CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP051205	Chitinophaga sp. 1310 chromosome, complete genome	8 crisprs	csa3,cas6,cas5,cas3,cas8b6,cas7,RT,DEDDh,PD-DExK,WYL	0	3	3	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051205_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_1

404656-404758

Orphan

Consensus_repeat	Method
CCTCAAATCAAAAAATCATAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_1

>merge|NZ_CP051205|1|404656-404758|CRISPRCasFinder
CCTCAAATCAAAAAATCATAAATACTTTATTTGGGGATTTTTTGATTTACGATTTAGGGATTTCGGGGATATATGGTTTCCCTCAAATCAAAAAATCGTAAAT

>NZ_CP051205|1|1|404656-404758|CRISPRCasFinder
CCTCAAATCAAAAAATCATAAAT	ACTTTATTTGGGGATTTTTTGATTTACGATTTAGGGATTTCGGGGATATATGGTTTC
CCTCAAATCAAAAAATCGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168802387.1\|400447_401017_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP051205.1\|WP_168802386.1\|400021_400426_+\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|240046
NZ_CP051205.1\|WP_168802388.1\|401074_401767_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP051205.1\|WP_168802400.1\|411827_412118_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226271
NZ_CP051205.1\|WP_168802397.1\|409465_410041_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379658
NZ_CP051205.1\|WP_168802390.1\|403021_403867_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP051205.1\|WP_168802393.1\|405844_407176_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376626
NZ_CP051205.1\|WP_168802384.1\|398885_399545_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP051205.1\|WP_168802395.1\|407949_408600_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168802394.1\|407431_407944_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP051205.1\|WP_168802383.1\|397231_398815_-\|oleate-hydratase	unknown	unknown	gnl\|CDD\|237575
NZ_CP051205.1\|WP_168802396.1\|408688_409465_+\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
NZ_CP051205.1\|WP_168802399.1\|410796_411732_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176856
NZ_CP051205.1\|WP_168802385.1\|399668_400025_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239315
NZ_CP051205.1\|WP_168802398.1\|410053_410659_-\|nucleosidase	unknown	unknown	gnl\|CDD\|180353
NZ_CP051205.1\|WP_168802382.1\|396303_397200_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|181359
NZ_CP051205.1\|WP_168802392.1\|404788_405766_-\|DUF1080-domain-containing-protein	unknown	unknown	gnl\|CDD\|368908
NZ_CP051205.1\|WP_168802401.1\|412409_413393_+\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|235456
NZ_CP051205.1\|WP_168802391.1\|403849_404599_-\|metallophosphoesterase-family-protein	unknown	unknown	gnl\|CDD\|378975
NZ_CP051205.1\|WP_168802389.1\|401768_402956_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340882

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168802387.1\|400447_401017_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	7.01261e-16
NZ_CP051205.1\|WP_168802386.1\|400021_400426_+\|NUDIX-domain-containing-protein	gnl\|CDD\|240046	cd04690, Nudix_Hydrolase_31, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	3.39798e-30
NZ_CP051205.1\|WP_168802388.1\|401074_401767_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.13355e-28
NZ_CP051205.1\|WP_168802400.1\|411827_412118_+\|hypothetical-protein	gnl\|CDD\|226271	COG3748, COG3748, Predicted membrane protein [Function unknown].	9.48857e-06
NZ_CP051205.1\|WP_168802397.1\|409465_410041_-\|thioredoxin-family-protein	gnl\|CDD\|379658	pfam14595, Thioredoxin_9, Thioredoxin.	5.78479e-48
NZ_CP051205.1\|WP_168802390.1\|403021_403867_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.81146e-19
NZ_CP051205.1\|WP_168802393.1\|405844_407176_-\|hypothetical-protein	gnl\|CDD\|376626	pfam01835, A2M_N, MG2 domain. This is the MG2 (macroglobulin) domain of alpha-2-macroglobulin.	0.000396094
NZ_CP051205.1\|WP_168802384.1\|398885_399545_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.53947e-08
NZ_CP051205.1\|WP_168802394.1\|407431_407944_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	2.93904e-26
NZ_CP051205.1\|WP_168802383.1\|397231_398815_-\|oleate-hydratase	gnl\|CDD\|237575	PRK13977, PRK13977, myosin-cross-reactive antigen; Provisional.	0
NZ_CP051205.1\|WP_168802396.1\|408688_409465_+\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	4.58108e-139
NZ_CP051205.1\|WP_168802399.1\|410796_411732_+\|hypothetical-protein	gnl\|CDD\|176856	cd07814, SRPBCC_CalC_Aha1-like, Putative hydrophobic ligand-binding SRPBCC domain of Micromonospora echinospora CalC, human Aha1, and related proteins. This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of Micromonospora echinospora CalC, human Aha1, and related proteins. Proteins in this group belong to the SRPBCC domain superfamily of proteins, which bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. MeCalC confers resistance to the enediyne, calicheamicin gamma 1 (CLM), by a self sacrificing mechanism which results in inactivation of both CalC and the highly reactive diradical enediyne species. MeCalC can also inactivate two other enediynes, shishijimicin and namenamicin. A crucial Gly of the MeCalC CLM resistance mechanism is not conserved in this subgroup. This family also includes the C-terminal, Bet v1-like domain of Aha1, one of several co-chaperones, which regulate the dimeric chaperone Hsp90. Aha1 promotes dimerization of the N-terminal domains of Hsp90, and stimulates its low intrinsic ATPase activity, and may regulate the dwell time of Hsp90 with client proteins. Aha1 can act as either a positive or negative regulator of chaperone-dependent activation, depending on the client protein, but the mechanisms by which these opposing functions are achieved are unclear. Aha1 is upregulated in a number of tumor lines co-incident with the activation of several signaling kinases.	8.40011e-17
NZ_CP051205.1\|WP_168802385.1\|399668_400025_+\|hypothetical-protein	gnl\|CDD\|239315	cd03017, PRX_BCP, Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), which functions as an alkyl-hydroperoxide reductase during post-diauxic growth.	7.9116e-14
NZ_CP051205.1\|WP_168802398.1\|410053_410659_-\|nucleosidase	gnl\|CDD\|180353	PRK06026, PRK06026, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Validated.	3.63224e-24
NZ_CP051205.1\|WP_168802382.1\|396303_397200_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|181359	PRK08293, PRK08293, 3-hydroxyacyl-CoA dehydrogenase.	2.88143e-170
NZ_CP051205.1\|WP_168802392.1\|404788_405766_-\|DUF1080-domain-containing-protein	gnl\|CDD\|368908	pfam06439, DUF1080, Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.	3.11977e-43
NZ_CP051205.1\|WP_168802401.1\|412409_413393_+\|aspartate--ammonia-ligase	gnl\|CDD\|235456	PRK05425, PRK05425, asparagine synthetase AsnA; Provisional.	8.28294e-171
NZ_CP051205.1\|WP_168802391.1\|403849_404599_-\|metallophosphoesterase-family-protein	gnl\|CDD\|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	1.1849e-17
NZ_CP051205.1\|WP_168802389.1\|401768_402956_-\|MFS-transporter	gnl\|CDD\|340882	cd17324, MFS_NepI_like, Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily. This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.03533e-58

>NZ_CP051205.1|WP_168802391.1|403849_404599_-|metallophosphoesterase-family-protein
MMKIAVISDIHGNLPALQAVLEDISRYGADQIYCLGDLTDAAPWHNEVIAQIRALRIPTIMGNHDERIAYDLPVKPLAKHGPEERAARITAIEYTRNTITADHKQFLRTLPSLLHLRFGQHRLLLAHGSPESNETYLYADHPEAALLDMMEKAHADVLIIGHTHVSYIRPIGYGQKLVINTGSAGRSKEADRRAAYLRLEIRDPHAGTLPELLRATIQKVAYDMELTTTGIRNSPVPDFYADFLSGALT
>NZ_CP051205.1|WP_168802390.1|403021_403867_+|AraC-family-transcriptional-regulator
MRLIQHDDLFIRHFQTREWPFELHNHNHFELIFIHHGSGTHQLNGETFRYEGPCYYALAPEDEHIFYIEEETKYTVLKFTNVYLGQQLQPAAIAQWEQRFQQLIVATRSHGVPVMAKEVLVRISSVMEVIAAEWQLQPVPSNEGVLHLIRGVLALLAGLPAEAEQGPQRSVALTQAMHYIHTHITNPAQLQQEMMAPALQMGKARLQVLFKQELGVSVRDYINEYKSRQIENKLRYSDMSIKEIAGQYGFGDLSHLNKFFRKMKGTNPRSYRTQLKSGKGA
>NZ_CP051205.1|WP_168802389.1|401768_402956_-|MFS-transporter
MKTTPYHPFTIPLMAISAGVTVANIYYNQPILNDISAATGATAGEAGRVSTLAQLGYGLGMFFILPLGDKLDRRKLITALTSLLFVSLLLLSIARSIQLICLLSFLVGIGSTPAQILLPMSATISTGDRGKTVGRVFAGILIGILGARVVAGVVSDLLGWRYVFAISALLVLTVTILLHRYLPVVPPKFRGSYPQLLLSTVKLIGEYSVLRQAALLGAFTFGTFCSFWTTLTFHLSAAPLHYSASRIGLFGLIAIGGALAAPAFGKLADKGQIYKSLLLTVSMIIVSVLLLKIFPHSVLMLSVSIFLLDVGVQATQITNFTRIYSLHEHAHSRLNTVYMTAYFIGAAIGTSCGVAAWQYGGWDMATWQLLLWSVIALGIVGWSANTQPRMMTAKR
>NZ_CP051205.1|WP_168802388.1|401074_401767_+|methyltransferase-domain-containing-protein
MSHTDPIRPLTRGIYTCLDNPARASYDCKAGYYERLVSTRWFNRFFWDTSRQDYQAFAADAILRSSGTVLDIGCGGLAQTAHLYRATGNDCILLDRSVEMLKIARARLSGGGRPLPAHIQLLQGDAFQLPFPDNTFDTVCSFGTIHLFDNKQAFVNEALRVLKPGGRYYFYSMTSQRKISRVFMSSLRLIHEFGEVYSVAQTVALFGQPSLQVKSYVIGSTVFIHGQKIK
>NZ_CP051205.1|WP_168802387.1|400447_401017_+|Crp/Fnr-family-transcriptional-regulator
MQRMYDFLRQQVNISEEDWRIFSACFEPKTYPAKTFYLQAGETENYLTFVDSGVVRFYVENGNGDETTVGFAFDGWFMCVYSSFYTREPSRYYGETITETRLWRIHHDDLQRMYDRLRIVDRIGRLATEQMLLIKSARELSLLTKTAEERYLDLLRLAPQLFRYVPLKHLASYIGITPQALSRIRKRIS
>NZ_CP051205.1|WP_168802386.1|400021_400426_+|NUDIX-domain-containing-protein
MNYIDCVGLIVVENRELLLAFSKNKGAWYLPGGKVDAGETPLQAMQREIKEELNMDLTADSLQWYYHITAPAFGEKDLLMRQDCFRHQLRQTPQPSAEIGAVRFFSLEAYRQEPHQVRGVLLAFEKLQQDGLVD
>NZ_CP051205.1|WP_168802385.1|399668_400025_+|hypothetical-protein
METDLTYLPPHLPVPEDDGACDHLSGIQIPAVQLPSTDGTKVSLRDIPGRLVIYCYPMTGPSHIPLPPGWDEIPGARGCTPQACSFRDHYQELQKYRRRAGISEGYYQVKLLLFTFAG
>NZ_CP051205.1|WP_168802384.1|398885_399545_-|GNAT-family-N-acetyltransferase
MTTDETYEQADPHVVETWLKGWSLARELPLPIADHGGLRVDVGWPDQQTRYVFPALGPGLFHFANTIVQPAVFLKICAPASLVRPVLPPRWVIQAPGFMMTRTLPAHPSRLPLPEGYTLTFDTANAGPIASIYASNGEVAASGRLAIVDDYIIYDRIATTPAHQRRGLGSAVMAALTTEAVSRDIRKGILVATPAGKALYETLGWKMYSLYTTAVIPHN
>NZ_CP051205.1|WP_168802383.1|397231_398815_-|oleate-hydratase
MHDSNKHAWFVGGGLASLAAAVYLIEDAGFKGENIHIIEALPVLGGSNDGAGAKQEGFVCRGGRMLNEETYENFWDLTSRIPSLEVPNISVKDEILAFDHANPTHAKARLIDKYGKILDVHSMGFDHDDRMKMLKLFFTDENELDHMTIREWFGDHFFTTNFWYMWQTTFAWQEWSSLFEFRRYMNRMILEFSRIDTLEGVTRTPYNQYESVILPIKKYLDKFGIDYSLKRTVTDLIFKDGDGITVTAIQYQDADGKTGSIALQEGDLCFFTNGCITDNSNNGDYKTPARYLPDNPPSFALWKKIALKKPRLGNPDPFFGKPDETKWYSFTATFRGNTMLKLIEAFSGNKPGSGALMTFRDSSWRMSIVVAAQPHFKAQGDDTTIFWGYGLYPDRTGDFVQKRMIDCTGEEILTELIHQLHFEQHENEIKESVVNVIPVMMPYIDALFQPHAKADRPPVVPKGSTNLAMISQFVEIPQDMVFTEEYSVRAARTAVYTLLNIDKEVAPVTPYNRRPDVLAKAVHTAYR
>NZ_CP051205.1|WP_168802382.1|396303_397200_-|3-hydroxyacyl-CoA-dehydrogenase
MNIKTVTVAGSGVLGAQIAFQTAVHQYQVHVYDISDAVLEKAKTTLQQLASAYQHDLGLEKADTDAAFSRIRYFTDLAAAVKGADLLIEAIPENPAIKTEFYQKLAAVADPQTIFATNSSTLLPSQFAAATGRPAQFLSLHFANEIWKHNTAEIMGHPGTDKATFDTVVAFAKSIGMVALPLHKEQPGYIVNSLLVPLLDAATTLLVRGVADVETIDKTWMVATGAPVGPFGILDVVGITTAYNITNMAAEKTKDPEKIKAAAFLKENFIEKNKLGTATGEGFYKYPNPSYRQPGFLK
>NZ_CP051205.1|WP_168802392.1|404788_405766_-|DUF1080-domain-containing-protein
MRRNILVLGMSGLLTLGAMAPAMASGRTQPGTTQAPTDAKALIGRWDITIDENGKPAPSWLEVKLSGFKTLVGYFVGTSGSARPVAKVNFDNGKFSFSIPPQWESGNQDFLIEGELTDAGIQGTITTSEGKKYNWKGVKAPYLKKTGAVAWGKPINLFNGKDLTGWKAAGKENQWIVKDGILTSPHSGANLVSEQKFTDFKLHAEFRYQKGSNSGIYLRGRHEVQIEDSNPDTHPSSVLFSGVYGFLAPSEINALGPDKWQTYDITLTGRMVTIVVNGKTVINNQEIPGITGGALDSNEGEPGPIYIQGDHGPIEFRKLVITPAK
>NZ_CP051205.1|WP_168802393.1|405844_407176_-|hypothetical-protein
MRKTALLLLTILLYTPHIVAQNRDINSTGLYIHTDKHIYTPAEKIWFTGYLLNIRATDTLPYHTLFVALINPNTRKPVLNERFAFDRGVAKGLLVLPDTLPPGDYALVGYTNNYIADNHEQEFQQWISVRKPHQPPFKTRKTPADTTRTATLKIPGSNICIRLDTDSTTYRQRGLVNCRLELTDTTGKPIQGLFSVACVCEKRLRKHDKWDISHYYFIDQYRLPASIDLSTAQQELNPVSGFVTKGSKKVKKPIPLLLMKNNEMITLKTNKDGIFCLNSYQLITPPGQPDAILSVVKGNQSEFKINFLNDIERVNHQLAKINYPYTPEEMTDSTIFMPEEMSAMAAAAQTPPAPGLPVPQQEPGYVKKVKPVYTPPEFQQASDTIATPNFNSTLYWNHLINTDEQGHANFTFRLNDLPGVFVCVVQGISTMGVFSKYLRFVVR
>NZ_CP051205.1|WP_168802394.1|407431_407944_+|RNA-polymerase-sigma-factor
MDAAISTDQFLSVMEAHKGIIYKVAGAWCRQEEDRKDLVQEIIIQLWKAFGHYNSGQAQYSTWVYRIALNVAISFYRRETRRKAATGTLETAVLEMVDTGPGKETDERLQWLQRFIHNLRELDRALILLYLEEKSHQEIADILGISVTNVATKIGRIKDLLRQQFSRIKT
>NZ_CP051205.1|WP_168802395.1|407949_408600_+|hypothetical-protein
MEDKDIIHLWKSYEKHLADNLLLNRKNAAEITGIKIHSFLASMRPVKYFALLAGILWVAFIDTLLVSMFYTASPFFLVSMGIQSLLTTIAIGIYLYQLLLIEQIDISGPVLDTQEKLSRLKSSTLWCARLLWLQLPVWTTFYLHAGMFVKENSWLLAAQGIVTAGFTIAAVWFFRNIRYENRGRSWFRWLFEGKEWTPVIRSMEMLEEIKVFREGR
>NZ_CP051205.1|WP_168802396.1|408688_409465_+|exodeoxyribonuclease-III
MKIATYNVNGINARLPVLLRWLKESAPDVACLQELKAPQEKFPESAIREAGYDVIWHGQKSWNGIAILSKVGKPQEIRRTLPGDEEDVHSRYMEAAINGVLIGCLYLPNGNPAPGPKFDYKLSWFKRLTDHAKELLAQKTPVILTGDYNVMPTDLDVYKPERWVDDALFRPEVKSAFHALVAQGWTDAIRKLYPDQKIYTFWDYFRNAYERDAGLRIDHFLLSPEVDKRLIAAGVDRHVRGWEKSSDHAPVWVELKGA
>NZ_CP051205.1|WP_168802397.1|409465_410041_-|thioredoxin-family-protein
MNFTDYLQLFENILQDADPKAPYNNPDYLNYTKLNWSRQQRWLKTGVITDAMAAAVKNITAPQQWVIITEPWCGDAAHIVPFLYKIAALNPLVTIDIQQRDTPPFLIEQYLTNGTKSIPKLVIRDSDGNDMAVWGPRPAGCQVLYNKLKEEKADFERMKIELQQWYNEDKGKSLQAELLEVLTQVQKVSLA
>NZ_CP051205.1|WP_168802398.1|410053_410659_-|nucleosidase
MIHGPSAQPQHITSLLNQRPLFVFALSSEAAEEFNEDNILIAGIGKVNAAFNLTKKIQEERPGLIVNLGSAGSCTFKRGEVVCCNRFIQRDMDVTGLGYRKYETPFSNLEPVLEYGIQLDGFPSGICGTGDNFETAHVAADYNVLDMEAYSLAMVAMKENIPFLCLKYITDGADGGAAEEWTEQVHHAAAAFRKIISGLQQ
>NZ_CP051205.1|WP_168802399.1|410796_411732_+|hypothetical-protein
MDPLQQFNDTLGQWVAFLDDYSLEMICRPTKAAAWSLGQVYQHIIDDTGWYVEQVAAALTANEHQHEPITEEGRKILAHGFPDVQIAGPATNTFIPQPESIDQLRQGLLSIQQSVAAVCRNVDIDSATGKTQHPGLGYFTAGEWLRFAVVHMQHHLRQKKRIDAQLFAGNTVNKSVFIQAPAATVWEMLTNPEKINLWMMDSPVHIQSGWKAGSPLVFTGDLHGIPYINKGVILAFEPEQLLSYTHWSSLSERPDEPEQYGIITFRLNAADTGTMLDFTQTNTGKYATDRHINYYWGTALALIKKRCEAAV
>NZ_CP051205.1|WP_168802400.1|411827_412118_+|hypothetical-protein
MKYLIILIALLCIAYAAPATPEDDKQKALLVLREKCNVCHVRNNPFRVFKEKNMERNAKDIYKQVFVKGRMPLGGEVKLTGEERETLKRWVEATIN
>NZ_CP051205.1|WP_168802401.1|412409_413393_+|aspartate--ammonia-ligase
MITLTAKTNDILHLEKGISLIKDYFPARLSQRLSLTKVSAPLFVQSGTGFNDDLNGVEKPVKFNLKNIPYPVEIVQSLAKWKRMRLYQLGLEPEQGIVTDMRAIRPDEVVSPVHSFYVDQWDWEKRILPEHRRISYLKDTVAQIYQAVLDTNAMLEEAHEKTLDLPSSVYFIDSETLLQRYPGLTPKERENRIAKEYGAVFIMGIGGLLSDQAVHDDRAPDYDDWSTANEEGFNGLNGDLILWNPVMNSALELSSMGIRVDAGSLREQLSLKDCGHRSELLFHSNVLNEVYPLSMGGGIGQSRLCMFLLQRKHISDVQSGIWPEGQL

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Crispr_ID: NZ_CP051205_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_2

617467-617554

Orphan

Consensus_repeat	Method
ACAGCTCCAATCAAAAAATTCACAAATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_2

>merge|NZ_CP051205|2|617467-617554|CRISPRCasFinder
ACAGCTCCAATCAAAAAATTCACAAATCAGAAAATCCGTAAATCTTTTTTGATCTCGTGACAGCTCCAATCAAAAAATTCACTAATCA

>NZ_CP051205|2|2|617467-617554|CRISPRCasFinder
ACAGCTCCAATCAAAAAATTCACAAATCA	GAAAATCCGTAAATCTTTTTTGATCTCGTG
ACAGCTCCAATCAAAAAATTCACTAATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168802546.1\|610871_611882_+\|class-1-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236458
NZ_CP051205.1\|WP_168802556.1\|624120_624519_+\|cytochrome-c-maturation-protein-CcmE	unknown	unknown	gnl\|CDD\|376989
NZ_CP051205.1\|WP_168802543.1\|606276_608715_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP051205.1\|WP_168802555.1\|622838_623882_-\|agmatinase-family-protein	unknown	unknown	gnl\|CDD\|212539
NZ_CP051205.1\|WP_168802545.1\|609459_610728_-\|aspartate-kinase	unknown	unknown	gnl\|CDD\|239776
NZ_CP051205.1\|WP_168811575.1\|612092_612536_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|349398
NZ_CP051205.1\|WP_168802557.1\|624627_627156_+\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|224061
NZ_CP051205.1\|WP_168802559.1\|628354_628984_+\|DUF4294-domain-containing-protein	unknown	unknown	gnl\|CDD\|379485
NZ_CP051205.1\|WP_168802553.1\|620846_622142_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|100105
NZ_CP051205.1\|WP_168802547.1\|612742_613507_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP051205.1\|WP_168811578.1\|618628_619852_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP051205.1\|WP_168802550.1\|615912_617361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168802551.1\|617588_618482_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|223880
NZ_CP051205.1\|WP_168802554.1\|622247_622835_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168811576.1\|614052_614613_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP051205.1\|WP_168802552.1\|619920_620850_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP051205.1\|WP_168802558.1\|627261_628263_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_CP051205.1\|WP_168802544.1\|608777_609056_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168802548.1\|613518_614046_+\|putative-metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|183954
NZ_CP051205.1\|WP_168802549.1\|614613_615903_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	unknown	unknown	gnl\|CDD\|273659

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168802546.1\|610871_611882_+\|class-1-fructose-bisphosphatase	gnl\|CDD\|236458	PRK09293, PRK09293, class 1 fructose-bisphosphatase.	5.24632e-157
NZ_CP051205.1\|WP_168802551.1\|617588_618482_-\|energy-transducer-TonB	gnl\|CDD\|223880	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane].	6.5767e-07
NZ_CP051205.1\|WP_168802555.1\|622838_623882_-\|agmatinase-family-protein	gnl\|CDD\|212539	cd11593, Agmatinase-like_2, Agmatinase and related proteins. This family includes known and predicted bacterial and archaeal agmatinase (agmatine ureohydrolase; AUH; SpeB; EC=3.5.3.11), a binuclear manganese metalloenzyme that belongs to the ureohydrolase superfamily. It is a key enzyme in the synthesis of polyamine putrescine; it catalyzes hydrolysis of agmatine to yield urea and putrescine, the precursor for biosynthesis of higher polyamines, spermidine, and spermine. As compared to E. coli where two paths to putrescine exist, via decarboxylation of an amino acid, ornithine or arginine, a single path is found in Bacillus subtilis, where polyamine synthesis starts with agmatine; the speE and speB encode spermidine synthase and agmatinase, respectively. The level of agmatinase synthesis is very low, allowing strict control on the synthesis of putrescine and therefore, of all polyamines, consistent with polyamine levels in the cell. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	3.3719e-99
NZ_CP051205.1\|WP_168802545.1\|609459_610728_-\|aspartate-kinase	gnl\|CDD\|239776	cd04243, AAK_AK-HSDH-like, AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-activated, threonine-sensitive enzyme whose ACT domains, located C-terminal to the AK catalytic domain, were shown to be involved in allosteric activation. Also included in this CD is the catalytic domain of the aspartokinase (AK) of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. In E. coli, LysC is reported to be a homodimer of 50 kD subunits. Also included in this CD is the catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.	9.08464e-99
NZ_CP051205.1\|WP_168811575.1\|612092_612536_+\|CAP-domain-containing-protein	gnl\|CDD\|349398	cd05379, CAP_bacterial, Bacterial CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain proteins. Little is known about bacterial and archaeal members of the CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain family. The wider family of CAP domain containing proteins includes plant pathogenesis-related protein 1 (PR-1), cysteine-rich secretory proteins (CRISPs), and allergen 5 from vespid venom, among others. Studies of eukaryotic proteins show that CAP domains have several functions, including the binding of cholesterol, lipids and heparan sulfate. This group includes Borrelia burgdorferi outer surface protein BB0689, which does not bind to cholesterol, lipids, or heparan sulfate, and whose function is unknown.	7.59587e-37
NZ_CP051205.1\|WP_168802557.1\|624627_627156_+\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|224061	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones].	9.88509e-70
NZ_CP051205.1\|WP_168802559.1\|628354_628984_+\|DUF4294-domain-containing-protein	gnl\|CDD\|379485	pfam14127, DUF4294, Domain of unknown function (DUF4294). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 192 and 226 amino acids in length.	5.50003e-62
NZ_CP051205.1\|WP_168802553.1\|620846_622142_-\|radical-SAM-protein	gnl\|CDD\|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	8.5519e-17
NZ_CP051205.1\|WP_168802547.1\|612742_613507_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.68271e-85
NZ_CP051205.1\|WP_168811578.1\|618628_619852_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	7.70142e-56
NZ_CP051205.1\|WP_168802543.1\|606276_608715_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	3.36857e-107
NZ_CP051205.1\|WP_168802556.1\|624120_624519_+\|cytochrome-c-maturation-protein-CcmE	gnl\|CDD\|376989	pfam03100, CcmE, CcmE. CcmE is the product of one of a cluster of Ccm genes that are necessary for cytochrome c biosynthesis in eubacteria. Expression of these proteins is induced when the organisms are grown under anaerobic conditions with nitrate or nitrite as the final electron acceptor.	1.1618e-14
NZ_CP051205.1\|WP_168802552.1\|619920_620850_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.48022e-23
NZ_CP051205.1\|WP_168802558.1\|627261_628263_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.32237e-13
NZ_CP051205.1\|WP_168811576.1\|614052_614613_+\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	1.57986e-43
NZ_CP051205.1\|WP_168802548.1\|613518_614046_+\|putative-metal-dependent-hydrolase	gnl\|CDD\|183954	PRK13291, PRK13291, putative metal-dependent hydrolase.	5.5023e-77
NZ_CP051205.1\|WP_168802549.1\|614613_615903_-\|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase	gnl\|CDD\|273659	TIGR01499, Folylpolyglutamate_synthase, folylpolyglutamate synthase/dihydrofolate synthase. This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid].	1.83265e-126

>NZ_CP051205.1|WP_168802550.1|615912_617361_-|hypothetical-protein
MRMHRILFSTVLFLWPAYAAVAQTFPGYNTSNYAGIHGVISNPASAAGYRYKWDVNIIGADVKGGNTYMKVPKSILFNPPPRNKWVRNQDYFLDTAANRRQNGWGMAEIVMPSVLYAIDEKQSVSFIWRVRASASGGNLPTPLANFFGNDYPNIQYRGKNLNIEKVGVGAHIWNELGFSYARTIHEGYTSRWKAGVTVKLLSGIAAGYAQVANASFVLNDRRNGDITSGTLRYAYSEELDHWQKPYTRNLQLFHNNGAGFDLGVIYEYRPDNGGFGQFEDTDADEYKFRLGLSLNDIGRIKYRKGANNTDLDLRKQDINPNEITYKDNESLKQYSTRLNRYFTPIPGDDSSFVMALPASLQLMGDYNIDGRFFVSANAIIALNAGKNGLARTYAMTQVLITPRYETELFGAYMPFVVNHNGQADVGAGFRIGPLVLGSYSLFTTLFQHRINHTDAFVALRINPGMLGKGNKNKGQLGCPVNF
>NZ_CP051205.1|WP_168802549.1|614613_615903_-|bifunctional-folylpolyglutamate-synthase/dihydrofolate-synthase
MNAYQEALDYLYGQLPMFTKVGASAYKTDLHNTVALLQQLNHPQHTFKTIHVAGTNGKGSTSHMLAAILQQAGYKTGLYTSPHLLDFRERIRINGQVAPEDFVVNFTNNMRPFIESISPSFFELTVAMAFQYFAQEKVDIAVIEVGLGGRLDSTNVITPELSVITNISFDHKNILGDTLPLIASEKAGIIKPGVPVVISETQSEIQWVFREKAAETGSPVHFADQEWMVDGSIIKDNHLELTLLDTRKGAMHHIRLDLSGQYQEKNVMGVLSAVKVLQQQGWHITWDHVLAALSHVRKLTGLRGRWEVVGEKPLTVMDVGHNEAGIREVVQQLEHVNYQQLHIVTGFVKDKEVDNVLPLFPATAIYYFCRAQIPRALDEVALAEMAARHGLQGRPYESVQAALQAARQHARPEDMILVCGSFFIVAEAM
>NZ_CP051205.1|WP_168811576.1|614052_614613_+|NUDIX-hydrolase
MMNMDWKLLSSEYLFKDDWLTARKDKCITPQGTIVEPYYVLEYNDWVNAVALTEDGQVIMIRQYRQGIGQTLLEIPGGTMDATDPSPEFAMERELLEETGYEFSELISLGKVAANTASSNNYTHMFLATGGRKVKEQQLDHNEEIEVVLMSVPEVQQLILDNKIVHSLHVTGLCYALMHMGRMEMK
>NZ_CP051205.1|WP_168802548.1|613518_614046_+|putative-metal-dependent-hydrolase
MEALQYPIGRFEPLPDYSPAMLREYINDIRDLPTLVEMAVQNLDAFQLQKPYRPGGWNITQVVHHLADSHINAITRMKMALTEEKPIIKPYDEAAWAELEDVKNTPINVSITLLHALHTRWANLMERLTPEQWERSFIHPEHGRRFNMKTVAANYAWHGKHHLGHIQGLKERMNW
>NZ_CP051205.1|WP_168802547.1|612742_613507_+|ABC-transporter-ATP-binding-protein
MEKNKIIEVRNLVKKYGEFTAVKGISFDVYEHEIFGLLGPNGAGKSTTLEIIETLREKTEGQVTVGGFDLDTAPNDIKKIIGVQLQSSGYYPGLNLVELIEMFGGLYNQPVQPIELLRLFNLEDKAKAKYKELSGGQKQRFSIATTLINKPRIIFLDEPTTGLDPQARRNLWDLILQVRAQGTTVVITTHYMDEAEFLCDRCAIVDSGQVIAIDSPDALIDNLVSKGFERSKEVKKANLEDVFIHLTGKDLRES
>NZ_CP051205.1|WP_168811575.1|612092_612536_+|CAP-domain-containing-protein
MFAAFQVSACSRATSRADSTATGGSLDEQILYYTNKFRQSKGLKPLQLDETISQQARRHSRDMANGSTGFGHEGFEDRVAYITKKMGRVGAAAENVAYGTLDAQAVVDGWIKSPGHRRNMLGDYNMIGIGTAGKGRITFFTQVFIKH
>NZ_CP051205.1|WP_168802546.1|610871_611882_+|class-1-fructose-bisphosphatase
MNHKQKVMTLDEFTIQELRNYPGATGQLSGLLRDIGLAAKRVNVEVNKAGIADILGEAGKTNVQGESVKKLDEFANEQFINSLRTSIYCCGVASEEEEHFIAFNDEHSKKSKYVVLLDPLDGSSNIDVNVSIGTIFSVYRRLSAEGEECNLEDFLQPGTQQIAAGYIIYGSSTMMVYATRRSVQGFTLDPSIGEFCLSHPNLKCPPESDIFSVNVGYYHLYEDKVRQSIDHFMARNENDRIYRHRFVGCMVAEIHRTLIQGGIFMYPAFGKYKSGRLRLCYECNPMSFLMEKAGGMSMANSRQRLLELKPVQLHQRVPIFIGSKNMMETWKDIMNK
>NZ_CP051205.1|WP_168802545.1|609459_610728_-|aspartate-kinase
MKVFKFGGASLESVERIKQVAQIVQSFPDDKLLIVISAMGKTTNELEKVAQNFYMRKREIAAQLLYNVEQQHIQVAESLLGNREHPLFQQLQQFFTEAEWTLGEKPLRAYDYYYDQLVSMGELLSTAIVSAFFNTIGLSNTWVDVRDVFRTDDNFRDANIDWAFTQKQVTEKVVPLFNQTNIVIAQGFIGSTDQNESVTLGREGSDYSAAVFANMLDAESQTIWKDVEGLKNADPKLFPNTVNIPEISYGEVIEMAYYGAQVIHPKTIKPLQNKQIPLLVKCFLDKNLPGTVIREQADVRQLPPIIVLKRNQVLLTLTSKDYAFITEDKISDIYETFHRLKVKINLMQNGAITFSCCIDHNPEKIELLIKALHNDFKISYNEALELLTVRYYQDGLLEDLSNHHTVLLEQRSKVTVQRLLKK
>NZ_CP051205.1|WP_168802544.1|608777_609056_-|hypothetical-protein
MKKAALLLIVTSCIALVLASKGLLKDMAPMQSSSPDILPLFVITDANWPGALPTRQADADVNPDNAQLRPKPIQDAVKTIVDIYHSQNQIRQ
>NZ_CP051205.1|WP_168802543.1|606276_608715_-|TonB-dependent-receptor
MKKFIIVLGILMSAVMYAFAQKNPTGTISFKITDAAGKPLPFASVLLRKTQDSAQVKGEMSSESGEGRFEKIAFGQYFLQVSQMGFTTQYAANFTIDASHTNIAVPAIALQPLSKSLQTVNVTATRPFIEKSAGKTVLNVESSVTAVGNSALDILKRAPGVQIDNNENVKMKGQTVTVMIDGKLTYLSGEDLTNLLKNTPGESISQIEILTSPSAKYDASGNGGIINIKTKKGKLTGINGTVNATLSQSRYGTYSANGTFNWRTTKFNLFGDLGRTDRPFQITRKYSRAFNDKGVVTEQTQDIFQRNRFQRNAAKIGFDYFLNDKHTVGFIVNGFKNRFSNQIYSNTYFMNKPGAPADSLVNSYTTNNNRFNNIAINLNYKAVLDTAGREYSVDADYARFNSERALVLNDSMLDVKSQRVRNPNGIRNQGGTQITIKSLKGDFAWPLGKNGKVEAGVKASLVTTANRLAYDSLKNGEYIFAPSQSNEFKYQEDVYAAYASYKKQLTPKTGIQAGLRVENTQSDGYSVTLKSQVKRHYTDFFPNLTIDQKLNDNNKISLAYSRRIERPEYGQLNPFMFYLDRYTFFRGNPYLQPQYTNNVELAYTFKDKYIATLGYNRTTDVINEFLYQDDSAKTSTSTLMNYKKSHVYSLAVTLPFQVTKWWMSDNNLNAAYNDYYFTNNKNQPEMTSSFTYSFNSTNTITLPKDFKLEVAGYYNSPFVYAIFKGYNEYNLNLGIQKTFWDKKATIKFNYNNILRNESYRGIAQYSNLALHIFNTWQFRTASIYFSYRFGNSSIKAARERKTGTSDEQKRAG
>NZ_CP051205.1|WP_168802551.1|617588_618482_-|energy-transducer-TonB
MEENNRKKNIQALGVTIGVHALLLVALVFAGFSAPPPLPDQDLGMEVNLGTSDDGMGDEQPLNPNPPSAAASTPAPAESEPAATEKDNSAPQEVATQEDEEAPEIKKPEKPVEKPKELPKKLEPKPVAKPVKKPAAEPKPTPPAPKPQPKAVYSGGSSTNANSGNGAQGSNNSTGEGNTGKPGDRGQLNGDPNAKGYTGGGLGGGRSDFRLNGRNLISRPSVTYDGTESGYIAVNIKVDQKGNVIAATFSMKGSTLSNPQLIDIARKAALNGQLKYNANPDAPEVQFGTIRFYFKAE
>NZ_CP051205.1|WP_168811578.1|618628_619852_+|MFS-transporter
MLKQTIRLYQNAYTGLSAATWWLSLVLLINRSGAMVVPFLTVYLTAHLHFSIAQAGLVMACFGTGAIVGALLGGWLSDRIGFYQVQFWSLLFNGVLLILLGQMRTFPQICICVFVLSSVGDAFRPANSIAIAAYSAPQNRTRSYSLNRLAVNLGWSVGPALGGFLASISYQWLFWVDGGTCIVAALLMRIFLPPVPAPAKPEKAVATGQTENVWKDSLYLWFLLFGMINAICLFQFSSMVPLYFKEVVQMKEWAIGLNMSLNGLLIVMVEMVMIHHLDGKLPNLVYVSRGAMMVCLAYVLLCVLPPVWGIAAVFMIVVTFGEMLCLPFMNSFWISRSQDHNRGQYAALYTISYSLATVVSPTSGAFVVQHLGFTSWWAITAGGCVLSAAGFRWLQQKRARAEKVLAA
>NZ_CP051205.1|WP_168802552.1|619920_620850_+|AraC-family-transcriptional-regulator
MKVIQFTVPVAEEGSVVIQEDILPYFYNYLHRHKEAQLTLIIKGEGTLIAGSYTQPFKAGDIYVIGANQPHMFKGDARYFENLKEKNIHAIHIFFDHDNALKGMLALPELESVRKFLQQTRSSLQLPPAYEEKTAAEIMRLCKLTGAERLFAFMSLLTYFSRQVKDWKSLSTGFLRHAYSESEGLRMNDIYQYTLEHYAENISLARIASVAHLTTYAFCKYFKKHTRKTYLEFLNEIRINAACKKIINGDAESIASVAYATGYNNPITFNRVFRKVTGMSPSAYARQYRFGQENAQRSGFISEWEEVAL
>NZ_CP051205.1|WP_168802553.1|620846_622142_-|radical-SAM-protein
MLKQTPYILYSDGKGNIFEDTSMQVVGRSGWDAFPIDPEEWIELPEGGNLYELPGRRGIGIDVASGEMGLCDKGWAVAAFIPPAHTGFYLAAYETMPDAPTLPLFCYTAVGWLDGKFYVPATRIEADIRQECAGFDAKKVKQGVKQLMDAYPHNRLVKHLAENCALTYECPAARNYFMGRWECPIPSSPACNANCVGCISFQPEDETIVSTQDRLRFKPTAEEIVEYTVPHLETAPFPIVSFGQGCEGEPLLMWETIRESILEIRKHTPKGSININTNGSKPDAVRALCEAGLNSIRVSLNSAQEKYYTPYYRPNNYKFEDIIESLKVVREFNGWTSINYFVFPGMTDTEEEYEALRTLIRETGLNMIQWRNFNIDPDWYLGKLGITEPGPCMGIKQLQEMIHEEFPDVKFGYFNPPIERIKGDYMADFAH
>NZ_CP051205.1|WP_168802554.1|622247_622835_-|hypothetical-protein
MYSLRILHPNTASRLRLLPVMHGLVGILFLFDAIGIYKGPQPNWLLVGFFMVVGLVSLAFPFVVKRTRKFSEINSIARLIQAFICISGSLYFLGHQQPVTGLLMFAVGVGMAYIGWMEYKIFQPVHVKMDNTGIVLPTTFSERRIGWNELNNVILRNDLFTMDFKSNKIIQLEVLDEPGQEQREKMNGFFRERLG
>NZ_CP051205.1|WP_168802555.1|622838_623882_-|agmatinase-family-protein
MADLSQFDPNSVGLLSNNIFGLPFSEEEARLVLLPVPWEVTVSYSNGTARGPEHIFRASFQVDLYDADVKDGWKQGFFMREPDKHLLLRSDYLRKEAELYLKFLTEGGDISENEFLKKTLVDVNNGTRAMNEWVYNQTKQLLEKGKLVALIGGDHSTPLGFFKAIGEQKGDFGILQIDAHCDLRDAYEGFQYSHASIMYNALAEVPQLTKLVQVGIRDYCEEEVDYINNSNGRVVTFFDKNIKERQFEGETWKAICDSIIETLPQQVYISFDIDGLDPKLCPHTGTPVAGGFEAEQIYYLFKRLIASGRQLIGFDLNEVSASHDDWDANVGARVLFKLCNLLVSANS
>NZ_CP051205.1|WP_168802556.1|624120_624519_+|cytochrome-c-maturation-protein-CcmE
MKKTNIILLVVIAVAIGVIVTMVGDFSTYETFATAREKEGKEFHVIGKLDTLQAMQYDPLKDANLFSFYVHDKSGETRKVVFYGAKPTDFEKAESVVLTGKMQGNEFHCSKILMKCPSKYKDDQVVVGNKQL
>NZ_CP051205.1|WP_168802557.1|624627_627156_+|cytochrome-c-biogenesis-protein-CcsA
MKFEGEHLLPGQLGHFFAILAFVASLVATISYYNAVKVKEPLVRDSWKKLARWSFVIQSASVIAVFSCLFFILNNHYFEYKYAWRNTSRDLPTQYLFSSLWSDQEGSFLLWSIWNSVLGIILIRTSKNLEAPVMTVFSLAQVIFASMLLGIFILGYKVGSNPFMLLRQAPENQAAPIFQQADYMQHIHDGNGLNVTLQNYWMVIHPPILFLGFASMIIPFAFAFAGLWTRDYTGWVKPVLPWTLFAVALLGTGIMMGAAWAYESLNFGGYWGWDPVENASLVPWLTMVAGLHTLLAYKHTGHALKSTVFFFFISYVLILYSSFLTKSGVLGDTSVHSFTDMGMTAQLLFTIFVFTVPSIFLLIARRKEIPGNNKEESTYSREFWLFVGSLILLIAAIQITFTTSIPVWNQLLAFTGLKGLFKMDDIAPPSDVMFHYNKIQIWIAIVLGVLTAVVQFLKYKDTPKGFFTRKIWLPTALAVLFTALIAWKGPITYDNYGAGFLTAIYIMLFTSIYAIVGNFTYIFSGLKGKLKNAGASVAHIGFGMVLLGALISSSKMEVISIDRMKMLNDGFFRKESKQNPRENIMLPKDVQVQMGDYHVTYVGDSTAQGDPKTYYVMHYERKDKTTGEVKERFTLYPDAFVNRKENALSSNPASKHYLTRDIFTYVSAAPNKAEAATADTTAYTAHEVKVGDSIFFSKGFMVLKGLEPAPKNKNYIAEPNDLAVGAKLEVHTQTDDHFNLQPIYFIRDSSYQYSVEDTLAPLNLNVRFTKIMPAENKIELKVKEAAGFSDYVVMKALVFPYINVLWLGVIITIVGTGMSIVQRTRRTEKNAKAGTKKTPVNI
>NZ_CP051205.1|WP_168802558.1|627261_628263_+|alpha/beta-fold-hydrolase
MKRSLCIFLVLIAVLAVVFLVGPHPASPVYSLTLPVVPSDGRALERYVHDREARHRLKPDNEARIIWADSLAQPTPYAVVYLHGFSASQEEGDPIHHDFARRYGCNLYLSRLDGHGIDTTEPLLTMTADGLWEDAKEALQIGKALGRKVILIGTSTGGTLALKLAATYPQDVYAVINMSPNIAINDDLAFLANDPWGLQLARLVKGGKYKESSDTNAVRAQYWNNKYRLEAVVQLQNLLETSMTPATFGKIKQPVLNLYYYKDELHQDPTVRVSAILKMEQELGTPGNLKAAVPIPGAGAHVMGSRLTGHDLPAVANAINQFADSVLRLKPVR
>NZ_CP051205.1|WP_168802559.1|628354_628984_+|DUF4294-domain-containing-protein
MHCRRKIILSAILITGISLCRQEASAQSQAPHGVDTVALHAVVVGNDTIPVITLAIFDVVDKMPRALRKEKERYNRLRNAVYVTYPYARTAARLLKDVNSRLSAMSSKKERKAFLASKEKEMKEQFGDKLQNLSVYQGKVLMKLIDRETGQNCYEIIKELKGGFNARVWQTVAFFFGGNLKSDYDKQEDRDIEVIVQELEMYQRYRAYN

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Crispr_ID: NZ_CP051205_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_3

1532707-1533790

Unclear

NA:I-A,II-B,III-A

Consensus_repeat	Method
GTTTTAATTGGACTATG	PILER-CR
GTTTTAATTGGACTATGGCGGAATTGAAACG	CRISPRCasFinder
GTTTTAATTGGACTATGNNGNANTTGAAAC	CRT
TTGTTTTAATTGGACTATGGCGGAATTGAAAC	PILER-CR

16 spacers

cas7,cas8b6,cas3,cas5,cas6

The CRISPR arrays of NZ_CP051205_3

>merge|NZ_CP051205|3|1532707-1533790|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTTAATTGGACTATGGCGGAATTGAAACGAAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGTGTTTTAATTGGACTATGGCGGAATTGAAACGCTTTCAGCATTACGGAAAGGTCTTCGGCGATACCCGTTTTAATTGGACTATGGCGGAATTGAAACGGAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATGGTTTTAATTGGACTATGGCGGAATTGAAACCCGATAACCTTAAAGCTCTCGATGATGGCGTTGAACGTTTTAATTGGACTATGAGGAATTGAAACAAACGCATTCACAAGCCGGCGGATTTGGCCAAACAGGTTTTAATTGGACTATGAGGAATTGAAACAGCAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGTGTTTTAATTGGACTATGGCGGAATTGAAACTCCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAATTTTTAATCGGACTATGGTGGAATTGAAACGTAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTGGCTTTAATTGGACTATGGCGGAATTGAAACTTTGCTAGTTTACAGATCGTTAAAACCTCGATGTCTTGTTTTAATTGGACTATGAGGGAATTGAAACACGGTAACCTGTAAAAGATCTTCATGCCCGCTTAGTTGTTTTAATTGGACTATGGCGGAATTGAAACATGGTACATTCACCTTGGAAAACAGCCGCGGATATTGTTTTAATTGGACTATGGCGGAATTGAAACTTATACCAGCTGACTACATTATCCCACTTCATCGGGTTTTAATTGGACTATTAGGAATTTGAAACCGTAGAACATGTTCACGTAGCCCGAACCCGGCTAAGTTTTAATTGGAGTATGAGGAATTGAAACATTAGTAGAGCCCTGCGGAATTTAAAGAGATAACCGTTTTAATTGGACTATGAAGGAATTGAAACCGATATGATGTTGTGGGCAACACATATTTTGAAGTTAGTTTTAATTGGACTACGTGGAATGGAAAGAACTCTTTCAGATACCCAAATTCACCGGCTTGCGCAGTTTTAATTGGACTAAGAGGAATGGAGATC

>NZ_CP051205|3|1|1532707-1533052|PILER-CR
GTTTTAATTGGACTATG	GCGGAATTGAAACGAAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGT
GTTTTAATTGGACTATG	GCGGAATTGAAACGCTTTCAGCATTACGGAAAGGTCTTCGGCGATACCC
GTTTTAATTGGACTATG	GCGGAATTGAAACGGAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATG
GTTTTAATTGGACTATG	GCGGAATTGAAACCCGATAACCTTAAAGCTCTCGATGATGGCGTTGAAC
GTTTTAATTGGACTATG	AGGAATTGAAACAAACGCATTCACAAGCCGGCGGATTTGGCCAAACAG
GTTTTAATTGGACTATGAGGAATTGAAACAGCAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGTGTTTTAATTGGACTATGGCGGAATTGAAACTCCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAATTTTTAATCGGACTATGGTGGAATTGAAACGTAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTGGCTTTAATTGGACTATGGCGGAATTGAAACTTTG	CTAGTTTACAGATCGTTAAAACCTCGATGTCTTGT
TTTAATTGGACTATGAGGGAATTGAAACACGG	TAACCTGTAAAAGATCTTCATGCCCGCTTAGTTGT
TTTAATTGGACTATGGCGGAATTGAAACATGG	TACATTCACCTTGGAAAACAGCCGCGGATATTGT


>NZ_CP051205|3|3|1532707-1533659|CRISPRCasFinder
GTTTTAATTGGACTATGGCGGAATTGAAACG	AAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGT
GTTTTAATTGGACTATGGCGGAATTGAAACG	CTTTCAGCATTACGGAAAGGTCTTCGGCGATACCC
GTTTTAATTGGACTATGGCGGAATTGAAACG	GAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATG
GTTTTAATTGGACTATGGCGGAATTGAAACC	CGATAACCTTAAAGCTCTCGATGATGGCGTTGAAC
GTTTTAATTGGACTATGAGGAATTGAAACAA	ACGCATTCACAAGCCGGCGGATTTGGCCAAACAG
GTTTTAATTGGACTATGAGGAATTGAAACAG	CAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGT
GTTTTAATTGGACTATGGCGGAATTGAAACT	CCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAA
TTTTTAATCGGACTATGGTGGAATTGAAACG	TAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTG
GCTTTAATTGGACTATGGCGGAATTGAAACT	TTGCTAGTTTACAGATCGTTAAAACCTCGATGTCTT
GTTTTAATTGGACTATGAGGGAATTGAAACA	CGGTAACCTGTAAAAGATCTTCATGCCCGCTTAGTT
GTTTTAATTGGACTATGGCGGAATTGAAACA	TGGTACATTCACCTTGGAAAACAGCCGCGGATATT
GTTTTAATTGGACTATGGCGGAATTGAAACT	TATACCAGCTGACTACATTATCCCACTTCATCGG
GTTTTAATTGGACTATTAGGAATTTGAAACC	GTAGAACATGTTCACGTAGCCCGAACCCGGCTAA
GTTTTAATTGGAGTATGAGGAATTGAAACAT	TAGTAGAGCCCTGCGGAATTTAAAGAGATAACC
GTTTTAATTGGACTATGAAGGAATTGAAACC

>NZ_CP051205|3|1|1532707-1533790|CRT
GTTTTAATTGGACTATGGCGGAATTGAAAC	GAAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGT
GTTTTAATTGGACTATGGCGGAATTGAAAC	GCTTTCAGCATTACGGAAAGGTCTTCGGCGATACCC
GTTTTAATTGGACTATGGCGGAATTGAAAC	GGAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATG
GTTTTAATTGGACTATGGCGGAATTGAAAC	CCGATAACCTTAAAGCTCTCGATGATGGCGTTGAAC
GTTTTAATTGGACTATGAGGAATTGAAACA	AACGCATTCACAAGCCGGCGGATTTGGCCAAACAG
GTTTTAATTGGACTATGAGGAATTGAAACA	GCAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGT
GTTTTAATTGGACTATGGCGGAATTGAAAC	TCCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAA
TTTTTAATCGGACTATGGTGGAATTGAAAC	GTAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTG
GCTTTAATTGGACTATGGCGGAATTGAAAC	TTTGCTAGTTTACAGATCGTTAAAACCTCGATGTCTT
GTTTTAATTGGACTATGAGGGAATTGAAAC	ACGGTAACCTGTAAAAGATCTTCATGCCCGCTTAGTT
GTTTTAATTGGACTATGGCGGAATTGAAAC	ATGGTACATTCACCTTGGAAAACAGCCGCGGATATT
GTTTTAATTGGACTATGGCGGAATTGAAAC	TTATACCAGCTGACTACATTATCCCACTTCATCGG
GTTTTAATTGGACTATTAGGAATTTGAAAC	CGTAGAACATGTTCACGTAGCCCGAACCCGGCTAA
GTTTTAATTGGAGTATGAGGAATTGAAACA	TTAGTAGAGCCCTGCGGAATTTAAAGAGATAACC
GTTTTAATTGGACTATGAAGGAATTGAAAC	CGATATGATGTTGTGGGCAACACATATTTTGAAGTTA
GTTTTAATTGGACTACGTGGAATGGAAAGA	ACTCTTTCAGATACCCAAATTCACCGGCTTGCGCA
GTTTTAATTGGACTAAGAGGAATGGAGATC

>NZ_CP051205|3|2|1533237-1533464|PILER-CR
	GCGGAATTGAAACGAAGCTGTAGAGGCTATTGCATCCGCCGGTGAGGGT
GTTTTAATTGGACTATG	GCGGAATTGAAACGCTTTCAGCATTACGGAAAGGTCTTCGGCGATACCC
GTTTTAATTGGACTATG	GCGGAATTGAAACGGAACCAGCTCCAGGGACAGCTTGCCGTAGGAAATG
GTTTTAATTGGACTATG	GCGGAATTGAAACCCGATAACCTTAAAGCTCTCGATGATGGCGTTGAAC
GTTTTAATTGGACTATG	AGGAATTGAAACAAACGCATTCACAAGCCGGCGGATTTGGCCAAACAG
GTTTTAATTGGACTATGAGGAATTGAAACAGCAGTCGTTCTTCATACTCTGCTCTTCCTGGAAGGTGTTTTAATTGGACTATGGCGGAATTGAAACTCCTTAACGCTGTACCTTGTGTACGTGGCAGACGGAAATTTTTAATCGGACTATGGTGGAATTGAAACGTAGAAAACATGCCCGCAGTGCTGCGCTGGTTTTGGCTTTAATTGGACTATGGCGGAATTGAAACTTTG	CTAGTTTACAGATCGTTAAAACCTCGATGTCTTGT
TTTAATTGGACTATGAGGGAATTGAAACACGG	TAACCTGTAAAAGATCTTCATGCCCGCTTAGTTGT
TTTAATTGGACTATGGCGGAATTGAAACATGG	TACATTCACCTTGGAAAACAGCCGCGGATATTGT
TTTAATTGGACTATGGCGGAATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168803231.1\|1528102_1530220_+\|CRISPR-associated-helicase-Cas3'	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273707
NZ_CP051205.1\|WP_168803228.1\|1525112_1526078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168803235.1\|1536411_1536792_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915
NZ_CP051205.1\|WP_168803242.1\|1546246_1547053_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236438
NZ_CP051205.1\|WP_168803241.1\|1545515_1546118_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274376
NZ_CP051205.1\|WP_168803239.1\|1540396_1543918_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP051205.1\|WP_168803229.1\|1526860_1527526_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_CP051205.1\|WP_168803227.1\|1523893_1525063_+\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|235167
NZ_CP051205.1\|WP_168803237.1\|1537996_1538905_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168803240.1\|1544246_1545416_-\|FecR-family-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP051205.1\|WP_168803234.1\|1534693_1536337_-\|DNA-alkylation-response-protein	unknown	unknown	gnl\|CDD\|173843
NZ_CP051205.1\|WP_168803243.1\|1547060_1547804_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP051205.1\|WP_168803233.1\|1531509_1532568_+\|CRISPR-associated-protein-Cas7	cas7	mkCas0088_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP051205.1\|WP_168803226.1\|1522844_1523723_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP051205.1\|WP_168803236.1\|1536836_1537958_-\|AhpC/TSA-family-protein	unknown	unknown	gnl\|CDD\|239264
NZ_CP051205.1\|WP_168803224.1\|1521328_1521715_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374446
NZ_CP051205.1\|WP_168803230.1\|1527534_1528113_+\|hypothetical-protein	cas5	mkCas0069_cas5_CAS-I-B	unknown
NZ_CP051205.1\|WP_168803232.1\|1530222_1531503_+\|hypothetical-protein	cas8b6	mkCas0111_cas8b6_CAS-I-B	unknown
NZ_CP051205.1\|WP_168803225.1\|1521711_1522779_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_CP051205.1\|WP_168803238.1\|1538930_1540382_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	unknown	unknown	gnl\|CDD\|185760

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168803231.1\|1528102_1530220_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	9.81195e-48
NZ_CP051205.1\|WP_168803235.1\|1536411_1536792_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	2.31563e-12
NZ_CP051205.1\|WP_168803242.1\|1546246_1547053_+\|hypothetical-protein	gnl\|CDD\|236438	PRK09266, PRK09266, hypothetical protein; Provisional.	3.57848e-70
NZ_CP051205.1\|WP_168803241.1\|1545515_1546118_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274376	TIGR02985, Sig70_bacteroi1, RNA polymerase sigma-70 factor, Bacteroides expansion family 1. This group of sigma factors are members of the sigma-70 family (TIGR02937) and are found primarily in the genus Bacteroides. This family appears to have resulted from a lineage-specific expansion as B. thetaiotaomicron VPI-5482, Bacteroides forsythus ATCC 43037, Bacteroides fragilis YCH46 and Bacteroides fragilis NCTC 9343 contain 25, 12, 24 and 23 members, respectively. There are currentlyonly two known members of this family outside of the Bacteroides, in Rhodopseudomonas and Bradyrhizobium.	3.26629e-33
NZ_CP051205.1\|WP_168803239.1\|1540396_1543918_-\|SusC/RagA-family-TonB-linked-outer-membrane-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	0
NZ_CP051205.1\|WP_168803229.1\|1526860_1527526_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	1.23043e-12
NZ_CP051205.1\|WP_168803224.1\|1521328_1521715_+\|hypothetical-protein	gnl\|CDD\|374446	pfam16231, DUF4890, Domain of unknown function (DUF4890). This family consists of uncharacterized proteins around 200 residues in length and is mainly found in various Bacteroides species. The function of this family is unknown.	0.00105085
NZ_CP051205.1\|WP_168803234.1\|1534693_1536337_-\|DNA-alkylation-response-protein	gnl\|CDD\|173843	cd01154, AidB, Proteins involved in DNA damage response, similar to the AidB gene product. AidB is one of several genes involved in the SOS adaptive response to DNA alkylation damage, whose expression is activated by the Ada protein. Its function has not been entirely elucidated; however, it is similar in sequence and function to acyl-CoA dehydrogenases. It has been proposed that aidB directly destroys DNA alkylating agents such as nitrosoguanidines (nitrosated amides) or their reaction intermediates.	4.13206e-158
NZ_CP051205.1\|WP_168803233.1\|1531509_1532568_+\|CRISPR-associated-protein-Cas7	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.78701e-08
NZ_CP051205.1\|WP_168803226.1\|1522844_1523723_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.98895e-22
NZ_CP051205.1\|WP_168803236.1\|1536836_1537958_-\|AhpC/TSA-family-protein	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.48901e-35
NZ_CP051205.1\|WP_168803227.1\|1523893_1525063_+\|acyltransferase-family-protein	gnl\|CDD\|235167	PRK03854, opgC, glucans biosynthesis protein MdoC.	1.91717e-10
NZ_CP051205.1\|WP_168803243.1\|1547060_1547804_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.62974e-27
NZ_CP051205.1\|WP_168803238.1\|1538930_1540382_-\|RagB/SusD-family-nutrient-uptake-outer-membrane-protein	gnl\|CDD\|185760	cd08977, SusD, starch binding outer membrane protein SusD. SusD-like proteins from Bacteroidetes, members of the human distal gut microbiota, are part of the starch utilization system (Sus). Sus is one of the large clusters of glycosyl hydrolases, called polysaccharide utilization loci (PULs), which play an important role in polysaccharide recognition and uptake, and it is needed for growth on amylose, amylopectin, pullulan, and maltooligosaccharides. SusD, together with SusC, a predicted beta-barrel porin, forms the minimum outer-membrane starch-binding complex. The adult human distal gut microbiota is essential for digestion of a large variety of dietary polysaccharides, for which humans lack the necessary glycosyl hydrolases.	5.04733e-33
NZ_CP051205.1\|WP_168803225.1\|1521711_1522779_+\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.21685e-05
NZ_CP051205.1\|WP_168803240.1\|1544246_1545416_-\|FecR-family-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.65164e-19

>NZ_CP051205.1|WP_168803233.1|1531509_1532568_+|CRISPR-associated-protein-Cas7
MHTPFIYLRGLRHVSHSVFAVNEGQKYYYDPQTRKRMAYSSGQQIKRSILEGLNMPFAAITFNWEIDKEKKKANQKEPHSPCDPTYADQLLGGYMKAGANIMAVKRRSPLSISSMRPLNPLLGGIASPTENISFDRTSHTGSHKVKVHWTAGKERGPELSEEELDEWLTSNMRTLPNRAFIQDQTRASGLFVYDMAIDLRTLFCVSTNKYEPELYPEIEAKLRDEGWKEGKNIFGNCLVCPKERREEIIPALAKAIINWRITTNQSRTFDPMGIVAIVISDNANQITYAIRGDLRDDMEKRLATPVIDLSAKADFFVTPTAGSYVPGAIGSADALEKAEEKLVKLMAAYPYD
>NZ_CP051205.1|WP_168803232.1|1530222_1531503_+|hypothetical-protein
MYTSYIGKKFLTYYNQRKKAQYTAEEFFLASFFDLFFKDEGHLMHVANSPFHTAPDKSAVALHGSKSLAQLEGLKERINGNRVYMGTYVGGSAENIEATTSGQLTNMNYAVDKEDMYASWIGAALGIGVKGGYVILIAKEEILWSLYEGWEHYRKYLDQRDELKDRQIETWNGNWLRYGLQTPMKIEPVKMMEKWSIPTQPWVQITFILARQFCELDSLVLYAYNLSQTNTTLGFISLVPSVVNRLFEWRENIFLGEDPGITADQVEMLETYYDFRAACKLGAIGLESLEPKALREYMPKPFGGGKEFIYSTTTDYHFKIFKLWLITMLNRLELLTLADEMAATMKELEKSEKKGRTIKDQLNSKIMESKSVPQFIDKLTEMLAYLPDDHEMLHNVMREALIMPVDHLPLFLSLVRFQYAYRTSKN
>NZ_CP051205.1|WP_168803231.1|1528102_1530220_+|CRISPR-associated-helicase-Cas3'
MKSEIDWRDLWAKDDVKIWEHLEHVEMAMSKICEHLYYTFDTRLARKGAILHDVGKAHPHFQRKIKPIGFVSLAEEVKWGYTHRHELSSLAFLPAFPREEWDVLIDMVVAHHRAIIHDAREGGILDLVDRDRRWMTQHLQDWEEWHEYGRCILQYFGYDCPAISREEAAAALWYAVSYCEKKANGWSRWRGLLLAADHFASAYTFQTGSRLSRLFKKPDLSHVNARQGNELYPLSKLKIDDSRPHTMVSYPTGSGKTEFLIRRCMGRICYLLPYQASCNFMYERLKTLLPFDNVDIQHGTSISLGSRKERSERLAPSLVGASVKVMTPHQVIGIVLGTHGFESIMLDLEGCDVILDEIHTYEGITQAMVLEVVKTLVRLNCRIHVATATMPRCLYNAILEILGGVESVYEVTASVEVLDSYDRHTIHLLEDDATVPGILETAIGGEMKCLLVFNRIDAAQKAYEKYEQMFKGVPVLLIHRRFSRLYRRKAEKRLQQLNRKKVPCIVIATQVVEVSLDIDFDLMLTQCAPLESLIQRMGRTNRTGRHPTVPVYVLTPVGSSWPYNKEILERSYALLPQDGEWHERDIQSKLDALYPSLNLREIDSHLIYYNDRYGIRELTNVRNPILSMMMKSDCFTCILKEDESRYKKAGWQQRLMMEIPITWGIIKGNRLEGTQLSVGSKPFVVNQTKSSHQKMGLMLKEEKSS
>NZ_CP051205.1|WP_168803230.1|1527534_1528113_+|hypothetical-protein
MQYYVVKYSGPFGFIKPWTAVRDSETFSQQFLTPSIVEGMEKKFFPELLQEKGAGKVIRRHRLNYCGMDVQLERTWSKGGFKYQKEKGVYKSNQSTLKRGVLLMPHLYLAFSEYSYAERAARQTICLCRNEDLLFPDNVEEMSEDKFNEIHGFELHPADVHNGFKVGHNRFEEGASIYGQLVITGYPIRHEE
>NZ_CP051205.1|WP_168803229.1|1526860_1527526_+|CRISPR-associated-endoribonuclease-Cas6
MRLILRVCKSKNIIYFNQQQVFLTGTLHKWIGANNSIHGKISLYSFSWMQNVDIMSNGIRTRDDSYFFINAYDTTMVKRIVQGIQQDPTICFGVEVKDITIMETPAFQERQEFFPASPVFVKKYVDHKKDKHLLFDDPEVGMQMTTVLKRKLRQAGLSDEGVKVSFNTAHPNARYKLITYKTISNKASLCPVVVEGTPEQVAFAWEVGVGNCTGIGFGALK
>NZ_CP051205.1|WP_168803228.1|1525112_1526078_+|hypothetical-protein
MQQTTLSSGQWPVINYNDWKDTLATVHLWTQIVGKIRLRQMPWLNHSWHVTLYVNPYGLSTGSMPYRHGIFQIDFDFIHHQLVITTSSGGKEALGLRPRTVADFYASLFDKLKSLQIDVTIYPVPSEMPDAIPFTKDQLHQSYDQHQMENFWQALVRIHNVFTRFRAGFTGKCSPVHFFWGAFDLAVTRFSGRDAPQHQGQMPNMPAVVMQEAYSKEVSSCGFWPGNDQFPEAAFYAYAYPAAPEFAAQPVQPAAAFFSPEMGEFLLPYAAVQASDDPEGTLMAFLRTTYEAAANTAHWDRKALECDHSDLEEAYGCYKVR
>NZ_CP051205.1|WP_168803227.1|1523893_1525063_+|acyltransferase-family-protein
MDNRTSWADNLRSFITVLVVAHHSSLAYTTFAWFDKTAYIRSTHPVVDAARSRGLDIFEDFNDVFFMSLMFLISGIFVFRSLQHKGAGKFIRDRFYRLFLPFLIGVTVLMLLAYYPAYYLAHGRHDIAAYVVDFFTVAAWPVGPPWFIWVLFAFNIVVAVLFPLVQHRITRWNQWLTGLQQHPVKIVLYWFLFSWVLYVPLVLLTDAGRWTGIGPFDFQVSRVLLYFGYFSLGILIGAGGLACSIFADGSVWVRYWWCWLLAAAGVYVTLKGSEAPLTAMMARQELSVLHANLIYRSVWILSCTLSGIAFLTTFKSLMNRTGAGWQSLSANAYGIYLVHYIFVLWCQYLLLDVPLTAWPKFLLTFVASWLLSWGLTAIVRKNRTIGRYL
>NZ_CP051205.1|WP_168803226.1|1522844_1523723_-|alpha/beta-hydrolase
MNHSTKAWLIVLVTCICFKPGKAQQPAAKGYAPVNGLKMYYEVQGNGAPILLLHGAYMSIEGPFRQMMDSLSRTRKVIIFEAQGHARTADINRPITCENMADDAAALLKYLKIDSADVFGYSMGGGTALQLAIRHPQKVKKLIVASASFKKSGMQPELIQMMPGFKAEYLEGTPMKMVYDSLAPNPKNFPVLVEKLKALDTDVQDWPASAISGIQSQTLLIFGDADAIVAEHAVEMFRLLGGGKMGDMGPLPNKRLAILPGTTHMGVMMRPQRLLPVMEDFLKQDAIPPGYM
>NZ_CP051205.1|WP_168803225.1|1521711_1522779_+|alpha/beta-hydrolase
MKKLLYLLVMMSGAILACSKNNDTEEMLHLQADSSLQGPIQKPLSGYGSDGSYEVAEADFDNPQYAGTQVAVFYPKGITSPRPTIFFAHPFGGENKAYNIELYHFIAKKGYVVVFVPYRTIDISVDHRYQTLWEGFVKAADKYPGIIDTRKVGFMGHSFGGGACIDLAYKAFTEKGWGQDARFLFTMAPWYSFNWNSPFTTAQQLQSFPANTKMIAQVYDEDDVNDHRMSVDIFKHINIPDSEKDFVYVRSSVINGYDYVTDHVMPSSRKAFDALDYYGVYRLLDALMDYSFNANANAKSVALGNGSAAQATMPSYKGQSMAPLEVTDNPVPKYPQSKYQFPCGSNTNPRNSYCE
>NZ_CP051205.1|WP_168803224.1|1521328_1521715_+|hypothetical-protein
MVLKTKTRPAFLAAFLMLITFAASAQNKAILKDSTPEQLAKMQTEWMQEKLGLSTTQTAQVYDVNLQYARKNAPLLQSTAGKRSRFKKLKALQEEKLAALGKILDADQYKNYEALRKQMLNSIKESRK
>NZ_CP051205.1|WP_168803234.1|1534693_1536337_-|DNA-alkylation-response-protein
MSGPGFDFEHVSNQVPVLENYNTFTTHPVLQNTLRAYGGSWAMPLATEMGQLMGSHEFQEAGILANTHLPVLHTHDRFGNRLDTVAYHPAYHQMMTAAIRHQVHSIAWTTAEKGGYLAHSVLSYLKQQIDEGSSCPLTMTFAVVPSLQIAPDIAREWLPRVLSTIYDERHLPCTEKHGVTFGMAMTEPQGGSDVRANITMAQPAGDGSYRITGRKWFCSAPMSDAFLVLAQAPGGLSCFLLPRFTPDGAKNQLRFQRLKDKLGNRSNASGEVEFHGAWARIIGEEGRGIANIMEMVRHTRLDCAVGSAATLQRALAEAIHHCQHRHTFGKSLLHHPLMQNVLTDLALESAAATTFAMRLAKGFDDAKTDEAALHFTRIATAVGKFWNTKRAVLAMGEIVECLGGNGYVETSILPRLYRDVPVNAIWEGSGNIQALDVLRAMQKEPASVAALMQYFQQGAGLHPLLKRHLEGLQLLLARPSDYERSARTIVEKMALAIQAIELIQTASPEMAEMFCQARLRADRSLTWGALEEMKGWEQVVAGVYSGE
>NZ_CP051205.1|WP_168803235.1|1536411_1536792_+|nuclear-transport-factor-2-family-protein
MVQRENIIKAYVEAYNNKDVDGMLHDMAEGVVFENVSGGTVTLSIKGRNDLRAQAEQVLPVFTERRQTIRAFRHEGDQAAIDIDYHAVVAIDLPNGLKKGDTLALTGQSVFTFSAEGKIVKLTDIS
>NZ_CP051205.1|WP_168803236.1|1536836_1537958_-|AhpC/TSA-family-protein
MRTIALTAACLLPVLAFAQEGPYTISGSIGKDNKFEKAYLYSSNSKGRVIDSVAINDGRFTFTGKTDIAARAFLFTGNTLSSSFTANHLVFYLEQGNIKVESADSIANATVKGGAANTVHQQYKTASSDVTKRSDALSKKYYGTPPAERQQEAFKQQYQADNKAIAAAQQKVLTAFIKAHPNTTVSLDALTEWAGYDPDPAVAEPVFKLLSPTVRKSKSGQQFANLLESQRRTAIGVVAPEFTQNDTLGNPVSLKDFRGKYVLVDFWASWCGPCRQENPNVVAAFNKFKDKNFTILGVSLDNENGKSFWMQAIHDDQLQWTQVSDLKGWKNEAAKMYGVQGIPANFLIGPDGKIVAKNLRAEALEKKLASLLQ
>NZ_CP051205.1|WP_168803237.1|1537996_1538905_-|hypothetical-protein
MKPIYVSLLALVACCIGCSKEDKPEITPDLGIEKQFTPPADAPAEVKDLYNRYGVWVRMDFNHWKEVTNGVLVTDPINRWGVAKIDNDQRAGATIYAQTLLSNVSEKFAKKFFPLELFFVKSYGGSFWMDDFKVLGRSRLVICWPNQIYGALPVTDPANHYFKDSVLVRMTWGNLGGMVAARFDSPLTEFVLAGKAYDGGEARDKVFKQFEKDKDEDARDKAFDQIALNGGFITSVGSINFESDFGEWFRLLATESYANIKAKYLDSSPARARKYEVIIRFFNSYDWDIQAAGNKYREKLGH
>NZ_CP051205.1|WP_168803238.1|1538930_1540382_-|RagB/SusD-family-nutrient-uptake-outer-membrane-protein
MKFRYLTPLLLLSLIFAGCNKMLDIKPVNRMMPVTISDYESVLLGGYPRVDYFMKTELMTDNVYANLNIIASAQKDLDLWFTWSPSKLADGVETDPYWGQLYTSIYYANTVLDNFNERQPASNEKELFETVKGEAYALRAWSYFYLANYYAEPYSPATLKAHGVPMPLTAKDVHQNTQNNVREPLEKVYTQIVSDLDQASVLLAGKKSRNKFRFDASAVQALRARVNLFMGDYEKAISAASDVIVNKPLSDMNNMQTRIDDKEDRYAFTGNVGVIDGGDYKNEILFFTGGVANTNIYYHANYMFRPSQELFALCNRSTGGKDYRRYIFATFADMNTNEGKQNGPTLYNMYAKQENPCYYIGLKVSEAYVIRAEAYARLKQKDKAIADLNALLVRRIRKGEFVALKAADFSDETLVSRILEERRVETAFEGGLRWMDLRRLGKPALSHVYKNGQIYNLKQNDNRYLLQIPPSELNNSPSIPLNP
>NZ_CP051205.1|WP_168803239.1|1540396_1543918_-|SusC/RagA-family-TonB-linked-outer-membrane-protein
MMKLTGMLMLAFCLQVSARVYSQKVTLTGRNASVQQLFSTIRQQTGYLFLYSNETLKNTRAVSAQLTDVPLKEALDYITSNQPITYSIEENNTILIKPKPVADIPAPVLQRINGTVRDARGMPLIGVTVKIKGTNGGTITDEQGAWYIQAADEATVLVFSFIGYKNHEEPIKGRTVIHVVLSQEDKSMNEVVVTGYQKVERRSLTSSITSLKTENLKTINQPNIDKLLQGQVPGMVVMSTSGAPGAVPQIRIRGTSTLSGNTQPLWVVDGIILDDPINASVDDIMTNRNLIASGIGGINVEDIESINVLKDAAATAIYGTKAANGVIVLTSKKGTAGKTRINFSSFATVGMRPRIEDAYMMNSKERIGVNLEMMRRGVLTAGSSRAGEYGTSTDFERALVDVHDHKITWADFEKKVNQLESVNTDWFDYLFRNSFTHRQNLNISGGNEKTTFYLSGSYMDEQATALQTGMKTYTGSLKVYTKLHPTLRVGGMLDLNRRDNSSFFATDSRENPFEWSIYTTRAQNAYDENGQFNHLYYTGIKYNFLENRNYGWRNSQNFGIRGTLDLEWKPINSLIFSSLFSFANQNTTDEDVATENSYFVKSRQRDYYIVIDYQGVQLWKEGGYRKGRNNNNKSLTLRNQVSFMPVLNAHHRFDVMAGQEIRTSRYEDEVTEIYGYVHERGRQQMPQFELMKQIGRPYWSESLNQTAAVSYFGTTGYTYKNRYTVSFNARTDGSNRFGLRTNQLFQPLWAVGANYQMKEENFFANKDWLSYLTLRASYGSQGNVASQAYSDLVATIGKPDLANTDNYLIINAPKNPNLKWEKNYTTNLALEIGLWKRRVMATVEWYHKKGVDLLGSKRVSQVSGFNTLQVNWASMKNTGLEVSISTINIDRKDFRWSTNINAGYNRNEVLDVYSLPTVDGMTNAQRYDYAASAVVGKPINGLWSYRFAGLNKDGRATFYTAKPGETVSSGMRNINGLEYSGSTMPLVQGGFTNTISYKKFTLSALFIGSFGNVIRLRNLTSSDLFYYPEPTQNLSAEWVNRWQQPGDELTTNIPRLESETNIPGLTDVSPYNGTMYNNSDLRTVKGDFVRLQNLSLSYDLYNAHLRKSGIQNMRFMLQGNNLHVWKNSALKGQDPEATGSVMKYDNTRSANVSFGNTYLPLPRSYSFSFSLQF
>NZ_CP051205.1|WP_168803240.1|1544246_1545416_-|FecR-family-protein
MDQNRLEYLFSRNAAGQATPDELREFDALMRQPAHEAAIKTAIDQLFRTTSGTATMPEKAIQATLQHITGKPASSSVVRYLRRSWWAAAAGLLLLGSGAWLLTRPRHEAVAPLADKVPGGNKAVLTLADGSTVALDSSGQQVIGQQQTTIRQSGGQLQYSVQARSAVTAYNTLTTPRGGQFRVILPDGTAVWLNTASALRYPTAFNGADRTVELQGEAYFEVAANAAQPFRVKTARQEIQVLGTSFNINAYTNEAYTVTTLVDGRVKVNTPGKDAGVVLEPGQQAIAARNGDQPLTVARTFAPDVIAWKNGLFLFDNADLETVMRCLERWYDIEVKYEAKPDIHYTGQIARSQPLSKVVHMLEQTGQARFRLVRAGQGQQAKDRIIILE
>NZ_CP051205.1|WP_168803241.1|1545515_1546118_-|sigma-70-family-RNA-polymerase-sigma-factor
MRGSQYNEREIVARIAKGDESAFAVFFRHHYQKIYEVGLMLTQTESVAEELVQDVFLKVWKQQAQLPDIMDIPSWLFIIARNDAYKALRRSTRLKVILDTLELPLPVSNETDEQIIYRNYHELVNKAVSQLPLRQQMAWRLSREEGLKREEIAARMQIRPDTVKEHLSLAVKNIRSFLESHDAFMIGAELIFISTLHMLN
>NZ_CP051205.1|WP_168803242.1|1546246_1547053_+|hypothetical-protein
MDNTFIQELDGKPLSTADMPRLMALQYGHFTAMQVRSRKVKGLRLHLERLARSSNQLFGCQVPEQHLLDCLHHITQEQEDCSLRLNVFTTAFGQTIIREKDLYVLITKTPAVEPATQPLKVKSAPFKRLLPEIKYGGIVSGILAYRRQAMAAGFDDVLYVDEQQHISEGSIWNVGFYDGQSIVLPATPALPGIMVQLLSDSLWGNGVAVVHRNISLTQLYEYKNAFYTNSVNHRGMITQIDQQVFDHSQETLADILERAYEAVPWDNL
>NZ_CP051205.1|WP_168803243.1|1547060_1547804_+|class-I-SAM-dependent-methyltransferase
MKENKYDDPGFFENYSRMARSVEGLNAAGEWEVFRRLLPPLQNKRVLDLGCGFGWHCRYVMEQQAASVVGMDLSEKMLEQARLRNNGPGITYLREAMEDINFPPGSFDVVLSSLALHYVEHYDLTCRKIYDCLSPGGHFVFSTEHPVFTAIAAQDWHYDATGQRQHWPIDHYQDEGRRVARFLDNDVVKYHRTVSTLINGLLDAGFSVSRVEEPKPSPAVLEKYPEMKDETRRPIFILIAAQKPSAV

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Crispr_ID: NZ_CP051205_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_4

1986412-1986513

Orphan

Consensus_repeat	Method
CGGTTCTTTGCGTTCTTACCAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_4

>merge|NZ_CP051205|4|1986412-1986513|CRISPRCasFinder
CGGTTCTTTGCGTTCTTACCAAAAAACACAGGTCTTATATTCCTCTTTGCGGGAAAATGATCTCAATGGTAACCTTCGGTTCTTTGCGTTCTTGCCAAAAAA

>NZ_CP051205|4|4|1986412-1986513|CRISPRCasFinder
CGGTTCTTTGCGTTCTTACCAAAAAA	CACAGGTCTTATATTCCTCTTTGCGGGAAAATGATCTCAATGGTAACCTT
CGGTTCTTTGCGTTCTTGCCAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168803541.1\|1983644_1986140_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379720
NZ_CP051205.1\|WP_168803536.1\|1978532_1979732_-\|DUF763-domain-containing-protein	unknown	unknown	gnl\|CDD\|377525
NZ_CP051205.1\|WP_168803550.1\|1996677_1997844_-\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|235406
NZ_CP051205.1\|WP_168803545.1\|1990737_1991286_-\|putative-glycolipid-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377662
NZ_CP051205.1\|WP_168803543.1\|1987724_1989638_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274514
NZ_CP051205.1\|WP_168803547.1\|1993742_1994543_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	unknown	unknown	gnl\|CDD\|234823
NZ_CP051205.1\|WP_168803542.1\|1986613_1987372_+\|DUF695-domain-containing-protein	unknown	unknown	gnl\|CDD\|368292
NZ_CP051205.1\|WP_168803540.1\|1981141_1982923_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|131259
NZ_CP051205.1\|WP_168803537.1\|1979739_1980405_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|376760
NZ_CP051205.1\|WP_168803539.1\|1980764_1981022_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168803534.1\|1976194_1977823_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_078672524.1\|1987407_1987569_-\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP051205.1\|WP_168803538.1\|1980496_1980694_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168803544.1\|1989667_1990741_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|240081
NZ_CP051205.1\|WP_168803549.1\|1995702_1996566_+\|metalloprotease	unknown	unknown	gnl\|CDD\|225203
NZ_CP051205.1\|WP_168803535.1\|1977819_1978515_-\|deoxyribonuclease-V	unknown	unknown	gnl\|CDD\|377374
NZ_CP051205.1\|WP_168803548.1\|1994551_1995562_-\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP051205.1\|WP_168803546.1\|1991289_1993599_-\|FdhF/YdeP-family-oxidoreductase	unknown	unknown	gnl\|CDD\|273765
NZ_CP051205.1\|WP_078672521.1\|1982980_1983454_-\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NZ_CP051205.1\|WP_168803533.1\|1975104_1976088_-\|phosphotransferase	unknown	unknown	gnl\|CDD\|270702

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168803541.1\|1983644_1986140_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	3.4328e-94
NZ_CP051205.1\|WP_168803550.1\|1996677_1997844_-\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|235406	PRK05321, PRK05321, nicotinate phosphoribosyltransferase; Provisional.	0
NZ_CP051205.1\|WP_168803545.1\|1990737_1991286_-\|putative-glycolipid-binding-domain-containing-protein	gnl\|CDD\|377662	pfam06475, Glycolipid_bind, Putative glycolipid-binding. This family has a novel fold known as a spiral beta-roll, consisting of a 15-stranded beta sheet wrapped around a single alpha helix. It forms dimers. It has some structural similarity to the E. coli lipoprotein localization factors LolA and LolB. Its structure suggests that it may have a role in glycolipid binding. Its genomic context supports a role in glycolipid metabolism.	4.76066e-55
NZ_CP051205.1\|WP_168803543.1\|1987724_1989638_+\|hypothetical-protein	gnl\|CDD\|274514	TIGR03303, OM_YaeT, outer membrane protein assembly complex, YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog, YtfM, that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244), followed by an outer membrane beta-barrel domain (pfam01103), while the YtfM family typically has a single pfam07244 repeat. [Protein fate, Protein and peptide secretion and trafficking].	0.000840355
NZ_CP051205.1\|WP_168803547.1\|1993742_1994543_-\|formate-dehydrogenase-accessory-sulfurtransferase-FdhD	gnl\|CDD\|234823	PRK00724, PRK00724, formate dehydrogenase accessory sulfurtransferase FdhD.	1.25154e-86
NZ_CP051205.1\|WP_168803542.1\|1986613_1987372_+\|DUF695-domain-containing-protein	gnl\|CDD\|368292	pfam05117, DUF695, Family of unknown function (DUF695). Family of uncharacterized bacterial proteins.	9.78732e-42
NZ_CP051205.1\|WP_168803540.1\|1981141_1982923_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|131259	TIGR02204, system_ATPase_and_permease_component, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.	2.31878e-177
NZ_CP051205.1\|WP_168803537.1\|1979739_1980405_-\|MgtC/SapB-family-protein	gnl\|CDD\|376760	pfam02308, MgtC, MgtC family. The MgtC protein is found in an operon with the Mg2+ transporter protein MgtB. The function of MgtC and its homologs is not known.	8.65506e-42
NZ_CP051205.1\|WP_168803536.1\|1978532_1979732_-\|DUF763-domain-containing-protein	gnl\|CDD\|377525	pfam05559, DUF763, Protein of unknown function (DUF763). This family consists of several uncharacterized bacterial and archaeal proteins of unknown function.	0
NZ_CP051205.1\|WP_168803549.1\|1995702_1996566_+\|metalloprotease	gnl\|CDD\|225203	COG2321, COG2321, Predicted metalloprotease [General function prediction only].	8.45476e-120
NZ_CP051205.1\|WP_078672524.1\|1987407_1987569_-\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.00108061
NZ_CP051205.1\|WP_168803544.1\|1989667_1990741_+\|nitronate-monooxygenase	gnl\|CDD\|240081	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.	5.16276e-83
NZ_CP051205.1\|WP_168803535.1\|1977819_1978515_-\|deoxyribonuclease-V	gnl\|CDD\|377374	pfam04493, Endonuclease_5, Endonuclease V. Endonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents.	1.06609e-107
NZ_CP051205.1\|WP_168803548.1\|1994551_1995562_-\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	3.25855e-167
NZ_CP051205.1\|WP_168803546.1\|1991289_1993599_-\|FdhF/YdeP-family-oxidoreductase	gnl\|CDD\|273765	TIGR01701, Hypothetical_protein_Rv2900c/MT2968/Mb2924c., oxidoreductase alpha (molybdopterin) subunit. This model represents a well-defined clade of oxidoreductase alpha subunits most closely related to a group of formate dehydrogenases including the E. coli FdhH protein (TIGR01591). These alpha subunits contain a molybdopterin cofactor and generally associate with two other subunits which contain iron-sulfur clusters and cytochromes. The particular subunits with which this enzyme interacts and the substrate which is reduced is unknown at this time. In Ralstonia, the gene is associated with the cbb operon, but is not essential for CO2 fixation.	0
NZ_CP051205.1\|WP_078672521.1\|1982980_1983454_-\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	1.0292e-51
NZ_CP051205.1\|WP_168803533.1\|1975104_1976088_-\|phosphotransferase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.4936e-39

>NZ_CP051205.1|WP_168803541.1|1983644_1986140_-|outer-membrane-beta-barrel-protein
MRKVVLLLTGWMFLFNLALTAQQHGNKPPAGNAGNIYGKLLDAQTGKPVEYASVAVLRPDSSVLTGMLSKPNGDFNFENLTPGKYILKVNFIGYEAVFKPVQLTAKSTSLDAGNIKLRANVKSLAAVNVVGEKPAFTMAIDKRVFNVEKNLASIGGTATDVLKQVPSVSVDIDGNVSVRNGAPTIFVDGRPTTLTLDQIPADAIANIEVVTNPSAKYDAEGMSGILNIVLKKNKKAGINGQLSAGVSSLGSTNTGIDFNLRQEKFNFFINYGTRNRKSPMTSRISRKNILSDTTTYTDQLQDGDFYRNFQNGRIGVDWFMDNRNTLTISQGITGGNFNRYNDQIQNEFDIHRELVRYGTGINNSKNGFRNYSTQLGYKHTFAREGEELTADFTYNYATGDNSSEYSLQYYNLKGDTINSPVKPQYRYGSGEGKTTYITGQVDYVRPFSDKSKIEMGLRTNTRKFDNFTNTFGQNYPSGTFTLDSALSNNYHYQEQINAGYVSYSGAHGNFGYQAGLRAEQSNYTGETRFGEKASYKINYPISLFPSVFLSQKFKGDHELQLNYSRRIRRPWFRDLLPTIEYSGQNASRGNPDLRPEFTNSFELSYLKDIAHKHNVLVSLYYRNTDNAITDFYVDTTLNLNGQTQRVLLSYPINASTRNSFGAEFTVRSQITKDWDLTANVNLAQTKISAANQGDNLSNSGFTWFGKLNSNTKLPWNLTLQITGEYESRQILPQGERKPVYSIDAGLKKDMLKNKALSISLTLNDIFNSDRNLSYTSTAFSETENYRKRLTRELRLNATWRFGKMDYNLFKRKNNKSGKDNNNEMGGGDKGE
>NZ_CP051205.1|WP_078672521.1|1982980_1983454_-|acyl-CoA-thioesterase
MDSIYHTITLRFLAEPSDVNFGGKVHGGSVMKWIDQAGYTCAANWSGQYAVTVYVGGIRFFKPIAIGDLVEITATIIYTGNTSMHISIDVFAGNPRQQHKQKTTHCVMVFAAVDDNGKTIPVPKWTPRTANEISMESYAKKLMDLRKDIDEEMKPYM
>NZ_CP051205.1|WP_168803540.1|1981141_1982923_+|ATP-binding-cassette-domain-containing-protein
MQNETTAAVPAPKPGLKWTSLKKTFRLFRYVKPYWVEFALGFVFLLISSLAGLAFPRLLGDLVDPKSVNDLLHGFNKAGLLLVAVLIGQAIFSFFRTILFVNVTEKTLAALRQHVYSHMIRLPMRFFLERRVGELSSRISSDITLLQDTFTTTLAEFIRQMVIIIGGVIILLVTSWQLTAFMLAILPVMMVAAVFFGKFIRQFSKQVQTQVAAANTVVEETLQGIVNVKAFANEFFEIARYRQRTNEAARIGMKSGKYRGAFSSFIILGIFGALVAVIWRGVSMGMSTPQLLSFILYSVFIGGSIAGLAEIYTSLQKSIGATENLLEILDEPEEAITEVAQIAPGEQLGGQISFRNISFHYPSRPDLTILENISFEAEEDQKVALVGPSGAGKSTIVSLLLRLYDPVEGRILYDGKPGTSIPLSVLRSQMAVVPQDVFLFGGTIRENIAYGKPDATEAEIESAARQANAWEFIKHFPLGLETIVGERGIQLSGGQRQRIAIARAVLKNPRILILDEATSALDSESERLVQDALDKLMEGRTSIVIAHRLSTIRQADKIIVLDKGHIVEQGTHAELIGVDGGLYRMLSEMQFSH
>NZ_CP051205.1|WP_168803539.1|1980764_1981022_+|hypothetical-protein
MKVSHLLLAAGISAAMLTACGNGAQNNNQDSMNLNNSGTTDTAAILPDTAPAAQTPPGAINPGEDSARFGTGAGDSSRNPGHKSQ
>NZ_CP051205.1|WP_168803538.1|1980496_1980694_+|hypothetical-protein
MKPFVYKFFMVACVTGILCILLFACNSSREASREADSAAATVPRVDSTSVIPVDTTATKPDTTRQ
>NZ_CP051205.1|WP_168803537.1|1979739_1980405_-|MgtC/SapB-family-protein
MKHLLQTIEEDQILKVCIALLIGAILGLEREYKRKAAGMRTMTLICLSSTIFTILSAELGYPNSSDRVASNILTGVGFIGAGVIFKNDFTIDGITTAASIWIAAALGMAIGMSQYVLAIGGLAGALIVLILMEFTEKSIAEINDKRYYTIYFHEDKFPQVDVEHILNTFGLKFKRMQTVRKEDLIEVNYTVRGKRSKMERLDEFLLQNKHISQFQVQLNPL
>NZ_CP051205.1|WP_168803536.1|1978532_1979732_-|DUF763-domain-containing-protein
MPSYADMPLHYGHVPPWLAKRMALLGGAIVEAIVTGYGKSEVIRRLSDPCWFQALGCVLGMDWHSSGITTSVMGALKKAVNPRSQELGIYICGGKGRHSRETPAELMRIADKTGLPGDQLVHSSKLTAKVDNTAIQDGFQLYLHSFVLSTDGDWAVVQQGMNDASSMARRYHWHSSAFTSYTEAPHTFIYGRNQGMILNLTDTQAAATKTGILQLLEEKPAHLLPEIRNLVMPSHHEVRAENVNLKRLGSVLALAHDIHPANFESLLMLEGVGPRTLQSLTLVSEVIHGTPSRFEDPARFSFAHGGKDGHPFPVPTRIYDETIETLRDALNKAKIGHTDKQEAIRKLSTLAQRMEQDFEPNANFEKVIEREKQDSWKYGGRTVFGKAAPPKDGEQLSLF
>NZ_CP051205.1|WP_168803535.1|1977819_1978515_-|deoxyribonuclease-V
MKDYNTLSVPEATLLQQELRHQVVTAPFKGKIQLIAGADISFNKFSTTVYAGIVLMRFPSLEPVGYSLVVKEVTFPYVPGFLAFREVPALLDAWQQLPQKPDVLVVDGHGIAHPRRMGIASHFGVLAGQVTVGSAKKKLYGTYKEPGEEKGAHTPLTDKQGVVIGTVLRSKQKVKPIFVSPGHLIDVEGSLSLVEQCVRKYRLPEPTRLAHNAVNQFRLGALPAGYTPADL
>NZ_CP051205.1|WP_168803534.1|1976194_1977823_+|hypothetical-protein
MMSYIRSVVCLCLFFIPAGLWAQVPVVTLGPAVEEPLDGWDKLMQLKNGHTFWLHFSKKEGLRVTVYNARREQVATDSVAGSLWNAADLESTEIDGIYEINGQPVIFLQQLVKYVPVFFRLVLDPQTGKLLREDKLGELPTVQHRSVYVQENLASHDCYVEKDPDSDYYAVAFFNGAEIQRNDSIRERIRVMHFSPAHELINTGLYYLPDTAYNYFSYISLSVHGKEKVYMSTVGFNAKRKGNEPWSKVLFSALSPDSATFAHHVLDYTANFRDVSGYQQFLPARNEVKLMLYAPGQRAEGSSGIFLNTLLASGKLRKHQQLSFPELGKNVQINLGYKEDYKGVPQRVYWHADGSGTLLLEALTRYKQGNTQINKLHTNMGDIGVALLDSSGRENETLAVSKYQSITGVCEPFSLHRRMKSEWVFRNKIAALNTNTYLSYDYVNIPNATFILFNDYLQYLETGGQDKVKKPLKYAADANVVCYRFYNGKMERLFLFGAPEVTKGYYCMMGASSYDAVQRVYATVMISRKGTEKKAAVAWIQF
>NZ_CP051205.1|WP_168803533.1|1975104_1976088_-|phosphotransferase
MKTVFPATYSTLCPSALSAFLSEKYALEDVQCQLLVRGVGDTYLARTSADRFILRVYRSTHRSLPQIQEEVALLQALKAAEVSVSYPLQDIAGETIQQLNAVEGERCAVLFSYAPGHPVRLLNDQQCQLLGREMARFHQVSAAFSPVKARWEFNEESMFVRPLTLLQPFFANNAEDYTWLQQAAATAAARLSAMKELPMGYCHFDFLPKNMHFDANSITLFDFDFMGYGWLVNDIASFWQYLSLEVYTKRMTQDEADRQYQLLLDAYREHRPLDEAALEAIPFISLGWWLFYMGFHTTHDQFHAFVQPGHLKLFTGLLRHLANTYWK
>NZ_CP051205.1|WP_168803542.1|1986613_1987372_+|DUF695-domain-containing-protein
MHKDYRPDWDIYTCHIEESPAVIGLDLDLRRFAPLKEKPNAIYITVYLNNPREDGFPQNDEFAIMGEIEDSLVEQLTTNLDAHFVGRTFSNGVRDFYFYTGNLLLHDKFIADAMIKFPDYRYDYGVKEDNNWELYFDFLFPDVYEFQRIQNRKVLRMLRQHGDMSERERPIEHWIHFRTEEDKTAYWEHIRENGFEIAHDMKNDNPEFPFKLCVSRSDKASEATIDSVVMTLWELAQQVNAEYDGWETSIVK
>NZ_CP051205.1|WP_078672524.1|1987407_1987569_-|DUF1328-domain-containing-protein
MLRWALIFFIVAIVAAIFGFGGIAAGAASIAKILFFIFLVLFLISLLSGLLRK
>NZ_CP051205.1|WP_168803543.1|1987724_1989638_+|hypothetical-protein
MRTELKILAAISVTCWLLCWCQLTFAQDKPVADTVPKRGNGLMKKIGEYRDSLRNKEYRQSFIRRITRQDVETPDENLDSVITKSEAYFTPFVGKVIRNIYYRKVKVFGPRNINDTTFTTSMKLIHLANRLHFDSREWVIRQSLFFREGSRLDPFELADNERYLRNRLFFSDARIHVRNANPDSDSVDVEVITKDVFEYGVDLSQFSATNIKTRVSNNNLLGAGQGLQVGFQWRSDYTPTWNTEARYTKYNVFGSFVDVGVGYSTLNNTTPLDTNVYEGTIYVTFNRPLYRNAAKWVGGLTLANNWSINILGREKQTIDSLLYRDYRYTVIDGWAGYNFINNYEHNGTIGHKPNFAVLFRHFNLNFSRTPDQMQFKEDPVYNDHRYYLLEFQVYRLDYFKTRQFFGFGRTEDIPLGYNLKAATGWETWKDRRRLYTGLEAQKYWTTRRQGLFNTSAGVSTFWQEGKLEDAVIHARAEYYSRLFSIRKARFRQFLNLDYLESPNPFFYKPLNINNDNGIWGYRYTKLNGYQRLNFGSETVYYSPLRFLGFKFNFFASLQASMVTAKNDNLFSNPIYMGIGGGFRVKNENLSLNTIKVSGYYFPNAPPLQPKSLLEITTIVDFRFDISALKAPAFLSFF
>NZ_CP051205.1|WP_168803544.1|1989667_1990741_+|nitronate-monooxygenase
MEWQNRLTSLLGIDYPFIQAPMLGITTPAMVAAVSNGGGLGSLPVGGLPPARVAALIAEVKALTRRPFAVNLFTYEVPQADQPEQFEQMQQYLQQLYKTNGLTVPAVAFDTVKTHAYQEQLPVLLEAGISLVSFTFGIPDEASIALLKAGGCVLLGTATSVKEAVALQAAGCDAIVAQGIEAGGHRGSFLPGPLPQVATMALVPQITDRVAVPVIAAGGIADGRGAAAAFCLGASGVQCGSVLLRSPESAATPHHKDKVGAVTDTGTRITRAFSGRWARGIANVLMDGIEASGLPLNVYPVQDALTQAVRKVAKELDNPDFIVMYAGQAAQLAKPLPAATLMEEIRTSAEKILSGQP
>NZ_CP051205.1|WP_168803545.1|1990737_1991286_-|putative-glycolipid-binding-domain-containing-protein
MGPVVWQATLWPATEFLTVTKQEHNNLVKGIINGCTDADPFSIQYEIEVTPEWKVSSFHIRRDGLQPTALKLTSDLNGHWFDKDGNHIEAFDDCTDIDISLTPFTNTLPIRRLTFEQGERKLLQMLYIKLPEFELQKLSQYYTKMEDRLYLYENGDSGFRAELPIDENGIVKDYPGLFTRIY
>NZ_CP051205.1|WP_168803546.1|1991289_1993599_-|FdhF/YdeP-family-oxidoreductase
MSIKGLHTEFTPVKFTGLKLTKPATVAAGIPAVVSSMKHMLEAMNAFRAMKALLELNQKDGFDCPGCAWPDPDDERSPIAEYCENGAKAIAEEATTRKLDPAFFAANSIDSLGALSDYEIGKKGRIAQPMYLAPGATHYTPISWNDAYHKIAAHLQQLDTPDEAVFYTSGRTSNEAAFLYQLMVREYGTNNLPDCSNMCHESSGVALGEAVGIGKGSVTLEDVHQAEVIIILGQNPGTNHPRMLTALQKAKANGAVIIAVNPLKETGLLNFLNPQTVKGILQVQTHLTDIFLQIKINGDMALLKALALLLLEEEDKHPGTVFDQSFISNNTSGYNEYIAHLRQQRLPDLAAACGISEAQLREAAAALMHKQKIVACWAMGLTQHKNSVDTIREVVNLLLLKGSIGKPGAGTCPVRGHSNVQGDRTMGIYEKPADALLQKLEAVYGFKPPYKHGHDVVHAIHAMHRGDAKVFIAMGGNFLSATPDTAYTAKALRNCRLTVHVSTKLNRSHLVHGREAIILPCLGRSDKDIQQQQAQFVTCENSMGVVQMSKGNLHPISAELKSEPVIVCEMARAILGPQSKVPWEQYTQHYDHIRDAIEKVIPGFDDYNKRVRHPGGFYLPNGSRTGQFNTGTGKANFNVAPVTTTPLGREEYLMMTIRSHDQFNTTIYGLDDRYRGVHHERRVIFMNPQDIASGGFTAGQVVDLYNYHGQTERIAPGFIIVEYDIPAGCTATYFPETNVLVPVNTVADKSNTPASKSVIIQIKSSTIKR
>NZ_CP051205.1|WP_168803547.1|1993742_1994543_-|formate-dehydrogenase-accessory-sulfurtransferase-FdhD
MTNAVVHTRIKKITATGVTDTEDILAAEEPLEIRLEHGPTHNRRQQNIAVTMRTPGQDEELAAGFLFTEGIIPGTAAIRQVTLAETPGGSIATVALKEQVVPFLDKSQRHFQATAACGMCGKSSIENIHTGVNVSHSDRRAPGQWLSQLPEQLRARQALFAHTGGLHAAALVDEQGRIQLLREDIGRHNAVDKVIGAALAQQFPLPQSLLLLSGRAGFELIQKAAMAGIPVIAAIGAPSSMAVKMAAAWNITLIGFLKEDRYNQYT
>NZ_CP051205.1|WP_168803548.1|1994551_1995562_-|NADP-dependent-oxidoreductase
MKIQQILLNERPEGLPAADTFKTVDVELPGLNDGEVLLQPLYFSVDPYMRGRMSDARSYIPPFKVQEPIESGGVATVTESKDARFAPGDLVMPGGGKNFFPWATGFVFSGDHLRKIDASIPPSYYLGVLGMPGLTAYFGLMDIGKPKAGETVVISGAAGAVGLVAGQIAKIQGCRVVGIAGGEEKVKLLTSDFNFDAAINYKGNTHLGAAVAAACPNGVDIYFDNVGGEISDAVMEHLNFFARIPVCGQIALYNSTEVPIGPRVQPTLIKFSVLMQGFTIGNYAHRYLEGIQQLGEWIRAGKIKYTETIIEGFDQLPAALLGLFSGQNSGKMIVKV
>NZ_CP051205.1|WP_168803549.1|1995702_1996566_+|metalloprotease
MRLDDERLSDNVEKRSGGGKRTLIGGGIGGVIVIVLALLFKQDPNQVNQVLQQVQGPGGTEKVEQLSKENASAIELFSSKVLASTEDVWAAEFRRLNMEYERPKMVLFEDATTSGCGAAESAMGPFYCPADRMVYLDATFFKELEDRFGVKGDFAKAYVIAHEVGHHVQNLLGISRQVQAMRSRLSETEYNKLSVKLELQADFLAGLWANHAQQMRNILEAGDIESGLNAASAVGDDKLQEASTGRVVPDAFTHGTSQQRMFWFKKGFDSGDLSQGDTGIGLGQAGR
>NZ_CP051205.1|WP_168803550.1|1996677_1997844_-|nicotinate-phosphoribosyltransferase
MKLNSILDNDFYKFTMQHCVIKLFPKARARYKFINRGQHAYPPGFDKLLRRAVDEMQYLQLSQEEKDFLAVTCPYLDPTYLDFLQGYRYNPSEIHITQHGDQLEVHADGYWYRTILWEVPLMSLICELYYEATGQQRVPDEEVIAITRAKIERYKELNITIADFGTRRRHSLAVQKLVVQTLREYGGHTFIGTSNVHLAMRNGVKPVGTHAHEWFMFHAAKYGFKMANMLGLEHWVHVYRGDLGIALSDTYTTPVFFEQFDKKFAKLFDGVRHDSGDPLRFADETILHYQGKGINPLSKTIIFSDGLNYEKVAAIAAHCRGKIGMSFGIGTNFTNDVGLTPLNIVVKMYEARPEDAPRWTPVVKLSDEKGKYTGDEHMIALAKEMLEL

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Crispr_ID: NZ_CP051205_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_5

2112057-2112136

Orphan

Consensus_repeat	Method
GGTTCGGTTTACATCGATTGCATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_5

>merge|NZ_CP051205|5|2112057-2112136|CRISPRCasFinder
GGTTCGGTTTACATCGATTGCATGATGTTACAATCCCGGATTCCGTTGGATGGATCGGTTGGTTTACATCGATTGCATGA

>NZ_CP051205|5|5|2112057-2112136|CRISPRCasFinder
GGTTCGGTTTACATCGATTGCATGA	TGTTACAATCCCGGATTCCGTTGGATGGAT
CGGTTGGTTTACATCGATTGCATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168803640.1\|2111679_2112027_+\|YraN-family-protein	unknown	unknown	gnl\|CDD\|376717
NZ_CP051205.1\|WP_168803648.1\|2121196_2122525_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP051205.1\|WP_168803649.1\|2122615_2123347_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180838
NZ_CP051205.1\|WP_168803634.1\|2097891_2098149_-\|acyl-CoA-binding-protein	unknown	unknown	gnl\|CDD\|376410
NZ_CP051205.1\|WP_168803635.1\|2100286_2102710_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|379224
NZ_CP051205.1\|WP_168803644.1\|2115223_2115883_+\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224996
NZ_CP051205.1\|WP_168803639.1\|2109233_2110184_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176191
NZ_CP051205.1\|WP_168803641.1\|2112409_2112733_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168811712.1\|2110259_2111474_-\|mannose-6-phosphate-isomerase,-class-I	unknown	unknown	gnl\|CDD\|185085
NZ_CP051205.1\|WP_168803645.1\|2115965_2117615_-\|M1-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341066
NZ_CP051205.1\|WP_168803636.1\|2102706_2104002_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	unknown	unknown	gnl\|CDD\|273555
NZ_CP051205.1\|WP_168803643.1\|2114347_2115097_+\|menaquinone-biosynthesis-protein	unknown	unknown	gnl\|CDD\|270352
NZ_CP051205.1\|WP_168803638.1\|2106601_2109202_+\|polynucleotide-kinase-phosphatase	unknown	unknown	gnl\|CDD\|274963
NZ_CP051205.1\|WP_168803647.1\|2119406_2120180_+\|acyl-CoA-desaturase	unknown	unknown	gnl\|CDD\|224316
NZ_CP051205.1\|WP_168811714.1\|2120306_2121197_+\|decaprenyl-phosphate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|260126
NZ_CP051205.1\|WP_168803637.1\|2104153_2105542_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	unknown	unknown	gnl\|CDD\|274962
NZ_CP051205.1\|WP_078672615.1\|2098347_2100141_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP051205.1\|WP_168803642.1\|2112865_2114206_-\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|236452
NZ_CP051205.1\|WP_168803646.1\|2117660_2119304_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173853
NZ_CP051205.1\|WP_168811710.1\|2105541_2106618_+\|nucleotidyltransferase	unknown	unknown	gnl\|CDD\|313370

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168803640.1\|2111679_2112027_+\|YraN-family-protein	gnl\|CDD\|376717	pfam02021, UPF0102, Uncharacterized protein family UPF0102. The function of this family is unknown.	7.86406e-32
NZ_CP051205.1\|WP_168803648.1\|2121196_2122525_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.30905e-33
NZ_CP051205.1\|WP_168803649.1\|2122615_2123347_+\|SDR-family-oxidoreductase	gnl\|CDD\|180838	PRK07102, PRK07102, SDR family oxidoreductase.	1.23135e-130
NZ_CP051205.1\|WP_168803634.1\|2097891_2098149_-\|acyl-CoA-binding-protein	gnl\|CDD\|376410	pfam00887, ACBP, Acyl CoA binding protein.	2.21242e-30
NZ_CP051205.1\|WP_168803635.1\|2100286_2102710_+\|AsmA-family-protein	gnl\|CDD\|379224	pfam13502, AsmA_2, AsmA-like C-terminal region. This family is similar to the C-terminal of the AsmA protein of E. coli.	1.77526e-11
NZ_CP051205.1\|WP_168803644.1\|2115223_2115883_+\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|224996	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only].	2.52768e-32
NZ_CP051205.1\|WP_168803639.1\|2109233_2110184_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176191	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	6.16155e-92
NZ_CP051205.1\|WP_168803638.1\|2106601_2109202_+\|polynucleotide-kinase-phosphatase	gnl\|CDD\|274963	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase. Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring. [Transcription, RNA processing].	0
NZ_CP051205.1\|WP_168811712.1\|2110259_2111474_-\|mannose-6-phosphate-isomerase,-class-I	gnl\|CDD\|185085	PRK15131, PRK15131, mannose-6-phosphate isomerase; Provisional.	1.56985e-97
NZ_CP051205.1\|WP_168803645.1\|2115965_2117615_-\|M1-family-metallopeptidase	gnl\|CDD\|341066	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain. This family contains mostly bacterial and some archaeal M1 peptidases with smilarity to the catalytic domain of aminopeptidase N (APN; CD13; alanyl aminopeptidase; EC 3.4.11.2), a type II integral membrane protease belonging to the M1 gluzincin family. APN preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and, in higher eukaryotes, is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation, thus considered a marker of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. APNs are also present in many pathogenic bacteria and represent potential drug targets. Some APNs have been used commercially, such as one from Lactococcus lactis used in the food industry. APN also serves as a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs have also been extensively studied as putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established.	1.18517e-144
NZ_CP051205.1\|WP_168803636.1\|2102706_2104002_-\|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase	gnl\|CDD\|273555	TIGR01326, Includes:_O-acetylhomoserine_sulfhydrylase, OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities. [Amino acid biosynthesis, Aspartate family, Amino acid biosynthesis, Serine family].	0
NZ_CP051205.1\|WP_168803643.1\|2114347_2115097_+\|menaquinone-biosynthesis-protein	gnl\|CDD\|270352	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold. This group includes the SCO4506 protein from Streptomyces coelicolor and related hypothetical proteins. SCO4506 is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. SCO4506 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.39273e-81
NZ_CP051205.1\|WP_168803647.1\|2119406_2120180_+\|acyl-CoA-desaturase	gnl\|CDD\|224316	COG1398, OLE1, Fatty-acid desaturase [Lipid metabolism].	5.77581e-27
NZ_CP051205.1\|WP_168811714.1\|2120306_2121197_+\|decaprenyl-phosphate-phosphoribosyltransferase	gnl\|CDD\|260126	cd13963, PT_UbiA_2, UbiA family of prenyltransferases (PTases), Unknown subgroup. Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.	1.37258e-116
NZ_CP051205.1\|WP_168803637.1\|2104153_2105542_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	gnl\|CDD\|274962	TIGR04074, Methyltransferase_type_12, 3' terminal RNA ribose 2'-O-methyltransferase Hen1. Members of this protein family are bacterial Hen1, a 3' terminal RNA ribose 2'-O-methyltransferase that acts in bacterial RNA repair. All members of the seed alignment belong to a cassette with the RNA repair enzyme polynucleotide kinase-phosphatase (Pnkp). Chemically similar Hen1 in eukaryotes acts instead on small regulatory RNAs. [Transcription, RNA processing, Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP051205.1\|WP_078672615.1\|2098347_2100141_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP051205.1\|WP_168803642.1\|2112865_2114206_-\|adenylosuccinate-lyase	gnl\|CDD\|236452	PRK09285, PRK09285, adenylosuccinate lyase; Provisional.	0
NZ_CP051205.1\|WP_168803646.1\|2117660_2119304_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173853	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain of nickel/dipeptide/oligopeptide transport systems, which function in the import of nickel and peptides, and other closely related proteins. The oligopeptide-binding protein OppA is a periplasmic component of an ATP-binding cassette (ABC) transport system OppABCDEF consisting of five subunits: two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Similar to the ABC-type dipeptide and oligopeptide import systems, nickel transporter is comprised of five subunits NikABCDE: the two pore-forming integral inner membrane proteins NikB and NikC; the two inner membrane-associated proteins with ATPase activity NikD and NikE; and the periplasmic nickel binding NikA, which is the initial nickel receptor that controls the chemotactic response away from nickel. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand binding domains of ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	2.50094e-135
NZ_CP051205.1\|WP_168811710.1\|2105541_2106618_+\|nucleotidyltransferase	gnl\|CDD\|313370	pfam10127, Nuc-transf, Predicted nucleotidyltransferase. Members of this family of bacterial proteins catalyze the transfer of nucleotide residues from nucleoside diphosphates or triphosphates into dimer or polymer forms.	6.35018e-15

>NZ_CP051205.1|WP_168803640.1|2111679_2112027_+|YraN-family-protein
MHPQETGREGERIAQEYVRRFCTIRHTNWKCGRKEIDIIAENGGTVFFIEVKARNGDRFGWPEEAVDRRKQAHIQLVAAAYLEHFHLYPEAVRFDIIAVTFTAAGHELLHLRDVF
>NZ_CP051205.1|WP_168811712.1|2110259_2111474_-|mannose-6-phosphate-isomerase,-class-I
MVFMKLFRLDGKIQHYAWGGSTYIPALLGIAPSEKPSAEYWMGAHPSAPSAITTSNGPVPMNELIQQDPAGIVGPQVWQQFRELPYLFKILDVKDMLSIQVHPTKEEAEKGFARENAAGIPLNAPHRNYKDANHKPEIMVALSEFWLLHGFLPEDKLQQVLLDTPEFTSLVGIYEKEGYYGLYKSVMEMPQALANIILRPLTDRLIPDYRAGKLSKSDPAFWAARAVLNDPNGADNLDRGIFSIYFFNIMHVQPGQAVFQDAGIPHAYLEGQNVELMANSDNVLRGGLTPKHIDVPELLKHTRFEAVHPKVLTGDSISGGLEKIYPTPAPDFVVSKINISAGQVYTYTTKAAEIMIVMSGAATIKGSDTLDLHKGQCVMAAYGESYEITTSGNVEIFKATVPVK
>NZ_CP051205.1|WP_168803639.1|2109233_2110184_+|NADP-dependent-oxidoreductase
MKAIAVSEFKGIPTLMDLPKPAVRPGTVLVKVQAAGINPFDWKMIDGIMNNGKTPHQFPLIMGVDGAGVIEEVGEGVTHFKKGDLVYGQFIHMPIGEGSYAEYAIVPEKAGLTMAPMRISPEEAAAVPTSGMTALQLIDKLKLQKGDVVLINGATGGVGSFATQIAAAKGLKVIATVGDEADAKRMHQLGAAVTVNYKKAPLADQVKAKFPQGIDGLIDMVSDKAGFENNLQLVKEGGGAFTTLFVADDEALKARNLHGGNFETEGGPAALDQLSRLIDQGQIKVPVENRIRLEDVPAAIAASREGRASGKTVIIM
>NZ_CP051205.1|WP_168803638.1|2106601_2109202_+|polynucleotide-kinase-phosphatase
MARRNNLSHISIPELSLVLLVGPSGAGKSTFARKYFKPTEIISSDVCRGLISDDENNQAVSADAFELARFIAAKRLKHGLLTVIDATNVQSESRRDWIRLAREYHVLPVAIVLNLPEEVCSKRNRDRPDRNFGGHVIPQQISQLKRNLRHLKEEGFRQVYELRSEEDVTMLETISRTPLYNNKREEHGPFDIIGDVHGCYDELCMLLEQLGYGIDREHAELISAPQTTNEDGYTRTRKPVFVGDLVDRGPASPQVLRLVMNMVNNGAALCVPGNHDAKLLKWLNGKQVQLKHGLEKTVEQLGAEPPEFLESIKTFIDGLISHYVLDDGKLVVAHAGLKESMQGRGSGAVREFCMYGETTGEIDEFGLPVRYNWALEYKGKAMVVYGHTPVPQAQWLNRTIDIDTGCVFGGSLTALRYPEKELVSVPALQQYAVPARPIGYNADSSLSVQQQYDGVLDIADFIGKKIVNTRYSHSITIREENSIAALEVMSRFAINPRWMIYLPPTMSPVETSTLPGLLEHPEGGLQYFRDTGVDKVVCEEKHMGSRAIVVVCRNEDVARDRFGVDGEGIGVVYTRTGRSFFADKGLEQAFLARVNTALESSGFYNDFQSDWVCLDCELMPWSAKAQALLQQQYAAVGAAAGHALPAVTAALEQAVRNNVPAQLLLEKYRSRQQQVSDYVAAYRQYCWPVHRLEDYKLAPFHIMATEGKTFFDKDHEWHMTHIRKICEAEPELLLATAYRVVQIGDPESELAAVQWWEQLTAAGGEGMVMKPYSFLTKDARGLVQPAVKVRGKNYLRIIYGPEYDAPENLARLRSRGLGAKRSLALREFALGLEGLERFVGKEPLQMVHQCVFGILALESEPVDPRL
>NZ_CP051205.1|WP_168811710.1|2105541_2106618_+|nucleotidyltransferase
MTYTTLKEQREYLLLECISGSKAYNLQVPSSDTDLKGVFILPQREVYGMSFTDQVANESNDEVYFEIKRFLELLEKNNPNILELLSTQQENCLFRHPLMDLVKPEDFLSRLCMDTFAGYAQTQIKRARGLNKKINQSFPETRKDILEFCYVVQGSQSVPLKQWLEAHQLQQEDCGISRIDHFRDAYALFHRYQFPRPVKLKGLFSGADANDVQLSAIPQGVVPAAIMHFNKDGYTVYCKEFAAYWDWVEHRNEARYQHNQALGADYDSKHMMHTFRLLTMAEEIARYREVRVFRKDRDFLLRIRTGEFTYDTLLQMAAEKLTNIQELYAQSDLPERPDPALTQRLLIKIREEFYGKKK
>NZ_CP051205.1|WP_168803637.1|2104153_2105542_+|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1
MLLTITTTRNPATDLGYLLHKHPAKVQTFPLTAGDVHVFYPEATAEKCTAALLLDLDPVRLTRKSGPGGNDFALEAYVNDRPYVASSFMSAAISQAYSSAMNGRCKDKPELVDVAFPLEVGLSVLPVNGGEPLLRSLFEPLGYEVNVQSFPLDSRHPEWGQSRYYQVTLKNTLPVWMLLSQLYVLIPVCDNDKHYFVGSHEIEKLMEKGRGWLEDHPAKELIVRRYMKHLGPLTRQALNLIMKDEAAPEEVEDMPEPVEKVRLHDLRLQTVRDLLLEHQASSVADLGCGEGKLLRLLTEKSAFTRILGMDVSYRSLEIAGEKLKLDRMSDKQRKRLELIQGSLLYKDKRLSGFDAATLVEVIEHLDPPRLAALEKVVFEYARPSLVIITTVNGEYNIKYESLAAGTFRHNDHRFEWTRPEFEAWAATVAERFGYTVTFRPLGEWDDAVGAPSQLALFTIAAA
>NZ_CP051205.1|WP_168803636.1|2102706_2104002_-|O-acetylhomoserine-aminocarboxypropyltransferase/cysteine-synthase
MSRKLHFETLQVHAGYNPDPTTKSAAVPIYQTTSYTFDSAEHASDLFELKQFGNIYTRIMNPTTDVFEKRVAALEGGVGALAVASGQAAQFIALHNILLPGDNFVTSSYLYGGTYNQFKVSFKRIGVEARFADLDNPESFEKQIDENTKAIYVETIGNPGFAIPDFEKLSAIARKHDLPLVVDNTFGAAGYLCRPLEHGANVVVEAATKWIGGHGTSIGGIIVDGGNYNWGNGKFKQFSEPDDAYHGMKFWEVFGSHSPFGNIAYIIRARVTGLRSWGPALAPQNSFLFLQGLESLSLRVQRTVDNALQLAQWLQQQPQVEYVNYPGLPGNKYHGLAQKYLQNGFGGVLSFKIKGGKEAADKFVQSLQLIYHLANVGDSKTLIIHPATTTHSQLSEEEQRAAGVEPGLLRISLGVEHIDDIKEDIQQAFGA
>NZ_CP051205.1|WP_168803635.1|2100286_2102710_+|AsmA-family-protein
MRKWLKVVLIAGGSLVALIILLSVGLALYIKGNKAAFLKQITDQLNDNINGELSVEDMEPSLFRSFPNVSIALKKVVLRDSLWQQHHHALLDLDYVFVRVNTLSLLRKHVDVKEVSLEKGNIYLFTDSTGYTNTSALTASKPGKKKKASRDADIRNIGLSQITFTIDNRQKFKLFELDIQQMDGKLRSSDSGMHLDMRSSILARSFAFNTNKGSYLKNKTLGLDLSLFFNKITKQLIIPEQQIKIDQTPVRIAGVFDFSQKPPPFRLKINANQVLLQDAASWLSPNISGKLATIHLTAPLDAEANLEGRMKFRDTPRVVVTWKTTKNTLVTAAGEWNDCSFTGRFNNEVLPGAGHNDENSAVNIFGLRASLGEVPLEADTIRVVNLKHPLLRGHFRSQFPLAHLNTAASEVPILFSEGTAAADLYYTGPVLKDDNTPSALEGTVQVQRGGFTYLPRDLTFHDCSATLQFTGQDLLVRNVRIQSQKSALQMEGTIRNMLNLYFTAPEKIELDWKIRSALVDLNEFRSFLTARRKGKKAAHKKKARTESRVGQQLDKVLAASNVKMDVALDKIVFEHFTAQNVKALIAMTESDIQLNKIGFQHAGGTAQASGSVHQQGANNTFKINANISNVHIAQLFYAFSNFGMESLKSDNLRGIVSAKADIKGNVLDNGALAKHSLFGTVNFNLRNGALVNFGPLEDIGAFLFRRRRLDSITIENLSNTLQIQGSKIMIPPMRIASSAVNIDVNGVYGLAGGTNINLDVPLRNPAKDSAITDKAEKRRRSRKGIILHLHAVSGSDGKVKIKLGKGD
>NZ_CP051205.1|WP_078672615.1|2098347_2100141_+|elongation-factor-4
MKNIRNFCIIAHIDHGKSTLADRLLEFTKTISDRDMQAQVLDDMDLEREKGITIKSHAIQMNYTAKNGEKYTFNLIDTPGHVDFSYEVSRALAACEGALLLVDAAQGIQAQTISNLYLALENDLEIIPVINKIDMPGAMIEEVKDQIIELIGVKDEDILLASGKTGIGIEDILEAIVTRIPGPKGSLEAPLQALIFDSVFNSFRGIIAYFRVYNGSIKKGDKIKFVNTGEEYEADEVGILKLGLEPRKEVFAGDVGYIITGIKSAKEVKVGDTITLASRPCEEGIKGFQEVKPMVFAGIFPVVTEDFEELRECMDKLQLNDASLTYELETSQALGFGFRCGFLGMLHMEIIQERLEREFNQTVITTVPNVGFIAHTTREGVVIVNNPSEMPDPTKLERIEEPFIRAQIITKPEYIGNIMTLCLGKRGILLNQSYLTTTRVELMFELPLTEIVFDFYDKLKSQTRGYASFDYTPIGFRDSDIVKMDILLNGDKVDALSALIHRSRAQDFGRKLCEKLKDLLPRQQFLIAIQAAVGAKILARENISAMRKDVTAKCYGGDISRKRKLLEKQKEGKKRMRQIGNVEVPQEAFLAVLKLDD
>NZ_CP051205.1|WP_168803634.1|2097891_2098149_-|acyl-CoA-binding-protein
MDLTAQFEQAAAESKTLSEKPSNEILLQLYSLYKQGSTGDVDTDPPANPFDFVAKAKHEAWAALKGKSKEAAMQEYIDLVKRLKG
>NZ_CP051205.1|WP_168803641.1|2112409_2112733_+|hypothetical-protein
MNLWSLIVFIQQTVGAVAINSSLPCRIIQEQPYSRRLFVQMEAVEGEENLLLTISDNHHSPVRMIPIAPNSLPAGQLVCLTGLSAGEYIARVTVAGRVAEKKIEIRQ
>NZ_CP051205.1|WP_168803642.1|2112865_2114206_-|adenylosuccinate-lyase
MQLQPLTAISPLDGRYRKQLDELAGYFSEFALIRYRVMVEVEYFIALSEQKLFTLPKAKFASLRKIYQEFTIEHAQLIKDTEKITNHDVKAVEYFLKNELKNLGLEDKLEWVHFGLTSQDVNNTATPLLWKDAVEHVYMPALANLVLALRKLGESWMKVPMLARTHGQPASPTILGKEILVFVERLEGQIKLLGEIPFAAKFGGATGNFNAHTVAFPKINWEKFGEKFVNNTLGLQRMKYTTQIEHYDNIAAQFDALKRVNNILIDFCRDVWTYISMDYFKQKIKKNEVGSSAMPHKVNPIDFENAEGNLGIANAVFEHLSAKLPISRLQRDLTDSTVLRNVGVPFGHTLLATKSIQKGLDKLILNEAKLKEDLENNWAVVAEAIQTVLRRENYPQPYEALKELTRGGEHISQKSMHKFIDGLKISAALKKELKAITPHNYTGLWQ
>NZ_CP051205.1|WP_168803643.1|2114347_2115097_+|menaquinone-biosynthesis-protein
MERKVKVAAVSYLNTKPLLYGFRNHPVMEQMELSVDYPAKIAQQLIDGEVDVALVPVAIIPKLKEHHIIADYGIGAEGPVASVCLYSDVPLNEIKRIYLDYQSRTSVALLKILVKEHWKLEVELVPTTGDYEDKIKGTDAGLVIGDRALAQRKVSPFIFDLAEHWMRFTSLPFLFAAWISNKQLPEAFIQQFNDATSIGIKNIPAVVAENPYDLYDLTTYYVHNLSYPITPAKRQGMQKFLSYIRDLGI
>NZ_CP051205.1|WP_168803644.1|2115223_2115883_+|NAD(P)-binding-domain-containing-protein
MRIGILGSGPVGLTLGKGLIQTGHQITIGTRNPAREGVQQWIRQQGQQAAAGTFRQAAEFGELIIICTSWPGTKKAIEAAGIWNFKGKTVVDVTNPVDGKGPDEHGRLNLLIGHTNSAGEQIQAWLPPDAKVVKALSCIGYQHMLSPDFAEGSPTMFIAGNNAEAKQTVVDLLNEFGWKDVADMGHIEMSRSIEPLAVLWTAYGYLHNSSGHAFKLLKK
>NZ_CP051205.1|WP_168803645.1|2115965_2117615_-|M1-family-metallopeptidase
MRGITMFCMALLTAGTVSAQQQFTQADTLRGSITKERAWWDVTSYDLHVQVHLEDSTFSGFNTIAYKVLKPDTVMQIDLQVPMVIDSILQDRQSLAFTRNGNAWLVRMKSPQVKDKTKHLTVFYSGKPHKAKNAPWDGGVVWARDEQQRPWVATAVQHFGASAWWPNKDHQSDEPENMSIHVTVPAEMTDVSNGRLKKKTDNPDGTVTYTWYVSNPINNYDVAINVGHYSEIKDTYSGEGGKLDLSYWVLDYNVDKAKEHFKVVKPMLKCFEYWFGKYPFYKDSYKLVETPFLGMEHQSAVAYGNKFKMGYMGRDLSGTGWGLKWDFLIIHESGHEWFGNSITSKDIADMWIHESFTNYSETLFTQCQYSIKAGEEYVAGIRQIIKNDVPIIGPYGVNTEGSSDMYPKGANMIHNIRLIMNNDEAFRQMLRGLNKTFYHKTVTTQEVERFMSNAAGFDLGRVFDQYLRDTVIPTLEYRIIGQQVQYRWTNCVKDFNMPVRVKLSENGYKLIYPATSWRTASITLPDPNQFEVDKGFYIHVKKREATDNK
>NZ_CP051205.1|WP_168803646.1|2117660_2119304_+|ABC-transporter-substrate-binding-protein
MKSCYCQVVISVLCLLGLCSLLLGSCGQAESHHQQVFRYNQTEGISSLDPAFAKSQAVIWAVSQLYNTLVAPDTNLAIRPSLAKGWQVSDDHRTYTFDLRTDVYFHDSDIFPGGKGRRMTARDVVYSLQRITDPATASPGAWIFNGRIAADSGFRALNDSTFQLTLVRPFHPILGILSMQYCSVVPHEAVEKYGKDFRSHPCGTGPFKFFFWDEGQGLVFHRNPNYFERDAKGHRLPYLDAVQISFLDSKASEFLLFRQGQLDFINDIDASFKDEILTKQGTLKQEWSDKMVLDKKPFLNTEYLGFLVDSNNALVKNAPVRIRKIRQAINYGFDRTKMITYLRNGKGTPASAGFVPAGLPSFDIAKVKGYTYDPGKARQLLAEAGFPGGKGLPVIKLLSIPIYADMADYVANQLQEIGIRLQVEVVQKSLLLEQTAKSQALFFRGSWIADYPDAESYLAMFYSRNPAPPNYTRYANPAFDKLYEQALEENNDSLRYLLYQEMDRRIIADAPVVPLFYDQAMRLVQPHVSGLYNNGMNLLELRFVRKK
>NZ_CP051205.1|WP_168803647.1|2119406_2120180_+|acyl-CoA-desaturase
MTAILIFFCVHWFFSLFFHTFYLHRYASHQMYTTNKFWERFFYFCTWFFQGSSYLIPRAYGVMHRMHHEYSDTEKDPHSPHFFKDVWTMMVQTRKIYNGFVTRTSTVDAVFLEEPLPEWEAMDRFGDSNITRFAWMAIYVAFYVAFVPAGMWYLYLLLPIHFLMGPVQGAIVNWCGHKYGYSNFDNGDKSKNTSPWGIILLGELFQNNHHKFKDSPNFAKKWYELDPSYQVMKLFNVLGIIKLKPAMVTPAAMKKAA
>NZ_CP051205.1|WP_168811714.1|2120306_2121197_+|decaprenyl-phosphate-phosphoribosyltransferase
MMKYIKLLRPAHWAKNTFLFIPLFFAGEIFNVAKVLELLLAFMAFSITASSIYVINDYQDIEADRQHPVKCKRPLASGEISRPAGLIIFIGCLAVGGALAWMVGAKFAFVLGIYFLMNLFYSFGLKNISILDIIILAIGFVLRVKAGGIAGGIAISEWLMVMIFLLALFMAIAKRRDDVLIRLQSGQEMRKAARGYNPDFLNVMLSLVSAVIIVCYLMYTMAPETQVRFHTYRLYYTTLFVIGGLLRYLQITYVENNTGSPTKILYKDRFIQLTILLWVLSFYVLIYWPTNKVFFE
>NZ_CP051205.1|WP_168803648.1|2121196_2122525_+|FAD-binding-oxidoreductase
MQKRLANWGNYPAIISEESAYTQEEQLRSFVVAHHGFIARGNGRCYGDASLGKHSLSMLKYDKILSFDTVAGVLETQAGVTLDQILDIIVPKGWFLPVTPGTKFITVGGAVASDVHGKNHHMEGAFSGHITEMDVITGDGATITCSPSLHTDLYWATCGGMGLTGVITRVKFGLKKIETAYIKQKQIKARNLEEVIRLFDEYKHYTYSMAWIDCLQKGDSFGRSILIVGEHATKAELNPKQGQAPLQLPAKPRLTVPFNLPSFILNTFTVKAFNWMYYGKNFKKEINNVVPYEPFFYPLDAILHWNRGYGKAGFIQYQFVLPLEQKEGLVAILRRISEKGWGSFLAVLKVFGQQDSLISFPMEGYTLALDFPVRKGLFAFLDELDEIVLQYGGRLYLSKDARMKQEVFWKSYPNARRFAEIVNTYNPGKRFESLQSERLHII
>NZ_CP051205.1|WP_168803649.1|2122615_2123347_+|SDR-family-oxidoreductase
MPTVLLLGAGSDMAVAIARRFAAAQYNVQLAGRQPAALQPLQQDLQVRYGITATVHAFDATAYDTHAAFYAALSVQPDITVCAFGYLGDQEQAQENWAETARILDANFTGAVSILNVVANAYEAGKAGTIVGISSVAGERGRQSNYIYGSAKAGFTAYLSGLRNRLFRSGVHVMSVLPGFVNTAMTQHLTLPPLLTAQPELVANAVFKAVQRKKNVLFVKWPWKYIMLIIKLIPEFIFKKLRL

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Crispr_ID: NZ_CP051205_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_6

4012013-4012111

Orphan

Consensus_repeat	Method
ATTTATTTAAAAGTATCAATGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_6

>merge|NZ_CP051205|6|4012013-4012111|CRISPRCasFinder
ATTTATTTAAAAGTATCAATGTTTACCGGTAAAAAAATAGAGATGCCCGTCTCTATATCGTTCTACCGGATATTTATTTATTTAAAACTATCAATGTTT

>NZ_CP051205|6|6|4012013-4012111|CRISPRCasFinder
ATTTATTTAAAAGTATCAATGTTT	ACCGGTAAAAAAATAGAGATGCCCGTCTCTATATCGTTCTACCGGATATTT
ATTTATTTAAAACTATCAATGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168804931.1\|4008457_4009375_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP051205.1\|WP_168804941.1\|4015157_4016021_+\|NmrA-family-NAD(P)-binding-protein	unknown	unknown	gnl\|CDD\|187542
NZ_CP051205.1\|WP_168811817.1\|4016975_4017086_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP051205.1\|WP_168804919.1\|4002673_4003480_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	unknown	unknown	gnl\|CDD\|223640
NZ_CP051205.1\|WP_168804930.1\|4007976_4008456_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NZ_CP051205.1\|WP_168804940.1\|4014609_4015065_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168804938.1\|4013437_4014526_+\|alkene-reductase	unknown	unknown	gnl\|CDD\|239243
NZ_CP051205.1\|WP_168804928.1\|4007249_4007711_+\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_CP051205.1\|WP_168804935.1\|4011220_4011982_-\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|235816
NZ_CP051205.1\|WP_168804945.1\|4018186_4019221_+\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP051205.1\|WP_168804923.1\|4004134_4004575_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP051205.1\|WP_168804921.1\|4003505_4004066_-\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239516
NZ_CP051205.1\|WP_168811821.1\|4019231_4020479_+\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP051205.1\|WP_168804933.1\|4009601_4011032_+\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP051205.1\|WP_168811815.1\|4005604_4007017_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223154
NZ_CP051205.1\|WP_168804936.1\|4012472_4013351_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP051205.1\|WP_168804925.1\|4004700_4005612_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_CP051205.1\|WP_168804943.1\|4016026_4016956_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378964
NZ_CP051205.1\|WP_078668053.1\|4012135_4012405_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378968
NZ_CP051205.1\|WP_168811819.1\|4017118_4018009_-\|class-A-beta-lactamase,-subclass-A2	unknown	unknown	gnl\|CDD\|379138

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168804931.1\|4008457_4009375_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	4.23864e-48
NZ_CP051205.1\|WP_168804941.1\|4015157_4016021_+\|NmrA-family-NAD(P)-binding-protein	gnl\|CDD\|187542	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs. Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.10751e-40
NZ_CP051205.1\|WP_168811817.1\|4016975_4017086_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.50995e-08
NZ_CP051205.1\|WP_168804919.1\|4002673_4003480_-\|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB	gnl\|CDD\|223640	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis].	7.49114e-66
NZ_CP051205.1\|WP_168804930.1\|4007976_4008456_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	6.16279e-55
NZ_CP051205.1\|WP_168804945.1\|4018186_4019221_+\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	4.35384e-98
NZ_CP051205.1\|WP_168804938.1\|4013437_4014526_+\|alkene-reductase	gnl\|CDD\|239243	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include 12-oxophytodienoate reductase, pentaerythritol tetranitrate reductase, morphinone reductase, and related enzymes.	3.85377e-162
NZ_CP051205.1\|WP_168804928.1\|4007249_4007711_+\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.18621e-27
NZ_CP051205.1\|WP_168804935.1\|4011220_4011982_-\|glucose-1-dehydrogenase	gnl\|CDD\|235816	PRK06500, PRK06500, SDR family oxidoreductase.	4.72382e-96
NZ_CP051205.1\|WP_168811821.1\|4019231_4020479_+\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP051205.1\|WP_168804923.1\|4004134_4004575_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.00706e-15
NZ_CP051205.1\|WP_168804921.1\|4003505_4004066_-\|NUDIX-hydrolase	gnl\|CDD\|239516	cd03424, ADPRase_NUDT5, ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, for its activity. It also contains a highly conserved 23-residue Nudix motif (GX5EX7REUXEEXGU, where U = I, L or V) which functions as a metal binding site/catalytic site. In addition to the Nudix motif, there are additional conserved amino acid residues, distal from the signature sequence, that correlate with substrate specificity. In humans, there are four distinct ADPRase activities, three putative cytosolic enzymes (ADPRase-I, -II, and -Mn) and a single mitochondrial enzyme (ADPRase-m). Human ADPRase-II is also referred to as NUDT5. It lacks the N-terminal target sequence unique to mitochondrial ADPRase. The different cytosolic types are distinguished by their specificities for substrate and specific requirement for metal ions. NUDT5 forms a homodimer.	7.92325e-38
NZ_CP051205.1\|WP_168804933.1\|4009601_4011032_+\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	1.87299e-121
NZ_CP051205.1\|WP_168811815.1\|4005604_4007017_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|223154	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].	5.10706e-61
NZ_CP051205.1\|WP_168804936.1\|4012472_4013351_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	2.77214e-21
NZ_CP051205.1\|WP_168804925.1\|4004700_4005612_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	3.65718e-50
NZ_CP051205.1\|WP_168804943.1\|4016026_4016956_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378964	pfam12833, HTH_18, Helix-turn-helix domain.	1.13908e-20
NZ_CP051205.1\|WP_078668053.1\|4012135_4012405_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	4.32689e-10
NZ_CP051205.1\|WP_168811819.1\|4017118_4018009_-\|class-A-beta-lactamase,-subclass-A2	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.01605e-33

>NZ_CP051205.1|WP_168804935.1|4011220_4011982_-|glucose-1-dehydrogenase
MDQLRNKTAIITGGNSGIGYATATEFLAKGARVLITGRNPGAVQRAVHALGFPAEGLTADQSKLEDTKKLAEYVRSRYGKIDILFINAGIAKFAPFEGVTTEMFDEIIDINFKGAFFTAQQLLPLLNDGGSIVFLSAINAYAGMPGTTVLAASKAALNATARTLARELAPRKIRVNVINAGPVDTPLIEKIGVSHEEAGAIRSKMTASIPLGRLGEATEVASLVSFLVSDEARFITGGEYTIDGGLMVHPGIS
>NZ_CP051205.1|WP_168804933.1|4009601_4011032_+|PLP-dependent-aminotransferase-family-protein
MIKTADHLYLQVADKIEQMIEKDVMKMGEKLPSVRMLSKQQGISLTTAFQAYYHLEGKGLIESRPKSGYYICRNSRRMAPMPGTCAPVRKPASDVTVSDMVMEVFSHITNDNILKFSVAALPVSVLPAAKMAKAVIHTMRDQGPGGIGYEPLQGNELLRNQIARLSLGWGEVYTADDVVTTHGCMDALTLCLTATTQPGDTIALESPSYYGALQLAEGLGLKVLEVPTNPITGVDLDYLDKAIPRHKIKACLFVTNFNNPLGCCMPDKHKQELVKIVEKYDIALIEDDIYGDLYFGKQRPLTCKAFDTQGNVLLCNSLSKSVAPGYRVGWTMPGKYKEKVLRLKHHHAISCTSLTHAAAGHFLEIGRYDFHLRNLRKMLHTQSLRYAQAICEYFPESARVTRPQGGCVLWVELEDHVNTFELFQQTLKHKIAFCPGRLFSLQNRYNNCLRISYGNPWSKQVEDGLKTIGKLIHKMR
>NZ_CP051205.1|WP_168804931.1|4008457_4009375_-|DNA-3-methyladenine-glycosylase-2-family-protein
MIRQKIKIPVNDPANFSFRECLHFLGRSDKECLHYIVDGKLRRMLLAGGEPVVVEIASGDDAAYLEATVLAPGDMLFPEKDIQDFVTRWLHLDADLRDFYAYTQTDPLLRGLADEYRGLRLVGMPDLFEAVTWPIIGQQINLSFAYTLRQRLIHHFGYHQQVDGTDYYLYPHPAVIASLSPEALTPMQFSRSKALYLIETAKAMAAGQLSEQVLAPLDYAAARDRLVAMKGIGNWSANYTLMKYSRFPQAVLLEDVGLQNAVRQRLQLPAKPSMAALQEYARPWQQHAAYAIFYLWRSLLSPLND
>NZ_CP051205.1|WP_168804930.1|4007976_4008456_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MELAHLRIDTPVGPLLISGTDEYIQAVNFTEEPETAFPPPPQLLLQCAQQLQEYFAGDRKVFELPIRQPGTDFQQTVWEQLTRIPFGQTISYLQLAHRIGNPKSIRAVGTTNGKNQLAIIVPCHRVIGANGMLVGYAGGLWRKRWLLEHERLDLFSGLV
>NZ_CP051205.1|WP_168804928.1|4007249_4007711_+|IS200/IS605-family-transposase
MSHCFTQLHLQIVFAVKYRAALIAPGFRQDLYQYMAGIINNRSHSCLIINGISDHVHILVRMSPAESIASLTQTIKCNSSRWINDHQPLPRIFRWQEGYGAFSYSKSHVPKVVRYIENQEQHHRQRTFQEEYQNMINRYKNHTETPHPFLPLI
>NZ_CP051205.1|WP_168811815.1|4005604_4007017_-|aspartate-aminotransferase-family-protein
MKLQEDLKHTDRLLQLTKEFSSKFLSSLDRLAADKIIDMPVRQTLPEEGVGGVAALELFRQQYGNVITASAGPRYWGFVTGGVTPAALMGDWLAATMDLNASDKGSAAFAIETETIALLKQLFGLPEAFLGCFVTGATMANLTGLALGRQWLGQQRGIDIGRQGMAGLQDLQVVSCVPHSSITKSMAVLGLGRDNVVKIPALPGRESVDIEALRIYLESRKGQPVIYVASAGTVNTVDFDDIAAIVELKKQYAFWLHIDAAFGGFAACSEHHRHLLHGWEDADSITIDAHKWLNVPYDAAMIFSRHPGLQVEVFQNAGAAYLGDPAENFNYINYVPENSRRMRALPAWFTLLAYGKEGYRHIVEENVALAQRLGDLLEKDPAFRLLAPVRMCVACFTLNVPEEEQEAAVNRFLQALNASGVVCMTRTVYAGQPAVRAALVNWRTTANDVQLAYQTMKEVAVTVLNQHTYA
>NZ_CP051205.1|WP_168804925.1|4004700_4005612_-|EamA-family-transporter
MRKPSTNAYIALAIVSIFWGTTYLASRIGVRHIHGIMLAGLRQSTAGLLLTGFFLLKGYKLPEKIVLSKLFVMGLLMLVGSNGLMTWAMQYIPSGLGAVISATVPIWITIFSYFLVKKTRISIQLLVGMLLGFAGVAGIFYNYLSSLMNPDFRFGIMLSVFACICWALGSVLTAKWALGVNYLFGAGFQMLFSGIVMLLIATLFMGQQLDAGTFTTELWESLLYLILVGSILSYSAYVFTLNNLPPSLASVYAYINPIVAVLLGWVLLKENLTWLMGVCSLVTVGGVYLVNDAVNKNKQKQLQ
>NZ_CP051205.1|WP_168804923.1|4004134_4004575_-|GNAT-family-N-acetyltransferase
MEVVQATAMHTNEVAVLFDAYRSYFDQAPDFKGALAFISDRIKQQDSVIYIALDKDEIVGFAQLYPLFTSLGMKRGWLLNDVYVLDEHRGKGAGGALVDAAVEHGRKTDAAWVMLQTYVANTGAQKLYQSKGFRKDTNSFYYYLAI
>NZ_CP051205.1|WP_168804921.1|4003505_4004066_-|NUDIX-hydrolase
MTEYDNPWTIHSSEVRYDNNWIQVVHHEGLNPAGGPGIYGVVHFKNLAIGVIALDDQQNTYLVGQYRFPLKKFSWEIPEGGGPLGEVPLETAKRELLEETGLVANRWDVICELAVSNSVTDETGVVFLARELEQRTAEPEDTEELFVKKLPFEEVYQMVKNYDITDSISVVAIQKIKLMMLEGELD
>NZ_CP051205.1|WP_168804919.1|4002673_4003480_-|23S-rRNA-(guanosine(2251)-2'-O)-methyltransferase-RlmB
MERKFNAFKGERRPGGPKRPASPRPKQSSLIIGRQPVMEALSSGKPIERIYMLRSATGDIIPQIKEKAALGNIPVNVVPVEKLNGLTQANHQGVIALTGQVSYLDLQDVISHVIDQGETPLFLILDGITDVRNIGAIARSAVCCGAQAIIIPDKGIAALNEEAMKSSAGALEKIAICRVNSLLKAIDTLHLNGIKVLSSEMETEIKLYDCDLREPVAVIMGSEDKGVYPALIKASDVLFRIPMAGSFESFNVSVAAGIILYEAMKQRS
>NZ_CP051205.1|WP_078668053.1|4012135_4012405_-|helix-turn-helix-transcriptional-regulator
MDVGIIEKAANAIADKHRLSIIMEIAQKGSIVCGDVCCLCSLSQPTVSHHVKILVDSGVLNSVKNGRIVELTINKEMMKQLSLFFLQLS
>NZ_CP051205.1|WP_168804936.1|4012472_4013351_-|AraC-family-transcriptional-regulator
MGERNLHMPFELFEADMSEWESRPLVYYFFEIIHIWEGEGTRVVNQNRFPYKPGSVILFTPRDCRGFEVTKPTRFTSVRFSGSFLEKQHSGEERRRICQWLKQLEYVFFQHNRHEPVLIKHTDDCKMITSLIRNMVQEYQQRPPYYETNLQLYVALLLNIIARNVAEEVDMAEPEGEGPLIGRIISHIRQHIYYPDQLKLEVLAAKFNLSVNYIGEFFKKRTGESIQQFMISYKLKLVQLRMENSGLTIGEIADELGFTDESHLSRLFRKYYGVSPATYRRNELAEKAGTTA
>NZ_CP051205.1|WP_168804938.1|4013437_4014526_+|alkene-reductase
MKLLEPIATPGLSLANRVVMAPMSRRRVENEGVPSGLLARYYAQRASAGLIIAESTVVSRDGMGISLLPGIYSEEQVAGWRKVTEAVHRQGGKIFVQLVHSGRIGHALNIPGATGPVAPSAIAAAGTINTPAGAQPLPVPKALSAEAVEAMYELHMQATRNALAAGFDGVELHAAHGYLMEQFIHPAANQRTDEYGGSIENRCRLPLRVLEGMVAIAGADRIGVRFSPFASLNGLSPYEEEAATHLYLAAKLDKMKIRYIHLSDQSSNGYTPIPPAFITLLRQAFRQWLILAGGYNASTATQALQQFDADLIAFGRPFISNPDLVARIAQQQPFAPADKATFYEGGANGLIDYPCLSACATS
>NZ_CP051205.1|WP_168804940.1|4014609_4015065_+|hypothetical-protein
MYRLKNRCLLPVALLALMACHQTPDTPESTDAAPPAHTVVNVITEPCAVIYTPGTHKLEKLKEENGEESFYALSSDSENCISDCQDFLQNKAFKTTTADGGKITFRHQNGDTTVINLDDPQYTWEVFLFDGKKVTNIDITDIESEYDKVFI
>NZ_CP051205.1|WP_168804941.1|4015157_4016021_+|NmrA-family-NAD(P)-binding-protein
MKIVLTGSLGNISKPLTEILVKEGHQVTLISTDPAKRDKIEALGAQPAIGSIHDLPFLIRTFTGADVVYCMNPLDFATQDIREWDENMDRYSQAIKATGVKRAIVLSGWVAHLLQDLHPEKKFEALNDVSVTFVRPGPFYTNFYHLAGMIRYQGAITSNYGGDDVVAFVAPEDIAAAIAEEIGRPAMTGRKALYVVSDELTCTQAAQIIGEAIGVPGLQWTVTSGEAVKQGLQAHGVSPAVAGLMAEMQENMHNGKAQRDYALHQPVAGKRKLRDFAREYAVWYHQN
>NZ_CP051205.1|WP_168804943.1|4016026_4016956_+|AraC-family-transcriptional-regulator
MAGNLPLKIRSVQELLQLRGLPDTKHPLVSLINISALPHPPKPLDLSVTTDLYFIGISPSTQACLKMKYGQQAYDFDKGMMKFIAPGRVFSFNPDQAEEITLSGWLLLLHPDFLWNHPLGQKIKQYEFFDYAVNEALFLSDGEEKIINGLFQHIEQEYNNSIDKFSQGIIISLIESLLGYSERFYQRQFITREITHHGMVSQLETLLEKAFSPEMLKEQGVPTVKDISAQLNISPNYLSTLLKTLTGNSTQQHIQEKIIEKAKEKLMRTDLSVNEIAFELGFEYPQSFSKLFKTKTQLSPLEFRKSGRF
>NZ_CP051205.1|WP_168811817.1|4016975_4017086_-|HAMP-domain-containing-histidine-kinase
MGLSLALKIVRLHKGNISVVSQSGHGTTFTAELPHV
>NZ_CP051205.1|WP_168811819.1|4017118_4018009_-|class-A-beta-lactamase,-subclass-A2
MRPLYSLAIVLLYPLVAVTQQKAPLSQQFETIARAAKGTVGVSALVLETGETAVLNSKMRFPMQSVYKFPIAMAVLQQVDKGKLKLDQPIRVLPSDYIPQQGHSPLRDEYPAGNVDVTVAELLRYNVAESDGSACDVLLRIIGGTSVADKYVHDLGIKNIRIALTEQVQVPNELMQYRNWSTPEAMTALFKKFYTGHVLSDSSYNFLLDLLINSGPGARRLKAQLPKGTVVAHKTGTSGTVNGLTRATNDAGIITLPDGHHLIITVFVKDAYADQETREKTIANTAKAAWDHFVQD
>NZ_CP051205.1|WP_168804945.1|4018186_4019221_+|glutamate-5-kinase
MSKPILVIKFGTASITHANGDLDETVIAGVARQVAELHGQYHIVLVSSGAVAAGKQYLKAYEGTISQRKAAAAIGNPLLLSKYSRYFAPYNIAVAQSLCERQHFSNRDQFLQLKRTYEELWASNIIPIANENDVVSSLELKFSDNDELATLIAVGFGASLLLFSTSVAGVLDREGKVVPQIDVIDKTALSLADKEKSALGLGGMVSKLTFARLATRMGIRVVIFGIRTDDGILNAIAGKTGTLCLPQACSMPARRKWLASGSLVTGRIQIDAGAQQALEKRHSLLAVGVKEVQEKFECGEVIEIVNEENIAIAVGRARISSDILETNQKAQNTEVAHADDIVLL
>NZ_CP051205.1|WP_168811821.1|4019231_4020479_+|glutamate-5-semialdehyde-dehydrogenase
MMTIQPLLEKARQATASIRTLPDAQKQALLQALSRTLTENIPAITAENQKDLDAMPDDDPKKDRLLLNAPRIRSLAASLLDIARLPDPANQLLLENQLDNGLLIQKKTVPLGVVGVIYESRPNVTVDVAALCIRSGNVCVLRGGSDAIHTNTFLVSLIQDTLRAFHADENAVQLLPVDRALVTEMLTAAQYIDIIIPRGSQQLIDFVRQHSRVPVIETGAGVCHTYVERSANLEQAAAIVTNAKVSRPSVCNALDTVLIDEPVASGFIALLAPQLAAHNVDIYADPAAYALLEAQQYPHLHPAAPEDFGREFLSLKCSIKIVPDTKAALAHIQAFSSRHSEAIISRDPIVSEQFLNAVDAAAVYVNASTRFTDGGVFGLGAEIGISTQKLHARGPFALEKLVTEKWFVYGSGQTR

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Crispr_ID: NZ_CP051205_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_7

5595308-5595388

Orphan

Consensus_repeat	Method
ATCTCCGCTGCTTTTTAAATATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_7

>merge|NZ_CP051205|7|5595308-5595388|CRISPRCasFinder
ATCTCCGCTGCTTTTTAAATATCCAAATATCAAAATACCAAAATCAAAAAATGATCTGATCTCCGCTGCATTTTAAATATC

>NZ_CP051205|7|7|5595308-5595388|CRISPRCasFinder
ATCTCCGCTGCTTTTTAAATATC	CAAATATCAAAATACCAAAATCAAAAAATGATCTG
ATCTCCGCTGCATTTTAAATATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168807173.1\|5595411_5596830_-\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_CP051205.1\|WP_078666859.1\|5590998_5592048_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP051205.1\|WP_168807190.1\|5600272_5600761_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP051205.1\|WP_168807163.1\|5589051_5590035_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP051205.1\|WP_168807161.1\|5588288_5588996_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NZ_CP051205.1\|WP_168807194.1\|5601498_5602407_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235124
NZ_CP051205.1\|WP_168807171.1\|5594775_5595222_+\|type-I-restriction-enzyme-HsdR-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|372640
NZ_CP051205.1\|WP_168807157.1\|5585848_5586424_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP051205.1\|WP_078666863.1\|5587117_5588074_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP051205.1\|WP_168807159.1\|5586489_5587080_-\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|235534
NZ_CP051205.1\|WP_168807169.1\|5593919_5594690_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|235940
NZ_CP051205.1\|WP_168807196.1\|5602376_5603636_-\|3-deoxy-D-manno-octulosonic-acid-transferase	unknown	unknown	gnl\|CDD\|235589
NZ_CP051205.1\|WP_168807188.1\|5598726_5600217_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|227111
NZ_CP051205.1\|WP_168807165.1\|5590189_5590870_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP051205.1\|WP_168807198.1\|5603746_5604886_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP051205.1\|WP_168807184.1\|5597100_5597763_-\|cytochrome-c-biogenesis-protein-CcsA	unknown	unknown	gnl\|CDD\|307628
NZ_CP051205.1\|WP_168807175.1\|5596870_5597104_-\|CcmD-family-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168807192.1\|5600839_5601409_-\|thymidine-kinase	unknown	unknown	gnl\|CDD\|235272
NZ_CP051205.1\|WP_168807167.1\|5592150_5593899_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224048
NZ_CP051205.1\|WP_168807186.1\|5597908_5598571_-\|cytochrome-C-biogenesis-protein	unknown	unknown	gnl\|CDD\|225260

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168807173.1\|5595411_5596830_-\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	1.3021e-132
NZ_CP051205.1\|WP_078666859.1\|5590998_5592048_-\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP051205.1\|WP_168807163.1\|5589051_5590035_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.93017e-43
NZ_CP051205.1\|WP_168807161.1\|5588288_5588996_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	4.26147e-78
NZ_CP051205.1\|WP_168807194.1\|5601498_5602407_+\|hypothetical-protein	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	1.07459e-08
NZ_CP051205.1\|WP_168807171.1\|5594775_5595222_+\|type-I-restriction-enzyme-HsdR-N-terminal-domain-containing-protein	gnl\|CDD\|372640	pfam13588, HSDR_N_2, Type I restriction enzyme R protein N-terminus (HSDR_N). This family consists of a number of N terminal regions found in type I restriction enzyme R (HSDR) proteins. Restriction and modification (R/M) systems are found in a wide variety of prokaryotes and are thought to protect the host bacterium from the uptake of foreign DNA. Type I restriction and modification systems are encoded by three genes: hsdR, hsdM, and hsdS. The three polypeptides, HsdR, HsdM, and HsdS, often assemble to give an enzyme (R2M2S1) that modifies hemimethylated DNA and restricts unmethylated DNA.	1.42429e-46
NZ_CP051205.1\|WP_168807157.1\|5585848_5586424_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	2.68088e-87
NZ_CP051205.1\|WP_078666863.1\|5587117_5588074_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP051205.1\|WP_168807159.1\|5586489_5587080_-\|50S-ribosomal-protein-L25	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	1.43688e-57
NZ_CP051205.1\|WP_168807169.1\|5593919_5594690_-\|AMP-nucleosidase	gnl\|CDD\|235940	PRK07115, PRK07115, AMP nucleosidase; Provisional.	0
NZ_CP051205.1\|WP_168807196.1\|5602376_5603636_-\|3-deoxy-D-manno-octulosonic-acid-transferase	gnl\|CDD\|235589	PRK05749, PRK05749, 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed.	2.15964e-59
NZ_CP051205.1\|WP_168807188.1\|5598726_5600217_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|227111	COG4770, COG4770, Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid metabolism].	0
NZ_CP051205.1\|WP_168807165.1\|5590189_5590870_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	1.19373e-92
NZ_CP051205.1\|WP_168807198.1\|5603746_5604886_+\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	4.24359e-157
NZ_CP051205.1\|WP_168807184.1\|5597100_5597763_-\|cytochrome-c-biogenesis-protein-CcsA	gnl\|CDD\|307628	pfam01578, Cytochrom_C_asm, Cytochrome C assembly protein. This family consists of various proteins involved in cytochrome c assembly from mitochondria and bacteria; CycK from Rhizobium, CcmC from E. coli and Paracoccus denitrificans and orf240 from wheat mitochondria. The members of this family are probably integral membrane proteins with six predicted transmembrane helices. It has been proposed that members of this family comprise a membrane component of an ABC (ATP binding cassette) transporter complex. It is also proposed that this transporter is necessary for transport of some component needed for cytochrome c assembly. One member CycK contains a putative heme-binding motif, orf240 also contains a putative heme-binding motif and is a proposed ABC transporter with c-type heme as its proposed substrate. However it seems unlikely that all members of this family transport heme nor c-type apocytochromes because CcmC in the putative CcmABC transporter transports neither. CcmF forms a working module with CcmH and CcmI, CcmFHI, and itself is unlikely to bind haem directly.	7.37826e-11
NZ_CP051205.1\|WP_168807190.1\|5600272_5600761_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	3.36842e-12
NZ_CP051205.1\|WP_168807192.1\|5600839_5601409_-\|thymidine-kinase	gnl\|CDD\|235272	PRK04296, PRK04296, thymidine kinase; Provisional.	8.54678e-79
NZ_CP051205.1\|WP_168807167.1\|5592150_5593899_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224048	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only].	0
NZ_CP051205.1\|WP_168807186.1\|5597908_5598571_-\|cytochrome-C-biogenesis-protein	gnl\|CDD\|225260	COG2386, CcmB, ABC-type transport system involved in cytochrome c biogenesis, permease component [Posttranslational modification, protein turnover, chaperones].	0.000112303

>NZ_CP051205.1|WP_168807171.1|5594775_5595222_+|type-I-restriction-enzyme-HsdR-N-terminal-domain-containing-protein
MITINFPPPDFRISREQDKALIFDRYRKKFVRLTPEEWVRQNFLNYLVKTLGYPASLIGIEREIMLGELKKRFDIVVYNRRMEPWMLVECKEMNVPISQQTLEQIIRYHMVIPATYLVMTNGTHTFCCTHNVASKQWLFLTALPHFEI
>NZ_CP051205.1|WP_168807169.1|5593919_5594690_-|AMP-nucleosidase
MKTKEEIVANWLPRYTGEKLDRFGSHILLTNFSNYLTMFAEWNNVEVIGAGKPMQCATAGDITIINFGMGSPGAATVMDLLSAIHPKAVLFLGKCGGLKKKNAIGDLILPIAAIRGEGTSNDYFPPEVPALPAFALQKAISTTIRELGYDYWTGTCYTTNRRVWEHDAEFKQYLERVRAMAVDMETATIFSVGFFNKIPTGALLLVSDQPMVPEGVKTEESDKKVTTKFVERHLQIGIESLQKLIDSHQTVKHLRF
>NZ_CP051205.1|WP_168807167.1|5592150_5593899_-|ABC-transporter-ATP-binding-protein
MHATRLEIQDMEVTFHAHDTTVRAVNHLNLSVGRGEIIGVVGESGSGKSVTSLSVMRLIQAPGKISHGKILYHHANGQVTDLVQLSETAMRAYRGNEIAMIFQEPMTSLNPLHTCGAQVTEAIRLHKGISLKEAREQAKALFARVKLPDPAVIMDRYPHELSGGQKQRVMIAMAISCEPRLLIADEPTTALDVTVQKAILELLKELQQQMDMSVLFITHDLGVVAELAERVVVMYKGNIVEQGPVQQVFLHPQHPYTKGLLACRPPLDRRLSRLPVTRDFMETDAQGNIQEKAGAVAEVVNRLVISDGELKARQAKLAASPPLLEVHGLQTWFPVKKSITGKVLQWYKAVDDVSFTVVQGETLGLVGESGCGKTTLGRSLLRLIEPTGGSIVYKGQDLRSLSPAGMRALRKDMQLIFQDPYASLNPRKSVGAAILEPMQVHGLYGNERRQREKVLELLEKVNLSPEHFNRYPHEFSGGQRQRVVIARALAVDPSFIICDESVAALDVSVQAQVLNLLIRLREEFGFSCIFISHDLSVVRFISDRMMVMQKGRMVETGPADEVYGHPQHPYTRQLIAAIPKGL
>NZ_CP051205.1|WP_078666859.1|5590998_5592048_-|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MKLSQFKFDLPLNLIAQHPSKTRDESRLMVVNRTTGKIEHKVFKDILGYFNDKDVMIVNNTKVFPARLYGRKEKTGAKIEVFLLRELNKQNRLWDVIVDPARKIRVGNKLYFGDDESLVAEVIDNTTSRGRTIRFLFEGNDEEFKQVLDTLGETPLPKYIKRKPEEEDKERYQTVYAKYEGAVAAPTAGLHFSRELIKRLEIKGVKFAEVTLHTGLGTFRPIEVEDLSKHKMDAEYFHIEEHAVKVVNKAKEENRRICAIGTTSVRAVESSVTAQNHLKAAEGWTNTFIHPPYDFAIPNALVTNFHLPKTSLLIMVCAFAGYDLIMEAYQQAIKEKYRFFSYGDAMLII
>NZ_CP051205.1|WP_168807165.1|5590189_5590870_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MGNRKKTAIIVAGGSGSRMQSAIPKQFMDLAGKPVLYHTIAAFTTAYPEMEIVLVLPEQHISYANNLLQAFDNIPAITLVKGGETRFHSVKNGLQQVQGDAVVFVHDGVRPLVSPALVRTCYEATLSHGSAIPVIDMKDSIREVTGEQNRAVDRERFRIIQTPQTFLSELILPAFELPYDPLFTDEATVVERLGHPVHLVQGEESNLKITKPLDLVMAKAFLDLRG
>NZ_CP051205.1|WP_168807163.1|5589051_5590035_+|Gfo/Idh/MocA-family-oxidoreductase
MLKIGIFGVGHLGKIHLSQLSTMKDVEVTGFYDPSDANAASVAEQYNIPRYTTAEELILAVDAIDIVAPTTLHYKLCELAIRNGKHIFVEKPMTNTMEEAKTLVKLVDEANIKFQVGHVERFNPAFLALKGYDLKPMFIEVHRLAEFNPRGTDVSVILDLMIHDIDIVLSIVKSTVSRISASGVAVMSDTPDIANVRIEFHNGCVANLTSSRISLKKMRKMRLFQKDAYIGIDFLDKKSEIIKLKTPEDEGLFTLDIETNSGKKTIAIDNPEVKQSNAIRMELELFRDAILHNKPVAVNAIDGLQALDVAHQILQKINKSLNETAKA
>NZ_CP051205.1|WP_168807161.1|5588288_5588996_+|DNA-repair-protein-RadC
MFVSPKPQPHVAIRQWADAEKPREKLLQHGAGTLTDTELLAILLHTGHKNKSALDLAREVLQLAHHNLPELGRISVRKLQKLKGMGRAKAVTVLAAMELARRRQASPIHKKTVIRAGADAALFFKPLLADHSFETFYVMFLNHANKVLQYRCVSTGGMTSTVVDTRLIFRDALEAGACKLLLCHNHPSGSLRPSQADIRITLKIKEQGQLFDIDVLDHIIVSETGYCSLVEEGMI
>NZ_CP051205.1|WP_078666863.1|5587117_5588074_-|ribose-phosphate-pyrophosphokinase
MQPSVKIFTGNSNPALAEKIAKRYGNGLNSLGKLKIQKFSDGEFQPVFLESIRGDYVFLVQGTNAPSDNLMELLLMIDAAKRASAGYITAVIPYFGFARQDRKDKPRVAIGSKLVANLLTSAGANRVITMDLHAPQIQAFFDIPVDHLDSSAIFIPYIEQLKLENLTFASPDVGSTNRVREVASYFNAEMVICDKHRKRANEIASMVVIGDVKDRDIVLIDDICDTAGTLSKAANLLKEKGARSVRAFCTHPVFSGKAYENIENSVLEEIVVCDTIPIRPESSKIKVVSVADLFAVAIRNMHENKSITSLFVHSHRKQ
>NZ_CP051205.1|WP_168807159.1|5586489_5587080_-|50S-ribosomal-protein-L25
MKTITIEGQLRSEFGKKATRQIRSEEKVPCVIYGGAETVNFSAPAKAFKNLVYTSAFQIAEIKLGAKTYKCVLKDMQFDVVTDELAHIDFMELVEDKKVSVTLPIKLVGSSVGVKAGGKLVSKLKALKVKALPKDLVESIEVNIENLELNGNIRVEDVKVDGIEITNSPRIPIASVVMTRQLRQEESAAEKESKKK
>NZ_CP051205.1|WP_168807157.1|5585848_5586424_-|aminoacyl-tRNA-hydrolase
MKYLIAGLGNIGQEYRHTRHNIGFDVADAFVAKHNGSFDNDRLAEVAECKWKGKTFIVIKPTTYMNLSGRAVKYWMDKEKIALENLLVIMDELALPLDVLRLRPGGSDAGHNGLKSIQESLGTNQYPRLRFGIGNDYAKGRQADFVLGKWKPAEVAVVQQKINACCDIIESFAGIGLARTMNEYNKMTFPL
>NZ_CP051205.1|WP_168807173.1|5595411_5596830_-|Glu/Leu/Phe/Val-dehydrogenase
MSQDQHYSFFQSVERSFDKAAVFTKWDKGILEQIKACNAVYQIKFPVRIGDGVQVIEAYRVQHSHHKLPCKGGIRFSDEVNQDEVMALASLMTYKCAIVNVPFGGAKGGIKINPRNYTPFQLEAITRRYTAELVKKNFIGPGTDVPAPDYGTGEREMSWILDTYMSLRPGEIDGYGCVTGKPVSQGGVRGRTEATGLGVFYGLRELCNIKEDMERLGLSTGLEGKRVVVQGMGNVGYHAAKYFHEAGAKVICLIEWDGAIFNENGLDPDAVLKHKKETGSIINFPGSANLNKNTDGLELECEILIPAALENVIDKHNAPNVKAKIIGEAANGPLTPEADEILNKKGVIVVPDMFLNAGGVTVSYFEWLKNLSHVRYGRLGKRFDENMNIHILQTIEDLTGKKVSDKERKFIAHGADEVDLVYSGLEETMHAALHEVRDVMMANPQIHDMRTAAYVVAINKVGAAYEQLGIFP
>NZ_CP051205.1|WP_168807175.1|5596870_5597104_-|CcmD-family-protein
MINKAFSFCLTLTLLLVSVLANAQQQDTEKGALNEFFRSNDKIYVIVGVLVIIFLGIVLFLINLDRKISKLEQRDKK
>NZ_CP051205.1|WP_168807184.1|5597100_5597763_-|cytochrome-c-biogenesis-protein-CcsA
MARHWWKALAILLLIYVIIAGFTIRIPIIGTNGQSSRGLFFHVPMWICMYTMFTISVVNSLLYLSKYDLKRDVYASSAARVGAFFGVLGFATGSLWATYTWGGTLTDDPKQICTAIAILIYMAYLVLRISIHDIDKRARISAVFNIFAFALLIPLTYIIPRMVDSLHPGSASTPGFASKDTDGGMKLVLYPAFIGWTLLSVWIYSLLVRYKKLELKNIFK
>NZ_CP051205.1|WP_168807186.1|5597908_5598571_-|cytochrome-C-biogenesis-protein
MKSAIHQIYTLVRKDLVLELRQQYAFYGVLLYIISTVFVINLMMGKPDDKLWNALFWVIQLFVAVNAIAKSFMQENRGRLLYFYSLVPPRVFIAAKLIYNVILMTLMSLIALVCSFTFLGNPLHNTGYFVGIVLLGGTSLSLLFTVLAAIAAQANHNAALMAVMGFPLMMPMLMLLANVSLSAFVTVYQPGLPKMFLLLGGMDLLTIALTMVLFPFLWKD
>NZ_CP051205.1|WP_168807188.1|5598726_5600217_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MKKILVANRGEIALRIMRSAREMGIKTVAVYSEADRTMPFVQYADEAVCIGPAPSSQSYLLGEKIIAVAKERGADGIHPGYGFLSENARFAQLVADAGITFIGPAAASIETMGSKLAAKQAAQKFGVPMVPGTETPLRSVEEAREVVKKTGFPILIKASAGGGGKGMRVVNAPEELEEQIRLAKSEALSAFGDDAVFIEKYVGAPRHIEIQILGDQHGNCVYLFERECSIQRRHQKLIEEAPSSVLTPAIRAAMGKCAVDVAKACNYYGAGTVEFLVDEQLNFYFLEMNTRLQVEHPVTELITGLDLVKEQIKVARGEKLSFSQEDLTINGHAIELRICAEDPANNFLPDTGRLETYIRPQGYGVRVDDGYEQGMDIPIFYDPMIAKLIAWGSTREEARHRLIRAIEEYQVKGIRTTLPFGHWALQQPAFIEGRFDTNFINKYYTPQALLAERPEIDKLAAVLAAQVWQQQTVALQSATGYEKQPPSAWKKRNMLR
>NZ_CP051205.1|WP_168807190.1|5600272_5600761_+|GtrA-family-protein
MLRRIILHIIDFFYQPFARVMPRQTFRYLACGGGNTAMDILLYFICYNFVLQKEMIHLPFIDISAHIAALFMSMAVTFPTGFLLSKYVVFSESNLRGRVQLFRYFLLVGICILLNYFLMKLFVDRLHFYPTIGKIFTTALVVIFSYLTQKKFTFKVKQQSAG
>NZ_CP051205.1|WP_168807192.1|5600839_5601409_-|thymidine-kinase
MFIEPSLAGGRRGWIEVICGSMFSGKTEELIRRLKRARIANLKVEIFKPVIDTRYDEGSIVSHDENKIVSTPIDNSQQMLLLAQDVDVVGIDEAQFFDAELPNVCDKLALQGIRVIVAGLDMDYTGKPFGQMPFMLAKADYITKLHAICVCCGNIANYSYRKSAETETLLLGEKDLYEPRCRHCYYEVK
>NZ_CP051205.1|WP_168807194.1|5601498_5602407_+|hypothetical-protein
MEKINALIEKLQELKNSGADLQAISYYVQLLQAEVLYVRNKQQQQEMQNRQDIAVIMPVQPPMSVPVTTAAQTTTLPADKPEVPAAGYPQSAVTADPVPSKPEPVITAQPIPTLAASMPPPAAREPLPEPASREVPAREKEKEKAPPPATLFDQAPEPEPVPAPAPAPTPAPSPVQTQAKAHAVPDTHGIRKDLNELVGNHSGLSLNDRLRQQQTEVAQKLGDMPVKDLRAAIGINDKYQFIQELFRGDTDLYERSVKTINEFNSLQEADYWIQREIKIIQGWQDDHHLVKHFYSLLRKRFS
>NZ_CP051205.1|WP_168807196.1|5602376_5603636_-|3-deoxy-D-manno-octulosonic-acid-transferase
MLARAIYDTGIRLYRAGVGLAAMGGKKKASLWLDGRQHWRSRMEQAGMGRHPLIWVHAASLGEFEQGRPVLEALRRQYPGYKILLTFFSPSGYEVRKDYPGADYIYYLPLDTRRNARDFISIARPALALFIKYEFWYHFLTELYTRKIPVLLVSGIFRENQLFFKGYGGMFRRLLQQLTHIFVQNESSLRLLQGIGIRTASISGDTRFDRVAALLKEQAALPLVAQLAGNSHLLVAGSTWPEDEQLLASWWRQTTRPGMKMIIAPHEIHESHIRQVQALFPEAVTYSALKAGAPPADVLIIDNIGMLTTLYRYAYVAYVGGGFGKDGIHNLLEPAVYSKPVIIGPEYSKYFEAVELVALKGALVVSGLTNLEDYMQRLLNEPAFYEETASIAGNYVKDNKGATEKILQYIQENRFLNRE
>NZ_CP051205.1|WP_168807198.1|5603746_5604886_+|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MVPIQMVDLKRQYTKIKPQVDAAIQEVLESAAFINGGAVQKFAEELQQYLDIKHVIPCANGTDALQIAMMALDLQPGDEVITPSFTFIATAEVIALLQLKPVFVDVDPQTYCLDVAAVEKAITPKTKAIVPVHLYGHVADMEPLMAVAAKHNLYVIEDNAQAIGGNYTFADGSVKKAGTIGHIGCTSFFPSKNLGCYGDGGALFTNDDALAAKIRMVANHGQSARYYHDVVGVNSRLDSVQAAVLRIKLPLLDEYINARRAVADAYDAAFADMPQITTPYRAPNSYHVFHQYTLQLNGADRNKLQEYLATKQVPAMIYYPVPAHRQKMFEHFGGAAFDLPVTDNLTTRVISLPIHTEMDKDQLDHIIHSIKSFLNNSPA

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Crispr_ID: NZ_CP051205_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051205_8

6589999-6590102

Orphan

Consensus_repeat	Method
AAATCGAAAAATCGTAAATCAAAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051205_8

>merge|NZ_CP051205|8|6589999-6590102|CRISPRCasFinder
AAATCGAAAAATCGTAAATCAAAAAAAAGTCCCCGACAAATGATTTATCGTTGATTTCAGGTAAGCCAGGCAGCCTCCAAATCAAAAAATCGTAAATCAAAAAA

>NZ_CP051205|8|8|6589999-6590102|CRISPRCasFinder
AAATCGAAAAATCGTAAATCAAAAAA	AAGTCCCCGACAAATGATTTATCGTTGATTTCAGGTAAGCCAGGCAGCCTCC
AAATCAAAAAATCGTAAATCAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051205.1\|WP_168808575.1\|6579536_6580997_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987
NZ_CP051205.1\|WP_078670335.1\|6588201_6588888_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP051205.1\|WP_168808589.1\|6591054_6592032_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187539
NZ_CP051205.1\|WP_168808570.1\|6578221_6578848_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168808599.1\|6596760_6598149_-\|cytochrome-c-oxidase-accessory-protein-CcoG	unknown	unknown	gnl\|CDD\|274278
NZ_CP051205.1\|WP_168812062.1\|6594217_6595579_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236430
NZ_CP051205.1\|WP_168808595.1\|6595581_6596289_-\|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl\|CDD\|372587
NZ_CP051205.1\|WP_168808597.1\|6596295_6596733_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377555
NZ_CP051205.1\|WP_168808585.1\|6588912_6589941_+\|phenylalanine--tRNA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|234780
NZ_CP051205.1\|WP_168808601.1\|6598153_6599230_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|129864
NZ_CP051205.1\|WP_168808587.1\|6590115_6590964_+\|3-hydroxybutyryl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236211
NZ_CP051205.1\|WP_168808581.1\|6585629_6586436_-\|GLPGLI-family-protein	unknown	unknown	gnl\|CDD\|273495
NZ_CP051205.1\|WP_168808577.1\|6581255_6582152_-\|TIM-barrel-protein	unknown	unknown	gnl\|CDD\|226149
NZ_CP051205.1\|WP_168808583.1\|6586626_6588066_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP051205.1\|WP_168808593.1\|6592811_6593756_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	unknown	unknown	gnl\|CDD\|234858
NZ_CP051205.1\|WP_168808591.1\|6592036_6592720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_078669638.1\|6582352_6582637_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051205.1\|WP_168808603.1\|6599239_6599419_-\|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone	unknown	unknown	unknown
NZ_CP051205.1\|WP_168808572.1\|6578997_6579543_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP051205.1\|WP_168808579.1\|6582725_6585590_-\|outer-membrane-beta-barrel-protein	unknown	unknown	gnl\|CDD\|379720

Protein	Function_ID	Function_description	E-value
NZ_CP051205.1\|WP_168808575.1\|6579536_6580997_-\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	8.00222e-124
NZ_CP051205.1\|WP_078670335.1\|6588201_6588888_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	9.50641e-63
NZ_CP051205.1\|WP_168808589.1\|6591054_6592032_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187539	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs. This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.15188e-91
NZ_CP051205.1\|WP_168808601.1\|6598153_6599230_-\|c-type-cytochrome	gnl\|CDD\|129864	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III. This model describes a di-heme subunit of approximately 26 kDa of the cbb3 type copper and heme-containing cytochrome oxidase. [Energy metabolism, Electron transport].	4.06614e-27
NZ_CP051205.1\|WP_168808599.1\|6596760_6598149_-\|cytochrome-c-oxidase-accessory-protein-CcoG	gnl\|CDD\|274278	TIGR02745, iron-sulfur_cluster-binding_protein, cytochrome c oxidase accessory protein FixG. Member of this ferredoxin-like protein family are found exclusively in species with an operon encoding the cbb3 type of cytochrome c oxidase (cco-cbb3), and near the cco-cbb3 operon in about half the cases. The cco-cbb3 is found in a variety of proteobacteria and almost nowhere else, and is associated with oxygen use under microaerobic conditions. Some (but not all) of these proteobacteria are also nitrogen-fixing, hence the gene symbol fixG. FixG was shown essential for functional cco-cbb3 expression in Bradyrhizobium japonicum.	1.00849e-136
NZ_CP051205.1\|WP_168812062.1\|6594217_6595579_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236430	PRK09249, PRK09249, coproporphyrinogen dehydrogenase.	0
NZ_CP051205.1\|WP_168808595.1\|6595581_6596289_-\|sulfite-exporter-TauE/SafE-family-protein	gnl\|CDD\|372587	pfam13386, DsbD_2, Cytochrome C biogenesis protein transmembrane region.	2.98668e-43
NZ_CP051205.1\|WP_168808597.1\|6596295_6596733_-\|hypothetical-protein	gnl\|CDD\|377555	pfam05751, FixH, FixH. This family consists of several Rhizobium FixH like proteins. It has been suggested that suggested that the four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG.	1.68679e-18
NZ_CP051205.1\|WP_168808585.1\|6588912_6589941_+\|phenylalanine--tRNA-ligase-subunit-alpha	gnl\|CDD\|234780	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated.	0
NZ_CP051205.1\|WP_168808587.1\|6590115_6590964_+\|3-hydroxybutyryl-CoA-dehydrogenase	gnl\|CDD\|236211	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated.	6.12073e-135
NZ_CP051205.1\|WP_168808581.1\|6585629_6586436_-\|GLPGLI-family-protein	gnl\|CDD\|273495	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein. This protein family was first noted as a paralogous set in Porphyromonas gingivalis, but it is more widely distributed among the Bacteroidetes. The protein family is now renamed GLPGLI after its best-conserved motif.	1.48254e-15
NZ_CP051205.1\|WP_168808577.1\|6581255_6582152_-\|TIM-barrel-protein	gnl\|CDD\|226149	COG3622, Hfi, Hydroxypyruvate isomerase [Carbohydrate transport and metabolism].	1.0725e-27
NZ_CP051205.1\|WP_168808583.1\|6586626_6588066_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	5.44343e-47
NZ_CP051205.1\|WP_168808593.1\|6592811_6593756_-\|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase	gnl\|CDD\|234858	PRK00892, lpxD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional.	4.54888e-102
NZ_CP051205.1\|WP_168808572.1\|6578997_6579543_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	3.8287e-30
NZ_CP051205.1\|WP_168808579.1\|6582725_6585590_-\|outer-membrane-beta-barrel-protein	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	2.39222e-28

>NZ_CP051205.1|WP_168808585.1|6588912_6589941_+|phenylalanine--tRNA-ligase-subunit-alpha
MEQLVQQIAAYKQEIAAFTPANAADLEQYRIKFLGTKGIVKALFGEMKQVPNDRKKEFGQILNEFKQLAEERYEAFAALKEAAGANHQEIDYTMPEAPHRLGTRHPISLVRNKIIRIFERLGFTIAEGPEIEDDWHNFTALNLPENHPARDMQDTFFVSKNPDWLLRTQTSSAQVRVMEQGKLPIRIISPGRVYRNETISARAHCFFHQVEGLYIDENVSFADLKQTLYHFVKEFFGENTGIRFRPSYFPFTEPSAEMDISCFICGGTGCSVCKQTGWVEILGCGMVHPKVLANCGIDPEKYTGFAFGMGIERITMLKYQIKDLRLFSENDTRFLEQFEGTV
>NZ_CP051205.1|WP_078670335.1|6588201_6588888_+|response-regulator-transcription-factor
MAKILLIEDEWQLGQIVKDSLETRGFEMLYAEDGKEGLRLYQQERPDVVVLDIMMPNMDGFTVTAEIRKQDKFTPIIFLTAKSQTADVVKGFELGGNDYLKKPFSMDELIVRIKALLKRFSDHPAVKEMEEGSVVIGQYIFNYAKQTLTRNNTTEFLSHREAEILRRLYDNKNEVMERKAVLMDLWGDDNFFNARSMDVFITKLRRYLKDDSRVQIVNIRGVGYKLIF
>NZ_CP051205.1|WP_168808583.1|6586626_6588066_+|HAMP-domain-containing-histidine-kinase
MRQRIRNILILMCSCILGIFLFQGYWVYNSYRIRQEQFSKEINDALRTAVFNKQFSDVHRQFPDMRSYRYYRAKDSARMVMLRINRHDGRHRHGPGDMPPGPLPPPDSIKGDVTARIYVDTLARQISEFLIAGNNRNDSANLRKLDSVFRAELHNRQIATPYQLDTFHMSYSGFERESFRDSIRKREPRQTSKIPFNPASNLFVQASFESPLQFILQKMLWTLVSSVALLVLTVLCFVYMLRTILKQKRLSEVKNDFINNMTHELKTPIATVSAAVEALQNFNALNDQRKTQTYLDISKNELQRLSDLVEKVLHIAAEEKEDFELFREETDLNEVIDNILTNHQLKATKVLQVRYDNKLTRPTVYVDKTHLSNAINNLVDNAIKYSGEQVQLYISCSEENGILKIRVRDNGIGIPRVYQENIFDKFFRVPTGDLHNVKGFGLGLSYVKKIVEMHGGTIRVHSEPDKGTEFTINIPLSRG
>NZ_CP051205.1|WP_168808581.1|6585629_6586436_-|GLPGLI-family-protein
MKGISRIIMSTALALPFSQPLLAQQSGTIVYEVTAKTDPERMRGFQRGGGDGDDAPQIPDVITFKQTLTFNNGHAKLATERPDFGNGGSRWGGRARRDTSNAPAQGPGPGQRRMGGMMGRGNTQYFDLANKKVIHVFSTFGEDRKTYYSEEDFIVAADTKTSEKTKKIAGYTCKKATVKLKDDTYTVWYTTELPFSFSPINGLLPEANAVVLVAEGGKRAFNASSVNLQAVTDTDLSIPAGAEKISQEQMRDIRQQEMEKLRKRQPQM
>NZ_CP051205.1|WP_168808579.1|6582725_6585590_-|outer-membrane-beta-barrel-protein
MKKIIQLLLVLSLGVICSQAQAQQGKIKGQLTDQSTREAMPAATVVLLHAKDSTVASTAITDNKGNFEITNIANGDYRLFISFLGYKAINKPVKITEETPSLTLGTLGMELKGVNLNAVEIKDEKPPIVVKKDTLEFNADAFKTRDNAVVEDLLKKLPGVTVDKDGAITAQGETVTKVYVDGKPFFGTDPKMATKNLPANIIDKVQIIDKKSDQAEFTKIDDGQTEKAINITIKKDKKKGLFGRASAGYGTDDRFSTAFNINRFRDNQQMSLIGGGNNINSTGYSVRDQMSFSPAGGGGGGGRGRGGRGGGGMIVTQGGGGGNANPGITRNWNAGLNFSEDFSKKVQFSGSYFFNDTKNNLAQQTSRQTFAGNSTTFYNENSASQTDNSNNRLDARVEYEIDSMHSLVFSPSYSLTNGNSFSSRDYQTLNNNKDTVNKGTTTNDGQGNNQNIGGSLLFRKRFKTPGRSLSLNLTYNTSINDQQNFNKSSVYYFANDSLSTFNQNNQINTTSKNAGANLTYTEPLGRDKYLEANYGFTNYKSDSKKYTYDYDEGKGIYDQLNDSLSNAFTNNTLNQQAGLAFRTTRLKYDYSIGLNVLFNNLDNTTYSFRTKRDSLIHQRTVNFAPNASFNYTFAKNKRLRINYNGNTQQPTVQQLQPVPDNSNALYVQEGNPDLKPSFNNTLRINYNQFNNTTFRGMFAMLRGSFGSNKIVNSTRLDTATGKTFSKPVNVNGYYSINGMLHNSIPLSRTPGQNLNTGTMIGYSRDVNMTQGVMNYKSTFQLTQSVNVSYMYKELFDAALGGSVNYNATSYTLPSTPNTQYFDYNFNADVNFNLPLGFMVGSDITCTLSRGRTAGYNLTSTMWNANISKYVFPKKQGMIRIQGFDLLRQYVAVSRDVSDNYIEDVRSNVLQQYFMVSFTYFLNKFGGNNKGNNAERGMRMMGPRGGQGGFRVNHF
>NZ_CP051205.1|WP_078669638.1|6582352_6582637_+|hypothetical-protein
MEKKYTPSLWLCILMDLIGCASYAVPVLGDVSDVIWAPISAIIFYRMFGGPVGTFGSAFNFLEELFPGTDFIPTFTVAWIVKRIWAGRRTVSMR
>NZ_CP051205.1|WP_168808577.1|6581255_6582152_-|TIM-barrel-protein
MHEENSRRDMIKKVATMALASTALSSLSERVAAHDKTVGEPLKGKINHSVCAWCYDDISLADLCVAAKKIGIPSIDLVDPKDFAVLKKHDMTCAMVASNGPEWGITRGFNNPAHHDKLETYFRHYIDETAKAGFSNLICFSGNRNGLSDEQGIANCTKGLQRIISYAEKKKVTLVMELLNSKVDHHDYQCDHTAWGVALCKSVGSENFKLLYDIYHMQIMEGDVIRNIRDHHQYIAHYHTGGVPGRHEIDETQELYYPAIMKAIHETGFKGYVAQEFIPSRPDKLASLNNAVHICDIA
>NZ_CP051205.1|WP_168808575.1|6579536_6580997_-|amino-acid-permease
MKQYYKKPLAWLLQESGEEGSHGLKRTLSGFQLVMLGLGVIIGAGLFSLTGLAAGNNAGPAVTISFVVAAVGCAFAGLCYAEFAAMIPVAGSAYTYAYTTMGEMLAWIIGWDLVLEFSVGAATVSISWSNYLVEFLAGYGIYLPPRLVHSPFETITLPGGEVVHGLFNLPAALVVILMSYILMRGTKGSAIWNAVVVSLKVGVVLVFIALGWKYVQPANLVPYIPKNTGELGHFGWSGILRGAGVVFFVFLGFDIVSTAAQETKNPKRNMPIGILGSLAICTVLFILFSHVMTGLAPYTEFKNSGAPVAIAISHTPFKWLGQLVVLAIIIGYTSVIMVDLWGQSRVFYSMSKDGLLPEIFSEIHPRFRTPWKSNILFCVFISIFAALVPIKVVGEMTSIGTLLAFVIVCAGVWILRYTMPDAPRPFKTPWVPFVPVMGILTCVGMMVFLPLDTWLRLIIWMAIGMVIYFCYGKKHSRVRRELNAGQ
>NZ_CP051205.1|WP_168808572.1|6578997_6579543_+|GNAT-family-N-acetyltransferase
MLDIPVNEDLYLRQLTMQDAPLVYKQLDASRKSLRKFLPWVDYNTNEEHSARFIQMMQRKAEEQEAIALGIWYQHHLCGVMDLHGWDHQVQKAEIGYWVGEAFQGKGIATAACRALITYAFKKLRLNKIEIRFVLQNERSGQIPIKLGFTREGILRHNAKLHGQYVDMVVMGVLRQDWKHY
>NZ_CP051205.1|WP_168808570.1|6578221_6578848_+|hypothetical-protein
MKKLGLILSGLVIMALAACSTKVTSSWRANNAQQLQKDQKIMVMALVPQKDRALRSQMEDFTVAEFRRKGYNAVSALQEFGPGEFMKMGEKQAVRKLQGSDVGQVLTIVMVDKGREKSYTPGYAYAPYGYWGFWPYYSRWYNTYYGPGYVTYSTRYQWEGNLYDLKSGQLLYSVQSQSFDPPSTARMAVLYAQQVVKDMTKRNLLAQN
>NZ_CP051205.1|WP_168808587.1|6590115_6590964_+|3-hydroxybutyryl-CoA-dehydrogenase
MIHSIAVCGAGTMGAGIAQVAASGGYKTVLFDIRPEGLERAQAQITKSLTTAVEKGRLKAEDKDAILERLTFTSDIHLCVADVIIEAIVEDMAAKTALFSQLAPINREDAIFVSNTSSLSVSQLAATLPHPQRVAGMHFFNPAHLMKLVEVVSGEQTSPEVAGRVYELARAMGKVPVRVKDAPGFIVNRVARHYYLEAMLLAEQRMADFSTIDQLLENAGFRMGPFALMDLIGNDINLAVTQSLYDAFQQAPRFRPNALQEQRVKDGRLGRKTGLGFYRYEQ
>NZ_CP051205.1|WP_168808589.1|6591054_6592032_+|NAD-dependent-epimerase/dehydratase-family-protein
MILVTGGTGFLGSYLIRSLVAAGKPVRALYRKAPSPRLQDLSGKIEWVQGDILDVCALEDAMQGVTQVYHCAAVVSFQPGHAAGLMKINVEGTANVVNLALDAGVKKLVYVSSVAAIGRAKEQAAIDEDCEWEDSPNNSRYSISKYQGEMEVWRGIAEGLDAVIVNPSIILGAGFWDEGSGTLLKNAWKEFPYYTEGVNGFVDVLDVVKAMVLLMDSPVSGERFILSAGNWGYRQLFTSMAHALGKKPPHIAAKPWMAELVWRLEKVKGLLTGKQPVVTKETARTAQLKVYYDNQKILKALPEFTFRPLEETIREISAAFLASRN
>NZ_CP051205.1|WP_168808591.1|6592036_6592720_-|hypothetical-protein
MKKLLFPFLFLLSCTTAKKSTTTPTVHNLYSQAQEWPVKVNDGWLTAKTISFGLYSTSSRKNGVAETMGSFVKDPKTPFNFYVNGNDEHILVQTMNTTRIAFSNRDLPAVLKDLDGSTALSYTLINGTKNEPLKRWEMILKSPGYLELNNNKQAGILRCADTDIRITAHNRYGKVNSYEKVCYEFQYRGQPVAAVIAGDKPRVWVSKDAPAETAKTLAAAIGALLLK
>NZ_CP051205.1|WP_168808593.1|6592811_6593756_-|UDP-3-O-(3-hydroxymyristoyl)glucosamine-N-acyltransferase
MKFEAPVAVTEIAAFIGAELVGNSQLMATGLNEIHKVTPGDISFVDFEKYYNASLQSAATIIIINKKVECPEGKALLVLEDPFSAYVKLVNRFRPFEPASKAVSDSAVIGEGTIVQPNVFIGNHVRIGRNCLIHPNVTIYDHAVIGDNVIIHAGTVLGADAFYFKKRADREVIYDKLVSCGRVIIEDDVEIGAGCTIDKGVSGDTIIGRGTKLDNMIHIGHGTVIGKNCLIAAQVGIAGKAHIEDNVILWGQVGVNKDLTIGKGAVVLAQSGVPSSLEGGKVYFGYPAEVASEKRRELGWVKRIPEIWDKVKSL
>NZ_CP051205.1|WP_168812062.1|6594217_6595579_-|oxygen-independent-coproporphyrinogen-III-oxidase
MMDLIRKYNIAAPRYTSYPTVPYWDENTFNLPAWKTLLKKAFQATNHKDGISIYIHLPFCEKLCTYCGCNKHITVNHAVETPYIQTVLKEWELYVAAFEGRPRIREIHLGGGTPTFFSPENLMMLLQGIYRHATLLPDASLSFEGHPGNTTPEHLQTLYDLGFRRVSLGIQDFDSRVQEIINRLQPFEMVEKVVEHARKIGFTAINFDLIYGLPLQTACGMQDTVSKVMLLRPDRISFYSYAHVPWIKGVGQRRYTEADLPKDEEKRRLYELGKKLFARNGYTEIGMDHFALPGDELFIAAEKGELHRNFMGYTVSHTSLLVGLGASSIGDNGYGYVQNEKQVAAYQERVAGGEFPIVRGHILSDEDQLLKGHIRDLMCTFETSWRKADTQCDAVIEGLQRLQELERDGLVEVVKNSVKVTAQGRPFIRNICMAFDARLWRKLPESQLFSKAI
>NZ_CP051205.1|WP_168808595.1|6595581_6596289_-|sulfite-exporter-TauE/SafE-family-protein
MIGALILGFLGSFHCIGMCGPIALTLPVQHLDGVKKLAGILLYNAGRITTYALLGMIFGWVGRQLYLGGLQQWLSIGIGVLLLLIVLLQYTGIYRSKGGHLPGIYLSKIKSALGALLRQQRFSTLYGIGVLNGLLPCGLVYLAVAGAVATGATWKGSLFMAAFGAGTMPAMMTVTWFSHLVSIGVRNRIRALIPVAVGIMGILLILRGLNLGIPYISPVMSAHSEKVVERCCHKP
>NZ_CP051205.1|WP_168808597.1|6596295_6596733_-|hypothetical-protein
MNWGHKIIIVFVVFAAGILTLVTKSMRTKIDMVTKDYYAEELKYQQVIDGKKNAGALSAPVLIAQQSEGIAVTFPQELHGANITGKIKFYRPSDAGMDVEMPLRLSSGGTLMINRQLFHKGNYLVKVQWENGGKPFYQEENLHIN
>NZ_CP051205.1|WP_168808599.1|6596760_6598149_-|cytochrome-c-oxidase-accessory-protein-CcoG
MADSNTFRDSLATVDKQGKRNWIFAQQPKGRYYNIRSILSIFYFSVFFSLPFISINGRPLFLLNVVEGKFILFGAIFWPQDFFIFGLAMLAFILFIVLFTMAFGRLFCGWMCPQTIFMEMLFRRIEYWIEGDAAAQRMLAKQPWNTDKIIRKTAKHLVFYALSFLIANIFLAYIISAKTLGNIITAPLSEHTGGFIAILVFSGVFYGVFAFMREQICTIVCPYGRLQGVLLDKNSILVAYDYVRGEPRGKFRKDDARAIGDCIDCAQCVKVCPTGIDIRNGTQLECVNCTACIDACDHMMDKTGRARGLIRYASENGIAQKAPLRFTPRLRIYTGILTLLLGAIVFMLASRKPVSGTIMRTTGMLYQERGADSISNLYRIKLINKTTAEIPLQLKLEDEPGHVEVVGKSTITVKAEGQGEGTFFIIVPKAALHNRKSTLYIGLYEGDKRITRMRTTFLGPVQ
>NZ_CP051205.1|WP_168808601.1|6598153_6599230_-|c-type-cytochrome
MKRKLLYTLSGSLLCSLSALAGGPKPPSELKDPVALVLLTVIIGLVLVIAILGNAVVGAMDLYRERMKREAAKLPVILVLVTLSLAASLPAGATSPAPEASSYYTSLSQSSLYLLVSIVVLEIAVIISLLFVLRFLAGIKNKSKRRAAADAATPAKPRISWLEKINKTRTLDAASETEEDMGHDFDGIRELNNPTPPWWKWGFIFSICFGVVYFWRTEISHSAPNQLQELAMAEEKAAVAKAEYLKNAANNIDENNVKMMDNADDLAAGGKIFVASCAPCHGPQGQGVVGPNLTDDYWMHGGKINEVFKTIKYGVPDKGMKAWQEDFSPKQLAQLASYVKSIHGSNPPNPKEPQGVKE
>NZ_CP051205.1|WP_168808603.1|6599239_6599419_-|CcoQ/FixQ-family-Cbb3-type-cytochrome-c-oxidase-assembly-chaperone
MKFINYLESIAGVSIYPMASLLIFSIFFVFAAFWAFRADRNMVDQISRIPLDNDETQSL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051205_5	5.1\|2112082\|30\|NZ_CP051205\|CRISPRCasFinder	2112082-2112111	30	NZ_CP054032	Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence	893084-893113	7	0.767
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	NZ_CP019367	Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence	8517-8546	8	0.733
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	NZ_CP015334	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpG27, complete sequence	9131-9160	8	0.733
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	KC139511	Salmonella phage FSL SP-101, partial genome	13208-13237	8	0.733
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	MN336265	Salmonella phage vB_SenS-EnJE6, complete genome	24133-24162	8	0.733
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	MN927225	Escherichia phage vB_EcoS_XY1, complete genome	9756-9785	8	0.733
NZ_CP051205_2	2.1\|617496\|30\|NZ_CP051205\|CRISPRCasFinder	617496-617525	30	KY626163	Salmonella phage SE40, complete genome	10782-10811	8	0.733
NZ_CP051205_7	7.1\|5595331\|35\|NZ_CP051205\|CRISPRCasFinder	5595331-5595365	35	NZ_CP017574	Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence	348149-348183	8	0.771
NZ_CP051205_5	5.1\|2112082\|30\|NZ_CP051205\|CRISPRCasFinder	2112082-2112111	30	MF996376	Escherichia phage SRT8, complete genome	41857-41886	9	0.7

1. spacer 5.1|2112082|30|NZ_CP051205|CRISPRCasFinder matches to NZ_CP054032 (Rhizobium sp. JKLM13E plasmid pPR13E01, complete sequence) position: , mismatch: 7, identity: 0.767

tgttacaatcccggattccgttggatggat	CRISPR spacer
tgttacagtcccggatttcgttgaggcgtt	Protospacer
*******.*********.*****..  * *

2. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to NZ_CP019367 (Borrelia turicatae 91E135 isolate Oz1 plasmid lpG29, complete sequence) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
tcaaatccggaaatcttttttgataaaatc	Protospacer
  ******* **************   .*

3. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to NZ_CP015334 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpG27, complete sequence) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
tcaaatccggaaatcttttttgataaaatc	Protospacer
  ******* **************   .*

4. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to KC139511 (Salmonella phage FSL SP-101, partial genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

5. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to MN336265 (Salmonella phage vB_SenS-EnJE6, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

6. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to MN927225 (Escherichia phage vB_EcoS_XY1, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttgggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

7. spacer 2.1|617496|30|NZ_CP051205|CRISPRCasFinder matches to KY626163 (Salmonella phage SE40, complete genome) position: , mismatch: 8, identity: 0.733

gaaaatccgtaaatcttttttgatctcgtg	CRISPR spacer
atacttaggtaaatcttttttcatctcgtc	Protospacer
. *  *  ************* *******

8. spacer 7.1|5595331|35|NZ_CP051205|CRISPRCasFinder matches to NZ_CP017574 (Bacillus thuringiensis strain SCG04-02 plasmid PSCG364, complete sequence) position: , mismatch: 8, identity: 0.771

caaatatcaaaataccaaaatcaaaaaatgatctg-	CRISPR spacer
tcaatatcaaattaccaaaatt-aaaaatggtacgt	Protospacer
. ********* *********. *******.* .*

9. spacer 5.1|2112082|30|NZ_CP051205|CRISPRCasFinder matches to MF996376 (Escherichia phage SRT8, complete genome) position: , mismatch: 9, identity: 0.7

tgttacaatcccggattccgttggatggat	CRISPR spacer
tgttacaatcccggattgcgtaccgtttgc	Protospacer
***************** ***   .*  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5603746 : 5611904

Escherichia_phage(42.86%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168807198.1\|5603746_5604886_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	1.0e-14	25.1
WP_168807200.1\|5604882_5606193_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	5.5e-81	39.4
WP_168807202.1\|5606217_5607162_+	SDR family oxidoreductase	A0A2K9KZK0	Tupanvirus	2.2e-71	44.6
WP_168807204.1\|5607184_5608240_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.0e-81	49.1
WP_168807206.1\|5608248_5608803_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	4.6e-37	44.1
WP_168807208.1\|5608818_5609685_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.9e-37	38.1
WP_168807210.1\|5609745_5610441_-	hypothetical protein	NA	NA	NA	NA
WP_168807212.1\|5610620_5611904_+\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	8.9e-76	40.5

DBSCAN-SWA_2

8079021 : 8162249

Paenibacillus_phage(25.0%)

transposase,integrase

attL 8080265:8080283|attR 8166457:8166475

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168810895.1\|8079021_8080233_-\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	5.6e-56	53.5
8080265:8080283	attL	NA	NA	NA	NA
WP_168810897.1\|8080431_8083656_+	RHS repeat protein	NA	NA	NA	NA
WP_168810899.1\|8083674_8088102_+	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA
WP_168810901.1\|8088105_8088687_+	hypothetical protein	NA	NA	NA	NA
WP_168810903.1\|8089339_8089870_+	hypothetical protein	NA	NA	NA	NA
WP_168810906.1\|8089951_8090464_+	hypothetical protein	NA	NA	NA	NA
WP_168810908.1\|8090489_8090879_-	hypothetical protein	NA	NA	NA	NA
WP_168812172.1\|8093383_8094703_+	hypothetical protein	NA	NA	NA	NA
WP_168810910.1\|8094719_8095133_+	hypothetical protein	NA	NA	NA	NA
WP_168802981.1\|8095221_8096324_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.5e-44	42.1
WP_168810912.1\|8096679_8099055_-	TonB-dependent receptor	NA	NA	NA	NA
WP_168810914.1\|8099396_8099804_+	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_168810916.1\|8100102_8100972_+	GTPase Era	NA	NA	NA	NA
WP_168810918.1\|8101080_8102394_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_168812174.1\|8102481_8102709_+	hypothetical protein	NA	NA	NA	NA
WP_078671929.1\|8102873_8103746_-	hypothetical protein	NA	NA	NA	NA
WP_168810920.1\|8103752_8106107_-	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	1.7e-149	40.8
WP_168810922.1\|8106400_8107165_+	DUF2520 domain-containing protein	NA	NA	NA	NA
WP_168810924.1\|8107285_8107807_+	HAD-IIIA family hydrolase	A0A222YVZ6	Synechococcus_phage	1.1e-05	26.6
WP_168810926.1\|8107820_8108762_+	UbiA family prenyltransferase	NA	NA	NA	NA
WP_168810928.1\|8108786_8109356_+	septum formation protein Maf	NA	NA	NA	NA
WP_168810930.1\|8109455_8110637_-	homoserine dehydrogenase	NA	NA	NA	NA
WP_168810932.1\|8112308_8113598_+	DUF2851 family protein	NA	NA	NA	NA
WP_168810934.1\|8113783_8114191_-	OsmC family protein	NA	NA	NA	NA
WP_168810936.1\|8114376_8115213_+	hypothetical protein	NA	NA	NA	NA
WP_078671940.1\|8115249_8116149_+	lipoyl synthase	NA	NA	NA	NA
WP_168810938.1\|8116533_8117868_+	TolC family protein	NA	NA	NA	NA
WP_168810940.1\|8117886_8119023_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_168810941.1\|8119052_8122235_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA
WP_168810943.1\|8122300_8122684_-	SdpI family protein	NA	NA	NA	NA
WP_168810944.1\|8122785_8125494_-	membrane assembly protein AsmA	NA	NA	NA	NA
WP_168810946.1\|8125624_8126224_+	RNA methyltransferase	NA	NA	NA	NA
WP_168810948.1\|8126525_8126924_+	hypothetical protein	NA	NA	NA	NA
WP_168810950.1\|8126963_8127500_+	hypothetical protein	NA	NA	NA	NA
WP_168810952.1\|8127559_8127901_+	hypothetical protein	NA	NA	NA	NA
WP_168810954.1\|8128688_8131133_+	hypothetical protein	NA	NA	NA	NA
WP_168810956.1\|8131139_8132243_+	DUF928 domain-containing protein	NA	NA	NA	NA
WP_168810958.1\|8132253_8132778_+	hypothetical protein	NA	NA	NA	NA
WP_168810960.1\|8132774_8139434_+	hypothetical protein	NA	NA	NA	NA
WP_168810962.1\|8139455_8140244_+	hypothetical protein	NA	NA	NA	NA
WP_168810964.1\|8140278_8147589_+	LamG domain-containing protein	NA	NA	NA	NA
WP_168810965.1\|8147474_8148470_+	hypothetical protein	NA	NA	NA	NA
WP_168810967.1\|8148473_8148833_+	hypothetical protein	NA	NA	NA	NA
WP_168810969.1\|8148896_8149259_-	helix-turn-helix transcriptional regulator	R9VW28	Paenibacillus_phage	1.8e-05	40.7
WP_168810971.1\|8149415_8149637_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_168810973.1\|8149623_8152281_+	DNA primase	NA	NA	NA	NA
WP_168810975.1\|8152508_8153303_+\|integrase	tyrosine-type recombinase/integrase	S5M9V8	Brevibacillus_phage	3.0e-13	25.2
WP_168810977.1\|8153299_8154163_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168812176.1\|8155566_8156556_+	hypothetical protein	NA	NA	NA	NA
WP_168810967.1\|8156559_8156919_+	hypothetical protein	NA	NA	NA	NA
WP_168810969.1\|8156982_8157345_-	helix-turn-helix transcriptional regulator	R9VW28	Paenibacillus_phage	1.8e-05	40.7
WP_168810971.1\|8157501_8157723_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA
WP_168810973.1\|8157709_8160367_+	DNA primase	NA	NA	NA	NA
WP_168810975.1\|8160594_8161389_+\|integrase	tyrosine-type recombinase/integrase	S5M9V8	Brevibacillus_phage	3.0e-13	25.2
WP_168810977.1\|8161385_8162249_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
8166457:8166475	attR	NA	NA	NA	NA

DBSCAN-SWA_3

8449999 : 8477748

uncultured_virus(20.0%)

transposase,integrase

attL 8454882:8454899|attR 8484430:8484447

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168803081.1\|8449999_8451220_+\|transposase	IS256 family transposase	A0A218MNI5	uncultured_virus	1.2e-61	61.0
WP_168811423.1\|8451382_8452717_+	beta-lactamase family protein	NA	NA	NA	NA
WP_168812184.1\|8452967_8453108_+\|transposase	transposase	NA	NA	NA	NA
WP_168811424.1\|8453399_8453570_+	hypothetical protein	NA	NA	NA	NA
WP_168811425.1\|8453630_8453951_+	hypothetical protein	NA	NA	NA	NA
WP_168811426.1\|8454060_8454345_+	hypothetical protein	NA	NA	NA	NA
WP_168811427.1\|8454354_8454597_+	hypothetical protein	NA	NA	NA	NA
8454882:8454899	attL	NA	NA	NA	NA
WP_168811428.1\|8455282_8455720_+	hypothetical protein	NA	NA	NA	NA
WP_168811429.1\|8455781_8456852_+	DUF1669 domain-containing protein	A0A1B2LRT6	Wolbachia_phage	1.9e-07	32.8
WP_168811430.1\|8456970_8458284_+	hypothetical protein	NA	NA	NA	NA
WP_168811431.1\|8458507_8459338_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_168811432.1\|8459373_8459724_+	hypothetical protein	NA	NA	NA	NA
WP_168811433.1\|8459749_8460043_+\|transposase	transposase	NA	NA	NA	NA
WP_168811434.1\|8460042_8460996_+\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.8e-20	28.0
WP_168811435.1\|8461060_8461711_+	hypothetical protein	NA	NA	NA	NA
WP_168811437.1\|8461723_8463508_+	DUF262 domain-containing protein	NA	NA	NA	NA
WP_168811439.1\|8464953_8465613_-	hypothetical protein	NA	NA	NA	NA
WP_168811441.1\|8465605_8466328_-	hypothetical protein	NA	NA	NA	NA
WP_168811443.1\|8466330_8468892_-	ATP-binding protein	NA	NA	NA	NA
WP_168811445.1\|8468884_8470126_-	DNA cytosine methyltransferase	K4HZD0	Acidithiobacillus_phage	4.0e-73	40.1
WP_168811447.1\|8470154_8470829_-	hypothetical protein	NA	NA	NA	NA
WP_168812186.1\|8470948_8471584_-	ATPase	NA	NA	NA	NA
WP_168811449.1\|8471552_8472455_-	hypothetical protein	NA	NA	NA	NA
WP_168811451.1\|8472454_8472733_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168811453.1\|8473206_8474151_-	hypothetical protein	NA	NA	NA	NA
WP_168811455.1\|8474370_8474652_-	hypothetical protein	NA	NA	NA	NA
WP_168811457.1\|8474705_8475968_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	2.2e-26	35.1
WP_168811458.1\|8476383_8477748_+\|integrase	site-specific integrase	NA	NA	NA	NA
8484430:8484447	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051205

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection