CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP051514	Paraburkholderia aromaticivorans strain AR20-38 chromosome 1, complete sequence	0 crisprs	c2c9_V-U4,RT,PD-DExK,Cas14u_CAS-V	0	0	20
NZ_CP051516	Paraburkholderia aromaticivorans strain AR20-38 chromosome 3, complete sequence	2 crisprs	RT,cas3,WYL,csa3,DinG,DEDDh	1	0	5
NZ_CP051515	Paraburkholderia aromaticivorans strain AR20-38 chromosome 2, complete sequence	5 crisprs	csa3,cas3,DinG	1	2	1
NZ_CP051517	Paraburkholderia aromaticivorans strain AR20-38 plasmid unnamed1	0 crisprs	csa3	0	0	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051516_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051516_1

1988640-1988782

Orphan

Consensus_repeat	Method
CGAAAACCGCCGTAACGAAAACC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP051516_1

>merge|NZ_CP051516|1|1988640-1988782|CRISPRCasFinder
CGAAAACAGCGGATGCGAAAGACCGCGGCGTAAAAAGCGGCGGCGCAGAGACAGGCGGCGCGAAGGTCAGTGCCGCGAAAACCGCCGTAACGAAAACCGCCGTAACGAAAACCGCCGTAACGAAAACCGCCGTAACGAAAACC

>NZ_CP051516|1|1|1988640-1988782|CRISPRCasFinder
CGAAAACAGCGGATGCGAAAGAC	CGCGGCGTAAAAAGCGGCGGCGCAGAGACAGGCGGCGCGAAGGTCAGTGCCG
CGAAAACCGCCGTAACGAAAACC	GCCGTAACGAAAACCGCCGTAA
CGAAAACCGCCGTAACGAAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051516.1\|WP_168793735.1\|1992641_1993199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793737.1\|1994045_1994774_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226970
NZ_CP051516.1\|WP_168793724.1\|1978978_1980163_+\|acetyl-CoA-C-acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|181625
NZ_CP051516.1\|WP_168793732.1\|1989791_1990097_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793734.1\|1991256_1992279_+\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176214
NZ_CP051516.1\|WP_168793725.1\|1980212_1980863_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793721.1\|1975466_1976489_+\|tRNA-dihydrouridine-synthase	unknown	unknown	gnl\|CDD\|223120
NZ_CP051516.1\|WP_168793738.1\|1994932_1997446_+\|AsmA-family-protein	unknown	unknown	gnl\|CDD\|225529
NZ_CP051516.1\|WP_168793728.1\|1983064_1983904_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP051516.1\|WP_168793740.1\|1997716_1998211_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793722.1\|1976570_1977956_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl\|CDD\|237838
NZ_CP051516.1\|WP_168793736.1\|1993242_1994049_-\|iron-export-ABC-transporter-permease-subunit-FetB	unknown	unknown	gnl\|CDD\|377092
NZ_CP051516.1\|WP_168793729.1\|1984258_1985512_+\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP051516.1\|WP_168793726.1\|1981004_1982189_+\|cystathionine-beta-lyase	unknown	unknown	gnl\|CDD\|180810
NZ_CP051516.1\|WP_168793723.1\|1977959_1978910_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP051516.1\|WP_168793730.1\|1985643_1986663_+\|Ku-protein	unknown	unknown	gnl\|CDD\|238408
NZ_CP051516.1\|WP_168793739.1\|1997445_1997613_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793727.1\|1982369_1982819_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051516.1\|WP_168793733.1\|1990136_1991093_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP051516.1\|WP_168793741.1\|1998613_2000233_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|226702

Protein	Function_ID	Function_description	E-value
NZ_CP051516.1\|WP_168793737.1\|1994045_1994774_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226970	COG4619, COG4619, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	4.96854e-71
NZ_CP051516.1\|WP_168793724.1\|1978978_1980163_+\|acetyl-CoA-C-acyltransferase-family-protein	gnl\|CDD\|181625	PRK09051, PRK09051, beta-ketothiolase BktB.	0
NZ_CP051516.1\|WP_168793723.1\|1977959_1978910_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	1.96285e-99
NZ_CP051516.1\|WP_168793734.1\|1991256_1992279_+\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176214	cd08252, AL_MDR, Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_CP051516.1\|WP_168793721.1\|1975466_1976489_+\|tRNA-dihydrouridine-synthase	gnl\|CDD\|223120	COG0042, COG0042, tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis].	1.74272e-88
NZ_CP051516.1\|WP_168793738.1\|1994932_1997446_+\|AsmA-family-protein	gnl\|CDD\|225529	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane].	3.21123e-88
NZ_CP051516.1\|WP_168793728.1\|1983064_1983904_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.29787e-87
NZ_CP051516.1\|WP_168793722.1\|1976570_1977956_+\|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl\|CDD\|237838	PRK14862, rimO, 30S ribosomal protein S12 methylthiotransferase RimO.	0
NZ_CP051516.1\|WP_168793736.1\|1993242_1994049_-\|iron-export-ABC-transporter-permease-subunit-FetB	gnl\|CDD\|377092	pfam03649, UPF0014, Uncharacterized protein family (UPF0014).	3.5683e-103
NZ_CP051516.1\|WP_168793729.1\|1984258_1985512_+\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	6.09769e-95
NZ_CP051516.1\|WP_168793726.1\|1981004_1982189_+\|cystathionine-beta-lyase	gnl\|CDD\|180810	PRK07050, PRK07050, cystathionine beta-lyase; Provisional.	0
NZ_CP051516.1\|WP_168793733.1\|1990136_1991093_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.96932e-86
NZ_CP051516.1\|WP_168793730.1\|1985643_1986663_+\|Ku-protein	gnl\|CDD\|238408	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku. The alignment includes the core domain shared by the prokaryotic YkoV-like proteins and the eukaryotic Ku70 and Ku80. The prokaryotic Ku homologs are predicted to form homodimers. It is proposed that the Ku homologs are functionally associated with ATP-dependent DNA ligase and the eukaryotic-type primase, probably as components of a double-strand break repair system.	4.54638e-122
NZ_CP051516.1\|WP_168793741.1\|1998613_2000233_+\|histidine-kinase	gnl\|CDD\|226702	COG4251, COG4251, Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms].	4.25775e-42

>NZ_CP051516.1|WP_168793730.1|1985643_1986663_+|Ku-protein
MPHMIWKGAISFGLVHVPVQLYPATQSEKVGFNLLDKRTIDPIGYKQINKRSGKDVTRDNIVRGFEYEKDKYVVLSDDEIRSANPESTQTVDILAFVDAPDISFLYLDTPYFLTPDRKGEKVYALLREAMKASGKIGVASVVLHNKQHLAALIPVGPVLALNTLRWAAEVRDFDEFKLPADGVKAAGVSARELDMAKKLIDDMSDKWDPSQYHDTFRDDIMALVDRKIRAGKTEEITEVEAPHESRQSADILDLSDLLKRSLGRGKSKPAAGGRKRAADDAGDKDGADAEAETPARKKPRTARSAGTTTRSRGSGTSTSGRASAKTSSAPAARKRRAAA
>NZ_CP051516.1|WP_168793729.1|1984258_1985512_+|cytochrome-P450
MPPATASDASTLARDFDLRHLNPAFHADPYPVYHALRAHEPVKRMPDGSLFLTRFRDVQAVYRDAKTFSSDKTVEFKPKYGDSPLYAHHTTSLVFNDPPRHTRVRKLIAGALTARAIAAMEPGLVRLVDGLLDAAAERGRIDLIGEFASAIPVEIIGNLLDVPHAEREPLRDWSLAILGALEPSLTEAQFERGNRAVNEFVGYLRDLVARRRREPGDPQHDVLTRLIQGEEGGEQLSEAELLQNCIFILNAGHETTTNLIGNGLVTLTQWPEQRAALLHEPSLIESAVEECLRFESSNQLGNRMATVDTEIGGVAVARGTPVTLCIGAANRDPEQFADPDRFDIRRDPNRHLAFGFGIHQCAGLSLARLEARIAIGRFVQRFPAYRLDGEPTRGGRVRFRGFAEVPLELEPAASRKA
>NZ_CP051516.1|WP_168793728.1|1983064_1983904_-|phosphoserine-phosphatase-SerB
MNLVIQSPAPLSADHHKALVALARGSHASVVDANAIRIADANVAQRADLDVYCGTHQLDYAFVEAGRQLRDFGLVAMDMDSTLITIECIDEIADFCGLKAEVAAITEASMRGEIKDFNESLTRRVALLEGLDASALERVYEERLQLSPGAERMLAGAKAAGLKTLLVSGGFNFFTEKLKARLGLDFTRANTLEIVDGKLTGKVIGEIVNADVKARTLRETCAHLGIEPSRAIAMGDGSNDLKMMAEAGLSVAFRAKPVVREAASVAFNHVGLDGLLRLF
>NZ_CP051516.1|WP_168793727.1|1982369_1982819_+|hypothetical-protein
MNLFFWMLLNLGVPIIGPIFTLALVAPAHGWRVAKALIAGSVKDGQLFWCAIGLFASAVYEAVTALERGRGEASVLACWLVGLCVLAFTCSSLVMSGLVNPHSGRARAGALQRNSLFADGSFSPTEIVISIFFTVIAAALLASLHVQLI
>NZ_CP051516.1|WP_168793726.1|1981004_1982189_+|cystathionine-beta-lyase
MTQSKLQRGLQTRIVRADDQLTPGFESFSMPVTRASTVVFPDLATMRALDWKNDAQWRYGLHATPTSLALAQRLATIEGGNHALLQPSGLSSISNVYFGLVKAGDDVLIPDNVYSPNRDHGDWLARDFGITVRYYDPMIGAGIADLIQPNTRLIWLEAPGSVTMEVADVPAITAVARARNVVTAIDNTWSAGLGFRPFDHGVDISVQALTKYQSGGGDVLMGATITVDRELHLKLKAARMRMGIGVSSDDCSLILRSLPTMQLRFEQHDRAALGLAKWLKTRPEIAAVLHPALSDCPGHEFYERDFTGAGGLFSVVFDGRYSAAQIDTFCESLELFSLGWSWGGAHSLVMPYNVASMRTAGQWPHGGTLVRFYIGLEAEADLRADMEQSLAALG
>NZ_CP051516.1|WP_168793725.1|1980212_1980863_+|hypothetical-protein
MRELNAIRGAVRRRGWLVASAAVLLCAGAATMLPAQAWAESDAVKELAAPPPIQLPLKPSPEFAKFPRYAGMLGSRQIVLKLGPKSDDPSGVHGEYQFTDTGAVILIAGDRDGNTLEVEESNDGTHITGNWVGKFAADGSVAGDRMNVDDSDPQPFDLKPLAAGQAVPPPGAPATATAANKPTAQPSAGAVTAPASSAAATGGRAVGGVSNLQTGE
>NZ_CP051516.1|WP_168793724.1|1978978_1980163_+|acetyl-CoA-C-acyltransferase-family-protein
MERDVVVVSGVRTAIGGFGGSLKDFSPTDLGARVVREVLARANVSGDEVGHVVFGNVVHTEPKDMYLARVAAINGGVAQHAPALTVNRLCGSGLQAIISAAQSVLLGDADIAIGGGAENMSRAPYTMPAARFGQRMGDARLVDMMVGALNDPFQSIHMGVTAENVARKYDISREVQDALALESHRRAANAITSGYFKEQILPITIPSKKGDVVFDTDEHARMNASAEDFSKLKPVFAKENGTVTAGNASGINDAAAAVVLMERSVAEQRGIKPLARLVSYAHAGVDPAYMGIGPVPATRKALERAGLTVADLDVIEANEAFAAQACAVSKELGFDPAKVNPNGSGISLGHPIGATGALITVKALYELQRIGGRYALVTMCIGGGQGIAAIFERI
>NZ_CP051516.1|WP_168793723.1|1977959_1978910_+|sugar-kinase
MTASTTAAPQAGLPEILALGEAMIEFNQSAKDQPNYLQGFGGDTSNFCIAAARQGASTGFVSAVGADHFGRLLVDLWKCEQVDTSLVRVDPQASTGVYFVSHGPNGHAFDYLRAGSAASRYAPRDLPLEAIAAAKVVHLSGISLAISLSACDAALEAIAHARANGGRVSFDTNLRLKLWPLARARAVMLEAIRQTDICLPSWDDVTDLTGLTGRDEIVDFLLSHGPSVVALKLGKEGSYIATPNERRVVPGHVVNAVDATGAGDCFGGAFIARIVAGDDPFAAARYANVAAALSTQGYGAVAPIPSRATVEQLLAG
>NZ_CP051516.1|WP_168793722.1|1976570_1977956_+|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MSATPTIAPTAAPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEALNENGKVIVTGCLGAKKSASGSGLIEEVHPKVLAVTGPHALGEVMQHVHAHLPKPHDPFIDLVPAAGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVADVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVGALGELAAQYGAWVRLHYVYPYPSVDDVIPMMAEGPYKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVMERVKKWREMCPDLTIRSTFIAGFPGETEEQFQTLLDFIREAELDRVGCFAYSPVEGATANELDGALPDEVREERRARFMEVAEEVSAKRIAKKVGKTLKVLVDEINADGGIGRTAADAPEIDGVVYIAPAVKASKRYKVGDFVSVKITGADGHDLWGEV
>NZ_CP051516.1|WP_168793721.1|1975466_1976489_+|tRNA-dihydrouridine-synthase
MSRLYLAPMEGLADYVLRDVLTGIGGFDGCVSEFVRVTGSLLPSRVYEREAPEVFEGGHTPNGTPMVIQLLGSDPEWMALNAAHAATLSPHGVDLNFGCPAKVVNQHGGGAMLLADPKQLNRIVSAVRAAVPAGIAVTAKMRLGVSDTSLAIDCATALAEGGAASLVVHARTRDHGYRPPAHWEWIARIDAAVDVPVIANGEVWTVADWERCRAVSGCADVMIGRGAVSDPFLALRIRGLMDRFPSDGDWQDVLGHIAGYLRKLQARVASRHEHGRVKKWLSYLQRTWPQAAELHAAIRRVQDSHEILEVIERALGVGQLMATHQSRRLGQRDPADLAVV
>NZ_CP051516.1|WP_168793732.1|1989791_1990097_+|hypothetical-protein
MKTSPQSSDGDKQADPHAKKQPKSMQEAAAPLPHEADQNPESQHEDGPRHVGKQAHRDLERGLKDTDRRGGDEYQQKTQNDAQTDVNSDGNGAAGARGNKH
>NZ_CP051516.1|WP_168793733.1|1990136_1991093_-|LysR-family-transcriptional-regulator
MNHPVVSPTRTPPGERERLDLLDVALFVRAALLANVSAAGREFGLSAAVASCRIAQLEKLLGARLLHRTTRRISLTQDGEVFMTRAEALLDAAAAARASVGRAQAEPQGRLRVSMPTSFGRQHVSPVISEFLRRYPGVSVDLRLTDQLVDLVDAGIDVAIRVGVLKDSSLVARRLAVNRRVLCAAPAYLAARGTPHHPSDLVEHECMILSDQRDWAFVTPAGPLAVRVSGRLVTDNGEVIRDALLAGSGIALKSTWDVAPYLRSGELVSVLDSYPLAESVAIWAVYPSRSFVPPKTLAFIEFVAAHFGDPPYWDREPA
>NZ_CP051516.1|WP_168793734.1|1991256_1992279_+|zinc-binding-alcohol-dehydrogenase-family-protein
MKAVGLYRYLPIDQAEALIDVEIPKPEATGRDLLVKVEAISVNPVDTKVRAPKDTVEKTPRVLGWDAAGTVAAIGPEVTLFKVGDPVFYAGSITRPGANSEFHLVDERIVGRKPASLDFTHAAALPLTAITAWEALFDRLGVSPQGADEGRTVLIFGGAGGVGSVGIQLAKQLAQLKVIATASRPESAKWATELGADHIVDHFGDVPAQLKKLGIDQVDYVLMFNDTDKNFPAAAAVVKPQGSICTIVENSQSVPVELLKAKSAAFHWEFMFTRSMFGTPDMIEQHKLLTEVARLVDAGTLCTTVGQNLGAINAANLRRAHQLLEEGRAIGKLVLTGFEA
>NZ_CP051516.1|WP_168793735.1|1992641_1993199_+|hypothetical-protein
MSFRLSAVSVVASLACALAPGMLVPVARAATPITVTSQSALDGPIRYTVRVTSKQFGNSQETRTIRSGESDDFTWKTVPPGGPVPATDACPNYASLPTDTNGAMIRQTQIRFAPVVGGDGTATVQLSFQAQTPKGVKTVTSGGKTLKCPNDVSVSQILRFTMPVNGSTKTLTLSDGTEVAISAKR
>NZ_CP051516.1|WP_168793736.1|1993242_1994049_-|iron-export-ABC-transporter-permease-subunit-FetB
MTLQNLSLWDIAIAALLIVVNGVVSVALKLDLERKLAWAAVRTVVQLLAIGYVLGWVFRYDRWYVVLPLMIVMTLIAGFSGAQRGNHTYRGQRADSVLSIWVSSWLVAAVGLFVVIRIHPWYEPQYAIPILGMILGNTLTGVSLGIERMTEELTARRDRVDMALALGATRWEAAQAPARQAVRAGMMPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAASSTLGTVGAVLLTYRRLFSAEHRFLSARLVERTATRR
>NZ_CP051516.1|WP_168793737.1|1994045_1994774_-|ATP-binding-cassette-domain-containing-protein
MTDVPLVLADGIVRRDAVRGQTLLQPTTFALHAGDRVAITGPSGSGKSVFLRALALLDPLDAGRIMWHGAPVERVAIPRCRRNVAYIRQRPALLDGSVEDNLRYPFELRTYRDVRFDRARAASLAAQAGRGDDFLDKRASELSGGEAQIAALIRVLQLAPEVLLLDEPTASLDPESSHAIEGLVHAWFDADPGHHASIWVSHDPAQATRMSARHLTMRAGVLDETARREIPPAHQDHQEFGQ
>NZ_CP051516.1|WP_168793738.1|1994932_1997446_+|AsmA-family-protein
MAVSSTTGRRIGKIIAWLLAIIVILIVALTIFILTFDWNRARPYINDKVTQAIGRPFAINGDLKVGWRHPLGETGWRGWVPWPRFSAANITVGNPDWTKQPQFATLDEIDFQVKVLPLLAHDIVIPTINLVNPSVDLERVLDGRNNWTFKLASSSGPSEWKLDLHDIAFAKGNIALSDQQKKVDLQMAIDTLGQPIPIGEAMKQQEAASRSSSAQTIGKSGASKLTAQANAQAASEAAAADAAAASGASSTDITASGTTAATGASGGLVAGGSKGASEAVAAGASGAAVASASTSGASGASAASGAEGQAGAKQEIPPYAIGWTVKGTYNKTPVSGSGKVGGVLALQDANRPFPVQADVKAGDLHVGLVGTITDPAHLAAVDLRLWLQGNSMARLYSLTGVTLPDTPPYATEGRLVGQFKSTGNVFKYENFTGRVGGSDINGSLTYTARESRPLLQGELVSHLLQFSDLAPVIGADSNASKAKRGDATAQPSSKVLPVEEFRTDRWKAIDADVKFTGRRIVKDVNLPITDLYTHVVMTDGVLSLEPLKFGVAGGTLASDIHLDGSASPLKGRFTTSARHLKLKQLFPNFKTMQNALGEINGDAALTATGNSPAALAATSNGEVKALITDGTVSALLMEAAGLNVANVVYEKLFGKRDVKINCAAADFVATNGVLDSRVFALDTDDAVINIDGNVNLRDESMDLGVHPHTKGFRVFSLRSPLYVKGTFKDPHVGVNAAALALRGGAAIGLGLINPFAALIPLLAPSNNKPLPCTQMLEQVRQAPTAPPPGVKQQPKSAISLDGAPVNKSSDGASSPATTDKKKPAVMSPASAATYKGS
>NZ_CP051516.1|WP_168793739.1|1997445_1997613_+|hypothetical-protein
MPFILPSDWLSWSFGGGLSLILLWLISVPPARGHIDEVMTKQDKASAAHARRRIT
>NZ_CP051516.1|WP_168793740.1|1997716_1998211_-|hypothetical-protein
MRTLRFLQFFFRRIFMSFPKKRRRAKVDGDESFLAVLRHFKPFSQLDTKIARARAQDEPVLYAHVLPGLDVLLCSVRGAQPPYPAPAELRRRCIESITNALEQPLDGLENGGYWYEADGFGFLVFASRARGKILTEFGATRIGGARRGVRRQDAAGDAAPRSLR
>NZ_CP051516.1|WP_168793741.1|1998613_2000233_+|histidine-kinase
MKLFTKGLLLIAVPSVVELALLGVVFDTQEQTAQAAQRVTNSKQILYQSSAIVDPLLRQAARVRTGMVIGDASLIDRHTVWVDLGDRLSNLEVLVAGTPPQVGRVHKMQRAIDAYRAQTVAISQALHEGHRPTSFAALETGALPQQIAVFRDELAAFGDEASRLDAERSAALARRRDRQQYALIGAVLGSMLIWAATAVAFARSIGRRLEVLTDNAERLGSGRTLAPALSGNDEIAALDTVLHQTGARLREAEAEQAMLKTRLEARARELAAVNEELRQETQDNEMFIYSVSHDLRSPLVNLQGFSKELQVSCDELDSVVEAAKLPEAEHRRMAHILDGEVRESLQYLRTAVTRAAAIIDALLRISRAGRLEYQWQRVSVGRVVGRVVDALQGAIGQHAAVVTVRDLPPAWGDPGAIEQIFSNLIGNALNYLDPARNGRIEVGALEPEPVEPVEAGEPRAVRMRTYYVRDNGLGIPAAYMSKVFRAFQRLHGDVANGDGIGLAVVRRTVERHGGRVWVESAEGAGSTFFVVLPEQPARL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP051516_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051516_2

4491325-4491451

Orphan

Consensus_repeat	Method
TCGGCAATCGTATTCATGCGTAGGCTCCGGCGAGCGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051516_2

>merge|NZ_CP051516|2|4491325-4491451|CRISPRCasFinder
TCGGCAATCGTATTCATGCGTAGGCTCCGGCGAGCGCCTGATCGGAGCTGCCCACGTAGGCTTGAATCATGAGCGAGGTCTTTAACGTTTCGGCAATCGTATTCATGCGTGGGCTCCGGCGAGCGCC

>NZ_CP051516|2|2|4491325-4491451|CRISPRCasFinder
TCGGCAATCGTATTCATGCGTAGGCTCCGGCGAGCGCC	TGATCGGAGCTGCCCACGTAGGCTTGAATCATGAGCGAGGTCTTTAACGTT
TCGGCAATCGTATTCATGCGTGGGCTCCGGCGAGCGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051516.1\|WP_168795612.1\|4487273_4488245_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119323
NZ_CP051516.1\|WP_168795623.1\|4501207_4502713_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|182388
NZ_CP051516.1\|WP_168795608.1\|4479555_4481340_-\|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|223488
NZ_CP051516.1\|WP_012434827.1\|4499933_4500158_-\|DUF3717-domain-containing-protein	unknown	unknown	gnl\|CDD\|378869
NZ_CP051516.1\|WP_168795611.1\|4485588_4486755_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380556
NZ_CP051516.1\|WP_168795618.1\|4494372_4495911_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP051516.1\|WP_168795610.1\|4482605_4483766_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380556
NZ_CP051516.1\|WP_168789116.1\|4484141_4485505_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP051516.1\|WP_168795619.1\|4496054_4496954_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP051516.1\|WP_168795607.1\|4476657_4478616_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP051516.1\|WP_115781433.1\|4497903_4498395_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP051516.1\|WP_007180058.1\|4500386_4501073_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP051516.1\|WP_168795613.1\|4488244_4489129_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223633
NZ_CP051516.1\|WP_168795622.1\|4499537_4499828_+\|4a-hydroxytetrahydrobiopterin-dehydratase	unknown	unknown	gnl\|CDD\|234845
NZ_CP051516.1\|WP_168795617.1\|4492499_4494212_-\|choline-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_CP051516.1\|WP_132376528.1\|4478791_4479556_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP051516.1\|WP_168795621.1\|4498464_4499433_+\|phenylalanine-4-monooxygenase	unknown	unknown	gnl\|CDD\|237020
NZ_CP051516.1\|WP_168795614.1\|4489315_4490530_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380550
NZ_CP051516.1\|WP_168795609.1\|4481344_4482400_-\|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119324
NZ_CP051516.1\|WP_168795620.1\|4497299_4497836_+\|class-IV-adenylate-cyclase	unknown	unknown	gnl\|CDD\|143628

Protein	Function_ID	Function_description	E-value
NZ_CP051516.1\|WP_168795612.1\|4487273_4488245_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	3.34194e-66
NZ_CP051516.1\|WP_168795623.1\|4501207_4502713_+\|histidine-kinase	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	1.94842e-52
NZ_CP051516.1\|WP_168795608.1\|4479555_4481340_-\|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|223488	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.24851e-111
NZ_CP051516.1\|WP_012434827.1\|4499933_4500158_-\|DUF3717-domain-containing-protein	gnl\|CDD\|378869	pfam12512, DUF3717, Protein of unknown function (DUF3717). This family of proteins is found in bacteria. Proteins in this family are typically between 75 and 117 amino acids in length. There is a conserved AIN sequence motif. There are two completely conserved residues (L and Y) that may be functionally important.	5.11614e-31
NZ_CP051516.1\|WP_168795611.1\|4485588_4486755_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380556	cd06333, PBP1_ABC_RPA1789-like, type 1 periplasmic binding-protein component (CouP) of an ABC system (CouPSTU; RPA1789, RPA1791-1793), involved in active transport of lignin-derived aromatic substrates, and its close homologs. This group includes RPA1789 (CouP) from Rhodopseudomonas palustris and its close homologs in other bacteria. RPA1789 (CouP) is the periplasmic binding-protein component of an ABC system (CouPSTU; RPA1789, RPA1791-1793) that is involved in the active transport of lignin-derived aromatic substrates. Members of this group has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP).	1.46524e-154
NZ_CP051516.1\|WP_168795618.1\|4494372_4495911_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP051516.1\|WP_168795610.1\|4482605_4483766_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380556	cd06333, PBP1_ABC_RPA1789-like, type 1 periplasmic binding-protein component (CouP) of an ABC system (CouPSTU; RPA1789, RPA1791-1793), involved in active transport of lignin-derived aromatic substrates, and its close homologs. This group includes RPA1789 (CouP) from Rhodopseudomonas palustris and its close homologs in other bacteria. RPA1789 (CouP) is the periplasmic binding-protein component of an ABC system (CouPSTU; RPA1789, RPA1791-1793) that is involved in the active transport of lignin-derived aromatic substrates. Members of this group has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP).	6.5741e-153
NZ_CP051516.1\|WP_168789116.1\|4484141_4485505_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.31852e-47
NZ_CP051516.1\|WP_168795619.1\|4496054_4496954_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.5347e-41
NZ_CP051516.1\|WP_168795607.1\|4476657_4478616_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP051516.1\|WP_115781433.1\|4497903_4498395_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	4.39995e-41
NZ_CP051516.1\|WP_007180058.1\|4500386_4501073_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.38224e-71
NZ_CP051516.1\|WP_168795613.1\|4488244_4489129_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	1.40838e-73
NZ_CP051516.1\|WP_168795622.1\|4499537_4499828_+\|4a-hydroxytetrahydrobiopterin-dehydratase	gnl\|CDD\|234845	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated.	1.01309e-51
NZ_CP051516.1\|WP_168795617.1\|4492499_4494212_-\|choline-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_CP051516.1\|WP_132376528.1\|4478791_4479556_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	2.82501e-119
NZ_CP051516.1\|WP_168795621.1\|4498464_4499433_+\|phenylalanine-4-monooxygenase	gnl\|CDD\|237020	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed.	6.23686e-165
NZ_CP051516.1\|WP_168795614.1\|4489315_4490530_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380550	cd06327, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs). Periplasmic substrate-binding domain of active transport proteins found in gram-negative, gram-positive bacteria, and archaea. Members of this group are initial receptors in the process of active transport across cellular membrane, but their substrate specificities are not known in detail. However, they closely resemble the group of AmiC and active transport systems for short-chain amides and urea (FmdDEF), and thus are likely to exhibit a ligand-binding mode similar to that of the amide sensor protein AmiC from Pseudomonas aeruginosa. Moreover, this binding domain has high sequence identity to the family of hydrophobic amino acid transporters (HAAT), and thus it may also be involved in transport of amino acids.	0
NZ_CP051516.1\|WP_168795609.1\|4481344_4482400_-\|branched-chain-amino-acid-ABC-transporter-permease	gnl\|CDD\|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	4.41249e-44
NZ_CP051516.1\|WP_168795620.1\|4497299_4497836_+\|class-IV-adenylate-cyclase	gnl\|CDD\|143628	cd07890, CYTH-like_AC_IV-like, Adenylyl cyclase (AC) class IV-like, a subgroup of the CYTH-like superfamily. This subgroup contains class IV ACs and similar proteins. AC catalyzes the conversion of ATP to 3',5'-cyclic AMP (cAMP) and PPi. cAMP is a key signaling molecule which conveys a variety of signals in different cell types. In prokaryotes, cAMP is a catabolite derepression signal which triggers the expression of metabolic pathways including the lactose operon. Six non-homologous classes of ACs have been identified (I-VI). Class IV ACs are found in this group. In bacteria, the gene encoding Class IV AC has been designated cyaB and the protein as AC2. AC-IV occurs in addition to AC-I in bacterial pathogens such as Yersinia pestis (plague disease). The role of AC-IV is unknown but it has been speculated that it may be a factor in pathogenesis, perhaps providing cAMP for a secondary internal signaling function, or for secretion and uptake into host cells, where it may disrupt normal cellular processes. This subgroup belongs to the CYTH/triphosphate tunnel metalloenzyme (TTM)-like superfamily, whose enzymes have a unique active site located within an eight-stranded beta barrel.	1.81235e-42

>NZ_CP051516.1|WP_168795614.1|4489315_4490530_-|ABC-transporter-substrate-binding-protein
MKKNPLARLATLCFAVAAGAALTMGSAQAADDAVKIGFITDMSGLYADIDGQGGLEAIRMAVADFGGKVNGKPVTVVYADHQNKADIAASRAREWFDRDGVDLLIGGTNSATGLSMNTVAGEKKKVYISIGAGADTLTNEQCTPYTIHYAYDTTALAKGTGSAVTKQGGKTWYFLTADYAFGKALEKNTSDVVKASGGQVLGAVRHPLSASDFSSFLLQAQASKAQILGLANAGGDTINSIKAAKEFGITKTMKLAALLMFIDDVHSLGLETTQGLVLTDSWYWNKDATTRKWAQRYFDKMKKMPSSLQAADYSATMTYLNAVKAVGSTDSDKVMAQLKKAKIDDFYAKGYIRQDGSMIHDMYLMQVKTPAESKEPWDYYKITATIPGEQAFTTKAETRCALWK
>NZ_CP051516.1|WP_168795613.1|4488244_4489129_-|branched-chain-amino-acid-ABC-transporter-permease
MEIFGVPLPAMLSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAMLAWMGFSYFGLPYWVMLVLAPLIVGLFGMAIERSMLRWLYKLDHLYGLLLTFGLTLVVEGVFRSIYGSSGQPYDVPSALSGATNLGFMFLPNYRAWVVVASLTVCFATWFVIEKTRLGAYLRAGTENPKLVEAFGINVPLMITLTYGFGVALAAFAGVLAAPVIQVSPLMGQPMIITVFAVVVIGGMGSIMGSILTGLLLGVIEGLTRVFYPEASATVVFVIMALVLLVRPAGLFGKEK
>NZ_CP051516.1|WP_168795612.1|4487273_4488245_-|branched-chain-amino-acid-ABC-transporter-permease
MQRKVLYGLLLIVLLAVPVLGIYPLFVMKVLCFALFAAAFNLLIGYTGLLSFGHAMFLASAGYVTGYAIQSLGFSPELGVLAGTAAATLLGLIVGLFAIRRQGIYFAMVTLALAQMVYFVFLQAPFTHGEDGLQGVPRGKLFGVLDLSSDVALYFVVLAVMVLAFLLIVRIVHSPFGQVLVAIKENEPRAVSLGYDTDRFKLLAFILSAGIAGLAGSLKVLVQGFETLSDAYWTMSGLVILMTLVGGMGTLFGPLLGAALIVALEDRLGDIGGALATTTGVEWFRSLGESVTIVTGVIFIACVLAFRRGIVGEIIARVRPLRA
>NZ_CP051516.1|WP_168795611.1|4485588_4486755_-|ABC-transporter-substrate-binding-protein
MKSALRWISAALVATGVSAAWSGHAFADVKIGVTVSATGPAASLGIPEKNTIALLPKEVAGQKIDYIVLDDATDSTQAVKNARKLTSEDHVDALIGSTVVPNSLAMIDVAAESTTPMISMAAAASIVEPMDAKRAWVFKTPQNDILMATAIAQHMSNHGVKTVAFIGFSDAYGENWFKEFGKAADLAKIKVVANERFARNDASVTGQVLKIMSQNPDAVLIAGAGTPAALPQKTLKERGYKGKYYQTHGVANNDFLRVCGKDCEGTYLPAGPLLVAEQLPDSNPVKKSSLAYKRAYETAYGAGSVSTFGGHAWDAGLLLQRAIPLALKKGQPGTPAFREALRAALESTKDMPASHGIFNMSANDHAGLDQRARVMVEIVGGKWKLSGD
>NZ_CP051516.1|WP_168789116.1|4484141_4485505_+|IS3-family-transposase
MAKYSEQLKLKLVKQYLAGVAGAGVIAQRYGVGPSVLRHWVATYEQHGRDGLRKKFSHYDAQFRMSVLTHMWRKDLSCRQVAVVFDIRNPSCVGKWERRYHEGGMDALAPRPRGRPKTMTHPTPEQPTGESAPDERTREQLLKENEYLRAEVAYPKKARCPASGEEAGRAKEKAQIVQELRQHHATLALLKAAGLARSTFYYQLKVMDGVDRHKDLKARIKTVYERHKGRYGYRRITLEIRKAGQLVNHKTVQCLMGKLNLKSLVRAKKYRSWRGEVGRIAPNLLNREFSASQPNQKWVTDVTEFNVLGQKLYLSPIMDLYNNEIVAYQMNTRPVFEMVNGMLRKALAKLGDEDRPLLHSDQGWQYQMRAYRRLLDQHGLTQSMSRRANCYDNAAMESFFGTLKSEFFLLNRFESIEALKAGIRQYIRYYNHKRITLKLNGLSPVMYRTQACRP
>NZ_CP051516.1|WP_168795610.1|4482605_4483766_-|ABC-transporter-substrate-binding-protein
MKKTKQWVRTGIAMALMCSAGAAFAQVKIGVTLSTTGPAASLGIPEKNTIALLPKEIGGKTVQYIILDDGSDTGKAVQNTRKLIDEDHVDAIIGSTVTPNSLAMLDAAAEGKTPVISLAASAAIISPMDAKRAWAFKPPQNDSLMADAIADYMEHHGVKTVGFIGFADAYGDGWNNVFTAAAAAHNLKIVSNERFNRTDASVTGQVLKTMGANPDAVLIAGAGTPSALPAKTLKERGYKGKVYQTHGVANNDFLRVCGKDCEGEFLPAGPILVADQLPDSNPVKKSSLAYKAAYEKAYGAGSVATFGGHAWDAGQMLQAAIPVALKTAQPGTEAFRVALRGALENIKELPVSHGIMNTTTTDHNGLDKRARVIVQIVDGKWKLQND
>NZ_CP051516.1|WP_168795609.1|4481344_4482400_-|branched-chain-amino-acid-ABC-transporter-permease
MDLSIAAILAQDGITTGAIYALLALALVLVFSVTRVIFIPQGEFVSYGALTLAALQTQKFPATCWLLMAMGAACFVVEIAGLVRHPERRRHAARTLVMLVGKYLLFPIAVYALTQGVFMHPLPMIAQIALTLLIVIPMGPYVYRLAYEPIAEATTLLLLIVAVAVHFAMVGLGLVMFGAEGSRTTAFSDATFNIDTLTISGQSLWVVGTAVVLIGALYLYFDRSISGKALRATSVNRLGARLVGIGTTQAGRLAFTLAAGLGALCGILVAPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSILVGLLESYSSFWASAYKEVIVFTLIIPVLLWRSLASPHAEEEEE
>NZ_CP051516.1|WP_168795608.1|4479555_4481340_-|branched-chain-amino-acid-ABC-transporter-ATP-binding-protein/permease
MKRIMQNKFFWLFLVVLFALPVLPQPIHVPEYWVTLLNYIGLYSIVAIGLVLLTGIGGMTSFGQAAFVGIGAYATAFLTTRYGVSPWLALIAGVVVTALIALMLGLVTMRLSGHFLPLGTIAWGLALFYLFGNLEMLGKYDGINGIPVLNVFGINLESGRHIYYLIWVVVLGAVISVQNLLNSRPGRAIRALRGGGMMAEAMGVNTGWMRVVIFVYAAVLASVSGFLYAHLQRAVNPTPFGLNHGIEFLFMAVVGGVSHVWGAVLGAAILTVLQDYLQTLLPKLLGENGNFEVIVFGILMVLLLQYARQGVWPFVARFFPKGPRAHLADHAEPLPQRSKPAAGEDLLTVNKARKQFGGLVAVNDVSFEVKAGQIIGLIGPNGAGKSTTFNLVTGVLQATSGEISFRGERIDSLSSREIVKRGIGRTFQHVKLLPGMTVLENVAIGAHLRGQAGVWRSVVRLNSVEEARLMAEAARQIRRVGLEQHMYDEAGSLALGQQRILEIARALCCDPTLLLLDEPAAGLRYQEKLQLADLLRRLKAEGMSVLLVEHDMDFVMNLTDRLVVMEFGTRIAEGLPQDVQQDPAVLEAYLGGVE
>NZ_CP051516.1|WP_132376528.1|4478791_4479556_-|ABC-transporter-ATP-binding-protein
MENTMNAAGPILDVDGLSVRYGKVEALHGAAIKVRPGQIVSVIGPNGAGKSTLLNAIMGALPTTGHAKGAVLYQGEDVSAVPVEKRVARGMCLVPEKRELFASMTVEDNLVLGAYRRKRAGERNFLDQLEPVFTLFPRLKERRKQAAGTLSGGERQMLAVGRALMGKPDLLMLDEPSLGLAPLIVKEIFHIISALRQTGVATLLIEQNARAALQISDYGYVLETGELALEGPAADLAQNPRVIETYLGLAKKVA
>NZ_CP051516.1|WP_168795607.1|4476657_4478616_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MLFPSEFDVIVVGGGHAGTEAALASARMGNTTLLLTHNIETLGQMSCNPSIGGIGKGHLVKEVDALGGAMAAATDEGGIQFRILNSSKGPAVRATRAQADRLLYKQAIRHRLENQPNLWLFQQAVDDLMVEGDRVVGAVTQVGIRFRARAVVLTAGTFLDGKIHVGLNNYTGGRAGDPAAISLSARLKELKLPQGRLKTGTPPRIDGRTIDFSQLEEQPGDLDPVPVFSFLGRVEQHPRQVPCWVTHTNERTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFASKESHQIFLEPEGLTTNEFYPNGISTSLPFDVQLELVRSMRGLEHAHILRPGYAIEYDYFDPRGLKASLETKVINGLFFAGQINGTTGYEEAAAQGLLAGINAGLFVQGKEAWCPRRDQAYLGVLVDDLVTRGVSEPYRMFTSRAEYRLSLREDNADMRLTEVGRELGVVDDVRWDAFSRKRDAVSRETERLRTTWVNPKTLSADEATALLGKPIDHEYSLADLLRRPGVSYDGVCGLRAGACAAPETLAEDDVLLAQLKEQIEIGIKYQGYIDRQAGEIERNEAHESTRLPEGLDYAEVRGLSFEARQKLTQFRPETIGQASRISGITPAAISLLMVHLKRGLGRRPTKPVEPGTDSTPVTQ
>NZ_CP051516.1|WP_168795617.1|4492499_4494212_-|choline-dehydrogenase
MSYTDTTPAARRLEGEFDYIIVGAGTAGCVLANRLSQDPDVQVLLLEAGGKDDYHWIHVPVGYLYCIGNPRTDWLYKTQAEAGLNGRSLSYPRGRVLGGSSSINGMIYMRGQREDYDEWARVTNDPSWSWNSVLPVFKRSEDHHAGATESHGAGGPWRVEKQRLKWKILEEFSRAAQEAGIPATDDFNRGDNTGVGYFDVNQKRGIRWNASKAFLRPALKRPNLTVITGAHTQRVVFEGRRCSGVEYRGDNTDYLAKARCEVILSSGAVNSPQLLELSGIGNGGRLQNLGIEVVNDLRGVGENLQDHLQLRMAYKVDGVRTLNTASAHWWGKLLIGMQYAFFQSGPMSMSPSQLGAFAKSDPNDRSLTRPDLQYHVQPLSLDRFGEPLHRFNAFTASVCQLRPTSRGSIHIESADASAPPLIAPNYLSTDYDRRVAANALRLTRRIAAAPALARYRPQEILPGIQYQTEEELQQAAGAVGTTIFHPVGTCRMGTTDDAGAVVDNRLRVIGVDGLRVVDASVMPTITSGNTNSPTLMIAERASDMIREDRRARVGGSFAAQTRSASSMSAV
>NZ_CP051516.1|WP_168795618.1|4494372_4495911_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MSETYQDQTQRSATSARALTHFINGKTLEGTSGRFGDVFNPAQGSVSARVPLASVAEVDAAVAAAKAAFPAWSETAPIKRARVLFKFKELLDRHHDELAELITREHGKVFSDAKGEVMRGIEIVEFACGIPNLLKSDFTDQIGGGIDNWNLRQPLGVVAGITPFNFPMMVPSWMFPVAIACGNTFVLKPSERDPSCSNRLAELLKEAGLPDGVFNVVHGDKVAVDALLVHPEVSALSFVGSTPIAEYIYTEGTKHGKRVQALGGAKNHLVVMPDADLDQAVDALIGAAYGSAGERCMAISVAVAVGHIADELIERLIPRVKSLKILNGMESDAEMGPLVTSVHREKVVGYIDSGVEAGAKLVVDGRGHQVSGHEKGFFLGGTLFDNVSTDMKIYREEIFGPVLCVVRVPDFASAVELINANEFANGVSLFTSDGGVARAFSRQIQIGMVGINVPIPVPMAWHSFGGWKKSLFGDHHAYGEEGVRFYTRYKSIMQRWPDSIAKGAEFTMPVAK
>NZ_CP051516.1|WP_168795619.1|4496054_4496954_+|LysR-family-transcriptional-regulator
MDLTLLRAFVTVAREGNLTRAAVQLHLTQPAVSLQIKHLQETLGVTLFTRTSHGLSLTRDGQALLPHAERALGAANDVQRAAQSLRHEVRGRLRIGTILDPAFLRLGGFLKQLVETWPRIETALRHGMSGWVLDQVRAGELDVGYYIGLPSEDEPRDGPAFHALTLTHFQYRVLAPAGWKDRVKGARDWRSLAALPWIWTPPASAHNRLLTRCFDEAGVKPVKVAEVDQEPSMLDLVKSGVGLTLARDATAIAEAHAHALTIVEGVTVPTQLSFITLAQRKEEPAIAAALKLIEQQWAT
>NZ_CP051516.1|WP_168795620.1|4497299_4497836_+|class-IV-adenylate-cyclase
MARNIEIKARAQHFEQLRERAAQLAPDAPLIFRQQDFFYDVPRGRLKLRQFDDGTPAELIFYQRDDRDGPKASYYTRSPVTNPEAMHALLATALTTRGIVTKERHVYLTGRTRIHLDRVDGLGDFVELEVLLAQDDDEEGGHAEAHAMFTTLGVPESDLVAVAYVDLLSPDSEPKQAA
>NZ_CP051516.1|WP_115781433.1|4497903_4498395_-|Lrp/AsnC-family-transcriptional-regulator
MLELDHFDLALLDVLQRFGRATHQQLAEQVPLSPSQIGRRLQRLEQVGVVDGYRVVLRPEKLGLGVTAFTSLKLKHHGDSIIEQFQQQIEVLPEVLECHAVVGDADYLLRIVAPDLNYLSTFVMKKLMRVPGVDSVRSNIVLTTFKRNGPLPLGHLSPGTAAA
>NZ_CP051516.1|WP_168795621.1|4498464_4499433_+|phenylalanine-4-monooxygenase
MRPFRTDAALHLHHRYTPAITVERSIMPTANTAKLKEQFDAGLETRADFTIDQPTERYGAVDHAVWQQLYARQTALLKGRVCDEFLAGVDTIGMPADRVPSFDEINAKLTPATGWQIVAVPGLVPDQVFFEHLANRRFPVTWWMRRPDQIDYLQEPDCFHDLFGHVPLLINPVFADYMHAYGRAALAAHDAGALPLLARLYWYTVEFGLIRDAASPNGVKIYGAGIVSSKGETLYSQQSAAPNRLGFDLERVMRTRYRIDTFQKTYFVIDDFAQLFNVAQTDFAPLLARLAAEPAVAAGDVLEHDRVITRGSQEGWLADGDI
>NZ_CP051516.1|WP_168795622.1|4499537_4499828_+|4a-hydroxytetrahydrobiopterin-dehydratase
MIHKLTSEERATQLAGLHGWQATAGRDAIQRQFKFADFNEAFGFMTRVAIKAQEMDHHPEWFNVYNKVEITLSTHDAGGLTERDIKLATFIDSITA
>NZ_CP051516.1|WP_012434827.1|4499933_4500158_-|DUF3717-domain-containing-protein
MSEISIHELEAAINFWRARSPSSGDELVLCKEASALSKPYALMIVQRQHTLSPDRLDGIARQAWDSYVHLKNSL
>NZ_CP051516.1|WP_007180058.1|4500386_4501073_+|response-regulator-transcription-factor
MRLLLIEDDRPIARGIQSSLEQAGFTVDMVHDGIFAEQALTQNRHELVILDLGLPGIDGMTLLSRFRQSNRHTPVIILTARDELNDRVQGLNSGADDYMLKPFEPTELEARIRAVMRRSGPHGDMPRPEVSLGGVRLSGVDRRIFNDDKPLELSPREFAVLEMLLLRHGRVVSKAQLQDHLTHFGGDLGDTAIEVYVHRVRKKLESCRVEIVTVRGFGYLLQEIRQAA
>NZ_CP051516.1|WP_168795623.1|4501207_4502713_+|histidine-kinase
MPQPAANSLRRTLLRRLAAPLSLLALMSGLIAYWLAWQYTQHVVDRSLADLATAISKQIQIAGPDARITVPPLAQAMFSDPVEHLVYRISTGETEIAGDQNLPLQGTSVRRMHYAYVFETEHQGVTVRVAQVRVDQPTGNPIVVEVGQPVHHRFRIAAEFLVAIMMPLLLLLLAGWVIVWRVVNQQLNPLTDLADSLNRQTHTSLEPVDETYVPVEIRPLTGALNALLGRLKTALDGQRKFIADAAHQLRTPLTAVKLHAEQAAVARDPQQTLAAVRELRAAADRAVRLSNQLLSLARAEPGEQAARFVNVDMAALAFDTGAEWVPRALTFHVDLGFQRLDDPSNGHPLMARGNPVLLHEVLANLLDNALKYVPPSRFDGGRITVTVSQTVIDELRMAEIVVEDNGPGVPRNQQADLFKRFFRGDGQTDAGVDGGAGLGLAIVHDIMVLHHGSVHYEDAPEGGARFIVRIPLVPITVQSDVETLEPRRPAKKSAYSAPVDF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP051516_1	1.2\|1988738\|22\|NZ_CP051516\|CRISPRCasFinder	1988738-1988759	22	NZ_CP051516.1	1988768-1988789	0	1.0

1. spacer 1.2|1988738|22|NZ_CP051516|CRISPRCasFinder matches to position: 1988768-1988789, mismatch: 0, identity: 1.0

gccgtaacgaaaaccgccgtaa	CRISPR spacer
gccgtaacgaaaaccgccgtaa	Protospacer
**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

148402 : 155929

Streptococcus_phage(33.33%)

integrase

attL 138117:138131|attR 160062:160076

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
138117:138131	attL	NA	NA	NA	NA
WP_168792291.1\|148402_149032_-	exonuclease	A0A2L0UZL4	Agrobacterium_phage	2.8e-35	39.4
WP_168792292.1\|149028_149673_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	2.0e-20	31.2
WP_168792293.1\|150280_150913_+	septal ring lytic transglycosylase RlpA family protein	F5B3X9	Synechococcus_phage	3.8e-19	58.3
WP_168792294.1\|151040_151919_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	3.6e-36	39.6
WP_168795688.1\|151998_152421_+	YraN family protein	NA	NA	NA	NA
WP_168792295.1\|152636_153224_+	phosphoheptose isomerase	A0A067XQR2	Caulobacter_phage	6.1e-16	34.8
WP_168792296.1\|153250_154048_+	BON domain-containing protein	NA	NA	NA	NA
WP_168792297.1\|154044_154395_+	c-type cytochrome	NA	NA	NA	NA
WP_168792298.1\|154711_155929_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	9.5e-120	55.6
160062:160076	attR	NA	NA	NA	NA

DBSCAN-SWA_2

567950 : 577302

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168792630.1\|567950_569903_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.5e-146	48.8
WP_168792631.1\|570169_571309_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	6.3e-25	35.5
WP_168792632.1\|571334_573251_+	aminodeoxychorismate synthase component I	S4VT78	Pandoravirus	8.1e-49	35.1
WP_168792633.1\|573589_574405_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	3.1e-34	29.6
WP_168792634.1\|574444_575125_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	3.3e-05	28.1
WP_168792635.1\|575121_575670_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_168792636.1\|575718_577302_-	polynucleotide adenylyltransferase PcnB	A0A172Q0J1	Acinetobacter_phage	2.6e-16	30.6

DBSCAN-SWA_3

1088421 : 1107911

uncultured_Caudovirales_phage(22.22%)

terminase,tail,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168793014.1\|1088421_1091121_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	2.6e-93	44.0
WP_168793015.1\|1091359_1092142_+	hypothetical protein	NA	NA	NA	NA
WP_168793016.1\|1092393_1093149_+	hypothetical protein	A0A291AUT0	Sinorhizobium_phage	9.7e-22	35.0
WP_168793017.1\|1093363_1094011_+	hypothetical protein	NA	NA	NA	NA
WP_168793018.1\|1093958_1096031_+\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	1.0e-97	35.9
WP_168795729.1\|1096033_1096237_+	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	5.8e-06	44.3
WP_168793019.1\|1096238_1097708_+\|portal	phage portal protein	B7SYD6	Stenotrophomonas_phage	4.0e-80	38.0
WP_168793020.1\|1097778_1099842_+	peptidase U35	A0A076G7Y9	Pseudoalteromonas_phage	5.6e-64	32.9
WP_168793021.1\|1099907_1100237_+	DUF2190 family protein	NA	NA	NA	NA
WP_168793022.1\|1100233_1100545_+	hypothetical protein	NA	NA	NA	NA
WP_168793023.1\|1100541_1100973_+	hypothetical protein	NA	NA	NA	NA
WP_168793024.1\|1101029_1101959_+	hypothetical protein	G8EY04	Synechococcus_phage	1.3e-49	38.8
WP_168793025.1\|1102038_1102368_+	hypothetical protein	NA	NA	NA	NA
WP_168793026.1\|1102469_1102757_+	DUF1799 domain-containing protein	A0A0S2SY90	Pseudomonas_phage	6.3e-06	36.0
WP_168793027.1\|1102790_1107911_+\|tail	phage tail tape measure protein	L7P7M2	Pseudomonas_phage	9.1e-31	29.5

DBSCAN-SWA_4

1808488 : 1851532

Burkholderia_virus(22.22%)

terminase,plate,portal,tail,head,capsid,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168793553.1\|1808488_1809490_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_168793554.1\|1809747_1810566_+	hypothetical protein	NA	NA	NA	NA
WP_168793555.1\|1810610_1811738_-	hypothetical protein	NA	NA	NA	NA
WP_168793556.1\|1811796_1812024_-	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_168793557.1\|1812685_1812946_+	hypothetical protein	NA	NA	NA	NA
WP_168793558.1\|1812960_1813914_-	phage Gp37/Gp68 family protein	Q8W6R4	Burkholderia_virus	8.5e-108	60.0
WP_168793559.1\|1813946_1814540_+	hypothetical protein	Q8W6Q5	Burkholderia_virus	1.3e-08	36.8
WP_168793560.1\|1814576_1815290_+	hypothetical protein	NA	NA	NA	NA
WP_168793561.1\|1815315_1815663_-	DUF4031 domain-containing protein	A0A291LA06	Bordetella_phage	4.0e-39	77.9
WP_168793562.1\|1815661_1816393_+	hypothetical protein	NA	NA	NA	NA
WP_168792180.1\|1816524_1816845_-	hypothetical protein	NA	NA	NA	NA
WP_168793563.1\|1816987_1818937_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_168793564.1\|1818954_1819383_-	hypothetical protein	NA	NA	NA	NA
WP_168792181.1\|1819628_1820186_-	hypothetical protein	NA	NA	NA	NA
WP_168793565.1\|1820359_1821097_-	hypothetical protein	NA	NA	NA	NA
WP_168793566.1\|1821101_1821371_-	hypothetical protein	NA	NA	NA	NA
WP_168793567.1\|1821379_1821580_-	hypothetical protein	NA	NA	NA	NA
WP_168793568.1\|1821678_1821930_+	hypothetical protein	NA	NA	NA	NA
WP_168793569.1\|1822447_1823056_-	hypothetical protein	NA	NA	NA	NA
WP_168793570.1\|1823131_1823398_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	1.8e-07	48.4
WP_168793571.1\|1823489_1823669_-	hypothetical protein	NA	NA	NA	NA
WP_168793572.1\|1823730_1824015_-	hypothetical protein	NA	NA	NA	NA
WP_168793573.1\|1824205_1824607_+	hypothetical protein	NA	NA	NA	NA
WP_168793574.1\|1824603_1824792_+	hypothetical protein	NA	NA	NA	NA
WP_168793575.1\|1824803_1824959_+	hypothetical protein	NA	NA	NA	NA
WP_168793576.1\|1824960_1825239_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168793577.1\|1825273_1825804_+	hypothetical protein	NA	NA	NA	NA
WP_168793578.1\|1825800_1826991_+	hypothetical protein	C5IHL2	Burkholderia_virus	1.8e-30	59.4
WP_168793579.1\|1826987_1827212_+	hypothetical protein	NA	NA	NA	NA
WP_168795764.1\|1827454_1827796_+	DUF1064 domain-containing protein	H2DE79	Erwinia_phage	1.0e-26	59.6
WP_168793580.1\|1827822_1828059_+	hypothetical protein	NA	NA	NA	NA
WP_168793581.1\|1828071_1828419_+	hypothetical protein	NA	NA	NA	NA
WP_168795765.1\|1828577_1828877_+	hypothetical protein	Q3HR02	Burkholderia_phage	7.9e-20	49.4
WP_168793582.1\|1828869_1829484_+	hypothetical protein	NA	NA	NA	NA
WP_168793583.1\|1829664_1830285_+	DNA-binding protein	Q3HR05	Burkholderia_phage	1.3e-32	42.3
WP_168793584.1\|1830366_1831563_+	DUF4935 domain-containing protein	NA	NA	NA	NA
WP_168793585.1\|1831740_1832058_-	hypothetical protein	NA	NA	NA	NA
WP_168793586.1\|1832307_1832562_+	hypothetical protein	NA	NA	NA	NA
WP_168793587.1\|1832546_1833224_+	hypothetical protein	NA	NA	NA	NA
WP_168793588.1\|1833371_1834082_+	hypothetical protein	NA	NA	NA	NA
WP_168793589.1\|1834074_1836168_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	2.6e-85	31.9
WP_168793590.1\|1836173_1836443_+\|head,tail	phage head-tail adapter protein	NA	NA	NA	NA
WP_168793591.1\|1836442_1838095_+\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	5.3e-73	32.9
WP_168793592.1\|1838091_1838976_+	S49 family peptidase	A0A1I9KF73	Aeromonas_phage	9.5e-53	39.7
WP_168793593.1\|1839344_1839650_+	hypothetical protein	NA	NA	NA	NA
WP_168793594.1\|1839691_1840348_+\|head	head decoration protein	NA	NA	NA	NA
WP_168793595.1\|1840418_1841456_+\|capsid	major capsid protein	A0A0A8ILA9	Aurantimonas_phage	4.4e-65	41.2
WP_168793596.1\|1841457_1841775_+	hypothetical protein	NA	NA	NA	NA
WP_168793597.1\|1841771_1842326_+	hypothetical protein	NA	NA	NA	NA
WP_168793598.1\|1842336_1842603_+	DUF2635 domain-containing protein	NA	NA	NA	NA
WP_168793599.1\|1842603_1844118_+\|tail	phage tail protein	B5TK67	Pseudomonas_phage	4.8e-105	47.4
WP_168793600.1\|1844182_1844566_+\|tail	phage tail protein	NA	NA	NA	NA
WP_168793601.1\|1844569_1844875_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_168793602.1\|1844981_1846814_+	hypothetical protein	Q6UIY6	Burkholderia_virus	2.4e-05	32.1
WP_168793603.1\|1846810_1848247_+	DNA circulation family protein	A0A2P9JZK2	Alteromonadaceae_phage	1.9e-10	24.8
WP_168793604.1\|1848250_1849321_+	hypothetical protein	B5TK72	Pseudomonas_phage	1.4e-42	32.7
WP_168793605.1\|1849317_1849917_+\|plate	phage baseplate assembly protein	NA	NA	NA	NA
WP_168793606.1\|1849913_1850369_+	hypothetical protein	A0A0C4UR04	Shigella_phage	2.9e-21	43.7
WP_168793607.1\|1850368_1851532_+\|plate	baseplate J/gp47 family protein	A0A192Y6E4	Salmonella_phage	6.0e-23	30.5

DBSCAN-SWA_5

3691644 : 3705637

Salmonella_phage(12.5%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168795020.1\|3691644_3692091_+	dUTP diphosphatase	S4TNT3	Salmonella_phage	1.6e-45	63.3
WP_168795021.1\|3692490_3695001_+	hypothetical protein	NA	NA	NA	NA
WP_168795022.1\|3695067_3697365_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	4.2e-169	41.6
WP_012434130.1\|3697361_3697676_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	7.6e-13	44.6
WP_007180614.1\|3698228_3698435_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	2.4e-23	81.8
WP_168795023.1\|3698632_3699448_-	hypothetical protein	Q98453	Paramecium_bursaria_Chlorella_virus	8.2e-35	34.8
WP_168795024.1\|3699752_3701009_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.4e-12	66.7
WP_168795025.1\|3701342_3701912_+	pseudouridine synthase	NA	NA	NA	NA
WP_011489640.1\|3702367_3702562_+	hypothetical protein	NA	NA	NA	NA
WP_168795026.1\|3702707_3703214_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	2.5e-13	40.2
WP_168795027.1\|3703531_3705637_+	elongation factor G	E4ZFJ7	Streptococcus_phage	1.0e-60	26.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP051514

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

91911 : 231243

105

Pseudomonas_phage(12.5%)

integrase,transposase

attL 90475:90491|attR 233578:233593

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
90475:90491	attL	NA	NA	NA	NA
WP_168787402.1\|91911_92352_+\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	6.2e-21	49.5
90475:90491	attL	NA	NA	NA	NA
WP_168787403.1\|92306_92759_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A1B0Z042	Pseudomonas_phage	4.7e-56	70.5
WP_168787404.1\|93413_93842_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.9e-44	61.2
93600:93616	attR	NA	NA	NA	NA
WP_168787405.1\|93911_94211_+	hypothetical protein	NA	NA	NA	NA
93600:93616	attR	NA	NA	NA	NA
WP_168787406.1\|94188_95750_-\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.9e-10	32.7
WP_168787407.1\|95848_96646_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	6.6e-21	30.0
WP_168787408.1\|97197_98604_-	amino acid permease	NA	NA	NA	NA
WP_168787409.1\|99567_100281_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.8e-09	27.5
WP_168787410.1\|101115_102414_-	lactonase family protein	NA	NA	NA	NA
WP_168787411.1\|103138_103687_+	hypothetical protein	NA	NA	NA	NA
WP_168787412.1\|103698_105300_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_168788926.1\|105330_106734_+	c-type cytochrome	NA	NA	NA	NA
WP_168787413.1\|106846_108019_+	porin	NA	NA	NA	NA
WP_168787414.1\|108897_110121_+	glycosyltransferase	NA	NA	NA	NA
WP_168787415.1\|110205_111627_+	hopanoid biosynthesis associated radical SAM protein HpnJ	NA	NA	NA	NA
WP_168787416.1\|111626_112487_+	hopanoid biosynthesis-associated protein HpnK	NA	NA	NA	NA
WP_168787417.1\|112483_113488_+	hypothetical protein	NA	NA	NA	NA
WP_168787418.1\|113853_116253_+	penicillin-binding protein 1A	NA	NA	NA	NA
WP_168787419.1\|117889_118387_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168787420.1\|118557_120030_+	MFS transporter	NA	NA	NA	NA
WP_168788927.1\|120245_121514_+	amidohydrolase	NA	NA	NA	NA
WP_168787421.1\|121510_122170_+	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_168787422.1\|122211_122547_-	hypothetical protein	NA	NA	NA	NA
WP_168787423.1\|123702_124482_+	acetoacetate decarboxylase	NA	NA	NA	NA
WP_168787424.1\|124509_125292_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA
WP_168787425.1\|125303_126653_+	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_168788928.1\|126960_127212_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_168787307.1\|127573_128020_-	hypothetical protein	NA	NA	NA	NA
WP_168788929.1\|128576_129425_+	VacJ family lipoprotein	NA	NA	NA	NA
WP_168787426.1\|129887_130556_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168787427.1\|130915_132130_-	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_168788930.1\|132419_133610_-	porin	NA	NA	NA	NA
WP_168787428.1\|133694_134993_-	lactonase family protein	NA	NA	NA	NA
WP_168787429.1\|135083_136412_-	cytochrome c	NA	NA	NA	NA
WP_168787430.1\|136421_138200_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_168787431.1\|138199_138940_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_168787432.1\|139050_139515_-	DUF3331 domain-containing protein	NA	NA	NA	NA
WP_168787433.1\|140333_141770_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_168787434.1\|141772_142780_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_168788931.1\|142801_142954_+	DUF2474 domain-containing protein	NA	NA	NA	NA
WP_168787435.1\|143120_143501_+	BON domain-containing protein	NA	NA	NA	NA
WP_168788932.1\|144731_145226_+	hypothetical protein	NA	NA	NA	NA
WP_168787436.1\|145236_146841_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_168788933.1\|146933_148289_+	c-type cytochrome	NA	NA	NA	NA
WP_168787437.1\|148355_149531_+	porin	NA	NA	NA	NA
WP_168787438.1\|149675_150128_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168787439.1\|150134_152186_+	FUSC family protein	NA	NA	NA	NA
WP_168787440.1\|152208_152418_+	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_168787441.1\|152414_153308_+	HlyD family secretion protein	NA	NA	NA	NA
WP_168787442.1\|153304_154777_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_168787443.1\|155550_156636_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168787444.1\|156641_156884_+	hypothetical protein	NA	NA	NA	NA
WP_168787370.1\|157177_158383_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	3.0e-118	53.0
WP_168788925.1\|158406_158823_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.0e-53	69.9
WP_168787445.1\|159015_159981_-	c-type cytochrome	NA	NA	NA	NA
WP_168787446.1\|160618_161809_-	c-type cytochrome biogenesis protein CcsB	NA	NA	NA	NA
WP_168787447.1\|162368_162914_-	cupin domain-containing protein	NA	NA	NA	NA
WP_168787448.1\|162918_163098_-	hypothetical protein	NA	NA	NA	NA
WP_168787449.1\|163326_164961_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_168787450.1\|164982_165513_-	sorbitol dehydrogenase	NA	NA	NA	NA
WP_168787451.1\|165525_167112_-	c-type cytochrome	NA	NA	NA	NA
WP_168787452.1\|167214_167427_+	hypothetical protein	NA	NA	NA	NA
WP_168788934.1\|167777_168971_-	porin	NA	NA	NA	NA
WP_168787453.1\|169806_170526_+	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_168787454.1\|170562_172332_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_168787455.1\|172337_173615_+	cytochrome c	NA	NA	NA	NA
WP_168787456.1\|174366_174981_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_168787457.1\|176583_176877_+	hypothetical protein	NA	NA	NA	NA
WP_168787458.1\|176886_177618_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.6e-16	32.0
WP_168787459.1\|177770_178052_-	hypothetical protein	NA	NA	NA	NA
WP_168787460.1\|178184_178589_+	hypothetical protein	NA	NA	NA	NA
WP_168787461.1\|180060_180921_-	HlyD family secretion protein	NA	NA	NA	NA
WP_063496755.1\|180934_181135_-	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_168787462.1\|181124_183335_-	FUSC family protein	NA	NA	NA	NA
WP_168787463.1\|183346_184999_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_168787464.1\|185155_186121_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787465.1\|188156_189242_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168787466.1\|189642_190767_-	porin	NA	NA	NA	NA
WP_168787467.1\|191232_192258_+	phosphate ABC transporter substrate-binding protein PstS	A0A1D7SRJ6	Cyanophage	2.1e-48	38.6
WP_168787468.1\|192401_192668_-	hypothetical protein	NA	NA	NA	NA
WP_168787469.1\|193083_194202_+\|transposase	transposase	A0A0H3UZC2	Geobacillus_virus	4.4e-23	35.5
WP_168787386.1\|194335_195367_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787470.1\|195735_196005_+	hypothetical protein	NA	NA	NA	NA
WP_168788935.1\|196260_197157_+	polyphosphate kinase 2	NA	NA	NA	NA
WP_168787471.1\|197564_198941_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_168787472.1\|199911_200931_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787473.1\|202648_204370_-	penicillin-binding protein 2	NA	NA	NA	NA
WP_168787474.1\|205751_206909_+	porin	NA	NA	NA	NA
WP_168787475.1\|208144_208651_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_168787476.1\|208708_209569_-	HlyD family secretion protein	NA	NA	NA	NA
WP_168787477.1\|209582_209783_-	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_168787478.1\|209772_211980_-	FUSC family protein	NA	NA	NA	NA
WP_168787479.1\|211993_213523_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_168787480.1\|213713_214658_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787481.1\|215357_217445_-	FUSC family protein	NA	NA	NA	NA
WP_168787482.1\|218580_218886_+	H-NS histone family protein	NA	NA	NA	NA
WP_168787483.1\|218926_219127_-	hypothetical protein	NA	NA	NA	NA
WP_168787484.1\|219210_219489_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	3.1e-18	57.3
WP_168787485.1\|219710_220724_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787486.1\|221102_222347_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.3e-07	27.7
WP_168787487.1\|222343_223279_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787488.1\|225004_225958_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787489.1\|226270_227224_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	4.8e-119	67.0
WP_168787490.1\|228003_229257_-\|integrase	tyrosine-type recombinase/integrase	D6PIF1	uncultured_phage	9.4e-06	26.0
WP_168787491.1\|230220_231243_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-38	34.0
233578:233593	attR	NA	NA	NA	NA

DBSCAN-SWA_2

254247 : 304785

Helicobacter_phage(28.57%)

integrase,transposase

attL 255498:255513|attR 269026:269041

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787507.1\|254247_254676_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	5.1e-44	61.2
WP_168788940.1\|254721_255816_+\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	2.0e-20	30.5
255498:255513	attL	NA	NA	NA	NA
WP_168787508.1\|256766_258755_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	7.4e-37	36.8
WP_168787370.1\|259117_260323_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	3.0e-118	53.0
WP_168788925.1\|260346_260763_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.0e-53	69.9
WP_168787509.1\|261388_261661_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_168787510.1\|261737_262916_-\|integrase	tyrosine-type recombinase/integrase	A0A166YH27	Gordonia_phage	2.3e-06	29.2
WP_168787308.1\|263962_264103_-	hypothetical protein	NA	NA	NA	NA
WP_168787309.1\|264302_264446_-	hypothetical protein	NA	NA	NA	NA
WP_168788941.1\|264581_265142_-	AMP-binding protein	NA	NA	NA	NA
WP_168787511.1\|265138_266236_-	dimethyl sulfone monooxygenase SfnG	NA	NA	NA	NA
WP_168787512.1\|266264_266846_-	FMN reductase	NA	NA	NA	NA
WP_168787513.1\|267148_268351_-	monooxygenase	NA	NA	NA	NA
WP_168787514.1\|268347_269508_-	FMNH2-dependent alkanesulfonate monooxygenase	NA	NA	NA	NA
269026:269041	attR	NA	NA	NA	NA
WP_168788942.1\|269901_271101_+	monooxygenase	NA	NA	NA	NA
WP_168787515.1\|271097_272213_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_168787516.1\|272573_272822_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_168787310.1\|272948_273278_-	hypothetical protein	NA	NA	NA	NA
WP_168787517.1\|273444_274713_-	amidohydrolase	NA	NA	NA	NA
WP_168787518.1\|274807_276271_-	MFS transporter	NA	NA	NA	NA
WP_168787311.1\|276405_276591_-	hypothetical protein	NA	NA	NA	NA
WP_168787519.1\|276753_277242_+	tannase/feruloyl esterase family alpha/beta hydrolase	NA	NA	NA	NA
WP_168787520.1\|277471_278023_-	hypothetical protein	NA	NA	NA	NA
WP_168787521.1\|278058_279444_-	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA
WP_168787522.1\|279672_281550_-	3-hydroxybenzoate 4-monooxygenase	NA	NA	NA	NA
WP_168787523.1\|282396_283574_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-43	52.4
WP_168787524.1\|283944_284733_-	MipA/OmpV family protein	NA	NA	NA	NA
WP_168787525.1\|284729_285611_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_168787526.1\|285613_286411_-	DUF4118 domain-containing protein	NA	NA	NA	NA
WP_168787527.1\|286629_287436_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_168788943.1\|287963_289514_+	phospholipase D family protein	NA	NA	NA	NA
WP_168787528.1\|289944_290139_+	hypothetical protein	NA	NA	NA	NA
WP_168787529.1\|290937_292005_+	lipase	NA	NA	NA	NA
WP_168787530.1\|292392_292743_-	hypothetical protein	NA	NA	NA	NA
WP_168787531.1\|293446_293911_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_168787532.1\|294415_294715_-	hypothetical protein	NA	NA	NA	NA
WP_168787533.1\|294727_295810_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168787312.1\|296315_296561_+	hypothetical protein	NA	NA	NA	NA
WP_168787534.1\|296503_296641_+	hypothetical protein	NA	NA	NA	NA
WP_168787535.1\|296752_296971_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_168787536.1\|296964_297330_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_168787537.1\|299068_300202_+	aminomethyl transferase family protein	NA	NA	NA	NA
WP_168788944.1\|300266_300797_+	glycine cleavage system protein R	NA	NA	NA	NA
WP_168787538.1\|300932_302570_+	APC family permease	NA	NA	NA	NA
WP_168787539.1\|302974_303517_-	hypothetical protein	NA	NA	NA	NA
WP_168787386.1\|303753_304785_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

323282 : 391751

Wolbachia_phage(25.0%)

integrase,transposase

attL 367254:367313|attR 391741:392844

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787387.1\|323282_324665_+\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	3.3e-76	35.8
WP_168787555.1\|326343_327810_-	ATP-binding domain-containing protein	A0A126DN25	Acinetobacter_phage	1.2e-60	32.3
WP_168787556.1\|328213_329263_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787557.1\|330877_332011_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787558.1\|333779_334292_-	hypothetical protein	NA	NA	NA	NA
WP_168787559.1\|334612_334828_-	hypothetical protein	NA	NA	NA	NA
WP_168787560.1\|335124_337185_+	poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA	NA	NA	NA
WP_168787561.1\|337191_339234_+	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA
WP_168787562.1\|339279_340620_+	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA
WP_168787563.1\|340635_341085_+	hypothetical protein	NA	NA	NA	NA
WP_168787564.1\|341135_342965_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	3.6e-131	43.8
WP_168787565.1\|342973_344203_+	hypothetical protein	NA	NA	NA	NA
WP_168787566.1\|344301_345663_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	6.6e-29	32.5
WP_168787386.1\|345886_346918_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787567.1\|350742_351315_-	phasin family protein	NA	NA	NA	NA
WP_168787568.1\|352624_352897_-	hypothetical protein	NA	NA	NA	NA
WP_168787313.1\|352940_353480_+	hypothetical protein	NA	NA	NA	NA
WP_168787569.1\|353857_354598_+	3-ketoacyl-ACP reductase	NA	NA	NA	NA
WP_168787570.1\|354625_355006_+	hypothetical protein	NA	NA	NA	NA
WP_168787571.1\|355393_355918_-	phasin family protein	NA	NA	NA	NA
WP_168787572.1\|358898_359936_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168787573.1\|360194_360380_+	hypothetical protein	NA	NA	NA	NA
WP_168787574.1\|360635_360941_+	hypothetical protein	NA	NA	NA	NA
WP_168787575.1\|361310_362240_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_168787576.1\|362577_362721_+	hypothetical protein	NA	NA	NA	NA
WP_168787387.1\|363120_364503_-\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	3.3e-76	35.8
WP_168787577.1\|364705_365920_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	4.9e-116	53.2
WP_168788947.1\|366122_366341_+	hypothetical protein	NA	NA	NA	NA
367254:367313	attL	NA	NA	NA	NA
WP_168787491.1\|367302_368325_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-38	34.0
WP_168787578.1\|368440_369016_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_168787579.1\|369049_370282_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787580.1\|370448_371675_+	EAL domain-containing protein	NA	NA	NA	NA
WP_168787581.1\|374313_376611_+	TonB-dependent receptor	NA	NA	NA	NA
WP_168787582.1\|376911_377943_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787583.1\|379159_379507_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787584.1\|379600_380155_+	hypothetical protein	NA	NA	NA	NA
WP_168787585.1\|380597_381797_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	7.9e-111	53.3
WP_168787586.1\|382016_383342_+\|transposase	IS110 family transposase	Q9JMN8	Wolbachia_phage	2.0e-94	42.8
WP_168787386.1\|383597_384629_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787587.1\|384896_385037_-	hypothetical protein	NA	NA	NA	NA
WP_168787588.1\|385033_386632_-	cyclic diguanylate phosphodiesterase	NA	NA	NA	NA
WP_168788948.1\|386681_388211_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.7e-17	39.5
WP_168787589.1\|388770_390333_-\|transposase	transposase	Q9MBP7	Staphylococcus_prophage	6.2e-07	21.8
WP_168787491.1\|390728_391751_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-38	34.0
391741:392844	attR	NA	NA	NA	NA

DBSCAN-SWA_4

397150 : 476689

Escherichia_phage(14.29%)

integrase,transposase

attL 454418:454432|attR 478902:478916

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787386.1\|397150_398182_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788949.1\|398244_399555_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	5.2e-116	53.9
WP_168787594.1\|399577_399994_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.1e-47	64.2
WP_168787595.1\|400435_400624_+	hypothetical protein	NA	NA	NA	NA
WP_168787596.1\|401147_401738_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_168787597.1\|402208_402658_+	hypothetical protein	A0A077SL42	Escherichia_phage	3.4e-30	53.2
WP_168787598.1\|405251_406613_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A2K9L821	Tupanvirus	1.9e-28	31.7
WP_168787599.1\|406673_408491_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	2.3e-146	47.5
WP_168787600.1\|410783_411716_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787601.1\|411778_412900_+	EAL domain-containing protein	NA	NA	NA	NA
WP_168787602.1\|413184_414567_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA
WP_168788950.1\|415147_416200_+	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788951.1\|416618_417071_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA
WP_168787603.1\|417080_419360_+	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_168788952.1\|419383_420517_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	A0A1V0SAG5	Catovirus	6.3e-25	28.3
WP_168787604.1\|420524_421763_+	UDP-N-acetyl-D-mannosamine dehydrogenase	M1HNJ7	Paramecium_bursaria_Chlorella_virus	1.4e-25	26.4
WP_168787605.1\|421759_423049_+	flippase	NA	NA	NA	NA
WP_168787606.1\|423041_424226_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_168787607.1\|424222_425506_+	hypothetical protein	NA	NA	NA	NA
WP_168787608.1\|425558_426614_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_168787609.1\|426708_427458_+	hypothetical protein	NA	NA	NA	NA
WP_168787610.1\|427473_428220_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_168787611.1\|428575_429481_+	hypothetical protein	NA	NA	NA	NA
WP_168787612.1\|430833_432039_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168787613.1\|432047_432926_-\|integrase	tyrosine-type recombinase/integrase	A0A0F6SJK8	Mycobacterium_phage	3.4e-10	27.2
WP_168787614.1\|433226_434465_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.2e-07	30.1
WP_168787615.1\|434461_435406_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787616.1\|436215_437604_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787617.1\|438297_439605_+	group II intron reverse transcriptase/maturase	H7BVN0	unidentified_phage	1.5e-09	24.9
WP_168787618.1\|440537_441419_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	6.5e-70	47.1
WP_168787619.1\|441411_442008_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787620.1\|443830_444121_+	hypothetical protein	NA	NA	NA	NA
WP_168788953.1\|445368_445641_+	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_168787621.1\|445658_446606_-\|integrase	tyrosine-type recombinase/integrase	A0A166YH27	Gordonia_phage	1.9e-06	27.9
WP_168787622.1\|447390_447765_-	hypothetical protein	NA	NA	NA	NA
WP_168787623.1\|447761_447989_-	hypothetical protein	NA	NA	NA	NA
WP_168788954.1\|448797_450318_+	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	1.4e-08	25.4
WP_168787624.1\|450322_450643_+	hypothetical protein	NA	NA	NA	NA
WP_168787625.1\|450639_451224_+	hypothetical protein	NA	NA	NA	NA
WP_168787626.1\|451755_452688_-	H-NS histone family protein	NA	NA	NA	NA
WP_168787627.1\|454394_455036_+	hypothetical protein	NA	NA	NA	NA
454418:454432	attL	NA	NA	NA	NA
WP_168787628.1\|455280_456000_+	hypothetical protein	NA	NA	NA	NA
WP_168787629.1\|456511_457243_-\|transposase	IS6 family transposase	NA	NA	NA	NA
WP_168787630.1\|457389_458523_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787631.1\|458946_460242_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787632.1\|460525_464191_+	hypothetical protein	NA	NA	NA	NA
WP_168787633.1\|464253_464490_+\|transposase	transposase	NA	NA	NA	NA
WP_168787634.1\|464524_465247_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.7e-37	40.9
WP_168787635.1\|465596_466643_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_168787636.1\|467662_468538_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_168787637.1\|468912_470214_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787314.1\|471624_472809_-	hypothetical protein	NA	NA	NA	NA
WP_168787638.1\|472820_474647_-	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_168787639.1\|475255_476689_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
478902:478916	attR	NA	NA	NA	NA

DBSCAN-SWA_5

485841 : 551048

Stx2-converting_phage(14.29%)

integrase,transposase

attL 487462:487478|attR 554858:554874

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787650.1\|485841_486183_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	9.1e-12	48.6
WP_168787651.1\|486689_486950_-	hypothetical protein	NA	NA	NA	NA
WP_168787652.1\|487000_487399_+	hypothetical protein	NA	NA	NA	NA
WP_168787653.1\|487391_488870_+\|transposase	IS21 family transposase	NA	NA	NA	NA
487462:487478	attL	NA	NA	NA	NA
WP_168788955.1\|488880_489648_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	6.7e-47	41.6
WP_168787654.1\|489669_489909_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_168787655.1\|489902_490316_-	hypothetical protein	NA	NA	NA	NA
WP_168787656.1\|491346_493410_-	recombinase family protein	NA	NA	NA	NA
WP_168788956.1\|494461_494860_-	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_168788957.1\|495106_495424_-	hypothetical protein	NA	NA	NA	NA
WP_168788959.1\|495408_495573_+\|transposase	transposase	NA	NA	NA	NA
WP_168788958.1\|495614_497144_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.8e-131	48.8
WP_168787657.1\|497146_497740_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA
WP_168787523.1\|498666_499843_+\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.4e-43	52.4
WP_168787658.1\|501289_502825_-	hypothetical protein	NA	NA	NA	NA
WP_168787659.1\|508600_508735_-	hypothetical protein	NA	NA	NA	NA
WP_168787660.1\|509089_510670_+	isocitrate lyase	NA	NA	NA	NA
WP_168787661.1\|510903_511638_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.6e-21	31.0
WP_168787662.1\|512748_514272_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_168787663.1\|514268_518249_+	hypothetical protein	NA	NA	NA	NA
WP_168787664.1\|518306_518504_+	hypothetical protein	NA	NA	NA	NA
WP_168787665.1\|518841_519633_+	DUF4231 domain-containing protein	NA	NA	NA	NA
WP_168787666.1\|519732_520191_+	hypothetical protein	NA	NA	NA	NA
WP_168787667.1\|520663_522025_-	hypothetical protein	NA	NA	NA	NA
WP_168787668.1\|522555_522741_-	hypothetical protein	NA	NA	NA	NA
WP_168787669.1\|522753_523845_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168787612.1\|524122_525328_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168787613.1\|525336_526215_-\|integrase	tyrosine-type recombinase/integrase	A0A0F6SJK8	Mycobacterium_phage	3.4e-10	27.2
WP_168787670.1\|526502_527501_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787615.1\|527497_528442_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787671.1\|528438_529677_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.2e-07	30.1
WP_168787672.1\|529729_530518_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	5.4e-15	26.3
WP_168787673.1\|531049_534391_+	AAA family ATPase	NA	NA	NA	NA
WP_168787674.1\|534565_536272_-	fatty-acid--CoA ligase	A0A1V0SBX8	Catovirus	7.8e-19	22.5
WP_168787675.1\|536501_536810_-	hypothetical protein	NA	NA	NA	NA
WP_168787676.1\|537069_538200_+	HAMP domain-containing histidine kinase	A0A1B0VMK3	Pseudomonas_phage	9.2e-69	41.2
WP_168787677.1\|538653_539091_-	response regulator	Q56AR1	Bacillus_thuringiensis_phage	4.7e-05	28.7
WP_168788960.1\|539449_539950_+	HAD family phosphatase	NA	NA	NA	NA
WP_168787678.1\|540060_540933_+	manganese catalase family protein	NA	NA	NA	NA
WP_168787679.1\|541054_541756_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_168787680.1\|542172_542556_-	hypothetical protein	NA	NA	NA	NA
WP_168787681.1\|543310_543865_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_168787682.1\|543960_544665_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168787683.1\|544848_545700_-	formate/nitrite transporter family protein	E7DYY8	Enterobacteria_phage	2.9e-43	39.4
WP_168787684.1\|545911_546661_+	transglutaminase family protein	NA	NA	NA	NA
WP_168787685.1\|546964_547768_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_168787686.1\|547760_549362_+	response regulator	W8CYF6	Bacillus_phage	1.9e-22	30.5
WP_168787687.1\|550070_551048_-\|transposase	IS5 family transposase	A0A077SK28	Escherichia_phage	1.1e-70	46.3
554858:554874	attR	NA	NA	NA	NA

DBSCAN-SWA_6

573995 : 629063

Thermobifida_phage(25.0%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787702.1\|573995_574370_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_168787703.1\|574474_574771_-	CsbD family protein	NA	NA	NA	NA
WP_168787704.1\|576883_577192_-	hypothetical protein	NA	NA	NA	NA
WP_168787705.1\|579688_580078_-	PRC-barrel domain containing protein	NA	NA	NA	NA
WP_168787706.1\|580364_580580_+	CsbD family protein	NA	NA	NA	NA
WP_168787707.1\|581033_582152_+\|transposase	transposase	A0A0R8V9X2	Thermobifida_phage	5.8e-23	35.6
WP_168788966.1\|582241_583027_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_168787708.1\|582989_583367_-	hypothetical protein	NA	NA	NA	NA
WP_168787709.1\|583454_583838_-	hypothetical protein	NA	NA	NA	NA
WP_168787710.1\|584083_584551_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_168787711.1\|584575_584983_+	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	7.3e-08	30.0
WP_168787712.1\|585020_585239_+	hypothetical protein	NA	NA	NA	NA
WP_168787713.1\|586778_587498_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.8e-46	47.8
WP_168787714.1\|587522_587858_-	hypothetical protein	NA	NA	NA	NA
WP_168787715.1\|588720_589326_+	hypothetical protein	NA	NA	NA	NA
WP_168787716.1\|589446_589764_-	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA
WP_168787717.1\|589763_590006_-	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA
WP_168787718.1\|590637_590808_+	hypothetical protein	NA	NA	NA	NA
WP_168787719.1\|591316_592249_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_168787720.1\|595910_596081_+	hypothetical protein	NA	NA	NA	NA
WP_168787721.1\|596461_597586_-	flippase-like domain-containing protein	NA	NA	NA	NA
WP_168788967.1\|597631_598132_-	universal stress protein	NA	NA	NA	NA
WP_168787722.1\|602064_602667_-	hypothetical protein	NA	NA	NA	NA
WP_168787723.1\|603057_604713_+	SulP family inorganic anion transporter	NA	NA	NA	NA
WP_168787724.1\|604779_604944_-	hypothetical protein	NA	NA	NA	NA
WP_168787725.1\|605408_605549_-	hypothetical protein	NA	NA	NA	NA
WP_168787726.1\|607022_607427_-	ATP-binding protein	NA	NA	NA	NA
WP_168787727.1\|607339_607888_-	hypothetical protein	NA	NA	NA	NA
WP_168787728.1\|608332_608779_+	hypothetical protein	NA	NA	NA	NA
WP_168787315.1\|608902_609061_+	hypothetical protein	NA	NA	NA	NA
WP_168787729.1\|609914_610238_+	hypothetical protein	NA	NA	NA	NA
WP_168787730.1\|612369_612726_-	STAS/SEC14 domain-containing protein	NA	NA	NA	NA
WP_168787316.1\|614164_614329_+	hypothetical protein	NA	NA	NA	NA
WP_168787731.1\|614325_614766_+	ester cyclase	NA	NA	NA	NA
WP_168787732.1\|615023_616061_+	NAD-dependent isocitrate dehydrogenase	NA	NA	NA	NA
WP_168787733.1\|617732_618875_-	ABC transporter permease	NA	NA	NA	NA
WP_168787734.1\|618871_619816_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.3e-19	29.4
WP_168787735.1\|619812_620757_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_168787736.1\|620753_621455_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_168787737.1\|622285_622513_+	hypothetical protein	NA	NA	NA	NA
WP_168787738.1\|625459_626593_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787739.1\|626874_627685_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_168787740.1\|627767_629063_+\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_7

636117 : 707872

Mycobacterium_phage(33.33%)

integrase,transposase

attL 634560:634578|attR 702720:702738

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
634560:634578	attL	NA	NA	NA	NA
WP_168787746.1\|636117_636837_-\|transposase	IS6 family transposase	A0A0N9SKD3	Staphylococcus_phage	5.2e-33	36.8
WP_168788969.1\|637154_637934_-	ABC transporter ATP-binding protein	A0A285PWH2	Cedratvirus	2.7e-11	25.4
WP_168787747.1\|637952_639101_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
WP_168787748.1\|639100_640204_-	dimethyl sulfone monooxygenase SfnG	NA	NA	NA	NA
WP_168787749.1\|640232_640814_-	FMN reductase	NA	NA	NA	NA
WP_168787750.1\|642181_643426_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_168788970.1\|644476_644752_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_168787751.1\|644748_645072_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_168787752.1\|645687_646911_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787753.1\|648461_650786_+	hypothetical protein	NA	NA	NA	NA
WP_168788971.1\|650778_651270_+	hypothetical protein	NA	NA	NA	NA
WP_168787754.1\|651347_651851_+	hypothetical protein	NA	NA	NA	NA
WP_168787755.1\|652197_652344_+	hypothetical protein	NA	NA	NA	NA
WP_168787756.1\|652602_653508_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787757.1\|653668_655114_+	MHS family MFS transporter	NA	NA	NA	NA
WP_168788972.1\|655280_656159_+	DMT family transporter	NA	NA	NA	NA
WP_168787758.1\|656338_657289_+	ketopantoate reductase family protein	NA	NA	NA	NA
WP_168787759.1\|657285_657678_+	VOC family protein	NA	NA	NA	NA
WP_168787760.1\|657679_658138_+	MaoC family dehydratase	NA	NA	NA	NA
WP_168787761.1\|658137_659358_+	CoA transferase	NA	NA	NA	NA
WP_168787762.1\|659357_660191_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_168787763.1\|660209_660998_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_168787764.1\|661075_662437_+	MHS family MFS transporter	NA	NA	NA	NA
WP_168787765.1\|664921_665224_-	hypothetical protein	NA	NA	NA	NA
WP_168787766.1\|665223_666054_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	7.1e-34	35.9
WP_168787472.1\|667300_668320_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787767.1\|671243_671774_+	hypothetical protein	NA	NA	NA	NA
WP_168787768.1\|672870_673164_-	hypothetical protein	NA	NA	NA	NA
WP_168787769.1\|673764_674448_+	hypothetical protein	NA	NA	NA	NA
WP_168787770.1\|674459_675176_+	RES domain-containing protein	NA	NA	NA	NA
WP_168787771.1\|675559_675832_+	hypothetical protein	NA	NA	NA	NA
WP_168787772.1\|676139_676394_+	hypothetical protein	NA	NA	NA	NA
WP_168787773.1\|677412_678795_+	hypothetical protein	NA	NA	NA	NA
WP_168787774.1\|679041_680268_-\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168787775.1\|680367_681324_-	hypothetical protein	NA	NA	NA	NA
WP_168788973.1\|681561_682425_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_168787776.1\|684278_684731_-\|transposase	transposase	NA	NA	NA	NA
WP_168788974.1\|684837_686058_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	8.4e-100	48.6
WP_168787777.1\|686686_690325_-	hypothetical protein	NA	NA	NA	NA
WP_168787778.1\|690334_691381_-	hypothetical protein	NA	NA	NA	NA
WP_168787779.1\|692567_693092_-	histidine phosphatase family protein	NA	NA	NA	NA
WP_168787317.1\|693911_694394_-	hypothetical protein	NA	NA	NA	NA
WP_168787780.1\|694362_695049_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_168788975.1\|695304_695871_-\|transposase	transposase	NA	NA	NA	NA
WP_168788976.1\|696448_696919_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_168787318.1\|697526_697928_+	hypothetical protein	NA	NA	NA	NA
WP_168787781.1\|697924_698491_+	TIGR01841 family phasin	NA	NA	NA	NA
WP_168787782.1\|698631_699375_+	acetoacetyl-CoA reductase	NA	NA	NA	NA
WP_168787783.1\|699777_700023_+	hypothetical protein	NA	NA	NA	NA
WP_168787784.1\|700096_700246_+	hypothetical protein	NA	NA	NA	NA
WP_168787785.1\|700296_701742_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_168787786.1\|703466_703811_-	hypothetical protein	NA	NA	NA	NA
702720:702738	attR	NA	NA	NA	NA
WP_168787787.1\|703968_705237_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
WP_168787788.1\|705308_705650_-	hypothetical protein	NA	NA	NA	NA
WP_168787361.1\|706894_707872_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8

DBSCAN-SWA_8

739756 : 806768

Mycobacterium_phage(25.0%)

integrase,transposase

attL 774700:774717|attR 807187:807204

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788923.1\|739756_740731_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	3.6e-45	33.0
WP_168787816.1\|741529_741727_+	DUF2970 domain-containing protein	NA	NA	NA	NA
WP_168787817.1\|742557_742869_+	High potential iron-sulfur protein	NA	NA	NA	NA
WP_168787818.1\|743256_743457_+	hypothetical protein	NA	NA	NA	NA
WP_168788981.1\|743945_744140_-	hypothetical protein	NA	NA	NA	NA
WP_168787819.1\|746486_746819_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_168787820.1\|747007_747658_+	response regulator transcription factor	NA	NA	NA	NA
WP_168787821.1\|747727_749146_-	purine-cytosine permease-like transporter	NA	NA	NA	NA
WP_168788982.1\|749163_750213_-	porin	NA	NA	NA	NA
WP_168787822.1\|750487_750991_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_168787823.1\|751052_751406_-	hypothetical protein	NA	NA	NA	NA
WP_168787824.1\|751420_752626_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_168787825.1\|752679_754029_-	acetamidase	NA	NA	NA	NA
WP_168787826.1\|754298_755741_+	PAS domain S-box protein	NA	NA	NA	NA
WP_168787827.1\|755883_756213_+	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_168787828.1\|756221_757244_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_168787829.1\|757272_757551_+	SemiSWEET transporter	NA	NA	NA	NA
WP_168787830.1\|757609_758131_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	6.0e-07	36.3
WP_168787319.1\|758577_758925_+	hypothetical protein	NA	NA	NA	NA
WP_168787831.1\|759040_759370_+	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA
WP_168787832.1\|759376_760381_+	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_168787833.1\|760468_761125_-	response regulator transcription factor	NA	NA	NA	NA
WP_168787834.1\|761380_762712_+	acetamidase	NA	NA	NA	NA
WP_168787835.1\|762947_764201_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_168787836.1\|764200_764542_+	hypothetical protein	NA	NA	NA	NA
WP_168787837.1\|764551_765031_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_168787838.1\|765108_766593_-	PAS domain S-box protein	NA	NA	NA	NA
WP_168787839.1\|767068_768511_+	purine-cytosine permease-like transporter	NA	NA	NA	NA
WP_168788983.1\|769234_769951_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.7e-24	32.3
WP_168787840.1\|770136_771054_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787841.1\|771275_773111_+	sulfatase-like hydrolase/transferase	A0A1V0SA98	Catovirus	4.6e-25	22.2
WP_168787842.1\|774566_774782_-	hypothetical protein	NA	NA	NA	NA
774700:774717	attL	NA	NA	NA	NA
WP_168787843.1\|775207_775528_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_168787844.1\|776066_777371_-	group II intron reverse transcriptase/maturase	H7BVN0	unidentified_phage	3.1e-07	29.6
WP_168787845.1\|779515_780448_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787846.1\|781893_782298_+	DoxX family protein	NA	NA	NA	NA
WP_168787847.1\|782332_783385_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_168787787.1\|784701_785970_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
WP_168787848.1\|786177_786996_+	dioxygenase	NA	NA	NA	NA
WP_168787849.1\|787155_787575_+	hypothetical protein	NA	NA	NA	NA
WP_168787774.1\|789523_790750_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168787850.1\|791851_792286_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787851.1\|792710_793343_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_168787852.1\|793858_794017_+	hypothetical protein	NA	NA	NA	NA
WP_168787853.1\|794813_795083_-	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_168787854.1\|796187_797159_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168787787.1\|797990_799259_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
WP_168787855.1\|799875_800367_-	hypothetical protein	NA	NA	NA	NA
WP_168787856.1\|802109_802502_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_168787857.1\|802555_803389_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_168787858.1\|804291_805554_+	MHS family MFS transporter	Q6JIH2	Burkholderia_virus	1.1e-59	34.4
WP_168787859.1\|806474_806768_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
807187:807204	attR	NA	NA	NA	NA

DBSCAN-SWA_9

886615 : 990708

Burkholderia_virus(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787907.1\|886615_887635_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787908.1\|887884_889039_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787909.1\|889647_890661_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787910.1\|891301_892237_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787911.1\|892314_893721_+	FAD-dependent tricarballylate dehydrogenase TcuA	NA	NA	NA	NA
WP_168787912.1\|893707_894877_+	tricarballylate utilization 4Fe-4S protein TcuB	NA	NA	NA	NA
WP_168788993.1\|894938_896270_+	MFS transporter	Q6JIH2	Burkholderia_virus	8.4e-61	37.0
WP_168788994.1\|899218_899401_+\|transposase	transposase	NA	NA	NA	NA
WP_168787913.1\|899704_900907_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_168787914.1\|901555_902737_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_168787915.1\|902790_902997_-	hypothetical protein	NA	NA	NA	NA
WP_168787916.1\|903021_903993_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787917.1\|904124_905759_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168787918.1\|905751_907368_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	3.3e-35	32.0
WP_168787919.1\|907389_908049_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_168787920.1\|908164_909013_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_168787921.1\|909119_910286_-	extradiol dioxygenase	NA	NA	NA	NA
WP_168787922.1\|910362_911253_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168787923.1\|911309_912536_-	hypothetical protein	NA	NA	NA	NA
WP_168787924.1\|912585_913080_-	flavin reductase family protein	NA	NA	NA	NA
WP_168788995.1\|913411_914554_-	porin	NA	NA	NA	NA
WP_168787925.1\|914683_916045_-	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA
WP_168787787.1\|917024_918293_+\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
WP_168787926.1\|918503_919550_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788923.1\|919577_920552_-\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	3.6e-45	33.0
WP_168787927.1\|922532_923426_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_168787928.1\|924416_925940_-	succinate CoA transferase	NA	NA	NA	NA
WP_168787929.1\|926108_927023_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787930.1\|927609_927918_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_168788996.1\|928060_928486_+	hypothetical protein	NA	NA	NA	NA
WP_168787931.1\|929144_929708_-	EAL domain-containing protein	NA	NA	NA	NA
WP_168787932.1\|929808_930435_-	hypothetical protein	NA	NA	NA	NA
WP_168787933.1\|930852_931245_-	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_168788923.1\|932419_933394_+\|transposase	IS630 family transposase	S5VXX4	Leptospira_phage	3.6e-45	33.0
WP_168787934.1\|933544_934261_-	hypothetical protein	NA	NA	NA	NA
WP_168787935.1\|934260_934449_-	hypothetical protein	NA	NA	NA	NA
WP_168787936.1\|934565_935684_-	putative 2-aminoethylphosphonate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.0e-27	38.0
WP_168787937.1\|935725_936979_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_168787938.1\|937060_938746_-	putative 2-aminoethylphosphonate ABC transporter permease subunit	NA	NA	NA	NA
WP_168787939.1\|938803_939829_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168787940.1\|940025_940901_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168787941.1\|941069_941786_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	1.6e-45	45.5
WP_168788955.1\|942449_943217_-	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	6.7e-47	41.6
WP_168787653.1\|943227_944706_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_168787652.1\|944698_945097_-	hypothetical protein	NA	NA	NA	NA
WP_168787651.1\|945147_945408_+	hypothetical protein	NA	NA	NA	NA
WP_168787942.1\|945965_947039_-	porin	NA	NA	NA	NA
WP_168787943.1\|947119_948115_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_168787944.1\|948125_948872_-	class II aldolase/adducin family protein	NA	NA	NA	NA
WP_168787945.1\|948877_950266_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_168787946.1\|950293_951313_-	TauD/TfdA family dioxygenase	NA	NA	NA	NA
WP_168787947.1\|951370_951694_-	DUF4387 domain-containing protein	NA	NA	NA	NA
WP_168787948.1\|951695_953063_-	DUF1446 domain-containing protein	NA	NA	NA	NA
WP_168787949.1\|953203_954607_-	MFS transporter	NA	NA	NA	NA
WP_168787950.1\|954716_955241_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168787321.1\|955429_955669_+	hypothetical protein	NA	NA	NA	NA
WP_168788997.1\|959479_960100_-	isochorismatase family protein	NA	NA	NA	NA
WP_168787951.1\|960366_961104_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_168787952.1\|961031_961775_-	arylmalonate decarboxylase	NA	NA	NA	NA
WP_168787953.1\|961893_962760_+	isocitrate lyase/PEP mutase family protein	NA	NA	NA	NA
WP_168787954.1\|962756_964160_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_168787955.1\|964152_964770_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_168788998.1\|965014_965422_+	cupin domain-containing protein	NA	NA	NA	NA
WP_168787956.1\|965473_966256_+	hypothetical protein	NA	NA	NA	NA
WP_168787957.1\|966260_966587_+	NIPSNAP family protein	NA	NA	NA	NA
WP_168787958.1\|966662_967979_+	MFS transporter	NA	NA	NA	NA
WP_168788999.1\|968201_969395_+	porin	NA	NA	NA	NA
WP_168787959.1\|969839_970364_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168789000.1\|970332_970878_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168787960.1\|971973_972216_-	hypothetical protein	NA	NA	NA	NA
WP_168787961.1\|972243_972522_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	9.0e-18	58.4
WP_168787962.1\|973317_974700_+	ATP-binding protein	NA	NA	NA	NA
WP_168787963.1\|974882_975671_-	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_168789001.1\|977871_978492_+	FkbM family methyltransferase	NA	NA	NA	NA
WP_168787964.1\|978920_980093_+	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_168787965.1\|980545_981799_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_168787966.1\|982003_982393_+	hypothetical protein	NA	NA	NA	NA
WP_168787967.1\|982527_984963_-	TIR domain-containing protein	NA	NA	NA	NA
WP_168787968.1\|984937_986341_-	metallophosphatase	NA	NA	NA	NA
WP_168789002.1\|987374_988337_+	SLATT domain-containing protein	NA	NA	NA	NA
WP_168787969.1\|988348_989131_+	DUF3380 domain-containing protein	D2JTA3	Pseudomonas_phage	5.7e-33	45.1
WP_168787970.1\|990006_990708_-\|transposase	IS6 family transposase	A0A0N9SKD3	Staphylococcus_phage	9.2e-35	40.2

DBSCAN-SWA_10

1010718 : 1061177

Mycobacterium_phage(25.0%)

integrase,transposase,holin

attL 1000382:1000397|attR 1037727:1037742

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1000382:1000397	attL	NA	NA	NA	NA
WP_168787983.1\|1010718_1011378_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	9.6e-26	32.6
WP_168787984.1\|1011482_1012502_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168787985.1\|1012982_1013999_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_007588886.1\|1015032_1015773_+	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	1.2e-11	28.8
WP_168787986.1\|1015860_1016727_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168787987.1\|1016945_1017392_+	VOC family protein	NA	NA	NA	NA
WP_137957868.1\|1017514_1018600_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168787988.1\|1019106_1019307_-\|integrase	integrase	NA	NA	NA	NA
WP_168787989.1\|1019547_1020366_-	ATP-binding protein	A0A1B1P8D0	Bacillus_phage	6.6e-08	32.9
WP_168787612.1\|1021517_1022723_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168787613.1\|1022731_1023610_-\|integrase	tyrosine-type recombinase/integrase	A0A0F6SJK8	Mycobacterium_phage	3.4e-10	27.2
WP_168787990.1\|1023871_1024315_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787991.1\|1024494_1025754_+\|integrase	tyrosine-type recombinase/integrase	R4TQT9	Mycobacterium_phage	1.6e-05	27.4
WP_168787992.1\|1025750_1026698_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787993.1\|1026690_1027707_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168789004.1\|1027843_1028275_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787994.1\|1028560_1029991_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_168787995.1\|1030464_1030947_+	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_168787996.1\|1031042_1031369_-	ester cyclase	NA	NA	NA	NA
WP_168787406.1\|1031680_1033241_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.9e-10	32.7
WP_168787997.1\|1033694_1035053_+	hypothetical protein	NA	NA	NA	NA
WP_168787322.1\|1035555_1035816_+	hypothetical protein	NA	NA	NA	NA
WP_168787998.1\|1035970_1037101_-	sensor histidine kinase	A0A1B0VMK3	Pseudomonas_phage	2.0e-63	39.4
WP_168789005.1\|1037292_1039677_+	PAS domain S-box protein	NA	NA	NA	NA
1037727:1037742	attR	NA	NA	NA	NA
WP_168787999.1\|1039956_1040118_-	cold-shock protein	NA	NA	NA	NA
WP_168789006.1\|1040167_1040623_-	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_168788000.1\|1043980_1044433_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_168788001.1\|1044457_1044865_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_168788002.1\|1045071_1045635_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_168788003.1\|1046126_1046330_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	4.1e-20	68.7
WP_168789007.1\|1046526_1046757_+	hypothetical protein	NA	NA	NA	NA
WP_168788004.1\|1047141_1047717_+	hypothetical protein	NA	NA	NA	NA
WP_168787694.1\|1047758_1047995_+	hypothetical protein	NA	NA	NA	NA
WP_168788005.1\|1048073_1048391_+	H-NS histone family protein	NA	NA	NA	NA
WP_168788006.1\|1049134_1050013_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168788007.1\|1050145_1051201_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788008.1\|1053927_1054224_+	CsbD family protein	NA	NA	NA	NA
WP_168788009.1\|1054327_1054702_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_168789008.1\|1054749_1055007_+	hypothetical protein	NA	NA	NA	NA
WP_168788010.1\|1059492_1060209_+	hypothetical protein	NA	NA	NA	NA
WP_168788011.1\|1061030_1061177_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_11

1191474 : 1253852

Escherichia_phage(40.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788094.1\|1191474_1192194_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.0e-45	47.8
WP_168788095.1\|1192356_1193571_-	NO-inducible flavohemoprotein	NA	NA	NA	NA
WP_168789022.1\|1194149_1195352_+	NnrS family protein	NA	NA	NA	NA
WP_168788096.1\|1195680_1199505_+	nitrate reductase subunit alpha	NA	NA	NA	NA
WP_168788097.1\|1199501_1201043_+	nitrate reductase subunit beta	A0A077SL61	Escherichia_phage	1.8e-19	46.2
WP_168788098.1\|1201043_1201733_+	nitrate reductase molybdenum cofactor assembly chaperone	NA	NA	NA	NA
WP_168788099.1\|1201801_1202488_+	respiratory nitrate reductase subunit gamma	NA	NA	NA	NA
WP_168788100.1\|1202503_1203301_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_168789023.1\|1203397_1204654_+	NarK/NasA family nitrate transporter	NA	NA	NA	NA
WP_168788101.1\|1204713_1205124_+	ribonucleotide reductase subunit alpha	NA	NA	NA	NA
WP_168788102.1\|1205321_1206476_+	cytochrome P450	NA	NA	NA	NA
WP_168788103.1\|1207410_1207761_+	hypothetical protein	NA	NA	NA	NA
WP_168789024.1\|1207789_1208029_+	c-type cytochrome	NA	NA	NA	NA
WP_168788104.1\|1208094_1208247_+	hypothetical protein	NA	NA	NA	NA
WP_168787787.1\|1208310_1209579_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
WP_168788105.1\|1209738_1210263_+	hemerythrin domain-containing protein	NA	NA	NA	NA
WP_168788106.1\|1210391_1210739_+	hypothetical protein	NA	NA	NA	NA
WP_168788107.1\|1211164_1213477_+	NADP-dependent malic enzyme	NA	NA	NA	NA
WP_168788108.1\|1214274_1214457_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_168787985.1\|1215639_1216656_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788343.1\|1217133_1218153_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788109.1\|1219740_1220241_-	universal stress protein	NA	NA	NA	NA
WP_168788110.1\|1220770_1220956_+	hypothetical protein	NA	NA	NA	NA
WP_168788111.1\|1221588_1221906_-	DUF1840 domain-containing protein	NA	NA	NA	NA
WP_168788112.1\|1222263_1222446_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_168788113.1\|1222491_1224309_-	glycoside hydrolase family 15 protein	NA	NA	NA	NA
WP_168788114.1\|1224406_1225405_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_168789025.1\|1225462_1226746_-	c-type cytochrome	NA	NA	NA	NA
WP_168789026.1\|1226805_1227186_-	hypothetical protein	NA	NA	NA	NA
WP_168788115.1\|1227316_1227931_-	heme-copper oxidase subunit III	NA	NA	NA	NA
WP_168788116.1\|1227908_1229900_-	cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_168789027.1\|1229926_1230922_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_168788117.1\|1230936_1232595_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_168788118.1\|1232584_1233250_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_168788119.1\|1233242_1234241_-	hypothetical protein	NA	NA	NA	NA
WP_168788120.1\|1234215_1235322_-	mandelate racemase	NA	NA	NA	NA
WP_168788121.1\|1235326_1237174_-	thiamine pyrophosphate-requiring protein	NA	NA	NA	NA
WP_168788122.1\|1240282_1241050_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.0e-23	37.7
WP_168788123.1\|1241088_1241802_-	ABC transporter permease	NA	NA	NA	NA
WP_168788124.1\|1241798_1242488_-	histidine ABC transporter permease HisQ	NA	NA	NA	NA
WP_168788125.1\|1242609_1243383_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788126.1\|1244377_1245505_+	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_168788127.1\|1245774_1246098_+	hypothetical protein	NA	NA	NA	NA
WP_168788128.1\|1246411_1247104_-	VIT family protein	NA	NA	NA	NA
WP_168788129.1\|1247113_1247689_-	cytochrome b	NA	NA	NA	NA
WP_168788130.1\|1248028_1249375_+	sorbosone dehydrogenase family protein	NA	NA	NA	NA
WP_168788131.1\|1249836_1250076_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA
WP_168788083.1\|1250075_1250393_+	cobalamin biosynthesis protein CbiX	NA	NA	NA	NA
WP_168788132.1\|1250513_1251062_-	hypothetical protein	NA	NA	NA	NA
WP_168788133.1\|1251266_1252199_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_168787406.1\|1252291_1253852_+\|transposase	IS3 family transposase	Q6J1X2	Lactobacillus_phage	7.9e-10	32.7

DBSCAN-SWA_12

1280638 : 1361420

Escherichia_phage(25.0%)

integrase,transposase

attL 1293887:1293903|attR 1369424:1369440

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788156.1\|1280638_1281724_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168788157.1\|1281805_1282495_-	CBS domain-containing protein	NA	NA	NA	NA
WP_168788158.1\|1282716_1282983_-	UDP-glucose 4-epimerase	NA	NA	NA	NA
WP_168788159.1\|1283034_1284075_-	zinc-dependent alcohol dehydrogenase family protein	A0A0K0KVL7	Prochlorococcus_phage	9.6e-12	22.9
WP_168788160.1\|1284247_1284994_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA
WP_168788161.1\|1285165_1285624_-	universal stress protein	NA	NA	NA	NA
WP_168789031.1\|1285686_1286034_-	hypothetical protein	NA	NA	NA	NA
WP_168788162.1\|1286392_1287511_+	PAS domain S-box protein	NA	NA	NA	NA
WP_168788163.1\|1287476_1288307_-	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_012427417.1\|1293479_1293728_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA
1293887:1293903	attL	NA	NA	NA	NA
WP_168788164.1\|1294689_1295007_-	AtpZ/AtpI family protein	NA	NA	NA	NA
WP_168788165.1\|1295003_1295462_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_168788166.1\|1297091_1297529_-	hypothetical protein	NA	NA	NA	NA
WP_168788167.1\|1297551_1298064_-	flavodoxin	NA	NA	NA	NA
WP_168788168.1\|1298370_1298610_+	hypothetical protein	NA	NA	NA	NA
WP_168788169.1\|1300247_1301159_+	carbamate kinase	NA	NA	NA	NA
WP_168787326.1\|1301316_1301502_+	hypothetical protein	NA	NA	NA	NA
WP_168788170.1\|1301611_1302448_+	universal stress protein	NA	NA	NA	NA
WP_168788171.1\|1302490_1302994_+	universal stress protein	NA	NA	NA	NA
WP_168788172.1\|1302990_1303818_+	universal stress protein	A0A2H4J154	uncultured_Caudovirales_phage	5.6e-07	25.7
WP_168789032.1\|1303929_1304403_-	universal stress protein	NA	NA	NA	NA
WP_168788173.1\|1304775_1306830_+	PAS domain S-box protein	NA	NA	NA	NA
WP_168788174.1\|1306826_1307474_+	response regulator transcription factor	NA	NA	NA	NA
WP_168788175.1\|1308014_1308860_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168788176.1\|1309167_1310199_+	nitroreductase	NA	NA	NA	NA
WP_168788177.1\|1310226_1310502_-	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_168789033.1\|1311004_1311295_+	cytochrome C	NA	NA	NA	NA
WP_168788178.1\|1311341_1311716_+	DUF3564 domain-containing protein	NA	NA	NA	NA
WP_168788179.1\|1311752_1312229_+	hypothetical protein	NA	NA	NA	NA
WP_168788180.1\|1312327_1313044_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	4.2e-43	45.0
WP_168788181.1\|1313272_1314508_+	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA
WP_168788182.1\|1314554_1316807_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_168788183.1\|1317083_1317641_+	hypothetical protein	NA	NA	NA	NA
WP_168788184.1\|1320388_1322155_+	recombinase family protein	E9P5U5	Wolbachia_endosymbiont_wVitA_of_Nasonia_vitripennis_phage	2.3e-106	40.7
WP_168788185.1\|1322445_1322733_+	hypothetical protein	NA	NA	NA	NA
WP_168788186.1\|1322785_1323118_+	hypothetical protein	NA	NA	NA	NA
WP_168787656.1\|1323643_1325707_-	recombinase family protein	NA	NA	NA	NA
WP_168788187.1\|1327805_1328192_-	hypothetical protein	A0A0U4J920	Pseudomonas_phage	5.4e-29	59.8
WP_168789034.1\|1329863_1330316_+	hypothetical protein	NA	NA	NA	NA
WP_168788188.1\|1330602_1331415_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_168789035.1\|1331483_1332056_-	hypothetical protein	NA	NA	NA	NA
WP_168788189.1\|1332085_1333771_-	S8/S53 family peptidase	NA	NA	NA	NA
WP_168788190.1\|1333814_1335425_-	peptidase S1	NA	NA	NA	NA
WP_168789036.1\|1339330_1340164_+	hypothetical protein	NA	NA	NA	NA
WP_168788191.1\|1340721_1341111_+	hypothetical protein	NA	NA	NA	NA
WP_168788192.1\|1341879_1342257_-	hypothetical protein	NA	NA	NA	NA
WP_168789037.1\|1343763_1345287_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_168788193.1\|1345279_1346080_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	1.0e-29	36.1
WP_168788194.1\|1346142_1347312_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_168788195.1\|1347787_1348192_+	hypothetical protein	NA	NA	NA	NA
WP_168788196.1\|1349086_1349794_+	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA
WP_168789038.1\|1349837_1351193_+	DNA polymerase Y family protein	NA	NA	NA	NA
WP_168788197.1\|1351199_1354349_+	error-prone DNA polymerase	A0A1B1PA77	Streptomyces_phage	2.9e-88	25.8
WP_168788198.1\|1355217_1355778_-	hypothetical protein	NA	NA	NA	NA
WP_168788199.1\|1356342_1356747_-	TetR family transcriptional regulator	NA	NA	NA	NA
WP_168788200.1\|1356743_1358267_-\|integrase	integrase	NA	NA	NA	NA
WP_168788201.1\|1358368_1358617_-	hypothetical protein	NA	NA	NA	NA
WP_168788202.1\|1358613_1360149_-	hypothetical protein	NA	NA	NA	NA
WP_168787787.1\|1360151_1361420_-\|transposase	IS256 family transposase	A0A2P1JQX9	Mycobacterium_phage	2.4e-102	48.2
1369424:1369440	attR	NA	NA	NA	NA

DBSCAN-SWA_13

1396767 : 1541677

109

Wolbachia_phage(16.67%)

integrase,transposase

attL 1431303:1431340|attR 1552103:1552118

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788227.1\|1396767_1397052_+\|transposase	transposase	NA	NA	NA	NA
WP_168788228.1\|1397608_1397863_-	hypothetical protein	NA	NA	NA	NA
WP_168788229.1\|1398151_1399621_-	hypothetical protein	NA	NA	NA	NA
WP_168788230.1\|1399672_1400068_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_168788231.1\|1400067_1400280_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_168787327.1\|1400426_1400735_-	hypothetical protein	NA	NA	NA	NA
WP_168788232.1\|1400866_1401892_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788233.1\|1403023_1403302_-	hypothetical protein	NA	NA	NA	NA
WP_168788234.1\|1403995_1405324_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_168788235.1\|1405505_1405895_+	hypothetical protein	NA	NA	NA	NA
WP_168788236.1\|1407316_1407646_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_168788237.1\|1407642_1408584_-	DnaJ domain-containing protein	A0A1V0SBY2	Catovirus	1.2e-13	41.4
WP_168788238.1\|1409040_1409595_-	hypothetical protein	NA	NA	NA	NA
WP_168787328.1\|1411177_1411873_+	DUF1343 domain-containing protein	NA	NA	NA	NA
WP_168787329.1\|1411906_1412335_+	DUF1343 domain-containing protein	NA	NA	NA	NA
WP_168788239.1\|1412677_1412899_-	hypothetical protein	NA	NA	NA	NA
WP_168788240.1\|1414228_1415197_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168788241.1\|1418042_1418912_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_168788242.1\|1418996_1420241_-	3-(3-hydroxy-phenyl)propionate transporter MhpT	NA	NA	NA	NA
WP_168788243.1\|1420340_1421357_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	9.6e-49	35.4
WP_168788244.1\|1421370_1422312_-	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	6.8e-33	35.1
WP_168788245.1\|1422336_1423143_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_168788246.1\|1423161_1424112_-	3-carboxyethylcatechol 2,3-dioxygenase	NA	NA	NA	NA
WP_168788247.1\|1424113_1425964_-	bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase	NA	NA	NA	NA
WP_168788248.1\|1426213_1427026_+	DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_168787386.1\|1427293_1428325_-\|transposase	IS110 family transposase	NA	NA	NA	NA
1431303:1431340	attL	NA	NA	NA	NA
WP_168788249.1\|1431461_1432394_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
1431303:1431340	attL	NA	NA	NA	NA
WP_168788250.1\|1432408_1433158_-	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_168789040.1\|1433295_1434141_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_168788251.1\|1434150_1435779_-	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA
WP_168788252.1\|1435983_1437222_-	CoA transferase	NA	NA	NA	NA
WP_168788253.1\|1437228_1438416_-	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_168789041.1\|1438540_1439452_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168788254.1\|1440222_1441038_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_168788255.1\|1441432_1442398_+	flavin reductase family protein	NA	NA	NA	NA
WP_168788256.1\|1442453_1442996_+	hypothetical protein	NA	NA	NA	NA
WP_168788257.1\|1443100_1443655_+	VOC family protein	NA	NA	NA	NA
WP_168788258.1\|1443760_1444600_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_168788259.1\|1444748_1446122_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_168788260.1\|1446477_1447278_+	2-oxo-hepta-3-ene-1,7-dioic acid hydratase	NA	NA	NA	NA
WP_168788261.1\|1447380_1448244_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788262.1\|1448249_1449101_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_168788263.1\|1449165_1450437_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_168788264.1\|1450668_1451235_+	hypothetical protein	NA	NA	NA	NA
WP_168788265.1\|1452715_1452967_-	hypothetical protein	NA	NA	NA	NA
WP_168789042.1\|1453561_1453792_-	hypothetical protein	NA	NA	NA	NA
WP_168788266.1\|1454697_1455033_-	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_168788267.1\|1455983_1456883_-	hypothetical protein	NA	NA	NA	NA
WP_168788268.1\|1457155_1457374_-	hypothetical protein	NA	NA	NA	NA
WP_168788269.1\|1457370_1458135_-	ATP-binding protein	U5N3V8	Enterobacteria_phage	2.0e-35	37.3
WP_168788270.1\|1459043_1459406_-	hypothetical protein	NA	NA	NA	NA
WP_168788271.1\|1461280_1463161_-\|integrase	integrase	NA	NA	NA	NA
WP_168788272.1\|1463157_1464615_-\|integrase	site-specific integrase	A0A2H4J165	uncultured_Caudovirales_phage	2.5e-34	28.2
WP_168788273.1\|1464683_1465673_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	6.5e-26	31.1
WP_168788274.1\|1465885_1466155_+	hypothetical protein	NA	NA	NA	NA
WP_168788275.1\|1466869_1467061_-	hypothetical protein	NA	NA	NA	NA
WP_168788276.1\|1467795_1468542_+\|transposase	IS1634 family transposase	NA	NA	NA	NA
WP_168788277.1\|1468750_1469020_+	hypothetical protein	NA	NA	NA	NA
WP_168788278.1\|1470210_1470579_+	hypothetical protein	NA	NA	NA	NA
1469046:1469083	attR	NA	NA	NA	NA
WP_168787330.1\|1470896_1471049_+	hypothetical protein	NA	NA	NA	NA
1469046:1469083	attR	NA	NA	NA	NA
WP_168789043.1\|1471231_1472635_-	MFS transporter	NA	NA	NA	NA
WP_168788279.1\|1473631_1474708_-	porin	NA	NA	NA	NA
WP_168787465.1\|1476659_1477745_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168789044.1\|1478282_1478555_-	DUF1488 domain-containing protein	NA	NA	NA	NA
WP_168788280.1\|1479222_1480605_+\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	3.3e-76	35.8
WP_168788281.1\|1480760_1482005_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	1.1e-128	57.2
WP_168787387.1\|1482089_1483472_+\|transposase	IS4 family transposase	Q9JMP3	Wolbachia_phage	3.3e-76	35.8
WP_168787386.1\|1483654_1484686_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788282.1\|1485613_1485796_+	DUF2934 domain-containing protein	NA	NA	NA	NA
WP_168788283.1\|1486488_1488192_+	recombinase family protein	A0A1B2LRQ3	Wolbachia_phage	3.2e-105	40.5
WP_168788284.1\|1488441_1488867_-	transcriptional regulator	NA	NA	NA	NA
WP_168788285.1\|1488866_1489160_-	type II toxin-antitoxin system HigB family toxin	NA	NA	NA	NA
WP_168788286.1\|1489582_1490317_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	4.5e-24	32.3
WP_168788287.1\|1490429_1491962_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_168788288.1\|1491958_1492363_-	DUF4345 domain-containing protein	NA	NA	NA	NA
WP_168788289.1\|1492366_1492747_-	hypothetical protein	NA	NA	NA	NA
WP_168788290.1\|1492746_1493238_-	DUF1772 domain-containing protein	NA	NA	NA	NA
WP_168788291.1\|1493234_1494119_-	acetoacetate decarboxylase family protein	NA	NA	NA	NA
WP_168788292.1\|1494145_1495165_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788293.1\|1499586_1499883_+	hypothetical protein	NA	NA	NA	NA
WP_168788294.1\|1499937_1500171_+	hypothetical protein	NA	NA	NA	NA
WP_168788295.1\|1500178_1501162_+	hypothetical protein	NA	NA	NA	NA
WP_168788296.1\|1501169_1501559_+	hypothetical protein	NA	NA	NA	NA
WP_168787361.1\|1502165_1503143_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168788297.1\|1503506_1506443_-	choice-of-anchor D domain-containing protein	NA	NA	NA	NA
WP_168788298.1\|1506799_1508176_+	toll/interleukin-1 receptor domain-containing protein	NA	NA	NA	NA
WP_168788299.1\|1508178_1511694_+	hypothetical protein	NA	NA	NA	NA
WP_168788300.1\|1512622_1514464_-	hypothetical protein	NA	NA	NA	NA
WP_168788301.1\|1514603_1515620_-	hypothetical protein	NA	NA	NA	NA
WP_168788302.1\|1516878_1517856_-	ATP-binding protein	NA	NA	NA	NA
WP_168788303.1\|1517887_1519873_-\|transposase	transposase family protein	NA	NA	NA	NA
WP_168788304.1\|1519869_1520505_-	hypothetical protein	NA	NA	NA	NA
WP_168787361.1\|1523409_1524387_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168788305.1\|1524577_1526401_+	recombinase family protein	NA	NA	NA	NA
WP_168788306.1\|1526761_1526929_-	hypothetical protein	NA	NA	NA	NA
WP_168788307.1\|1527295_1528228_+	hypothetical protein	NA	NA	NA	NA
WP_168788308.1\|1528430_1530293_+	hypothetical protein	NA	NA	NA	NA
WP_168789045.1\|1530349_1530898_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_168788309.1\|1531060_1531663_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_168789046.1\|1532166_1532772_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	3.8e-37	42.0
WP_168788310.1\|1532787_1533681_-\|transposase	transposase	NA	NA	NA	NA
WP_168789047.1\|1533755_1534052_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	3.0e-11	47.5
WP_168788311.1\|1534096_1534510_-	hypothetical protein	NA	NA	NA	NA
WP_168787491.1\|1534853_1535876_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-38	34.0
WP_168789048.1\|1535913_1536132_-	hypothetical protein	NA	NA	NA	NA
WP_168788312.1\|1536190_1536982_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	9.3e-76	58.3
WP_168788313.1\|1538047_1539304_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788314.1\|1539300_1540686_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788315.1\|1540672_1541677_+\|integrase	site-specific integrase	A0A1P8DJJ6	Virus_Rctr41k	3.8e-05	21.5
1552103:1552118	attR	NA	NA	NA	NA

DBSCAN-SWA_14

1620287 : 1653195

Stx2-converting_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788374.1\|1620287_1621010_+\|transposase	IS6 family transposase	A0A0N9SKD3	Staphylococcus_phage	2.8e-34	41.8
WP_168788375.1\|1621540_1622521_+	nitronate monooxygenase	NA	NA	NA	NA
WP_168788376.1\|1624152_1624518_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_168788377.1\|1624514_1624811_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_168788378.1\|1625841_1626633_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_168788379.1\|1626709_1627474_-	SDR family oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	7.0e-20	34.3
WP_168788380.1\|1627612_1628557_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168789058.1\|1630946_1631267_-	biotin/lipoyl-binding protein	NA	NA	NA	NA
WP_168788381.1\|1631483_1632272_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788382.1\|1632538_1633336_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_168788383.1\|1633524_1634466_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_168788384.1\|1636525_1636927_-	tautomerase family protein	NA	NA	NA	NA
WP_168788385.1\|1636970_1637894_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788386.1\|1637981_1638818_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_168789059.1\|1638864_1639347_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_168788387.1\|1639480_1639909_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_168788388.1\|1640138_1641089_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_168788389.1\|1641292_1642600_+	epoxide hydrolase	NA	NA	NA	NA
WP_168788390.1\|1642702_1643755_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788391.1\|1644270_1644744_+	hypothetical protein	NA	NA	NA	NA
WP_168789060.1\|1645102_1645777_-	response regulator transcription factor	NA	NA	NA	NA
WP_168788392.1\|1645659_1646505_-	PAS domain S-box protein	NA	NA	NA	NA
WP_168788393.1\|1646873_1647314_+\|transposase	transposase	A0A0P0ZBP6	Stx2-converting_phage	2.8e-13	36.8
WP_168788394.1\|1647319_1647610_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	2.6e-31	67.0
WP_168788395.1\|1647640_1649227_+\|transposase	IS66 family transposase	A0A0P0ZBS5	Stx2-converting_phage	1.8e-131	56.8
WP_168787557.1\|1649722_1650856_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787739.1\|1651006_1651817_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_168787740.1\|1651899_1653195_+\|transposase	IS701 family transposase	NA	NA	NA	NA

DBSCAN-SWA_15

1725935 : 1813772

Mycobacterium_phage(26.67%)

integrase,transposase

attL 1791417:1791438|attR 1805946:1805967

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787653.1\|1725935_1727414_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_168787652.1\|1727406_1727805_-	hypothetical protein	NA	NA	NA	NA
WP_168787651.1\|1727855_1728116_+	hypothetical protein	NA	NA	NA	NA
WP_168788440.1\|1728689_1730318_-	long-chain-fatty-acid--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	5.7e-19	23.7
WP_168788441.1\|1730343_1730688_-	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA
WP_168788442.1\|1730687_1731404_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_168788443.1\|1731405_1731966_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_168788444.1\|1731984_1732833_-	taurine dioxygenase	NA	NA	NA	NA
WP_168788445.1\|1732843_1733824_-	quinone oxidoreductase	NA	NA	NA	NA
WP_168788446.1\|1734005_1735325_-	MFS transporter	NA	NA	NA	NA
WP_168788447.1\|1735478_1736534_-	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_168788448.1\|1736740_1737742_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_168788449.1\|1738860_1739358_+	MaoC family dehydratase	NA	NA	NA	NA
WP_168788450.1\|1739360_1741091_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA
WP_168789069.1\|1741066_1741510_-	EAL domain-containing protein	NA	NA	NA	NA
WP_168789070.1\|1742009_1743134_-	porin	NA	NA	NA	NA
WP_168789071.1\|1743330_1746030_-	AAA family ATPase	NA	NA	NA	NA
WP_168788451.1\|1746266_1747208_+	universal stress protein	NA	NA	NA	NA
WP_168788452.1\|1747334_1747709_+	BON domain-containing protein	NA	NA	NA	NA
WP_168789072.1\|1748207_1749209_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_168788453.1\|1749454_1751257_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_168788454.1\|1752198_1752369_-	DNA-binding protein HU	NA	NA	NA	NA
WP_168788455.1\|1752454_1752649_-\|transposase	transposase	NA	NA	NA	NA
WP_168788456.1\|1752959_1754723_-	PAS domain S-box protein	NA	NA	NA	NA
WP_168788457.1\|1755005_1755329_+	hypothetical protein	NA	NA	NA	NA
WP_168788458.1\|1755764_1756121_-	BON domain-containing protein	NA	NA	NA	NA
WP_168788459.1\|1756214_1757246_+\|transposase	IS1595 family transposase	NA	NA	NA	NA
WP_168788460.1\|1757671_1757902_+	hypothetical protein	NA	NA	NA	NA
WP_168788461.1\|1758063_1759080_-	hypothetical protein	NA	NA	NA	NA
WP_168788462.1\|1759504_1760536_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_168788463.1\|1761942_1763007_+	ornithine cyclodeaminase	A0A1V0SL93	Klosneuvirus	1.0e-101	53.6
WP_168788464.1\|1763043_1763463_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_168788465.1\|1763522_1764695_-	amidohydrolase	NA	NA	NA	NA
WP_168789073.1\|1764784_1766212_-	amidase family protein	NA	NA	NA	NA
WP_168788466.1\|1766298_1767378_-	porin	NA	NA	NA	NA
WP_168788467.1\|1767509_1768838_-	MFS transporter	Q6JIH2	Burkholderia_virus	3.0e-79	39.6
WP_168788468.1\|1768967_1769924_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168788469.1\|1770945_1771401_+	DUF2384 domain-containing protein	NA	NA	NA	NA
WP_168789074.1\|1771397_1771868_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_168788470.1\|1771940_1772504_+	D-alanyl-D-alanine dipeptidase	NA	NA	NA	NA
WP_168788471.1\|1772569_1774177_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788472.1\|1774232_1775303_+	ABC transporter permease	NA	NA	NA	NA
WP_168788473.1\|1775367_1776282_+	ABC transporter permease	NA	NA	NA	NA
WP_168788474.1\|1776283_1777162_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-12	29.2
WP_168788475.1\|1777158_1777941_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.5e-20	32.4
WP_168788476.1\|1778487_1778682_+	hypothetical protein	NA	NA	NA	NA
WP_168788477.1\|1778804_1779071_-	hypothetical protein	NA	NA	NA	NA
WP_168788478.1\|1779335_1780511_+	porin	NA	NA	NA	NA
WP_168788479.1\|1781070_1781640_-	hypothetical protein	NA	NA	NA	NA
WP_168788480.1\|1781937_1782396_-	hypothetical protein	F8TUL1	EBPR_podovirus	6.7e-10	33.6
WP_168789075.1\|1784199_1785420_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168788481.1\|1785546_1785909_-	hypothetical protein	NA	NA	NA	NA
WP_168788482.1\|1785905_1787792_-\|integrase	integrase	A0A2H4J185	uncultured_Caudovirales_phage	2.0e-36	24.8
WP_168788483.1\|1787788_1789669_-\|integrase	integrase	NA	NA	NA	NA
WP_168788484.1\|1789665_1791114_-\|integrase	site-specific integrase	NA	NA	NA	NA
1791417:1791438	attL	NA	NA	NA	NA
WP_168787612.1\|1791794_1793000_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168787613.1\|1793008_1793887_-\|integrase	tyrosine-type recombinase/integrase	A0A0F6SJK8	Mycobacterium_phage	3.4e-10	27.2
WP_168788485.1\|1794174_1794618_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788486.1\|1794797_1795103_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787361.1\|1795143_1796121_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168789076.1\|1796296_1797226_+\|integrase	tyrosine-type recombinase/integrase	R4TQT9	Mycobacterium_phage	1.2e-05	27.4
WP_168787992.1\|1797222_1798170_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787993.1\|1798162_1799179_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168788487.1\|1799179_1799851_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787615.1\|1799847_1800792_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788488.1\|1800788_1801976_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.1e-07	30.1
WP_168787361.1\|1802003_1802981_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168787613.1\|1803496_1804375_+\|integrase	tyrosine-type recombinase/integrase	A0A0F6SJK8	Mycobacterium_phage	3.4e-10	27.2
WP_168787612.1\|1804383_1805589_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_168788489.1\|1806155_1807331_+\|transposase	IS91 family transposase	NA	NA	NA	NA
1805946:1805967	attR	NA	NA	NA	NA
WP_168789077.1\|1808119_1808368_+	hypothetical protein	NA	NA	NA	NA
WP_168788490.1\|1808785_1809055_+	hypothetical protein	NA	NA	NA	NA
WP_168788491.1\|1809514_1810873_+	hypothetical protein	NA	NA	NA	NA
WP_168788492.1\|1811345_1811804_-	hypothetical protein	NA	NA	NA	NA
WP_168789078.1\|1812160_1813069_-	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	1.0e-102	56.8
WP_168788493.1\|1813010_1813772_-\|transposase	IS6 family transposase	A0A0N9SKD3	Staphylococcus_phage	3.8e-34	39.5

DBSCAN-SWA_16

2034528 : 2120020

Mycobacterium_phage(30.0%)

integrase,transposase

attL 2039143:2039202|attR 2049736:2049869

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788315.1\|2034528_2035533_-\|integrase	site-specific integrase	A0A1P8DJJ6	Virus_Rctr41k	3.8e-05	21.5
WP_168788314.1\|2035519_2036905_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788313.1\|2036901_2038158_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2039143:2039202	attL	NA	NA	NA	NA
WP_168787614.1\|2039276_2040515_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.2e-07	30.1
WP_168787615.1\|2040511_2041456_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788487.1\|2041452_2042124_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787993.1\|2042124_2043141_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787992.1\|2043133_2044081_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787991.1\|2044077_2045337_-\|integrase	tyrosine-type recombinase/integrase	R4TQT9	Mycobacterium_phage	1.6e-05	27.4
WP_168787774.1\|2045545_2046772_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168788651.1\|2046813_2047485_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787615.1\|2047481_2048426_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787614.1\|2048422_2049661_-\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.2e-07	30.1
WP_168788652.1\|2050009_2051551_+	acetolactate synthase large subunit	NA	NA	NA	NA
2049736:2049869	attR	NA	NA	NA	NA
WP_168788653.1\|2051614_2052523_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_168788654.1\|2052576_2053020_+	cupin domain-containing protein	NA	NA	NA	NA
WP_168788655.1\|2054786_2055083_+	DUF1330 domain-containing protein	NA	NA	NA	NA
WP_168788656.1\|2055150_2055921_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_168788657.1\|2056335_2057736_+	GntP family permease	NA	NA	NA	NA
WP_168788658.1\|2057806_2058988_+	porin	NA	NA	NA	NA
WP_168788659.1\|2060264_2061404_+	pimeloyl-CoA dehydrogenase small subunit	NA	NA	NA	NA
WP_168788660.1\|2061436_2062186_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA
WP_168788661.1\|2062213_2063149_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_168789096.1\|2063450_2063708_-\|transposase	transposase	NA	NA	NA	NA
WP_168788662.1\|2064824_2064995_-	hypothetical protein	NA	NA	NA	NA
WP_168787361.1\|2066708_2067686_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168788663.1\|2068480_2069473_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788664.1\|2069598_2070372_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	6.9e-07	25.2
WP_168789097.1\|2070411_2071257_-	oxidoreductase	NA	NA	NA	NA
WP_168787491.1\|2071855_2072878_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	7.6e-38	34.0
WP_168788665.1\|2075573_2076113_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_168788666.1\|2076127_2077063_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168788667.1\|2077229_2078276_+	gentisate 1,2-dioxygenase	NA	NA	NA	NA
WP_168788668.1\|2078348_2079047_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA
WP_168788669.1\|2079080_2079722_+	maleylacetoacetate isomerase	NA	NA	NA	NA
WP_168788670.1\|2081117_2082188_-	porin	NA	NA	NA	NA
WP_168788671.1\|2082338_2083361_-	ABC transporter permease	NA	NA	NA	NA
WP_168788672.1\|2083357_2085835_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	2.4e-13	28.6
WP_168788673.1\|2085850_2087074_-	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_168788674.1\|2087555_2087840_+	DUF4148 domain-containing protein	NA	NA	NA	NA
WP_168789098.1\|2087942_2088365_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_168789099.1\|2088803_2089748_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_168788675.1\|2089981_2091031_+	homogentisate 1,2-dioxygenase	NA	NA	NA	NA
WP_168788676.1\|2091051_2091561_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_168788677.1\|2091612_2092722_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_168788678.1\|2092936_2094295_+	MFS transporter	NA	NA	NA	NA
WP_168788679.1\|2094454_2094835_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_168789100.1\|2096030_2096579_-	SDR family oxidoreductase	A0A0M4JSW6	Mollivirus	4.1e-06	35.6
WP_168788680.1\|2096591_2096855_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_168788681.1\|2097013_2098105_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_168788682.1\|2098287_2098914_+	hypothetical protein	NA	NA	NA	NA
WP_168788683.1\|2099201_2100641_+\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_168788684.1\|2101989_2102370_+	hypothetical protein	NA	NA	NA	NA
WP_168788685.1\|2102636_2103152_+	carboxylesterase family protein	A0A0M4JT58	Mollivirus	1.5e-13	48.8
WP_168788686.1\|2103418_2104207_+	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_168788687.1\|2104295_2106059_+	GMC family oxidoreductase	NA	NA	NA	NA
WP_168788688.1\|2106535_2107627_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_168788689.1\|2109245_2110379_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168788690.1\|2111585_2112248_+	hypothetical protein	NA	NA	NA	NA
WP_168788691.1\|2112917_2113055_-	hypothetical protein	NA	NA	NA	NA
WP_168788692.1\|2113252_2113537_+	hypothetical protein	NA	NA	NA	NA
WP_168788693.1\|2114000_2115473_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_168788694.1\|2117724_2118480_+	hypothetical protein	NA	NA	NA	NA
WP_168787994.1\|2118589_2120020_+\|transposase	IS1182 family transposase	NA	NA	NA	NA

DBSCAN-SWA_17

2128932 : 2165876

Salmonella_phage(14.29%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168788697.1\|2128932_2129235_+\|transposase	transposase	A0A1B0V7H9	Salmonella_phage	4.9e-25	61.8
WP_168788698.1\|2129538_2129850_-	DUF3579 domain-containing protein	NA	NA	NA	NA
WP_168788699.1\|2129870_2130110_+	hypothetical protein	NA	NA	NA	NA
WP_168788700.1\|2130299_2131313_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788701.1\|2131402_2132200_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-31	36.8
WP_168789101.1\|2132244_2133087_+	ABC transporter permease	NA	NA	NA	NA
WP_168787361.1\|2133928_2134906_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	2.6e-80	49.8
WP_168788702.1\|2135738_2136413_+	response regulator	B5LWA6	Feldmannia_species_virus	3.0e-06	28.3
WP_168788703.1\|2136607_2137735_+	porin	NA	NA	NA	NA
WP_168788704.1\|2137846_2139586_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	5.5e-12	38.0
WP_168788705.1\|2140552_2140924_+	DNA-binding protein	NA	NA	NA	NA
WP_168788706.1\|2140920_2141439_+	RES family NAD+ phosphorylase	NA	NA	NA	NA
WP_168788093.1\|2142224_2142476_-	hypothetical protein	NA	NA	NA	NA
WP_168788092.1\|2142572_2144210_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_168789021.1\|2144303_2145269_-	hypothetical protein	NA	NA	NA	NA
WP_168788091.1\|2145480_2146932_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	4.5e-76	36.5
WP_168788090.1\|2147214_2148165_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_168788089.1\|2148268_2149306_-	ribose ABC transporter permease	NA	NA	NA	NA
WP_168788088.1\|2149347_2150898_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	6.2e-15	27.7
WP_168788707.1\|2150884_2152135_-	ROK family protein	NA	NA	NA	NA
WP_168788708.1\|2152591_2153050_-	hypothetical protein	NA	NA	NA	NA
WP_168788709.1\|2155595_2155868_-\|transposase	transposase	NA	NA	NA	NA
WP_168787985.1\|2156905_2157922_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788343.1\|2158399_2159419_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788710.1\|2160119_2160566_-	VOC family protein	NA	NA	NA	NA
WP_168788711.1\|2160684_2161245_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_168789102.1\|2161757_2162819_+	asparaginase	NA	NA	NA	NA
WP_168787994.1\|2163095_2164526_-\|transposase	IS1182 family transposase	NA	NA	NA	NA
WP_168788712.1\|2164853_2165876_-\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_18

2216850 : 2248631

Mycobacterium_phage(50.0%)

integrase,transposase

attL 2216721:2216746|attR 2223626:2223651

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2216721:2216746	attL	NA	NA	NA	NA
WP_168787614.1\|2216850_2218089_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VF00	Mycobacterium_phage	2.2e-07	30.1
WP_168787615.1\|2218085_2219030_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788487.1\|2219026_2219698_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787993.1\|2219698_2220715_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787992.1\|2220707_2221655_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787991.1\|2221651_2222911_-\|integrase	tyrosine-type recombinase/integrase	R4TQT9	Mycobacterium_phage	1.6e-05	27.4
WP_168788485.1\|2223090_2223534_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168788750.1\|2224933_2226271_+	group II intron reverse transcriptase/maturase	A0A0U4J920	Pseudomonas_phage	2.5e-36	31.4
2223626:2223651	attR	NA	NA	NA	NA
WP_168788689.1\|2226422_2227556_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168787739.1\|2227766_2228578_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_168787740.1\|2228730_2230026_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168788751.1\|2230469_2231345_+	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA
WP_168788752.1\|2231588_2231942_+	BON domain-containing protein	NA	NA	NA	NA
WP_168788753.1\|2232068_2233880_-	PAS domain S-box protein	NA	NA	NA	NA
WP_168788754.1\|2235453_2235765_-	High potential iron-sulfur protein	NA	NA	NA	NA
WP_168788755.1\|2235850_2236201_-	cytochrome c	NA	NA	NA	NA
WP_168789104.1\|2236211_2237450_-	molybdopterin-dependent oxidoreductase	NA	NA	NA	NA
WP_168788756.1\|2237737_2238622_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_168788757.1\|2238646_2239735_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA
WP_168788758.1\|2241241_2242819_-	DUF3459 domain-containing protein	NA	NA	NA	NA
WP_168788759.1\|2242867_2244532_+	trehalose synthase	NA	NA	NA	NA
WP_168788760.1\|2245159_2246482_-\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168788399.1\|2246681_2247635_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	8.2e-119	67.5
WP_168787739.1\|2247820_2248631_+\|transposase	IS5 family transposase	NA	NA	NA	NA

DBSCAN-SWA_19

2277654 : 2340157

Escherichia_phage(14.29%)

integrase,transposase

attL 2323052:2323111|attR 2349424:2350952

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787653.1\|2277654_2279133_+\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_168788955.1\|2279143_2279911_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	6.7e-47	41.6
WP_168788776.1\|2280120_2280933_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_168788777.1\|2284018_2284723_+	type IV secretion system protein	NA	NA	NA	NA
WP_168788778.1\|2284719_2285589_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_168788779.1\|2285621_2286674_-\|transposase	transposase	I4AZM3	Saccharomonospora_phage	3.5e-30	39.3
WP_168788780.1\|2286763_2288053_+	TrbI/VirB10 family protein	NA	NA	NA	NA
WP_168788781.1\|2288045_2288867_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_168788782.1\|2289085_2290108_+	hypothetical protein	NA	NA	NA	NA
WP_168788783.1\|2290104_2290572_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_168789105.1\|2291045_2291360_+	hypothetical protein	NA	NA	NA	NA
WP_168788784.1\|2291356_2293078_+	pilus assembly protein PilN	NA	NA	NA	NA
WP_168788785.1\|2293205_2293583_+	type IV pilus biogenesis protein PilP	NA	NA	NA	NA
WP_168788786.1\|2293586_2295305_+	type 4b pilus protein PilO2	NA	NA	NA	NA
WP_168788787.1\|2295313_2297224_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_168788788.1\|2297227_2298268_+	type II secretion system protein	NA	NA	NA	NA
WP_168788789.1\|2298552_2299056_+	prepilin type IV pili	NA	NA	NA	NA
WP_168788790.1\|2299074_2300187_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_168788791.1\|2300188_2300668_+	hypothetical protein	NA	NA	NA	NA
WP_168788792.1\|2300677_2301964_+	shufflon system plasmid conjugative transfer pilus tip adhesin PilV	NA	NA	NA	NA
WP_168788793.1\|2301976_2302588_+	hypothetical protein	NA	NA	NA	NA
WP_168788794.1\|2302757_2303777_-	CAP domain-containing protein	NA	NA	NA	NA
WP_168788795.1\|2304073_2304436_-	hypothetical protein	NA	NA	NA	NA
WP_168788796.1\|2304475_2304628_-	hypothetical protein	NA	NA	NA	NA
WP_168788797.1\|2304656_2305853_-	hypothetical protein	NA	NA	NA	NA
WP_168788798.1\|2305883_2307164_-	hypothetical protein	NA	NA	NA	NA
WP_168788799.1\|2307391_2308075_-	NERD domain-containing protein	NA	NA	NA	NA
WP_168788800.1\|2308768_2309152_+	hypothetical protein	NA	NA	NA	NA
WP_168788801.1\|2309256_2309691_+	hypothetical protein	NA	NA	NA	NA
WP_168788802.1\|2309699_2310515_+	hypothetical protein	NA	NA	NA	NA
WP_168789106.1\|2310529_2311105_+	single-stranded DNA-binding protein	I6NRL7	Burkholderia_virus	3.4e-51	64.2
WP_168788803.1\|2311379_2312495_+	zinc-binding protein	Q7M2A8	Enterobacteria_phage	1.3e-09	37.2
WP_168788804.1\|2312590_2312806_+	hypothetical protein	NA	NA	NA	NA
WP_168788805.1\|2312941_2313133_-	hypothetical protein	NA	NA	NA	NA
WP_168788806.1\|2313246_2313564_-	hypothetical protein	NA	NA	NA	NA
WP_168788807.1\|2313590_2314592_-	PRTRC system protein D	NA	NA	NA	NA
WP_168788808.1\|2315762_2316932_+	Fis family transcriptional regulator	NA	NA	NA	NA
WP_168788809.1\|2317025_2317673_-	hypothetical protein	NA	NA	NA	NA
WP_168788810.1\|2318151_2318391_-	hypothetical protein	NA	NA	NA	NA
WP_168788811.1\|2318512_2319019_-	hypothetical protein	NA	NA	NA	NA
WP_168788812.1\|2319083_2319296_-	hypothetical protein	NA	NA	NA	NA
WP_168788813.1\|2319617_2319851_+	hypothetical protein	NA	NA	NA	NA
WP_168788814.1\|2320030_2320528_-	hypothetical protein	NA	NA	NA	NA
WP_168788815.1\|2320675_2321005_-	hypothetical protein	NA	NA	NA	NA
WP_168788816.1\|2321521_2321755_-	hypothetical protein	NA	NA	NA	NA
2323052:2323111	attL	NA	NA	NA	NA
WP_168787386.1\|2323276_2324308_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788817.1\|2325999_2326416_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_168787335.1\|2329280_2329433_-	hypothetical protein	NA	NA	NA	NA
WP_168788818.1\|2329413_2329674_-	hypothetical protein	NA	NA	NA	NA
WP_168789004.1\|2329969_2330401_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787991.1\|2330595_2331855_+\|integrase	tyrosine-type recombinase/integrase	R4TQT9	Mycobacterium_phage	1.6e-05	27.4
WP_168787992.1\|2331851_2332799_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787993.1\|2332791_2333808_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168788819.1\|2334813_2335812_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_168787487.1\|2335808_2336744_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_168787486.1\|2336740_2337985_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	1.3e-07	27.7
WP_168788820.1\|2338903_2340157_-\|integrase	tyrosine-type recombinase/integrase	D6PIF1	uncultured_phage	9.4e-06	26.0
2349424:2350952	attR	NA	NA	NA	NA

DBSCAN-SWA_20

2362521 : 2425384

Salmonella_phage(28.57%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168787774.1\|2362521_2363748_+\|transposase	ISL3 family transposase	NA	NA	NA	NA
WP_168788841.1\|2363786_2363948_+	PRTRC system protein C	NA	NA	NA	NA
WP_168788842.1\|2363940_2364156_+	hypothetical protein	NA	NA	NA	NA
WP_168788843.1\|2364167_2365175_+	PRTRC system protein F	NA	NA	NA	NA
WP_168788844.1\|2365193_2365916_+	PRTRC system protein B	NA	NA	NA	NA
WP_168788845.1\|2365912_2366551_+	PRTRC system protein A	NA	NA	NA	NA
WP_168788846.1\|2366550_2367357_+	PRTRC system ThiF family protein	NA	NA	NA	NA
WP_168788847.1\|2367353_2367560_+	hypothetical protein	NA	NA	NA	NA
WP_168788848.1\|2367597_2367891_+	hypothetical protein	NA	NA	NA	NA
WP_168788849.1\|2367994_2369080_+	hypothetical protein	NA	NA	NA	NA
WP_168788850.1\|2369579_2370053_+	hypothetical protein	NA	NA	NA	NA
WP_168789108.1\|2370142_2370535_+	hypothetical protein	NA	NA	NA	NA
WP_168788851.1\|2370543_2371026_+	hypothetical protein	NA	NA	NA	NA
WP_168788852.1\|2371636_2372122_+	hypothetical protein	NA	NA	NA	NA
WP_168788853.1\|2372575_2372902_+	hypothetical protein	NA	NA	NA	NA
WP_168788854.1\|2373028_2373400_+	hypothetical protein	NA	NA	NA	NA
WP_168788855.1\|2373705_2374248_+	SET domain-containing protein-lysine N-methyltransferase	NA	NA	NA	NA
WP_168787617.1\|2375672_2376980_+	group II intron reverse transcriptase/maturase	H7BVN0	unidentified_phage	1.5e-09	24.9
WP_168788856.1\|2377358_2377589_-	hypothetical protein	NA	NA	NA	NA
WP_168789109.1\|2378657_2379716_+	ATP-binding protein	E9NIF8	Enterobacter_phage	3.7e-27	31.0
WP_168789110.1\|2379826_2380756_+	hypothetical protein	NA	NA	NA	NA
WP_168788857.1\|2380763_2382050_+	hypothetical protein	M4SNG8	Pseudoalteromonas_phage	2.5e-30	25.3
WP_168788858.1\|2382344_2383400_+	CpaF family protein	NA	NA	NA	NA
WP_168788859.1\|2383413_2383779_+	conjugal transfer protein TrbC	NA	NA	NA	NA
WP_168788860.1\|2383788_2384109_+	conjugal transfer protein	NA	NA	NA	NA
WP_168788861.1\|2384122_2386591_+	type IV secretion system protein VirB4	NA	NA	NA	NA
WP_168788862.1\|2386601_2387357_+	DUF4141 domain-containing protein	NA	NA	NA	NA
WP_168788863.1\|2387393_2388455_+	type IV secretion system protein	NA	NA	NA	NA
WP_168788864.1\|2388527_2389718_+	hypothetical protein	NA	NA	NA	NA
WP_168788865.1\|2389810_2391013_+	type VI secretion protein	NA	NA	NA	NA
WP_168788866.1\|2391009_2392878_+	conjugative transfer system coupling protein TraD	NA	NA	NA	NA
WP_168788867.1\|2392883_2393402_+	hypothetical protein	NA	NA	NA	NA
WP_168788868.1\|2393358_2393619_+	hypothetical protein	NA	NA	NA	NA
WP_168788869.1\|2393611_2394214_+	DUF4400 domain-containing protein	NA	NA	NA	NA
WP_168788870.1\|2395406_2395727_-	hypothetical protein	NA	NA	NA	NA
WP_168788871.1\|2395935_2396844_+	ATPase	NA	NA	NA	NA
WP_168788872.1\|2396849_2398580_+	ATP-dependent helicase	S5M596	Bacillus_phage	1.2e-30	25.0
WP_168788873.1\|2398693_2398876_+	hypothetical protein	NA	NA	NA	NA
WP_168788874.1\|2399016_2399187_+	hypothetical protein	NA	NA	NA	NA
WP_168788875.1\|2399560_2400079_-	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_168788876.1\|2400231_2401290_-	hypothetical protein	NA	NA	NA	NA
WP_168788877.1\|2401367_2401961_-	DUF1845 domain-containing protein	NA	NA	NA	NA
WP_168788878.1\|2402701_2404099_+	hypothetical protein	NA	NA	NA	NA
WP_168788879.1\|2404387_2405746_+	metallophosphatase family protein	NA	NA	NA	NA
WP_168788880.1\|2405826_2406363_+	hypothetical protein	NA	NA	NA	NA
WP_168788881.1\|2406350_2408672_+	SMC family ATPase	NA	NA	NA	NA
WP_168787386.1\|2409080_2410112_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168789111.1\|2410500_2411058_+	hypothetical protein	A0A1B2LRT6	Wolbachia_phage	2.8e-10	42.3
WP_168788882.1\|2411032_2411392_-	hypothetical protein	NA	NA	NA	NA
WP_168788883.1\|2413274_2413520_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_168788884.1\|2413516_2413915_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_168788885.1\|2414177_2415392_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	5.2e-118	54.0
WP_168788886.1\|2415630_2417013_-	hypothetical protein	NA	NA	NA	NA
WP_168788887.1\|2417603_2417888_+	CopG family transcriptional regulator	NA	NA	NA	NA
WP_168788888.1\|2417875_2418178_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_168787386.1\|2421244_2422276_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_168788949.1\|2422338_2423649_-\|transposase	transposase	A0A1B0VCD8	Salmonella_phage	5.2e-116	53.9
WP_168788889.1\|2424001_2425384_+\|transposase	IS4 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP051515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051515_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051515_1

2831343-2831415

Orphan

Consensus_repeat	Method
CTTACTCTGGTCCCATGCAAAGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051515_1

>merge|NZ_CP051515|1|2831343-2831415|CRISPRCasFinder
CTTACTCTGGTCCCATGCAAAGCTGTCGACCAGAGTTGGCGCTTTAGCGCTTACTCTGGTCCCATGCAAAGCT

>NZ_CP051515|1|1|2831343-2831415|CRISPRCasFinder
CTTACTCTGGTCCCATGCAAAGCT	GTCGACCAGAGTTGGCGCTTTAGCG
CTTACTCTGGTCCCATGCAAAGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051515.1\|WP_168791371.1\|2840773_2841583_-\|enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|181174
NZ_CP051515.1\|WP_168791361.1\|2827715_2830196_-\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|223964
NZ_CP051515.1\|WP_168791364.1\|2833157_2833961_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236110
NZ_CP051515.1\|WP_168791368.1\|2837296_2838448_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|181123
NZ_CP051515.1\|WP_168791363.1\|2831426_2832632_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180843
NZ_CP051515.1\|WP_168791355.1\|2820478_2821858_+\|DUF1329-domain-containing-protein	unknown	unknown	gnl\|CDD\|377764
NZ_CP051515.1\|WP_168791357.1\|2822755_2823655_+\|acetaldehyde-dehydrogenase-(acetylating)	unknown	unknown	gnl\|CDD\|236227
NZ_CP051515.1\|WP_168792139.1\|2832663_2833158_-\|MaoC-family-dehydratase	unknown	unknown	gnl\|CDD\|239534
NZ_CP051515.1\|WP_168791353.1\|2817781_2818693_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236116
NZ_CP051515.1\|WP_168791362.1\|2830305_2831304_-\|sialidase	unknown	unknown	gnl\|CDD\|226855
NZ_CP051515.1\|WP_168791356.1\|2821938_2822721_+\|2-oxopent-4-enoate-hydratase	unknown	unknown	gnl\|CDD\|132264
NZ_CP051515.1\|WP_168791358.1\|2823665_2824694_+\|4-hydroxy-2-oxovalerate-aldolase	unknown	unknown	gnl\|CDD\|181282
NZ_CP051515.1\|WP_168791359.1\|2825487_2826429_+\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|379135
NZ_CP051515.1\|WP_168791366.1\|2835150_2836389_-\|acyl-CoA/acyl-ACP-dehydrogenase	unknown	unknown	gnl\|CDD\|224871
NZ_CP051515.1\|WP_168791369.1\|2838444_2839509_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173838
NZ_CP051515.1\|WP_168791354.1\|2818804_2820379_+\|DUF1302-domain-containing-protein	unknown	unknown	gnl\|CDD\|377751
NZ_CP051515.1\|WP_168791365.1\|2833957_2835151_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP051515.1\|WP_168791370.1\|2839595_2840777_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173841
NZ_CP051515.1\|WP_168791360.1\|2826485_2827562_-\|Rieske-2Fe-2S-domain-containing-protein	unknown	unknown	gnl\|CDD\|239607
NZ_CP051515.1\|WP_168791367.1\|2836393_2837269_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|236099

Protein	Function_ID	Function_description	E-value
NZ_CP051515.1\|WP_168791371.1\|2840773_2841583_-\|enoyl-CoA-hydratase-family-protein	gnl\|CDD\|181174	PRK07938, PRK07938, enoyl-CoA hydratase family protein.	1.88781e-148
NZ_CP051515.1\|WP_168791361.1\|2827715_2830196_-\|MMPL-family-transporter	gnl\|CDD\|223964	COG1033, COG1033, Predicted exporters of the RND superfamily [General function prediction only].	3.68081e-77
NZ_CP051515.1\|WP_168791364.1\|2833157_2833961_-\|SDR-family-oxidoreductase	gnl\|CDD\|236110	PRK07831, PRK07831, SDR family oxidoreductase.	5.57187e-163
NZ_CP051515.1\|WP_168791368.1\|2837296_2838448_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|181123	PRK07801, PRK07801, acetyl-CoA C-acetyltransferase.	0
NZ_CP051515.1\|WP_168791363.1\|2831426_2832632_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180843	PRK07108, PRK07108, acetyl-CoA C-acyltransferase.	0
NZ_CP051515.1\|WP_168791355.1\|2820478_2821858_+\|DUF1329-domain-containing-protein	gnl\|CDD\|377764	pfam07044, DUF1329, Protein of unknown function (DUF1329). This family consists of several hypothetical bacterial proteins of around 475 residues in length. The majority of family members are from Pseudomonas species but the family also contains sequences from Shewanella oneidensis and Thauera aromatica.	8.75911e-149
NZ_CP051515.1\|WP_168791357.1\|2822755_2823655_+\|acetaldehyde-dehydrogenase-(acetylating)	gnl\|CDD\|236227	PRK08300, PRK08300, acetaldehyde dehydrogenase; Validated.	0
NZ_CP051515.1\|WP_168792139.1\|2832663_2833158_-\|MaoC-family-dehydratase	gnl\|CDD\|239534	cd03450, NodN, NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.	5.13001e-83
NZ_CP051515.1\|WP_168791353.1\|2817781_2818693_+\|SDR-family-oxidoreductase	gnl\|CDD\|236116	PRK07856, PRK07856, SDR family oxidoreductase.	5.99023e-122
NZ_CP051515.1\|WP_168791362.1\|2830305_2831304_-\|sialidase	gnl\|CDD\|226855	COG4447, COG4447, Uncharacterized protein related to plant photosystem II stability/assembly factor [General function prediction only].	1.76982e-27
NZ_CP051515.1\|WP_168791356.1\|2821938_2822721_+\|2-oxopent-4-enoate-hydratase	gnl\|CDD\|132264	TIGR03220, 2-hydroxypenta-24-dienoate_hydratase, 2-oxopent-4-enoate hydratase. Members of this protein family are 2-oxopent-4-enoate hydratase, which is also called 2-hydroxypent-2,4-dienoate hydratase. It is closely related to another gene found in the same operon, 4-oxalocrotonate decarboxylase, with which it interacts closely.	4.81793e-147
NZ_CP051515.1\|WP_168791358.1\|2823665_2824694_+\|4-hydroxy-2-oxovalerate-aldolase	gnl\|CDD\|181282	PRK08195, PRK08195, 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase,; Validated.	0
NZ_CP051515.1\|WP_168791359.1\|2825487_2826429_+\|tyrosine-protein-phosphatase	gnl\|CDD\|379135	pfam13350, Y_phosphatase3, Tyrosine phosphatase family. This family is closely related to the pfam00102 and pfam00782 families.	1.33186e-74
NZ_CP051515.1\|WP_168791366.1\|2835150_2836389_-\|acyl-CoA/acyl-ACP-dehydrogenase	gnl\|CDD\|224871	COG1960, CaiA, Acyl-CoA dehydrogenases [Lipid metabolism].	2.26984e-45
NZ_CP051515.1\|WP_168791369.1\|2838444_2839509_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173838	cd00567, ACAD, Acyl-CoA dehydrogenase. Both mitochondrial acyl-CoA dehydrogenases (ACAD) and peroxisomal acyl-CoA oxidases (AXO) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. In contrast, AXO catalyzes a different oxidative half-reaction, in which the reduced FAD is reoxidized by molecular oxygen. The ACAD family includes the eukaryotic beta-oxidation enzymes, short (SCAD), medium (MCAD), long (LCAD) and very-long (VLCAD) chain acyl-CoA dehydrogenases. These enzymes all share high sequence similarity, but differ in their substrate specificities. The ACAD family also includes amino acid catabolism enzymes such as Isovaleryl-CoA dehydrogenase (IVD), short/branched chain acyl-CoA dehydrogenases(SBCAD), Isobutyryl-CoA dehydrogenase (IBDH), glutaryl-CoA deydrogenase (GCD) and Crotonobetainyl-CoA dehydrogenase. The mitochondrial ACAD's are generally homotetramers, except for VLCAD, which is a homodimer. Related enzymes include the SOS adaptive reponse proten aidB, Naphthocyclinone hydroxylase (NcnH), and and Dibenzothiophene (DBT) desulfurization enzyme C (DszC).	1.42288e-29
NZ_CP051515.1\|WP_168791354.1\|2818804_2820379_+\|DUF1302-domain-containing-protein	gnl\|CDD\|377751	pfam06980, DUF1302, Protein of unknown function (DUF1302). This family contains a number of hypothetical bacterial proteins of unknown function that are approximately 600 residues long. Most family members seem to be from Pseudomonas.	4.94789e-110
NZ_CP051515.1\|WP_168791365.1\|2833957_2835151_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	1.15346e-123
NZ_CP051515.1\|WP_168791370.1\|2839595_2840777_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173841	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26. Putative acyl-CoA dehydrogenases (ACAD). Mitochondrial acyl-CoA dehydrogenases (ACAD) catalyze the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. The mitochondrial ACD's are generally homotetramers and have an active site glutamate at a conserved position.	3.61061e-148
NZ_CP051515.1\|WP_168791360.1\|2826485_2827562_-\|Rieske-2Fe-2S-domain-containing-protein	gnl\|CDD\|239607	cd03531, Rieske_RO_Alpha_KSH, The alignment model represents the N-terminal rieske iron-sulfur domain of KshA, the oxygenase component of 3-ketosteroid 9-alpha-hydroxylase (KSH). The terminal oxygenase component of KSH is a key enzyme in the microbial steroid degradation pathway, catalyzing the 9 alpha-hydroxylation of 4-androstene-3,17-dione (AD) and 1,4-androstadiene-3,17-dione (ADD). KSH is a two-component class IA monooxygenase, with terminal oxygenase (KshA) and oxygenase reductase (KshB) components. KSH activity has been found in many actino- and proteo- bacterial genera including Rhodococcus, Nocardia, Arthrobacter, Mycobacterium, and Burkholderia.	1.6385e-68
NZ_CP051515.1\|WP_168791367.1\|2836393_2837269_-\|SDR-family-oxidoreductase	gnl\|CDD\|236099	PRK07791, PRK07791, short chain dehydrogenase; Provisional.	3.52819e-151

>NZ_CP051515.1|WP_168791362.1|2830305_2831304_-|sialidase
MKSTLPGLLLSVAVLGAALFAFSPRPVPAFAATAIEANHLQINGLAKAGTGLVAVGERGVILLSGDAGASWRQAAVTPNEASALTQVFFISPRIGIAVGHDGWIVRTVDGGAHWSEVRFDHKHSDPLLSVWGNADGLVFVTGSFGQLFVSHDAGATWTQQKTPADDRHLNVIAGDAGGLVMIAGETGTLLRSTDYGATWEKRPVPYQGSLFGVLKLADGDWLAYGMRGNVLRSIDQGETWTHVDSRVGTSYFGAVQLADGELVLVGQGGAIVTSRDGGLTYTVRKVGGVQSLAAVVDAGHGELALGGEAGVALLPVTAPPRAVQAANGAPSS
>NZ_CP051515.1|WP_168791361.1|2827715_2830196_-|MMPL-family-transporter
MNAPSHPSSSHSSSRLSRFVERCADAIMRHRRILLTLCLALTVALGCSATRLRLDPGFNKMIPMQHPYMQVFNRYASAFPGANTILVSLRWKGHGDIYNQAFMDDLRHATDDVFFIPGVNRSRVFSLFTPNVRYTEVTEAGFRGDVVVPGQFSSANPTDLATVRRNVARSGQIGRLVGNDLHSALIRAELRETDPATGKHLDYSAVARQLEEIRARYSNQDVEVDIIGFAKLVGDVEAGISGVIGFFALAFLITAALLLLYTRSAKTTALALFVALLPVVWLLGALPILGLGIDPMSILVPFLIFSIGVSHAVQMTNAWKQALVAGMSSVDAARDAFRKLFVPGTVALLTNALGFMVIMRIQIEIVRELGVTACLGVLLMIVTNKVFLPILLSYTRLETATLARAQRRAAAGGSRLWTRFAVFARPAPALGVFAVALLLLAFGAKASRDLQIGDIGSGAPELRAASLYNLDNARITSEYNIGVDALSVIVETTGFDDACLHYPVMSAIERFEMEMRGVAGVQSVVSVPSLAKISIAAFNEGNPRWGALPRSSDGLTQGANAFDPDNGMNTANCQVIQVLIYTANHEGKTIAHIVDEIKRLAAQDHTPNVAFRLAGGNVGVMAATNEAVGDAEVAMLLSIFGAIALLCVVTFRSWRAVLCIVVPLTVVSILCNAVMAWLGIGLKVATLPVITLGVGVGVDYGIYLYERLQHELRGGASLPDAFAAAMRQRGTAALFTAVTMFIGVGTWAFSALKFQVDMGVLLAFMFLVNLFGAVFLLPALAAWLGVERVERRAGGAMVAPSAPAHGVAMSTKTAQAATLEHGNSAR
>NZ_CP051515.1|WP_168791360.1|2826485_2827562_-|Rieske-2Fe-2S-domain-containing-protein
MSARPYKIEAQPLVQRYARGWHCLGLASEYKDGQPHTLNIFGQRLAAFMDSHGRVNVVDGFCPHMGADLSTGRVDGDTLVCPFHGWQWGGDGNCQSIPYCKRIPPKAKIGTWQTCEENQLLFIWHDPEGNPPGDEVAIPQIDACFSDEWSDWVIDRMVIGTNCRELVDNISDMAHFATVHGAPVDYFANLFEGHKATQLLVGRSERLGDDELIALSTYFGPAYHITEMTGKSGGHPIHSILLNCHVPIDMHSFELRYGVMVKKVPGLSGEQNMEIARTYSKQAQAAFYEDVAIWDTKTRIDNPLLCEGDGPLYQMRDWYSQFYLDSADVRPSSTAKKVVEIKVREGGTPPPLRHVFEG
>NZ_CP051515.1|WP_168791359.1|2825487_2826429_+|tyrosine-protein-phosphatase
MPPRTGATLIDHYEFKERQKGQKTKRPTPINRQTDKKMLKSITVTTLLIASTLPATAQTPWTTDHYIPLEKVQNTRDLSGIETRDSRRINPYRLYRSGNPSSASPADIEKLKSLHLDVIVDFRAASEKKPTEQSFAEQFPYQADPVLAGNLAPESIIPMLKRSTPAQMHDFMVSLYKQFPEKYQPQFTRFLKLAEDNRTILYHCTAGKDRTGFATVLLLSALGVDRATTIANYLESNHYNAAANAQATTQLEKIGVAPDVLAPLLAVDPNYIGAAMEVIDQQYGGMQHYLVDVLHVNVDKIRANYLSATEQPS
>NZ_CP051515.1|WP_168791358.1|2823665_2824694_+|4-hydroxy-2-oxovalerate-aldolase
MSLEGTRITVHDMTLRDGMHPKRHQISLEQMRTIARGLDAAGVPLIEVTHGDGLGGASVNYGFPAHTDEAYLSAVLAELKQAKVSALLIPGIGTVDHLRMAHGLGVQTIRVATHCTEADVSEQHIGLARKLEMDTVGFLMMAHMAPPEQLVEQARLMESYGANCIYVTDSAGYMLPDDVTARIACVRDALKPETELGFHGHHNLAMGVANSIAAVAAGANRIDAAAGGLGAGAGNTPMEVFVAVCERMGIQTGVDVFSISDVAEDLVVPIMDAPIRIDRDALTLGYAGVYSSFLLFAKRAEVKYGVAARDILVELGRQRLVGGQEDMIEDTALSIVKGRVAA
>NZ_CP051515.1|WP_168791357.1|2822755_2823655_+|acetaldehyde-dehydrogenase-(acetylating)
MSKIKCALIGPGNIGTDLLYKLRRSAVLEPVWMVGVDAASEGLARARELGLKTTAEGIDGLLPHLAADDIRIAFDATSAYVHREHSDKLTARGVRVIDLTPAAIGPFCVPPVNLAAQNDQQVMNVNMVTCGGQATIPMVYAVSRVQRVAYGEIVATVSSRSVGPGTRKNIDEFTRTTSLAIEQIGGAAVGKAIIVINPAEPPLIMRDTIHCLTEGDPDIDAITASVHAMVDEVRQYVPGYTLKNGPVFDGRRVSVFMEVEGLGDYLPKYAGNLDIMTAAAARTAEVFAQQMLAASPVTA
>NZ_CP051515.1|WP_168791356.1|2821938_2822721_+|2-oxopent-4-enoate-hydratase
MTSTHHAELGDTLYCAWLDRTPVAPFSARADGLPLADAYRVQQHFIARRLAAGETVVGKKIGVTSQVVQDMLDVRQPDFGVLLSGMHYAAGQAIPIDTLIQPRAEGEIAFYLQRDLRGPGVTREDVLAATGSVGACFEIVDSRIRDWAIRIGDTVADNASCGVYVLGHERVPPDALDLAACRMTLDKNGERVAEGIGAAALGHPADAVAWLANTLGELGMPLLASEVVLSGSLAALIPVIRGDVLEMHIEGIGGCSVRFV
>NZ_CP051515.1|WP_168791355.1|2820478_2821858_+|DUF1329-domain-containing-protein
MSRIFNPALRVCVFAAGAALAAASFAKTSPEDIAKLEGPLTPMGAERAANADGTIPAWSGKWFGTPPGVDYKQGQRFPDPYASEKPLFVITAQNMQQYEARLTDGEKALLKKYPDTFKIPVYPSHRDFSYGDAVYKDIRLYAPTTTMTKDQNGLKEFPPVTPFPVPKNGVEAMWNLRFASAIEGETATYDQAVVYPDGNIAWGKVQYAIYGPRSADRFDPKSALNSKSFFRQTTMLPLSDRGTIITGFEMWDQEGSDTRRTWSYNPGTRRVRQAPEFGFDQPEGPGGFRTVDDDRLFNGSGERYDWKIIGKREVYVPYDNYKLMDPSIKYTDLLTKGHENMQYMRFELHRVWVLQATLKSGYRHQYAKRVLYLDEDTWNAVAADNYDARGTLWRTNFAPTLYAFDAKTFYSTAVFYHDLISGAYYADRLVNQEPMPVLTRGSQLTEAYFSPDAIRGAGN
>NZ_CP051515.1|WP_168791354.1|2818804_2820379_+|DUF1302-domain-containing-protein
MQINGTRERAPAMRALCTACKLAMLAAATLNMAPAHAGDTLNLGADTTLDYTFTLGYGLGMRTRAPSGNLLTPENINGDDGDRNFAKNKLIQNQVSLLGEVNLKHDDWGVFVRADTFYDQAYQHPNYNDAPGTVNHGGVFNNFTEQANYWAGGRTQLLAAYVYNTFKLGGTSLNVKVGDQVVAWGESVFFPNIAGAQGPADATKSFVAGAEVKDILLPVPQISTQWQIAPNFSLLGYYQFSFQPNQLSAPGSYMSYSDVVGPGAEYIIGPGGIHIPRGDDIRPGNSGQWGLGARWRVFGDTEIGAYYLHYNDMNPSVVTTYFPTLGYQQKYFDNIKLSGLSFSTDLNGVNVAGETSYRQGAAVLVNTAAGAQTTRGDIWQSNLSAIYSIGPTFLAASQTLVGEVSYVHAGNVTPLLGSSTLANTRNSAAFEVAWTLSYKNVFSGWDVDVPITYADDFTGKSALAGALGSMTGVGDHRVTVGVNFTRLSNLKLALVYAKFLGRPDPTNRPLADRDYVLATATYSF
>NZ_CP051515.1|WP_168791353.1|2817781_2818693_+|SDR-family-oxidoreductase
MTGFDFSGKVVLVTGGTKGIGAGIAQAFVAAGATVYVCGRTPPENAASGSPERRDPRDERSGSSRDDAPRNPSAHAPNPTPRFIAADVRDIDAIDTMLARIERETGRLDIVVNNAGGAPFALAADASPRFTEAVIRLNLLAPLQLAQRANALMQRQRDGGVLLFIGSVSGLRASPGTAAYGAAKAGLLNAVRSLAVEWAPKVRVCAVSPSLVETETATSGHTGSSKSDAQDTALASIEATIPAGRLAQPADIASACLFLASPHAAYASGSNLILEGGGEVPAFLAATGQHQAFAAKSEEPARH
>NZ_CP051515.1|WP_168791363.1|2831426_2832632_-|acetyl-CoA-C-acyltransferase
MNEAVIVSVARTPIGKAYRGVFNDTEAPALGGHVVRAALERAQLEGAEIDDVLMGCAAQQGTQGYNIGRLSAAAAGLPASVPGMAMDRMCSSGLMTIATAAQNILCGDARIVIAGGVESITLTQNKHKNAYRARSNAVLANQPAAYMAMIETAEIVARRYQISREAQDEYALTSQQRTAAAQAEGRFDEEIVPLEVQRALFDKEGKQTGSETVRATRDECNRADTTAESLAALKPVWSGGEAVAQGEFITAGNASQLSDGAAAVVMMSAAEAKQRGLAPLGIYRGMAVAGCDADEMGIGPALAVPKLLARHRLTVNDIGLWEMNEAFACQVIYCRDQLRIPSERLNVNGGAIAVGHPFGMSGTRMTLHGLLEARRRGVRYVVVTMCIGGGMGAAALFETAA
>NZ_CP051515.1|WP_168792139.1|2832663_2833158_-|MaoC-family-dehydratase
MERAVAETNALGRSARVFAHPRELIAAAGEQLGASAWLEVDQTRIDRFADATLDHQWVHVDAERAKEGPFGACIAHGFLTLSLVNFFLPQILCIEGARLGVNYGCDRIRFPAPVRVGARVRGVGELLRAEAFEGGVQAWVRVSVEIEGEAKPGCVADTISRYYL
>NZ_CP051515.1|WP_168791364.1|2833157_2833961_-|SDR-family-oxidoreductase
MNESQTVRSAPAYVPGHRLLAGKSVLITAAAGVGIGFAAAKRCAEEGCRALFISDIHERRLSQAVETLRAETGLQAIYGRLCNVSIEDDVRALVADAEEKLHGVDVLINNAGLGGARRIVEMDDAEWSRVIDISLTGTFRMTRAMLPHMQQRGHGVIVNNASVLGWRAQAEQAHYAAAKAGVMALTRCAALEAAPYGVRINAVAPSIALHDFLKKSASADLLDQLASREAFGRAAEVWEVANVMVFLASDYASYMTGEVLSVSSQHA
>NZ_CP051515.1|WP_168791365.1|2833957_2835151_-|acyl-CoA-dehydrogenase
MNGETQYQHLRVEVAGWMRTHLSGEFACLKYRGGPGDEEAYPALRKQWERELAAGGWTGLGWATSEGGRGFTVAEQVIFHEEYARAGGPGRMGHIGEGLLGPTLIACGTEDQRKRFLPGILSGTQFWCQGYSEPGAGSDLANIRTRAVRDDQGNWRVHGQKVWTSLAHDSDWIFVVARTDPESRGNRGLSFLLLPLDQPGIEIRPIKQMNGGAEFNEVFFDGALAAADDLVGAPGDGWRIAMTLLGFERGMSTLGQQMQFIRELEWVIDAAHEAGVAHDAVIRQRIARAWAGLRVMRYNALRMLAGADESSGGSLGREALIYKYYWSNWHRELGQLAMDVLGLDANLIAADDEKRTRLQGVFLFSRADTIYAGTNEIQLNIMAERGLGMPKEPRGTL
>NZ_CP051515.1|WP_168791366.1|2835150_2836389_-|acyl-CoA/acyl-ACP-dehydrogenase
MNLALSEEQIMIRDAAAEVLAERSASNAVRHAIEQCAGRDEALWRALAGELGWCALTVSEASGGAGLGATELVLMMEQMGRRLACVPYFGTVCLAAMALTLCDSDAARERLARIASGESSATLALPLSASFDFGDARSVSLYAEETACGYRLSGTLDQVLDGASAELLLVPARIANEAQTVALFELQGSDIASLTRTPLVTLDATRPLARLDLRAVEVPRSALLARGRQVERALSRTAWFAALALAAEQVGGAQQCLDLTLAYTADRVQFGRAIASFQAVKHRCAQMMVEIEASRSMMLGAAQAWDRAAAVAVDVDDDDTLADIAAAKVTANDAFRFCAQEAIQLHGGVGFTWEYDPQLYFKRAQAAGAMFGTTSQMLSFIARQVMDRDERPSNTVALAHADHAQNVLAGVL
>NZ_CP051515.1|WP_168791367.1|2836393_2837269_-|SDR-family-oxidoreductase
MGICNGRTVIITGAGGGLGREYALAYAAEGAAVVVNDIRHDAAQAVCDEVAQAGGRALANADDITRIDTAQRIVDAAHEAFGEIHVLVNNAGICRDRMFASMSEDDWDDVMRVHLRGHFCLAQWLAREWREASKAGAAVDARIINTSSGAGLQGSIGQANYGAAKAAIAALTLMQAAELQRYGIRVNALAPAARTSMTEGVFADMMKKPADGFDYFDPANVAPLVVWLGSEQSRDVTGQVFEAAGGMIAVAEGWRTGPRIDHGARWNVAEIGGAVAALVARREPAQRVYGS
>NZ_CP051515.1|WP_168791368.1|2837296_2838448_-|acetyl-CoA-C-acetyltransferase
MKQAYIVDALRTPTGRRKGGLAQVHAADLGGFALKELVARNAIPAEEYDDVVFGCVDTIGPLAGNIARTCWLAAGLPLTVSGVTVDRQCGSSQQAVHFAAQAVMSGTQDVVVAGGVQTMTQIPISSAMTAAVPLGFTDPFSGSIGWRTRFGDAPVSQFHAAQRIADHWNLSRETMEQYALESHRRALAAIESGYFAREIVPFAGVVDDETPRKGTTLAKMASLEPLMPGGALTAAVSSQTCDAAAALLIVSEDALKRYGLTPRARIHHLSVLGDDPLWMLTAPIPATRHALRKAGLTLDDIDVVELNEAFASVALAWLAETRYPHARTNPNGGAIALGHPLGATGARLMTSLLHELERTQGRYGLQTMCEGGGLANVTIIERL
>NZ_CP051515.1|WP_168791369.1|2838444_2839509_-|acyl-CoA-dehydrogenase
MDFVFNEDQEALVSSVRRFLMTEMTPELIRELWNTPTGRSDSIWNLFAAQGLTALSVPESHDGMGLGEVEWALLAQTYGYFAAPEPLLDTALVAVSMLEALPASERRDALLRDIAAGSARVAIAHPVNPYVSDAHVAQVLLAERDGELHWLTPHACRLNAVESVDPSRRLFEVEWERSVQTRVASRDEAAPILAGALDRGAFAVAAQLLGLTQRVLDMAIDYSAQRKQFGKPIGSYQALKHLLADVAIRYEFARPVVYRAACAIADNDPQRALYVSHAKLAATAAAQLAARHAMQVHGAIGYTWELDLQIFMKRIWALASSWGDTTFHKARVAAALIDARVPIGPAHTFELECR
>NZ_CP051515.1|WP_168791370.1|2839595_2840777_-|acyl-CoA-dehydrogenase
MKLDYTPAQRAFRAEIRGWLAEHVPREPLPSFDTEAGFAAHRAWERTLHSGRWSMVTWPRELGGRGCDLIEWLIFEEEYWRADAPMRVNQNGIFLLGPTLMDFGTDEQKARFLPAMAAGEHVWAQGWSEPNAGSDMAAIRASATRSDGGTGGEYILNGQKIWSTRAVWADWLFGLFRSDPQSTRHHGLTFLMVPLDTPGITVRPIRQLNGHTGFAEIFFDDVRVPLDHRLAGEGMGWQVAMATAGFERGLMLRSPARFQRTAEALRDLYLTHRAEADRDPALRERVIDAWMDAQAYALSTYATASRLQKGGHIGAESSTNKVFWSELDLRMHQTALDILGARGEVVPRTHKQHAALGNWLDGFLFAQAGPIYAGTNEIQRNIVAERMLGMPRS
>NZ_CP051515.1|WP_168791371.1|2840773_2841583_-|enoyl-CoA-hydratase-family-protein
MTQALDSVRSLPFRIEREGGIGELVIDQPPVNALDTQGWQALADAIDALGRDDSVHVIVLRGAGRGFCAGVDIKELAAHPERIVAVNAGNYATFRAVHRSPKPVIVAVHGFVLGGGIGICGAADVIVASECARFGVPEIDRGAMGGGAHLQRMFGVQKVRAMYFTGEMVDAAEAYRLGAIERVVPREQLRDAAMELARKIAAKSPAMLQLAKEALNGIEDGDLEDKYRWEQGFTLQAYMTNDSVEARSAFVEKRDAQFDAAQRQAGARP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP051515_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051515_2

3523643-3523745

Orphan

Consensus_repeat	Method
GGCGCACCGAAGACGCGCACGTCGATC	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_CP051515_2

>merge|NZ_CP051515|2|3523643-3523745|CRISPRCasFinder
GGCGCACCGAAGACGCGCACGTCGATCAGTTAGTGGCGCTCCTTACGCGACTGCTCGCCGAACAGCGCGACTGAGCGGCGCGCCGAAGACGCGCACGTCGATC

>NZ_CP051515|2|2|3523643-3523745|CRISPRCasFinder
GGCGCACCGAAGACGCGCACGTCGATC	AGTTAGTGGCGCTCCTTACGCGACTGCTCGCCGAACAGCGCGACTGAGC
GGCGCGCCGAAGACGCGCACGTCGATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051515.1\|WP_168791889.1\|3530410_3531931_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_CP051515.1\|WP_168791887.1\|3529013_3529340_-\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|212158
NZ_CP051515.1\|WP_168791882.1\|3523876_3524725_-\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP051515.1\|WP_168791890.1\|3531927_3532977_-\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380478
NZ_CP051515.1\|WP_168791886.1\|3527651_3528971_-\|UxaA-family-hydrolase	unknown	unknown	gnl\|CDD\|377287
NZ_CP051515.1\|WP_168791885.1\|3526416_3527457_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381387
NZ_CP051515.1\|WP_168791876.1\|3516187_3516874_-\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP051515.1\|WP_168791878.1\|3518322_3518646_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|238038
NZ_CP051515.1\|WP_168791891.1\|3533249_3534038_+\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP051515.1\|WP_007178724.1\|3519239_3519443_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP051515.1\|WP_168791877.1\|3517152_3518262_+\|N-acylglucosamine-2-epimerase	unknown	unknown	gnl\|CDD\|225493
NZ_CP051515.1\|WP_168791883.1\|3524791_3525535_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187626
NZ_CP051515.1\|WP_012428697.1\|3518745_3519021_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791884.1\|3525578_3526409_-\|amidohydrolase-family-protein	unknown	unknown	gnl\|CDD\|226145
NZ_CP051515.1\|WP_168791875.1\|3514687_3516055_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235906
NZ_CP051515.1\|WP_168791879.1\|3519555_3521178_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP051515.1\|WP_168791888.1\|3529365_3530421_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|119321
NZ_CP051515.1\|WP_168791874.1\|3514154_3514463_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_106281679.1\|3522002_3522305_+\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_CP051515.1\|WP_168791880.1\|3521447_3521882_+\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527

Protein	Function_ID	Function_description	E-value
NZ_CP051515.1\|WP_168791889.1\|3530410_3531931_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	1.94164e-166
NZ_CP051515.1\|WP_168791891.1\|3533249_3534038_+\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	5.65522e-52
NZ_CP051515.1\|WP_168791882.1\|3523876_3524725_-\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	1.48189e-104
NZ_CP051515.1\|WP_168791890.1\|3531927_3532977_-\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|380478	cd01536, PBP1_ABC_sugar_binding-like, periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. Periplasmic sugar-binding domain of active transport systems that are members of the type 1 periplasmic binding protein (PBP1) superfamily. The members of this family function as the primary receptors for chemotaxis and transport of many sugar based solutes in bacteria and archaea. The sugar binding domain is also homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR. Moreover, this periplasmic binding domain, also known as Venus flytrap domain, undergoes transition from an open to a closed conformational state upon the binding of ligands such as lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. This family also includes the periplasmic binding domain of autoinducer-2 (AI-2) receptors such as LsrB and LuxP which are highly homologous to periplasmic pentose/hexose sugar-binding proteins.	8.336e-57
NZ_CP051515.1\|WP_168791886.1\|3527651_3528971_-\|UxaA-family-hydrolase	gnl\|CDD\|377287	pfam04295, GD_AH_C, D-galactarate dehydratase / Altronate hydrolase, C-terminus. Family members include the C termini of D-galactarate dehydratase (EC:4.2.1.42) which is thought to catalyze the reaction D-galactarate = 5-keto-4-deoxy-D-glucarate + H2O, and altronate hydrolase (altronic acid hydratase, EC:4.2.1.7), which catalyzes D-altronate = 2-keto-2-deoxygluconate + H2O. As purified, both enzymes are catalytically inactive in the absence of added Fe2+, Mn2+, and beta-mercaptoethanol. Synergistic activation of altronate hydrolase activity is seen in the presence of both iron and manganese ions, suggesting that the enzyme may have two ion binding sites. Mn2+ appears to be part of the enzyme active centre, but the function of the single bound Fe2+ ion is unknown. The hydratase has no Fe-S core.	2.28603e-149
NZ_CP051515.1\|WP_168791885.1\|3526416_3527457_-\|aldo/keto-reductase	gnl\|CDD\|381387	cd19161, AKR_AKR15A1, Microbacterium luteolum pyridoxal 4-dehydrogenase (PLD) and similar proteins. Microbacterium luteolum PLD (EC1.1.1.107) is a founding member of aldo-keto reductase family 15 member A1 (AKR15A1). It catalyzes irreversible oxidation of pyridoxal.	7.96729e-164
NZ_CP051515.1\|WP_168791878.1\|3518322_3518646_+\|HNH-endonuclease	gnl\|CDD\|238038	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and anaredoxins.	0.000307366
NZ_CP051515.1\|WP_007178724.1\|3519239_3519443_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	8.15489e-37
NZ_CP051515.1\|WP_168791877.1\|3517152_3518262_+\|N-acylglucosamine-2-epimerase	gnl\|CDD\|225493	COG2942, COG2942, N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism].	6.40878e-58
NZ_CP051515.1\|WP_168791883.1\|3524791_3525535_-\|SDR-family-oxidoreductase	gnl\|CDD\|187626	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs. Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P).	3.20991e-121
NZ_CP051515.1\|WP_168791876.1\|3516187_3516874_-\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	1.20895e-50
NZ_CP051515.1\|WP_106281679.1\|3522002_3522305_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	2.27414e-09
NZ_CP051515.1\|WP_168791875.1\|3514687_3516055_-\|hypothetical-protein	gnl\|CDD\|235906	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau.	1.61637e-05
NZ_CP051515.1\|WP_168791879.1\|3519555_3521178_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	5.15256e-138
NZ_CP051515.1\|WP_168791888.1\|3529365_3530421_-\|ABC-transporter-permease	gnl\|CDD\|119321	cd06579, TM_PBP1_transp_AraH_like, Transmembrane subunit (TM) of Escherichia coli AraH and related proteins. E. coli AraH is the TM of a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of the monosaccharide arabinose. This group also contains E. coli RbsC, AlsC, and MglC, which are TMs of other monosaccharide transporters, the ribose transporter, the D-allose transporter and the galactose transporter, respectively. The D-allose transporter may also be involved in low affinity ribose transport. These transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. Proteins in this subgroup have a single TM which homodimerizes to generate the transmembrane pore.	2.80469e-67
NZ_CP051515.1\|WP_168791887.1\|3529013_3529340_-\|UxaA-family-hydrolase	gnl\|CDD\|212158	cd11613, SAF_AH_GD, Domains similar to fish antifreeze type III protein. Altronate dehydratase (EC 4.2.1.7) converts D-altronate into 2-dehydro-3-deoxy-D-gluconate and is part of a bacterial pathway for the degradation of D-galacturonate. D-galactarate dehydratase (EC 4.2.1.42) eliminates water from D-galactarate to yield 5-dehydro-4-deoxy-D-glucarate, initializing the degradation of D-galactarate. The function of the SAF domain in these enzymes is not clear. It may participate in dimerization.	1.10219e-26
NZ_CP051515.1\|WP_168791884.1\|3525578_3526409_-\|amidohydrolase-family-protein	gnl\|CDD\|226145	COG3618, COG3618, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	3.53455e-64
NZ_CP051515.1\|WP_168791880.1\|3521447_3521882_+\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	1.77438e-25

>NZ_CP051515.1|WP_106281679.1|3522002_3522305_+|helix-turn-helix-transcriptional-regulator
MTDELTRINALANASRLAVMRWLKEPTRHFPYQDHADIETVGVCCTFITDKLGIAPATTTRHMRILADAGLVRAQRIGKFTYYKRIDAELQKLGRDLANL
>NZ_CP051515.1|WP_168791880.1|3521447_3521882_+|PaaI-family-thioesterase
MTDLLDRARGALHAQPFSMLLGAELMHTSTSELTLSLRIRDELRQQHGFVHGGVISYLADNALTFAGALLLGPKVVTGEYKINYLRPAINGTLIARAKVVYAGQHQATCQCNVYVMEGNREKLIAVAQGTVNRISENGDHEHPG
>NZ_CP051515.1|WP_168791879.1|3519555_3521178_-|HAMP-domain-containing-protein
MFSKIKVASGLLCVLAAFCVFQLVTVGLGFWSLTRTHDDVGDLSNIALKQVDAVNETTQHLMDARINLSRAGTRMVRGGSEPTDIVQHAREQLTAADQSFAAFMSAPKTGDENATRAAALAERYKKLHDALAELVQFLDSNNIQAFLDQPTQSFQDAYLGESHNFVQFGSAASRASLDSIDTRMATFRAVSIVILLALVAGTFAVYAALRRGVVAPLEEAGRHFDRIAQGRLDQPIAARGTNEIGRLFSGLAKMQASVARTVQTVRESADSIHLGADEIATGNADLSARTENQAASLEETASSMEELTATVRQNAEHAREANALAETALEATSRGSEVVNEVVDKMRGIAQSSDKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRGLAQRSAQSAKEIKTLISESVAEIQGGSTLVEHAGAAMSNVSASISRVTQMMAEISASSLEQSTGIEQVNQAVVQMDEMTQQNAALVEEAAAAAASLHQQTQQLKQAVSVFEISESVLRMQQIDETRGQSADFSLSGMRAI
>NZ_CP051515.1|WP_007178724.1|3519239_3519443_+|cold-shock-protein
MATGTVKWFNDAKGFGFITPDDGGEDLFAHFSEVQGSGFKSLQENQKVTFEVKQGPKGKQAANIQPA
>NZ_CP051515.1|WP_012428697.1|3518745_3519021_-|hypothetical-protein
MTHYLQEELTSFWSRLTPYLAILESKSPQEGAPDPVGRITVDTEDRQAFALHVTDQKPHGDTSDTPTGHSATYMRFKSADSGWSPWQREEY
>NZ_CP051515.1|WP_168791878.1|3518322_3518646_+|HNH-endonuclease
MAKKFAEPWYRPPPADEICPLCGRPIPASQRDLHHWVPKTKGGKEVAALHRICHRQLHALFSEAELAQRYSTVDALLSDEAVRTFVRWVRTKPNDFYERTRRSGRKS
>NZ_CP051515.1|WP_168791877.1|3517152_3518262_+|N-acylglucosamine-2-epimerase
MQSMNPPAASTIALAASLRDHFAGVVLPIWRGPGFNTALKLPYEAVSAENHQPLPAERYRAMACARQLFVFSQAGDAAHAQVLFDSLMHTFQDTRHGGWFYSVDAQGAPLDTTKDLYTHAFVVFACAEYARRSGNHDALEIVHRTSALIQSNFAAEDDLFNAALTADFASVMGTPIQNPLMHLTEAWLAAREATHDNAFDAALRRLAGAVARRFVHAPTGCIAELPIGADDNRLEPGHQFEWFWLVKQAGAVFEGSGLAEAMPRAFSFAEQHGVDQETGGVYASLDETGRIKDATQRIWAQTEYLRALASHGEPAARAALPRQIELFQQRFLRPQGWFECKTPAGEVARADMPSTTPYHLATAYEALPA
>NZ_CP051515.1|WP_168791876.1|3516187_3516874_-|MgtC/SapB-family-protein
MLGNFELIARLMVAAALGSVIGFERERLSWAAGLRTHMLVCVGSALIMIVSAYGFAEVLTGDHVVLDPSRMAAQVVSGIGFLGAGSILLRGEIVRGLTTAASLWSVAAIGLAVGGGLYTAAIAATIIILIILAGIKPLERRFITVKQRRQLTMIVERGAMTFHSLHDELGAASPRVKQFVMQQSEDAPECDEVVITLHRVSNMEYEAICGRLRQLHGVKQFRQDDTAS
>NZ_CP051515.1|WP_168791875.1|3514687_3516055_-|hypothetical-protein
MADSVASPQSRPQRAASKKRRQATVSTETENKLARAARSAQRLAQLSNASRDDSTLDLFPDDPTRATLEAMNIDIRQGTLHGFELPDVVLAAVGATDAADNALVDARAARRAPRAAKPDDLPVPVNALLSGLEIEPLVVASPAGELVLGDAKPAADTAAFAEEKSAAPARDASAPLAPAMAAATVARSVTALRQAAEPDGMVGTAVASTAGGVKAPQRFAATFAKAASASGSASVSGSASASQEPAAVAGGAAGTTDEPASAQPDAATEGSKPGAEASMNSSASAQANAAFAAPWREARRAEAAAAALRAAPELDRARATAFADTVDALYGVIADQRHAATDHSRRMKWMLSIVVGALLVTVAIGITQTVLLMRLTRETTAQQHRIEQMMQNQQAAMASLLDTHMAMATAAAANAASEAAAAAPAAPQQATATPAHARRAARAQHVHKQKAVTPH
>NZ_CP051515.1|WP_168791874.1|3514154_3514463_-|hypothetical-protein
MPTSEHKYSIEELLGALLRDQGIHEGHWALNVEFSATGAAVKPQDNPERTLPGLIVSVNSATLMRADSTAPGAVDAAAVNPSKAAASPKPVRSRKPVSTTLQ
>NZ_CP051515.1|WP_168791882.1|3523876_3524725_-|fumarylacetoacetate-hydrolase-family-protein
MKLLRYGPKGQEKPGLLDAQGKIRDLSNVVADIDGAALTDEGLAKLRALDPASLPLVEGNPRLGPCVGKIGKFICIGLNYADHAAESNLPVPAEPVIFNKWTSAISGPNDDVEIPRGSKKTDWEVELGVVIGKPAKYIDEANALDHVAGYCVINDVSEREWQIEKGGTWDKGKGFDTFGPIGPWVVTRDEVADPQNLSLWLEVDGHRYQNGNTKTMVFGVAKLVSYVSQCMSLQPGDVISTGTPPGVGMGVKPNPVFLKPGQTIRLGIEGLGEQTQKTYAAE
>NZ_CP051515.1|WP_168791883.1|3524791_3525535_-|SDR-family-oxidoreductase
MTQRLAGKTALITAAGQGIGLATAELFAREGARVIATDIRIDGLAGKPVEARKLDVRDDVAIKALAAEVGAIDVLFNCAGFVHAGNILECSEEDWDFAFDLNVKAMYRMIRAFLPAMLDHGGGSIINMSSAASSVKGVPNRFAYSASKAAVIGLTKSVAADFITRGVRCNAICPGTVASPSLEQRIVAQAQAQGASLDAVQAAFVARQPMGRIGKPEEIAALALYLGSDESSFTTGHAHVIDGGWSN
>NZ_CP051515.1|WP_168791884.1|3525578_3526409_-|amidohydrolase-family-protein
MPIDAHQHYWDPARGDYEWLTPELKILYRTFGPEDLKPLRERAGIERTVVVQAAPTIDETRYLLDLARHEPSIAGVVGWVPLLLPTAPQVIEALAHEPKFKGVRPMLQDLPDDTWIANPDLAPAIKALIAHDLAFDALIYARHVEPFETFATRFPALRIVVDHGAKPPIRYGRAGYPGWADAITRLAQLPHVHCKLSGLVTEASPGWTEETLRPYIDHLLKSFGPARLMWGSDWPVLDLNGDYLLWHSVANTLLASLSDAEREAVFGGNAAAFYRL
>NZ_CP051515.1|WP_168791885.1|3526416_3527457_-|aldo/keto-reductase
MTATIGSKIGQRRHLGRGPLQVTGLGLGTAPLGGLYRDLSDEEAHATIAAAWDAGVRYFDTAPHYGNTKAEHRLGDALRRYPRADYVLSTKVGRRFVPRTTPFDDKEGWQNPLPFEAIYDYTHDGILRSFEDSQQRLGIVDIDILLVHDIGRVTHGDKHPHYWRQLTEGGGFRALNTLRSTGAIKAVGLGVNEGAVILDAMAEFDIDCALLAGRYTLLEQTTLDDLLPACEKRGVSILLGGAFNSGILARGVEGDLKFNYGEAPPEVIERVARLEAVCRAHGVPLAAAALQFPYAHPAVATVLTGARSADELRENAASFEKPIPAALWSALRDEGLLDSRAPAPED
>NZ_CP051515.1|WP_168791886.1|3527651_3528971_-|UxaA-family-hydrolase
MTDTSVASLPVAAQQPTLQGYLRRDGRKGIRNVVAVAYLVECAHHVAREIVTQFREPLDAFDDPSAEREPPVHLIGFPGCYPNGYAEKMLERLTTHPNVGAVLFVSLGCESMNKHYLVDVVRASGRPVEVLTIQEKGGTRSTIQYGVDWIRDARKQLAAQQKVPMALSELVIGTICGGSDGTSGITANPAVGRAFDHLIDAGATCIFEETGELVGCEFHMKTRAARPALGDEIVACVAKAARYYSILGHGSFAVGNADGGLTTQEEKSLGAYAKSGASPIVGIIKPGDIPPTGGLYLLDVVPDGEPRFGFPNISDNAEIGELIACGAHVILFTTGRGSVVGSAISPVIKVCANPTTYRNLSGDMDVDAGRILEGRGTLDEVGREVFEQTVAVSRGAASKSETLGHQEFILTYKTFEPVGPACLPSSAAVQHRVVAIEPH
>NZ_CP051515.1|WP_168791887.1|3529013_3529340_-|UxaA-family-hydrolase
MTSRPLQTDPRLILLSPADNCLIAAARLDGGTQVEIEGERVTLTKTIELGHKVARHELAKDDKVLRYGAVIGHVTEAVARGAHLHTHNLESDYLPTYTHDAGHEFVHH
>NZ_CP051515.1|WP_168791888.1|3529365_3530421_-|ABC-transporter-permease
MKNSVPSPAFGTAQAQAQPQLAAPASRGKRARSELARLRELALLPALALLIVIGAFVSPSFLTKANLISVLGASAALALVVLAESLIVLTGKFDLSLESTVGIAPAVGAMLVMPAASAGFGMQWPAAAGLLAIVVVGAVIGFINGFLVVRLRLNAFIVTLAMLIVLRGMLVGATKGGTLFDMPTSFFALATTIVLGLPLSVWLAAVAFAVAAFMLRYHRLGRALYAIGGNPEAARAAGIRVERITWGVFVLGSILASVGGLIVTGYVGAINANQGNGMIFTVFAAAVIGGISLDGGKGTMFGALTGVLLLGVVQNLLTLAQVPSFWIQAIYGAIILGSLMVARLASGEGQN
>NZ_CP051515.1|WP_168791889.1|3530410_3531931_-|sugar-ABC-transporter-ATP-binding-protein
MSELTPSVPVVEALAVTKRFGSTAALQDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTGEVRFSGAAAPSIADRDAWRERVACVYQHSTIIRDLSVAENLFINRQPLRGGVIDWQAMRRDARALLDHWKIDVREDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRLFRRISELQREGVTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMTGERGGLAVADAAARAKLPADTAIALEVEELAGADYEAVSFTVKRGEVVGLTGATSSGRTSVAEAIAGLRAAKRGTISVDGAILPPGDVPAALAHGIGCVPKDRHHEGLVLTQSVAENASMTIARVLGKFGIAPPAKKNAFGQKMIDALGIVAQGPEHVVSGLSGGNQQKVVMARALATNPNVLVLIDPTAGVDVKSKEALLSVVDRVREEGKAVLVVSGELDDLRTCDRVLVMFRGRVAAEFPAGWQDHDLIASVEGVSLHEE
>NZ_CP051515.1|WP_168791890.1|3531927_3532977_-|sugar-ABC-transporter-substrate-binding-protein
MSFAKGPLTARRLFRTPLSVTAAAACLAGLAVTGAAQAADSGKIGLGLPLLTSPFWQSYNNYLPKYAKESGLDILAPVNSNGDPVQQITDMNNLLNLGAKGIVVGPLDSAAISRALDAAAAKNVPVVAVDVAPTQGKVAMVVRADNHAYGEKACKYIGDHVKSGKVVQIMGDLASVNGRDRSEAFRSCLKGYPGLSLLEIPASWKGDVAATALDSLLTANPDVKAIYMQAGGVYLSPTLQTLRRKQMLFPAGDAKHVVIVSNDGIPQEFDAIRRGDIDATVSQPADSYAKYGLFYIKAALAGQTFKPGPTDHGSNIIQLAPGILEDQLPAPLVTKSNVDDKALWGNTVK
>NZ_CP051515.1|WP_168791891.1|3533249_3534038_+|IclR-family-transcriptional-regulator
MDADDKDDADRYRAPALDKGLDILELLAEQKEGLTRAEITKLLGRNASEMYRMLERLVARQYVVRSAAGDRYSLSLKLYALAHRHPPMNRLISEALPLMQRFADAAEQSCHLVVYDRGNLLVIAQVDGPGTWGMSVRLGSRVGLIDTGSGRVMLAFQSIEQREQMLAEHTKVKGEVTIDRDALEQACERIRAAGFSQKDSQQTFGVTDLTFPIQGPSGQAIAVLTCPYLRRIDEYVAPTLEAATALLRETVQALSMFHENAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP051515_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051515_3

3604895-3604982

Orphan

Consensus_repeat	Method
TGCTCCCGAAAAACCTCACCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051515_3

>merge|NZ_CP051515|3|3604895-3604982|CRISPRCasFinder
TGCTCCCGAAAAACCTCACCTTTGACACGGAGCGCTTGGGGTTCGAGGCGAGGTGCGTGTCGGATTGCTCCCGAAAACCCTCACCTTT

>NZ_CP051515|3|3|3604895-3604982|CRISPRCasFinder
TGCTCCCGAAAAACCTCACCTTT	GACACGGAGCGCTTGGGGTTCGAGGCGAGGTGCGTGTCGGAT
TGCTCCCGAAAACCCTCACCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051515.1\|WP_168791941.1\|3599662_3600856_-\|CoA-transferase	unknown	unknown	gnl\|CDD\|224717
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP051515.1\|WP_168791947.1\|3606936_3607479_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791942.1\|3600967_3601903_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176113
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_CP051515.1\|WP_168791944.1\|3603092_3603851_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180796
NZ_CP051515.1\|WP_168791939.1\|3597321_3598653_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|340393
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP051515.1\|WP_007178665.1\|3605540_3605906_-\|response-regulator	unknown	unknown	gnl\|CDD\|381110
NZ_CP051515.1\|WP_168791946.1\|3605927_3606899_-\|chemotaxis-protein-CheX	unknown	unknown	gnl\|CDD\|379336
NZ_CP051515.1\|WP_168791951.1\|3611634_3612042_-\|DUF1398-domain-containing-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791936.1\|3594519_3595965_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
NZ_CP051515.1\|WP_168791937.1\|3596062_3596335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791943.1\|3602008_3602968_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NZ_CP051515.1\|WP_168791938.1\|3596705_3597098_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|132881
NZ_CP051515.1\|WP_168791945.1\|3603908_3604676_-\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP051515.1\|WP_168791940.1\|3598712_3599666_-\|hydroxymethylglutaryl-CoA-lyase	unknown	unknown	gnl\|CDD\|163676

Protein	Function_ID	Function_description	E-value
NZ_CP051515.1\|WP_168791941.1\|3599662_3600856_-\|CoA-transferase	gnl\|CDD\|224717	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion].	2.56455e-152
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.64301e-12
NZ_CP051515.1\|WP_168791942.1\|3600967_3601903_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176113	cd08421, PBP2_LTTR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.81152e-78
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.27527e-107
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	8.8058e-115
NZ_CP051515.1\|WP_168791944.1\|3603092_3603851_+\|SDR-family-oxidoreductase	gnl\|CDD\|180796	PRK07023, PRK07023, SDR family oxidoreductase.	2.65347e-136
NZ_CP051515.1\|WP_168791939.1\|3597321_3598653_-\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.83814e-86
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	gnl\|CDD\|340393	cd16916, HATPase_CheA-like, Histidine kinase-like ATPase domain of the chemotaxis protein histidine kinase CheA, and some hybrid sensor histidine kinases. This family includes the cytoplasmic histidine kinase (HK) CheA, a transmembrane receptor which, together with cytoplasmic adaptor protein (CheW), forms the lattice at the core of the chemosensory array that controls the cellular chemotaxis of motile bacteria and archaea. CheA forms a two-component signal transduction system (TCS) with the response regulator CheY. Proteins having this CheA-like HATPase domain generally also have a histidine-phosphotransfer domain, a histidine kinase homodimeric domain, and a regulatory domain; some are hybrid sensor histidine kinases as they contain a REC signal receiver domain.	2.58298e-43
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP051515.1\|WP_007178665.1\|3605540_3605906_-\|response-regulator	gnl\|CDD\|381110	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins. CheY family chemotaxis response regulators (RRs) comprise about 17% of bacterial RRs and almost half of all RRs in archaea. This subfamily contains Vibrio cholerae CheY4 and similar CheY family RRs. CheY proteins control bacterial motility and participate in signaling phosphorelays and in protein-protein interactions. CheY RRs contain only the REC domain with no output/effector domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.14816e-41
NZ_CP051515.1\|WP_168791936.1\|3594519_3595965_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.50645e-108
NZ_CP051515.1\|WP_168791943.1\|3602008_3602968_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.07165e-88
NZ_CP051515.1\|WP_168791946.1\|3605927_3606899_-\|chemotaxis-protein-CheX	gnl\|CDD\|379336	pfam13690, CheX, Chemotaxis phosphatase CheX. CheX is very closely related to the CheC chemotaxis phosphatase, but it dimerizes in a different way, via a continuous beta sheet between the subunits. CheC and CheX both dephosphorylate CheY, although CheC requires binding of CheD to achieve the activity of CheX. The ability of bacteria to modulate their swimming behaviour in the presence of external chemicals (nutrients and repellents) is one of the most rudimentary behavioural responses known, but the the individual components are very sensitively tuned.	2.67479e-13
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	gnl\|CDD\|132881	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this family, AlkC and AlkD from Bacillus cereus, are distant homologues and are composed of six variant HEAT (Huntington/Elongation/ A subunit/Target of rapamycin) repeats. HEAT motifs are ~45-amino acid sequences that form antiparallel alpha-helices, which are packed by a conserved hyrophobic interface and are tandemly repeated to form superhelical alpha-structures. AlkD and AlkC are specific for removal of 3-methyladenine (3mA) and 7-methylguanine (7mG) from the DNA by base excision repair. Homologues of AlkC and AlkD were also identified in other organisms.	1.59247e-91
NZ_CP051515.1\|WP_168791945.1\|3603908_3604676_-\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	3.12496e-72
NZ_CP051515.1\|WP_168791940.1\|3598712_3599666_-\|hydroxymethylglutaryl-CoA-lyase	gnl\|CDD\|163676	cd07938, DRE_TIM_HMGL, 3-hydroxy-3-methylglutaryl-CoA lyase, catalytic TIM barrel domain. 3-hydroxy-3-methylglutaryl-CoA lyase (HMGL) catalyzes the cleavage of HMG-CoA to acetyl-CoA and acetoacetate, one of the terminal steps in ketone body generation and leucine degradation, and is a key enzyme in the pathway that supplies metabolic fuel to extrahepatic tissues. Mutations in HMGL cause a human autosomal recessive disorder called primary metabolic aciduria that affects ketogenesis and leucine catabolism and can be fatal due to an inability to tolerate hypoglycemia. HMGL has a TIM barrel domain with a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. The cleavage of HMG-CoA requires the presence of a divalent cation like Mg2+ or Mn2+, and the reaction is thought to involve general acid/base catalysis. This family belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues that cap the core of the barrel. In addition, the catalytic site includes three invariant residues - an aspartate (D), an arginine (R), and a glutamate (E) - which is the basis for the domain name "DRE-TIM".	5.1573e-162

>NZ_CP051515.1|WP_168791945.1|3603908_3604676_-|response-regulator
MSQHILFVGADAGLTAVVGESLRGQGCGVSARPPAAGLKHVIEMERPSLLVLDISAPHGDGLAVLRDLRMSGNDVPVILLSASSKAIDRVIGLELGADDFMSKPADPAELLARIRVLLRRRGTLAPGAPETRPPYRFGRCELNFSARELRRDNEHFALRSSEFALLKIFVNHAMTVLTRVQLNEKLRGNSVLHQGRSLDVSIWRLRRLIEIDPSEPRYVQTVWGRGYVFVPHGELGAAERGVMVAPGVQIRGESG
>NZ_CP051515.1|WP_168791944.1|3603092_3603851_+|SDR-family-oxidoreductase
MTTPSPIRAIVTGHTRGLGAALAEQLLARDIAVLGLSRSRHDALKARFPALLEEIELELADTARVAQWIASDALREFVSGAQTVLLINNAGMVQPIGPIEGQDAASIASAVSLNVATPLMLASALAAAAVDATDRRIVHISSGAARNAYPGWSIYCATKAALDHHARAVALDANRALRICSLAPGVIDTNMQAEIRGSGVEQFPMRERFEELKRNGQLSTPEQCATQLLDYALSDAFGQTPVADIREIAKPA
>NZ_CP051515.1|WP_168791943.1|3602008_3602968_+|GlxA-family-transcriptional-regulator
MPTVAIAIFPGVQALDVAGPVDVFSEANRFIAPADAYEVKLLSADAAPLRASNGMMLVADATFDKARGPFDLALVAGGPALPDTTPDAPLLDWLANVASQCSRYGSICTGAFALGHAGLLDDRNVTTHWQHAAQLAAQFPKARVDFDRIYLRDGQLVTSAGVTAGIDLSLALVAEDHGPHTALAVAKRLVVFAQRQGGQSQFSPYLTAAADDTSPVAKVQAHVMERIRESFSVKQLADVAGMSARNFARVFVQETGVTPHEFVERARVDAARKLLESSGAALKAIAYDCGFGTADRMRIVFTKRIGATPMQYRERFRSA
>NZ_CP051515.1|WP_168791942.1|3600967_3601903_-|LysR-family-transcriptional-regulator
MVIKNLLRRLDLTTLQLFLAVYEEGTLTRAAEREAIAVSAASKRLLELEQAVGATLFQRNARGMTLTPAGETLLHHARRVMRDIENIGIELAGHASGVRGYVRMMANLSAIVEFLPEDLRAFQLQHERVKLDLEERPSGGVVEAVDDSLVDVGICSGDADTRDLHVEHYRHDSLVLVMRDDHPLASRESVAFVETLDGDHVGLHAASSINARTHLAARQAGKPLRLRIHVPGFDAVCRMVQAGMGVGVLPLKVYQLMGRPLGLVGTPLEDDWSARSLVLVVRDVDALSPVSRLLFDHLRSIEASEAPPALA
>NZ_CP051515.1|WP_168791941.1|3599662_3600856_-|CoA-transferase
MGGPLQGIRVIEIGTLIAAPFAARLMAEFGADVIKIEAPETGDPLRKWRKLHEGTSLWWYLQSRNKKSICVNLKSADGVEIVKRLAADADVVIENLRPGALEKLGLGWDVLHAINPKLTMVRISGYGQSGPYRDRPGFGAIGEAMGGIRYTTGDVDGAPARVGVSLGDSLASLHGVIGALMSLLRVKTGQGEGQVVDVSLVESVFNLMESLVPEYDLLGHVRERSGGALPGIAPSNTYRTEDEGFVVIAGNSDPIFKRLMQVIGRPDLADDPALARNDGRVQHCAMLDQAITEWTSHHSTDDVLAALERAEVPSGRIYSVADIVADPHYQARDMLLEAQLPGGASVKMPGIVPKLSDTPGEVRWQGPALGEHTGSVLSELGFADEDIERLRREGAVQ
>NZ_CP051515.1|WP_168791940.1|3598712_3599666_-|hydroxymethylglutaryl-CoA-lyase
MTRALNTPHYDKLIVQEVAPRDGLQIEPTWVDTPDKIALINALSTAGFTRIEAGSFVSPKAIPALRDGDAVFQQIERQPGVIYVALIPNLKGAERALASRADELNLVMSASQTHNRANMRMSCESSLVAFGDIVRHVKGSGVLLNASVATAFGCPFEGKIDEDRVISIVDTYREMGIEGITLADTTGMANPRQVTRLVTRVLERLPATALTLHFHNTRGLGLANVLAAYEAGARRFDAALGGLGGCPFAPGASGNICTEDLVNLCDEMGIPTGIDLEKLIALSRGLPALLGHDVPGQLAKAGRNCDLHPVPEYVLQI
>NZ_CP051515.1|WP_168791939.1|3597321_3598653_-|MFS-transporter
MSDLGAVATGNREHSANDAAAIIRKVAWRLMPLIMICYLFAFFDRINISFAKFQLQSDLGLSDTAYGLGASLFVIGYVLFEVPSNLFLYKVGARRWIARIMISWGLATAAMVFVSNEWQFYGLRFVIGAMEAGFAPGVLYYLTLWFPPSYRGRVTSMLFLASAFSGLVGAPLAGLVIGHMNGVLGMPGWHWLFLLGGLPCIVLGYLVLKLLKDRIEDAGWLSSAEKSFLSGQIAQQSRHPDTGHSLMGAIRTPGFLTLGLVYFLIQVASYGLNFWAPHLIHAAGTNNPTVIGLLTAVPYIAGAICMVVVGRLSDASGERRKFVFGLLVMSAIGFFAAGFFDKQTALLVVALAVMGAGVVASIPAFWALPPKLVTGAGAAGGIALINTLGQLGGIVSPIMVGRVRDLTGSTTPALYVIGAMSLVCALIVLYGLPDTLRRKEAAR
>NZ_CP051515.1|WP_168791938.1|3596705_3597098_+|hypothetical-protein
MELNIVEQVALTLRRMGEHRRLVPYQRFHALFDRMDPLSSRYATLEKAVALLAGESGVDYGALLTSANGLAGKEFYLRFRRNRFDDYLAIMGSQMHEHSLKKKRCLVEAERARVFDDAMRRQRSAERETA
>NZ_CP051515.1|WP_168791937.1|3596062_3596335_+|hypothetical-protein
MFDAEIAATLLNRWAAQAPTEECHPYLGLLREGNLHFIHEVDCVGTRGIRDTGACCTESLFFGDGSRALRVGAPDSETGWTRWSALQPLQ
>NZ_CP051515.1|WP_168791936.1|3594519_3595965_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MTRRATIASVKASPPDLAASMPVDDAAFHMRWGVSSEQPSPIRHLGYASFLDSLTGLYNRAYVAERVQHLLKLMPAARVAVLFINLDCFGKVNDIAGYDLGDRVLRGVARRLAGLMNHDDLLGRICGDEFVVVVDKRGDAPAIGEFALRILDLFSAPLEIAGREYHLGASIGIACSSDGARDADALIRDAGSAMRRAKESGRGRVQFFTQGLQDQLQRRFRVVELLHHALAAGELKLAYQPIIDSASHEAVGAEALLRWTSSELGEVAPAEFVPVAEEAGLMESIGDWVLEQACAQAAQWRRSIAPRLPVSVNISPLQFNERLVRHVAACLERSGLDPLALQLEITERVLMPDDPAVAATTAALADLGVTLALDDFGTGYASLSYLKRFALHNLKIDRSFVAGLPHDSESIAITRALVTMAHACSMTITAEGVETLEQATALREMGCDMLQGYLFSRPASADEFAGALLGASRANIRRATQ
>NZ_CP051515.1|WP_007178665.1|3605540_3605906_-|response-regulator
MSKILVVDDSSTVRDEVAGFLKKNGLDVDTAVDGKDGLAKLKASPGIKLVISDVNMPNMDGLTMVEKIRGELANKTVNVIMLTTESSPAMKERGKAAGVKGWIVKPFKGDAVLETFRKLAS
>NZ_CP051515.1|WP_168791946.1|3605927_3606899_-|chemotaxis-protein-CheX
MNMNKPVSKVLVLDDCPAHKEALKRFCDENNLVGVKVGKNRLQSVLRSNIDLGAVLFAERYGGSPEASAEIAIRINAVRPELPIIMRRDNDPGMDGLPESLRRVVCAAYVAHDMAPLRQVIDDYIFSLDYPNALVRGIADMTQAILGDVFKDLTITCDTPYIVRDRIIFGEVFSLIPLESAWCRGYMMMQAEETPILELLDRYQMVDNARHGEADFRDLNSVLGEVTNLIWGSFKNRYVGDADAWARSQVQVPLLVNHKHKYISFGSGNPQLCFTYWLKDPQSNRAVKLHQRFVFSLSWSPEDFKEVTDDVGAMVEAGELDLF
>NZ_CP051515.1|WP_168791947.1|3606936_3607479_-|hypothetical-protein
MISAHATDSFDRIFRKASQARLPLNSGDLCEITPMADVSVGVSKNTQVVVLTISSIVFRLLLILHFDEDDSTRSYYLKGSTEERNFQEAFLEICNLCCGAMNQELLRYFPDLGMSTPYVLNARCLPHLHELKPALLSSYSITLDGSVRLAATICVCAHAPLDFVADTSAVEETSGELELF
>NZ_CP051515.1|WP_168791948.1|3607475_3608210_-|chemotaxis-protein
MIQQYVLAVAAGSAVTALLAFAAHRLHSAKLTERLRAEAQASISRLEAERADHGAAIREREQAEQELHALTTQLREELAQQQSKADELRAALKAASEDKDQLAHQARQIAGEAERLKSLGATFERWHEQMISLMTQNHDMHAKNQELSSIVRHVVIVSLNASIEAARAGPAGRGFAVVASEVRALAARSEELSKSYRDSLHRNDLTTTSTFQDIQAGGKMIAASLASVESLAHQFHAKLHEVAA
>NZ_CP051515.1|WP_168791949.1|3608255_3610646_-|HAMP-domain-containing-protein
MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDVQLATMTLVYAPDANMVAQAQDDLKKKRTSLQQALALQAKDAASHAQKGLVSQANDSLENYFSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDDAISTLNTTLSTTTTAIAVVTGIAIILLTSIGSLLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRFDEIGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDIFETKDIAGRGLMDLVFADTDLGSDALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMTDGRVKILDLSWSAITDENDVIGRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEEKFHHFIESSAGFVSENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHETEQSYHELRQPDADRSWDQEHLMSELTRVREAIESYAKINEQSLGRKNKSLTNDAANSAHYVMVAKDHIQHTLSMLEQTNAGELHELQSMRDALRRTLRALGSESVRDALAGVLDSLPSLASELGKPAPDVRIDDNGYRLRGQAGGTLNNVFMHLLRNSMDHGIETAEARSAHGKVQAGAIEIDVGVDNGALQITLSDDGRGLALERIRGIAMERGWIGQDDTLSDEAIADFIFRPGFSTAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDRKGAAFRQFQTIVCLPDSVAVDTLGVEARGEAGALQLDAMVD
>NZ_CP051515.1|WP_168791950.1|3610936_3611638_-|DNA-alkylation-repair-protein
MTPHAFAKEIKAVLAPHADAERALAMRAYMRHQFDFIGVPTPLRRQAVTPVFKRLPVQNAEHLLACANRLWTMPAREYQYVATDLLARNWKTLAVTDIAHLLTIAQHASWWDSIDPLAAVVGDVLKAARVQTPQAQAQAVMDAALQHESMWVRRIAMIHQLGWRGHTDEDRLFGYARSLAAESDFFIRKAIGWALRDYARHAPEAVSDFLSASRDLISPLTLREASKHLLPIR
>NZ_CP051515.1|WP_168791951.1|3611634_3612042_-|DUF1398-domain-containing-protein
MPARLDEASRRVAEDCAQRSHNGTIDFGSVVRALGEAGIESYFTDYRRGEHTYYAPGGETHVIALPLPDVAIANAFDADAVNQAVRGAQNGAVKYAEFVRRTLTAGCVGYFVWIAGRQVQYFGRRGEVHVERFPQ
>NZ_CP051515.1|WP_168791952.1|3612266_3613700_-|efflux-transporter-outer-membrane-subunit
MMRLKLGACAVACALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSAAAAAKSASGTAATSPLAIDTAWRDFFRDERLERLIEIALANNRDMRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQGVTSSASDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLASYRRAVAQDRNNLVAVLGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIVQAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVQADREYVASSQRYYTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLGGGWEQG
>NZ_CP051515.1|WP_168791953.1|3613696_3616888_-|efflux-RND-transporter-permease-subunit
MAGFFINRPILAWVIAIVIMMIGGASIGTLPVEQYPSVAPVSVQITATYPGASAETIATTVTQVIEQKLSGIDHLLYMSSTSSSSGQARITLTFQQGTNADIAQVQVQNKVEQASSSLPETVQEQGVQVAKAANAFLMIVSLSSTDGSMNSIDLGNIIATQIEDPLTQIDGVGDVTLFGAQHAMRIWLDPVKLQALGLTTADVTTAITNQNVQLSVGQVGGSPSTKTQAINATISASSLLTTPVQFGAILLRVNSDGSKVMLKDVARVEVGGDDYSTDSRLNGKPAASLAVKLASGANAMSVAKAVRAKLDEMSGQLPRNVVVDYPYDTTPFVKISIEEVVKTLVEAVMLVFVVMYVFLQNLRATLIPTIVVPVALLGTFAVMSLVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERLIAEEGLSPVEATRKAMKQITGALVGITTVLIAVFIPMAFFSGSTGAIYRQFSVTIVAAMLLSVFLALTLTPALCATLLRRTDVEHHAKRGVFGWFNRVLARGTDRYDSAVSRVIGNPMRYMVIYVLIAGVVALLFMKLPSSYLPDDDQGIIITSISAPVGTPAAQTLETVKKVEAYYLGLPQVDKIIALTGFSFNGSGQNNALTFVKLKDWSTRRGKDGSASALIQHANMHFAATRDAQIFALNPPAIQELGTQSGLDFELEDRAGQGHDKLMAARQQLIALAAKDSALSGMRPGGLDDTPQFHVDIDREKASALGLSIADVNDTLQTAFGSSYVNNYVDTGRIQKVYVQADAPYRMMPSDIGRWYVRSSTTSTSTSTTTAASGTSSTTTSGYDGEMVPFSAFATGKWTFGPPQIERFNRTLAMEITAQTGANTSTGQAMDAVDALVKKLPAGYGIDWTGQSYQERIAGSQAIYLYAISLIVVFLCLAGLYESWSIPIAVILVVPLGVLGAVLGAHIRGLSDDIYFKVGLLATIGLSTKNAILIVEFAKDLQAQGRGLIEATIEAARLRLRPILMTSLAFIFGVLPLVISSGAGSASRHAIGTGVMGGMIAATFLAIFFVPVFFVVVRRLFGEHGDPKQQEGVE
>NZ_CP051515.1|WP_168791954.1|3616900_3618130_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MPTLSIAVEPSRRAPAFTLLAAAVAVATFMLSGCGEQTSHGPMQSVPEVSVETITPHTVVSSTELSGRLSAIRVAEVRPQVEGIVRKRLFTEGSQVAADAVLYQIDASSYQATYDQAVGTLAKAVATANAAQTKAARYAELSKIQGVSRQDYDDAVAALDEAKADVVADRAALKTAAINLGYTKVVAPIAGRIGKSSVTEGALVTAEQTTALATVQATTEMYLDVTRSSADWLRLQKEFASGQLQQSGTDGAVVHLVMEDGSTYAQPGKLLFSDITVDATTGSVTLRCVFPNPDGVLLPGMFVRARLEEGVNQQAITVPQLAVSRASDGSASVLTVGADNKVAQTAVTADTASGSDWLVTSGLKAGDRVIVAGSQKARTGAVVKPVESPGTSGTSGAPATADNTSAAHS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP051515_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051515_4

3621084-3621162

Orphan

Consensus_repeat	Method
GTTATCTCCTGGAATTCCTCACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051515_4

>merge|NZ_CP051515|4|3621084-3621162|CRISPRCasFinder
AGAACTCCCTGGAAATCCTCACCTTATCTTCGGTGCGGATTCAGCGCGGCGTTGACTCACCTCCTGGAATCGCTCACCT

>NZ_CP051515|4|4|3621084-3621162|CRISPRCasFinder
AGAACTCCCTGGAAATCCTCACC	TTATCTTCGGTGCGGATTCAGCGCGGCGTTGA
CTCACCTCCTGGAATCGCTCACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051515.1\|WP_168791958.1\|3621421_3621673_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP051515.1\|WP_168791963.1\|3628190_3628670_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP051515.1\|WP_168791959.1\|3622014_3622290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|340393
NZ_CP051515.1\|WP_012428787.1\|3630194_3631226_-\|L-threonine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|180054
NZ_CP051515.1\|WP_168791962.1\|3627461_3627980_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791951.1\|3611634_3612042_-\|DUF1398-domain-containing-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791965.1\|3631239_3632439_-\|glycine-C-acetyltransferase	unknown	unknown	gnl\|CDD\|235893
NZ_CP051515.1\|WP_168791961.1\|3622910_3626606_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366600
NZ_CP051515.1\|WP_168791956.1\|3619204_3620452_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|132881
NZ_CP051515.1\|WP_168791966.1\|3632588_3633227_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|380339
NZ_CP051515.1\|WP_168791957.1\|3620536_3620737_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240227
NZ_CP051515.1\|WP_168791955.1\|3618480_3619221_+\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP051515.1\|WP_168791960.1\|3622333_3622687_+\|superinfection-immunity-protein	unknown	unknown	gnl\|CDD\|379585
NZ_CP051515.1\|WP_168791964.1\|3629456_3630107_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274

Protein	Function_ID	Function_description	E-value
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	8.8058e-115
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.27527e-107
NZ_CP051515.1\|WP_168791963.1\|3628190_3628670_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	6.32049e-99
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.64301e-12
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	gnl\|CDD\|340393	cd16916, HATPase_CheA-like, Histidine kinase-like ATPase domain of the chemotaxis protein histidine kinase CheA, and some hybrid sensor histidine kinases. This family includes the cytoplasmic histidine kinase (HK) CheA, a transmembrane receptor which, together with cytoplasmic adaptor protein (CheW), forms the lattice at the core of the chemosensory array that controls the cellular chemotaxis of motile bacteria and archaea. CheA forms a two-component signal transduction system (TCS) with the response regulator CheY. Proteins having this CheA-like HATPase domain generally also have a histidine-phosphotransfer domain, a histidine kinase homodimeric domain, and a regulatory domain; some are hybrid sensor histidine kinases as they contain a REC signal receiver domain.	2.58298e-43
NZ_CP051515.1\|WP_168791965.1\|3631239_3632439_-\|glycine-C-acetyltransferase	gnl\|CDD\|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0
NZ_CP051515.1\|WP_012428787.1\|3630194_3631226_-\|L-threonine-3-dehydrogenase	gnl\|CDD\|180054	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated.	0
NZ_CP051515.1\|WP_168791961.1\|3622910_3626606_-\|hypothetical-protein	gnl\|CDD\|366600	pfam01375, Enterotoxin_a, Heat-labile enterotoxin alpha chain.	1.59171e-28
NZ_CP051515.1\|WP_168791956.1\|3619204_3620452_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	1.13216e-44
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	gnl\|CDD\|132881	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this family, AlkC and AlkD from Bacillus cereus, are distant homologues and are composed of six variant HEAT (Huntington/Elongation/ A subunit/Target of rapamycin) repeats. HEAT motifs are ~45-amino acid sequences that form antiparallel alpha-helices, which are packed by a conserved hyrophobic interface and are tandemly repeated to form superhelical alpha-structures. AlkD and AlkC are specific for removal of 3-methyladenine (3mA) and 7-methylguanine (7mG) from the DNA by base excision repair. Homologues of AlkC and AlkD were also identified in other organisms.	1.59247e-91
NZ_CP051515.1\|WP_168791966.1\|3632588_3633227_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.21997e-17
NZ_CP051515.1\|WP_168791957.1\|3620536_3620737_-\|hypothetical-protein	gnl\|CDD\|240227	PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional.	0.000131838
NZ_CP051515.1\|WP_168791955.1\|3618480_3619221_+\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.11379e-98
NZ_CP051515.1\|WP_168791960.1\|3622333_3622687_+\|superinfection-immunity-protein	gnl\|CDD\|379585	pfam14373, Imm_superinfect, Superinfection immunity protein. This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected with two T-even type bacteriophage the DNA of the superinfecting phage is excluded from the host, into the periplasmic space. The immunity protein plays a role in this process.	1.01172e-14
NZ_CP051515.1\|WP_168791964.1\|3629456_3630107_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.73245e-51

>NZ_CP051515.1|WP_168791957.1|3620536_3620737_-|hypothetical-protein
MKKLLAIAALAALSATLSGCWWGPPPGWGGGGQGHGGPGGGPGGGGPGGGDGPHGAIVVPGNVAQA
>NZ_CP051515.1|WP_168791956.1|3619204_3620452_+|HAMP-domain-containing-protein
MTNPFNTLFGRLSLMTVSLIVLVHITAMLLVDRERGQIDTGHARQALLLAVQAEHDGALAASHVSAILGVSYVKTNDAIAAGCPAPCENTSGPFERDLRAKLPPGSQVVADADDGTVWVHYAGYSDWLKLQNSMLPARRFLGASATMLVLAVIIALVGAWHLQRPLHRLALAAREFRVGHRAPVVEASGPRELKELIGDFNQMVHELAQAEQERAVMLAGVAHDLRAPITRMQVRADLLPDEANRRGFLRDAESLSRIVTQFLDFARETADTSPRTNVDAHCRRHYGDSLADDALVRLNLHAGDGFELPLVDLDRILTNLIENALTYGEPPVEISTSRHNGRFTLEVRDHGSGIPGGQLDRALQPFVRLDEARSGDAHCGLGLAIVRRLVRYNSGAFHADNAADGGFVVSMTFPA
>NZ_CP051515.1|WP_168791955.1|3618480_3619221_+|response-regulator
MSDTPIQVLLVDDDADLRDLLRTFFQQRGIEMSVLHDANHLARRLERERPSIIVLDLMMPGIDGLSALKQLRANGDTIPVIMLTARADGVDRVVGLELGADDYLGKPFMPQELLARIHAVLRRHAQPAPAAAAPVEKREALRFGRFRLDFASRTLFRDDEPLKLTGSEYALLEVLAQHPMETLSRSKLVDLLHGPYSEVTERGIDVPVWRLRRLLEEDPANPRLIQTLRGTGYMFVPGGSDDDQSL
>NZ_CP051515.1|WP_168791954.1|3616900_3618130_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MPTLSIAVEPSRRAPAFTLLAAAVAVATFMLSGCGEQTSHGPMQSVPEVSVETITPHTVVSSTELSGRLSAIRVAEVRPQVEGIVRKRLFTEGSQVAADAVLYQIDASSYQATYDQAVGTLAKAVATANAAQTKAARYAELSKIQGVSRQDYDDAVAALDEAKADVVADRAALKTAAINLGYTKVVAPIAGRIGKSSVTEGALVTAEQTTALATVQATTEMYLDVTRSSADWLRLQKEFASGQLQQSGTDGAVVHLVMEDGSTYAQPGKLLFSDITVDATTGSVTLRCVFPNPDGVLLPGMFVRARLEEGVNQQAITVPQLAVSRASDGSASVLTVGADNKVAQTAVTADTASGSDWLVTSGLKAGDRVIVAGSQKARTGAVVKPVESPGTSGTSGAPATADNTSAAHS
>NZ_CP051515.1|WP_168791953.1|3613696_3616888_-|efflux-RND-transporter-permease-subunit
MAGFFINRPILAWVIAIVIMMIGGASIGTLPVEQYPSVAPVSVQITATYPGASAETIATTVTQVIEQKLSGIDHLLYMSSTSSSSGQARITLTFQQGTNADIAQVQVQNKVEQASSSLPETVQEQGVQVAKAANAFLMIVSLSSTDGSMNSIDLGNIIATQIEDPLTQIDGVGDVTLFGAQHAMRIWLDPVKLQALGLTTADVTTAITNQNVQLSVGQVGGSPSTKTQAINATISASSLLTTPVQFGAILLRVNSDGSKVMLKDVARVEVGGDDYSTDSRLNGKPAASLAVKLASGANAMSVAKAVRAKLDEMSGQLPRNVVVDYPYDTTPFVKISIEEVVKTLVEAVMLVFVVMYVFLQNLRATLIPTIVVPVALLGTFAVMSLVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERLIAEEGLSPVEATRKAMKQITGALVGITTVLIAVFIPMAFFSGSTGAIYRQFSVTIVAAMLLSVFLALTLTPALCATLLRRTDVEHHAKRGVFGWFNRVLARGTDRYDSAVSRVIGNPMRYMVIYVLIAGVVALLFMKLPSSYLPDDDQGIIITSISAPVGTPAAQTLETVKKVEAYYLGLPQVDKIIALTGFSFNGSGQNNALTFVKLKDWSTRRGKDGSASALIQHANMHFAATRDAQIFALNPPAIQELGTQSGLDFELEDRAGQGHDKLMAARQQLIALAAKDSALSGMRPGGLDDTPQFHVDIDREKASALGLSIADVNDTLQTAFGSSYVNNYVDTGRIQKVYVQADAPYRMMPSDIGRWYVRSSTTSTSTSTTTAASGTSSTTTSGYDGEMVPFSAFATGKWTFGPPQIERFNRTLAMEITAQTGANTSTGQAMDAVDALVKKLPAGYGIDWTGQSYQERIAGSQAIYLYAISLIVVFLCLAGLYESWSIPIAVILVVPLGVLGAVLGAHIRGLSDDIYFKVGLLATIGLSTKNAILIVEFAKDLQAQGRGLIEATIEAARLRLRPILMTSLAFIFGVLPLVISSGAGSASRHAIGTGVMGGMIAATFLAIFFVPVFFVVVRRLFGEHGDPKQQEGVE
>NZ_CP051515.1|WP_168791952.1|3612266_3613700_-|efflux-transporter-outer-membrane-subunit
MMRLKLGACAVACALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSAAAAAKSASGTAATSPLAIDTAWRDFFRDERLERLIEIALANNRDMRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQGVTSSASDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLASYRRAVAQDRNNLVAVLGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIVQAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVQADREYVASSQRYYTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLGGGWEQG
>NZ_CP051515.1|WP_168791951.1|3611634_3612042_-|DUF1398-domain-containing-protein
MPARLDEASRRVAEDCAQRSHNGTIDFGSVVRALGEAGIESYFTDYRRGEHTYYAPGGETHVIALPLPDVAIANAFDADAVNQAVRGAQNGAVKYAEFVRRTLTAGCVGYFVWIAGRQVQYFGRRGEVHVERFPQ
>NZ_CP051515.1|WP_168791950.1|3610936_3611638_-|DNA-alkylation-repair-protein
MTPHAFAKEIKAVLAPHADAERALAMRAYMRHQFDFIGVPTPLRRQAVTPVFKRLPVQNAEHLLACANRLWTMPAREYQYVATDLLARNWKTLAVTDIAHLLTIAQHASWWDSIDPLAAVVGDVLKAARVQTPQAQAQAVMDAALQHESMWVRRIAMIHQLGWRGHTDEDRLFGYARSLAAESDFFIRKAIGWALRDYARHAPEAVSDFLSASRDLISPLTLREASKHLLPIR
>NZ_CP051515.1|WP_168791949.1|3608255_3610646_-|HAMP-domain-containing-protein
MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDVQLATMTLVYAPDANMVAQAQDDLKKKRTSLQQALALQAKDAASHAQKGLVSQANDSLENYFSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDDAISTLNTTLSTTTTAIAVVTGIAIILLTSIGSLLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRFDEIGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDIFETKDIAGRGLMDLVFADTDLGSDALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMTDGRVKILDLSWSAITDENDVIGRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEEKFHHFIESSAGFVSENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHETEQSYHELRQPDADRSWDQEHLMSELTRVREAIESYAKINEQSLGRKNKSLTNDAANSAHYVMVAKDHIQHTLSMLEQTNAGELHELQSMRDALRRTLRALGSESVRDALAGVLDSLPSLASELGKPAPDVRIDDNGYRLRGQAGGTLNNVFMHLLRNSMDHGIETAEARSAHGKVQAGAIEIDVGVDNGALQITLSDDGRGLALERIRGIAMERGWIGQDDTLSDEAIADFIFRPGFSTAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDRKGAAFRQFQTIVCLPDSVAVDTLGVEARGEAGALQLDAMVD
>NZ_CP051515.1|WP_168791948.1|3607475_3608210_-|chemotaxis-protein
MIQQYVLAVAAGSAVTALLAFAAHRLHSAKLTERLRAEAQASISRLEAERADHGAAIREREQAEQELHALTTQLREELAQQQSKADELRAALKAASEDKDQLAHQARQIAGEAERLKSLGATFERWHEQMISLMTQNHDMHAKNQELSSIVRHVVIVSLNASIEAARAGPAGRGFAVVASEVRALAARSEELSKSYRDSLHRNDLTTTSTFQDIQAGGKMIAASLASVESLAHQFHAKLHEVAA
>NZ_CP051515.1|WP_168791958.1|3621421_3621673_-|hypothetical-protein
MSSRIDKSSLVFDSIENDEHNRCVDLFLRSDSTYGFEEFRRDVEDGGAWTPVQYYSGAVFASKEEALDAAVKAVVWLADRVAR
>NZ_CP051515.1|WP_168791959.1|3622014_3622290_+|hypothetical-protein
MKSKLLAALLVAATTAFAAPAFASGYGPAPSYRPSVGAPASQRGQSAQTVAAERNDAVGSVNSSYGGVATSSSESGSRQPDQSLSRLYSGH
>NZ_CP051515.1|WP_168791960.1|3622333_3622687_+|superinfection-immunity-protein
MSKIIEGVAVLGALMLYLAPAMIADARERKDAFAVTMVNILLGWTVIGWFAALIWARHPVSDRRLKQFAKRAHRAVARITIDSIVARAECRGSSIRAFNPRLVPIVARIAASSGRRS
>NZ_CP051515.1|WP_168791961.1|3622910_3626606_-|hypothetical-protein
MHVSGVNQSCVTIGSNDLSTDEQNADSAASSSGAAQGSGRQRRVHAASPNGARGNGSARGRDDAGNHLQRTANDTGGTHEAQPNRRTGIALPADLMTNYRANLHAGQHACAARDVSTLSTGVVPAPGKANARNENHLGSVMPTALQHADESGNHGPRVKRGPALSRCIMDRGGDALAQNAVASERFDQRDYPETADAGRGLCGGMVREVMRRIDRAWSDQQTTTGSPNPPSSPLRSAVHDMRADAGASVPRRDMFGRIASFQIDSTTLGYSHYAPRPSITFKSSNEPRDSRISRFVVQMHSLLRNPNDIAHVQLSLESPTHKKDYGHAILIQMGRNNHYTIFDPNNGAFEYANWGNTEQALNRYLDSAFRIRSPFDELPSFRPGREYQVMPLRLQAYSPTPHANHTPARALAPQQGSAGYGPPEPDCEGQIYREHAASSNGLSLDTLFPGGAERSGLRSPAESLGSFVLRQVTGGVVTTLSGATNSLRGLSSNAGIRANFVERSNYFHGYYQWASTTDLANHIRHSGSDNIRTEDDLVSDLTTHFGEPYVSDSAPVPLRNDFVVIDLSLNPQAAGTSRRDPSRPIVVQRLNVDADVARDHYELYDPNFGAYTYNNFQDLSAAIRRIYATGYSADAGINHATTTWFAREAGIVTSSGRPPARDVSLAQLEQMGGPGPIAPLVPPRANLPAAPADNRPSLQDYVQHVELKRSSDSQSTTDPWVLFRPSTDTPNEVAKRGGFSAGNTPLRDVDLQMHNFDIASHDGETDSAGYLGTFGSPSAAIRRQRSQSADGYIYAVAPSPNMVSVDASLGRHTLKPENLEFAAMGYIDNTQILGWWRTQDLQQKGGASNYTLNPSFRWDVYGRTQTAGAQPQLARFPMSSPAWQEPAYKPFSSPVTRNGQQVGVAPKQDPNLTQAKFYLNAREKVHWVAIRQSAGKDYHGPTTLRAYGGQYPYILYADGQNNLYVYSESYASSTAGSTRQFSMGEDGRFHFANDYNKVLRVGHDDYLYVGAIPTDSQNLNGVFRHAGTNPSHLVHAEDGKYLTVGKSVATPFVTDYDAGYRSSWQLADPRGNKVTLPASNKNYHLQSTAGTREQLYEFDQDPDSMLPPGTTEFVTRLPLETFQGKFMDYIDYIQRTGTANQVIQELLSNNAAWIFPDGFYAVPTSLSRLEVRTLGGKPVWQATVNLDNGSESYQPLISGISSNFRINDDVWSELQSREKRGLELEDNLLGP
>NZ_CP051515.1|WP_168791962.1|3627461_3627980_-|hypothetical-protein
MHFRQINKHIRRTAVALVASLAAASTAHAGNWCEGGVWVDAMLGSYHINPDPNTHFEQFNPGLGVECWLNNQWALTAGGFRNSLRRPSYYGGGVWAPEFAHWGIVRIAAIGGIISGYNYGNWGIGRDHTIGPVVAPIVMVEYKRVGANFIVIPPIPSDNLPFTIGFQLKVKF
>NZ_CP051515.1|WP_168791963.1|3628190_3628670_-|nuclear-transport-factor-2-family-protein
MADSIETRPPLPPFTRETAIQKVRAAEDGWNTRDPERVSLAYTVDSVWRNRAEFTNGRAEIVGLLRRKWARELDYRLIKELWAFTDNRIAVRFAYEWHDDSNNWFRSYGNENWEFDEHGLMAHRHASINDMPIREADRLYHWPLGRRPDDHPSLSDLGL
>NZ_CP051515.1|WP_168791964.1|3629456_3630107_+|YceI-family-protein
MSTLTLRATFVRALLSATLLTAVACTPVQVLTHTVSQNETRVPPGHYEIDPDHCSITFDIDHFKYSRFTARFDRKTGELDWNEGGLDKSTASVTVDAASIDTNVPLLDKMVKSGNMLDVERYPEIRFVSTRFERTGESRGTLTGDLTIRGVTQPVTLDVTFNGFAPDPLTKNDTLGFSAEGHFSRAKFGLATWYPAVGDDIHVRIQAEFVKTPAGG
>NZ_CP051515.1|WP_012428787.1|3630194_3631226_-|L-threonine-3-dehydrogenase
MKALAKLERAPGLTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNREGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGEDVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRESLRDVMADLHMTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGIPPAQTAIDWTQVIFKGLEIKGIYGREMFETWYKMVAMLQSGLDLSPILTHHFKVDDYQEAFATMLSGESGKVILDWTAA
>NZ_CP051515.1|WP_168791965.1|3631239_3632439_-|glycine-C-acetyltransferase
MRDLYLAHLRGTLDQIRADGFYKNERVIASPQSAEIRLANGTGVLNFCANNYLGLAGDARLIDAAKQGLDNDGFGMASVRFICGTQTVHKDLENALAAFLQTDDCILYSSCFDANGGLFETLLDENDAIISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAKLVEAEAAGARFKLIATDGVFSMDGIIANLAGICDLADRYGALVMVDDSHAVGFVGEHGRGTPEHCGVLSRVDIITGTLGKALGGASGGYVAARKEVVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASDEGAQLRARVRENGAHFRSKMSALGFTLVPGEHPIIPVMLGDAQLASKMADALLKEGVYVIGFSFPVVPKGRARIRTQMSAAHTPEQIDRAVDAFARVGRELGVI
>NZ_CP051515.1|WP_168791966.1|3632588_3633227_+|helix-turn-helix-domain-containing-protein
MGQEMASSGIRRAAANAAPTSGATSVPAVAAPPRVGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLFAPQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNAHEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAIRNAGKGEAKALLVVIHG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP051515_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051515_5

3621267-3621403

Orphan

Consensus_repeat	Method
GTTATCTCCTGGAATTCCTCACC	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP051515_5

>merge|NZ_CP051515|5|3621267-3621403|CRISPRCasFinder
TCTGTCTCCTGGAAAGCTTCACCGTTAAACGCGATGAAGTTATCTCCTGGAATTCCTCACCTTTGATCGTGGTGGCGCCATCTCCTGGAATTCCTCACCATTCATCGGTGCGGCGCTATCTCCTGGAATTCCTCACC

>NZ_CP051515|5|5|3621267-3621403|CRISPRCasFinder
TCTGTCTCCTGGAAAGCTTCACC	GTTAAACGCGATGAA
GTTATCTCCTGGAATTCCTCACC	TTTGATCGTGGTGGC
GCCATCTCCTGGAATTCCTCACC	ATTCATCGGTGCGGC
GCTATCTCCTGGAATTCCTCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051515.1\|WP_168791958.1\|3621421_3621673_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|184990
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP051515.1\|WP_168791963.1\|3628190_3628670_-\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|273335
NZ_CP051515.1\|WP_168791959.1\|3622014_3622290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|340393
NZ_CP051515.1\|WP_012428787.1\|3630194_3631226_-\|L-threonine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|180054
NZ_CP051515.1\|WP_168791962.1\|3627461_3627980_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791951.1\|3611634_3612042_-\|DUF1398-domain-containing-protein	unknown	unknown	unknown
NZ_CP051515.1\|WP_168791965.1\|3631239_3632439_-\|glycine-C-acetyltransferase	unknown	unknown	gnl\|CDD\|235893
NZ_CP051515.1\|WP_168791961.1\|3622910_3626606_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366600
NZ_CP051515.1\|WP_168791956.1\|3619204_3620452_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|236531
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|132881
NZ_CP051515.1\|WP_168791966.1\|3632588_3633227_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|380339
NZ_CP051515.1\|WP_168791957.1\|3620536_3620737_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240227
NZ_CP051515.1\|WP_168791955.1\|3618480_3619221_+\|response-regulator	unknown	unknown	gnl\|CDD\|181883
NZ_CP051515.1\|WP_168791960.1\|3622333_3622687_+\|superinfection-immunity-protein	unknown	unknown	gnl\|CDD\|379585
NZ_CP051515.1\|WP_168791964.1\|3629456_3630107_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|377274

Protein	Function_ID	Function_description	E-value
NZ_CP051515.1\|WP_168791954.1\|3616900_3618130_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|184990	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA.	8.8058e-115
NZ_CP051515.1\|WP_168791952.1\|3612266_3613700_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.27527e-107
NZ_CP051515.1\|WP_168791963.1\|3628190_3628670_-\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	6.32049e-99
NZ_CP051515.1\|WP_168791948.1\|3607475_3608210_-\|chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.64301e-12
NZ_CP051515.1\|WP_168791953.1\|3613696_3616888_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|273335	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family. Proteins scoring above the trusted cutoff (1000) form a tight clade within the RND (Resistance-Nodulation-Cell Division) superfamily. Proteins scoring greater than the noise cutoff (100) appear to form a larger clade, cleanly separated from more distant homologs that include cadmium/zinc/cobalt resistance transporters. This family is one of several subfamilies within the scope of pfam00873. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Unknown substrate].	0
NZ_CP051515.1\|WP_168791949.1\|3608255_3610646_-\|HAMP-domain-containing-protein	gnl\|CDD\|340393	cd16916, HATPase_CheA-like, Histidine kinase-like ATPase domain of the chemotaxis protein histidine kinase CheA, and some hybrid sensor histidine kinases. This family includes the cytoplasmic histidine kinase (HK) CheA, a transmembrane receptor which, together with cytoplasmic adaptor protein (CheW), forms the lattice at the core of the chemosensory array that controls the cellular chemotaxis of motile bacteria and archaea. CheA forms a two-component signal transduction system (TCS) with the response regulator CheY. Proteins having this CheA-like HATPase domain generally also have a histidine-phosphotransfer domain, a histidine kinase homodimeric domain, and a regulatory domain; some are hybrid sensor histidine kinases as they contain a REC signal receiver domain.	2.58298e-43
NZ_CP051515.1\|WP_168791965.1\|3631239_3632439_-\|glycine-C-acetyltransferase	gnl\|CDD\|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0
NZ_CP051515.1\|WP_012428787.1\|3630194_3631226_-\|L-threonine-3-dehydrogenase	gnl\|CDD\|180054	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated.	0
NZ_CP051515.1\|WP_168791961.1\|3622910_3626606_-\|hypothetical-protein	gnl\|CDD\|366600	pfam01375, Enterotoxin_a, Heat-labile enterotoxin alpha chain.	1.59171e-28
NZ_CP051515.1\|WP_168791956.1\|3619204_3620452_+\|HAMP-domain-containing-protein	gnl\|CDD\|236531	PRK09467, envZ, osmolarity sensor protein; Provisional.	1.13216e-44
NZ_CP051515.1\|WP_168791950.1\|3610936_3611638_-\|DNA-alkylation-repair-protein	gnl\|CDD\|132881	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity. The known structures for members of this family, AlkC and AlkD from Bacillus cereus, are distant homologues and are composed of six variant HEAT (Huntington/Elongation/ A subunit/Target of rapamycin) repeats. HEAT motifs are ~45-amino acid sequences that form antiparallel alpha-helices, which are packed by a conserved hyrophobic interface and are tandemly repeated to form superhelical alpha-structures. AlkD and AlkC are specific for removal of 3-methyladenine (3mA) and 7-methylguanine (7mG) from the DNA by base excision repair. Homologues of AlkC and AlkD were also identified in other organisms.	1.59247e-91
NZ_CP051515.1\|WP_168791966.1\|3632588_3633227_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.21997e-17
NZ_CP051515.1\|WP_168791957.1\|3620536_3620737_-\|hypothetical-protein	gnl\|CDD\|240227	PTZ00009, PTZ00009, heat shock 70 kDa protein; Provisional.	0.000131838
NZ_CP051515.1\|WP_168791955.1\|3618480_3619221_+\|response-regulator	gnl\|CDD\|181883	PRK09468, ompR, osmolarity response regulator; Provisional.	4.11379e-98
NZ_CP051515.1\|WP_168791960.1\|3622333_3622687_+\|superinfection-immunity-protein	gnl\|CDD\|379585	pfam14373, Imm_superinfect, Superinfection immunity protein. This family includes the E. coli bacteriophage T4 superinfection immunity (imm) protein. When E. coli is sequentially infected with two T-even type bacteriophage the DNA of the superinfecting phage is excluded from the host, into the periplasmic space. The immunity protein plays a role in this process.	1.01172e-14
NZ_CP051515.1\|WP_168791964.1\|3629456_3630107_+\|YceI-family-protein	gnl\|CDD\|377274	pfam04264, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to poly-isoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	1.73245e-51

>NZ_CP051515.1|WP_168791957.1|3620536_3620737_-|hypothetical-protein
MKKLLAIAALAALSATLSGCWWGPPPGWGGGGQGHGGPGGGPGGGGPGGGDGPHGAIVVPGNVAQA
>NZ_CP051515.1|WP_168791956.1|3619204_3620452_+|HAMP-domain-containing-protein
MTNPFNTLFGRLSLMTVSLIVLVHITAMLLVDRERGQIDTGHARQALLLAVQAEHDGALAASHVSAILGVSYVKTNDAIAAGCPAPCENTSGPFERDLRAKLPPGSQVVADADDGTVWVHYAGYSDWLKLQNSMLPARRFLGASATMLVLAVIIALVGAWHLQRPLHRLALAAREFRVGHRAPVVEASGPRELKELIGDFNQMVHELAQAEQERAVMLAGVAHDLRAPITRMQVRADLLPDEANRRGFLRDAESLSRIVTQFLDFARETADTSPRTNVDAHCRRHYGDSLADDALVRLNLHAGDGFELPLVDLDRILTNLIENALTYGEPPVEISTSRHNGRFTLEVRDHGSGIPGGQLDRALQPFVRLDEARSGDAHCGLGLAIVRRLVRYNSGAFHADNAADGGFVVSMTFPA
>NZ_CP051515.1|WP_168791955.1|3618480_3619221_+|response-regulator
MSDTPIQVLLVDDDADLRDLLRTFFQQRGIEMSVLHDANHLARRLERERPSIIVLDLMMPGIDGLSALKQLRANGDTIPVIMLTARADGVDRVVGLELGADDYLGKPFMPQELLARIHAVLRRHAQPAPAAAAPVEKREALRFGRFRLDFASRTLFRDDEPLKLTGSEYALLEVLAQHPMETLSRSKLVDLLHGPYSEVTERGIDVPVWRLRRLLEEDPANPRLIQTLRGTGYMFVPGGSDDDQSL
>NZ_CP051515.1|WP_168791954.1|3616900_3618130_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MPTLSIAVEPSRRAPAFTLLAAAVAVATFMLSGCGEQTSHGPMQSVPEVSVETITPHTVVSSTELSGRLSAIRVAEVRPQVEGIVRKRLFTEGSQVAADAVLYQIDASSYQATYDQAVGTLAKAVATANAAQTKAARYAELSKIQGVSRQDYDDAVAALDEAKADVVADRAALKTAAINLGYTKVVAPIAGRIGKSSVTEGALVTAEQTTALATVQATTEMYLDVTRSSADWLRLQKEFASGQLQQSGTDGAVVHLVMEDGSTYAQPGKLLFSDITVDATTGSVTLRCVFPNPDGVLLPGMFVRARLEEGVNQQAITVPQLAVSRASDGSASVLTVGADNKVAQTAVTADTASGSDWLVTSGLKAGDRVIVAGSQKARTGAVVKPVESPGTSGTSGAPATADNTSAAHS
>NZ_CP051515.1|WP_168791953.1|3613696_3616888_-|efflux-RND-transporter-permease-subunit
MAGFFINRPILAWVIAIVIMMIGGASIGTLPVEQYPSVAPVSVQITATYPGASAETIATTVTQVIEQKLSGIDHLLYMSSTSSSSGQARITLTFQQGTNADIAQVQVQNKVEQASSSLPETVQEQGVQVAKAANAFLMIVSLSSTDGSMNSIDLGNIIATQIEDPLTQIDGVGDVTLFGAQHAMRIWLDPVKLQALGLTTADVTTAITNQNVQLSVGQVGGSPSTKTQAINATISASSLLTTPVQFGAILLRVNSDGSKVMLKDVARVEVGGDDYSTDSRLNGKPAASLAVKLASGANAMSVAKAVRAKLDEMSGQLPRNVVVDYPYDTTPFVKISIEEVVKTLVEAVMLVFVVMYVFLQNLRATLIPTIVVPVALLGTFAVMSLVGFSINVLSMFGLVLAIGLLVDDAIVVVENVERLIAEEGLSPVEATRKAMKQITGALVGITTVLIAVFIPMAFFSGSTGAIYRQFSVTIVAAMLLSVFLALTLTPALCATLLRRTDVEHHAKRGVFGWFNRVLARGTDRYDSAVSRVIGNPMRYMVIYVLIAGVVALLFMKLPSSYLPDDDQGIIITSISAPVGTPAAQTLETVKKVEAYYLGLPQVDKIIALTGFSFNGSGQNNALTFVKLKDWSTRRGKDGSASALIQHANMHFAATRDAQIFALNPPAIQELGTQSGLDFELEDRAGQGHDKLMAARQQLIALAAKDSALSGMRPGGLDDTPQFHVDIDREKASALGLSIADVNDTLQTAFGSSYVNNYVDTGRIQKVYVQADAPYRMMPSDIGRWYVRSSTTSTSTSTTTAASGTSSTTTSGYDGEMVPFSAFATGKWTFGPPQIERFNRTLAMEITAQTGANTSTGQAMDAVDALVKKLPAGYGIDWTGQSYQERIAGSQAIYLYAISLIVVFLCLAGLYESWSIPIAVILVVPLGVLGAVLGAHIRGLSDDIYFKVGLLATIGLSTKNAILIVEFAKDLQAQGRGLIEATIEAARLRLRPILMTSLAFIFGVLPLVISSGAGSASRHAIGTGVMGGMIAATFLAIFFVPVFFVVVRRLFGEHGDPKQQEGVE
>NZ_CP051515.1|WP_168791952.1|3612266_3613700_-|efflux-transporter-outer-membrane-subunit
MMRLKLGACAVACALAVLAGCTLDPHYERPAAPVAVAYPQGDAYESTSAAAAAKSASGTAATSPLAIDTAWRDFFRDERLERLIEIALANNRDMRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQGVTSSASDLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATVATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLASYRRAVAQDRNNLVAVLGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIVQAEHALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSNKASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVQADREYVASSQRYYTLAEARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLGGGWEQG
>NZ_CP051515.1|WP_168791951.1|3611634_3612042_-|DUF1398-domain-containing-protein
MPARLDEASRRVAEDCAQRSHNGTIDFGSVVRALGEAGIESYFTDYRRGEHTYYAPGGETHVIALPLPDVAIANAFDADAVNQAVRGAQNGAVKYAEFVRRTLTAGCVGYFVWIAGRQVQYFGRRGEVHVERFPQ
>NZ_CP051515.1|WP_168791950.1|3610936_3611638_-|DNA-alkylation-repair-protein
MTPHAFAKEIKAVLAPHADAERALAMRAYMRHQFDFIGVPTPLRRQAVTPVFKRLPVQNAEHLLACANRLWTMPAREYQYVATDLLARNWKTLAVTDIAHLLTIAQHASWWDSIDPLAAVVGDVLKAARVQTPQAQAQAVMDAALQHESMWVRRIAMIHQLGWRGHTDEDRLFGYARSLAAESDFFIRKAIGWALRDYARHAPEAVSDFLSASRDLISPLTLREASKHLLPIR
>NZ_CP051515.1|WP_168791949.1|3608255_3610646_-|HAMP-domain-containing-protein
MTIRHRITLLVVLMFVALSAIGGYAVYQTRGSAAEVRKVTEGVVPSALASADLVSQVKDVQLATMTLVYAPDANMVAQAQDDLKKKRTSLQQALALQAKDAASHAQKGLVSQANDSLENYFSAIAETAKMKADGKNELAQAYLFANVAQYRDELEGIVETLRVEKNREKDDAISTLNTTLSTTTTAIAVVTGIAIILLTSIGSLLYRQITRPLSRMQAMMSEIASSQDFTRRVPVGRFDEIGHSIVAFNGMIEKIQESSAQLKQKTADIQAMLQNMQQGILTVIDGAVIHAEYSAYLEDIFETKDIAGRGLMDLVFADTDLGSDALSQVDAAAHACLGEDCINFAFNQHLLVGEISKRMTDGRVKILDLSWSAITDENDVIGRLMLCVRDVTELRKLAAEASEQRRRLDMIGEILAVSEEKFHHFIESSAGFVSENERIIRKHSEADHAAIAELFRNMHTIKGNARTYNLQHLTNVVHETEQSYHELRQPDADRSWDQEHLMSELTRVREAIESYAKINEQSLGRKNKSLTNDAANSAHYVMVAKDHIQHTLSMLEQTNAGELHELQSMRDALRRTLRALGSESVRDALAGVLDSLPSLASELGKPAPDVRIDDNGYRLRGQAGGTLNNVFMHLLRNSMDHGIETAEARSAHGKVQAGAIEIDVGVDNGALQITLSDDGRGLALERIRGIAMERGWIGQDDTLSDEAIADFIFRPGFSTAETVTELSGRGVGMDAVRDFLKRANGSIELRFTDDRKGAAFRQFQTIVCLPDSVAVDTLGVEARGEAGALQLDAMVD
>NZ_CP051515.1|WP_168791948.1|3607475_3608210_-|chemotaxis-protein
MIQQYVLAVAAGSAVTALLAFAAHRLHSAKLTERLRAEAQASISRLEAERADHGAAIREREQAEQELHALTTQLREELAQQQSKADELRAALKAASEDKDQLAHQARQIAGEAERLKSLGATFERWHEQMISLMTQNHDMHAKNQELSSIVRHVVIVSLNASIEAARAGPAGRGFAVVASEVRALAARSEELSKSYRDSLHRNDLTTTSTFQDIQAGGKMIAASLASVESLAHQFHAKLHEVAA
>NZ_CP051515.1|WP_168791958.1|3621421_3621673_-|hypothetical-protein
MSSRIDKSSLVFDSIENDEHNRCVDLFLRSDSTYGFEEFRRDVEDGGAWTPVQYYSGAVFASKEEALDAAVKAVVWLADRVAR
>NZ_CP051515.1|WP_168791959.1|3622014_3622290_+|hypothetical-protein
MKSKLLAALLVAATTAFAAPAFASGYGPAPSYRPSVGAPASQRGQSAQTVAAERNDAVGSVNSSYGGVATSSSESGSRQPDQSLSRLYSGH
>NZ_CP051515.1|WP_168791960.1|3622333_3622687_+|superinfection-immunity-protein
MSKIIEGVAVLGALMLYLAPAMIADARERKDAFAVTMVNILLGWTVIGWFAALIWARHPVSDRRLKQFAKRAHRAVARITIDSIVARAECRGSSIRAFNPRLVPIVARIAASSGRRS
>NZ_CP051515.1|WP_168791961.1|3622910_3626606_-|hypothetical-protein
MHVSGVNQSCVTIGSNDLSTDEQNADSAASSSGAAQGSGRQRRVHAASPNGARGNGSARGRDDAGNHLQRTANDTGGTHEAQPNRRTGIALPADLMTNYRANLHAGQHACAARDVSTLSTGVVPAPGKANARNENHLGSVMPTALQHADESGNHGPRVKRGPALSRCIMDRGGDALAQNAVASERFDQRDYPETADAGRGLCGGMVREVMRRIDRAWSDQQTTTGSPNPPSSPLRSAVHDMRADAGASVPRRDMFGRIASFQIDSTTLGYSHYAPRPSITFKSSNEPRDSRISRFVVQMHSLLRNPNDIAHVQLSLESPTHKKDYGHAILIQMGRNNHYTIFDPNNGAFEYANWGNTEQALNRYLDSAFRIRSPFDELPSFRPGREYQVMPLRLQAYSPTPHANHTPARALAPQQGSAGYGPPEPDCEGQIYREHAASSNGLSLDTLFPGGAERSGLRSPAESLGSFVLRQVTGGVVTTLSGATNSLRGLSSNAGIRANFVERSNYFHGYYQWASTTDLANHIRHSGSDNIRTEDDLVSDLTTHFGEPYVSDSAPVPLRNDFVVIDLSLNPQAAGTSRRDPSRPIVVQRLNVDADVARDHYELYDPNFGAYTYNNFQDLSAAIRRIYATGYSADAGINHATTTWFAREAGIVTSSGRPPARDVSLAQLEQMGGPGPIAPLVPPRANLPAAPADNRPSLQDYVQHVELKRSSDSQSTTDPWVLFRPSTDTPNEVAKRGGFSAGNTPLRDVDLQMHNFDIASHDGETDSAGYLGTFGSPSAAIRRQRSQSADGYIYAVAPSPNMVSVDASLGRHTLKPENLEFAAMGYIDNTQILGWWRTQDLQQKGGASNYTLNPSFRWDVYGRTQTAGAQPQLARFPMSSPAWQEPAYKPFSSPVTRNGQQVGVAPKQDPNLTQAKFYLNAREKVHWVAIRQSAGKDYHGPTTLRAYGGQYPYILYADGQNNLYVYSESYASSTAGSTRQFSMGEDGRFHFANDYNKVLRVGHDDYLYVGAIPTDSQNLNGVFRHAGTNPSHLVHAEDGKYLTVGKSVATPFVTDYDAGYRSSWQLADPRGNKVTLPASNKNYHLQSTAGTREQLYEFDQDPDSMLPPGTTEFVTRLPLETFQGKFMDYIDYIQRTGTANQVIQELLSNNAAWIFPDGFYAVPTSLSRLEVRTLGGKPVWQATVNLDNGSESYQPLISGISSNFRINDDVWSELQSREKRGLELEDNLLGP
>NZ_CP051515.1|WP_168791962.1|3627461_3627980_-|hypothetical-protein
MHFRQINKHIRRTAVALVASLAAASTAHAGNWCEGGVWVDAMLGSYHINPDPNTHFEQFNPGLGVECWLNNQWALTAGGFRNSLRRPSYYGGGVWAPEFAHWGIVRIAAIGGIISGYNYGNWGIGRDHTIGPVVAPIVMVEYKRVGANFIVIPPIPSDNLPFTIGFQLKVKF
>NZ_CP051515.1|WP_168791963.1|3628190_3628670_-|nuclear-transport-factor-2-family-protein
MADSIETRPPLPPFTRETAIQKVRAAEDGWNTRDPERVSLAYTVDSVWRNRAEFTNGRAEIVGLLRRKWARELDYRLIKELWAFTDNRIAVRFAYEWHDDSNNWFRSYGNENWEFDEHGLMAHRHASINDMPIREADRLYHWPLGRRPDDHPSLSDLGL
>NZ_CP051515.1|WP_168791964.1|3629456_3630107_+|YceI-family-protein
MSTLTLRATFVRALLSATLLTAVACTPVQVLTHTVSQNETRVPPGHYEIDPDHCSITFDIDHFKYSRFTARFDRKTGELDWNEGGLDKSTASVTVDAASIDTNVPLLDKMVKSGNMLDVERYPEIRFVSTRFERTGESRGTLTGDLTIRGVTQPVTLDVTFNGFAPDPLTKNDTLGFSAEGHFSRAKFGLATWYPAVGDDIHVRIQAEFVKTPAGG
>NZ_CP051515.1|WP_012428787.1|3630194_3631226_-|L-threonine-3-dehydrogenase
MKALAKLERAPGLTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNREGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGEDVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRESLRDVMADLHMTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGIPPAQTAIDWTQVIFKGLEIKGIYGREMFETWYKMVAMLQSGLDLSPILTHHFKVDDYQEAFATMLSGESGKVILDWTAA
>NZ_CP051515.1|WP_168791965.1|3631239_3632439_-|glycine-C-acetyltransferase
MRDLYLAHLRGTLDQIRADGFYKNERVIASPQSAEIRLANGTGVLNFCANNYLGLAGDARLIDAAKQGLDNDGFGMASVRFICGTQTVHKDLENALAAFLQTDDCILYSSCFDANGGLFETLLDENDAIISDELNHASIIDGVRLSKAKRFRYKNNDLADLEAKLVEAEAAGARFKLIATDGVFSMDGIIANLAGICDLADRYGALVMVDDSHAVGFVGEHGRGTPEHCGVLSRVDIITGTLGKALGGASGGYVAARKEVVELLRQRSRPYLFSNTLTPSIAAASLKVLELLASDEGAQLRARVRENGAHFRSKMSALGFTLVPGEHPIIPVMLGDAQLASKMADALLKEGVYVIGFSFPVVPKGRARIRTQMSAAHTPEQIDRAVDAFARVGRELGVI
>NZ_CP051515.1|WP_168791966.1|3632588_3633227_+|helix-turn-helix-domain-containing-protein
MGQEMASSGIRRAAANAAPTSGATSVPAVAAPPRVGEQIQRLRAERRMTLDDLSRAAGVSKSMLSEIERDKANPTIAVAWRLTNALGVSLDSLFAPQKTPEAIAVSGPHEIPTLSGHDAKYQLRVWGPIELAGKFEWYELTLQPGGALVSNAHEPGTREHLTVLQGSIEIEAAGTTKRLKAADTARYVADEPHAIRNAGKGEAKALLVVIHG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	657257-657281	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	383482-383506	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	383532-383556	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	2831317-2831341	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	441913-441937	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	441962-441986	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	1987328-1987352	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	2917197-2917221	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	352393-352417	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	2157840-2157864	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	2817595-2817619	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051515.1	3527520-3527544	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	1954727-1954751	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2079066-2079090	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2079115-2079139	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2079164-2079188	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2079213-2079237	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	3138275-3138299	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	1644214-1644238	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2825863-2825887	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	3194945-3194969	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	1395401-1395425	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2694016-2694040	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2742874-2742898	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	98663-98687	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2433087-2433111	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP051516.1	2771101-2771125	2	0.92

1. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 657257-657281, mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

2. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 383482-383506, mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

3. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 383532-383556, mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

4. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2831317-2831341, mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

5. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 441913-441937, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

6. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 441962-441986, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

7. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 1987328-1987352, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccggagttggcgctttagcg	Protospacer
*******.*****************

8. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2917197-2917221, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccggagtttgcgctttagcg	Protospacer
*******.***** ***********

9. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 352393-352417, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccggagttggcgcttcagcg	Protospacer
*******.************.****

10. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2157840-2157864, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagattgggcgctttagcg	Protospacer
********** * ************

11. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2817595-2817619, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcggagttggcgctttagcg	Protospacer
*****.*.*****************

12. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 3527520-3527544, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgacctgagttagcgctttagcg	Protospacer
******* *****.***********

13. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 1954727-1954751, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgttttagcg	Protospacer
*****************.*******

14. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2079066-2079090, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

15. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2079115-2079139, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

16. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2079164-2079188, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

17. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2079213-2079237, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

18. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 3138275-3138299, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagtcggcgctttagcg	Protospacer
************.************

19. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 1644214-1644238, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcagagttggcgctttagcg	Protospacer
*****.*******************

20. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2825863-2825887, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttagcgctttagcg	Protospacer
*************.***********

21. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 3194945-3194969, mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgcttcagcg	Protospacer
********************.****

22. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 1395401-1395425, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttcgcgctttggcg	Protospacer
************* *******.***

23. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2694016-2694040, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgacccgagttggcgctttggcg	Protospacer
******* *************.***

24. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2742874-2742898, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagtgggcgcttcagcg	Protospacer
************ *******.****

25. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 98663-98687, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcagagttggcgcttaagcg	Protospacer
*****.************** ****

26. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2433087-2433111, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccggagttcgcgctttagcg	Protospacer
*******.***** ***********

27. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to position: 2771101-2771125, mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccggagttggcgcttcagcg	Protospacer
*******.************.****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049317	Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence	1040809-1040833	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049157	Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence	601862-601886	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1412243-1412267	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1416911-1416935	0	1.0
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1079639-1079663	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1084319-1084343	1	0.96
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258599-1258623	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263268-1263292	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445492-445516	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445541-445565	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445590-445614	2	0.92
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258695-1258719	3	0.88
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263364-1263388	3	0.88
NZ_CP051515_1	1.1\|2831367\|25\|NZ_CP051515\|CRISPRCasFinder	2831367-2831391	25	NZ_CP017563	Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence	220701-220725	3	0.88
NZ_CP051515_4	4.1\|3621107\|32\|NZ_CP051515\|CRISPRCasFinder	3621107-3621138	32	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	30059-30090	10	0.688
NZ_CP051515_4	4.1\|3621107\|32\|NZ_CP051515\|CRISPRCasFinder	3621107-3621138	32	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	163674-163705	10	0.688

1. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049317 (Caballeronia sp. SBC2 plasmid pSBC2-1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

2. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049157 (Caballeronia sp. SBC1 plasmid pSBC1_1, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

3. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

4. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 0, identity: 1.0

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgctttagcg	Protospacer
*************************

5. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgcttcagcg	Protospacer
********************.****

6. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 1, identity: 0.96

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgaccagagttggcgcttcagcg	Protospacer
********************.****

7. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcggagttggcgctttagcg	Protospacer
*****.*.*****************

8. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcggagttggcgctttagcg	Protospacer
*****.*.*****************

9. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgacgagagttagcgctttagcg	Protospacer
****** ******.***********

10. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgacgagagttagcgctttagcg	Protospacer
****** ******.***********

11. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 2, identity: 0.92

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgacgagagttagcgctttagcg	Protospacer
****** ******.***********

12. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgaccagagttggcgctttagcg	CRISPR spacer
ctcgatcggagttggcgctttagcg	Protospacer
 ****.*.*****************

13. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgaccagagttggcgctttagcg	CRISPR spacer
ctcgatcggagttggcgctttagcg	Protospacer
 ****.*.*****************

14. spacer 1.1|2831367|25|NZ_CP051515|CRISPRCasFinder matches to NZ_CP017563 (Paraburkholderia sprentiae WSM5005 plasmid pl1WSM5005, complete sequence) position: , mismatch: 3, identity: 0.88

gtcgaccagagttggcgctttagcg	CRISPR spacer
gtcgatcagagttagcgctttagag	Protospacer
*****.*******.********* *

15. spacer 4.1|3621107|32|NZ_CP051515|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 10, identity: 0.688

ttatcttcggtgcggattcagcgcggcgttga	CRISPR spacer
tgccgctcgctgcggatgcagcgcggcgtcac	Protospacer
*  . .*** ******* ***********..

16. spacer 4.1|3621107|32|NZ_CP051515|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 10, identity: 0.688

ttatcttcggtgcggattcagcgcggcgttga	CRISPR spacer
tgccgctcgctgcggatgcagcgcggcgtcac	Protospacer
*  . .*** ******* ***********..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1854141 : 1865423

Bacillus_phage(50.0%)

tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_168790607.1\|1854141_1857078_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_168790608.1\|1857074_1857491_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_168790609.1\|1857567_1858215_-\|tail	phage tail protein	NA	NA	NA	NA
WP_168790610.1\|1858211_1859282_-	phage late control D family protein	NA	NA	NA	NA
WP_168790611.1\|1859278_1860004_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_168790612.1\|1859994_1860957_-	hypothetical protein	NA	NA	NA	NA
WP_168790613.1\|1861693_1861933_+	hypothetical protein	NA	NA	NA	NA
WP_168790614.1\|1862693_1863125_-\|tail	phage tail protein	NA	NA	NA	NA
WP_168790615.1\|1863304_1863673_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_168790616.1\|1863669_1864116_-\|tail	phage tail protein	J9PV93	Bacillus_phage	1.7e-21	38.2
WP_168790617.1\|1864130_1865423_-\|tail	phage tail sheath family protein	A0A1C3NFK8	Phage_NCTB	8.5e-10	27.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051516

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP051514

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP051515

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection