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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP051464 Bacillus mojavensis strain UCMB5075 chromosome, complete genome 2 crisprs csa3,cas3,DEDDh,WYL,DinG 0 5 9 0

Results visualization

1. NZ_CP051464
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP051464_1 619324-620151 Orphan NA
19 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP051464_2 2958099-2958205 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP051464_1 1.19|620107|27|NZ_CP051464|CRT 620107-620133 27 NZ_CP032347 Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence 426814-426840 3 0.889
NZ_CP051464_1 1.13|619828|27|NZ_CP051464|CRT 619828-619854 27 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1180708-1180734 4 0.852
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MK967397 Mycobacterium phage Mahavrat, complete genome 53567-53593 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MK224592 UNVERIFIED: Mycobacterium phage Henu3, complete genome 59714-59740 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 KY471267 Mycobacterium phage SassyB, complete genome 53496-53522 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MT889374 Mycobacterium phage Firehouse51, complete genome 56567-56593 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MH576962 Streptomyces phage Satis, complete genome 100904-100930 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MN735431 Mycobacterium phage Hegedechwinu, complete genome 56135-56161 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MH051257 Mycobacterium phage OwlsT2W, complete genome 54943-54969 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MK620894 Streptomyces phage Kradal, complete genome 100908-100934 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 NC_028961 Mycobacterium phage PopTart, complete genome 53496-53522 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MH155866 Mycobacterium phage Byougenkin, complete genome 53086-53112 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MH632119 Mycobacterium phage Harley, complete genome 56771-56797 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MG925354 Mycobacterium phage Ogopogo, complete genome 55265-55291 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MN369752 Mycobacterium phage Flathead, complete genome 56070-56096 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 KR824843 Mycobacterium phage Ovechkin, complete genome 56739-56765 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MN310545 Mycobacterium phage Nitzel, complete genome 53258-53284 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MH727548 Mycobacterium phage Galactic, complete genome 56262-56288 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 MF668287 Mycobacterium phage Wachhund, complete genome 52915-52941 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 JN020142 Mycobacterium phage Mutaforma13, complete genome 56102-56128 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 KX610764 Mycobacterium phage Kersh, complete genome 58592-58618 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 KF114874 Mycobacterium phage Bobi, complete genome 57608-57634 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 NC_042323 Mycobacterium virus Mozy, complete genome 56067-56093 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 JF937098 Mycobacterium virus Ibhubesi, complete genome 53640-53666 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 NC_008205 Mycobacterium phage PMC, complete genome 55093-55119 5 0.815
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 DQ398050 Mycobacterium virus PMC, complete genome 55093-55119 5 0.815
NZ_CP051464_1 1.12|619783|27|NZ_CP051464|CRT 619783-619809 27 NZ_CP021082 Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence 29817-29843 6 0.778
NZ_CP051464_1 1.14|619873|27|NZ_CP051464|CRT 619873-619899 27 NZ_CP032347 Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence 426814-426840 6 0.778
NZ_CP051464_2 2.1|2958123|59|NZ_CP051464|CRISPRCasFinder 2958123-2958181 59 NC_020451 Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence 1961-2019 10 0.831
NZ_CP051464_2 2.1|2958123|59|NZ_CP051464|CRISPRCasFinder 2958123-2958181 59 NC_048753 Lactobacillus phage 3-521, complete genome 13555-13613 14 0.763

1. spacer 1.19|620107|27|NZ_CP051464|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 3, identity: 0.889

-tgacgtcggaccagccggagcaacggg	CRISPR spacer
gtgtcg-cggaccagccggggcaacggg	Protospacer
 ** ** ************.********

2. spacer 1.13|619828|27|NZ_CP051464|CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 4, identity: 0.852

ggacgcaggaccagccggagcgacggg	CRISPR spacer
ggtggcaggaccagccggaccgacagg	Protospacer
**  *************** ****.**

3. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MK967397 (Mycobacterium phage Mahavrat, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

4. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MK224592 (UNVERIFIED: Mycobacterium phage Henu3, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

5. spacer 1.14|619873|27|NZ_CP051464|CRT matches to KY471267 (Mycobacterium phage SassyB, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

6. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MT889374 (Mycobacterium phage Firehouse51, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

7. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MH576962 (Streptomyces phage Satis, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
ccacgccggtccagccggaggaacgcg	Protospacer
  ******* ********** **** *

8. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MN735431 (Mycobacterium phage Hegedechwinu, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

9. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MH051257 (Mycobacterium phage OwlsT2W, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

10. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MK620894 (Streptomyces phage Kradal, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
ccacgccggtccagccggaggaacgcg	Protospacer
  ******* ********** **** *

11. spacer 1.14|619873|27|NZ_CP051464|CRT matches to NC_028961 (Mycobacterium phage PopTart, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

12. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MH155866 (Mycobacterium phage Byougenkin, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

13. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MH632119 (Mycobacterium phage Harley, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

14. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MG925354 (Mycobacterium phage Ogopogo, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

15. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MN369752 (Mycobacterium phage Flathead, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

16. spacer 1.14|619873|27|NZ_CP051464|CRT matches to KR824843 (Mycobacterium phage Ovechkin, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

17. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MN310545 (Mycobacterium phage Nitzel, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

18. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MH727548 (Mycobacterium phage Galactic, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

19. spacer 1.14|619873|27|NZ_CP051464|CRT matches to MF668287 (Mycobacterium phage Wachhund, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

20. spacer 1.14|619873|27|NZ_CP051464|CRT matches to JN020142 (Mycobacterium phage Mutaforma13, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

21. spacer 1.14|619873|27|NZ_CP051464|CRT matches to KX610764 (Mycobacterium phage Kersh, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

22. spacer 1.14|619873|27|NZ_CP051464|CRT matches to KF114874 (Mycobacterium phage Bobi, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

23. spacer 1.14|619873|27|NZ_CP051464|CRT matches to NC_042323 (Mycobacterium virus Mozy, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

24. spacer 1.14|619873|27|NZ_CP051464|CRT matches to JF937098 (Mycobacterium virus Ibhubesi, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

25. spacer 1.14|619873|27|NZ_CP051464|CRT matches to NC_008205 (Mycobacterium phage PMC, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

26. spacer 1.14|619873|27|NZ_CP051464|CRT matches to DQ398050 (Mycobacterium virus PMC, complete genome) position: , mismatch: 5, identity: 0.815

ggacgccggaccagccggagcaacggg	CRISPR spacer
caacgcccgcccagccggagcaacgtg	Protospacer
 .***** * *************** *

27. spacer 1.12|619783|27|NZ_CP051464|CRT matches to NZ_CP021082 (Deinococcus ficus strain CC-FR2-10 plasmid pDFI1, complete sequence) position: , mismatch: 6, identity: 0.778

gccgtccggagcaacaggagtcacggg	CRISPR spacer
aggggccggagccacaggagtcacggt	Protospacer
.  * ******* ************* 

28. spacer 1.14|619873|27|NZ_CP051464|CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 6, identity: 0.778

ggacgccggaccagccggagcaacggg	CRISPR spacer
gtgtcgcggaccagccggggcaacggg	Protospacer
* ..  ************.********

29. spacer 2.1|2958123|59|NZ_CP051464|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 10, identity: 0.831

cagcttggaaggctgaggttttaccactaaactacacccgcgattttatttggggcgat	CRISPR spacer
cagcttggaaggctgaggttttaccactaaactacacccgcattttagttatggcccgg	Protospacer
*****************************************. *** .**  ** * . 

30. spacer 2.1|2958123|59|NZ_CP051464|CRISPRCasFinder matches to NC_048753 (Lactobacillus phage 3-521, complete genome) position: , mismatch: 14, identity: 0.763

cagcttggaaggctgaggttttaccactaaactacacccgcg-attttatttggggcgat	CRISPR spacer
cagcttggaaggctgtggttttaccactaaactatacccgcgtgaactactcgtcataa-	Protospacer
*************** ******************.******* .  .**.*.*  ...* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 301358 : 309341 9 Caulobacter_phage(50.0%) NA NA
DBSCAN-SWA_2 685233 : 693598 8 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 1221883 : 1255789 39 Planktothrix_phage(20.0%) tRNA,coat NA
DBSCAN-SWA_4 1289026 : 1368008 89 Bacillus_phage(32.43%) tail,protease,capsid,portal,holin,coat,plate,terminase NA
DBSCAN-SWA_5 1805285 : 1812245 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_6 2223170 : 2229377 9 Staphylococcus_phage(66.67%) NA NA
DBSCAN-SWA_7 2588561 : 2661818 72 Bacillus_phage(53.57%) tail,protease,tRNA,head,capsid,holin,portal,coat,terminase NA
DBSCAN-SWA_8 2665466 : 2691503 33 Bacillus_phage(53.85%) NA NA
DBSCAN-SWA_9 3648314 : 3705483 56 Enterobacteria_phage(20.0%) tRNA,protease,bacteriocin,coat NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage