919.1\|WP_168183454.1\|868240_872386_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	mkCas0193_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|374653
NZ_CP050919.1\|WP_035430779.1\|877519_878473_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_CP050919.1\|WP_168183460.1\|881542_883777_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP050919.1\|WP_168183459.1\|880376_881126_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP050919.1\|WP_021816721.1\|873463_873769_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|226043
NZ_CP050919.1\|WP_070446998.1\|864786_865572_-\|hydroxyethylthiazole-kinase	unknown	unknown	gnl\|CDD\|236477
NZ_CP050919.1\|WP_168183452.1\|863181_863823_-\|thiamine-phosphate-synthase	unknown	unknown	gnl\|CDD\|234590
NZ_CP050919.1\|WP_168183457.1\|875231_875663_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP050919.1\|WP_168183455.1\|872580_873486_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP050919.1\|WP_021350382.1\|861849_862293_+\|phosphate-starvation-inducible-protein-PsiE	unknown	unknown	gnl\|CDD\|235075
NZ_CP050919.1\|WP_168183458.1\|875678_876155_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP050919.1\|WP_003681801.1\|876206_876437_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225215
NZ_CP050919.1\|WP_168183456.1\|873765_874437_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	cd12218_csn2_CAS-II-A	gnl\|CDD\|213411
NZ_CP050919.1\|WP_003681791.1\|879414_880377_+\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|234786
NZ_CP050919.1\|WP_003681822.1\|862307_863120_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|238574
NZ_CP050919.1\|WP_003681789.1\|881185_881527_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050919.1\|WP_070446996.1\|863987_864785_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	unknown	unknown	gnl\|CDD\|180561
NZ_CP050919.1\|WP_168183453.1\|866016_867984_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274774
NZ_CP050919.1\|WP_035430813.1\|876766_877333_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050919.1\|WP_003685054.1\|879032_879359_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP050919.1\|WP_168183454.1\|868240_872386_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|374653	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9. The REC lobe of Cas9 - the CRISPR-associated endonuclease Cas9 - includes the REC1 and REC2 domains. REC1 forms an elongated, alpha-helical structure consisting of 25 alpha helices and two beta-sheets, whereas REC2 inserted within REC1 adopts a six-helix bundle structure. The REC lobe and the NUC lobe of Cas9 fold to present a positively charged groove at their interface which accommodates the negatively charged sgRNA:target DNA heteroduplex. CRISPR (clustered regularly interspaced short palindromic repeat)-Cas system occurs naturally in bacteria as a defense against invasion by phages or other mobile genetic elements. Cas9 is targeted to specific genomic locations by sgRNAs or single guide RNAs, in order to complex with invading DNA in order to cleave it and render it inactive.	7.88134e-128
NZ_CP050919.1\|WP_035430779.1\|877519_878473_-\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_CP050919.1\|WP_168183460.1\|881542_883777_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP050919.1\|WP_168183459.1\|880376_881126_+\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.49337e-72
NZ_CP050919.1\|WP_021816721.1\|873463_873769_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	6.67688e-28
NZ_CP050919.1\|WP_070446998.1\|864786_865572_-\|hydroxyethylthiazole-kinase	gnl\|CDD\|236477	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated.	8.14566e-93
NZ_CP050919.1\|WP_168183452.1\|863181_863823_-\|thiamine-phosphate-synthase	gnl\|CDD\|234590	PRK00043, thiE, thiamine phosphate synthase.	4.81274e-72
NZ_CP050919.1\|WP_168183457.1\|875231_875663_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	6.34553e-30
NZ_CP050919.1\|WP_168183455.1\|872580_873486_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.99094e-83
NZ_CP050919.1\|WP_021350382.1\|861849_862293_+\|phosphate-starvation-inducible-protein-PsiE	gnl\|CDD\|235075	PRK02833, PRK02833, phosphate-starvation-inducible protein PsiE; Provisional.	2.44954e-37
NZ_CP050919.1\|WP_168183458.1\|875678_876155_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.48402e-17
NZ_CP050919.1\|WP_003681801.1\|876206_876437_-\|hypothetical-protein	gnl\|CDD\|225215	COG2336, MazE, Growth regulator [Signal transduction mechanisms].	0.00418451
NZ_CP050919.1\|WP_168183456.1\|873765_874437_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213411	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	4.82288e-87
NZ_CP050919.1\|WP_003681791.1\|879414_880377_+\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|234786	PRK00517, prmA, 50S ribosomal protein L11 methyltransferase.	1.38905e-101
NZ_CP050919.1\|WP_003681822.1\|862307_863120_+\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	1.30179e-90
NZ_CP050919.1\|WP_070446996.1\|863987_864785_-\|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase	gnl\|CDD\|180561	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed.	1.44036e-121
NZ_CP050919.1\|WP_168183453.1\|866016_867984_+\|hypothetical-protein	gnl\|CDD\|274774	TIGR03766, hypothetical_protein_lp_2141, conserved hypothetical integral membrane protein. Models TIGR03110, TIGR03111, and TIGR03112 describe a three-gene system found in several Gram-positive bacteria, where TIGR03110 (XrtG) is distantly related to a putative transpeptidase, exosortase (TIGR02602). This model describes a small clade that correlates by both gene clustering and phyletic pattern, although imperfectly, to the three gene system. Both this narrow clade, and the larger set of full-length homologous integral membrane proteins, have an especially well-conserved region near the C-terminus with an invariant tyrosine. The function is unknown.	6.43746e-19

>NZ_CP050919.1|WP_168183456.1|873765_874437_+|type-II-A-CRISPR-associated-protein-Csn2
MKLQYHGHQPVELMPGKVVILQIENPSVNTELIQGLQGYNDCLRMIDDEYQELNLSKVMKWEGDLVLNPTKLDSYQTSLDKMIVKNLSIEKRDRMNDLAREIYSEMQDSLFEFDLSLEVRYDESLLRLYKYAKIKYLTQVIRQPYGIIETDLKLHLELKDCQVLGYCNVANYLLPEQIQEFATLVEKTELAVLLVEFSEKRETLQQLKQDIYRIDRDFVDWHE
>NZ_CP050919.1|WP_021816721.1|873463_873769_+|CRISPR-associated-endonuclease-Cas2
MRLMVMFDLPTDTSQQRKQYRQFRKKLLNEGFIMIQYSVYVRVCTTRSAAEFLERRLKDYLPDQGVIQSLMLTEKQYSDMHFLLGDEVKEVRNSSKRTIVL
>NZ_CP050919.1|WP_168183455.1|872580_873486_+|type-II-CRISPR-associated-endonuclease-Cas1
MGWRSIIIGQHAKITHSAHMMVVQTKDGINEIPMDDIAKVLVETTQAMISSDFMSACLQRNIKVIFVDRKYQPIGETVGYQPVARDYELLERQFLWPLERREQLWTRIAHAKIESQIKVARLNGCPVQELESELEAIEVNDVSNREAVVARKYFPLLFGKDFSRRQENQYNAALDYGYAVLLAETNQSITENGYLVELGIHHQNRANRFNLGSDLMEPFRPVIDYWVTGQKFTEFNRQVRVGLVDALHMVIKYNGTEMLTQNAVRQYVRECLDYLSGERDEIEVKVEFKDEVPNHALDGHV
>NZ_CP050919.1|WP_168183454.1|868240_872386_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MDYVKEYHIGLDIGTSSIGWAVTDSQFKLMRIKGKTAIGVRLFEEGKTAAERRTFRTTRRRLKRRKWRLHYLDKIFAPHLQEVDENFLRRLKQSNIHPEDPAKNQAFIGKLLFPDLLKKNERGYPTLIKMRDELPVEQRAHYPVTNIYKLREAMINEDRQFDLREVYLAVHHIVKYRGHFLNNASVDKFKVGRIDFDKSFNVLNEAYEELQNGEGSFTIEPSKVEKIGQLLLDTKMRKLDRQKAVAKLLEVKVADKEETKRNKQIATAMSKLVLGYKADFATVAMANGNEWKIDLSSETSEDEIEKFREELSDAQNDILTEITSLFSQIMLNEIVPNGMSISESMMDRYWMHERQLAEVKEYLATQPASARKEFDQVYNKYIGQAPKEKGFDLEKGLKKILSKKENWKEIDELLKAGDFLPKQRTSANGVIPHQMHQQELDRIIEKQAKYYPWLATENPATGERDRHQAKYELDQLVSFRIPYYVGPLVTPEVQKATSGAKFAWAKRKEDGEITPWNLWDKIDRAESAEAFIKRMTVKDTYLLNEDVLPANSLLYQKYNVLNELNNVRVNGRRLSVGIKQDIYTELFKKKKTVKAGDVASLVMVKTRGVNKPSVEGLSDPKKFNSNLATYLDLKSIVGDKVDDNRYQMDLENIIEWRSVFEDGEIFADKLTEVEWLTDEQRSALVKKRYKGWGRLSKKLLTGIVDENGRRIIDLMWNTDQNFMQIVNQPVFKEQIDQLNQKAITNDGMTLRERVESVLDDAYTSPQNKKAIWQVVRVVEDIVKAVGNAPKSISIEFARNEGNKGEITRSRRTQLQKLFEDQAHELVKDTSLTEELEKAPDLSDRYYFYFTQGGKDMYTGDPINFDEISTKYDIDHILPQSFVKDNSLDNRVLTSRKENNKKSDQVPAKLYAAKMKPYWNQLLKQGLITQRKFENLTMDVDQNIKYRSLGFVKRQLVETRQVIKLTANILGSMYQEAGTDIIETRAGLTKQLREEFDLPKVREVNDYHHAVDAYLTTFAGQYLNRRYPKLRSFFVYGEYMKFKHGSDLKLRNFNFFHELMEGDKSQGKVVDQQTGELITTRDEVADYFDWVINLKVMLISNETYEETGKYFDASHESSSLYLKNQKKKSKLVVPLKNKLQPEYYGAYTGITQGYMVILKLLDKKGGFGVYRIPRYAADILNKCHDEVAYRNKIAEIISSDPRAPKSFEVVVPRVLKGTFLVDGEEKFILSSYRYKVNATQLILPVSDIKLIQDNFKALKKLNVEMQTKKLIEIYDNILRQVDKYFKLYDINKFRAKLHDGRSKFVELDDFGQDASKEKVIIKILRGLHFGSDLQNLKEIGFGTTPLGQFQVSEAGIRLSNTAFIIFKSPTGLFNRKLYLKNL
>NZ_CP050919.1|WP_168183453.1|866016_867984_+|hypothetical-protein
MGTVTGARRVSRGLAWILVACLVGGLVSNFTFSQNWVTSLILVPLTLLGWWGLPKLAPVIDRLTNRQVTLLVGGGMTVMVLLQMAVLKWLPVTVYHDPLRVLDQATRMAVGHTSWKITYFWRYPQNVPIAYLLSRWLKLTMEMGMGVNRGVHLLSMLMLDGMVLLGIDTAWRVSKKKHLVLGILAFGVLTPFAYTYYLQVFYTDLPVMFVLLYLLRTLVLWRRRNWWQKSLSGALLVLLAMLGQLTKANMIVIIPAMLLTALILWGRHRFKQSQLLVPMLLITLGVALSFPLSSTLDKAAHFTRQTDYEFPLTQWVAMGLNEKSNGVYNTKDAVANVKLKTKAARNAHNLQVIKQRLAKQNVGLIKLWLAKLMVLTNAGNIFHWYNGGMQEAPRSYLKAAPVFTGLVAISYQLATCLLFGFVIKRLLATKMTLASANEQVALLVILTALGYLAFHVLLWEVEERYGEVLVPLSWLLVTLLPAADDQPITPKQVGSVFALGTVAVLVGAMTNLGVNSSGQTVTVAAQRSQLSTQYGAKPVDLAPGKQISQVVKINGAASDVSVQIHAKSHVTVTLVELKTGDEYVFKRHADEYDYQGNVLAGTYQFVIKNQTAVDQDVDIVHVPHYRMAPYPMDDQGTVHWDTSLIYWFRDVRSAN
>NZ_CP050919.1|WP_070446998.1|864786_865572_-|hydroxyethylthiazole-kinase
MQNAIATIKGTNPIVLTVANNVTPADVANGLNALGASPMMSQTPEEADDMVNIAQAAAINLGTLNPHQRGEMEAVMEAAKKYHKPTVLDPVACGATMYRLRVVTELLHQYHFTVIRGNAGEIATLAGVEWQSHGIDAGEGNADLEKVARLAAKKLGSVIVLSGEVDIVTDGTRLARLPYGSPAFKTHVGTGDILSSLIGAFLATNDDAFDAAVDAVTTFTLCGQAVEDQRPGNWYPGLLNNLDAVTDQQLAAWQEAFGKEA
>NZ_CP050919.1|WP_070446996.1|863987_864785_-|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTNEFPQALTIAGSDSGGGAGMQADLKTIQMRHVFATTVVVAVTAQNTLGVQDALALPTEMIDAQFASLADDFKIWAAKTGMLADVPTVQAVVRNLKQYDFGPLTVDPVMIAKGGAKLLADEAITTVKEELLPLATLVTPNLPEAEALTGLKAERPADMVKIGQALQKLGPKNVLVKGGHLGGDQAASDFVLMEDGTSFWMTSPRIDTVRTHGTGDTISACITAELAKGVGLEQAIRTAKGYVEATIRDTIQVGHGHGPLNHWAL
>NZ_CP050919.1|WP_168183452.1|863181_863823_-|thiamine-phosphate-synthase
MLFKNEMLRCYLIGGSQDTHHDPDEFLTKVEAAMQAGITAFQYREKGTSTLSKAEILALGQQVRELATKYGVPLFVDDDLELAAAIKADGIHVGQKDQRIEEVLAAVGDQLMVGYSCNTAAQVAHANQLNVDYIGTGPVFPTISKDDAGSALGVDGLADFVEQSTHPVVAIGGISLDNAGATLTSGCAGLSMISMVLGADDVAGTVKKILELY
>NZ_CP050919.1|WP_003681822.1|862307_863120_+|bifunctional-hydroxymethylpyrimidine-kinase/phosphomethylpyrimidine-kinase
MTQYVQALTIAGHDSDGSAGMPADLHAFFIDGVYGQGLLTAAVSGNSYGITQQQIMPTSFIKEQFKVLADDFAIKAAKTGMLANDDVINAVADSYDEAKFGPLVVDPVIITKHGVMLLEQSAYELFRERIIPLATVITPNFYEAQKLTELELKDDDQVQEAAAKLHALGAKNVVIKGQHIEGQTTPVRDFVSLADGKTFWLEEEYVPTDRVNGTGDTFSAIIAAELAKGHSVEAGVRLAKKVVHEAIANEIEVGHQFGPINHWAGQEAAN
>NZ_CP050919.1|WP_021350382.1|861849_862293_+|phosphate-starvation-inducible-protein-PsiE
MVIEVSSQEWFQKIAHLLELVALVAVGLLGLALIVQLGMELLAVIKLALAPVSNPGFYDFLNEVTSFFIIFEFIVMVIEALRNHGHISITMLMGLGLTALLRHLLAASNSNGIETMVEVGAIVLLTVGLAIYRRFVHDPNESFEKRI
>NZ_CP050919.1|WP_168183457.1|875231_875663_+|alpha/beta-hydrolase
MPIHSRRVIKQDVWIERPDHSKLRLAIFRAKQVATKRPATGILWLHGGGYALETAEEALVYAEQLVADGRSVMVAPDYTTSALAPYPAALDDCYLALTWLRDNATRFGVNPNQLVVGGDSAGGGLTAAVCLRARDQGDVKIDW
>NZ_CP050919.1|WP_168183458.1|875678_876155_+|alpha/beta-hydrolase
MLDDRLVLASAKNNNAPVWNSRVNQAAWDLYLGDLLLDKIPIYAAPGRATDLVGLPPAITYVGDLDPFLDETCLYAKRLERAGIPVACKVFDGCYHVATMALTKWPRTPTLRKWPTTFYAPNSSRPRPSTGRKTRKRKPSVCKHQAPRLHYVIWALSS
>NZ_CP050919.1|WP_003681801.1|876206_876437_-|hypothetical-protein
MKLKVQQVGDSLAFVIPKEFGIPDGQCYTVEQTADGTIIFRPIPPSLFKENGFQGNELRQKDVSLEDGVLDSEWSD
>NZ_CP050919.1|WP_035430813.1|876766_877333_+|hypothetical-protein
MTVYAMNLPGFLAGRSLLTPLTIYAGQTSDYKELALNIANFPKFLQLAFPTAVLDHYELLKRGLMVLTCLILLAGFWYLRRLDLTPQRFLVVATWSFWTRTMFLPSMHDRYSYFVMVMLALVALLDRRMIGVALVSIGISTVLYLRYLLNADTAIDLWPLAIIQIINYCGFTAGTFLHPQPEYLHSFR
>NZ_CP050919.1|WP_035430779.1|877519_878473_-|L-lactate-dehydrogenase
MSKTHQKVVLIGDGAVGSSYAFAMVQQGLAQEFAIIDLNKKRTEGDALDLEDATPFTAPKLVYGADYDTCKDADLVVITAGAPQKPGETRLDLVDKNLKIIKSVVEPVVKSGFQGIFLVAANPVDILTYAVQKFSGFPRNKVVGSGTSLDSARLRVGLSKLFNVSPVDVNANMMAEHGDTEFAAFSSATIGGLPLYDLAEAKGISKDDLYKLEDDVRNKAYAIINSKGATFYGVATALMRISRAILRDENAVLPVGAPMSGEYGLKDIYIGTPAVINANGIAEVLEVPLDEREAKAMADSAKTLKEIAKNGMAKIQG
>NZ_CP050919.1|WP_003685054.1|879032_879359_+|hypothetical-protein
MITMLNRTKQFMREHDLTYKKEYIRPMMSPEHVYVFRFGKHRLNNRVIIRYSHTWTGRVKINEIDVRMHHQHHPRIFKTEDDMLAYLAHHLEKREAKEATRVHTGEEE
>NZ_CP050919.1|WP_003681791.1|879414_880377_+|50S-ribosomal-protein-L11-methyltransferase
MNWTAIVVETSTEAVDAVSYILTDTGATGVKIDDAADYQKLKPGKYGPYGEIVDPSTLPHREEGAAVTGYYPPTTFVPEKIADIRQRVAKLADFGLNPAPARVAAEEIDNQDWATAWQKYYHPVRVTRELTIVPQWEEYTPATADEKLLVLDPGMAFGTGTHPTTQLMLQALTIALRGGESMIDVGTGSGVLSIAAKQLGAGEVWAYDIDDVAVKSAKKNLALNPIAKDVHTGVNSLLDGIHTQVDLVVANILAEIILPLVPQAFENLKPGGKFLTSGIINTKFETVKKAIEAQGFVVDETMRIKDWYGIIAHKPAPEEA
>NZ_CP050919.1|WP_168183459.1|880376_881126_+|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVDQALPAHRRLNLPDDVSHHLITVMRAAAGTQVELVLADHHAYLATLLDPATAEVKVEQDLGGDSELPIEVTLACGLPKTKEKPELIVQKATELGAKRIIFFESARSVSHWNDQRQGKKVERLQKIANAAAEQSHRNQIPEVSYVKDLKSLLTIFSFDHRVVAWEESAKQGERAALATVFDQVTPGQSLLAIFGPEGGLTETEVETMMAAGVVACGLGPRILRTETAPLYLMAAVSYHFELAEH
>NZ_CP050919.1|WP_003681789.1|881185_881527_+|hypothetical-protein
MKSLKSLWQRADRRLWVLSILIGFVVTWLVNIVPFINKVERFAVFYLLLYGAFAIWTGFTLQNRRRCWQAFVFPVSFLLAAHLFGPKYSLYFAPAYLAVAYLAWSMVRANRNK
>NZ_CP050919.1|WP_168183460.1|881542_883777_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MSQTKELTHEDVKNMVAKYMNEEHVALVERAYHFAAVAHQGQVRKSGEPYIIHPIQVAGILAELKMDPETVCAGYMHDLVEDTGATLDDIKELFGPTIAMIVDGDTKISKIHYKSNKEQMAETHRKLLLAMSKDIRVMIVKLADRLHNMRTLKHLRPDKQRRISNETLEIYAPIADRLGISTIKWELEDLSLRYLNPQQYYRIVHLMNSRRDQRIDYISAAIKVVKTAIADLDLGPNVEIYGRPKHIYSVYRKMVTQHKQFSQIYDLLAIRVVVDSIKDCYAVLGAIHTSWTPMPGRFKDYIAMPKANGYQSLHTTVIGPEGRPLEIQIRTHQMHEVAEYGVAAHWAYKEGKTNGVDQASQDSKKLNVVKEILELRSESNGTDEFMQGIQSDVFADKVYAFTPKGDAIEMPKGAGPLDMAYQIHTEVGNHTTGAKVNGRIIPLNYEIKNGDIVDILTSSSSAGPSRDWMDLVSTRRARNKIRQFFRTHDREENVIEGRRIMEQQLRDAGYEPAELMVSDKEEEIAGRLHYKTADDMYAALGFGDIAPIGLRNRFTEDIRKHKEEEKQNAAQKAILEGHKTLEQEPPTRQKVAKSSEGVVVEGVDNLLTRLSHCCSPVPGDAIVGYITKGRGVSVHRADCPNIKAAEKSGQRVVSVYWANPAGDKTNYNADIEVEGYNRNGLLNDIIRAINNNTRYLTSINGRIDHNKMATISATVGVRNFQHLQLIMDSLKNLPDVYVVKRVIH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP050919.1	1060446-1060476	0	1.0

1. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to position: 1060446-1060476, mismatch: 0, identity: 1.0

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaat	Protospacer
*******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP015861	Lactobacillus plantarum strain LZ227 plasmid LZ227p3, complete sequence	27431-27461	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP035135	Lactobacillus plantarum strain SRCM103311 plasmid unnamed4	44248-44278	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP019032	Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence	23674-23704	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	55094-55124	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	1337-1367	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	35705-35735	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP029548	Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence	52649-52679	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP032360	Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence	27808-27838	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP018212	Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence	32959-32989	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP043940	Lactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence	23283-23313	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP032643	Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence	44328-44358	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP018177	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence	43117-43147	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP018179	Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence	31547-31577	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP018182	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence	30401-30431	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP028244	Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence	30463-30493	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP054261	Lactobacillus plantarum strain TCI507 plasmid unnamed2	15620-15650	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	MN830253	Lactobacillus phage JNU_P5, complete genome	32972-33002	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP032753	Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence	20436-20466	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP011405	Lactobacillus salivarius str. Ren plasmid pR2, complete sequence	33388-33418	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	CP033373	Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence	237163-237193	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	CP033373	Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence	249367-249397	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP032745	Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence	33308-33338	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP012651	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK03, complete sequence	21474-21504	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_LN898145	Lactobacillus oligofermentans DSM 15707 = LMG 22743 isolate LACOL plasmid II, complete sequence	42909-42939	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP045037	Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence	11362-11392	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP018181	Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence	31820-31850	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP013152	Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence	35887-35917	1	0.968
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP054658	Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence	20865-20895	2	0.935
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NC_021503	Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence	21758-21788	2	0.935
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP040502	Lactobacillus paragasseri JV-V03 plasmid unnamed2, complete sequence	17007-17037	3	0.903
NZ_CP050919_2	2.4\|874700\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874700-874729	30	GU323708	Lactobacillus phage phiPYB5, complete genome	24394-24423	3	0.9
NZ_CP050919_1	1.1\|807959\|31\|NZ_CP050919\|CRISPRCasFinder	807959-807989	31	NZ_CP045730	Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence	25375-25405	4	0.871
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	MN703407	Microbacterium phage Leaf, complete genome	276-305	6	0.8
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	MN703414	Microbacterium phage Dewdrop, complete genome	276-305	6	0.8
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	MT639646	Microbacterium phage Rasputia, complete genome	276-305	6	0.8
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	NC_047977	Microbacterium phage Hendrix, complete genome	327-356	6	0.8
NZ_CP050919_2	2.2\|874568\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874568-874597	30	KU886222	Erwinia phage vB_EamM_Special G, complete genome	197764-197793	7	0.767
NZ_CP050919_2	2.2\|874568\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874568-874597	30	MK514281	Erwinia phage Rebecca, complete genome	197310-197339	7	0.767
NZ_CP050919_2	2.2\|874568\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874568-874597	30	KU886223	Erwinia phage vB_EamM_Simmy50, complete genome	195540-195569	7	0.767
NZ_CP050919_2	2.3\|874634\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874634-874663	30	KP735928	Staphylococcus phage IME-SA4, complete genome	39306-39335	8	0.733
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	NZ_CP052134	Burkholderia glumae strain HN plasmid pbghn2, complete sequence	190957-190986	8	0.733
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	NZ_CP045089	Burkholderia glumae strain GX plasmid pWSGX1, complete sequence	151877-151906	8	0.733
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	NZ_CP009433	Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence	86183-86212	8	0.733
NZ_CP050919_2	2.5\|874766\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874766-874795	30	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	61494-61523	8	0.733
NZ_CP050919_2	2.3\|874634\|30\|NZ_CP050919\|PILER-CR,CRISPRCasFinder,CRT	874634-874663	30	KU598975	Staphylococcus phage CNPx, complete genome	40504-40533	9	0.7

1. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP015861 (Lactobacillus plantarum strain LZ227 plasmid LZ227p3, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

2. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP035135 (Lactobacillus plantarum strain SRCM103311 plasmid unnamed4) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

3. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP019032 (Lactobacillus fermentum strain SNUV175 plasmid pSNU175-3, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

4. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

5. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

6. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

7. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP029548 (Lactobacillus paracasei strain EG9 plasmid pEG9B, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

8. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP032360 (Lactobacillus plantarum strain ZFM55 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

9. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP018212 (Lactobacillus plantarum strain BLS41 plasmid pLPBLS41_3, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

10. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP043940 (Lactobacillus nenjiangensis strain SH-Y15 plasmid pHY011, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

11. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP032643 (Lactobacillus plantarum strain ZFM9 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

12. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP018177 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-1, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

13. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP018179 (Lactobacillus hordei strain TMW 1.1822 plasmid pL11822-3, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

14. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP018182 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

15. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP028244 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

16. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP054261 (Lactobacillus plantarum strain TCI507 plasmid unnamed2) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

17. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to MN830253 (Lactobacillus phage JNU_P5, complete genome) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

18. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP032753 (Lactobacillus plantarum subsp. argentoratensis strain DSM 16365 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

19. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP011405 (Lactobacillus salivarius str. Ren plasmid pR2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

20. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

21. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to CP033373 (Lactobacillus fermentum strain DR9 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

22. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP032745 (Lactobacillus paraplantarum strain DSM 10667 plasmid unnamed1, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

23. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP012651 (Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK03, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

24. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_LN898145 (Lactobacillus oligofermentans DSM 15707 = LMG 22743 isolate LACOL plasmid II, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

25. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP045037 (Lactobacillus mali strain LM596 plasmid unnamed2, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

26. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP018181 (Lactobacillus nagelii strain TMW 1.1827 plasmid pL11827-1, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

27. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP013152 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-4, complete sequence) position: , mismatch: 1, identity: 0.968

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagttaaa	Protospacer
******************************

28. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP054658 (Lactobacillus reuteri strain AN417 plasmid pAN417A, complete sequence) position: , mismatch: 2, identity: 0.935

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtatacaagttaaa	Protospacer
*******************.**********

29. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NC_021503 (Lactobacillus reuteri I5007 plasmid pLRI01, complete sequence) position: , mismatch: 2, identity: 0.935

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtatacaagttaaa	Protospacer
*******************.**********

30. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP040502 (Lactobacillus paragasseri JV-V03 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.903

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
taggtctagaataaaaagtgtacaagttaaa	Protospacer
*.**.*************************

31. spacer 2.4|874700|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to GU323708 (Lactobacillus phage phiPYB5, complete genome) position: , mismatch: 3, identity: 0.9

agtttataagctagaccgattaagccggtc	CRISPR spacer
ggtttataagctagaccgattaagtaggtc	Protospacer
.***********************. ****

32. spacer 1.1|807959|31|NZ_CP050919|CRISPRCasFinder matches to NZ_CP045730 (Lactobacillus gastricus strain LG045 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.871

tgggcctagaataaaaagtgtacaagttaat	CRISPR spacer
tgggcctagaataaaaagtgtacaagtctta	Protospacer
***************************.

33. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to MN703407 (Microbacterium phage Leaf, complete genome) position: , mismatch: 6, identity: 0.8

tgacgggtacactatgccgatcgtctgcta-	CRISPR spacer
ggacggctacacgatgccgatcgt-ggccat	Protospacer
 ***** ***** ***********  **.*

34. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to MN703414 (Microbacterium phage Dewdrop, complete genome) position: , mismatch: 6, identity: 0.8

tgacgggtacactatgccgatcgtctgcta-	CRISPR spacer
ggacggctacacgatgccgatcgt-ggccat	Protospacer
 ***** ***** ***********  **.*

35. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to MT639646 (Microbacterium phage Rasputia, complete genome) position: , mismatch: 6, identity: 0.8

tgacgggtacactatgccgatcgtctgcta-	CRISPR spacer
ggacggctacacgatgccgatcgt-ggcgat	Protospacer
 ***** ***** ***********  ** *

36. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to NC_047977 (Microbacterium phage Hendrix, complete genome) position: , mismatch: 6, identity: 0.8

tgacgggtacactatgccgatcgtctgcta-	CRISPR spacer
ggacggctacacgatgccgatcgt-ggcgat	Protospacer
 ***** ***** ***********  ** *

37. spacer 2.2|874568|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to KU886222 (Erwinia phage vB_EamM_Special G, complete genome) position: , mismatch: 7, identity: 0.767

tgcccccaatcaattccatcttcaccaggt	CRISPR spacer
tcaccccaatcaaattcatcttcaccctgc	Protospacer
*  ********** *.**********  *.

38. spacer 2.2|874568|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to MK514281 (Erwinia phage Rebecca, complete genome) position: , mismatch: 7, identity: 0.767

tgcccccaatcaattccatcttcaccaggt	CRISPR spacer
tcaccccaatcaaattcatcttcaccctgc	Protospacer
*  ********** *.**********  *.

39. spacer 2.2|874568|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to KU886223 (Erwinia phage vB_EamM_Simmy50, complete genome) position: , mismatch: 7, identity: 0.767

tgcccccaatcaattccatcttcaccaggt	CRISPR spacer
tcaccccaatcaaattcatcttcaccctgc	Protospacer
*  ********** *.**********  *.

40. spacer 2.3|874634|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to KP735928 (Staphylococcus phage IME-SA4, complete genome) position: , mismatch: 8, identity: 0.733

gttcgttaaaaagctcatcaaacgccgctt	CRISPR spacer
caacgtttaaaatctcatcaaacgcctccg	Protospacer
   **** **** ************* *.

41. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP052134 (Burkholderia glumae strain HN plasmid pbghn2, complete sequence) position: , mismatch: 8, identity: 0.733

tgacgggtacactatgccgatcgtctgcta	CRISPR spacer
gcgcgggtacaccacgccgatcgtctggcc	Protospacer
  .*********.*.************ .

42. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045089 (Burkholderia glumae strain GX plasmid pWSGX1, complete sequence) position: , mismatch: 8, identity: 0.733

tgacgggtacactatgccgatcgtctgcta	CRISPR spacer
gcgcgggtacaccacgccgatcgtctggcc	Protospacer
  .*********.*.************ .

43. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009433 (Burkholderia glumae LMG 2196 = ATCC 33617 plasmid pBIN_1, complete sequence) position: , mismatch: 8, identity: 0.733

tgacgggtacactatgccgatcgtctgcta	CRISPR spacer
gcgcgggtacaccacgccgatcgtctggcc	Protospacer
  .*********.*.************ .

44. spacer 2.5|874766|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.733

tgacgggtacactatgccgatcgtctgcta	CRISPR spacer
gcgcgggtacaccacgccgatcgtctggcc	Protospacer
  .*********.*.************ .

45. spacer 2.3|874634|30|NZ_CP050919|PILER-CR,CRISPRCasFinder,CRT matches to KU598975 (Staphylococcus phage CNPx, complete genome) position: , mismatch: 9, identity: 0.7

gttcgttaaaaagctcatcaaacgccgctt	CRISPR spacer
caacgtttaaaatctcatcaaacgccttcg	Protospacer
   **** **** ************* ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

38882 : 154021

Lactobacillus_phage(15.0%)

protease,transposase,tRNA,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035430860.1\|38882_40976_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	1.5e-120	40.3
WP_160229816.1\|41276_42737_+	cardiolipin synthase	NA	NA	NA	NA
WP_168183352.1\|43219_46957_+	ATP-dependent helicase	NA	NA	NA	NA
WP_168183353.1\|46963_50977_+	helicase-exonuclease AddAB subunit AddA	S5MMD7	Bacillus_phage	3.3e-12	22.4
WP_012390675.1\|50976_51840_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.3e-58	46.4
WP_168183354.1\|52078_53704_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_003682345.1\|53997_54354_-	arsenate reductase family protein	NA	NA	NA	NA
WP_168183355.1\|54392_55508_-	ABC transporter permease	NA	NA	NA	NA
WP_168183356.1\|55500_56211_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.7e-26	33.0
WP_003682354.1\|56566_57541_-	GMP reductase	Q4ZCY7	Staphylococcus_virus	4.9e-135	69.0
WP_003685683.1\|57737_59027_+	adenylosuccinate synthase	A0A285PX35	Cedratvirus	3.9e-71	36.2
WP_003685685.1\|59353_60736_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003685686.1\|61019_61559_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_003682363.1\|61677_62409_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_168183357.1\|62408_63035_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	4.8e-35	38.1
WP_114698759.1\|63302_63701_+\|transposase	IS200/IS605 family transposase	A0A286QN76	Streptococcus_phage	1.2e-44	62.1
WP_168183358.1\|63700_64876_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0P0ICY9	Lactobacillus_phage	2.4e-112	54.4
WP_021350374.1\|65213_65606_-	hypothetical protein	NA	NA	NA	NA
WP_015638436.1\|65748_67287_+	glycosyltransferase	NA	NA	NA	NA
WP_024500604.1\|67286_68783_+	accessory Sec system glycosyltransferase Asp1	NA	NA	NA	NA
WP_114684122.1\|69192_70035_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015638439.1\|70060_71125_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-28	35.8
WP_003682378.1\|71117_71819_+	ABC transporter permease	NA	NA	NA	NA
WP_168183664.1\|71944_73093_+	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_114684120.1\|73392_74817_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	7.3e-71	33.9
WP_070447109.1\|76233_77178_+	aldo/keto reductase	NA	NA	NA	NA
WP_168183359.1\|77295_78588_-	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_168183360.1\|78600_78837_-	D-alanine--poly(phosphoribitol) ligase subunit DltC	NA	NA	NA	NA
WP_012390693.1\|78866_80093_-	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	2.6e-24	31.2
WP_003682392.1\|80092_81622_-	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	5.3e-35	25.8
WP_003682395.1\|81636_81768_-	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_100352082.1\|81993_83127_+	exonuclease SbcCD subunit D	NA	NA	NA	NA
WP_168183361.1\|83123_86228_+	SMC family ATPase	NA	NA	NA	NA
WP_003682400.1\|86515_87814_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	6.2e-93	48.8
WP_168183362.1\|87955_88411_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	3.6e-32	50.0
WP_054173696.1\|88484_89735_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_168183363.1\|90072_90999_+\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_086031824.1\|92291_93578_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_048340426.1\|93819_94833_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_015638452.1\|95090_96344_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	7.8e-85	42.2
WP_070446833.1\|96811_98266_+	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_070446831.1\|98269_99013_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.0e-32	41.9
WP_168183364.1\|99333_100707_+	amino acid permease	NA	NA	NA	NA
WP_160229828.1\|101292_102216_+\|transposase	IS30 family transposase	H7BVY4	unidentified_phage	3.9e-33	32.2
WP_107504371.1\|102523_102613_-\|holin	putative holin-like toxin	NA	NA	NA	NA
WP_070446795.1\|103079_104459_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	3.9e-122	49.9
WP_114684423.1\|104470_104665_+\|transposase	transposase	NA	NA	NA	NA
WP_151378529.1\|106498_106915_+\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.8e-46	71.8
WP_003684331.1\|106911_108075_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
WP_070446803.1\|108611_109811_+	nucleoside permease	NA	NA	NA	NA
WP_003685735.1\|110045_110966_+	ribonucleoside hydrolase RihC	NA	NA	NA	NA
WP_168183665.1\|111154_111892_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_003682414.1\|111910_112846_+	nucleoid occlusion protein	I3NLC2	Bifidobacterium_phage	6.2e-10	33.6
WP_168183365.1\|112859_113693_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	1.8e-16	33.5
WP_168183366.1\|113705_113906_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_003682418.1\|113921_115019_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_168183367.1\|115052_115826_+	DUF1129 domain-containing protein	NA	NA	NA	NA
WP_003685751.1\|116180_117323_+	guanosine monophosphate reductase	A0A1V0SHK8	Klosneuvirus	5.7e-58	32.4
WP_168183368.1\|117671_118673_+	LytR family transcriptional regulator	NA	NA	NA	NA
WP_168183369.1\|118672_119443_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_168183370.1\|119459_120200_+	CpsD/CapB family tyrosine-protein kinase	NA	NA	NA	NA
WP_168183371.1\|120226_120997_+	exopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_137876824.1\|121092_121653_+	sugar transferase	NA	NA	NA	NA
WP_084034357.1\|121731_122565_+	glycosyltransferase	NA	NA	NA	NA
WP_168183372.1\|122856_123699_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.7e-153	97.5
WP_168183373.1\|123752_124004_-\|transposase	transposase	Q6J1X3	Lactobacillus_phage	6.0e-37	95.2
WP_168183374.1\|124181_125216_+	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_168183375.1\|125228_126308_+	EpsG family protein	NA	NA	NA	NA
WP_168183376.1\|126331_127030_+	hypothetical protein	H2E9I3	Persea_americana_alphaendornavirus	1.8e-06	33.8
WP_168183377.1\|127143_128289_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	6.5e-155	97.9
WP_168183378.1\|129065_130532_+	flippase	NA	NA	NA	NA
WP_168183379.1\|131776_132742_+	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	8.9e-12	42.9
WP_168183380.1\|132888_134001_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_168183381.1\|134211_135399_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	3.4e-37	29.3
WP_168183382.1\|136679_137432_+	glycosyl transferase	L7RBS6	Acanthamoeba_polyphaga_moumouvirus	1.2e-08	31.8
WP_080965008.1\|137492_138401_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.9e-11	29.6
WP_168183383.1\|138337_139036_-\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	1.5e-21	31.4
WP_014562466.1\|139562_140561_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_042513914.1\|140754_142041_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168183384.1\|142229_142529_-	hypothetical protein	NA	NA	NA	NA
WP_168183385.1\|142764_143301_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168183386.1\|143297_144185_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.1e-32	41.8
WP_168183387.1\|144255_144762_-	cupin domain-containing protein	NA	NA	NA	NA
WP_035437552.1\|144958_145648_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.8e-35	36.6
WP_151130128.1\|145845_146988_+	GHKL domain-containing protein	W8CYF6	Bacillus_phage	6.5e-30	29.8
WP_168183388.1\|146987_148283_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_035437542.1\|148616_149477_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_003682463.1\|149486_149906_+	AzlD domain-containing protein	NA	NA	NA	NA
WP_138464601.1\|150100_150472_+	esterase	NA	NA	NA	NA
WP_003682466.1\|150814_152002_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_168183389.1\|152241_153492_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.3e-58	37.0
WP_054173697.1\|153565_154021_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	8.1e-32	50.0

DBSCAN-SWA_2

174704 : 209595

Lactobacillus_phage(25.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003684331.1\|174704_175868_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
WP_012390758.1\|175864_176302_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.4e-49	71.0
WP_003682507.1\|176516_177212_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_168183394.1\|177336_178515_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_003682509.1\|178627_179632_+	hypothetical protein	NA	NA	NA	NA
WP_015638511.1\|180122_180494_+	cupredoxin domain-containing protein	NA	NA	NA	NA
WP_048340198.1\|180507_180816_+	copper-binding protein	NA	NA	NA	NA
WP_070447065.1\|180815_182747_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	2.7e-92	37.6
WP_070447063.1\|182858_183224_+	hypothetical protein	NA	NA	NA	NA
WP_003682515.1\|183271_183748_-	nucleoside deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	7.7e-17	35.2
WP_151130148.1\|189596_190736_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.1e-42	33.3
WP_012391038.1\|191517_192768_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_015638493.1\|192841_193297_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	50.0
WP_015638522.1\|193863_194058_-	CsbD family protein	NA	NA	NA	NA
WP_003684232.1\|195026_196007_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_015638518.1\|196704_197361_-	nitroreductase	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	9.3e-13	25.5
WP_070447091.1\|197445_198099_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_111522993.1\|198093_198483_-	tautomerase family protein	NA	NA	NA	NA
WP_083276522.1\|198608_199244_+	DUF4767 domain-containing protein	NA	NA	NA	NA
WP_003684235.1\|200681_201668_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_083276525.1\|201814_203689_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_151130148.1\|203734_204874_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.1e-42	33.3
WP_168183666.1\|204975_205476_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_168183395.1\|205536_206388_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168183396.1\|206491_207679_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.2e-36	28.8
WP_168183397.1\|207815_208271_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	3.6e-32	50.0
WP_012391038.1\|208344_209595_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3

DBSCAN-SWA_3

683505 : 736348

Paenibacillus_phage(18.75%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014562466.1\|683505_684504_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_003682071.1\|684574_684829_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_003682069.1\|685074_685344_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_003684331.1\|686066_687230_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
WP_035430804.1\|687831_689631_+	ribonuclease J	NA	NA	NA	NA
WP_003682061.1\|689721_690618_+	hypothetical protein	NA	NA	NA	NA
WP_003682059.1\|690798_691989_+	elongation factor Tu	A0A1V0SGC3	Hokovirus	6.6e-33	28.0
WP_003682058.1\|692159_693467_+	trigger factor	NA	NA	NA	NA
WP_003682055.1\|693617_694868_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	3.7e-135	57.1
WP_012391020.1\|694881_695475_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_003682052.1\|695474_695774_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A1S7FYY8	Listeria_phage	6.9e-24	51.5
WP_012391021.1\|696040_696187_-	hypothetical protein	NA	NA	NA	NA
WP_003682049.1\|696374_697121_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-28	36.8
WP_003682047.1\|697398_699210_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA
WP_003682046.1\|699274_700582_+	GTPase ObgE	NA	NA	NA	NA
WP_003682045.1\|700608_701541_+	ribonuclease Z	NA	NA	NA	NA
WP_003682044.1\|701561_702401_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_168183435.1\|702473_704771_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	2.6e-70	29.3
WP_003682042.1\|704784_705312_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.3e-30	44.0
WP_003682041.1\|705643_706021_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_003682040.1\|706100_707099_-	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	7.7e-51	36.3
WP_003682039.1\|707600_708410_+	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_054173498.1\|708994_709531_+	NAD(P)H oxidoreductase	NA	NA	NA	NA
WP_054173497.1\|709541_709823_+	hypothetical protein	NA	NA	NA	NA
WP_003682030.1\|709822_710152_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003682029.1\|710499_710808_-	membrane protein	NA	NA	NA	NA
WP_041812672.1\|711509_711857_-	helix-turn-helix transcriptional regulator	E9LUL4	Lactobacillus_phage	2.1e-11	43.9
WP_168183436.1\|712007_713099_-	glycerol dehydrogenase	NA	NA	NA	NA
WP_003682020.1\|713357_713537_+	hypothetical protein	NA	NA	NA	NA
WP_070446897.1\|713903_714764_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_160229510.1\|714763_715324_+	sugar O-acetyltransferase	M1HKK6	Paramecium_bursaria_Chlorella_virus	8.5e-07	48.1
WP_083276512.1\|715390_715786_-	response regulator transcription factor	NA	NA	NA	NA
WP_054173494.1\|716293_717058_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_070446900.1\|717173_718199_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_054173493.1\|718453_719383_+	L(+)-tartrate dehydratase subunit alpha	NA	NA	NA	NA
WP_070446902.1\|719385_719997_+	L(+)-tartrate dehydratase subunit beta	NA	NA	NA	NA
WP_070446904.1\|722942_723308_+	hypothetical protein	NA	NA	NA	NA
WP_168183437.1\|723578_723947_+	hypothetical protein	NA	NA	NA	NA
WP_168183438.1\|724072_725182_-	MFS transporter	NA	NA	NA	NA
WP_127429221.1\|725464_726370_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_021815645.1\|726306_726921_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	9.6e-28	38.0
WP_003682012.1\|727426_729016_-	asparagine synthase B	L7RC73	Acanthamoeba_polyphaga_moumouvirus	3.1e-102	40.3
WP_114684430.1\|730050_731271_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	9.0e-94	46.0
WP_160229604.1\|731655_732666_+	ADP-ribosylglycohydrolase family protein	A0A172WZB4	Catopsilia_pomona_nucleopolyhedrovirus	9.0e-07	22.7
WP_054173488.1\|732671_734030_+	allantoin permease	NA	NA	NA	NA
WP_054173487.1\|734030_734921_+	hypothetical protein	NA	NA	NA	NA
WP_168183439.1\|735286_736348_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	5.9e-33	28.6

DBSCAN-SWA_4

787962 : 848230

Streptococcus_phage(31.25%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015638815.1\|787962_788859_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_070447069.1\|788869_789835_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA
WP_168183443.1\|789949_791338_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_080963705.1\|791456_792155_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-22	31.3
WP_070446813.1\|793386_794724_-	SLC45 family MFS transporter	NA	NA	NA	NA
WP_168183444.1\|794732_796427_-	alpha-glucosidase	NA	NA	NA	NA
WP_070446815.1\|796584_797571_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_070446817.1\|797726_799019_+	Y-family DNA polymerase	M1Q231	Streptococcus_phage	1.9e-81	39.0
WP_054173466.1\|798999_799317_+	hypothetical protein	NA	NA	NA	NA
WP_014562320.1\|799469_800642_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_024271704.1\|802295_803258_+	ketopantoate reductase family protein	NA	NA	NA	NA
WP_003685171.1\|803603_803957_-	DUF1304 domain-containing protein	NA	NA	NA	NA
WP_070446805.1\|803969_804581_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_048340330.1\|804755_806084_-	D-serine ammonia-lyase	NA	NA	NA	NA
WP_048340331.1\|806373_807774_-	amino acid permease	NA	NA	NA	NA
WP_054173465.1\|808039_808327_+\|transposase	transposase	NA	NA	NA	NA
WP_081540415.1\|808350_809229_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.7e-42	36.4
WP_003681906.1\|810069_810435_-	hypothetical protein	NA	NA	NA	NA
WP_014562321.1\|810560_811607_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_014562322.1\|811617_812205_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_048340322.1\|812241_814098_+	molecular chaperone DnaK	A0A2P1EIW2	Megavirus	6.5e-136	45.7
WP_003681899.1\|814209_815370_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	4.8e-20	27.0
WP_023465770.1\|815775_816324_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_003681896.1\|816351_816519_+	hypothetical protein	NA	NA	NA	NA
WP_168183445.1\|816537_817104_+	hypothetical protein	NA	NA	NA	NA
WP_168183446.1\|817311_818151_+	histidinol-phosphatase HisJ	NA	NA	NA	NA
WP_168183447.1\|818472_819633_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_168183448.1\|819625_820240_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_015638837.1\|820241_821525_+	histidinol dehydrogenase	NA	NA	NA	NA
WP_114684280.1\|821526_822111_+	imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_012391116.1\|822110_822719_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_114684279.1\|822715_823441_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_168183449.1\|823430_824204_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_070447030.1\|824185_824503_+	phosphoribosyl-AMP cyclohydrolase	NA	NA	NA	NA
WP_003681874.1\|824504_824825_+	phosphoribosyl-ATP diphosphatase	NA	NA	NA	NA
WP_003681872.1\|824837_825923_+	histidinol-phosphate transaminase	A0A1X6WGT4	Pacmanvirus	7.6e-12	23.5
WP_003685127.1\|825990_827823_+	elongation factor 4	E4ZFJ7	Streptococcus_phage	2.5e-23	26.1
WP_086031824.1\|827996_829283_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_070446809.1\|829815_830319_-	hypothetical protein	NA	NA	NA	NA
WP_003681864.1\|830354_830978_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_137876809.1\|831069_832092_+	aldo/keto reductase	NA	NA	NA	NA
WP_015638841.1\|832351_833425_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.3e-90	48.2
WP_012391124.1\|833436_834612_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	8.4e-89	41.2
WP_054173458.1\|834751_836503_+	hypothetical protein	NA	NA	NA	NA
WP_003685116.1\|836540_836996_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_021349417.1\|837156_837627_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	6.8e-26	42.9
WP_048340136.1\|837619_838813_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.9e-96	48.4
WP_003681853.1\|838799_839408_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.7e-27	39.1
WP_083276508.1\|839407_840466_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.4e-41	33.9
WP_070446807.1\|840875_841361_-	flavodoxin	NA	NA	NA	NA
WP_054173519.1\|842952_843531_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_168183450.1\|843782_844781_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.3e-50	38.4
WP_003685099.1\|844986_846159_+	cysteine desulfurase	NA	NA	NA	NA
WP_012390701.1\|846448_846901_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_035168979.1\|846979_848230_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.0e-56	37.0

DBSCAN-SWA_5

883786 : 930560

Planktothrix_phage(18.18%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003681786.1\|883786_884224_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003681784.1\|884530_885019_+	transcriptional regulator	NA	NA	NA	NA
WP_168183461.1\|885367_886564_+	PLP-dependent transferase	NA	NA	NA	NA
WP_003681779.1\|886538_887666_+	PLP-dependent transferase	NA	NA	NA	NA
WP_070447009.1\|888033_888813_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_048339923.1\|888827_889352_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_021349562.1\|889373_890117_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_015638885.1\|890049_890805_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.7e-31	38.8
WP_015638886.1\|890819_891977_+	amidohydrolase	NA	NA	NA	NA
WP_003688751.1\|892371_892659_+\|transposase	transposase	NA	NA	NA	NA
WP_012391547.1\|892682_893561_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	2.6e-42	36.4
WP_070447011.1\|894671_895970_+	hypothetical protein	NA	NA	NA	NA
WP_035430774.1\|896338_896998_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_057195021.1\|896978_897650_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_012391164.1\|897660_898401_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-37	36.1
WP_021349555.1\|898416_899271_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_070447013.1\|899701_900445_+	glucose 1-dehydrogenase	NA	NA	NA	NA
WP_168183462.1\|900623_901790_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_168183463.1\|901796_902621_-	homoserine O-succinyltransferase	NA	NA	NA	NA
WP_111523599.1\|902954_904328_-	amino acid permease	NA	NA	NA	NA
WP_168183464.1\|904454_905387_+	homocysteine S-methyltransferase	NA	NA	NA	NA
WP_070447017.1\|905464_906304_-	phosphotransferase	NA	NA	NA	NA
WP_070447019.1\|906305_907175_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	8.5e-14	33.3
WP_023467115.1\|907236_908265_-	lipoate--protein ligase	NA	NA	NA	NA
WP_003681741.1\|908641_909937_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_070447021.1\|909940_911716_+\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_021349548.1\|912376_913060_+	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_003684990.1\|913173_913362_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_168183668.1\|913426_913876_+	GatB/YqeY domain-containing protein	A0A0K2FLI9	Brevibacillus_phage	5.4e-12	34.3
WP_014562357.1\|914023_915007_+	PhoH family protein	L7TP00	Rhizobium_phage	9.2e-49	49.3
WP_012391175.1\|915006_915480_+	rRNA maturation RNase YbeY	NA	NA	NA	NA
WP_003681724.1\|915457_915856_+	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_003681722.1\|915869_916775_+	GTPase Era	NA	NA	NA	NA
WP_003681720.1\|916887_917706_+	DNA repair protein RecO	NA	NA	NA	NA
WP_003681718.1\|917973_918948_+\|tRNA	glycine--tRNA ligase subunit alpha	NA	NA	NA	NA
WP_023467105.1\|918947_921026_+\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003684978.1\|921177_923073_+	DNA primase	A0A1S5RFD7	Helicobacter_phage	5.6e-42	32.1
WP_003681711.1\|923072_924215_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.9e-37	36.6
WP_003681709.1\|924421_924616_-	hypothetical protein	NA	NA	NA	NA
WP_070447022.1\|924675_925518_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	3.7e-155	98.2
WP_012391066.1\|925571_925823_-\|transposase	IS3 family transposase	Q6J1X3	Lactobacillus_phage	4.6e-37	95.2
WP_021349446.1\|926118_926679_+	alkaline shock response membrane anchor protein AmaP	NA	NA	NA	NA
WP_003681705.1\|926690_926876_+	DUF2273 domain-containing protein	NA	NA	NA	NA
WP_003681703.1\|926903_927446_+	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_003681701.1\|927460_927712_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA
WP_003681696.1\|927723_927864_+	hypothetical protein	NA	NA	NA	NA
WP_014562466.1\|928081_929080_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
WP_042513914.1\|929273_930560_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

1019360 : 1060395

Bacillus_phage(18.18%)

integrase,transposase,capsid

attL 1011747:1011764|attR 1069591:1069608

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1011747:1011764	attL	NA	NA	NA	NA
WP_107760586.1\|1019360_1020245_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_083276535.1\|1020328_1021807_-	amino acid permease	NA	NA	NA	NA
WP_003684880.1\|1021964_1022996_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA
WP_054173423.1\|1023632_1024274_-	sugar O-acetyltransferase	NA	NA	NA	NA
WP_053069019.1\|1025029_1025542_-	Fic family protein	NA	NA	NA	NA
WP_021349906.1\|1025933_1026491_-	adenine phosphoribosyltransferase	NA	NA	NA	NA
WP_053069020.1\|1026834_1028205_+	MFS transporter	NA	NA	NA	NA
WP_014562398.1\|1029446_1030583_+	aminotransferase	A0A1X6WGT4	Pacmanvirus	2.0e-10	24.3
WP_003683065.1\|1030782_1030923_+	hypothetical protein	NA	NA	NA	NA
WP_003683063.1\|1031123_1031333_+	hypothetical protein	NA	NA	NA	NA
WP_168183478.1\|1031341_1032238_+\|capsid	capsid protein	U3PFU0	Lactobacillus_phage	4.3e-61	46.8
WP_168183479.1\|1032766_1033657_-	alpha/beta hydrolase	Q854G2	Mycobacterium_phage	5.7e-13	26.8
WP_003683058.1\|1033675_1034200_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003683057.1\|1034311_1034494_-	DUF2316 family protein	NA	NA	NA	NA
WP_046025697.1\|1034547_1035474_+	YdcF family protein	NA	NA	NA	NA
WP_024271964.1\|1035507_1036380_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	9.4e-53	43.1
WP_015638975.1\|1036472_1036958_-	ECF transporter S component	NA	NA	NA	NA
WP_048339965.1\|1036973_1037804_-	pyridoxal kinase	NA	NA	NA	NA
WP_012391233.1\|1040005_1041085_+	tyrosine recombinase XerS	A0A0E3XA96	Gordonia_phage	1.6e-06	30.0
WP_003683043.1\|1041086_1042013_+	linear amide C-N hydrolase	NA	NA	NA	NA
WP_160229547.1\|1042040_1043219_-	putative C-S lyase	NA	NA	NA	NA
WP_012391236.1\|1043644_1044697_+	2,3-butanediol dehydrogenase	A0A2K9L7I1	Tupanvirus	7.9e-14	25.9
WP_168183480.1\|1044789_1045749_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_168183481.1\|1045764_1046394_-	ABC transporter permease	NA	NA	NA	NA
WP_021816094.1\|1046390_1047158_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.8e-23	37.6
WP_003683036.1\|1047138_1047783_-	ABC transporter permease	NA	NA	NA	NA
WP_003684836.1\|1047933_1048836_-	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046025694.1\|1048977_1049427_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003683030.1\|1049464_1049890_-	OsmC family protein	NA	NA	NA	NA
WP_070446973.1\|1049889_1050426_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_054173422.1\|1050503_1051097_-	flavodoxin	NA	NA	NA	NA
WP_160229548.1\|1051866_1052490_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_003683018.1\|1052571_1053192_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	3.0e-21	35.3
WP_021349263.1\|1053488_1054268_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_160229564.1\|1054251_1054674_-	triphosphoribosyl-dephospho-CoA synthetase	NA	NA	NA	NA
WP_014562705.1\|1054772_1055960_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_114684404.1\|1057122_1057959_+	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_003683009.1\|1058022_1059144_-	NAD(P)-dependent alcohol dehydrogenase	E3SJ82	Synechococcus_phage	7.6e-23	27.9
WP_081540415.1\|1059205_1060084_-\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	5.7e-42	36.4
WP_054173465.1\|1060107_1060395_-\|transposase	transposase	NA	NA	NA	NA
1069591:1069608	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1106107 : 1159684

Erysipelothrix_phage(29.41%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168183489.1\|1106107_1107358_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	8.1e-58	37.3
WP_168183490.1\|1107577_1108765_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	7.5e-37	29.1
WP_003682943.1\|1109719_1109992_-	hypothetical protein	NA	NA	NA	NA
WP_168183491.1\|1110132_1111245_-	acyltransferase	NA	NA	NA	NA
WP_168183492.1\|1111724_1112555_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_012391286.1\|1114489_1115674_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_048340145.1\|1115825_1116314_+	hypothetical protein	NA	NA	NA	NA
WP_021815645.1\|1117077_1117692_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	9.6e-28	38.0
WP_168183493.1\|1118358_1124127_-	KxYKxGKxW signal peptide domain-containing protein	NA	NA	NA	NA
WP_046949115.1\|1124255_1125281_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-42	35.1
WP_048340052.1\|1125297_1125543_+	hypothetical protein	NA	NA	NA	NA
WP_048340053.1\|1126314_1126608_+	HigA family addiction module antidote protein	NA	NA	NA	NA
WP_035426165.1\|1126698_1126983_-	membrane protein	NA	NA	NA	NA
WP_015639063.1\|1128410_1129742_-	guanine deaminase	NA	NA	NA	NA
WP_087908060.1\|1129863_1131015_-	ArgE/DapE family deacylase	NA	NA	NA	NA
WP_168161909.1\|1131275_1131425_-	hypothetical protein	NA	NA	NA	NA
WP_046948998.1\|1131927_1132344_-	arsenate reductase ArsC	A0A2H4PQT9	Staphylococcus_phage	1.1e-14	36.6
WP_012390701.1\|1132764_1133217_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5
WP_003684310.1\|1133295_1134546_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.6e-56	37.0
WP_168183494.1\|1135112_1135541_-	NADH-dependent oxidoreductase	NA	NA	NA	NA
WP_003682915.1\|1135655_1136162_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003682913.1\|1136213_1136981_-	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA
WP_003682911.1\|1136973_1137615_-	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	5.5e-18	30.6
WP_070955615.1\|1138009_1139692_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_168183495.1\|1140250_1140790_-	DUF4256 domain-containing protein	NA	NA	NA	NA
WP_130125205.1\|1141145_1141898_-	hypothetical protein	NA	NA	NA	NA
WP_015639076.1\|1142080_1142641_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_168183496.1\|1142988_1145979_-	DEAD/DEAH box helicase family protein	A0A2K5B2C2	Erysipelothrix_phage	0.0e+00	70.8
WP_168183669.1\|1145999_1147829_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	4.8e-200	58.3
WP_072534687.1\|1147925_1148648_-	DUF4391 family protein	A0A2K5B2C0	Erysipelothrix_phage	5.9e-69	50.9
WP_168183497.1\|1148648_1151906_-	DEAD/DEAH box helicase family protein	A0A2K5B2B9	Erysipelothrix_phage	0.0e+00	80.7
WP_002403339.1\|1151952_1152153_-	helix-turn-helix transcriptional regulator	A0A2K5B261	Erysipelothrix_phage	2.4e-12	55.6
WP_168183498.1\|1152980_1154147_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.5e-37	29.1
WP_168183499.1\|1154181_1155402_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	2.1e-95	46.5
WP_168183500.1\|1155850_1156183_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	1.2e-11	40.0
WP_127429488.1\|1156179_1156545_-	CrcB family protein	NA	NA	NA	NA
WP_004563103.1\|1156669_1157062_+	glyoxalase	NA	NA	NA	NA
WP_003683563.1\|1157136_1157694_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_168183501.1\|1157968_1159684_+	AarF/ABC1/UbiB kinase family protein	M4QMK7	Micromonas_pusilla_virus	1.1e-28	29.7

DBSCAN-SWA_8

1246800 : 1290585

Streptococcus_phage(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042513934.1\|1246800_1247256_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	1.8e-31	49.3
WP_012391038.1\|1247329_1248580_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_003683372.1\|1248837_1249701_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_168183509.1\|1249957_1251349_+	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_024500988.1\|1251364_1252606_+	MFS transporter	NA	NA	NA	NA
WP_003683364.1\|1252769_1254158_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_168183510.1\|1254344_1255571_+	MFS transporter	NA	NA	NA	NA
WP_070955650.1\|1255702_1255990_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168183511.1\|1255962_1256151_-	hypothetical protein	NA	NA	NA	NA
WP_114684108.1\|1256318_1256585_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168183512.1\|1256604_1257726_-	lipolytic protein G-D-S-L family protein	NA	NA	NA	NA
WP_021350286.1\|1257780_1258800_-	lipoate--protein ligase	NA	NA	NA	NA
WP_003683354.1\|1258828_1260235_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	7.3e-47	28.8
WP_021350287.1\|1260241_1261576_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_014562491.1\|1261591_1262569_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_014562492.1\|1262571_1263663_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA
WP_003683348.1\|1264615_1264942_-	branched-chain amino acid transporter AzlD	NA	NA	NA	NA
WP_168183513.1\|1264938_1265640_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_168183514.1\|1265647_1267156_-	threonine synthase	NA	NA	NA	NA
WP_014562494.1\|1267270_1268548_+	homoserine dehydrogenase	NA	NA	NA	NA
WP_003683341.1\|1268557_1269418_+	homoserine kinase	NA	NA	NA	NA
WP_004563200.1\|1269649_1270174_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_168183515.1\|1270274_1270916_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_024500994.1\|1271038_1271695_+	HD domain-containing protein	A0A1S5V2G8	Saudi_moumouvirus	2.9e-06	27.9
WP_168183516.1\|1271691_1272435_-	peroxide stress protein YaaA	NA	NA	NA	NA
WP_168183517.1\|1272708_1273320_-	hypothetical protein	NA	NA	NA	NA
WP_049184895.1\|1273316_1274195_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	1.2e-15	38.2
WP_168183518.1\|1274385_1276092_+	fibronectin/fibrinogen-binding protein	M1I5P2	Paramecium_bursaria_Chlorella_virus	2.5e-09	36.2
WP_003684310.1\|1276246_1277497_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.6e-56	37.0
WP_151130340.1\|1277791_1278949_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.3e-37	29.1
WP_003617037.1\|1279093_1279729_+	carbonic anhydrase family protein	NA	NA	NA	NA
WP_048340116.1\|1279921_1282426_-	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_015639171.1\|1282427_1283510_-	carbamoyl phosphate synthase small subunit	NA	NA	NA	NA
WP_054173511.1\|1283539_1284415_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_021350105.1\|1284455_1284893_-	signal peptidase II	NA	NA	NA	NA
WP_003683310.1\|1284892_1285327_-	hypothetical protein	NA	NA	NA	NA
WP_003683308.1\|1285339_1285741_+	ribonuclease HI family protein	NA	NA	NA	NA
WP_004563210.1\|1285896_1286499_-	nitroreductase family protein	NA	NA	NA	NA
WP_003683304.1\|1286722_1287586_-	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_012391396.1\|1287799_1288489_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_080662961.1\|1288575_1289274_-	glycosyltransferase	NA	NA	NA	NA
WP_003688751.1\|1289395_1289683_+\|transposase	transposase	NA	NA	NA	NA
WP_168183672.1\|1289706_1290585_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.4e-40	34.9

DBSCAN-SWA_9

1370136 : 1456968

Lactobacillus_phage(75.93%)

protease,plate,integrase,portal,tail,tRNA,head,capsid,terminase,transposase

attL 1389013:1389031|attR 1445605:1445623

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003683834.1\|1370136_1371087_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.5e-11	32.7
WP_021349886.1\|1371109_1373527_-	primosomal protein N'	NA	NA	NA	NA
WP_015639220.1\|1373498_1374728_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.5e-48	37.5
WP_003686267.1\|1374798_1375083_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_003683827.1\|1375079_1375700_-	guanylate kinase	A0A0M5KCK5	Mollivirus	2.2e-11	38.9
WP_035423994.1\|1375892_1376210_+	hypothetical protein	NA	NA	NA	NA
WP_003684331.1\|1376343_1377507_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	Q5ULQ4	Lactobacillus_virus	1.8e-160	71.7
WP_003686264.1\|1378120_1379815_-	DNA repair protein RecN	NA	NA	NA	NA
WP_003683822.1\|1379832_1380282_-	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_003683820.1\|1380295_1381111_-	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_003683815.1\|1381120_1381996_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003683813.1\|1381995_1382289_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_003683812.1\|1382288_1383737_-	exodeoxyribonuclease VII large subunit	A0A1V0SIT1	Klosneuvirus	2.8e-33	30.7
WP_003683810.1\|1383737_1384595_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	8.4e-38	38.9
WP_003683805.1\|1384772_1385192_-	transcription antitermination factor NusB	NA	NA	NA	NA
WP_003683803.1\|1385191_1385632_-	Asp23/Gls24 family envelope stress response protein	NA	NA	NA	NA
WP_070447166.1\|1385722_1386799_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_003683800.1\|1386884_1387166_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_003683798.1\|1387189_1387513_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003683797.1\|1387525_1387834_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_012391458.1\|1387997_1388639_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
1389013:1389031	attL	NA	NA	NA	NA
WP_168183349.1\|1389052_1389274_+	hypothetical protein	E9LUK5	Lactobacillus_phage	1.8e-05	96.0
WP_168183523.1\|1389383_1391999_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_168183524.1\|1391998_1394008_-	site-specific DNA-methyltransferase	H6W8D6	Escherichia_phage	8.2e-44	32.4
WP_021349944.1\|1394292_1394451_-	hypothetical protein	A0A0A7NU07	Lactobacillus_phage	3.4e-14	80.8
WP_168183525.1\|1394486_1395611_-	LysM peptidoglycan-binding domain-containing protein	U3PJ04	Lactobacillus_phage	3.4e-39	42.4
WP_168183526.1\|1395610_1396018_-	hypothetical protein	A0A0A1ELI5	Lactobacillus_phage	1.6e-23	50.0
WP_168183527.1\|1396020_1396299_-	hypothetical protein	D2KRC5	Lactobacillus_phage	2.8e-27	72.8
WP_168183528.1\|1396359_1397049_-	hypothetical protein	E9LUK0	Lactobacillus_phage	5.6e-69	70.9
WP_168183529.1\|1397062_1398184_-\|plate	BppU family phage baseplate upper protein	E9LUJ9	Lactobacillus_phage	2.7e-177	88.2
WP_168183530.1\|1398197_1399271_-	SGNH/GDSL hydrolase family protein	E9LUJ8	Lactobacillus_phage	4.5e-174	83.8
WP_168183531.1\|1399283_1399538_-	hypothetical protein	E9LUJ7	Lactobacillus_phage	1.3e-31	86.9
WP_168183532.1\|1399540_1399723_-	hypothetical protein	E9LUJ6	Lactobacillus_phage	2.5e-16	81.7
WP_168183533.1\|1399715_1405073_-	hypothetical protein	E9LUJ5	Lactobacillus_phage	6.5e-205	76.6
WP_168183534.1\|1405020_1406865_-	peptidoglycan DD-metalloendopeptidase family protein	E9LUJ4	Lactobacillus_phage	1.4e-111	35.1
WP_168183535.1\|1406865_1407699_-\|tail	phage tail family protein	A0A0M7RF73	Lactobacillus_phage	6.6e-40	35.7
WP_168183536.1\|1407716_1413392_-\|tail	phage tail tape measure protein	F8J1C3	Lactobacillus_phage	9.0e-88	50.3
WP_046948826.1\|1413613_1414018_-	hypothetical protein	NA	NA	NA	NA
WP_112296905.1\|1414180_1414834_-\|tail	phage tail protein	E9LUQ8	Lactobacillus_phage	1.5e-55	57.8
WP_168183537.1\|1414826_1415222_-	DUF806 family protein	NA	NA	NA	NA
WP_114684067.1\|1415221_1415665_-	hypothetical protein	F8J1B8	Lactobacillus_phage	3.1e-12	33.6
WP_168183538.1\|1415657_1416014_-\|head,tail	head-tail adaptor protein	E9LUQ5	Lactobacillus_phage	4.4e-25	47.9
WP_168183539.1\|1415976_1416360_-\|head,tail	phage gp6-like head-tail connector protein	F8J1B6	Lactobacillus_phage	1.7e-14	42.9
WP_146624324.1\|1416375_1416558_-	hypothetical protein	NA	NA	NA	NA
WP_168183540.1\|1416623_1417763_-\|capsid	phage major capsid protein	A0A0C5AEH1	Paenibacillus_phage	4.7e-113	59.1
WP_046948832.1\|1417764_1418532_-\|protease	Clp protease ClpP	F8J1B3	Lactobacillus_phage	1.5e-67	58.8
WP_168183541.1\|1418479_1419772_-\|portal	phage portal protein	F8J1B2	Lactobacillus_phage	2.0e-107	48.3
WP_168183542.1\|1419973_1421764_-\|terminase	terminase large subunit	F8J1B1	Lactobacillus_phage	4.3e-238	65.1
WP_046948834.1\|1421738_1422203_-\|terminase	phage terminase small subunit P27 family	F8J1A9	Lactobacillus_phage	7.5e-25	43.6
WP_168183543.1\|1422635_1422971_-	HNH endonuclease	F8J1B0	Lactobacillus_phage	6.0e-16	40.7
WP_168183544.1\|1423043_1424213_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_168183673.1\|1424605_1425367_-	site-specific DNA-methyltransferase	A0A2P0ZL38	Lactobacillus_phage	4.5e-67	55.5
WP_057194918.1\|1425772_1425979_+	CsbD family protein	NA	NA	NA	NA
WP_165844496.1\|1426053_1427025_-	hypothetical protein	Q7Y4L3	Streptococcus_phage	2.1e-05	30.0
WP_168183545.1\|1427516_1428035_-	hypothetical protein	NA	NA	NA	NA
WP_114684078.1\|1428103_1428553_-	hypothetical protein	A0A0A1ERD2	Lactobacillus_phage	2.8e-45	63.2
WP_168183546.1\|1428715_1428973_-	hypothetical protein	A0A2K9VD68	Lactobacillus_phage	6.2e-05	39.0
WP_168183547.1\|1428984_1429305_-	hypothetical protein	NA	NA	NA	NA
WP_168183548.1\|1429328_1429811_-	DUF1064 domain-containing protein	A0A1I9KKZ1	Lactobacillus_phage	7.0e-26	40.0
WP_023467091.1\|1429813_1430011_-	helix-turn-helix transcriptional regulator	Q6SE98	Lactobacillus_prophage	1.6e-05	41.3
WP_168183549.1\|1430742_1430898_-	hypothetical protein	D2KRE6	Lactobacillus_phage	4.0e-15	76.6
WP_168183550.1\|1431045_1431837_-	ATP-binding protein	E9LUM7	Lactobacillus_phage	3.7e-80	59.1
WP_168183551.1\|1431851_1432622_-	replication protein	A0A1W6JNI1	Staphylococcus_phage	3.2e-65	56.3
WP_168183552.1\|1432618_1433317_-	hypothetical protein	E9LUU3	Lactobacillus_phage	4.2e-56	50.2
WP_168183553.1\|1433320_1433959_-	single-stranded DNA-binding protein	E9LUM5	Lactobacillus_phage	9.3e-34	64.2
WP_168183554.1\|1433959_1434808_-	hypothetical protein	E9LUM4	Lactobacillus_phage	7.7e-161	93.3
WP_168183555.1\|1434800_1435814_-	recombinase RecT	E9LUM3	Lactobacillus_phage	1.6e-133	78.0
WP_168183556.1\|1435783_1435993_-	hypothetical protein	E9LUM2	Lactobacillus_phage	4.1e-23	72.5
WP_168183557.1\|1436029_1436188_-	hypothetical protein	NA	NA	NA	NA
WP_168183558.1\|1436180_1436318_-	hypothetical protein	E9LUM0	Lactobacillus_phage	3.0e-06	62.2
WP_057727928.1\|1436329_1436656_-	hypothetical protein	E9LUL9	Lactobacillus_phage	2.3e-57	97.2
WP_168183559.1\|1436715_1436982_+	hypothetical protein	NA	NA	NA	NA
WP_168183560.1\|1437102_1437885_-	phage regulatory protein	E9LUL6	Lactobacillus_phage	5.2e-119	84.0
WP_168183561.1\|1437881_1438112_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168183562.1\|1438293_1438623_+	helix-turn-helix transcriptional regulator	A0A1B0Y2R0	Lactobacillus_phage	1.9e-19	51.0
WP_168183563.1\|1438632_1439022_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_168183564.1\|1439071_1439404_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_168183565.1\|1439415_1439730_+	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_168183566.1\|1439785_1440313_+	hypothetical protein	NA	NA	NA	NA
WP_046949114.1\|1441041_1441587_+	DUF5067 domain-containing protein	H9A0K2	Staphylococcus_phage	6.8e-09	34.2
WP_168183350.1\|1441724_1442279_+	hypothetical protein	E9LUL0	Lactobacillus_phage	1.6e-26	92.5
WP_168183567.1\|1442285_1442489_+	hypothetical protein	E9LUL0	Lactobacillus_phage	4.5e-19	69.2
WP_168183568.1\|1442567_1443602_+	hypothetical protein	NA	NA	NA	NA
WP_057727945.1\|1443562_1444441_+	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_168183569.1\|1444515_1445604_+\|integrase	site-specific integrase	E9LUK6	Lactobacillus_phage	1.3e-200	98.3
WP_014562466.1\|1446247_1447246_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	1.7e-50	38.4
1445605:1445623	attR	NA	NA	NA	NA
WP_168183570.1\|1447439_1448726_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_003683795.1\|1448766_1449300_-	hypothetical protein	NA	NA	NA	NA
WP_168183571.1\|1449292_1450261_-	hypothetical protein	NA	NA	NA	NA
WP_003686245.1\|1450253_1451147_-	hypothetical protein	NA	NA	NA	NA
WP_003686242.1\|1451716_1453069_-	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_015639231.1\|1453267_1454191_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003683779.1\|1454289_1454466_+	DUF3042 family protein	NA	NA	NA	NA
WP_003686239.1\|1454645_1455065_-	rhodanese-like domain-containing protein	NA	NA	NA	NA
WP_096494315.1\|1455089_1456052_-	ROK family glucokinase	NA	NA	NA	NA
WP_003683770.1\|1456069_1456306_-	YqgQ family protein	NA	NA	NA	NA
WP_069775653.1\|1456302_1456968_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA

DBSCAN-SWA_10

1773795 : 1830825

Bacillus_phage(12.5%)

integrase,transposase

attL 1770411:1770432|attR 1827635:1827656

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1770411:1770432	attL	NA	NA	NA	NA
WP_046949115.1\|1773795_1774821_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.3e-42	35.1
WP_168183612.1\|1774974_1775769_+	acetoin reductase	Q06VL0	Trichoplusia_ni_ascovirus	1.2e-11	27.6
WP_168183613.1\|1776149_1776470_-	hypothetical protein	NA	NA	NA	NA
WP_168183614.1\|1776471_1777257_-	ParA family protein	A0A0K2FLP4	Brevibacillus_phage	1.5e-17	32.1
WP_168183677.1\|1777294_1778275_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168183615.1\|1779513_1779807_-	hypothetical protein	NA	NA	NA	NA
WP_168183616.1\|1780736_1781354_-	hypothetical protein	NA	NA	NA	NA
WP_168183617.1\|1781573_1782803_+\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	3.8e-92	45.6
WP_003681444.1\|1783412_1784000_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	2.8e-24	41.6
WP_012391637.1\|1784220_1786179_-	PTS beta-glucoside transporter subunit IIBCA	NA	NA	NA	NA
WP_031284350.1\|1786327_1787338_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_003681441.1\|1787859_1789332_+	sucrose-6-phosphate hydrolase	S6ATV4	Bacillus_phage	3.7e-17	23.6
WP_168183618.1\|1789344_1790721_+	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_004562894.1\|1791000_1791909_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003681437.1\|1791945_1792815_-	hypothetical protein	NA	NA	NA	NA
WP_003681434.1\|1792885_1793491_+	hypothetical protein	NA	NA	NA	NA
WP_168183619.1\|1793737_1795234_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_012391644.1\|1795651_1796572_+	penicillin-binding protein	NA	NA	NA	NA
WP_168183620.1\|1796916_1798170_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_160229759.1\|1798310_1798859_-	hypothetical protein	NA	NA	NA	NA
WP_070447503.1\|1799038_1800070_+	lactonase family protein	NA	NA	NA	NA
WP_087907893.1\|1800162_1800750_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003681416.1\|1800746_1801058_-	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_168183621.1\|1801066_1804063_-	DEAD/DEAH box helicase	Q6VT37	Vibrio_phage	6.3e-16	27.3
WP_003681411.1\|1804075_1804492_-	(deoxy)nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_070447497.1\|1804544_1805090_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_168183622.1\|1805230_1806664_+	MFS transporter	NA	NA	NA	NA
WP_003681402.1\|1806649_1806865_-	hypothetical protein	NA	NA	NA	NA
WP_003681399.1\|1807189_1807918_+	WYL domain-containing protein	NA	NA	NA	NA
WP_003681397.1\|1808020_1808254_+	cytochrome b5	NA	NA	NA	NA
WP_003681394.1\|1808637_1809114_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_003681392.1\|1809174_1810290_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	2.7e-73	40.9
WP_168183623.1\|1810721_1811102_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_014562645.1\|1811170_1812181_-	aspartate--ammonia ligase	NA	NA	NA	NA
WP_003681382.1\|1812374_1812971_+	glycoside hydrolase family 73 protein	A0A0A7RUS8	Clostridium_phage	5.3e-23	43.4
WP_004562874.1\|1812989_1813511_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_168183624.1\|1813807_1815328_+	LytTR family transcriptional regulator	O64031	Bacillus_phage	2.5e-32	25.5
WP_003681375.1\|1815324_1815783_+	hypothetical protein	NA	NA	NA	NA
WP_004562871.1\|1816028_1816451_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_003681371.1\|1816727_1817462_+	5-oxoprolinase subunit PxpB	NA	NA	NA	NA
WP_003681368.1\|1818480_1818909_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA
WP_003681367.1\|1818880_1820269_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA
WP_168183625.1\|1820255_1821005_+	5-oxoprolinase subunit PxpA	NA	NA	NA	NA
WP_024501183.1\|1821017_1822229_+	divalent metal cation transporter	NA	NA	NA	NA
WP_168183626.1\|1823684_1824140_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	8.1e-32	49.3
WP_168183627.1\|1824213_1825464_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	6.2e-58	37.5
WP_087908372.1\|1826194_1827526_-	NAD(P)/FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	1.5e-22	24.0
WP_003681362.1\|1827679_1827994_-	thioredoxin	A0A1J0GW78	Streptomyces_phage	1.4e-14	39.6
1827635:1827656	attR	NA	NA	NA	NA
WP_035168979.1\|1829043_1830294_-\|transposase	transposase	A0A286QQE5	Streptococcus_phage	2.0e-56	37.0
WP_012390701.1\|1830372_1830825_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.8e-32	51.5

DBSCAN-SWA_11

1860167 : 1912628

Streptococcus_phage(30.77%)

integrase,transposase

attL 1847581:1847601|attR 1890840:1890860

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1847581:1847601	attL	NA	NA	NA	NA
WP_168183626.1\|1860167_1860623_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	8.1e-32	49.3
WP_168183627.1\|1860696_1861947_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	6.2e-58	37.5
WP_168183633.1\|1862349_1863624_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	8.4e-18	24.1
WP_168183634.1\|1863616_1863823_-	DUF3173 family protein	NA	NA	NA	NA
WP_081540359.1\|1863989_1865129_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	1.0e-43	33.6
WP_160229773.1\|1867028_1868027_-	hypothetical protein	NA	NA	NA	NA
WP_151130441.1\|1868069_1868255_-	hypothetical protein	NA	NA	NA	NA
WP_160229774.1\|1868314_1869631_-	DUF3450 domain-containing protein	NA	NA	NA	NA
WP_168183635.1\|1870373_1870805_-	hypothetical protein	NA	NA	NA	NA
WP_015639502.1\|1872302_1873856_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.0e-17	28.0
WP_015639503.1\|1874168_1874780_+	PpGpp synthetase/hydrolase catalytic subunit	NA	NA	NA	NA
WP_168183636.1\|1874793_1875465_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-18	29.6
WP_168183637.1\|1875477_1876731_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_100184299.1\|1877045_1877969_-	type I pantothenate kinase	NA	NA	NA	NA
WP_168183638.1\|1878079_1878631_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_168183639.1\|1878850_1879600_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_168183640.1\|1879888_1881982_-	LTA synthase family protein	W6LM83	Streptococcus_phage	6.8e-150	45.3
WP_168183641.1\|1882215_1883121_+	DMT family transporter	NA	NA	NA	NA
WP_003685331.1\|1883213_1885508_-	ATP-binding domain-containing protein	NA	NA	NA	NA
WP_003681298.1\|1885690_1886347_+	membrane protein	NA	NA	NA	NA
WP_003685336.1\|1886471_1887116_+	histidine phosphatase family protein	NA	NA	NA	NA
WP_168183642.1\|1887137_1888415_+	GTPase HflX	NA	NA	NA	NA
WP_048339996.1\|1888636_1889746_+	o-succinylbenzoate synthase	NA	NA	NA	NA
WP_070447851.1\|1889807_1890530_-	nicotinamide mononucleotide transporter	G3BLP7	Salmonella_phage	1.5e-11	24.3
WP_041807893.1\|1890878_1892477_-	APC family permease	NA	NA	NA	NA
1890840:1890860	attR	NA	NA	NA	NA
WP_168183643.1\|1892585_1893575_-	D-2-hydroxyacid dehydrogenase	M1H9J0	Paramecium_bursaria_Chlorella_virus	8.4e-42	33.7
WP_168183644.1\|1893638_1894751_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	3.9e-27	32.2
WP_168183678.1\|1894750_1895854_-	beta-glucanase	NA	NA	NA	NA
WP_168183679.1\|1895907_1897215_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_168183645.1\|1897214_1897385_-	hypothetical protein	NA	NA	NA	NA
WP_168183646.1\|1897384_1898251_-	hypothetical protein	NA	NA	NA	NA
WP_168183647.1\|1898476_1901188_-	YhgE/Pip domain-containing protein	NA	NA	NA	NA
WP_048340276.1\|1901226_1901763_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_012391698.1\|1901988_1903032_+	galactose mutarotase	NA	NA	NA	NA
WP_015639517.1\|1903284_1904202_-	hypothetical protein	NA	NA	NA	NA
WP_021350176.1\|1904213_1904693_-	hypothetical protein	NA	NA	NA	NA
WP_003681269.1\|1904793_1905243_-	transcriptional repressor	NA	NA	NA	NA
WP_003681268.1\|1905283_1905868_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	5.9e-11	29.9
WP_003685361.1\|1905867_1906284_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_003681266.1\|1906384_1907773_+	amino acid permease	NA	NA	NA	NA
WP_014562675.1\|1908259_1910656_+	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA
WP_012391038.1\|1910848_1912099_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A286QQE5	Streptococcus_phage	1.4e-57	37.3
WP_168183648.1\|1912172_1912628_+\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	8.9e-31	48.6

DBSCAN-SWA_12

1975257 : 2040198

Paenibacillus_phage(30.77%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168183383.1\|1975257_1975956_+\|transposase	transposase	A0A0C5AJ29	Paenibacillus_phage	1.5e-21	31.4
WP_080965008.1\|1975892_1976801_+\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.9e-11	29.6
WP_014562701.1\|1977100_1978111_-	nickel transporter NixA	NA	NA	NA	NA
WP_021349213.1\|1978139_1978967_-	ATP-dependent sacrificial sulfur transferase LarE	NA	NA	NA	NA
WP_012391743.1\|1978991_1979702_-	aquaporin family protein	NA	NA	NA	NA
WP_012391744.1\|1979703_1981068_-	nickel pincer cofactor biosynthesis protein LarC	NA	NA	NA	NA
WP_012391745.1\|1981067_1981826_-	nickel pincer cofactor biosynthesis protein LarB	A0A288TYA6	Enterococcus_phage	3.7e-21	47.2
WP_012391746.1\|1981833_1983117_-	nickel-dependent lactate racemase	NA	NA	NA	NA
WP_023466300.1\|1983357_1984029_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_014562705.1\|1986113_1987301_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1
WP_101888892.1\|1988566_1990288_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_003681137.1\|1990475_1991804_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_012391750.1\|1991818_1992214_-	D-ribose pyranase	NA	NA	NA	NA
WP_168183654.1\|1992237_1993155_-	ribokinase	NA	NA	NA	NA
WP_014562707.1\|1993400_1994360_-	sugar-binding transcriptional regulator	NA	NA	NA	NA
WP_012391752.1\|1994463_1995117_+	deoxyribose-phosphate aldolase	NA	NA	NA	NA
WP_003685477.1\|1995130_1996147_+	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003685479.1\|1996180_1997128_+	ribokinase	NA	NA	NA	NA
WP_014562709.1\|1997187_1998612_-	PTS galactitol transporter subunit IIC	NA	NA	NA	NA
WP_014562710.1\|1998809_1999814_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_021350294.1\|2000367_2001873_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_003681120.1\|2002332_2002767_-	hypothetical protein	NA	NA	NA	NA
WP_014562712.1\|2003046_2005446_-	phosphoketolase family protein	NA	NA	NA	NA
WP_012391758.1\|2005651_2006449_-	HAD family hydrolase	NA	NA	NA	NA
WP_003685491.1\|2006455_2007184_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_003681115.1\|2007327_2007828_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_003681114.1\|2007831_2008575_+	hypothetical protein	NA	NA	NA	NA
WP_100184165.1\|2008634_2010071_+	C69 family dipeptidase	NA	NA	NA	NA
WP_014562716.1\|2010306_2011119_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_014562717.1\|2011384_2011900_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_003685499.1\|2011909_2012437_-	hypothetical protein	NA	NA	NA	NA
WP_003681106.1\|2012585_2013971_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_003681105.1\|2014057_2014522_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA
WP_035430687.1\|2014766_2015198_-	VOC family protein	NA	NA	NA	NA
WP_048340025.1\|2015390_2016560_+	MFS transporter	NA	NA	NA	NA
WP_003685507.1\|2017050_2018532_+	glucose-6-phosphate dehydrogenase	M4SIY3	Cyanophage	4.0e-72	36.9
WP_023467422.1\|2018716_2020156_+	NADP-dependent phosphogluconate dehydrogenase	E3SPS4	Prochlorococcus_phage	1.1e-29	30.2
WP_003685511.1\|2020521_2020995_-	universal stress protein	NA	NA	NA	NA
WP_048340441.1\|2021156_2021612_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_048340442.1\|2021770_2022538_+	glucose 1-dehydrogenase	Q06VL0	Trichoplusia_ni_ascovirus	1.6e-16	31.5
WP_160229794.1\|2022554_2023556_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_168183655.1\|2023827_2025636_-	oligoendopeptidase F	NA	NA	NA	NA
WP_003681091.1\|2025638_2026931_-	cation:dicarboxylase symporter family transporter	NA	NA	NA	NA
WP_003681090.1\|2027178_2027850_+	membrane protein	NA	NA	NA	NA
WP_114684234.1\|2028254_2029323_+\|transposase	IS3 family transposase	A0A1P8CWQ3	Bacillus_phage	1.3e-35	33.6
WP_114684233.1\|2029504_2031184_+	D-lactate dehydrogenase	NA	NA	NA	NA
WP_107760586.1\|2031319_2032204_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_050755181.1\|2032191_2032812_-	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.4e-28	37.9
WP_004562986.1\|2033478_2034138_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	8.1e-41	43.3
WP_003685528.1\|2035886_2036468_+	recombinase family protein	A0A1V0E035	Clostridioides_phage	1.7e-21	34.9
WP_168183656.1\|2036796_2037468_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.9e-29	35.9
WP_003685525.1\|2037472_2038519_-	ABC transporter permease	NA	NA	NA	NA
WP_168183657.1\|2039010_2040198_-\|transposase	IS256 family transposase	A0A0K2CZ57	Paenibacillus_phage	4.4e-37	29.1

DBSCAN-SWA_13

2056222 : 2065310

Brazilian_cedratvirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003682216.1\|2056222_2057161_+	hypothetical protein	A0A2R8FDS8	Brazilian_cedratvirus	7.0e-30	33.2
WP_003682220.1\|2057162_2057645_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_003682221.1\|2057861_2058656_+	nicotinamide mononucleotide transporter	A0A0C5K6M3	Enterococcus_phage	5.8e-25	33.1
WP_003685559.1\|2058762_2059272_-	O-acetyl-ADP-ribose deacetylase	A0A0K1L687	Scale_drop_disease_virus	1.9e-37	50.0
WP_021353558.1\|2059280_2061185_-	peptidase M13	E3T4I7	Cafeteria_roenbergensis_virus	3.4e-71	29.8
WP_003685564.1\|2061321_2062632_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	1.0e-47	33.7
WP_003685567.1\|2062728_2063022_-	hypothetical protein	NA	NA	NA	NA
WP_168183681.1\|2063014_2064175_-	hypothetical protein	NA	NA	NA	NA
WP_114807157.1\|2064167_2065310_-	AAA domain-containing protein	A0A141HRX4	Bacillus_phage	2.9e-22	31.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050919

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection