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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050975 Streptomyces sp. RPA4-2 chromosome, complete genome 11 crisprs WYL,csa3,casR,DEDDh,cas4,Cas9_archaeal,cas3,DinG,c2c10_CAS-V-U3,Cas14u_CAS-V,c2c9_V-U4,RT 1 3 7 0

Results visualization

1. NZ_CP050975
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_1 282600-282794 Orphan NA
4 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_2 356494-356597 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_3 2283962-2284075 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_4 2733155-2733333 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_5 2790146-2790245 Orphan NA
1 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_6 2942609-2942692 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_7 3609521-3609645 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_8 5383503-5383602 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_9 5453677-5453798 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_10 7958185-7958273 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050975_11 8275539-8275671 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP050975.1 587891-587911 2 0.905
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP050975.1 2732590-2732610 2 0.905
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP050975.1 6940919-6940939 2 0.905

1. spacer 1.2|282666|21|NZ_CP050975|CRT matches to position: 587891-587911, mismatch: 2, identity: 0.905

gccgcctacgccacggccgac	CRISPR spacer
gccgcctacgccaaggcctac	Protospacer
************* **** **

2. spacer 1.2|282666|21|NZ_CP050975|CRT matches to position: 2732590-2732610, mismatch: 2, identity: 0.905

gccgcctacgccacggccgac	CRISPR spacer
gccgccgacgccgcggccgac	Protospacer
****** *****.********

3. spacer 1.2|282666|21|NZ_CP050975|CRT matches to position: 6940919-6940939, mismatch: 2, identity: 0.905

gccgcctacgccacggccgac	CRISPR spacer
gccccctacgccaccgccgac	Protospacer
*** ********** ******

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP030763 Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence 25339-25359 1 0.952
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP054026 Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence 124888-124908 1 0.952
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 CP016642 Mycobacterium sp. djl-10 plasmid djl-10_2, complete sequence 3598-3618 1 0.952
NZ_CP050975_1 1.2|282666|21|NZ_CP050975|CRT 282666-282686 21 NZ_CP054036 Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence 250932-250952 1 0.952
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP044283 Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence 336235-336258 2 0.917
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP015742 Shinella sp. HZN7 plasmid pShin-06, complete sequence 75463-75486 2 0.917
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 60676-60699 2 0.917
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NC_016588 Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence 69891-69914 2 0.917
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_LR134452 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence 492-515 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP013110 Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence 983718-983741 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NC_024970 Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence 62018-62041 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP015523 Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence 167718-167741 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_KJ396772 Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence 62018-62041 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP009405 Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence 47365-47388 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP015738 Shinella sp. HZN7 plasmid pShin-02, complete sequence 173355-173378 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 3579075-3579098 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP044425 Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence 330224-330247 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 27186-27209 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP020440 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence 29961-29984 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP020441 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence 64831-64854 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP020441 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence 84297-84320 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP020447 Paracoccus yeei strain FDAARGOS_252 plasmid unnamed7, complete sequence 113788-113811 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP024986 Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence 179036-179059 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP040096 Pantoea sp. SO10 plasmid unnamed1, complete sequence 55303-55326 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 CP000662 Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence 293221-293244 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 323752-323775 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP038146 Streptomyces sp. S501 plasmid unnamed, complete sequence 58330-58353 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP023408 Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence 835722-835745 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP042264 Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence 163408-163431 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP009112 Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence 251221-251244 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP009112 Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence 251950-251973 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP015867 Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence 232355-232378 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 513004-513027 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_LR134447 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence 237622-237645 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_LR134451 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence 145929-145952 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP052758 Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence 138726-138749 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP018784 Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence 185265-185288 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP038146 Streptomyces sp. S501 plasmid unnamed, complete sequence 269782-269805 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MK310226 Halobacterium virus ChaoS9, complete genome 32345-32368 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 KJ538722 Mycobacterium phage HH92, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 KT222940 Mycobacterium phage Kinbote, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MN062706 Mycobacterium phage Heathen, complete genome 31813-31836 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MK919482 Mycobacterium phage DeepSoil15, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MT657330 Mycobacterium phage Webster2, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MF919517 Mycobacterium phage LilHazelnut, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 EU203571 Mycobacterium phage Giles, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NC_042328 Mycobacterium virus HelDan, complete genome 32065-32088 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MF373840 Mycobacterium phage Fred313, complete genome 31757-31780 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MT818421 Mycobacterium phage Luke, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MT684594 Mycobacterium phage Hadrien, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 MT114159 Mycobacterium phage Ein37, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 KT246485 Mycobacterium phage OBUpride, complete genome 7742-7765 3 0.875
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 KT454972 Mycobacterium phage Evanesce, complete genome 7748-7771 3 0.875
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP032341 Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence 236356-236379 4 0.833
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP012916 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence 3692-3715 4 0.833
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP012916 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence 812262-812285 4 0.833
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP016354 Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence 30117-30140 4 0.833
NZ_CP050975_1 1.1|282621|24|NZ_CP050975|CRT 282621-282644 24 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 801967-801990 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP027859 Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence 565803-565826 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_AP021845 Azospira sp. I09 plasmid pAZI09, complete sequence 134016-134039 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP013436 Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence 23643-23666 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP021914 Sagittula sp. P11 plasmid unnamed1, complete sequence 200806-200829 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP045095 Streptomyces sp. GY16 plasmid unnamed1, complete sequence 51866-51889 4 0.833
NZ_CP050975_1 1.3|282708|24|NZ_CP050975|CRT 282708-282731 24 NZ_CP041605 Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence 66655-66678 4 0.833

1. spacer 1.2|282666|21|NZ_CP050975|CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 1, identity: 0.952

gccgcctacgccacggccgac	CRISPR spacer
gccgcctacgcaacggccgac	Protospacer
*********** *********

2. spacer 1.2|282666|21|NZ_CP050975|CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 1, identity: 0.952

gccgcctacgccacggccgac	CRISPR spacer
gccgcctacgcaacggccgac	Protospacer
*********** *********

3. spacer 1.2|282666|21|NZ_CP050975|CRT matches to CP016642 (Mycobacterium sp. djl-10 plasmid djl-10_2, complete sequence) position: , mismatch: 1, identity: 0.952

gccgcctacgccacggccgac	CRISPR spacer
gccgccgacgccacggccgac	Protospacer
****** **************

4. spacer 1.2|282666|21|NZ_CP050975|CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 1, identity: 0.952

gccgcctacgccacggccgac	CRISPR spacer
gccgcctacgcaacggccgac	Protospacer
*********** *********

5. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 2, identity: 0.917

acggccaccaccgtcgcggccacg	CRISPR spacer
acgtccaccaccgtcgcgtccacg	Protospacer
*** ************** *****

6. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP015742 (Shinella sp. HZN7 plasmid pShin-06, complete sequence) position: , mismatch: 2, identity: 0.917

acggccaccaccgtcgcggccacg	CRISPR spacer
acggccgccactgtcgcggccacg	Protospacer
******.****.************

7. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.917

acggtcaccgtctccgccgacgac	CRISPR spacer
acggtcaccgccgccgccgacgac	Protospacer
**********.* ***********

8. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NC_016588 (Azospirillum lipoferum 4B plasmid AZO_p6, complete sequence) position: , mismatch: 2, identity: 0.917

acggtcaccgtctccgccgacgac	CRISPR spacer
accgtcaccgtctccgccgacggc	Protospacer
** *******************.*

9. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_LR134452 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 10, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gaggccaccaccgtcgcggtcacg	Protospacer
. *****************.****

10. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
acggcaaccaccgtcgcggccaaa	Protospacer
***** **************** .

11. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NC_024970 (Streptomyces aureofaciens strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gcggccaccaccgtcgtggcgacg	Protospacer
.***************.*** ***

12. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP015523 (Sphingomonas sp. NIC1 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaacaccgtcgcgggcacg	Protospacer
 ****** *********** ****

13. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_KJ396772 (Streptomyces lavendulae subsp. lavendulae strain CCM3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gcggccaccaccgtcgtggcgacg	Protospacer
.***************.*** ***

14. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP009405 (Mycobacterium avium subsp. hominissuis strain OCU464 plasmid p78K, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
ccggccaccaccgtcgcggcgccg	Protospacer
 *******************  **

15. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP015738 (Shinella sp. HZN7 plasmid pShin-02, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
ccggccaccaccgccgcggcgacg	Protospacer
 ************.****** ***

16. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gcggccaccaccggcgccgccacg	Protospacer
.************ *** ******

17. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP044425 (Paracoccus pantotrophus strain DSM 2944 plasmid pPAN2, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gccgccaccaccgtcgcggccagg	Protospacer
.* ******************* *

18. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcacggcaacg	Protospacer
 **************.**** ***

19. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP020440 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcacggcaacg	Protospacer
 **************.**** ***

20. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcacggcaacg	Protospacer
 **************.**** ***

21. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP020441 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcacggcaacg	Protospacer
 **************.**** ***

22. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP020447 (Paracoccus yeei strain FDAARGOS_252 plasmid unnamed7, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcacggcaacg	Protospacer
 **************.**** ***

23. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP024986 (Streptomyces lavendulae subsp. lavendulae strain CCM 3239 plasmid pSA3239, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
gcggccaccaccgtcgtggcgacg	Protospacer
.***************.*** ***

24. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcgcccacgaccgtcgcggccacg	Protospacer
 ** **** ***************

25. spacer 1.1|282621|24|NZ_CP050975|CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
tcggccaccaccgtcaccgccacg	Protospacer
 **************.* ******

26. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
aagggcaccaccgtcgcggccacc	Protospacer
* ** ****************** 

27. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

acggccaccaccgtcgcggccacg	CRISPR spacer
acggccaccaccgacccggccacc	Protospacer
************* * ******* 

28. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP023408 (Streptomyces fungicidicus strain TXX3120 plasmid p1, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
ccggtgaccgtctgcgccgacgac	Protospacer
 **** ******* **********

29. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP042264 (Litoreibacter sp. LN3S51 plasmid unnamed3, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
accgtcaccgtcaccgccgacgat	Protospacer
** ********* **********.

30. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
gcggtcaccgtctcggtcgacgac	Protospacer
.************* *.*******

31. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP009112 (Rhodococcus opacus strain 1CP plasmid pR1CP1, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
gcggtcaccgcctccgccgacggc	Protospacer
.*********.***********.*

32. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP015867 (Streptomyces parvulus strain 2297 plasmid pSPA1, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
gcggtcaccgtcgccgccgccgac	Protospacer
.*********** ****** ****

33. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
gccgtcaccgtctccgccgacaac	Protospacer
.* ******************.**

34. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_LR134447 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 5, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
ccgggcaccgtctccgccgacgcc	Protospacer
 *** ***************** *

35. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_LR134451 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 9, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
ccggtcaccgtccccgcggacgac	Protospacer
 ***********.**** ******

36. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP052758 (Cellulosimicrobium sp. BI34T plasmid pCPRO01, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
gcgctcaccgtctccgccggcgac	Protospacer
.** ***************.****

37. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP018784 (Curtobacterium pusillum strain AA3 plasmid pCPAA3, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
accgtcaccgtctccgacgacgag	Protospacer
** ************* ****** 

38. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP038146 (Streptomyces sp. S501 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgtctgcgccgccgac	Protospacer
 ************ ***** ****

39. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MK310226 (Halobacterium virus ChaoS9, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
aacgtcaccgtctccgtcgacgac	Protospacer
*  *************.*******

40. spacer 1.3|282708|24|NZ_CP050975|CRT matches to KJ538722 (Mycobacterium phage HH92, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

41. spacer 1.3|282708|24|NZ_CP050975|CRT matches to KT222940 (Mycobacterium phage Kinbote, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

42. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MN062706 (Mycobacterium phage Heathen, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
acggtcaccgtccgcgccgacgag	Protospacer
************. ********* 

43. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MK919482 (Mycobacterium phage DeepSoil15, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

44. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MT657330 (Mycobacterium phage Webster2, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

45. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MF919517 (Mycobacterium phage LilHazelnut, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

46. spacer 1.3|282708|24|NZ_CP050975|CRT matches to EU203571 (Mycobacterium phage Giles, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

47. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NC_042328 (Mycobacterium virus HelDan, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
acggtcaccgtccgcgccgacgag	Protospacer
************. ********* 

48. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MF373840 (Mycobacterium phage Fred313, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
acggtcaccgtccgcgccgacgag	Protospacer
************. ********* 

49. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MT818421 (Mycobacterium phage Luke, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

50. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MT684594 (Mycobacterium phage Hadrien, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

51. spacer 1.3|282708|24|NZ_CP050975|CRT matches to MT114159 (Mycobacterium phage Ein37, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

52. spacer 1.3|282708|24|NZ_CP050975|CRT matches to KT246485 (Mycobacterium phage OBUpride, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

53. spacer 1.3|282708|24|NZ_CP050975|CRT matches to KT454972 (Mycobacterium phage Evanesce, complete genome) position: , mismatch: 3, identity: 0.875

acggtcaccgtctccgccgacgac	CRISPR spacer
tcggtcaccgcctccgccgccgac	Protospacer
 *********.******** ****

54. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 4, identity: 0.833

acggccaccaccgtcgcggccacg	CRISPR spacer
ggcgccaccaccgtcgcggccacc	Protospacer
.  ******************** 

55. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 4, identity: 0.833

acggccaccaccgtcgcggccacg	CRISPR spacer
ggcgccaccaccgtcgcggccacc	Protospacer
.  ******************** 

56. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 4, identity: 0.833

acggccaccaccgtcgcggccacg	CRISPR spacer
ggcgccaccaccgtcgcggccacc	Protospacer
.  ******************** 

57. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP016354 (Prauserella marina strain DSM 45268 plasmid pPmarDSM45268, complete sequence) position: , mismatch: 4, identity: 0.833

acggccaccaccgtcgcggccacg	CRISPR spacer
acggccaccaccgtcgcgccccac	Protospacer
****************** **   

58. spacer 1.1|282621|24|NZ_CP050975|CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.833

acggccaccaccgtcgcggccacg	CRISPR spacer
gcgggcaccaccgtcgcggccagc	Protospacer
.*** *****************  

59. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP027859 (Streptomyces clavuligerus strain ATCC 27064 plasmid pCLA1, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
ctcgtcaccctctccgccgacgac	Protospacer
 . ****** **************

60. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_AP021845 (Azospira sp. I09 plasmid pAZI09, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
cgggtcaccgtctccgccgaccgc	Protospacer
  ******************* .*

61. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP013436 (Burkholderia latens strain AU17928 isolate AU17928 plasmid pAU17928, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
caggtcaccctctccgccgacgaa	Protospacer
  ******* ************* 

62. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP021914 (Sagittula sp. P11 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
ctggtcaccgtccccgccgacgag	Protospacer
 .**********.********** 

63. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP045095 (Streptomyces sp. GY16 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
ccggtcaccgtgtccgccgacgcg	Protospacer
 ********** **********  

64. spacer 1.3|282708|24|NZ_CP050975|CRT matches to NZ_CP041605 (Streptomyces sp. S1D4-14 plasmid pS1D4-14.1, complete sequence) position: , mismatch: 4, identity: 0.833

acggtcaccgtctccgccgacgac	CRISPR spacer
ggcgtcaccgtcaccgccgacgac	Protospacer
.  ********* ***********

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1672 : 60093 45 Clostridium_botulinum_C_phage(33.33%) transposase,integrase NA
DBSCAN-SWA_2 8303952 : 8378500 57 Thermus_phage(16.67%) transposase NA
DBSCAN-SWA_3 8599229 : 8676279 58 Mycobacterium_phage(33.33%) transposase,integrase attL 8589646:8589661|attR 8632085:8632100
DBSCAN-SWA_4 8797962 : 8855223 35 Gordonia_phage(50.0%) transposase NA
DBSCAN-SWA_5 8975133 : 9105044 106 Mycobacterium_phage(23.08%) transposase,integrase attL 8963481:8963498|attR 9108256:9108273
DBSCAN-SWA_6 9389156 : 9429483 37 Planktothrix_phage(40.0%) protease,tail NA
DBSCAN-SWA_7 9546582 : 9611088 49 Burkholderia_phage(25.0%) protease,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage