CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP051471	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10B, complete sequence	0 crisprs	NA	0	0
NZ_CP051473	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence	0 crisprs	csa3	0	0
NZ_CP051469	Rhodobacter sphaeroides strain CH10 chromosome 2, complete sequence	0 crisprs	csa3	0	5
NZ_CP051472	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10C, complete sequence	0 crisprs	NA	0	0
NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	1 crisprs	NA	1	1
NZ_CP051468	Rhodobacter sphaeroides strain CH10 chromosome 1, complete sequence	2 crisprs	cas3,DEDDh,csa3	1	8

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051470_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051470_1

19453-19531

Orphan

Consensus_repeat	Method
GATTTGTTTCGCGCGCGAAACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051470_1

>merge|NZ_CP051470|1|19453-19531|CRISPRCasFinder
GATTTGTTTCGCGCGCGAAACAATTTGCCCCCGCCGTGCCGCCCTGCCGACCCCCCGATTTGTTTCGCGCGCGAAACAA

>NZ_CP051470|1|1|19453-19531|CRISPRCasFinder
GATTTGTTTCGCGCGCGAAACAA	TTTGCCCCCGCCGTGCCGCCCTGCCGACCCCCC
GATTTGTTTCGCGCGCGAAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051470.1\|WP_002724800.1\|17186_18008_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213187
NZ_CP051470.1\|WP_011836182.1\|25310_26162_+\|dTDP-4-dehydrorhamnose-reductase	unknown	unknown	gnl\|CDD\|367904
NZ_CP051470.1\|WP_011836242.1\|6646_7588_-\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP051470.1\|WP_011836243.1\|7769_9071_-\|DUF2793-domain-containing-protein	unknown	unknown	gnl\|CDD\|371324
NZ_CP051470.1\|WP_050988687.1\|19546_20953_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|274585
NZ_CP051470.1\|WP_011836183.1\|27023_27806_-\|deacetylase-sulfotransferase	unknown	unknown	gnl\|CDD\|366246
NZ_CP051470.1\|WP_002724803.1\|21691_22654_+\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|370826
NZ_CP051470.1\|WP_009565041.1\|23706_24270_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	unknown	unknown	gnl\|CDD\|376414
NZ_CP051470.1\|WP_011836181.1\|24273_25314_+\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
NZ_CP051470.1\|WP_011836241.1\|5208_6531_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051470.1\|WP_002724804.1\|22704_23643_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133039
NZ_CP051470.1\|WP_002724798.1\|14501_15302_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224596
NZ_CP051470.1\|WP_011836245.1\|12182_14438_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379549
NZ_CP051470.1\|WP_002724637.1\|29099_29936_+\|3-deoxy-8-phosphooctulonate-synthase	unknown	unknown	gnl\|CDD\|235363
NZ_CP051470.1\|WP_011836244.1\|9673_11032_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226081
NZ_CP051470.1\|WP_009565051.1\|11189_12182_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051470.1\|WP_002724812.1\|26158_27049_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	unknown	unknown	gnl\|CDD\|130274
NZ_CP051470.1\|WP_011836184.1\|28172_28898_-\|sulfotransferase	unknown	unknown	gnl\|CDD\|379204
NZ_CP051470.1\|WP_017140428.1\|16030_17170_+\|sugar-transporter	unknown	unknown	gnl\|CDD\|226055
NZ_CP051470.1\|WP_011836179.1\|18306_19422_-\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274586

Protein	Function_ID	Function_description	E-value
NZ_CP051470.1\|WP_002724800.1\|17186_18008_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213187	cd03220, ABC_KpsT_Wzt, ATP-binding cassette component of polysaccharide transport system. The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenza) and a cytoplasmic membrane protein MPA2.	1.78218e-89
NZ_CP051470.1\|WP_011836182.1\|25310_26162_+\|dTDP-4-dehydrorhamnose-reductase	gnl\|CDD\|367904	pfam04321, RmlD_sub_bind, RmlD substrate binding domain. L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesized by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide.	1.37587e-123
NZ_CP051470.1\|WP_011836242.1\|6646_7588_-\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	2.71163e-15
NZ_CP051470.1\|WP_011836243.1\|7769_9071_-\|DUF2793-domain-containing-protein	gnl\|CDD\|371324	pfam10983, DUF2793, Protein of unknown function (DUF2793). This is a bacterial family of proteins with unknown function.	3.80205e-32
NZ_CP051470.1\|WP_011836183.1\|27023_27806_-\|deacetylase-sulfotransferase	gnl\|CDD\|366246	pfam00685, Sulfotransfer_1, Sulfotransferase domain.	7.28903e-11
NZ_CP051470.1\|WP_050988687.1\|19546_20953_-\|AAA-family-ATPase	gnl\|CDD\|274585	TIGR03453, partition_RepA, plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error. [Mobile and extrachromosomal element functions, Plasmid functions].	4.83014e-59
NZ_CP051470.1\|WP_017140428.1\|16030_17170_+\|sugar-transporter	gnl\|CDD\|226055	COG3524, KpsE, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	1.37396e-72
NZ_CP051470.1\|WP_009565041.1\|23706_24270_+\|dTDP-4-dehydrorhamnose-3,5-epimerase	gnl\|CDD\|376414	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase. This family catalyze the isomerisation of dTDP-4-dehydro-6-deoxy -D-glucose with dTDP-4-dehydro-6-deoxy-L-mannose. The EC number of this enzyme is 5.1.3.13.	5.08975e-99
NZ_CP051470.1\|WP_011836181.1\|24273_25314_+\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP051470.1\|WP_002724804.1\|22704_23643_+\|glycosyltransferase	gnl\|CDD\|133039	cd04196, GT_2_like_d, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.06441e-72
NZ_CP051470.1\|WP_002724798.1\|14501_15302_-\|ABC-transporter-permease	gnl\|CDD\|224596	COG1682, TagG, ABC-type polysaccharide/polyol phosphate export systems, permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	2.5419e-33
NZ_CP051470.1\|WP_011836245.1\|12182_14438_-\|hypothetical-protein	gnl\|CDD\|379549	pfam14307, Glyco_tran_WbsX, Glycosyltransferase WbsX. Members of this family are found in within O-antigen biosynthesis clusters in Gram negative bacteria, where they are predicted to function as glycosyltransferases.	9.36814e-151
NZ_CP051470.1\|WP_002724637.1\|29099_29936_+\|3-deoxy-8-phosphooctulonate-synthase	gnl\|CDD\|235363	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional.	0
NZ_CP051470.1\|WP_011836244.1\|9673_11032_+\|hypothetical-protein	gnl\|CDD\|226081	COG3551, COG3551, Uncharacterized protein conserved in bacteria [Function unknown].	4.52734e-49
NZ_CP051470.1\|WP_002724812.1\|26158_27049_+\|glucose-1-phosphate-thymidylyltransferase-RfbA	gnl\|CDD\|130274	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form. Alternate name: dTDP-D-glucose synthase homotetramer This model describes a tightly conserved but broadly distributed subfamily (here designated as short form) of known and putative bacterial glucose-1-phosphate thymidylyltransferases. It is well characterized in several species as the first of four enzymes involved in the biosynthesis of dTDP-L-rhamnose, a cell wall constituent and a feedback inhibitor of the enzyme. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.32712e-162
NZ_CP051470.1\|WP_011836184.1\|28172_28898_-\|sulfotransferase	gnl\|CDD\|379204	pfam13469, Sulfotransfer_3, Sulfotransferase family.	2.53227e-11
NZ_CP051470.1\|WP_002724803.1\|21691_22654_+\|replication-initiator-protein-A	gnl\|CDD\|370826	pfam10134, RPA, Replication initiator protein A. Members of this family of bacterial proteins are single-stranded DNA binding proteins that are involved in DNA replication, repair and recombination.	2.32126e-121
NZ_CP051470.1\|WP_011836179.1\|18306_19422_-\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|274586	TIGR03454, partition_RepB, plasmid partitioning protein RepB. Members of this family are the RepB protein involved in replicon partitioning. RepB is found, in general, as part of a repABC operon in plasmids and small chromosomes, separate from the main chromosome, in various bacteria. This model describes a rather narrow clade of proteins; it should be noted that additional homologs scoring below the trusted cutoff have very similar functions, although they may be named differently. [Mobile and extrachromosomal element functions, Plasmid functions].	9.68349e-12

>NZ_CP051470.1|WP_011836179.1|18306_19422_-|ParB-N-terminal-domain-containing-protein
MAKRKRLTLPPLGGFAPGPASASEASPAPASPPALGPGLAPAPISRVTGEAAATAALREVAEELGAARSEGRLVLRLELDRIEEGWLVRDRIGLEAEELASLMTSLSAHGQRSPIEVTDMGEGRFGLISGWRRVTALRRLHAETGEERFATVLALLRRPDTAAAAYVAMVEENEIRAGLSYFERARIAAKAVEAGVFATDKLALQQLYGSASRAKRSKIGSFLGIYRALEGALRYPSALPERLGLALARRLEEEPGVAAKITAALAAAAPDSAEAELALIADLLAPAAEAAPEQEPARPSAPDPAPDAPAPAPAPDPAPAQPRSTRPPAPAAELRPGLFLKAEGAGSLHLYGPAVDETFRARLRDWLASEG
>NZ_CP051470.1|WP_002724800.1|17186_18008_+|ABC-transporter-ATP-binding-protein
MIELRNVSKSYVLNGTRKVVARDLNFTFPSGESVGLLGRNGAGKSSLLRMLAGTMLPDTGEILSSGTISWPVGFSGSFHPELTGAQNVRFVARLYGVDTEAMIAFVRDFAEIGQHFHLPVRSYSSGMRSRLAFGISMAVPFDTYLIDEVTAVGDAAFSAKSNAILRARLEESGAVIVSHSMPLLKKLCRSGAVLHDGQLFYYERIEQAIRHHESMMRGALPRWMRGDLDEGEGEEAGAAAPGPRARARAGAARAGGGRAARPGPASGTSEPRG
>NZ_CP051470.1|WP_017140428.1|16030_17170_+|sugar-transporter
MPAAAPRAAARLRHHGLLASFLGLVLAPILASGLYLFAIAEDQYTSTVGFSVRTEEMGSALDLLGGLSSFGLTGGGSASDSDILYQFIQSQELVQRINERIDLRAIYSKPGFDPVFSFDPDGGIEDLVDYWKDMVRISYDSTTGLIELRVHAFTPEDAQAVAQGILDESNRMINDLSAIARADATRYAREELDNAVERLRVQRVAMTEFRSRTQIVDPSADIQAQMGLLNTLQQQLASASIDLNLLRQTTQPSDPRIAQNERRIGVIEELIQREREKFGLGGGTGTGASTYSTMIAEFERLTVDLDFAEKAYIAALTNHDAAIAEAQRMSRYLATYVRPTLAQQSLYPQRGLLTLMIGGFALMLWAIGMLIYYSVRDRR
>NZ_CP051470.1|WP_002724798.1|14501_15302_-|ABC-transporter-permease
MTGLSGLLAGRRFLWGRSVLSLMLREMATSYGRSPGGYLWAVAEPVAALTLLTVVFSFLMRSPPLGNNFPLFYATGYLPFMYYTALTAKIGQAIRFSRPLLAYPAVSFFDAILSRFLLNTLTNLVVFVIVMVGIIAFYDLNVSLDLPAILEAFSMAAALAMGVGTLNCYLFSVAPVWERVWAILNRPMFLLSGIFFLMETVPEPFRTLLSYNPLTHVIAKMRQGFFATYDARLVDPLYAYSVSLVCLFFGMLLLNRHHRMLLNEGA
>NZ_CP051470.1|WP_011836245.1|12182_14438_-|hypothetical-protein
MLKFHRLRRFARILVLTGEERRYLRAIRKSGLFDRTYYRGAYPGLNPIYLKYPEKHYIAYGERLGYRPNPDFSPQAYLRYHPDVAEAGVPPFLHYVRVGHAEQRLTKELPEVVALPARGMPQVRFEHGRQTAPYAVAVHVYYPDLWPEFAARLRRLRIPFDLYVTLTYRGEETDALAEEIRADFPGAFVTPMPNRGRDILPFVTLLNAGAFDGYRAVCKFHTKKSPHRQDGDLWRKHLIEGILPETGLEEKLEAFVEAPEAGFWVADGQHYTGTQWWGSNVEATRHLLQRIEIPLDREALSFPAGSIYWVKPLVLGLLRSLQLRLEDFDLEEGQVDGTLAHAIERVLGYLTARAGQKVLQTSELRPAAAAAPAKPAFVSAFYLPQFHPVPENDAWWGKGFTEWRSVVKAPSMFEGHLQPMLPADLGFYDLRATEVMGEQAAMAREAGIDAFCVYHYWFDGRRILEAPIDRLMARPEIDFPFYLCWANESWRRNWDGLSGTVLLEQTYGAGFEEKLAADTAPYLRDPRYARPDGRRPRFVIYRPEDMPDPQASVARLREGWRRAGIGEVELGAVRFHVEGAHPVPEGLFDFWVEMPPHGLVKGPDYLFGGPDGNRMPAAMNPAFSGLIYDYAAVARRALSETYVRTLPKATIAGVMPGWDNTARRGAAGHVAYGANPATFNVWLAGALERRVPASYRRELFVNAWNEWAEKAVLEPSLTFGDLNLQVMRQHLGAAEPATHLAEPPAHGMRSH
>NZ_CP051470.1|WP_009565051.1|11189_12182_-|hypothetical-protein
MARVVLHIGTHKTATTTIQDMFAHNADLLRQHGVIYPRLSRVAGHHGLVMEWNKLPDMYALPQGSIATLKQLTRDYAHVPGTLVLSSEEFSRGKPGAQVDFRAVRELLSDFESVSVVCVLREQWQFMQSIYLQASKERQPPKPSTMVDSVLKRDMTDGLWIDYNLLYDHLLSAFAPEEITFLDFDACRRHRDGVVGAMLDTLGCGLSASSLQVVHDGLSNVSPLALPTFAACVITEPDQAAPWVIDCATGAFRIEYGEEAKSCLWTYPEFQQLFAYAKERNGRLSERRKAVQPEFRISESDPEENRVYRDGLNTSFWIRCSRWIYRARRG
>NZ_CP051470.1|WP_011836244.1|9673_11032_+|hypothetical-protein
MTSDQTPARPALLVLGMHRSGTSALAGVLGRAGFALPQELMPPTEHNPRGYFESTRIFRLNDALLAAAGSSWDDWRAFDADWHLSPAAEPFHAEAQEALAAEFPGTAPIVLKDPRICRLLPFWTRALTEAGFRPLAVCTHRPAREVGASLARRNGWPEARGLLLWLRHVLDAEAQTRGRPRVFVSYDGLLADWRGTLGRIAEAFDLALPRPLDEAAPEIEAFLSADLRHAPETPAAAAGLSDWIARPEEILDRKAAGEDRPGDRETLDRIAAEVAAAAPLLADLSGAVEEQGARLEREAALRHEAQTILQQERQRLDDLTAELQLQLHHRTLHVAELERHAGELAQQLRQKTQHAAELERHAEELAQQLRQQRSHAAELERHAGELSALTHELRQQVHHKGRHVQELEAHSGELEARLLALEAEHAALLGSTSWKVTHPLRRMSLALRRPKT
>NZ_CP051470.1|WP_011836243.1|7769_9071_-|DUF2793-domain-containing-protein
MSDASPILSLPYILPSQAQKHVTHNEALQRLDVLVQPAVLDRDRSAPPAAPAAGARHLVGPGAEGAWAGREEAFAVWDAEAAVWRFLAPQPGWQTFVLAEGAGLVFTAQGWRTLIGLLPEFPSLGIATSADATNRLAVAGPATLFTHAGASHRIKVNKAAEAETASLLFQSDWSGRAEIGLAGSDDFALKVSPDGTSFRTALSADRASGRVALPQGAVVTGSLTGSAVQASAADATPGRLLTVGAFGLGAPAPLVGNAGAVDGALAPGFYGYDSAQGSSGGPAGVQAGLLLHQSRGAGEVQLFLVEAGGGGLMPGILFSRARGEGAWSPWVAGGIVESAGNANGRYIRHQDGTQSCWQKVTTSASADVVAPFPAAFSTATGLVTVSSVVSNGAQALSPRLTGRTTTSVGVSVFSATNTRLAAQVELISMGRWY
>NZ_CP051470.1|WP_011836242.1|6646_7588_-|calcium-binding-protein
MPEVSPFPSLSPLSAPLAQSALAQTPAGTPGNDLLNGGPGADRLVGGDGNDTINGRDGVDRLYGGDGDDLLDGGFYHDACYGQAGNDTFRIRGVDLADDVYGGAGTDTLDLSGYTNLRLGFRVDLAAGRYDFRPEPFGPYVVKSIEIVIGSARADVLLGSRLAETLSGGLGNDRLEGRGGADVLRGMEGADALFGGTGNDLLLGGAGNDRLDGQWERDVLVGGAGNDILIGGGGADRFVFAGNFGRDRIRDFSPDMEGEWIDLRGVGAITGFGDLMANHLSEVNGHVVIEVGANRITLEGISSEMLTRDDFLF
>NZ_CP051470.1|WP_011836241.1|5208_6531_-|hypothetical-protein
MTLLRTTLLTALLSLALGAGAEAAPEAIYGPGPRALDNREIFAAANLPLWQELDRAGVEGIVLNASFLMTTDFRGIGAKGEKRRPDDTYLTDADLGGLAAIVARTGLQVTYEAGVGLSGARCDASLSPEALGRAAAAFEFERNVRRLTDAGIPVSAINVDGPMLRLLPDSDKPAGCRETAGAGFDVRSAGQIVHAYMVELRDRIEAAQEKQTVQVRWLVNLPLWQVGRVPRNPVYSEPTPDAKPTTDLTDAVRSLAKAQAEQELPGRALEIAEVVIGYPYSMGKQNPNRYAIRVRNLWLSSRALNPRSGHPPPLGFIVNTHSYLNPCLKREGRPDVAFLTFRRGKGSVSEACQRAQIGEDTVANAQDGAMDNDADYLRDSFTYADELSPGGELARQLVLRDGTRIADHVAHIYYQSWGVNPLSNAWYMERLIERLEHGDR
>NZ_CP051470.1|WP_050988687.1|19546_20953_-|AAA-family-ATPase
MRKSPPAREPQVPLPPYFNISPDAALAELEAPLTTAGFAEIARSCAQGRDDLAARGLDAEGRRSLRLFSTWEITRYLIPVATAHFRRVLKANPDLPQGISETEGGAKWFTLDEVLRLRAHFAAEGSKAKEYRPYRPAGLPAKLVAVANFKGGVGKTSTAAHLAMSAALDGYRVLVIDLDSQGSMTSIFGGRVADEWGTVFPLLARHYAAHLQAENRARVARGDPPVPMDETLTEAQKIRAGDLIAKTHWPNIDLIGAQLNLYWAEFQIPVWRMQGRSWKLWDALTDVLAEDGVLDRYDVIFLDTPPALGYLTINGLAAADILLVPLGASFLEFDSTGRFFDMLHSTFRSIEEGENIAARALGREELAFEWDAVRAVLTRYDGAQQAEMAALMQAYMGRTMAPERQDFTALIGQAGEQVNGIYEADYRDFNRDTYIRGRETFDATYAAFKRLLVGIWRREELAAADAAE
>NZ_CP051470.1|WP_002724803.1|21691_22654_+|replication-initiator-protein-A
MADFFICDILDALPKDDMASMEHPVFSLATRPDLRVLDYAHNGVRITVTPSVRGLATLFDKDILIYCVSQLMAALNAGRAISRTLHLTAHDLMTATHRETSGDGYQRLREAFERLAGTRITTNMEVGGREITTGFGLIESWQIVRRSRGGRMVQVMVTLSEWLFQAVLTKSVLTLSRDYFRLRKPLERRIYELARKHCGQQPEWRVSIATLAKKSGSASPLRVFRKMIRDMIAADSLPGYSLAEEPGDLLCVTRRAAVLAPGLAPALRDTTLERVRARMPGWDVHALVAEWHAFWHSSGQPRLRSADAAFLGWIERRVPG
>NZ_CP051470.1|WP_002724804.1|22704_23643_+|glycosyltransferase
MTDAPPPRIALLLATYNGAANLEAQLESFAAQTLRPTWLVVSDDGSTDATRALLAAFAARHPWLALRLVEGPCRGSAQNFLHLLGQVPPEADMAALSDQDDVWLPEKLARGAAAMADLPADLPVLYGGSSWICDAELGNRRPYPLPVRPPGFRHALVQNIAGGNTMMLNRGAIALLAAASREPERIVVHDWWIYQIVSGAGGRVIFDPVPLLLYRQHGGNLIGANDGFRAKYRRLRMLLSGGFRQWNAINIRALSASAHRFTPENRRLLAEFEALRRAGPWGRLRQLKRIGLYRQGLPGRLSLWLAAVLGRI
>NZ_CP051470.1|WP_009565041.1|23706_24270_+|dTDP-4-dehydrorhamnose-3,5-epimerase
MQIEETELPGVLILTPRVFGDARGSFCEAWNRATLQGLGIDLDFVQDNQSISAPVGTVRGLHYQAPPHAQDKLVRVGHGAILDVAVDVRVGSPTYGRWVGVELTAGNARQLLVPKGFLHGFVTREPDTVVLYKTTDVYAPDCDGAVHFADPDLGIDWGIDPASAVLSDKDARAPRFADWTSPFSIEV
>NZ_CP051470.1|WP_011836181.1|24273_25314_+|dTDP-glucose-4,6-dehydratase
MKLIVTGGAGFIGSAVVRKAVADGHHVVNLDCLTYAACLDNLASVAGAPNYVFEKADIRDAEAMARIFATHRPDAVMHLAAESHVDRSIDGPGAFIDTNVRGTYVLLEAARAYWVGQGKPQGFRFHHISTDEVFGTLGETGQFTEETPYAPNSPYSASKAASDHLVRAWGETYGLPYVLTNCSNNYGPFHFPEKLIPVVILKALAGAPIPVYGKGENVRDWLYVEDHADALLTVLARGENHRSYNIGGENEAKNIDIVRKICAILDARRPKATPYADQIAFVTDRPGHDLRYAIDPTRIRTELGWRPSVTLDEGLERTVDWYLANEPWWRALQDRAGVGERLGVKA
>NZ_CP051470.1|WP_011836182.1|25310_26162_+|dTDP-4-dehydrorhamnose-reductase
MILVFGRTGQVARELARQAPDARFLGRDEADLADPEACARAIREAKPDAVINAAAWTAVDRAEEEEAPATVVNGEAPGAMARACAELGIPFVQISTDYVFDGSGTRPWQPGDPVGPLGAYGRSKLAGEEAVRAAGGPHAILRTSWVFSAHGANFVKTMLRLGATRDRLTVVCDQVGGPTPAADIAAACLAMARGLAARPDLSGTYHLSGGPDVSWADFAREIFRQAELDCLVADIASADYPQKAHRPANSRMDCSDLARFGLSRPDWRQGLARVLADLQEVSE
>NZ_CP051470.1|WP_002724812.1|26158_27049_+|glucose-1-phosphate-thymidylyltransferase-RfbA
MSVRKGIILAGGSGTRLYPLTIGVSKQLMPVYDKPMIYYPLSVLMLAGIREIAIITTPQDQEQFRRALGTGAQWGISLTYLVQPRPEGLAQAYTIAEEFLAGSPSCMVLGDNIFFGHGLPDLLALADAKTEGGTVFGYHVADPERYGVVAMDERGRVTQIVEKPKVAPSNYAVTGIYFLDARAPDLVHGIRPSERGELEIVSLLEIYLEEGLLDVQRMGRGFAWLDTGTHASLLDAGNFVRTLQLRQGMQTGCPEEIAFARGWVDAEALTGMAAQLSKNDYGRYLQGLLTDRMMEG
>NZ_CP051470.1|WP_011836183.1|27023_27806_-|deacetylase-sulfotransferase
MRAASPRVRFLVAGAQKCGTTALHRFLSAHPGLFLPAGKELHFFDRPLPDDWSGPEGPLYETAFAQARPDQLCGEATPVYLFHTPSLQRIRAYNPAMRLILLLRDPVLRAYSHWRMERTRGAETLPFPEAIRAGRARVAEDWRTFSYVERGFYGAQLTELERLFPREQRLVLWTDEMQRDHAGTLARIWRFLGCAAPPVPPPPAEIRPLDPAPGLAPLAEEDARYLRSLYAPDIALTEALTGRDLSLWREGALSPPSSGR
>NZ_CP051470.1|WP_011836184.1|28172_28898_-|sulfotransferase
MDRDLPETPALVLGASGGSGTRVAGQLLRAAGGYLGGARNEAGDSLALVAAIEALAARGARLLEGGRPEEADLALWRAALTEHLALHAGEPFWGWKNPRSMFLLPFSVALVPGLRFIHMVRDGRDMALSGNRRQYERHVPEGPGTPADRARFWAESNLRVKRHAEAVLGDRYAILRFEDLCRDPEGCMARLGRQFGLRLEPAGTGIEVRPPDGVGRHRALPAADRAAVEAAAAPAMEAFGY
>NZ_CP051470.1|WP_002724637.1|29099_29936_+|3-deoxy-8-phosphooctulonate-synthase
MTETPTIVTIGDIAIGGGHPIALITGPCQLESLDHARMMAERIAEACAPTGTKFIFKASYDKANRSSLSTARGLGMEKGLEILGRIREEFGVPVLTDVHEPGHCATAAEVCDVLQIPAFLCRQTDLLLAAGETGRAVNVKKGQFLAPWDMKNVADKVASTGNRRILLCERGTSFGYNTLVTDFRGLPTMAATGWPVVFDATHSVQQPGGLGGSSGGQREFAPVLARAACAVGVSALFIETHEDPDRAPSDGPNMIPVDRMGRLIADLCAFDALAKSLA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP030273	Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence	67220-67252	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	CP047033	Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence	60898-60930	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NC_009040	Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence	21550-21582	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP047039	Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence	60874-60906	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP015213	Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence	104690-104722	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP051470	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence	19476-19508	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP015290	Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence	3847-3879	0	1.0
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NC_011960	Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence	72598-72630	2	0.939
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	CP036421	Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence	28105-28137	2	0.939
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP033321	Azospirillum brasilense strain Cd plasmid p3, complete sequence	291403-291435	7	0.788
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1573927-1573959	7	0.788
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	558458-558490	7	0.788
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK864266	Gordonia phage Arri, complete genome	8692-8724	9	0.727
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MN284907	Gordonia phage Fireball, complete genome	8624-8656	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK864264	Gordonia phage VanDeWege, complete genome	8812-8844	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MH479910	Gordonia phage Danyall, complete genome	8520-8552	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MT639651	Gordonia phage Portcullis, complete genome	8580-8612	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MH479917	Gordonia phage KimmyK, complete genome	8648-8680	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MH669015	Gordonia phage TillyBobJoe, complete genome	8335-8367	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK814761	Gordonia phage SmokingBunny, complete genome	8499-8531	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	KX557286	Gordonia phage Twister6, complete genome	8431-8463	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK864267	Gordonia phage Valary, complete genome	8884-8916	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK967381	Gordonia phage RogerDodger, complete genome	8884-8916	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MT310872	Gordonia phage Evamon, complete genome	8501-8533	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MT521998	Gordonia phage Jambalaya, complete genome	8332-8364	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK864265	Gordonia phage Barb, complete genome	8648-8680	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	NC_030913	Gordonia phage Wizard, complete genome	8624-8656	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MK305889	Gordonia phage Mutzi, complete genome	8520-8552	10	0.697
NZ_CP051470_1	1.1\|19476\|33\|NZ_CP051470\|CRISPRCasFinder	19476-19508	33	MN010760	Gordonia phage Nubi, complete genome	8521-8553	10	0.697

1. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP030273 (Rhodobacter sphaeroides 2.4.1 plasmid pA, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

2. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to CP047033 (Rhodobacter sphaeroides strain DSM 158 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

3. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NC_009040 (Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

4. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP047039 (Rhodobacter sphaeroides strain 2.4.1 substr. H2 plasmid pEA, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

5. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP015213 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

6. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP051470 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10A, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

7. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP015290 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid b, complete sequence) position: , mismatch: 0, identity: 1.0

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccgacccccc	Protospacer
*********************************

8. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NC_011960 (Rhodobacter sphaeroides KD131 plasmid pRSKD131B, complete sequence) position: , mismatch: 2, identity: 0.939

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccggcccccg	Protospacer
**************************.*****

9. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.939

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tttgcccccgccgtgccgccctgccggcccccg	Protospacer
**************************.*****

10. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP033321 (Azospirillum brasilense strain Cd plasmid p3, complete sequence) position: , mismatch: 7, identity: 0.788

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tgttcgcccgccttgccgccctggcgacccggc	Protospacer
* * * ****** ********** ******  *

11. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 7, identity: 0.788

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tgttcgcccgccttgccgccctggcgacccggc	Protospacer
* * * ****** ********** ******  *

12. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.788

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
tgttcgcccgccttgccgccctggcgacccggc	Protospacer
* * * ****** ********** ******  *

13. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK864266 (Gordonia phage Arri, complete genome) position: , mismatch: 9, identity: 0.727

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaaggatct	Protospacer
 ************ .**********.*   .*.

14. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MN284907 (Gordonia phage Fireball, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

15. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK864264 (Gordonia phage VanDeWege, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

16. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MH479910 (Gordonia phage Danyall, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

17. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MT639651 (Gordonia phage Portcullis, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

18. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MH479917 (Gordonia phage KimmyK, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

19. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MH669015 (Gordonia phage TillyBobJoe, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

20. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK814761 (Gordonia phage SmokingBunny, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

21. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to KX557286 (Gordonia phage Twister6, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

22. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK864267 (Gordonia phage Valary, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

23. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK967381 (Gordonia phage RogerDodger, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

24. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MT310872 (Gordonia phage Evamon, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

25. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MT521998 (Gordonia phage Jambalaya, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

26. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK864265 (Gordonia phage Barb, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

27. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to NC_030913 (Gordonia phage Wizard, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

28. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MK305889 (Gordonia phage Mutzi, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

29. spacer 1.1|19476|33|NZ_CP051470|CRISPRCasFinder matches to MN010760 (Gordonia phage Nubi, complete genome) position: , mismatch: 10, identity: 0.697

tttgcccccgccgtgccgccctgccgacccccc	CRISPR spacer
gttgcccccgccggaccgccctgccaggagtct	Protospacer
 ************ .**********..   .*.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

19546 : 29936

Enterobacteria_phage(42.86%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_050988687.1\|19546_20953_-	AAA family ATPase	A0A0K2FLP4	Brevibacillus_phage	2.1e-06	26.6
WP_002724803.1\|21691_22654_+	replication initiator protein A	A0A0K1Y6J9	Rhodobacter_phage	1.3e-58	39.1
WP_002724804.1\|22704_23643_+	glycosyltransferase	NA	NA	NA	NA
WP_009565041.1\|23706_24270_+	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	7.7e-32	43.5
WP_011836181.1\|24273_25314_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.2e-91	52.1
WP_011836182.1\|25310_26162_+	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	3.1e-32	38.5
WP_002724812.1\|26158_27049_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.7e-87	54.9
WP_011836183.1\|27023_27806_-	deacetylase sulfotransferase	NA	NA	NA	NA
WP_011836184.1\|28172_28898_-	sulfotransferase	NA	NA	NA	NA
WP_002724637.1\|29099_29936_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	6.0e-49	41.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP051469

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

52605 : 62291

Rhodobacter_phage(44.44%)

integrase

attL 51504:51519|attR 67354:67369

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
51504:51519	attL	NA	NA	NA	NA
WP_114071702.1\|52605_53604_-\|integrase	site-specific integrase	A0A068CCA6	Rhizobium_phage	2.5e-09	24.4
WP_011339632.1\|53847_54564_-	hypothetical protein	A0A0U2BXK1	Paracoccus_phage	3.5e-82	64.3
WP_030002922.1\|54869_55208_-	DUF4326 domain-containing protein	A0A142K9N0	Gordonia_phage	4.9e-18	35.9
WP_011339630.1\|55326_55581_-	hypothetical protein	NA	NA	NA	NA
WP_011339629.1\|55811_56921_-	phage Gp37/Gp68 family protein	A0A0A8ILD3	Aurantimonas_phage	1.4e-85	50.1
WP_023004254.1\|56913_57117_-	hypothetical protein	NA	NA	NA	NA
WP_017140297.1\|57119_57329_-	hypothetical protein	NA	NA	NA	NA
WP_017140296.1\|57315_57468_-	hypothetical protein	NA	NA	NA	NA
WP_011339628.1\|57564_58551_-	YfdQ family protein	H6WBP5	Rhodobacter_phage	7.5e-75	46.9
WP_017140295.1\|58569_58929_-	hypothetical protein	I3UM32	Rhodobacter_phage	4.0e-18	44.0
WP_011339625.1\|59161_59494_-	hypothetical protein	NA	NA	NA	NA
WP_011339624.1\|59490_59688_-	hypothetical protein	NA	NA	NA	NA
WP_017140294.1\|60044_60800_-	helix-turn-helix domain-containing protein	H6WBQ3	Rhodobacter_phage	1.7e-13	40.0
WP_017140293.1\|60798_61035_+	hypothetical protein	NA	NA	NA	NA
WP_002723285.1\|61115_61376_+	hypothetical protein	A0A1X9HW32	Ruegeria_phage	1.8e-07	50.7
WP_011339621.1\|61372_61633_+	hypothetical protein	NA	NA	NA	NA
WP_011339620.1\|61769_62291_+	DUF1937 family protein	I3UM60	Rhodobacter_phage	2.7e-23	42.3
67354:67369	attR	NA	NA	NA	NA

DBSCAN-SWA_2

66939 : 76537

Acidithiobacillus_phage(42.86%)

capsid,terminase,portal,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011339613.1\|66939_69102_+\|terminase	phage terminase large subunit family protein	A0A291AUS9	Sinorhizobium_phage	1.9e-102	35.4
WP_002723266.1\|69098_69308_+	hypothetical protein	NA	NA	NA	NA
WP_011339612.1\|69307_70798_+\|portal	phage portal protein	K4I1F2	Acidithiobacillus_phage	1.9e-178	67.4
WP_011339611.1\|70794_72141_+	S49 family peptidase	A0A068CE01	Rhizobium_phage	8.7e-58	48.2
WP_011339610.1\|72276_72666_+\|head	head decoration protein	K4ICP8	Acidithiobacillus_phage	3.6e-20	45.7
WP_011339609.1\|72747_73770_+\|capsid	major capsid protein	K4I3Z3	Acidithiobacillus_phage	1.1e-105	56.3
WP_011339608.1\|73780_74107_+	hypothetical protein	NA	NA	NA	NA
WP_011339607.1\|74103_74526_+	hypothetical protein	NA	NA	NA	NA
WP_011339606.1\|74637_75108_+	hypothetical protein	M4QQ74	Salicola_phage	1.2e-17	38.9
WP_017140289.1\|75211_75652_+	hypothetical protein	NA	NA	NA	NA
WP_017140288.1\|75714_76077_+	hypothetical protein	NA	NA	NA	NA
WP_017140287.1\|76039_76537_-	YbjQ family protein	M4STD1	Rhodobacter_phage	4.2e-26	42.6

DBSCAN-SWA_3

85051 : 90581

Rhodobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011339597.1\|85051_85369_+	hypothetical protein	I3UM16	Rhodobacter_phage	3.7e-23	57.9
WP_011339596.1\|85620_85983_+	hypothetical protein	NA	NA	NA	NA
WP_011339595.1\|86351_87158_+	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	3.4e-81	57.0
WP_011339594.1\|87212_88022_+	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	9.2e-63	49.4
WP_011339593.1\|88034_88517_+	hypothetical protein	F8TVB7	EBPR_siphovirus	1.2e-12	51.8
WP_011339592.1\|88769_89198_+	DNA mismatch endonuclease Vsr	I6NSG0	Burkholderia_phage	8.7e-36	50.4
WP_011339591.1\|89249_90581_+	DNA cytosine methyltransferase	A0A191SB20	Nostoc_phage	6.4e-53	36.2

DBSCAN-SWA_4

229781 : 236952

EBPR_siphovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011339490.1\|229781_230288_-	hypothetical protein	F8TVB7	EBPR_siphovirus	3.9e-11	48.2
WP_011339489.1\|230300_231110_-	M15 family metallopeptidase	A0A0B5A5A2	Paracoccus_phage	7.1e-63	49.1
WP_114071701.1\|231164_231971_-	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	5.6e-84	58.6
WP_017140411.1\|232198_232471_+	BrnT family toxin	K4NX81	Burkholderia_phage	2.4e-15	48.2
WP_011339486.1\|232463_232685_+	hypothetical protein	NA	NA	NA	NA
WP_011339485.1\|232737_233055_-	hypothetical protein	I3UM16	Rhodobacter_phage	2.8e-23	57.9
WP_011339484.1\|233188_233515_-	hypothetical protein	NA	NA	NA	NA
WP_017140410.1\|233518_233836_-	hypothetical protein	NA	NA	NA	NA
WP_011339481.1\|234869_235289_-	hypothetical protein	NA	NA	NA	NA
WP_011339480.1\|235285_235597_-	hypothetical protein	NA	NA	NA	NA
WP_011339479.1\|235605_236952_-	S49 family peptidase	A0A068CE01	Rhizobium_phage	6.7e-58	47.0

DBSCAN-SWA_5

547158 : 558161

Vibrio_phage(30.0%)

tRNA,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002724123.1\|547158_547491_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_114071698.1\|547487_548309_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	8.9e-21	32.2
WP_017140369.1\|548336_548840_-	YbjN domain-containing protein	NA	NA	NA	NA
WP_160384142.1\|549272_550268_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_017140367.1\|550435_551494_-	restriction endonuclease or methylase	A0A1S5SAB0	Streptococcus_phage	3.3e-60	38.8
WP_017140366.1\|551831_552659_-	DNA adenine methylase	A0A219VHB5	Ochrobactrum_phage	3.9e-93	62.3
WP_011339240.1\|552802_553777_-\|tail	phage tail protein	D4HTW7	Vibrio_phage	1.0e-44	38.6
WP_011339239.1\|553773_553986_-\|tail	phage tail protein	R9TR63	Vibrio_phage	9.9e-09	47.8
WP_017140365.1\|553982_554393_-\|tail	phage tail protein	A0A193GYE0	Enterobacter_phage	8.6e-33	50.4
WP_011339237.1\|554385_556713_-	tape measure protein	A0A2I7S9D9	Vibrio_phage	7.0e-55	37.9
WP_017140364.1\|556722_556851_-\|tail	GpE family phage tail protein	NA	NA	NA	NA
WP_011339236.1\|556877_557174_-\|tail	phage tail assembly protein	E5E3Q0	Burkholderia_phage	8.4e-14	51.2
WP_011339235.1\|557188_557686_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	6.8e-24	37.7
WP_011339233.1\|557966_558161_-	hypothetical protein	A0A0U4JEJ6	Pseudomonas_phage	8.8e-12	58.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP051468

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051468_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051468_1

216860-216962

Orphan

Consensus_repeat	Method
AAAGCTCCGCGCTCCGATCAGCGCGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051468_1

>merge|NZ_CP051468|1|216860-216962|CRISPRCasFinder
AAAGCTCCGCGCTCCGATCAGCGCGCGGGTGGCCGCCGTGTCCCCGGGCTGCCCCGTCCGACTGTGCGGCGTGGTGAAAGCTCCGCGCTCCGATCGGCGCGCG

>NZ_CP051468|1|1|216860-216962|CRISPRCasFinder
AAAGCTCCGCGCTCCGATCAGCGCGCG	GGTGGCCGCCGTGTCCCCGGGCTGCCCCGTCCGACTGTGCGGCGTGGTG
AAAGCTCCGCGCTCCGATCGGCGCGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051468.1\|WP_017139961.1\|206433_206973_-\|heme-binding-protein	unknown	unknown	gnl\|CDD\|377411
NZ_CP051468.1\|WP_011338542.1\|218669_219158_-\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|367134
NZ_CP051468.1\|WP_011338539.1\|225237_226326_+\|GTP-cyclohydrolase-II	unknown	unknown	gnl\|CDD\|234745
NZ_CP051468.1\|WP_011338546.1\|214858_215491_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|225136
NZ_CP051468.1\|WP_002721045.1\|219150_219981_-\|S-formylglutathione-hydrolase	unknown	unknown	gnl\|CDD\|131868
NZ_CP051468.1\|WP_011338541.1\|221284_222262_-\|membrane-protein	unknown	unknown	gnl\|CDD\|224548
NZ_CP051468.1\|WP_011338540.1\|222607_223231_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379522
NZ_CP051468.1\|WP_002721035.1\|224398_225085_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP051468.1\|WP_011338545.1\|215487_216738_-\|BtaA-family-protein	unknown	unknown	gnl\|CDD\|378757
NZ_CP051468.1\|WP_011338543.1\|217761_218673_-\|ornithine-cyclodeaminase	unknown	unknown	gnl\|CDD\|180421
NZ_CP051468.1\|WP_011338548.1\|210999_211929_+\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|377028
NZ_CP051468.1\|WP_002721055.1\|209238_209844_+\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP051468.1\|WP_002721054.1\|210076_210919_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051468.1\|WP_011338550.1\|207219_208647_+\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP051468.1\|WP_002721056.1\|208710_209235_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225786
NZ_CP051468.1\|WP_002721037.1\|223261_224050_-\|exodeoxyribonuclease-III	unknown	unknown	gnl\|CDD\|197320
NZ_CP051468.1\|WP_011338544.1\|217112_217757_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378238
NZ_CP051468.1\|WP_017139959.1\|212025_213135_+\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_CP051468.1\|WP_002721044.1\|219996_220926_-\|AEC-family-transporter	unknown	unknown	gnl\|CDD\|223751
NZ_CP051468.1\|WP_002721051.1\|213499_214453_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769

Protein	Function_ID	Function_description	E-value
NZ_CP051468.1\|WP_017139961.1\|206433_206973_-\|heme-binding-protein	gnl\|CDD\|377411	pfam04832, SOUL, SOUL heme-binding protein. This family represents a group of putative heme-binding proteins. Our family includes archaeal and bacterial homologs.	1.92741e-52
NZ_CP051468.1\|WP_011338542.1\|218669_219158_-\|YaiI/YqxD-family-protein	gnl\|CDD\|367134	pfam02639, DUF188, Uncharacterized BCR, YaiI/YqxD family COG1671.	1.39912e-56
NZ_CP051468.1\|WP_011338539.1\|225237_226326_+\|GTP-cyclohydrolase-II	gnl\|CDD\|234745	PRK00393, ribA, GTP cyclohydrolase II RibA.	3.84811e-98
NZ_CP051468.1\|WP_011338546.1\|214858_215491_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|225136	COG2226, UbiE, Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].	3.4864e-21
NZ_CP051468.1\|WP_002721045.1\|219150_219981_-\|S-formylglutathione-hydrolase	gnl\|CDD\|131868	TIGR02821, S-formylglutathione_hydrolase, S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well. [Cellular processes, Detoxification].	7.60765e-144
NZ_CP051468.1\|WP_011338541.1\|221284_222262_-\|membrane-protein	gnl\|CDD\|224548	COG1633, COG1633, Uncharacterized conserved protein [Function unknown].	1.81823e-36
NZ_CP051468.1\|WP_011338540.1\|222607_223231_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379522	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region. This family comprises the C-terminal domain of transcriptional regulators of the TetR family. It includes the AefR transcriptional regulator from P. syringae. It is found in association with pfam00440.	3.06401e-40
NZ_CP051468.1\|WP_002721035.1\|224398_225085_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	7.26658e-70
NZ_CP051468.1\|WP_011338545.1\|215487_216738_-\|BtaA-family-protein	gnl\|CDD\|378757	pfam11899, DUF3419, Protein of unknown function (DUF3419). This family of proteins are functionally uncharacterized. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 398 to 802 amino acids in length.	8.65185e-145
NZ_CP051468.1\|WP_011338543.1\|217761_218673_-\|ornithine-cyclodeaminase	gnl\|CDD\|180421	PRK06141, PRK06141, ornithine cyclodeaminase family protein.	1.79506e-84
NZ_CP051468.1\|WP_011338548.1\|210999_211929_+\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|377028	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family. This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling. This family includes: AP endonuclease proteins EC:4.2.99.18, DNase I proteins EC:3.1.21.1, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56, Sphingomyelinase EC:3.1.4.12, and Nocturnin.	8.44086e-09
NZ_CP051468.1\|WP_002721055.1\|209238_209844_+\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	6.37864e-137
NZ_CP051468.1\|WP_011338550.1\|207219_208647_+\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP051468.1\|WP_002721056.1\|208710_209235_+\|hypothetical-protein	gnl\|CDD\|225786	COG3247, HdeD, Uncharacterized conserved protein [Function unknown].	1.12913e-12
NZ_CP051468.1\|WP_002721037.1\|223261_224050_-\|exodeoxyribonuclease-III	gnl\|CDD\|197320	cd09086, ExoIII-like_AP-endo, Escherichia coli exonuclease III (ExoIII) and Neisseria meningitides NExo-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases. This subfamily includes Escherichia coli ExoIII, Neisseria meningitides NExo,and related proteins. These are ExoIII family AP endonucleases and they belong to the large EEP (exonuclease/endonuclease/phosphatase) superfamily that contains functionally diverse enzymes that share a common catalytic mechanism of cleaving phosphodiester bonds. AP endonucleases participate in the DNA base excision repair (BER) pathway. AP sites are one of the most common lesions in cellular DNA. During BER, the damaged DNA is first recognized by DNA glycosylase. AP endonucleases then catalyze the hydrolytic cleavage of the phosphodiester bond 5' to the AP site, and this is followed by the coordinated actions of DNA polymerase, deoxyribose phosphatase, and DNA ligase. If left unrepaired, AP sites block DNA replication, and have both mutagenic and cytotoxic effects. AP endonucleases can carry out a variety of excision and incision reactions on DNA, including 3'-5' exonuclease, 3'-deoxyribose phosphodiesterase, 3'-phosphatase, and occasionally, nonspecific DNase activities. Different AP endonuclease enzymes catalyze the different reactions with different efficiencies. Many organisms have two AP endonucleases, usually one is the dominant AP endonuclease, the other has weak AP endonuclease activity. For example, Neisseria meningitides Nape and NExo, and exonuclease III (ExoIII) and endonuclease IV (EndoIV) in Escherichia coli. NExo and ExoIII are found in this subfamily. NExo is the non-dominant AP endonuclease. It exhibits strong 3'-5' exonuclease and 3'-deoxyribose phosphodiesterase activities. Escherichia coli ExoIII is an active AP endonuclease, and in addition, it exhibits double strand (ds)-specific 3'-5' exonuclease, exonucleolytic RNase H, 3'-phosphomonoesterase and 3'-phosphodiesterase activities, all catalyzed by a single active site. Class II AP endonucleases have been classified into two families, designated ExoIII and EndoIV, based on their homology to the Escherichia coli enzymes ExoIII and endonuclease IV (EndoIV). This subfamily belongs to the ExoIII family; the EndoIV family belongs to a different superfamily.	7.73964e-104
NZ_CP051468.1\|WP_011338544.1\|217112_217757_+\|hypothetical-protein	gnl\|CDD\|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	1.62038e-18
NZ_CP051468.1\|WP_017139959.1\|212025_213135_+\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_CP051468.1\|WP_002721044.1\|219996_220926_-\|AEC-family-transporter	gnl\|CDD\|223751	COG0679, COG0679, Predicted permeases [General function prediction only].	1.74447e-36
NZ_CP051468.1\|WP_002721051.1\|213499_214453_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	7.08622e-18

>NZ_CP051468.1|WP_011338545.1|215487_216738_-|BtaA-family-protein
MTQFALTHLPAPPVARQIGAAVHRTSLLSAEGLMERMFSRLFHGLVYPQIWEDPAVDMAALAIRPGDRLVAIASGGCNVLSYLTQGPGSILAVDLSPAHVALGRLKLAAARTLPDHAAFFDLFGRADLPGNAALYDRHIAPALDGRSRRYWEARSPFGRRIQLFERGFYRHGALGRFIGAAHTLARAAGTDLRGFLDCPDIEAQRSFFYAHIGPLFEAPVVQALARRPAALFGLGIPPAQYALLAGDGDGDVLPVLRQRLHRLLCDFPLRENYFAFQAIARRYPRPGEGALPPYLEPTAFETLRENAGRVQIENRSLTEALAAEPEESIHGFTLLDAQDWMTDAQLTALWRQVTRTAAPGARVIFRTGGAADLLPGRVPEEILGHWRADRAAGQAGHAADRSAIYGGFHLYRRRDA
>NZ_CP051468.1|WP_011338546.1|214858_215491_-|methyltransferase-domain-containing-protein
MTDATHAALMDATYRHQRRIYDVTRRHFLLGRDRLIAELDPPPGARVLEIACGTGRNLDLIGRRWPGCRLSGLDISQEMLASARARLGRRATLALGDATRFEALPLFGTDRFERIVLSYALSMIPDWREALREAALHLVPGGRLHVVDFGDQAGLPGWARAGLRGWIGRFHVTPRDDLGTALGETALGIGGYAEYRSLGGGYAILGTLTR
>NZ_CP051468.1|WP_002721051.1|213499_214453_+|DMT-family-transporter
MAKSNTRGALLALLAFAIYATHDVVVKVLGRDYTAVQILFFATLLGFPLASMMLMRDRADGNLRPRHPWWVLLRTCCIVTTGLCAFYAFSVLPLAQTYAILFTMPLLVTLLAIPLLGETIGLHRGAAIATGLLGVLIVLRPGAEPLSLGHAAALLAAVTSSLGSVIVRKIGQDERSVVLLLYPMVANFFVLGAALPFVYRPMPVEHLGMMGIIAAFSFVAMLLTITAYRMAEAVIVAPMQYSQMVWAAIFGWLIFGERSDVWTWVGAGVIIASGLYIVGRESRRNVSENRPASQTRLRPEVGLMPRLLRRRETRDTP
>NZ_CP051468.1|WP_017139959.1|212025_213135_+|3-isopropylmalate-dehydrogenase
MANPSLLILAGDGIGPEVMAEVKRIIGWFGEKRGVSFDVSEDLVGGAAYDAHGTPLADETMARAQEVDAVLLGAVGGPKYDVLDFSVKPERGLLRLRKEMDLYANLRPAQCFDALADFSSLKRDIVAGLDIMIVRELTSGVYFGEPRGIFPDNEGGRFGVNTQRYTTEEIRRVARSAFELARRRNNRVCSMEKANVMESGILWREEVQWVHDNEYPDVELSHMYADNGAMQLVRWPRQFDVIVTDNLFGDILSDCAAMLTGSLGMLPSASLGAPMANGRPKALYEPVHGSAPDIAGQGKANPIACILSFAMALRYSFDMGEEATRLEKAVETVLADGVRTADLMGPEGGTPVSTSGMGDAVLAALDASL
>NZ_CP051468.1|WP_011338548.1|210999_211929_+|endonuclease/exonuclease/phosphatase-family-protein
MDLERAGPGLLLRDIRAGKDPQILAVRRMIEALRADVLFLTGVDYDADLLAARALAGDLYPHLLALRPNVGRPTGIDLDGDGRLGGPGDAQGWGRFGGQGGMVLLSRLPLGLPRDFSDLLWADLPEANLPPMPPEARAVQRLASVGAWEVPLPRTGGPALKLLLWSATPPVFDGPEDRNGRRAGDEALFWARLLDGRLPFPAPEGPVLLMGKANIDPLAGDGPRAAIAALLAHPALQDPAPRGPDGSRATADFRADDGPGLLRTDYILPARGLPVTASGVLWPPPGDPLAAVAAQASRHRPVWVELDLP
>NZ_CP051468.1|WP_002721054.1|210076_210919_+|hypothetical-protein
MNVFSRLSGALLRASLVVLLLALPSVLLPGVGADGQQMVALAALFGGVLTLVEYNATYPGLVEFRDAPPFNRLRFALLLVMVLTLTLMQREASDPSALTALSARAAGAVGTAMDFAYSPVRLATLMLSDRATPEQTAVLRNAAGISYLIATAAVAMFVAVIRLNRWPSRNLAFNVWVNLPTFEATAGGDVVQRLLRDARFNLALGFLLPFLIPIAVKIGTSGLDPLTLASPQALVWITVAWAFLPASLLMRGVGMARIAEMIREKRRTGEVFGTRGLAPV
>NZ_CP051468.1|WP_002721055.1|209238_209844_+|3-isopropylmalate-dehydratase-small-subunit
MQEFTKVTGVAAPMPLVNIDTDMIIPKQFLKTIQRSGLGKNLFDEMRYNPDGSEIPEFVLNQPAYRDAQIIVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIVMPPEVVEVLMEDARRGANARMTVDLEAQTVTTSDGQSFPFQVDSFRRHCLMNGLDDIGLTLEKAASIDGFERDLATLRPWV
>NZ_CP051468.1|WP_002721056.1|208710_209235_+|hypothetical-protein
MKGTSSLIVSGILALLGGIAALAFPLPVSLAVTVLAGCVFVASGAFGLWAAFSDRGMPSRGAAAFFSLVSLVAGVWMLANPLAGMVSLTLMLGALFLVSGVVRLGLSLATWRGTVMFWLMALSGLISAGLGLFILLRLPEASLVLLGTLVAVELIVMGATLVAMGFALRKSGNP
>NZ_CP051468.1|WP_011338550.1|207219_208647_+|3-isopropylmalate-dehydratase-large-subunit
MTAPRTLYDKIWDDHVVHQSEDGTCLLYIDRHLVHEVTSPQAFEGLRMTGRKVRAPEKTIAVPDHNVPTTEGRDTKIDNEESRIQVEALDKNARDFGINYYPVSDIRQGIVHIVGPEQGWTLPGMTVVCGDSHTATHGAFGALAHGIGTSEVEHVLATQTLIQKKSKNMKVEITGSLRPGVTAKDITLSVIGLTGTAGGTGYVIEYCGQAIRELSMEGRMTVCNMAIEGGARAGLIAPDEKTFAYVMGRPHAPKGAAWEAALAYWKTLFTDEGAQFDKVVTIRGEDIAPVVTWGTSPEDVLPITATVPAPEDFTGGKVEAARRSLEYMGLTPGQKLTDIKIDTVFIGSCTNGRIEDLRAAAEILKGKKVAPGMRAMVVPGSGLVRAQAEEEGLAQIFIDAGFEWRLAGCSMCLAMNPDQLSPGERCASTSNRNFEGRQGRNGRTHLVSPGMAAAAAITGHLTDVRDLMMAPAEPA
>NZ_CP051468.1|WP_017139961.1|206433_206973_-|heme-binding-protein
MNGAVDHKGYEQPTYDLEFAETATEIRRYGPYLVAEVTMAGDRSTAITRGFRVLARYIFGGNAESRRIEMTVPVSQLPAGEDLWTVRFTMPAVRSASLLPAPKDSRIRFVTVPPSRQAVRRFSGWPTDHALRRQAEGLAHWIAERGLPKREGPYFYFYDSPMTLPWQRRNEVAFGLGEG
>NZ_CP051468.1|WP_011338544.1|217112_217757_+|hypothetical-protein
MSGTQSETGRQLAPGLLSLGVGLAALAGLWGGPLPDLARVSFVWHMMLHLGVILGAAPLIALGLARLAPLRTAWPVLFAGAASLLELAVVWGWHAPRLHEAAALDPTLFRIQQATFLGAGVLVWLPGLAPGRAAAGAGLLAMLFSLMHMTMLGVLLTLSPRLLYAPEICGTAFGLAPLDTQRLGGAMMAVAGLGPYLVGAAVFTMRLTREGPED
>NZ_CP051468.1|WP_011338543.1|217761_218673_-|ornithine-cyclodeaminase
MSIEIIGPEAEAHLSWDGLTTALTQGHKLPRAEVADIFLYRGKDTVLSRAAWIDGLGQLVKTATIFPGNGAAGKPTVNGAVTLYSDRDGTLEALVDFHLVTKWKTAGDSLLAAKRLARRDSREILLVGAGNVARSMIEAYGSHFPDARFTVWNRSADKARAMEGPQVRATEDLEAAVRAADIICTATMSQEPVVKGEWLKPGTHLDLIGAYRPDMREVDDEALRRATVFVDSRKTTIGHIGEIQDPLDRGILTEADIRADYYDLASGLYARRSDEEITLAKNGGGAHLDLMTASYIAAMWRQR
>NZ_CP051468.1|WP_011338542.1|218669_219158_-|YaiI/YqxD-family-protein
MTDLYIDADACPVKAEAERVAVRHGVRMFLVSNGGIRPPAHPLVESIFVPEGPDVADMWIADRARTGDVVVTSDIPLAAKVVAAGALVVKPNGETLTQANIGNALATRDLMADLRSADPFRQGGGRPFSKADRSRFLDALERAMRKAQEAGRSASGGNEAGS
>NZ_CP051468.1|WP_002721045.1|219150_219981_-|S-formylglutathione-hydrolase
MKTLSESRCFGGTQGVYSHTSQVTGCDMTFGLFLPPEAENEAVPLVWYLSGLTCTHENAMVKAGAQKWAAQEGLALVFPDTSPRGEGVPDDENYALGQGAGFYVNATEAPWSTNFRMWDYITEDLPRVLFSAFPLDESRQSIMGHSMGGHGALTIAMSFPGRFRSVSAFAPITHPTASDWGRKQLTAYLGTDESKWAPHDSVLLMRKRGFDGPILIDQGASDQFLDALKPEALAEAMMARRQQGIIRMQPGYDHSYFFVSTFMEDHIQFHAEALYD
>NZ_CP051468.1|WP_002721044.1|219996_220926_-|AEC-family-transporter
MLPVLLETLPFFALIGTGYMAGRMGMFTPEATAWLTKFVFYFALSAMLFRFAANLSLAEIWSLPFVAAYLAGSGAVYLLATLVARMRGVGTEVAAMEAQCAVIGNTGFLGVPMLVLLLGAGAAGPVLMMLSIDLIFFSSLITLIITGKREGHMSLRVVKVLALGLLRNPMIVSMVAGLGWSATGAAVPEPVNEFLALLGGAATPGALFAIGASLAGKSAERLEIAAWLSFCKLVLHPLSVAVAALAIFPVERQAAGVMIAAAALPVAGNVYILAQHYGVAPQRVSASILISTAVSILTITGVIAWVTTF
>NZ_CP051468.1|WP_011338541.1|221284_222262_-|membrane-protein
MFSSFSSRRRFRDLSDAEILALAISSEEDDARIYRSYADRLRAPYPGTAALFEAMAEEEDSHRRRLIGTFRDRFGETIPLIRREHVEGYPSRKPVWLLETLPLERVRREAWEMENAARSFYETAARHVTDASTRKLLGDLAAAEAAHEHRAERLAEEHLTDEATAAEDETARRQFILTWVQPGLAGLMDGSVSTLAPIFATAFATQDPATTFQVALAASVGAGISMGFTEAAHDDGVLSGRGAPWKRGLASGVMTTAGGLGHALPYLIPDFAWATGIAIAVVFFELWAIAWIQNRYMETPFLRAALQVVLGGGLVLAAGILIGFG
>NZ_CP051468.1|WP_011338540.1|222607_223231_+|TetR/AcrR-family-transcriptional-regulator
MPAETPPARKGRKMPQVLEGARTIFLRDGFEGASVDDIARAAGVSKATLYSYFPDKRLLFLEVAKAECLRQSEEAVALITADLAPRAVLTLAATRIVAFVLSDFGIRTYRICVAEADRFPELGHEFYESGPALVRQRIVDYLAQAVGRGELAIDDLELAADQFAELCKADLFNRIVFGVGNSVSEAERQKVAQGAVEMFLARYAPRP
>NZ_CP051468.1|WP_002721037.1|223261_224050_-|exodeoxyribonuclease-III
MTFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVARGQKSYNGVAILSKLPLVDAGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDREQNVKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEVDHLNALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHGSRILKAARGWLQPSDHAPVFATFDL
>NZ_CP051468.1|WP_002721035.1|224398_225085_-|response-regulator-transcription-factor
MASLKKILLVDDDDDLREALSEQLVMTEDFDVFEAASGAEGMEKAKAGLYDLVILDVGLPDTDGRELCRRMRKAGVKCPVLMLTGHDSDSDTILGLDAGANDYVTKPFKFPVLLARIRAQLRAHEQSEDAVFQLGPYSFRPAQKMLVDEKERKIRLTEKETNILKFLYRASQGVVAREVLLHEVWGYNAGVTTHTLETHIYRLRQKIEPDPSNARLLVTESGGYRLVA
>NZ_CP051468.1|WP_011338539.1|225237_226326_+|GTP-cyclohydrolase-II
MSLSLGIVERLNRARGDLRMGVPVVLTEEGAGAVAVAVEALEPGRLADLRLLGEPVLAITARRAETLKARVYDDDLARIELPDAAGIEWLRAVADPADDLRLPMKGPLRALRGGGAGLARAALALAKSAHLLPAAVLVPVADPLRLAAQHALTVLPLEEARAELSRGSPLHPVVSARVPMVASQAGRVHVFRPEDGGEEHYAIEIGRPDRGLPVLARLHSACFTGDVLGSLKCDCGPQLRSALARMGEEGAGVLLYLNQEGRGIGLANKMRAYSLQDQGFDTVEANHRLGFEDDERDFRIGAGILRQMGFAAVRLLTNNPAKIRMMEANGIRVTERVPLHVGRNEFNAAYLATKAAKSGHLA

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Crispr_ID: NZ_CP051468_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051468_2

3139425-3139621

Orphan

Consensus_repeat	Method
AGATCGTCGCCCGCGCCGCCCGAGAGCGTGTCGTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP051468_2

>merge|NZ_CP051468|2|3139425-3139621|PILER-CR
AGATCGTCGCCCGCGTCGCCCGAGAGCGTGTCGTCTCCCTCGCCACCGTCCAGCGCGTCGTTGCCGGCCCCGCCCAGAAGGGCATCGTTCCCGCTGCCCCCCTCCATCGTGTCGTCGCCCGCGCCGCCTGCAAGAAGGTCGTCTCCGGCGCCGCCGAACAGAAGATCCTGCCCCGCCCCGCCCGAGAGCGTGTCGTT

>NZ_CP051468|2|1|3139425-3139621|PILER-CR
AGATCGTCGCCCGCGTCGCCCGAGAGCGTGTCGTCTCCCT	CGCCACCGTCCAGCGCGTCGTTGCCGGCCCCGCCCAGAAGGGCATCGTTCCCGCTGCCCCCCTCCATC
GTGTCGTCGCCCGCGCCGCCTGCAAGAAGGTCGTCTCCGG	CGCCGCCGAACAGAAGATCCTGCCCCGCCCCGC
CCGAGAGCGTGTCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051468.1\|WP_011338731.1\|3130509_3132231_-\|type-I-secretion-system-permease/ATPase	unknown	unknown	gnl\|CDD\|226969
NZ_CP051468.1\|WP_011338720.1\|3149128_3149938_+\|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl\|CDD\|234595
NZ_CP051468.1\|WP_011338733.1\|3127744_3128332_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051468.1\|WP_023003735.1\|3124946_3127733_+\|error-prone-DNA-polymerase	unknown	unknown	gnl\|CDD\|235553
NZ_CP051468.1\|WP_002721510.1\|3144050_3144320_-\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP051468.1\|WP_043764254.1\|3150150_3150330_-\|DUF1674-domain-containing-protein	unknown	unknown	gnl\|CDD\|227795
NZ_CP051468.1\|WP_002721512.1\|3141719_3143870_-\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP051468.1\|WP_002721508.1\|3144560_3145073_-\|DUF1643-domain-containing-protein	unknown	unknown	gnl\|CDD\|377919
NZ_CP051468.1\|WP_011338721.1\|3148468_3148891_-\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|234787
NZ_CP051468.1\|WP_011338730.1\|3132223_3133501_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340850
NZ_CP051468.1\|WP_011338725.1\|3140083_3141397_+\|calcium-binding-protein	unknown	unknown	gnl\|CDD\|380205
NZ_CP051468.1\|WP_011338722.1\|3147741_3148479_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226222
NZ_CP051468.1\|WP_011338724.1\|3145471_3146548_-\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|223110
NZ_CP051468.1\|WP_011338723.1\|3146768_3147674_-\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|235442
NZ_CP051468.1\|WP_017139984.1\|3136915_3138961_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051468.1\|WP_011338729.1\|3133497_3135678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051468.1\|WP_011338735.1\|3123612_3124866_+\|lytic-murein-transglycosylase	unknown	unknown	gnl\|CDD\|372592
NZ_CP051468.1\|WP_011338732.1\|3129211_3130513_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|130902
NZ_CP051468.1\|WP_011338728.1\|3135674_3136916_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340850
NZ_CP051468.1\|WP_002721525.1\|3128335_3129142_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040

Protein	Function_ID	Function_description	E-value
NZ_CP051468.1\|WP_011338731.1\|3130509_3132231_-\|type-I-secretion-system-permease/ATPase	gnl\|CDD\|226969	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only].	0
NZ_CP051468.1\|WP_043764254.1\|3150150_3150330_-\|DUF1674-domain-containing-protein	gnl\|CDD\|227795	COG5508, COG5508, Uncharacterized conserved small protein [Function unknown].	2.08648e-16
NZ_CP051468.1\|WP_011338720.1\|3149128_3149938_+\|4-hydroxy-tetrahydrodipicolinate-reductase	gnl\|CDD\|234595	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional.	3.96259e-122
NZ_CP051468.1\|WP_023003735.1\|3124946_3127733_+\|error-prone-DNA-polymerase	gnl\|CDD\|235553	PRK05672, dnaE2, error-prone DNA polymerase; Validated.	0
NZ_CP051468.1\|WP_002721510.1\|3144050_3144320_-\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	1.62449e-54
NZ_CP051468.1\|WP_011338723.1\|3146768_3147674_-\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|235442	PRK05389, truB, tRNA pseudouridine synthase B; Provisional.	0
NZ_CP051468.1\|WP_011338721.1\|3148468_3148891_-\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|234787	PRK00521, rbfA, 30S ribosome-binding factor RbfA.	5.61589e-39
NZ_CP051468.1\|WP_011338730.1\|3132223_3133501_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340850	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	1.00454e-121
NZ_CP051468.1\|WP_011338725.1\|3140083_3141397_+\|calcium-binding-protein	gnl\|CDD\|380205	NF033203, entero_EhxA, enterohemolysin EhxA. Members of this family are the RTX toxin called enterohemolysin or EhxA, because it is found in enterohemorrhagic Escherichia coli (EHEC) strains such as O157:H7.	1.50475e-24
NZ_CP051468.1\|WP_011338722.1\|3147741_3148479_-\|hypothetical-protein	gnl\|CDD\|226222	COG3698, COG3698, Predicted periplasmic protein [Function unknown].	2.6197e-83
NZ_CP051468.1\|WP_011338724.1\|3145471_3146548_-\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	3.44504e-130
NZ_CP051468.1\|WP_002721512.1\|3141719_3143870_-\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP051468.1\|WP_002721508.1\|3144560_3145073_-\|DUF1643-domain-containing-protein	gnl\|CDD\|377919	pfam07799, DUF1643, Protein of unknown function (DUF1643). The members of this family are all sequences found within hypothetical proteins expressed by various bacterial species. The region concerned is approximately 150 residues long.	1.88969e-65
NZ_CP051468.1\|WP_011338735.1\|3123612_3124866_+\|lytic-murein-transglycosylase	gnl\|CDD\|372592	pfam13406, SLT_2, Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.	4.42199e-145
NZ_CP051468.1\|WP_011338732.1\|3129211_3130513_-\|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit	gnl\|CDD\|130902	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family. Type I secretion is an ABC transport process that exports proteins, without cleavage of any signal sequence, from the cytosol to extracellular medium across both inner and outer membranes. The secretion signal is found in the C-terminus of the transported protein. This model represents the adaptor protein between the ATP-binding cassette (ABC) protein of the inner membrane and the outer membrane protein, and is called the membrane fusion protein. This model selects a subfamily closely related to HlyD; it is defined narrowly and excludes, for example, colicin V secretion protein CvaA and multidrug efflux proteins. [Protein fate, Protein and peptide secretion and trafficking].	5.93734e-77
NZ_CP051468.1\|WP_011338728.1\|3135674_3136916_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340850	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).	2.67569e-79
NZ_CP051468.1\|WP_002721525.1\|3128335_3129142_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	3.04702e-49

>NZ_CP051468.1|WP_017139984.1|3136915_3138961_-|hypothetical-protein
MNMRPDAFGEARAPAIACPPRPLDELRIVPLSTGLAAIYLDAPPAGGRRPRLAVTLDGRPVPSPSLSAALPLERGGLRHLVLFTQDMPELLARDLLLTLDGVPRAEARSEWLQPPLRPLPALVEGLAASGRTRFLKMLLTTAASLFSGHGAELAALAQRMLDLCAVPVARPLGAAAFGAGHAIRSHAWAEPPAPGAPVVALGRQIGRLAGCDARSDGGLLHLHLPPAARAEGDLVIFTPDPVRLPAPNKAAAPMTAWLNGRSPAIRAWALGRVRSAAAGDPAAQALLAEMQRPDLPVRLAVRSLCVAPGGLLYAFRLEDPERLVRTLRLEIAGRHLDLDLHRGPAGTGLCAGFAPLEAEAAPCRIQMVLGSGRITTMATVQPAAFDGSEPDGFAEVWQAWHRISGPPEVNPARVLAAIRSARAPRRIPVLVQRFGSPRTGRIALIAPAGAHPDLISARAAAVGAGGWQAEILLTLPEGPAAARMRDAAAAAAALHDLPHRLVLHDARAHPAEVLRAAAALIEGPLLLLGATVLPATPGWLEDWLRHLEETPALVTAGAVLDHEGAVWEGPLDLGAEGLLRPLDGLPARRLAGTSTSFPSPELAGLSRAGVMRLLASATGHADLAPALAELAAADRAAGTASPFRVSHPFRRFGGTAHPTGFAEALRGEELRRQALPAAEGL
>NZ_CP051468.1|WP_011338728.1|3135674_3136916_-|glycosyltransferase-family-4-protein
MALRILQIAHDHPDWTSGGTEIVAHDLHRALSRRGLDSRFLAAATSLQRPEAMAGSLGHLGEDMVLRTGGYDRFLMKRHDGLRWLESVRRLLTDAAPDVVHLHGLDRIGAEILPALRRFAPAARIVMTLHDYQIICPNEGLLLTRPDGSRCRGARPDSCRACFPELGADRHALRKTYLATLLQGVDCFLAPSRFLKDRFLDWGLPATKLQLMPNAVAPLALMQDKPRVRRDRFAFFGTLALHKGVLTLLEAAAQLKAEGAELRLAFHGGLRHPEPAFRTAFETALAAARPLAQHPGPYDRAALASRMADVDWVVVPSLWWENAPLVILEAQAAGRPVIASGIGGMAEMVKDSETGLLVPPGDAAALAEALRTAAGDADLWARLAAAQPRTSHERFVDAHLDLYRTLLEGRHAA
>NZ_CP051468.1|WP_011338729.1|3133497_3135678_-|hypothetical-protein
MTPADGSFLLPGSATVAEVRLSLVLPGGRSLLGLTSTEDLPRAGHAHWSGGQAAWQAEVWAHHAGFAGLALVEAALCERATLRGADGQAARIETPRRIEIAPEALAEFVREAGLMPREVLAFLLRALLADPALPPAEARAHRAFAAGFLQAAALPDGFIEILATPETDGLFAQGWAMSLGTGRSRIAKLDGDLSFCEAEIAAFARNDILPPGQGIALYCRDWRGQDHEAVQALIFDTEGEFRRLELVRGSVQHLSGSVASAHVARMLPRLSGPESSRRALRRICRPRYPGSDTLSATTLPIAAAFEAIYQAPDGGLLAMGWLLDPLSRVERVILKSDANLYAPLQDRWHAMPRPDLHEGFARDPRFANLLDPRDTMHGFVAYAPASRAKVEGAEVYLELVLDDNSCLFRPIAITPLAGRERLPALLAPISPEDPALGPLVERVLAPFLAGLPATPPRAIARRRATVPLGAEAPPRDIAAVMPFRTLAQLQPVFALLSGTPEAAALDLTLVSTSRAAQGLAERLDEAFRFYGLSGRLLLVPESESLLARMESGIAVSRGSHLLLWEPSALPSSSNWLARLLREAQWAQPPGLVSPRLVYEDGSICFGGGEEHGAGAQTICPQLGYPAAWLAQGRPRRTGFGAAEIALVGRAALEAAGGLTGRLFGDRMAHRDLADRLHATGSGTWCSGSVTFWALQEPSDRNDSFTTLMAKVDGALIAARARERLGP
>NZ_CP051468.1|WP_011338730.1|3132223_3133501_-|glycosyltransferase-family-4-protein
MKALVLSHAHPAFSIGGAQVASHNLFTGLKSLPGWQAHYMAGVGPPVARHDATPLMSLGQAPDETLFWTGDYDWFHLGTTDLDGLMRHFERFLSDLRPDVVNFHHVMGFGIQAIASVRRALGPVPIVMTLHEYLPICAHHGQMIKARSHSLCLRASASDCGLCFPELGAAAMKRRELFIKSFFDRVDAFVSPSRFLLTRFEDWGLPRQKLVMIENGLEGGPVAPPRPLAEGRPRNRFAYFGQLNPFKGIKVLVEAVTRIPDRIWGDAILYIFGGNLEHQPEEFQTQVRNLFRMAGRRLRFMGSYKSADLPHLMREVDWTIVPSTWWENAPVVIQEAFHHGRPIIASDIGGMAEKVRDGIDGLHFRVSNPESLAETMMRALRDPALWDRLRAGIEPPTDAASAAREHARLFERLLTRQGTAGANHG
>NZ_CP051468.1|WP_011338731.1|3130509_3132231_-|type-I-secretion-system-permease/ATPase
MADPAEPAGLYRLILREAALGAGAAAFVGFFVNLLHLALPLYNAQVYDRVIGSANLDTLVALTGLVAILLVFGAVLDVLRARIFAILAARLAGQLGQPVFVAAVETALRGGPTAAAEGMRAVADLRSFLAGGAIALPIDLTFTPVLLLVLFALDPAYGLIGLGGAAALAGTGIVTEILARRPVASALAAGGSVQAETATALRSAEVIAAMGMLPDIARRWRRAQARSLAAADRGQARAKALSSLARFLRTAIQIAVICTGTTLVVDQAATIGTIVAAMAIMSRLLLPFEHLIDGWRQWMDAAEAHGHLRRLLREGGSPRSSLPAPVGRALLVADRVTYIPAGQDLPLLRNVSFRIEPGELLGVIGPSGAGKSTLARLTVGLWPPSAGGLFLDGQSTFLHERTSFGRAVGYLPQEPLLLDGSVRDNIARFRDAPMDEVIAAARQAGVHELIGRLPRGYGTRLADAGARLSGGQRQRIALARAIFGDPQLLVLDEPNASLDAEGEAALVSAVEQARARGAAVLVVAQRMSVLAKADRLLVLREGAVTHYGPRAEVMAAIGPQRRPAPVPVAQACS
>NZ_CP051468.1|WP_011338732.1|3129211_3130513_-|HlyD-family-type-I-secretion-periplasmic-adaptor-subunit
MSAAGSWDDPAPPSYRPIFQAALVLILSLTVSLGSWAVYARLDGAVITQGVVLAESRRKTVENLEGGLLERLLVAPGDRVAAGQPVAQLATVQDRERLIQLEAEREGLLFDIWRLRTEAAGARVLDPATAPGPDAERTAAQLRLFQSRLHAHRDRIGSLDRQIELLIAQGAANDAQARAADLQIESWRAERADLVTLVDRGASPRQKLVELDRNITTLTGTREQYLALARAARADVERARMDRSTAGQLRLAEVAEQLAAAGRQLPGLEAQIRATRDVLERRTLRAPQAGLVVEVPTVTPGAVIGSGTAVMEIVPDLDHLVIQMRVPPEAIDNVRKGGLARVRLTAYRRALAPVVRGQVSFVSPDLIEDPRDGTTYFEARVTLDPESLAEQPDWVRLSAGMPVEVSVSTGERRAGDYLLEPILRHLRGALHDP
>NZ_CP051468.1|WP_002721525.1|3128335_3129142_-|CatB-related-O-acetyltransferase
MAQIPFDLKHADFARLAEVGLRLPGLREVKTLTQTSWIEAPTTIIGTVVSGAELQVGAFCSLSGGTLNNVHIGRYSSIAAGTIIGVHEHPTSWLTTSRTSYWPQVYGWDELIAPDRAAEIRAGKRPFTRSCPITEIGHDVWIGQGCFIKSGVRIGHGSVIGARATVTKDVPPYSIVLGTPGRVVRTRVPEPLIERLLAVEWWRYSIYDLFAAPFDDVARALDVIEDRIAEGAIKPYEAPLVTPADLAEPLGLAARLAARFPRPLARAS
>NZ_CP051468.1|WP_011338733.1|3127744_3128332_-|hypothetical-protein
MTLADPVPDKAKEAVSPLYGVVDVLRRDRIAGWVIDRRDPGASVTVEIRREGQRIASVPANRRRRDLEANRFGSGLYGFGAAIDPPLMEGMEFTVSVRAMAADGTEAILQPLSRVLEPSGEQRALARLLEEVAACRALLEAQQSLAERVERAQLRMETLWPEPDPVPPTGWGLRLLSLAALALALLSLTLSVMSL
>NZ_CP051468.1|WP_023003735.1|3124946_3127733_+|error-prone-DNA-polymerase
MPFVELSATSNFTFLTGASHPEELMRRAASLGLPALAIADENSVAGIVRAYGEAKEIARETGSAPRLIPAARIVVREGMSVTVLPRDRAAWGRLCRLLTLGRRAAPKGSCDLGFADLLAHAEGQEMLLHPPARSSGGWQTLAARLAAACPGRVALILAPHYAGQDRVRFERQALLAARLGIPTVASGLPILHHGARRRLADVLTAIRLGCRVDELGRRALVNGEQRLRSEAEMLRLYPGHEEAVFRSAEIAGRLDFCLSELRYEYPSEISKGESPADRLARLTREGLVWRFPAGVPEKIAAQARHELELIGKLGYEPYFLTVNDIVRFARDRGILCQGRGSAANSIVCYALGVTSVDPEVGTMVFERFVSEARNEPPDIDVDFEHERREEVIQHIYSRYGRDRAGLCATVIHYRGKRAVREVGRAMGLSEDTLTAMASQIWGWGGPGALTERRLREIGLDPNDRRLWLALQLIDEIQGFPRHLSQHVGGFVITEGRLDELVPIENAAMEGRTVICWDKDDIDMLGILKVDVLALGMLTCIRKAFDLIESHHHTSYTLATLPRDDSQTYDMLCRADSLGVFQVESRAQMNFLPRMRPRCFYDLVVQVAIIRPGPIQGDMVHPYIRRRNGQEDPHLPSDALGKVLGKTLGVPLFQEQAMQIAIIGANFSPEEADRLRRALATFKKHGNVTELKERFMNGMLANGYDKDFATRCFSQIEGFGSYGFPESHAASFALLVYASAWIKCHHPGIFACALLNAQPMGFYAPAQIVRDARAHGVIVLPPCINASLWDNVMERDREGRLALRLGFRQIKGVAEEEAQWIVAARGNGYRAVEDIWRRAGVPPATVTRLAEADCFAALGLTRREAQWQARALSGDRPLPLFAGDMDGEGIVEPEVVLREMTLGEEVVEDYVSFRLSLRSHPMALLRELV
>NZ_CP051468.1|WP_011338735.1|3123612_3124866_+|lytic-murein-transglycosylase
MRTFLLGLGLALAAAPGMADPVTVSQRPAARAEAAVTEAERAAQAGLEAWVIQFRPRALAAGIRPATFAAAFRDLRYDADAVARDRNQAEFNRTLWDYLDSAVSETRIAGGRAALVQHGALLGRIEARYGVPKEIVVAVWGMETSYGTRRGDHPLVGALATLAHDGRRARFFEEQLIAALKILDNGDVRPEAMTGSWAGAMGHTQFMPTSYLDFAVDFTGDGRRDIWSDDPSDALASTAAYLAKSGWRRGEPWGVEVRLPAGFDFAQSGKSLRQPAARWEALGVRRVDGSPLPAGEAALLLPAGAQGAAFLIYPNFRAIARYNPADAYVIGVGHLADRLKGAPAIAGGWPRGDRALASAERTELQRLLTAAGFDTGGADGMIGPNTLSALRAWQAARGLVADGYANEAVLNRLREGA
>NZ_CP051468.1|WP_011338725.1|3140083_3141397_+|calcium-binding-protein
MELAVTTTTLPWAEPPGWLGSFFATGLRFESALIAPPWGALAMGSCGRDLLIASPFGSSLPGGPEGDVLVGLWGNDQLYGNGGNDLVRGGGGADILTGGTGNDLLAGGAGNDSLHGGTGANLLIGGAGDDLLDSRWSTDPDRGGLSFETWRAAKIGTGDEMHGGDGNDRIEASFGNDTLTGDAGDDVIRGQDGDDQLEGGEGQDTLMGDAGADVLSGGEGDDSLDGGLGDDRLDGGEGSDRLIGGNGNDVMDGGAARDVLFGGYGDDQITAGEGDDWVDGGGGDDLIDLGAGDDFVAAIEDLGRGDDVIFGGEGNDTMLGGRGCDQIDGGEGADVLNGGAGDDFLTGGAGADAFQMRSAHGIDTIADFSSEDVLTITRNINGIGGADGLVSVEELTGRIEDLGSDCFLDLGGGNGAMFLGITADELGGLLPAHLEYL
>NZ_CP051468.1|WP_002721512.1|3141719_3143870_-|polyribonucleotide-nucleotidyltransferase
MFNVTKKSIEWGGETLTLETGKVARQADGSVIATLGETSVMANVTFAKAAKPGQDFFPLTVHYQERYYAAGKVPGGFFKREARPSEKETLTSRLIDRPIRPLFVDGFKNEVLLIVTVLSHDLVNEPDIVAMIAASAALTISGVPFMGPIGAARVGFAGGEYVLNPDVDDMQKLRENPEQRLDLVIAGTKDAVMMVESEAYELSEAEMLGAVKFGHEAMQPVIDMIIDFAEEAAHEPFDFSPPDYAALYAKVKSLGETQMRAAFAIREKQDRVNAIDAARAAIKAQLSEAELADENLGTAFKKLESSILRGDIINGGARIDGRDTKTVRPIISETSVLPRTHGSALFTRGETQALVVTTLGTGEDEQIIDALHGNSRSNFLLHYNFPPYSVGEVGRFGPPGRREIGHGKLAWRALQAVLPAATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGKWAVLTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEQALAQAKDGRMHILGEMSKALSSANSFSAYAPKIETLTIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKIASNDQAAIKKAYDMIWSIVAEPEEGQIYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIANKRLTHPNEVLKEGQEVKVKLLGFDERGKVRLGMKMVDQETGQEIQPEKKEKEEAGEA
>NZ_CP051468.1|WP_002721510.1|3144050_3144320_-|30S-ribosomal-protein-S15
MSITVEEKARLIKEYATKEGDTGSPEVQVAVLSSRIATLTEHFKAHKKDNHSRRGLLMMVAQRRKLLDYLKKKDEGRYTALIARLGLRR
>NZ_CP051468.1|WP_002721508.1|3144560_3145073_-|DUF1643-domain-containing-protein
MITRSFVKGDAPSTAVYSDCERYRYLLTRVWDPEGTKALFVMLNPSTATEFQNDPTVERCERRARTLGFGAFRVCNIFAWRDTDPKKMRAAPDPVGNPENDEAIAHSAPWADRIVCAWGAHGAFLDRGRQVEALLRATGLPLHHLGLNRDGQPKHPLYIGYDQQPILWDA
>NZ_CP051468.1|WP_011338724.1|3145471_3146548_-|pyridoxal-phosphate-dependent-enzyme
MDAQKIRTTEGRGRLYDSVLDTVGNTPVIRINNLSPEGVTIYVKAEFFNPAASVKDRLALNIIEAAERSGKLKPGMTVVEATSGNTGIGLAMVCAQKGYPLVITMSEAFSVERRRLMRLLGAKVVLTPRGGKGFGMYRKAQELAEANGWFLASQFETDANADIHEATTAREIVADFAGERLDWFVTGYGTGGTVTGVARVLRRERPEVKIVLSEPANAQLVASGVPQDRNADGTAASGHPAFEAHPIQGWTPDFIPKVLQEGLDAGAYDELIPVAGEDGMKWARELAAKEGILTGVSGGSTFAVARQVAERAPKGSVILAMLPDTGERYMSTPLFQAIGEDMNEEEKALSASTPSFQL
>NZ_CP051468.1|WP_011338723.1|3146768_3147674_-|tRNA-pseudouridine(55)-synthase-TruB
MGRTRKGRAISGWLVVDKPAGMTSTAVVNKVRWALEAQKAGHAGTLDPDATGVLAVALGEATKTVPYITDALKCYRFMVRLGLSTRTDDASGEVIATSEARPTDAEIEAALAAFRGEIQQVPPQFSAVKVEGERAYDLARDGERLDLAARPLWVESLEILSRPDADHVELEMVCGKGGYVRSIARDLGEALGCHGHVAWLRRTWSGPFEAEDGISVATIDELARSEALLSHVLPLAKGLADLPELPATPEGAARLRCGNPGMVIASDVEFGEEAWASFQGQPVAVGIYKSGELHPSRVFNL
>NZ_CP051468.1|WP_011338722.1|3147741_3148479_-|hypothetical-protein
MRTRLLAILLAVWPAACATAEPACRDLTFEDTRYSLCEAQAGDDIRIFQTAPDGRPYGSFERINSALEGEGRQLAFAMNAGMYHADRRPVGLLIEEEVERAPLVTSAGPGNFGLLPNGVFCVGDGFRVIESRAFAAERPTCRHASQSGPMLVIGGELHPRFLVDSDSRYIRNGVGVSADGRRAVFAISNRPVTFHEFGRLFRDELGLPEALYFDGSISRLYDRGARRSDWGTPMGPIVGLVVPKP
>NZ_CP051468.1|WP_011338721.1|3148468_3148891_-|30S-ribosome-binding-factor-RbfA
MGPMAHRSHTGTGPSQRQLRVGELIRRTLADVLNRGEIHDPELNRLSITVGEVRCSPDLKVATVHVMPLGGKDVEEAISLLSKHRGELRHHITRQMTLKYAPDLRFRPDETFDRLDETRRLFSDKTVMRDIRGGGEADED
>NZ_CP051468.1|WP_011338720.1|3149128_3149938_+|4-hydroxy-tetrahydrodipicolinate-reductase
MSDLPGIVVTGASGRMGQMLMKTVLASGKARLVGAVERPGSDWVGRDAGAAMGGAAVGVTVTDDPLAAFAQAQAVIDFTAPEATVQFAELAAQARAVHVIGTTGLEPAHLERLAWAAHHAVIVRAGNMSLGVNLLTRLTQKVAEALDEDWDIEVVEAHHRMKVDAPSGTALMLGEAAARGRGVDLAQARVSGRDGITGPRAPGSIGFSAIRGGDIVGEHDVIFAAAGERITLRHVATDRAIFARGALKAALWGQDRRPGQYDMMDVLGL
>NZ_CP051468.1|WP_043764254.1|3150150_3150330_-|DUF1674-domain-containing-protein
MTEETRKDLPPEALRALAEAEERRRRAKALDLPKEIGGRNGPEPVRFGDWEKKGIAIDF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	95476-95508	5	0.848
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	632715-632747	5	0.848
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NC_013860	Azospirillum sp. B510 plasmid pAB510f, complete sequence	12280-12312	6	0.818
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP051473	Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence	56659-56691	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP030276	Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence	56666-56698	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP015289	Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence	143791-143823	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP015212	Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence	55970-56002	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	295562-295594	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP022424	Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence	129769-129801	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP054617	Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence	259353-259385	7	0.788
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	74495-74527	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP007795	Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence	574872-574904	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	386509-386541	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032686	Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence	650861-650893	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032323	Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence	530049-530081	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	187783-187815	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032691	Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence	642177-642209	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032350	Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence	28970-29002	8	0.758
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP012917	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence	85846-85878	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	7565-7597	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032343	Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence	642345-642377	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	226471-226503	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	226777-226809	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	283055-283087	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032341	Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence	71875-71907	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP032326	Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence	179960-179992	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP015094	Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence	49820-49852	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	376760-376792	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP012916	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence	168166-168198	9	0.727
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP029357	Azospirillum sp. CFH 70021 plasmid unnamed2	227056-227088	10	0.697
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	274972-275004	10	0.697
NZ_CP051468_2	2.2\|3139573\|33\|NZ_CP051468\|PILER-CR	3139573-3139605	33	NZ_CP022366	Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence	376253-376285	10	0.697

1. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 5, identity: 0.848

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtcgccggcgccgccggacagg	Protospacer
 * *********** ************.****.

2. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 5, identity: 0.848

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtcgccggcgccgccggacagg	Protospacer
 * *********** ************.****.

3. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NC_013860 (Azospirillum sp. B510 plasmid pAB510f, complete sequence) position: , mismatch: 6, identity: 0.818

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
cgcagcaggtcgtccccggcgccgccgaacagc	Protospacer
   ** ********.*****************

4. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP051473 (Rhodobacter sphaeroides strain CH10 plasmid pRspCH10DE, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtctccgccgcctccgaaaatg	Protospacer
 * *************** **** ***** * .

5. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP030276 (Rhodobacter sphaeroides 2.4.1 plasmid pDE, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtctccgccgcctccgaaaatg	Protospacer
 * *************** **** ***** * .

6. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP015289 (Rhodobacter sphaeroides strain MBTLJ-20 plasmid a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtctccgccgcctccgaaaatg	Protospacer
 * *************** **** ***** * .

7. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP015212 (Rhodobacter sphaeroides strain MBTLJ-13 plasmid a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagaaggtcgtctccgccgcctccgaaaatg	Protospacer
 * *************** **** ***** * .

8. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagctggtcgtcgccggcgccgccgatcagg	Protospacer
 * **  ******* ************* ***.

9. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP022424 (Vitreoscilla filiformis strain ATCC 15551 plasmid pVF1, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagcacatcatcgccggcgccgccgaacaga	Protospacer
 * ** * .**.** ******************

10. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP054617 (Azospirillum oryzae strain KACC 14407 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.788

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
gcaagatggtcgtcaccggcgccgacccgcagc	Protospacer
****** ******* ********* *  .***

11. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tacagcaggtcgtcgccggcgccgccgacgagc	Protospacer
   ** ******** *************  **

12. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP007795 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p2, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
accatgacgtcgtcgccggctccgccgaacagc	Protospacer
.* * .* ****** ***** ***********

13. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
accacgaggtcggctccggcgcggccgaactgc	Protospacer
.* * .****** ********* ******* *

14. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032686 (Rhizobium sp. CCGE531 plasmid pRCCGE531c, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atcaggacatcgtttccggcgccgccgaagaga	Protospacer
.. **.* .****.*************** ***

15. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032323 (Azospirillum brasilense strain MTCC4035 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
accatgacgtcgtcgccggctccgccgaacagc	Protospacer
.* * .* ****** ***** ***********

16. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
tccagcacgtcgtctccggcgccgccgtcgagg	Protospacer
 * ** * *******************   **.

17. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032691 (Rhizobium sp. CCGE532 plasmid pRCCGE532c, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atcaggacatcgtttccggcgccgccgaagaga	Protospacer
.. **.* .****.*************** ***

18. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032350 (Azospirillum brasilense strain MTCC4039 plasmid p5, complete sequence) position: , mismatch: 8, identity: 0.758

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
acgaagatgtcgttgccggcgccgccgaacagc	Protospacer
.*.*..* *****. *****************

19. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP012917 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p3, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
cacaacacgtcgtcgccggcaccgccgaacagc	Protospacer
   *. * ****** *****.***********

20. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
cacaacacgtcgtcgccggcaccgccgaacagc	Protospacer
   *. * ****** *****.***********

21. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032343 (Azospirillum brasilense strain MTCC4038 plasmid p4, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
cacaacacgtcgtcgccggcaccgccgaacagc	Protospacer
   *. * ****** *****.***********

22. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atgtagacgtcgtcgccggcgccgccgatcaga	Protospacer
... ..* ****** ************* ****

23. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atgtagacgtcgtcgccggcgccgccgatcaga	Protospacer
... ..* ****** ************* ****

24. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atcagcgtgtcgttgccggcgccgccgaacagg	Protospacer
.. ** . *****. *****************.

25. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032341 (Azospirillum brasilense strain MTCC4038 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
aacagcgtgtcgtctccgtcgccgccgaagagg	Protospacer
.  ** . ********** ********** **.

26. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP032326 (Azospirillum brasilense strain MTCC4035 plasmid p5, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
accaggaggtcgtcgccggcgccgccgttgatc	Protospacer
.* **.******** ************   *

27. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP015094 (Pelagibaca abyssi strain JLT2014 plasmid pPABY6, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
aacagcgtgtcgtcgccggcgccgccgatcagc	Protospacer
.  ** . ****** ************* ***

28. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
cgcagcgtgtcgtttccggcgccgccggacagc	Protospacer
   ** . *****.*************.****

29. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP012916 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p2, complete sequence) position: , mismatch: 9, identity: 0.727

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
aacagcgtgtcgtctccgtcgccgccgaagagg	Protospacer
.  ** . ********** ********** **.

30. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP029357 (Azospirillum sp. CFH 70021 plasmid unnamed2) position: , mismatch: 10, identity: 0.697

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
atgtagacgtcgtcaccggcgccgccgaccagc	Protospacer
... ..* ****** ************* ***

31. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
aagggcaggtcgcgtccggcgccgccgaacccg	Protospacer
. ..* ******. ****************  .

32. spacer 2.2|3139573|33|NZ_CP051468|PILER-CR matches to NZ_CP022366 (Azospirillum sp. TSH58 plasmid TSH58_p04, complete sequence) position: , mismatch: 10, identity: 0.697

gcaagaaggtcgtctccggcgccgccgaacaga	CRISPR spacer
agcagaaggtcgttgccggcgccgccggcgatg	Protospacer
.  **********. ************.  * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

891106 : 910009

Bacillus_phage(40.0%)

protease,terminase,integrase,portal,capsid,head

attL 876990:877005|attR 893604:893619

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
876990:877005	attL	NA	NA	NA	NA
WP_011338075.1\|891106_892348_+\|integrase	site-specific integrase	B7SYF8	Stenotrophomonas_phage	2.9e-23	26.1
WP_011338074.1\|892367_892997_+	hypothetical protein	NA	NA	NA	NA
WP_017140250.1\|893075_893273_+	hypothetical protein	NA	NA	NA	NA
WP_011338073.1\|893272_893485_+	hypothetical protein	NA	NA	NA	NA
WP_011338072.1\|893705_895043_+	AAA family ATPase	A0A1B1INT2	uncultured_Mediterranean_phage	6.2e-56	37.1
893604:893619	attR	NA	NA	NA	NA
WP_011338071.1\|895205_895511_+	phage protein	NA	NA	NA	NA
WP_017140248.1\|895684_897163_+\|terminase	terminase	NA	NA	NA	NA
WP_011338069.1\|897153_897495_+	HNH endonuclease	A0A0S2GLI5	Bacillus_phage	3.7e-05	32.5
WP_017140247.1\|897479_898742_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_011338067.1\|898741_899296_+\|head,protease	HK97 family phage prohead protease	NA	NA	NA	NA
WP_011338066.1\|899297_900359_+\|portal	phage portal protein	NA	NA	NA	NA
WP_168746003.1\|900360_900867_+	hypothetical protein	NA	NA	NA	NA
WP_011338064.1\|900902_901409_+	hypothetical protein	NA	NA	NA	NA
WP_017140245.1\|901421_901700_-	hypothetical protein	NA	NA	NA	NA
WP_011338062.1\|902004_902916_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_011338061.1\|902956_904276_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_002720349.1\|904352_904823_-	CAP domain-containing protein	A0A0E3T7R5	Bacillus_phage	4.3e-12	34.4
WP_011338060.1\|904955_905600_-	ATP-binding cassette domain-containing protein	NA	NA	NA	NA
WP_011338059.1\|905596_907285_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_011338058.1\|907281_908487_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011338057.1\|908601_909210_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_002720342.1\|909376_910009_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	5.2e-61	61.0

DBSCAN-SWA_2

1126283 : 1142098

Paracoccus_phage(44.44%)

tail,protease,terminase,portal,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017140232.1\|1126283_1127864_+\|terminase	terminase	A0A286S1M9	Klebsiella_phage	8.5e-145	53.3
WP_011337912.1\|1127903_1129130_+\|portal	phage portal protein	Q6JIM9	Burkholderia_virus	7.5e-32	30.8
WP_011337911.1\|1129126_1129651_+\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	3.0e-30	50.6
WP_011337910.1\|1129723_1130833_+\|capsid	phage major capsid protein	NA	NA	NA	NA
WP_011337909.1\|1130856_1131198_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_162129770.1\|1131235_1131517_+\|head	phage head closure protein	NA	NA	NA	NA
WP_023003651.1\|1131517_1131982_+	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	4.1e-15	34.0
WP_023003649.1\|1131987_1132356_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_023003648.1\|1132419_1132839_+\|tail	phage major tail protein 2	NA	NA	NA	NA
WP_011337905.1\|1133004_1133490_+	HNH endonuclease	Q6XQ94	Escherichia_phage	4.2e-18	39.5
WP_023003646.1\|1133616_1133949_+	hypothetical protein	NA	NA	NA	NA
WP_023003642.1\|1134353_1136675_+	hypothetical protein	A0A2H4PI09	Pseudomonas_phage	8.6e-21	29.6
WP_011337903.1\|1136678_1137323_+	hypothetical protein	NA	NA	NA	NA
WP_023003640.1\|1137331_1138006_+	hypothetical protein	A0A0U2C133	Paracoccus_phage	7.1e-16	32.6
WP_023003639.1\|1138055_1138481_+	hypothetical protein	S4TR39	Salmonella_phage	1.3e-10	31.4
WP_162791925.1\|1138636_1142098_+	hypothetical protein	A0A0U2C146	Paracoccus_phage	3.9e-102	37.4

DBSCAN-SWA_3

1693033 : 1714552

Paracoccus_phage(40.0%)

tail,protease,tRNA,capsid,head

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011337526.1\|1693033_1694284_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	1.1e-65	37.0
WP_011337525.1\|1694525_1695119_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	9.5e-41	61.0
WP_002719643.1\|1695108_1695618_-	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	2.7e-44	59.4
WP_011337524.1\|1695766_1696960_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_011337523.1\|1697061_1697991_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_002719640.1\|1698269_1698572_+	Septum formation initiator precursor	NA	NA	NA	NA
WP_002719639.1\|1698794_1699784_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA
WP_011337522.1\|1699797_1701189_+	pyruvate dehydrogenase complex E1 component subunit beta	NA	NA	NA	NA
WP_011337521.1\|1701199_1702528_+	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase	NA	NA	NA	NA
WP_002719636.1\|1702627_1703434_-	serine O-acetyltransferase	NA	NA	NA	NA
WP_011337519.1\|1703843_1707734_-	phage host specificity protein	A0A0B5A7K5	Paracoccus_phage	2.3e-220	37.6
WP_009564474.1\|1707733_1708174_-	peptidase	A0A1V0DYB6	Dinoroseobacter_phage	1.5e-27	47.1
WP_011337518.1\|1708170_1709055_-	DUF2163 domain-containing protein	A0A0B5A5B8	Paracoccus_phage	7.2e-61	43.6
WP_011337517.1\|1709054_1709687_-	DUF2460 domain-containing protein	A0A0B5A2K3	Paracoccus_phage	6.1e-62	51.9
WP_017140162.1\|1709696_1710347_-\|tail	phage tail tape measure protein	D6PFD6	uncultured_phage	3.3e-10	28.1
WP_017140161.1\|1710339_1710540_-\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_002719628.1\|1710857_1711271_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_011337514.1\|1711308_1711707_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_011337513.1\|1711703_1712039_-\|head,tail	head-tail adaptor protein	NA	NA	NA	NA
WP_011337512.1\|1712038_1712638_-	hypothetical protein	NA	NA	NA	NA
WP_011337511.1\|1712732_1713929_-\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	3.6e-63	42.2
WP_043764141.1\|1713994_1714552_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	1.4e-30	49.3

DBSCAN-SWA_4

1811285 : 1844002

Tupanvirus(10.0%)

tail,integrase,portal,capsid,head,holin

attL 1815230:1815248|attR 1844950:1844968

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002719536.1\|1811285_1811666_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_011337447.1\|1811665_1812775_+	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_002719534.1\|1812847_1813009_-	hypothetical protein	NA	NA	NA	NA
WP_011337446.1\|1813081_1813636_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA
WP_011337445.1\|1813754_1814282_+	hypothetical protein	NA	NA	NA	NA
WP_011337444.1\|1814403_1816536_+	catalase	A0A2K9L572	Tupanvirus	2.1e-138	49.6
1815230:1815248	attL	NA	NA	NA	NA
WP_002719530.1\|1816571_1816826_+	hypothetical protein	NA	NA	NA	NA
WP_011337443.1\|1816936_1818259_+	cytochrome P450	NA	NA	NA	NA
WP_009564818.1\|1818450_1819476_-	L-threonine 3-dehydrogenase	R9TPW0	Vibrio_phage	5.0e-13	64.7
WP_011337442.1\|1819475_1820666_-	glycine C-acetyltransferase	V5LQ39	Emiliania_huxleyi_virus	1.1e-30	27.9
WP_011337441.1\|1820710_1822156_-	YdiU family protein	A0A075BSJ0	Microcystis_phage	2.2e-54	43.6
WP_002719525.1\|1822242_1822767_-	hypothetical protein	NA	NA	NA	NA
WP_011337440.1\|1822999_1824169_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_011337439.1\|1824165_1825584_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA
WP_011337438.1\|1825837_1826584_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011337437.1\|1826594_1827545_-	sugar kinase	NA	NA	NA	NA
WP_011337436.1\|1827560_1828538_-	ABC transporter permease	NA	NA	NA	NA
WP_011840754.1\|1828541_1829552_-	ABC transporter permease	NA	NA	NA	NA
WP_011337434.1\|1829552_1831061_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.8e-12	28.0
WP_011337433.1\|1831244_1832207_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011337432.1\|1832272_1832929_-	fuculose phosphate aldolase	NA	NA	NA	NA
WP_011337431.1\|1832933_1833698_-	glucose 1-dehydrogenase	A0A0M4JSW6	Mollivirus	8.0e-08	40.5
WP_002719513.1\|1833891_1834674_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_011337430.1\|1835023_1836841_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011337429.1\|1836915_1838109_+\|portal	phage portal protein	M1PLL1	Streptococcus_phage	1.5e-40	31.5
WP_011337428.1\|1838105_1838426_+	gene transfer agent family protein	NA	NA	NA	NA
WP_017140147.1\|1838422_1839958_+\|capsid	phage major capsid protein	B0VK33	Azospirillum_phage	5.0e-41	36.0
WP_011337426.1\|1839957_1840554_+	hypothetical protein	NA	NA	NA	NA
WP_011337425.1\|1840556_1840907_+	HNH endonuclease	Q38456	Bacillus_phage	5.5e-20	48.9
WP_011337424.1\|1840891_1842364_-	hypothetical protein	NA	NA	NA	NA
WP_023003570.1\|1842558_1842870_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_017140145.1\|1842883_1843276_+	HK97 gp10 family phage protein	A0A0U2C0P4	Paracoccus_phage	6.3e-09	40.5
WP_011337422.1\|1843268_1843685_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_011337421.1\|1843687_1844002_+\|head	phage head closure protein	NA	NA	NA	NA
1844950:1844968	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2148778 : 2172343

Rhodobacter_phage(23.08%)

tail,protease,terminase,integrase,portal,capsid,head

attL 2138502:2138519|attR 2168673:2168690

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2138502:2138519	attL	NA	NA	NA	NA
WP_029534501.1\|2148778_2149720_-\|integrase	tyrosine-type recombinase/integrase	I3UM24	Rhodobacter_phage	1.6e-66	46.0
WP_011337223.1\|2149803_2150034_-	helix-turn-helix domain-containing protein	I3UM25	Rhodobacter_phage	3.1e-16	62.9
WP_011337222.1\|2150109_2151921_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_017140113.1\|2152043_2152439_-	DUF2312 domain-containing protein	A0A1X9HX62	Ruegeria_phage	1.8e-24	61.6
WP_011337220.1\|2152438_2152771_-	hypothetical protein	NA	NA	NA	NA
WP_023003555.1\|2152767_2152965_-	hypothetical protein	NA	NA	NA	NA
WP_017140110.1\|2153410_2153701_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002719227.1\|2154117_2154375_+	hypothetical protein	NA	NA	NA	NA
WP_017140109.1\|2154371_2154620_+	hypothetical protein	NA	NA	NA	NA
WP_023003553.1\|2154616_2155168_+	DUF1937 family protein	NA	NA	NA	NA
WP_023003551.1\|2155207_2155858_+	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_017140108.1\|2156055_2156634_+	hypothetical protein	NA	NA	NA	NA
WP_011337213.1\|2156630_2157293_+	hypothetical protein	G8DGC1	Emiliania_huxleyi_virus	4.2e-37	40.6
WP_011337212.1\|2157399_2158299_+	AAA family ATPase	I3ULZ4	Rhodobacter_phage	3.9e-30	56.1
WP_017140107.1\|2158455_2158818_+	hypothetical protein	NA	NA	NA	NA
WP_011337210.1\|2158819_2160529_+\|terminase	terminase large subunit	A0A2H4J559	uncultured_Caudovirales_phage	6.2e-133	41.9
WP_011337209.1\|2160528_2161779_+\|portal	phage portal protein	M4QP41	Tetraselmis_viridis_virus	5.8e-80	40.3
WP_011337208.1\|2161775_2162615_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.4e-69	58.1
WP_011337207.1\|2162627_2163929_+\|capsid	phage major capsid protein	Q6JIM7	Burkholderia_virus	1.3e-79	43.1
WP_011337206.1\|2163999_2164434_+	hypothetical protein	NA	NA	NA	NA
WP_011337205.1\|2164430_2164772_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_011337204.1\|2164768_2165101_+\|head	phage head closure protein	NA	NA	NA	NA
WP_011337203.1\|2165100_2165658_+	hypothetical protein	A0A0U2C0P4	Paracoccus_phage	2.9e-15	37.3
WP_011337202.1\|2165661_2166042_+	DUF3168 domain-containing protein	A0A0U2BX31	Paracoccus_phage	3.8e-27	53.2
WP_011337201.1\|2166051_2166495_+	hypothetical protein	A0A2P1N076	Streptomyces_phage	1.8e-07	33.3
WP_011337200.1\|2166491_2166878_+	hypothetical protein	NA	NA	NA	NA
WP_023003549.1\|2166952_2167198_+	hypothetical protein	NA	NA	NA	NA
WP_017140106.1\|2167336_2172343_+	hypothetical protein	A0A0U4JEA4	Pseudomonas_phage	3.1e-47	52.5
2168673:2168690	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2438126 : 2447173

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002722650.1\|2438126_2439101_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.0e-52	42.3
WP_002722648.1\|2439110_2440775_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_002722646.1\|2440790_2441117_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.3e-19	54.4
WP_011336992.1\|2441408_2441966_+	superoxide dismutase family protein	NA	NA	NA	NA
WP_009563716.1\|2442072_2443365_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.5e-94	45.8
WP_011336991.1\|2443477_2444092_-	lytic transglycosylase domain-containing protein	A0A0S2SXL7	Bacillus_phage	3.8e-24	45.3
WP_011336990.1\|2444305_2444827_+	single-stranded DNA-binding protein	A0A0U2C0X4	Paracoccus_phage	4.6e-47	77.6
WP_011336989.1\|2444950_2447173_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	8.3e-114	40.9

DBSCAN-SWA_7

2569000 : 2588747

Paracoccus_phage(26.67%)

tail,terminase,integrase,portal,capsid,head

attL 2567395:2567409|attR 2572098:2572112

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2567395:2567409	attL	NA	NA	NA	NA
WP_017140053.1\|2569000_2570062_-\|integrase	tyrosine-type recombinase/integrase	H6WBN7	Rhodobacter_phage	4.0e-66	42.1
WP_011336930.1\|2570058_2570301_-	helix-turn-helix domain-containing protein	I3UM25	Rhodobacter_phage	5.4e-19	71.4
WP_017140052.1\|2570376_2572197_-	ParB N-terminal domain-containing protein	G8DH78	Emiliania_huxleyi_virus	2.7e-94	39.2
2572098:2572112	attR	NA	NA	NA	NA
WP_011336927.1\|2572319_2572715_-	DUF2312 domain-containing protein	A0A1X9HX62	Ruegeria_phage	2.7e-23	59.6
WP_011336926.1\|2572714_2573047_-	hypothetical protein	NA	NA	NA	NA
WP_011336925.1\|2573043_2573241_-	hypothetical protein	NA	NA	NA	NA
WP_009564675.1\|2573237_2573423_-	hypothetical protein	NA	NA	NA	NA
WP_043762677.1\|2573707_2574001_-	helix-turn-helix domain-containing protein	M4QZA2	Sulfitobacter_phage	3.7e-14	48.0
WP_043764066.1\|2574105_2574348_+	hypothetical protein	NA	NA	NA	NA
WP_011336923.1\|2574552_2575104_+	DUF1937 family protein	NA	NA	NA	NA
WP_023003515.1\|2575143_2575800_+	DUF1376 domain-containing protein	NA	NA	NA	NA
WP_002720775.1\|2576008_2576587_+	hypothetical protein	NA	NA	NA	NA
WP_017140049.1\|2576741_2577281_+	hypothetical protein	A0A0U2C0Z0	Paracoccus_phage	1.3e-09	34.4
WP_017140048.1\|2577384_2577798_+	HNH endonuclease	A0A2D1GNP5	Pseudomonas_phage	1.1e-19	42.9
WP_011336919.1\|2578062_2578500_+\|terminase	P27 family phage terminase small subunit	NA	NA	NA	NA
WP_011336918.1\|2578486_2580145_+\|terminase	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	1.7e-79	32.3
WP_011336917.1\|2580463_2581336_+	EamA family transporter	NA	NA	NA	NA
WP_017140047.1\|2581482_2582718_+\|portal	phage portal protein	Q6DMU2	Streptococcus_phage	6.4e-23	25.8
WP_011336915.1\|2582714_2583674_+	S49 family peptidase	I3ULZ8	Rhodobacter_phage	3.0e-20	36.2
WP_011336914.1\|2583684_2584428_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_011336913.1\|2584681_2586016_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	7.1e-52	37.4
WP_011336912.1\|2586148_2586439_+	hypothetical protein	NA	NA	NA	NA
WP_011336911.1\|2586443_2586950_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_011336910.1\|2586946_2587279_+\|head,tail	head-tail adaptor protein	A0A0U2BXJ0	Paracoccus_phage	2.0e-16	44.5
WP_011336909.1\|2587275_2587749_+	hypothetical protein	A0A0U2C0P4	Paracoccus_phage	1.1e-26	51.9
WP_011336908.1\|2587745_2587913_+	hypothetical protein	NA	NA	NA	NA
WP_011336907.1\|2587916_2588297_+	DUF3168 domain-containing protein	A0A0U2BX31	Paracoccus_phage	2.0e-28	55.6
WP_011336906.1\|2588306_2588747_+	hypothetical protein	A0A2P1N076	Streptomyces_phage	2.5e-06	34.4

DBSCAN-SWA_8

2595418 : 2603995

Pseudomonas_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168746008.1\|2595418_2596903_+	hypothetical protein	A0A0S3UG21	Pseudomonas_phage	3.6e-12	30.2
WP_011336900.1\|2596909_2597227_+	hypothetical protein	NA	NA	NA	NA
WP_011336899.1\|2597230_2597569_+	hypothetical protein	NA	NA	NA	NA
WP_011336898.1\|2597702_2598020_+	hypothetical protein	I3UM16	Rhodobacter_phage	2.1e-23	58.9
WP_011336897.1\|2598090_2598480_-	response regulator	NA	NA	NA	NA
WP_011336896.1\|2598492_2599491_-	PAS domain-containing protein	NA	NA	NA	NA
WP_011336895.1\|2599892_2600699_+	DNA adenine methylase	A0A291AUP9	Sinorhizobium_phage	9.8e-81	56.6
WP_011336894.1\|2600752_2601562_+	hypothetical protein	A0A0B5A5A2	Paracoccus_phage	3.8e-64	50.2
WP_011336893.1\|2601574_2602057_+	hypothetical protein	F8TVB7	EBPR_siphovirus	7.1e-10	47.0
WP_011336892.1\|2602270_2602915_+	hypothetical protein	NA	NA	NA	NA
WP_160384111.1\|2602918_2603995_+	ImmA/IrrE family metallo-endopeptidase	A0A0U4JD08	Gordonia_phage	9.2e-42	34.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051470

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP051469

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP051468

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection