CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP050804	Arcanobacterium sp. 2701 chromosome, complete genome	2 crisprs	DinG,DEDDh,WYL,cas4,cas3,cas9,cas1,cas2	2	4	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP050804_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050804_1

1219054-1219154

Orphan

Consensus_repeat	Method
GAAAGGTCGGGTGCCGGTTTTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP050804_1

>merge|NZ_CP050804|1|1219054-1219154|CRISPRCasFinder
GAAAGGTCGGGTGCCGGTTTTTAAAACTATCCGGCACCCAACCGGCACCCGTTGAAGGTGAAACGGCTTGATAGCAATGAAAGGTCGGGTGCCGGTTTTTT

>NZ_CP050804|1|1|1219054-1219154|CRISPRCasFinder
GAAAGGTCGGGTGCCGGTTTTTA	AAACTATCCGGCACCCAACCGGCACCCGTTGAAGGTGAAACGGCTTGATAGCAAT
GAAAGGTCGGGTGCCGGTTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050804.1\|WP_168917947.1\|1209523_1210495_-\|DUF5309-domain-containing-protein	unknown	unknown	gnl\|CDD\|379950
NZ_CP050804.1\|WP_168917960.1\|1223615_1223810_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917955.1\|1218506_1218788_-\|VRR-NUC-domain-containing-protein	unknown	unknown	gnl\|CDD\|214959
NZ_CP050804.1\|WP_168917952.1\|1215726_1216332_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168918622.1\|1215256_1215562_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|372995
NZ_CP050804.1\|WP_168917949.1\|1211919_1213311_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|377466
NZ_CP050804.1\|WP_168917965.1\|1225290_1225476_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917958.1\|1222546_1223314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917963.1\|1224480_1224639_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917950.1\|1213314_1214787_-\|terminase	unknown	unknown	gnl\|CDD\|367410
NZ_CP050804.1\|WP_168917948.1\|1210509_1211058_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917959.1\|1223310_1223619_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917957.1\|1221839_1222517_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_CP050804.1\|WP_168917953.1\|1216425_1216875_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917961.1\|1223806_1224154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917962.1\|1224153_1224351_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917951.1\|1214758_1215070_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168917954.1\|1217149_1218526_-\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350771
NZ_CP050804.1\|WP_168917956.1\|1219261_1221730_-\|DNA-primase	unknown	unknown	gnl\|CDD\|173172
NZ_CP050804.1\|WP_168917964.1\|1224631_1225291_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276

Protein	Function_ID	Function_description	E-value
NZ_CP050804.1\|WP_168917947.1\|1209523_1210495_-\|DUF5309-domain-containing-protein	gnl\|CDD\|379950	pfam17236, DUF5309, Family of unknown function (DUF5309). This is a family of uncharacterized proteins found in viruses and bacteria.	4.22117e-44
NZ_CP050804.1\|WP_168917955.1\|1218506_1218788_-\|VRR-NUC-domain-containing-protein	gnl\|CDD\|214959	smart00990, VRR_NUC, This model contains proteins with the VRR-NUC domain. It is associated with members of the PD-(D/E)XK nuclease superfamily, which include the type III restriction modification enzymes, for example StyLTI.	9.53504e-14
NZ_CP050804.1\|WP_168917954.1\|1217149_1218526_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|350771	cd18013, DEXQc_bact_SNF2, DEXQ-box helicase domain of bacterial SNF2 family proteins. Proteins belonging to the SNF2 family of DNA dependent ATPases are important members of the chromatin remodeling complexes that are implicated in epigenetic control of gene expression. The Snf2 family comprise a large group of ATP-hydrolyzing proteins that are ubiquitous in eukaryotes, but also present in eubacteria and archaea. The bacterial SNF2 present in this family are members of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	4.78993e-107
NZ_CP050804.1\|WP_168918622.1\|1215256_1215562_-\|HNH-endonuclease	gnl\|CDD\|372995	pfam14279, HNH_5, HNH endonuclease. This domain is related to other HNH domain families such as pfam01844. Suggesting that these proteins have a nucleic acid cleaving function.	1.00371e-06
NZ_CP050804.1\|WP_168917964.1\|1224631_1225291_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	3.17273e-26
NZ_CP050804.1\|WP_168917949.1\|1211919_1213311_-\|phage-portal-protein	gnl\|CDD\|377466	pfam05133, Phage_prot_Gp6, Phage portal protein, SPP1 Gp6-like. This protein forms a hole, or portal, that enables DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction. This family also includes the old Pfam family Phage_min_cap (PF05126).	6.80766e-20
NZ_CP050804.1\|WP_168917950.1\|1213314_1214787_-\|terminase	gnl\|CDD\|367410	pfam03237, Terminase_6, Terminase-like family. This family represents a group of terminase proteins.	0.00217765
NZ_CP050804.1\|WP_168917956.1\|1219261_1221730_-\|DNA-primase	gnl\|CDD\|173172	PRK14709, PRK14709, hypothetical protein; Provisional.	2.13315e-91
NZ_CP050804.1\|WP_168917957.1\|1221839_1222517_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	3.0284e-06

>NZ_CP050804.1|WP_168917955.1|1218506_1218788_-|VRR-NUC-domain-containing-protein
MNEKHIEKHFKRLIEKHGGLCLKFVSPGTQGVPDRIIITPTGHITFAELKAPGKKPRPAQANMIRKLEKLGATVHIIDSITKAEETAHEILTT
>NZ_CP050804.1|WP_168917954.1|1217149_1218526_-|DEAD/DEAH-box-helicase
MKYSPHDYQAQAVKFILEHPTAAVFLGMGLGKTVITLTALQILEGQGKTRRALIIAPKRVAESTWPAEIEKWDHINLDYRVAVGTKAERAQAVDSDATVTIINRENLPWLYQHLGGKWPYDTVIIDELSSFKSHASQRVKVMVKARRHIERIVGLTGTPASNGLMDLFAQFRVLDDGQRLGKFITHFRNDFFDPDKRSAYQVFTWKPKPDGEKRIYDAIADVTMSMQTTDFLTLPELTMQSVVVEMSKGEKKTYTDLKKDMVATINDDDVIDAGSAGVLALKLQQLANGAIYNDATATKYTVLHDRKLDALEDLHESANGHPLLVAYWFKHDADRIKERFDGVREIRTPEDIADWNAGKIDMALIHPASAGHGLNLQTGGHLMVWFGLTWSLELYQQANARLFRQGQREPVTVTHIVTAGSVDERILVALEKKDLTQSALLDAVRAELTVGEVVGVGS
>NZ_CP050804.1|WP_168917953.1|1216425_1216875_-|hypothetical-protein
MTPHEQTTAWEKAIAEHDWNTARQLSDTAAQIAYICTLEAGDAIIRTHHTIQALELEKEHWENAYYDLAEHINASFPRRQRTQIPHTRRTKNPDTYTEDLHKALVSIQRELQRQPCGIAGVRITSKGSEFMTREEAYQAMKQEYRFSEA
>NZ_CP050804.1|WP_168917952.1|1215726_1216332_-|hypothetical-protein
MHATITPTQCAELDIMHQELNDALQPSLHAIQYHLAPACRSARDHHQPDLDAINADHAHITNIAQEHGYATATALAPHLNQLNTENLTYLTETYIEWAQLLKLTPQPTQHLCPMCTQTNLLYRDTDTRYICPACEGAWTPPQLRNAQKIVIATAGKWITRKQARNTYTITAPHLRKLIHRGIITPNHDGLIYEPQLAKHLQ
>NZ_CP050804.1|WP_168918622.1|1215256_1215562_-|HNH-endonuclease
MPTNRTGTAKHKRFRQNVLHRDQTNGLTHCPLCGTQLAWGTHGQPNSPEADHIIPARWGGADTTDNGQTICRHCNQSKGDGRKQQKFKKAQQPTNTTDINW
>NZ_CP050804.1|WP_168917951.1|1214758_1215070_-|hypothetical-protein
MGLKAVEEAVKKPPLDPSKRTKYRKVATAASANDLLGTLETMRDRLARAIDDPDTAPRDLAALTKRLRETMDDIHTLTQAYEEASGVSDLEAVADAPFSAEAI
>NZ_CP050804.1|WP_168917950.1|1213314_1214787_-|terminase
MPRSQQRLSELASFVHVPDGIVSTEWPLVAAQLQRINIGLDMWQRNAIQLALSKRADGSYAASIGGVCFSIPRQVGKTYTVGWLIFALCMAKPGMLVVWTAHHTRTSDETFDAMRTMATTGKAAAMVKTVRAANGQQTIIFHNGSRILFGAREQGFGRGFAEIDVLVFDEAQILTESALSDMVPATNAAPNGLVFLIGTPPRPKDPGEAFTIKRNSALSKDADTLWIEFSADADCNVADWDPGYVDWAQVEKANPSYPHRTSKNSILRMRKLIGSNENFKREALGIWDQAGVATRKISQELWDSTIGVPPSSGVKCYGVAFSFDGDRQSVVGVLKHEHGFHANLIGSYTGSTDDGVAGLADWLAERWRDAGLIVLSGAAGAGLLSQALLDRGVPKKIVKVLSTREYFTACQMLVEAVKDGSLTRPAGGANDALDASVAVSDEKKRGSDGAWGWQATSFDGDETPVEALSVAVWAAKMNKRVPGRKQKALV
>NZ_CP050804.1|WP_168917949.1|1211919_1213311_-|phage-portal-protein
MVENMMVFHAPRVYGLPDDLQEKLGLLVQQWSVKRPRNFLRQSYVDMKIDVKNLGISIPDEVARDLEVVSGWPEKAVHVLSSRCVWDGVVAASGEEDPYGLERVLHENRFDVELPQAISSELTHSVAFISTTPGDVYSGESEVVILPHSAQWATALWDRSRRCLSYGLVINELDKAGNPARLTLLTPFEAIVCENRGRGWFVADVRTHGLSRVPMEALTFRPSLDRPFGRSRITRAVMTITDRAIRAALRMDISSELYTAPGLLLRGVSEEAWEEISKSWTWQMGAVKGLTPDESGESPDVSVIPQQSMLPYTEQIRSLATEFAGVTSLPVSSLGIVQDNPASADAIYAAKEELVVEATNTNRVNGYALSRVYQNVVNLMHGDVANPLSFSTRWRNPAMPSIVSQADAMVKQISAIPELAYTDVALEEFGYTGEQISRIRSQIRKAQGNILVDQILNGSGENL
>NZ_CP050804.1|WP_168917948.1|1210509_1211058_-|hypothetical-protein
MAENTAVEEEVKPAEVDGAKPEETVEDEFLGDAGKAALKKEREANKANAKRIAELESLLRESENASKSEEEKTRERLTALEQSLEAERRQKELLEASNSTGVPVELLAGPQDDLTAYAQALLDWQKKQASEPADDPRHPVPSLSQRPEHSGAVSIDEQIRAAVEAGDKATVSMLKALKLGKQ
>NZ_CP050804.1|WP_168917947.1|1209523_1210495_-|DUF5309-domain-containing-protein
MTNTLTEMATTYNLPNYTGELFEATPANTPFLSAIGGLTGGKSVASPVFSWQGYDLRDANAENQKTEGADVAAYTEQKRFNVENVTEIHQEAISISYSRLGANRMRTVDSGEKMVQIGSTSVPASELAFQIDVALKNIARDVEKGFLNNTMVKPSDNGTARRSGGLLGVIKTNKVTTEKTAKTITEDDVLDLIQKVWDNGGMRESETATLIVNSTLKRALTRIFLKDANRVESSRNVGGVNLQTIETDFGKLNIMLNSYVSKTDLIVCSLEQCAPAFLEVPGKGHFFVEPLAKTGSAEKVQLYGEIGLQYGNEKAHGVLTVAS
>NZ_CP050804.1|WP_168917956.1|1219261_1221730_-|DNA-primase
MPTSIDQRAHQLWNAGISILPITPASADGDKKPALSWKRLQTSRLTETELNTWFNGTSNYGLGVVMGEVSGDLMMIELEGRGAQHLPLLTQTATDSGLGELWTRLFQWAETTPSGGWHFYIKAPGNTHGNRKLAKNKTGEVIAETRENGGYSVVAPTDGQRFHHTHNSAWAFVSESDPTMLTPFTLDELDAILTVFKTIDETPRPTKPGTPQLTITGNNARVDGVSPLDDFESKTSWNEILQPHGWTPLFTRGAETFWRRPGKTTGISASTGHANDRDRLWVWTTSTDFEAEVPYTKQGAYALLEHGGDHSKAAKYLYEKGFGEQAKRVRDATEISFDKWIREGAPAITPAPAPVAEPVAAPAPAVLEPAEYTLTDDGNALRFQDAFTSIYRYIPEHKSWSFWNGHVWDLDGADAQVAEAARNLARTFPAQDKAEQAHRRRSLGANSIRNMLALAKNAQGIYTPLTVFDTDPYLLNTPAGPVNLKTRKVTPATPKGLFMRSTTVKPDWDMPTPKWLNFLAQTFVSTDLNAGKEVTDYVQRLIGLALIGKVHEQILPFFHGTGANGKTTMLNVVQHILGTGPTGYTITSPSELLTASDRHPTEIAALAGARLAVISELEEGKRIAEAKVKQLTGGDVITARFMGKDFFTFAPSHTLIVLTNSVPETTSGGSPALWRRVRRVPFLNVVPKKDRNPNLEAELMMEAPGILAWMIDGTTKYLESGLREPVVVEQATAEYESDQDTVAQWIGSGAVDLVEPSVYSQAPAGRVYSVYERWCRVNGVQPVASNAFGRRLKPFGVNSVRSHGKRLYEGLRIQEDLDSELS
>NZ_CP050804.1|WP_168917957.1|1221839_1222517_-|hypothetical-protein
MSLSMSLNDAFASAKQVKPETVGETVGGTITNTKIQQVTDYTTSEPQFWPDGKPKEQLIVSITTPEGVEGAAYIKLWGQQRTAMMDAIRQTGLDADHALAPGNKLWITFTGEEPNTKNPRLNATKLYVYRIEVTANLGGALDGSAPVTPPAPVSAPVATPPAPAAPVTPPAPVSAPVATPPAPAAPAVDPNNVQQLFASGFNDEQVASFTGLDVQVVATLRQNAA
>NZ_CP050804.1|WP_168917958.1|1222546_1223314_-|hypothetical-protein
MTTTAKQAGDALKTLIEDSIRYAPRSLQTMIGPSEIGMECDHCLAARLAGWIKTEPTVGWLPFIGTCVHAYYEDLFTKLNNETPGAETQPVFLCENRVTVGEIDGKPVTGSTDLFLPDQYGLAETGMTVDWKIVGKSTLDRVKRNQHPGRKYEVQAHLYARGWNQAGYPTSHVCVYFQPRNSLTLNDGYIWIAEYDEQIALDGLARVERMLKNIRALETVSKDARDKWITGLPREPGCFDCAKYPDFHTTLGQVF
>NZ_CP050804.1|WP_168917959.1|1223310_1223619_-|hypothetical-protein
MNTENLMNQYLALKEASENIKQQMEIIKQQLGQALPEGGKVSGHNVTWTKPRLNTTALAKDFTPETNPELYKQTIDSKAVSQHLAPAVLDKYRTGTPTITIR
>NZ_CP050804.1|WP_168917960.1|1223615_1223810_-|hypothetical-protein
MITLLILTNLATATIAAVYYVRYNIAADDLYTAYKVIIKNQNKIAAIGRELDKDLTKTIEGENK
>NZ_CP050804.1|WP_168917961.1|1223806_1224154_-|hypothetical-protein
MNDNTLKIFAFFHTDDTLRIIGGPEDKTTLPFTLNDVDKLLYDLLFATKIARTYVVEHKGHVIAQTAEGCMATYHQLAVMLNAKLKKEKIPNIANELTGIVVAIKKLVEIGDKDE
>NZ_CP050804.1|WP_168917962.1|1224153_1224351_-|hypothetical-protein
MKPGYTVQPGDNPRTDILTSDGTRLYYKGRGKYGPDKNSNISIHIRDLQKSFGPLTIAPPEKETN
>NZ_CP050804.1|WP_168917963.1|1224480_1224639_-|hypothetical-protein
MHKPNLPTLSNALIGYGEAQASAEKTLQYLHATINKAHETEKIIEELLETND
>NZ_CP050804.1|WP_168917964.1|1224631_1225291_-|pentapeptide-repeat-containing-protein
MKTNAEKIAVWRKENPHARLTHYLLLLTLDLETLADADLRKADLWGADLRGADLSDANLSDANLSDANLSDANLSDANLSDANLRWANLRWANLSGADLRWANLSGADLRGANLSGADLSDADLWGAGHILQISNFYQYQAIFIPTPDGWKITIGCWTGSIEKLRTLADQDDGWPESTDTQIIENRPRLHLIADMCEMHVARFPGYTEGLAEKWGTADA
>NZ_CP050804.1|WP_168917965.1|1225290_1225476_-|hypothetical-protein
MKILYTIIAGGLTVAGGNLVALSQFVEGWERITYGAGAMLCVSLAWPLVLRLSHLMMKEEN

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Crispr_ID: NZ_CP050804_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP050804_2

1880511-1881250

TypeII

Consensus_repeat	Method
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CRISPRCasFinder
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CRT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	PILER-CR

11 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP050804_2

>merge|NZ_CP050804|2|1880511-1881250|CRISPRCasFinder,CRT,PILER-CR
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCCTCGATTTTAGCTGCTCTGGCATCGTCTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCCTGAACAGCTCCATGCGAATACTCGATTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCACGCCACCCTGGCTTACTGAACGTGCCGTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCGCTGCGGCGCGAACCAGAAGCAGAAGCTTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCTGGCCTTGCACTTGTTGCATTTCGATCTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCGCGGTATCTGGGAAATCCCGGACGTTGTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCTAACGATAACAGGATCGGCAAAGCCCATAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCACTCTTTCAGGCATCGCACAAAAGTTCTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCTAGAAGAAGCTATCGAACAGATTGGCGCTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCGGCGAAAATAGTTAGGTTTACAGCGTCTTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGCCTATTCTAGGGGTTCCACGCGTGATACTTAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC

>NZ_CP050804|2|2|1880511-1881250|CRISPRCasFinder
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CCTCGATTTTAGCTGCTCTGGCATCGTC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CCTGAACAGCTCCATGCGAATACTCGAT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	ACGCCACCCTGGCTTACTGAACGTGCCG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GCTGCGGCGCGAACCAGAAGCAGAAGCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTGGCCTTGCACTTGTTGCATTTCGATC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CGCGGTATCTGGGAAATCCCGGACGTTG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTAACGATAACAGGATCGGCAAAGCCCA
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CACTCTTTCAGGCATCGCACAAAAGTTC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	TAGAAGAAGCTATCGAACAGATTGGCGC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GGCGAAAATAGTTAGGTTTACAGCGTCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTATTCTAGGGGTTCCACGCGTGATACT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC

>NZ_CP050804|2|1|1880511-1881250|CRT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CCTCGATTTTAGCTGCTCTGGCATCGTC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CCTGAACAGCTCCATGCGAATACTCGAT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	ACGCCACCCTGGCTTACTGAACGTGCCG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GCTGCGGCGCGAACCAGAAGCAGAAGCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTGGCCTTGCACTTGTTGCATTTCGATC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CGCGGTATCTGGGAAATCCCGGACGTTG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTAACGATAACAGGATCGGCAAAGCCCA
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CACTCTTTCAGGCATCGCACAAAAGTTC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	TAGAAGAAGCTATCGAACAGATTGGCGC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GGCGAAAATAGTTAGGTTTACAGCGTCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTATTCTAGGGGTTCCACGCGTGATACT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC

>NZ_CP050804|2|1|1880639-1881250|PILER-CR
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	ACGCCACCCTGGCTTACTGAACGTGCCG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GCTGCGGCGCGAACCAGAAGCAGAAGCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTGGCCTTGCACTTGTTGCATTTCGATC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CGCGGTATCTGGGAAATCCCGGACGTTG
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTAACGATAACAGGATCGGCAAAGCCCA
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CACTCTTTCAGGCATCGCACAAAAGTTC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	TAGAAGAAGCTATCGAACAGATTGGCGC
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	GGCGAAAATAGTTAGGTTTACAGCGTCT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC	CTATTCTAGGGGTTCCACGCGTGATACT
TAAGTCTATCAAGGAGTTATGTAACTGACTCCCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP050804.1\|WP_168918490.1\|1880139_1880460_+\|CRISPR-associated-endonuclease-Cas2	cas2	mkCas0206_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|273699
NZ_CP050804.1\|WP_168918493.1\|1883337_1885500_-\|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase	unknown	unknown	gnl\|CDD\|213701
NZ_CP050804.1\|WP_168918484.1\|1871506_1873768_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227604
NZ_CP050804.1\|WP_168918492.1\|1882267_1883341_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_CP050804.1\|WP_168918495.1\|1886528_1887305_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP050804.1\|WP_168918499.1\|1893525_1894344_+\|glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|225974
NZ_CP050804.1\|WP_168918485.1\|1874030_1874441_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376684
NZ_CP050804.1\|WP_168918488.1\|1875939_1879224_+\|HNH-endonuclease	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375896
NZ_CP050804.1\|WP_168918663.1\|1866643_1867474_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223635
NZ_CP050804.1\|WP_168918486.1\|1874452_1874641_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225177
NZ_CP050804.1\|WP_168918497.1\|1887993_1889550_+\|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl\|CDD\|273267
NZ_CP050804.1\|WP_168918664.1\|1892260_1893529_+\|DUF1727-domain-containing-protein	unknown	unknown	gnl\|CDD\|223840
NZ_CP050804.1\|WP_168918498.1\|1890020_1891814_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225420
NZ_CP050804.1\|WP_168918487.1\|1874819_1875749_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|259798
NZ_CP050804.1\|WP_168918482.1\|1867360_1869616_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168918494.1\|1885634_1886387_-\|NYN-domain-containing-protein	unknown	unknown	gnl\|CDD\|350289
NZ_CP050804.1\|WP_168918496.1\|1887359_1887818_-\|DUF1801-domain-containing-protein	unknown	unknown	gnl\|CDD\|378058
NZ_CP050804.1\|WP_168918491.1\|1881914_1882091_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP050804.1\|WP_168918489.1\|1879211_1880147_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP050804.1\|WP_168918483.1\|1870301_1870799_+\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039

Protein	Function_ID	Function_description	E-value
NZ_CP050804.1\|WP_168918490.1\|1880139_1880460_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|273699	TIGR01573, cas2, CRISPR-associated endonuclease Cas2. This model describes most members of the family of Cas2, one of the first four protein families found to mark prokaryotic genomes that contain multiple CRISPR elements. CRISPR systems protect against invasive nucleic acid sequences, including phage. Cas2 proteins have been characterized as either endoribonuclease (for ssRNA) or endodeoxyribonuclease (for dsDNA), depending on the system to which the Cas2 belongs. CRISPR is an acronym for Clustered Regularly Interspaced Short Palindromic Repeats. The cas genes usually are found near the repeats. A distinct branch of the Cas2 family shows a very low level of sequence identity and is modeled by TIGR01873 instead of by this model (TIGR01573).	1.94769e-15
NZ_CP050804.1\|WP_168918497.1\|1887993_1889550_+\|DASS-family-sodium-coupled-anion-symporter	gnl\|CDD\|273267	TIGR00785, Uncharacterized_transporter_HI_0020, anion transporter. The Divalent Anion:Na+ Symporter (DASS) Family (TC 2.A.47) Functionally characterized proteins of the DASS family transport (1) organic di- and tricarboxylates of the Krebs Cycle as well as dicarboxylate amino acid, (2) inorganic sulfate and (3) phosphate. The animal NaDC-1 cotransport 3 Na+ with each dicarboxylate. Protonated tricarboxylates are also cotransported with 3Na+. [Transport and binding proteins, Anions, Transport and binding proteins, Cations and iron carrying compounds].	8.13434e-82
NZ_CP050804.1\|WP_168918484.1\|1871506_1873768_+\|hypothetical-protein	gnl\|CDD\|227604	COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning].	5.72418e-11
NZ_CP050804.1\|WP_168918483.1\|1870301_1870799_+\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	6.89844e-21
NZ_CP050804.1\|WP_168918485.1\|1874030_1874441_+\|hypothetical-protein	gnl\|CDD\|376684	pfam01957, NfeD, NfeD-like C-terminal, partner-binding. NfeD-like proteins are widely distributed throughout prokaryotes and are frequently associated with genes encoding stomatin-like proteins (slipins). There appear to be three major groups: an ancestral group with only an N-terminal serine protease domain and this C-terminal beta sheet-rich domain which is structurally very similar to the OB-fold domain, associated with its neighboring slipin cluster; a second major group with an additional middle, membrane-spanning domain, associated in some species with eoslipin and in others with yqfA; a final 'artificial' group which unites truncated forms lacking the protease region and associated with their ancestral gene partner, either yqfA or eoslipin. This NefD, C-terminal, domain appears to be the major one for relating to the associated protein. NfeD homologs are clearly reliant on their conserved gene neighbor which is assumed to be necessary for function, either through direct physical interaction or by functioning in the same pathway, possibly involve with lipid-rafts.	0.000342598
NZ_CP050804.1\|WP_168918488.1\|1875939_1879224_+\|HNH-endonuclease	gnl\|CDD\|375896	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain. This is an alpha-helical lobe domain found in Cas9 proteins. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. Amino acid residues located in both the nuclease and alpha-helical lobe clefts are highly conserved within type II-A Cas9 proteins.	3.8181e-89
NZ_CP050804.1\|WP_168918663.1\|1866643_1867474_+\|HAD-family-phosphatase	gnl\|CDD\|223635	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only].	5.14844e-42
NZ_CP050804.1\|WP_168918486.1\|1874452_1874641_+\|hypothetical-protein	gnl\|CDD\|225177	COG2268, COG2268, Uncharacterized protein conserved in bacteria [Function unknown].	0.00629804
NZ_CP050804.1\|WP_168918664.1\|1892260_1893529_+\|DUF1727-domain-containing-protein	gnl\|CDD\|223840	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane].	5.96721e-49
NZ_CP050804.1\|WP_168918498.1\|1890020_1891814_-\|transcriptional-regulator	gnl\|CDD\|225420	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription].	1.12051e-43
NZ_CP050804.1\|WP_168918487.1\|1874819_1875749_+\|hypothetical-protein	gnl\|CDD\|259798	cd03399, SPFH_flotillin, Flotillin or reggie family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. The flotillin (reggie) like proteins are lipid raft-associated. Individual proteins of this SPFH family may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. In addition, microdomains formed from flotillin proteins may be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and interact with a variety of proteins. They may play a role in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease and in cancer invasion, and metastasis.	2.6132e-16
NZ_CP050804.1\|WP_168918499.1\|1893525_1894344_+\|glutamine-amidotransferase	gnl\|CDD\|225974	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only].	2.98218e-75
NZ_CP050804.1\|WP_168918494.1\|1885634_1886387_-\|NYN-domain-containing-protein	gnl\|CDD\|350289	cd18722, PIN_NicB-like, LabA-like PIN domain of Pseudomonas putida S16 NicB and related proteins. Curiously NicB from Pseudomonas putida S16 is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine. This subfamily also includes the uncharacterized CPP15 (plasmid) protein from Campylobacter jejuni. This subfamily belongs to LabA-like PIN domain family which includes Synechococcus elongatus PCC 7942 LabA, human ZNF451, uncharacterized Bacillus subtilis YqxD and Escherichia coli YaiI, and the N-terminal domain of a well-conserved group of mainly bacterial proteins with no defined function, which contain a C-terminal LabA_like_C domain. Curiously, a gene labeled NicB from Pseudomonas putida S16, which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls into the LabA-like PIN family. The PIN (PilT N terminus) domain belongs to a large nuclease superfamily. The structural properties of the PIN domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions; in some members, additional metal coordinating residues can be found while some others lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	2.83098e-26
NZ_CP050804.1\|WP_168918496.1\|1887359_1887818_-\|DUF1801-domain-containing-protein	gnl\|CDD\|378058	pfam08818, DUF1801, Domain of unknown function (DU1801). This large family of bacterial proteins is uncharacterized. They contain a presumed domain about 110 amino acids in length.	0.00150998
NZ_CP050804.1\|WP_168918493.1\|1883337_1885500_-\|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase	gnl\|CDD\|213701	TIGR02336, hypothetical_protein_BL1641, 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase. Members of this family are found in phylogenetically diverse bacteria, including Clostridium perfringens (in the Firmicutes), Bifidobacterium longum and Propionibacterium acnes (in the Actinobacteria), and Vibrio vulnificus (in the Proteobacteria), most of which occur as mammalian pathogens or commensals. The nominal activity, 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase (EC 2.4.1.211), varies somewhat from instance to instance in relative rates for closely related substrates. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP050804.1\|WP_168918495.1\|1886528_1887305_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	3.17121e-17
NZ_CP050804.1\|WP_168918489.1\|1879211_1880147_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	4.03014e-83
NZ_CP050804.1\|WP_168918492.1\|1882267_1883341_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	3.40052e-14

>NZ_CP050804.1|WP_168918490.1|1880139_1880460_+|CRISPR-associated-endonuclease-Cas2
MSSDPMWCLVMFDLPTKTASQKREYSSFRNYLLDIGFSRVQYSVYVHYSPTGLIGTRLVKGIKANLPPGGEVRIVHISDRQWSKAFRFANAIEEKPEEAPQQLMIF
>NZ_CP050804.1|WP_168918489.1|1879211_1880147_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGLTTERWRSLDFSQFRGSISAVRGALSVKNDELDLTVPTADVSVVLIGVGTKLSAGAMHRLLEDDVAVIFCDWKGVPYGGSFGWSDHSRVGARHRAQASLSEPKRKSTWARIVKAKILGQAAVLDYCSRPGGSLLRNLSKNVRSGDTSNVEGQAARSYWQYLWGDEGFKRQPGIRDQVLPSNSMLDYGYTILRGHAIRAVFSAGLSPTIGLFHHGRSNYFALADDIIEPFRPAIDACIASEFSGESIESPDIRRAIVEVAHSTFGQTGNSIPTEMTALAQRLGQLIEGDPQKLLVNVWSPIMTLGITDE
>NZ_CP050804.1|WP_168918488.1|1875939_1879224_+|HNH-endonuclease
MSDVINFRVGIDVGTNSVGLAAIEIGPDNLPSKILNSVVFTHDGGVDPQNRKTAATRLAVSGVARRTRRLIRRRKQRLRALDVFLQSHGYPCPNLEEFDDPHFPWHARAQLVSEPVAQEELPELFSVAIRHIARHRGWRNPYSRVESLHLPTPPSEELNNLKNRLIEETGVVLDEDATPAEIITEVISDMRKIRGPEGILGGKLRQSDNANEIRKIGEVQGLDSSFINDVIDHVFAAESPKGSSAKRAGKDELPGQHDKFRAEKAHPAFQEFRIVSVVANLRIKDLETGSIRKLTRDEMDTVVTYLMNASAEDSVTWDDVATKLEISRDCLSGTASPGPDGDRPYLIPPTNTTNQRILESKLKPLIAFWKNADLDTRSTLINEMSNSSEITDDSPGAEEVHDFLTSLADTELEKLSTISLPAGRAAYSVDSLQRLSRRMLNDGVDLFTARKLEFDVPDDWRPSAAPIGDPVGNPGVDRVLKIVNRWLMNVTDKWGVPATVNIEHIRGGFGSEAMAREYEREVGQRFKRNQMIIAKIQKDNDISGPVRSADITRYLAVKRQNGACAYCGTTISLGTCEMDHIVPRKGQGSTNSRSNLLATCRSCNHSKGNRLFNLWAKEQNNPNISFEKAKDRITFWIKDDGLSPKQWNQFKRDIIMRLGRVTEDDELDSRSIESVAWMARELRHRIESHYLSTGSDTKVNVFKGMITSEARKASGFEMQVEMIGDRGKTRLDRRHHAMDACTIALMSPYVAQVLAERINLREYQQLTRERFTWKEYRGKDETHRISYGKWLNSMNRLLVLFNEALRSDSIPIMEDLRLRLGNGTAHDATIHKFGKKRLGDAWSFEDIDKASTPQMWLALTRCSDFDQKDGLPENPERTIRVKDVYYTADDELELFRTKAALLSVRGGYAEIGNTIHHARIYRINGKKISYAMVRVFAVDLHKHRHEDLFNVVLPPESISIRTAAPKIKQALADGTAEYLGWVVAGDEIEIIPSDPKAFAKGAIGELFEDFPGLTRFKLVGFDSPSKLRLRPVKLSSEGLNDNFTSGSHDIIAKAGWRPEINVVFSKAQVRVIRRTTLGNIRNTSSSHLPSSWQV
>NZ_CP050804.1|WP_168918487.1|1874819_1875749_+|hypothetical-protein
MSVSELISDRETFSSQVAQGAEEDLARMGIPVDTLQIKDISDKNDYIMALSAPEAQRVSRIARVATAENETQANEAEAESKRKIAEQNKDLEVYQAEMKRMTMEARAIADAAEPIERAKQEKLITLREQEVAEQKAVLKERELEASVRKPADAERYRVEVQTEARKVEAVLKAEADAEAIKKTGNAQAEASKALGLAQAEADKAQGLARAEADKAQGLAEATAMDAKAYECIDKMTVISTDGTTALTRGVTNNVSQLNEVINDLLGINLGTLTSGILQSTKLFQTEDHQAETEGHDAELSAPKTGLDEE
>NZ_CP050804.1|WP_168918486.1|1874452_1874641_+|hypothetical-protein
MLAALHLLVSRLRIAGPDEALVISGAGESGAMKIVPPGGKVFVVPILQSTSKISLEAYKIPL
>NZ_CP050804.1|WP_168918485.1|1874030_1874441_+|hypothetical-protein
MGSGARGGTVYAVICVVTIIGLLIFARFYRLLASAAKKSEIEESVVGKEFIVVSTMDNIVRGTVRFRGSDVEFLAHAPHDETSIAPGDKFTVLSDVRPYITITRIDECLKKTLSLFEKKDYGHYGSYFTSTPFLLR
>NZ_CP050804.1|WP_168918484.1|1871506_1873768_+|hypothetical-protein
MKKDDAIRADQRIDEIAQYLTAKLKDQKDASKSGDSEDYRKARLIHDYIIKNVEPEADDKTSSGQYYVDSAEGDGKKYEIHSLEAGLFAHKGVCQTYAIMFDRIASRMGLDTRYIRGKKTFGYYAEDDTRAKERIEKQIEAGRKIAAKGGRWPDANHSWNQVKIDGQWYHLDLTVDAVAARVAYKYTYGGFLLTDEEFGKPASWWLGVFNNKSYYTYVDVMWNQSEAQPATTPMNFGSLFNAKHFSRPILPHLDGKYHPLGSFNDLTQGTISTHTTSEQAQPVTQIVSAYGADEKAEIAAGTSADELLKLLKVQGITTQTQAEYVLGTIEDSPVSLETPDEWTAVKDTIDSQVDLHSVAENGAKLTIPVAVVKPGTESHALARIQAKNGSAHIDQIHPQGESYDERVDKDAYEAQRKVAEATILSDITSSYTDGDTNTSTIHVSVQGLDTIKLDTPGEYPVVVVAQGKDGLWTKLDYQVVVDEKQRPSSVTITTKDNADVLNVASDTKYYVDPSSFHSFLGKREGVNLIAKRTNSFGLTSQVDETISFVDSAGKEWPHNESEDIFIDADGNRLFNDIKMVDLVRKAGSYRIKVTAQYAQEAPKVRYITVNITNGDDQASEAAQHEAIMTVDRLENLSMTSKIKYENEIRELSSASAIADVVKRATNDLSEKTSVSYIVEHVDKETGQALTYPVKKIDFVGATVKEQADSYLLSKGHLVDLTEQELRLTGGGQKITFTYSRQADPANQTDTVAE
>NZ_CP050804.1|WP_168918483.1|1870301_1870799_+|carboxymuconolactone-decarboxylase-family-protein
MTEQTSNPVTPVKPPYIDQVLPDVYNAMEGVAVALGKAYDDVDLPRTLVELAYLRASQLNGCATCLSVHVPRALQAGVSQCQIDMLPAWRHSQRVFSDQEIMAIRLAETITRLPEDADYSALIGEALSVFTKEQLVALEWGIISINAFNRVSVVSQHPTRKYPKN
>NZ_CP050804.1|WP_168918482.1|1867360_1869616_-|hypothetical-protein
MRARLIAILVGILGVIGIVSTGVLASALSTTAPTSSRDSVLFIGMAGVKPADIDLSNPALSRLLDDYSVAALTPRSVSTLTCPSEGWMQLRTSRDVSDRLPESFVVSSGDECYPASIIEDPASIDADHAPVHIRNFAGRLGQTQWPDKPLFSENVTAIGRNAVIPVASKDGTVDHWYPLPDAGFAENQEKSQTELTRILDTVPADVVVDIGSIRGAPRNLDVATQHTFVEQKLINILTANKHSDHPRKVIIASLGDQWRRAHLHFFATNIDIDGASGPATIHSDLTRATGFITIADVRNLITGNYSGLRTESKPSLTAAMVPVLDVAHHAYTAASSSAKWYQFFNMVVLIGIAGVLLCFLAQPGPQGHRWGAPRKIWSVLEQVNLWAFAWVPAAFILNFLPWWDLPGGPGAMQAWAIGITSLIAVALVAISHLSVHRAGFIALVAFSVLSIDIIAGSPHQRNGFMGSLILTSRRYYGISNRTYLILVVGGLVGSLLIINWLQLRRAIDDDTRVSTWVFATIGVIAVAIDAIPLWGADFGGPPGLIAGFGVAILVITRKKLRWWHLLVWVASTVAVMGAVGFVDARRGGESHIGRFWAKFGTAESWAIIGGKIRDVTRSFVGRPDLLILIALFLIAGVLAIYATRYLNNVSGIHLSSLHTLTSGYGFIPVAIGIAVGILVAVPINDSGAIMIKEGLYIALPALSAMIAGQAAQRPSRQERLKDSSAPVVVNVISERVSIIANVIRRVTHRNS
>NZ_CP050804.1|WP_168918663.1|1866643_1867474_+|HAD-family-phosphatase
MVALDIDGTTIRHDTSLSPRVRDAIHAHLDAGTHLVFATGRGITGTQIALADVGFNRGITVMCNGAVTASVGGELPDSVTTALPDFLDDDGPVYRLVEAHTFNPRREIEVLSAGLPDDVWYALETLDEPTRVTYPFPADELSGPSRLVSIDELASDQATRLTVRAAKMSAHELLEAVNQLGLRGVEYAVGWSAWMDITPEGVSKASALESVRRRWGIDLAHTVCVGDSGNDVDMLAWAGLGIAMGNAPDYVRDYADAFTDHVDDDGCAAVLESLLP
>NZ_CP050804.1|WP_168918491.1|1881914_1882091_+|hypothetical-protein
MSFIDDDGMLLFDNGGVTFDKKTAFSLFRSFPHDFTQEQIEIIKRQLPHWYDFFSDRL
>NZ_CP050804.1|WP_168918492.1|1882267_1883341_-|aminoglycoside-phosphotransferase-family-protein
MNDVIDIARQFRISGDITSCDRWGDGHINRTYRVTTDSADYIVQQINTTVFTDVDSLMNNIKLVTEHLVKKGKETLEIIPTLDGALYLKHGDEFFRMYRYIDNSRSYSLATSPDMVRSVAATFGQFQRDLADFDATMLTETIPFFHHTPTRYQNLLTSIEKDTAGRVADVPDEIAFFMERAAEYSRVTDLMASGEIPSRVTHNDTKINNILLDADTGEARAVIDLDTVMPGSLLYDFGDALRTGAALADEDEKDRSKVGFSLDLYTAYCEGFIPALRETLTPAELDLFAFSAKLMTAECGMRFLTDYLDGDIYFATDYPEHNLVRARNQIALVADIERKYEQMCAIADRVYDGAERK
>NZ_CP050804.1|WP_168918493.1|1883337_1885500_-|1,3-beta-galactosyl-N-acetylhexosamine-phosphorylase
MSVGRFTIPTEENFIQQSTELAEKWGADAIRNSDGTHLDDDVINMGKRIYSAYFPNRGHNYFMKDHMDCVPMVYLMSERTRATDTTVDVPLMVTYFAEQLTINRDAAPQRFWEVIDRTSGEVLPIDQWELDPHTDVVHIHNAHPMHEYTVTFLAYVIWDPVQMYNHITNDWGDKEHEIAFDPRHPEIQDFMLNTLDKWLVDNPHVDVVRFTTFFYQFMLIFNNERKEKIVDWTGFAVTVSPRALDEFEREYGYRMRPEHFVDGGSYGSSFVYPSKEQRDWLDFTANFVHSLMKQMVERVQAAGKEAMMFLGDQWIGTEPYSSTFPNVGMDAIVGSVGDGTTTRMIADIKGVKYHEGRFLPYFFPDSFYEGADPSIEAWDNWRKARRAILRSPLERMGYGGYLSLAAKFPKFVDDVATIANEFRDIYDKCSGKGAQTQLTVALLDAWGARRSWQEFTVAHALPNKYNRSFYGILEALSGMRVNVRFLSFDDVLANGIDPEIDVIINAGPQGTAYSGAQAWKNPQLVSLIRSWVSSGKGFVGVGQPSAVEHGGRYFQLADILGVDQEIYRSLNVDKYWPDLTEDHFVIQDIPRESLDFGEAVINTFPISEETTVISGLDGQVQLAVNTYDDGRGVYLSGLPYSALNARLLERALFYAAHKEDQYAVWGSSNPECEVAYFADKNIYAVMNNSEKPQQTVVSLPRGQSENFDLAPSAIVWKELA
>NZ_CP050804.1|WP_168918494.1|1885634_1886387_-|NYN-domain-containing-protein
MGLQRRTLTHATRPIVTAILVDGGFYRRRAYSLFGDKTEKDRADELLKYCHRHISKSRSSLYRIFYYDCPPSDKVFYHPLLKKQVDLRKTDKYRWSTNFFEELTKKRKVALRLGEELETQSGYRLRPVILKKLLAGRIAIEDLSERDFELDIVQKDVDMRIGLDIASLAERQFANQIIMISGDSDFVPAAKHARRSGIDFILDPMWAKIAPSLSEHVDGIRQCVLPPPDNLDDPLHVKVDSEEADFDDEA
>NZ_CP050804.1|WP_168918495.1|1886528_1887305_-|alpha/beta-hydrolase
MRLSVTETGQNVTGIIVAFHGVTDSGASLADLTIYFGDTWQVVLVDSLGHGFSERFSDDDLRDPFTASCEAASAVVKRYAAQAESGRVVMIGHSMGGAIAAWVAVNYPDLVAGVVLEDPAILTACQADHYREAAPELAAGVRGLCADPGQALTDIRVAHPAWSACECAGWVQGKTQVDMRLVESGVVGTTDESLFDKLSVPTLLVAGDRDNILFDVERLASITNPAITVERIAGASHCVRRDQPEKFYDAVDRWMSNQ
>NZ_CP050804.1|WP_168918496.1|1887359_1887818_-|DUF1801-domain-containing-protein
MKRWKVSGDHSMTYGKGEWMRIGPACSFGKPVTVPEFLARLPETIAPDAAELAHIFCDVTGHEPIMWGPAIVGYGETNPGAKPDCLCDGLEIGFAARPDRLFLYLRHYASYYEEFSTRLGNVHCGRACISFASLADVDRAVLRELLTYAWHG
>NZ_CP050804.1|WP_168918497.1|1887993_1889550_+|DASS-family-sodium-coupled-anion-symporter
MRTPITHKSTAISAGSQAQPEIGNTLIRHFLPVVGGLLLGALIYFIFPDAISDQLRETFAAKDMTVTRHDLAITAAIAVVMGLWWMTEAIPLPATALLPLIAFPAFDVVPIKAAAAPYASDTIFLFMGGFFLALTMQRWNLQRRIALITVLLVGTRPKRLILGFMIATGFLSMWVSNTATAVMMLPIGLSILNTVGNVSDDGANPTLRYPKFATALMLGIAYSASIASLSTLIGTPPNVLLRAYLQETHGITLSFGQWMLFAAPMAWTFLLVAWAVLVRIYKPEIDEIPGGKAIIQRELAAMGKMTVQEIMVGVIFVGAGLAWIFLPVIWPETPINDSGIAMIVSLLLFVTPAKPKQGIALLDWDTAKDIPWDILILFGGGLSLSAAFGSSGLSLWIGDHAQILAGLPLVVIVAIVTALVIGLTEMTSNTATAAAFLPIIGAVAIGMGAPVEALVIPVALAATCAFMLPVATPPNAIAYGSGFIKIRQMMKAGMRLNIIGIALITVFTVWVGSLIFGY
>NZ_CP050804.1|WP_168918498.1|1890020_1891814_-|transcriptional-regulator
MRWTVQELENRLNDFRKYSRDTTDIEVKQASELPDNLSNTVCAFANMPEGGTIILGVAENQDFAITGVENAQELFDQVVQQTRNRVVPAPQLEHQILTVDDKDVLIVEVVPVALKCRPVKASGIAYLRQSDGDFRMNESDLALIEIQKLSLTDQYRFDVAPVTNSNVKDLDSGRIKNFLSEIRASSARLAKVGDDQTLLHMLNIVTEEGQLTLAGLYALGVFPQAKAPQLRITAAVTLSSREAGVRSRNRRDFDGALPDLLEDALAWVEANAPRQSRYSSDGNMRDECVYPLVAVRELIANALVHRDLSPNTEGKWVEIRLREDRLVISNPGGLRGVSVEQLQSYTLAKNAVNPRLYDLAKKIHSESGNNVIEGEGSGVQEVFRVTRQALLPKPSLQDTGVQFTAILYAKSVFSSEEAEWLAEVAGNETLTATEKLLLVKMRHGQKISRMQILKEFAPISLAEVDRVLRRLIEFNMIVLADDGGKTAVYGLVEQLIVNLHSQDKVASVSSVHSGLNADMPDIVANSRRVTKNGPVIVRALRSVSKGMTFEELVQQTGLSEGQVRYAIKLMREAGLITQVGGWGVRDTKYYVVEDNTE
>NZ_CP050804.1|WP_168918664.1|1892260_1893529_+|DUF1727-domain-containing-protein
MIGGRVASRIAPNLLRDLTQRMKVVVITGTNGKSTTTRMIAEAVTADGLNVATNRGGDNMLPGVLAAVLQDPKADVAVLEVDEMWVARVAQEVNPDVFVFLNLSRDQLDRVGEIASIERRLRSAIDAHPNATVIANIDDPLMTSAAWDSHNPVWVAAGQGWSGDSLTSPRTGGIIVYGDDERAHTSDSQVPPASGQDSQVWWRAVGLDADLGTSEASTFARPYPDWSWSVAESNYQPGVPMQVHGPDGTTDVVVNLPGRANRSNASQALAAAHALGVNPEVAARCIAGVSSVAGRYANVNIDGRNVRLLLAKNPAGWQESLTMLRPGAALVVGINGQVADGVDLSWLWDVKFSQLASRQVWACGERGADLNVRLHYAGVAADFIADPVDAIQATPPGDVDVLLNYTSFRDTRAALRKRGYEV
>NZ_CP050804.1|WP_168918499.1|1893525_1894344_+|glutamine-amidotransferase
MSLRIGVLLPEVLGTYGDSGNAEILAFRAQARGIDTQIVHVGIDEAIPDSLDIYTLGGGEDIAQTIASRKLASDSGLARAVAAGRPVLAICAALQVLGTYYTDADGKKTAGAGLLDVVTLPQGLRAIGELRSEPGPGLAARGVTDTLYGFENHGGGTALGPDASPFGLVTFGTGNGVPGVAPARTNDSRTPDPKLVLAGTPDGYVTEVDGRRIDGAVQGSVFATYMHGPVLARNPQLADMLIAMATGDALAPLDVPGVADLRAERERFIAGQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP050804_2	2.3\|1880675\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880675-1880702	28	NZ_CP050804.1	720388-720415	0	1.0
NZ_CP050804_2	2.6\|1880867\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880867-1880894	28	NZ_CP050804.1	1195849-1195876	0	1.0

1. spacer 2.3|1880675|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to position: 720388-720415, mismatch: 0, identity: 1.0

acgccaccctggcttactgaacgtgccg	CRISPR spacer
acgccaccctggcttactgaacgtgccg	Protospacer
****************************

2. spacer 2.6|1880867|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to position: 1195849-1195876, mismatch: 0, identity: 1.0

cgcggtatctgggaaatcccggacgttg	CRISPR spacer
cgcggtatctgggaaatcccggacgttg	Protospacer
****************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP050804_2	2.5\|1880803\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880803-1880830	28	NZ_AP014580	Burkholderia sp. RPE67 plasmid p2, complete sequence	179332-179359	5	0.821
NZ_CP050804_2	2.2\|1880611\|28\|NZ_CP050804\|CRISPRCasFinder,CRT	1880611-1880638	28	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	562554-562581	6	0.786
NZ_CP050804_2	2.9\|1881059\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1881059-1881086	28	MN693542	Marine virus AFVG_25M165, complete genome	2040-2067	6	0.786
NZ_CP050804_2	2.4\|1880739\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880739-1880766	28	NZ_CP023721	Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence	227235-227262	7	0.75
NZ_CP050804_2	2.5\|1880803\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880803-1880830	28	NC_047956	Pseudomonas phage Achelous, complete genome	24956-24983	7	0.75
NZ_CP050804_2	2.5\|1880803\|28\|NZ_CP050804\|CRISPRCasFinder,CRT,PILER-CR	1880803-1880830	28	NC_047955	Pseudomonas phage Nerthus, complete genome	24695-24722	7	0.75

1. spacer 2.5|1880803|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014580 (Burkholderia sp. RPE67 plasmid p2, complete sequence) position: , mismatch: 5, identity: 0.821

ctggccttgcacttgttgcatttcgatc	CRISPR spacer
cgcaccttgccctcgttgcatttcgatc	Protospacer
*  .****** **.**************

2. spacer 2.2|1880611|28|NZ_CP050804|CRISPRCasFinder,CRT matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.786

cctgaacagctccatgcgaatactcgat	CRISPR spacer
tccatacagctccatgcgaatcctcgac	Protospacer
.*.. **************** *****.

3. spacer 2.9|1881059|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to MN693542 (Marine virus AFVG_25M165, complete genome) position: , mismatch: 6, identity: 0.786

tagaagaagctatcgaacagattggcgc	CRISPR spacer
gttgagaagctatctaaaagattggcgc	Protospacer
   .********** ** **********

4. spacer 2.4|1880739|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023721 (Rhodococcus sp. H-CA8f plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.75

gctgcggcgcgaaccagaagcagaagct	CRISPR spacer
gcagcggcgcgcaccagaagcaggtcga	Protospacer
** ******** ***********.

5. spacer 2.5|1880803|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to NC_047956 (Pseudomonas phage Achelous, complete genome) position: , mismatch: 7, identity: 0.75

ctggccttgcacttgttgcatttcgatc	CRISPR spacer
ggtgccttgcacttgttgcaggtcgaag	Protospacer
   *****************  ****

6. spacer 2.5|1880803|28|NZ_CP050804|CRISPRCasFinder,CRT,PILER-CR matches to NC_047955 (Pseudomonas phage Nerthus, complete genome) position: , mismatch: 7, identity: 0.75

ctggccttgcacttgttgcatttcgatc	CRISPR spacer
ggtgccttgcacttgttgcaggtcgaag	Protospacer
   *****************  ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

572696 : 598713

Erysipelothrix_phage(42.86%)

terminase,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168917442.1\|572696_573269_+\|terminase	P27 family phage terminase small subunit	A0A2K5B277	Erysipelothrix_phage	1.2e-48	49.7
WP_168917443.1\|574508_575756_+	DNA modification methylase	A0A2I4R670	Erysipelothrix_phage	6.7e-137	59.2
WP_168917444.1\|575835_576852_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168916999.1\|577299_577479_+	hypothetical protein	NA	NA	NA	NA
WP_168917445.1\|577478_577673_+	hypothetical protein	NA	NA	NA	NA
WP_168917446.1\|577782_579387_+\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	5.8e-242	76.4
WP_168917447.1\|579454_580105_-	hypothetical protein	NA	NA	NA	NA
WP_168917448.1\|581812_582358_-	hypothetical protein	NA	NA	NA	NA
WP_168917449.1\|582948_583671_+	hypothetical protein	NA	NA	NA	NA
WP_168917450.1\|583700_583928_+	hypothetical protein	NA	NA	NA	NA
WP_168917451.1\|584573_585269_-	response regulator transcription factor	NA	NA	NA	NA
WP_168917452.1\|585265_586009_-	sensor histidine kinase	NA	NA	NA	NA
WP_168917453.1\|586135_586819_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.1e-21	33.5
WP_168917454.1\|586815_588210_+	hypothetical protein	NA	NA	NA	NA
WP_168917455.1\|588215_588593_-	hypothetical protein	NA	NA	NA	NA
WP_168917456.1\|588747_590607_+	phosphoenolpyruvate carboxykinase (GTP)	NA	NA	NA	NA
WP_168917457.1\|590735_591572_+	YdcF family protein	NA	NA	NA	NA
WP_168917458.1\|591787_592021_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_168917459.1\|592031_592199_+	50S ribosomal protein L33	NA	NA	NA	NA
WP_168917460.1\|592310_593195_-	hypothetical protein	NA	NA	NA	NA
WP_168917461.1\|594118_595657_+	trigger factor	NA	NA	NA	NA
WP_168917462.1\|595944_596586_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	7.4e-47	52.6
WP_168918575.1\|596636_597284_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	4.2e-34	43.0
WP_168917463.1\|597429_598713_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.2e-125	55.2

DBSCAN-SWA_2

1132749 : 1188729

Klosneuvirus(22.22%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168917877.1\|1132749_1133277_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	8.2e-12	32.1
WP_168917878.1\|1133601_1133781_+	XamI family restriction endonuclease	NA	NA	NA	NA
WP_168917879.1\|1134050_1134245_+	XamI family restriction endonuclease	NA	NA	NA	NA
WP_168917880.1\|1134322_1134904_-	sulfopyruvate decarboxylase subunit beta	NA	NA	NA	NA
WP_168917881.1\|1134920_1135400_-	hypothetical protein	NA	NA	NA	NA
WP_168917882.1\|1135405_1136635_-	MFS transporter	NA	NA	NA	NA
WP_168917883.1\|1136644_1137736_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168917884.1\|1138448_1139486_-	YncE family protein	NA	NA	NA	NA
WP_168917885.1\|1140383_1141754_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.4e-90	43.0
WP_168917886.1\|1142219_1142645_+	hypothetical protein	NA	NA	NA	NA
WP_168917887.1\|1143944_1144766_+	HNH endonuclease	A0A1S6L216	Vibrio_phage	5.8e-12	32.7
WP_168917888.1\|1145083_1145740_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_168917889.1\|1145752_1146220_-	ribosome silencing factor	NA	NA	NA	NA
WP_168917890.1\|1146256_1147216_-	hypothetical protein	NA	NA	NA	NA
WP_168917891.1\|1147208_1147946_-	nicotinate-nucleotide adenylyltransferase	G3MA22	Bacillus_virus	5.5e-14	28.6
WP_168917892.1\|1148128_1148494_+	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	2.5e-15	34.3
WP_168917893.1\|1148570_1149518_-	hypothetical protein	NA	NA	NA	NA
WP_168917894.1\|1149782_1151315_-	GTPase ObgE	NA	NA	NA	NA
WP_013170278.1\|1151411_1151669_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_168917895.1\|1151718_1152024_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_168918619.1\|1152182_1154678_-	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_168917896.1\|1155172_1156672_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_168917897.1\|1156689_1157829_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_168917898.1\|1157882_1158242_-	hypothetical protein	NA	NA	NA	NA
WP_168917899.1\|1158572_1159439_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_168917900.1\|1161796_1163458_+	thiol reductant ABC exporter subunit CydD	NA	NA	NA	NA
WP_168917901.1\|1163454_1165212_+	thiol reductant ABC exporter subunit CydC	A0A1V0SJ29	Klosneuvirus	2.9e-13	24.3
WP_168917902.1\|1165216_1166857_+	GAF domain-containing protein	NA	NA	NA	NA
WP_168918620.1\|1166909_1167533_-	response regulator transcription factor	NA	NA	NA	NA
WP_168917903.1\|1168422_1169133_-	ribonuclease III	A0A2K9L8W0	Tupanvirus	8.0e-18	26.4
WP_168917904.1\|1169132_1169711_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_168917905.1\|1169716_1170223_-	ATP synthase F0 subunit B	NA	NA	NA	NA
WP_168917906.1\|1170219_1170696_-	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	3.6e-22	36.9
WP_168917907.1\|1170700_1171312_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_168917908.1\|1171277_1173509_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_168917909.1\|1173745_1173937_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_168917910.1\|1174023_1175001_-	thiamine-phosphate kinase	NA	NA	NA	NA
WP_091280909.1\|1175008_1176127_-	D-alanine--D-alanine ligase	NA	NA	NA	NA
WP_168917911.1\|1176171_1176999_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_168917912.1\|1177019_1178342_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_091280900.1\|1178548_1179280_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_168917913.1\|1179289_1180423_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_168917914.1\|1180489_1182508_+	M3 family metallopeptidase	A0A1V0SID3	Klosneuvirus	1.4e-30	22.4
WP_168917915.1\|1182567_1183491_-	phospholipase	NA	NA	NA	NA
WP_168917916.1\|1184006_1184714_-\|transposase	transposase	NA	NA	NA	NA
WP_168917917.1\|1184667_1184901_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_168917918.1\|1185306_1185939_-	hypothetical protein	NA	NA	NA	NA
WP_168917917.1\|1186368_1186602_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_168917916.1\|1186555_1187263_+\|transposase	transposase	NA	NA	NA	NA
WP_168917919.1\|1187418_1188729_+\|transposase	ISL3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1196989 : 1239366

Propionibacterium_phage(31.58%)

tail,terminase,portal,protease,integrase,holin

attL 1194684:1194708|attR 1230910:1230934

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1194684:1194708	attL	NA	NA	NA	NA
WP_168917931.1\|1196989_1197238_-\|holin	holin	A0A1W6JRG0	Corynebacterium_phage	6.4e-07	54.3
WP_168917932.1\|1197248_1198112_-	CHAP domain-containing protein	A0A2P1CIB7	Actinomyces_phage	9.3e-53	47.0
WP_168917933.1\|1198322_1198640_-	hypothetical protein	NA	NA	NA	NA
WP_168918621.1\|1198644_1199406_-	collagen-like protein	NA	NA	NA	NA
WP_168917934.1\|1199915_1200458_-	hypothetical protein	NA	NA	NA	NA
WP_168917935.1\|1200503_1200665_-	hypothetical protein	NA	NA	NA	NA
WP_168917936.1\|1200664_1203490_-	hypothetical protein	NA	NA	NA	NA
WP_168917937.1\|1203477_1204260_-	hypothetical protein	NA	NA	NA	NA
WP_168917938.1\|1204273_1206460_-	tape measure protein	A0A0U3TMF4	Arthrobacter_phage	1.0e-63	48.1
WP_168917939.1\|1206477_1206780_-	DUF5361 domain-containing protein	NA	NA	NA	NA
WP_168917940.1\|1206863_1207160_-	hypothetical protein	NA	NA	NA	NA
WP_168917941.1\|1207320_1207881_-\|tail	phage tail protein	A0A141E164	Streptococcus_phage	2.2e-39	47.0
WP_168917942.1\|1207873_1208254_-	hypothetical protein	NA	NA	NA	NA
WP_168917943.1\|1208250_1208490_-	hypothetical protein	NA	NA	NA	NA
WP_168917944.1\|1208492_1208828_-	hypothetical protein	NA	NA	NA	NA
WP_168917945.1\|1208824_1209202_-	hypothetical protein	A0A1D8ETI1	Propionibacterium_phage	3.7e-22	51.3
WP_168917946.1\|1209208_1209448_-	hypothetical protein	NA	NA	NA	NA
WP_168917947.1\|1209523_1210495_-	DUF5309 domain-containing protein	A0A1D8ETI7	Propionibacterium_phage	1.1e-99	56.9
WP_168917948.1\|1210509_1211058_-	hypothetical protein	A0A1D8EU51	Propionibacterium_phage	9.1e-22	43.3
WP_168917949.1\|1211919_1213311_-\|portal	phage portal protein	A0A1D8ETN4	Propionibacterium_phage	1.7e-144	58.0
WP_168917950.1\|1213314_1214787_-\|terminase	terminase	A0A1D8EU11	Propionibacterium_phage	1.4e-109	46.0
WP_168917951.1\|1214758_1215070_-	hypothetical protein	A0A222ZR10	Mycobacterium_phage	2.6e-05	44.7
WP_168918622.1\|1215256_1215562_-	HNH endonuclease	A0A2K9VIL1	Propionibacterium_phage	1.3e-22	55.3
WP_168917952.1\|1215726_1216332_-	hypothetical protein	NA	NA	NA	NA
WP_168917953.1\|1216425_1216875_-	hypothetical protein	NA	NA	NA	NA
WP_168917954.1\|1217149_1218526_-	DEAD/DEAH box helicase	A0A1L6BZE2	Pasteurella_phage	2.4e-143	55.3
WP_168917955.1\|1218506_1218788_-	VRR-NUC domain-containing protein	A0A2K5B272	Erysipelothrix_phage	7.0e-18	47.8
WP_168917956.1\|1219261_1221730_-	DNA primase	A0A0A7RWN8	Mycobacterium_phage	5.0e-83	40.8
WP_168917957.1\|1221839_1222517_-	hypothetical protein	NA	NA	NA	NA
WP_168917958.1\|1222546_1223314_-	hypothetical protein	NA	NA	NA	NA
WP_168917959.1\|1223310_1223619_-	hypothetical protein	NA	NA	NA	NA
WP_168917960.1\|1223615_1223810_-	hypothetical protein	NA	NA	NA	NA
WP_168917961.1\|1223806_1224154_-	hypothetical protein	NA	NA	NA	NA
WP_168917962.1\|1224153_1224351_-	hypothetical protein	NA	NA	NA	NA
WP_168917963.1\|1224480_1224639_-	hypothetical protein	NA	NA	NA	NA
WP_168917964.1\|1224631_1225291_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_168917965.1\|1225290_1225476_-	hypothetical protein	NA	NA	NA	NA
WP_168917966.1\|1225478_1225727_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168917967.1\|1225815_1226595_-	phage antirepressor Ant	A0A0C5AEJ9	Bacteriophage	1.4e-76	56.5
WP_168917968.1\|1226857_1227376_-	hypothetical protein	NA	NA	NA	NA
WP_168917969.1\|1227605_1227842_-	hypothetical protein	NA	NA	NA	NA
WP_168917970.1\|1227960_1228344_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168917971.1\|1228357_1228735_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_168917972.1\|1228780_1229215_+	hypothetical protein	NA	NA	NA	NA
WP_168917973.1\|1229340_1229556_+	transcriptional regulator	A0A2K9VEW2	Mycobacterium_phage	1.3e-11	47.4
WP_168917974.1\|1229602_1230823_-\|integrase	site-specific integrase	A0A2P1JR65	Mycobacterium_phage	2.6e-40	31.0
WP_168917975.1\|1231095_1231575_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
1230910:1230934	attR	NA	NA	NA	NA
WP_168917976.1\|1231611_1231926_-	hypothetical protein	NA	NA	NA	NA
WP_168917977.1\|1232057_1232588_+	DUF4916 domain-containing protein	NA	NA	NA	NA
WP_168917978.1\|1232590_1233220_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	A0A0P0A2M4	Ugandan_cassava_brown_streak_virus	6.0e-09	28.9
WP_168917979.1\|1233219_1233963_-	ribonuclease PH	NA	NA	NA	NA
WP_168917980.1\|1234089_1234506_-	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_168917981.1\|1234638_1234971_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168917982.1\|1235484_1236681_-	Fic family protein	Q9AZ49	Lactococcus_phage	9.9e-45	31.2
WP_168917983.1\|1236825_1237626_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_168917984.1\|1237638_1238487_-	glutamate racemase	NA	NA	NA	NA
WP_168917985.1\|1238497_1239178_-	DUF2017 family protein	NA	NA	NA	NA
WP_168918623.1\|1239177_1239366_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA

DBSCAN-SWA_4

1490807 : 1498447

Streptomyces_phage(16.67%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168918183.1\|1490807_1491494_+	DNA polymerase III subunit epsilon	Q1WDI5	Streptomyces_phage	1.1e-45	43.0
WP_168918184.1\|1491557_1493102_-	alkyl hydroperoxide reductase subunit F	G3MA85	Bacillus_virus	1.4e-35	29.1
WP_168918185.1\|1493105_1493669_-	peroxiredoxin	NA	NA	NA	NA
WP_168918186.1\|1493857_1495024_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.3e-62	34.8
WP_168918637.1\|1495261_1495546_+	WhiB family transcriptional regulator	A0A097EYN9	Mycobacterium_phage	2.1e-09	36.1
WP_168918187.1\|1495632_1495929_-	co-chaperone GroES	A0A221S4M3	uncultured_virus	7.4e-18	49.5
WP_168918188.1\|1496124_1497330_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_168918189.1\|1497403_1498447_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	9.5e-60	39.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP050804

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection