CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP051643	Staphylococcus caprae strain SY333 chromosome, complete genome	7 crisprs	cas3,DinG,DEDDh,WYL,csa3	2	2	9
NZ_CP051648	Staphylococcus caprae strain SY333 plasmid pSY333-45, complete sequence	0 crisprs	NA	0	0	0
NZ_CP051646	Staphylococcus caprae strain SY333 plasmid pSY333-7, complete sequence	0 crisprs	NA	0	0	0
NZ_CP051645	Staphylococcus caprae strain SY333 plasmid pSY333-41, complete sequence	0 crisprs	csa3	0	0	4
NZ_CP051644	Staphylococcus caprae strain SY333 plasmid pSY333-92, complete sequence	0 crisprs	NA	0	0	0
NZ_CP051647	Staphylococcus caprae strain SY333 plasmid pSY333-2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 6322

Staphylococcus_phage(75.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011152955.1\|248_1001_+	ABC transporter permease	NA	NA	NA	NA
WP_046466873.1\|997_1735_+	ABC transporter permease	NA	NA	NA	NA
WP_002485209.1\|2128_2329_-	hypothetical protein	NA	NA	NA	NA
WP_012818111.1\|2334_3129_-	ParA family protein	F0PIG8	Enterococcus_phage	5.0e-29	35.6
WP_002441908.1\|3937_4189_-	hypothetical protein	NA	NA	NA	NA
WP_170081009.1\|4301_4697_-	arsenate reductase (thioredoxin)	A0A2H4PQT9	Staphylococcus_phage	1.7e-57	81.2
WP_002441913.1\|4715_6008_-	arsenite efflux transporter membrane subunit ArsB	A0A2H4PQU3	Staphylococcus_phage	4.0e-185	80.5
WP_002441914.1\|6007_6322_-	winged helix-turn-helix transcriptional regulator	A0A2H4PQT4	Staphylococcus_phage	2.1e-31	61.5

DBSCAN-SWA_2

10559 : 14264

uncultured_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002441927.1\|10559_10880_+	winged helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	2.0e-05	38.8
WP_170081012.1\|10968_11853_+	permease	NA	NA	NA	NA
WP_002441931.1\|11866_12001_+	hypothetical protein	NA	NA	NA	NA
WP_030062665.1\|12120_12888_-	DUF536 domain-containing protein	NA	NA	NA	NA
WP_037551369.1\|13328_14264_+	replication initiator protein A	Q9MCM7	Streptococcus_virus	1.9e-19	47.1

DBSCAN-SWA_3

21909 : 32853

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145376072.1\|21909_22584_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.2e-126	98.7
WP_145376082.1\|22873_24118_+	peptidoglycan bridge formation glycyltransferase FemA/FemB family protein	NA	NA	NA	NA
WP_152333551.1\|24392_25533_+\|transposase	IS3 family transposase	A0A0N9SIX5	Staphylococcus_phage	2.0e-71	97.1
WP_170081015.1\|25792_26044_-	DUF334 domain-containing protein	NA	NA	NA	NA
WP_170081016.1\|26109_26784_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.2e-126	98.2
WP_002436855.1\|27273_27846_-	alkylmercury lyase	NA	NA	NA	NA
WP_002436871.1\|28197_29043_-	penicillin-hydrolyzing class A beta-lactamase BlaZ	A0A1B0VBP7	Salmonella_phage	7.5e-31	33.7
WP_002436863.1\|29149_30907_+	beta-lactam sensor/signal transducer BlaR1	NA	NA	NA	NA
WP_002436859.1\|30896_31277_+	penicillinase repressor BlaI	NA	NA	NA	NA
WP_049326568.1\|31540_32116_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	2.1e-40	50.6
WP_011152949.1\|32244_32853_+	recombinase family protein	I1ZBD6	Salisaeta_icosahedral_phage	3.2e-15	31.1

DBSCAN-SWA_4

38494 : 40579

Aureococcus_anophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046466871.1\|38494_40579_+	ATP-binding cassette domain-containing protein	A0A076FI99	Aureococcus_anophage	4.9e-15	25.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP051643

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP051643_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_1

203846-203968

Orphan

Consensus_repeat	Method
ATTAAGCGGGAGTAGTTCAACTCTTAGAACAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_1

>merge|NZ_CP051643|1|203846-203968|CRISPRCasFinder
ATTAAGCGGGAGTAGTTCAACTCTTAGAACACATTCCTTCCCGGAATGAGATATAGGTGCAAGTCCTATCTTCCGCTCCATTAAATTTTATATTAAGCGGGAGTAGTTCAACTTTTAGAACAC

>NZ_CP051643|1|1|203846-203968|CRISPRCasFinder
ATTAAGCGGGAGTAGTTCAACTCTTAGAACAC	ATTCCTTCCCGGAATGAGATATAGGTGCAAGTCCTATCTTCCGCTCCATTAAATTTTAT
ATTAAGCGGGAGTAGTTCAACTTTTAGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_002443573.1\|209069_209792_+\|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224051
NZ_CP051643.1\|WP_002445508.1\|191243_192338_-\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|226614
NZ_CP051643.1\|WP_049402038.1\|207619_209077_+\|ABC-transporter-substrate-binding-protein/permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP051643.1\|WP_037541849.1\|195701_196157_+\|peroxide-responsive-transcriptional-repressor-PerR	unknown	unknown	gnl\|CDD\|223806
NZ_CP051643.1\|WP_002443571.1\|209951_211079_+\|tRNA-epoxyqueuosine(34)-reductase-QueG	unknown	unknown	gnl\|CDD\|272993
NZ_CP051643.1\|WP_002445503.1\|186306_187284_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP051643.1\|WP_002445512.1\|194194_194650_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP051643.1\|WP_002443566.1\|212355_212535_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002443584.1\|204803_205541_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002445510.1\|192821_194114_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP051643.1\|WP_037541523.1\|211731_212331_+\|glucosamine-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|223440
NZ_CP051643.1\|WP_170080833.1\|194655_195606_+\|hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240632
NZ_CP051643.1\|WP_002443579.1\|206418_207477_+\|PTS-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226167
NZ_CP051643.1\|WP_002443564.1\|212770_213169_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002443570.1\|211081_211552_+\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	unknown	unknown	gnl\|CDD\|349967
NZ_CP051643.1\|WP_002445506.1\|189408_191145_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP051643.1\|WP_002445499.1\|183636_185154_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224057
NZ_CP051643.1\|WP_002443581.1\|205752_206073_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP051643.1\|WP_002445504.1\|187436_188480_+\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP051643.1\|WP_002445505.1\|188583_189126_+\|DUF402-domain-containing-protein	unknown	unknown	gnl\|CDD\|184219

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_002443573.1\|209069_209792_+\|amino-acid-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	6.65838e-152
NZ_CP051643.1\|WP_002445508.1\|191243_192338_-\|aromatic-acid-exporter-family-protein	gnl\|CDD\|226614	COG4129, COG4129, Predicted membrane protein [Function unknown].	2.84888e-70
NZ_CP051643.1\|WP_049402038.1\|207619_209077_+\|ABC-transporter-substrate-binding-protein/permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.9632e-97
NZ_CP051643.1\|WP_037541849.1\|195701_196157_+\|peroxide-responsive-transcriptional-repressor-PerR	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	5.06473e-55
NZ_CP051643.1\|WP_002443571.1\|209951_211079_+\|tRNA-epoxyqueuosine(34)-reductase-QueG	gnl\|CDD\|272993	TIGR00276, iron-sulfur_cluster-binding_protein, epoxyqueuosine reductase. This model was rebuilt to exclude archaeal homologs, now that there is new information that bacterial members are epoxyqueuosine reductase, QueG, involved in queuosine biosynthesis for tRNA maturation. [Protein synthesis, tRNA and rRNA base modification].	4.99817e-180
NZ_CP051643.1\|WP_002445503.1\|186306_187284_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	2.55741e-35
NZ_CP051643.1\|WP_002445512.1\|194194_194650_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	5.77029e-64
NZ_CP051643.1\|WP_002445510.1\|192821_194114_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP051643.1\|WP_037541523.1\|211731_212331_+\|glucosamine-6-phosphate-isomerase	gnl\|CDD\|223440	COG0363, NagB, 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase [Carbohydrate transport and metabolism].	5.89087e-09
NZ_CP051643.1\|WP_170080833.1\|194655_195606_+\|hydroxyacid-dehydrogenase	gnl\|CDD\|240632	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family. Phosphoglycerate Dehydrogenase (PGDH) catalyzes the NAD-dependent conversion of 3-phosphoglycerate into 3-phosphohydroxypyruvate, which is the first step in serine biosynthesis. Over-expression of PGDH has been implicated as supporting proliferation of certain breast cancers, while PGDH deficiency is linked to defects in mammalian central nervous system development. PGDH is a member of the 2-hydroxyacid dehydrogenase family, enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	2.19373e-144
NZ_CP051643.1\|WP_002443579.1\|206418_207477_+\|PTS-transporter-subunit-IIC	gnl\|CDD\|226167	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only].	1.2288e-106
NZ_CP051643.1\|WP_002443570.1\|211081_211552_+\|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL	gnl\|CDD\|349967	cd18094, SpoU-like_TrmL, SAM-dependent tRNA methylase related to TrmL. tRNA (Um34/Cm34) methyltransferase TrmL catalyzes the methyl transfer from S-adenosyl-L-methionine (AdoMet) to the 2'-OH at position 34 in both tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). It is part of the SpoU family of MTases, a subfamily of the SPOUT methyltransferase superfamily. The SPOUT methyltransferase superfamily is a large class of S-adenosyl-L-methionine (AdoMet or SAM)-dependent RNA MTases which are structurally characterized by a deep trefoil knot.	3.1433e-86
NZ_CP051643.1\|WP_002445506.1\|189408_191145_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP051643.1\|WP_002445499.1\|183636_185154_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224057	COG1134, TagH, ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	2.97369e-55
NZ_CP051643.1\|WP_002443581.1\|205752_206073_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.56373e-11
NZ_CP051643.1\|WP_002445504.1\|187436_188480_+\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	1.83399e-139
NZ_CP051643.1\|WP_002445505.1\|188583_189126_+\|DUF402-domain-containing-protein	gnl\|CDD\|184219	PRK13662, PRK13662, hypothetical protein; Provisional.	2.13956e-126

>NZ_CP051643.1|WP_037541849.1|195701_196157_+|peroxide-responsive-transcriptional-repressor-PerR
MSADLESIEHELEESIASLRKAGIRITPQRQAIIRYLISSHSHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDASSRFDFNTHNHYHVICEKCGKIVDFHYPQLDEVEHLAQHVTDFDITHHRMEIYGTCKECKEKDNN
>NZ_CP051643.1|WP_170080833.1|194655_195606_+|hydroxyacid-dehydrogenase
MKIVSLIRLKDLEDELIKKFPNEEFKFYKKAETIPTEDRETLDILIGYDGSIDKAFIEECKNLKWIAWYATGVNNLPLDYINERGIIVTNGRGVQAKQLSEYIIAFILDDYKKMRTSYENQLAHRFDSKLTGHRVNGETLLFLGTGAIAQKTAYLAKAFGMKIVGVSKSGHMKDHFDETYTIEEIDKVIGEANIIVNSLPETNETIHLLQKHHFEQMRDDALFINIGRGTVVDELLLIDVLRNQIIRHAYLDVFENEPLASDNPLYDLNNVTITAHITGNDKHINRDVTAIFEKNLKHFINKNDVIENRVDLNKGY
>NZ_CP051643.1|WP_002445512.1|194194_194650_+|thioredoxin-dependent-thiol-peroxidase
MLNKGEQFPSFSLENQNGEVITNETLKGRKAILYFYPRDNTPTCTTEACDFRDHLSDFNELDVDVYGINGDSKKKHQNFIEKHQLNFDLLVDEDYKLANEVGVYQLKKSFGKESMGIVRTTFVIDENGYIMDVIEKVKVKTQIEELKNILG
>NZ_CP051643.1|WP_002445510.1|192821_194114_-|glutamate-1-semialdehyde-2,1-aminomutase
MNFTESERLQELSNEYILGGVNSPSRSYKAVGGGAPVMMKEGHGAYLYDVDGNKFIDYLQAYGPIITGHAHPHITEAIQDQAAKGVLYGTPTELEIDFSKKLREAIPSLEKIRFVNSGTEAVMTTIRVARAYTKRNKIIKFAGSYHGHSDLVLVAAGSGPSQLGSPDSAGVPQSVAQEVITVPFNDIESYREAIDYWGDEIAAVLVEPIVGNFGMVMPQPGFLEEVNKISHDNGTLVIYDEVITAFRFHYGAAQDLLGVKPDLTAFGKIVGGGLPIGGYGGRQDIMEHVAPLGPAYQAGTMAGNPLSMRAGIALLEVLEQDGVYEKLDQLGRRLEEGLLKLIEKHNITATINRIYGSLTLYFTDEKITHYEQVENSDGEAFAKFFKLMLHQGINLAPSKFEAWFLTTEHTEEDIDQTLEAADYAFSQMKN
>NZ_CP051643.1|WP_002445508.1|191243_192338_-|aromatic-acid-exporter-family-protein
MRLGARIFKTGIAIILAMSIASLLPANIGLKALAGVSAVVAMQPSVYRSIKTVSEQAIGNIIGAILAVTMVTIFSNNFIIMGVTVILLIAILFKFNLAHVATLASVTALVIMGQHTGSFYVAAFFRFALVMIGVLSSSIVNLVFLPPKFETKIYYNSMNISSDIFVWFKLVLNDTSEFHNIKQDCSQLNSRITKLEQIYDYYNEEKPLTKKHIYQQNRKKILFKEVVRTTRQAYEVLNRMSRFQNDLHQLNNQLLLQIKLELDSLVAVHEQIYKSLSKKAKYDVTQLDYEVDNPQKKNLMDAFQQELINNPHQTRYSYGNMMQIIAAIEEYRYHLEHLDRIRLSFFTYHRSDSDIDISDEDFDL
>NZ_CP051643.1|WP_002445506.1|189408_191145_+|ABC-transporter-ATP-binding-protein
MIKRYLKFVQPYRYRIIATIIVGIIKFGIPMLIPLLIKYAIDGVINNHSLSNSEKFSHLGVAIGIALFIFLIVRPPIEYIRQYLAQWTSNKILYDIRKQLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCVTIIIALSIMFFLDVKLTIAAIFIFPFYILTVYFFFGRLRQLTRVRSQALAEVQGFLHERVQGMSVIKSFAIEDNEAKNFDHRNGHFLKRAFQHTRWNAYSFAAINTVTDLGPIIVIGVGAYLVINGSITVGTLAAFVGYLEQLFGPLRRLVSSFTTLTQSFASMDRVFQLMDEDYDIKNGIGAQPIEIKKGQIDLNHVRFKYNENESEVLHDINLTINKGETVAFVGMSGGGKSTLISLIPRFYDVTAGEINIDGNNVKDFLTGSLRNQIGLVQQDNILFSDTVRENILLGRPDATEEEIVEAAKMANAHDFIINLPEGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESEAIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVMENGQIVETGTHQELIAKKGAYEHLYSIQNL
>NZ_CP051643.1|WP_002445505.1|188583_189126_+|DUF402-domain-containing-protein
MVKESIPKEGESIKIQSYKHDGNIHRVWSETTILKGTDHVIIGGNDHTLVTESDGRTWITREPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYHLLDEDEYEQHMNQMNYPHDIDVILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRDY
>NZ_CP051643.1|WP_002445504.1|187436_188480_+|A/G-specific-adenine-glycosylase
MYQNESFKKNIVDWFEKNQRDLPWRETTNPYYIWLSEVMLQQTQVNTVIDYYYRFIHRFPTVASLSEAHEDEVLKYWEGLGYYSRARNFHTAIKEVEAQYDGEVPSEPELFKKLKGVGPYTQAAVMSIAFDQPLATVDGNVFRVWSRLNNDYRDTKLQSTRKAFEQELNPYVQEASGTFNQAMMELGALICTPKSPLCLFCPVQENCEAFHEGTTQELPVKTKNIKKKTVNQKVLLIRNSKGQYLLEKRQEKLLNGMWQFPMREESDADAQLSDYLGLHVQSLEEPIYELRHQFTHMTWNIKVYSVPETHDIPDDELPSNMKWFDLDDREAHTFPVSMDKIYRFIVG
>NZ_CP051643.1|WP_002445503.1|186306_187284_-|metal-dependent-hydrolase
MDTATHIVMGVGLTALATQDPVMAGSFAATATTLVAGSLIPDGDTVLKLKDNATYISHHRGITHSIPFTILWPILITFLIFVIFNHTEPLHVWLWAQLAVFLHVFVDIFNSYGTQALRPITNKWIQLSVISTFDPIIFTLLCIGVLLWIVGVHPYLAFFPIVAILVVYYIVRFMMQATIKKEALKRIDRSHNAVKVFVAPTIKFHVWRVAIQTEQHDYVGTARWKDVEFTDKVKRQSMTPDTLLWKVKGNKDIFTFLNFSSIYRWQTTPLEDGATEIRLMDLRYLNNGRYSFVAIAHLTQDNEIDHSYIGWVFSEDKLQRKLYSQ
>NZ_CP051643.1|WP_002445499.1|183636_185154_+|ABC-transporter-ATP-binding-protein
MGSSIVLRLLKVTHYYRNKSSKKWYLPFGYDAEDINLNNISLHIYQGESLGIIGEPGSSKTLIGRILSGTVKPDKGKVIRTENLFYGDMEHRHVTYQTVQDFVDSAVQLFPYKVNDHKAEQIIQWAHLGDKAKTSISNLSPTEYAQLLLSIARSSKNKIIILSHVLTHLDDVFFKRAIELSDDYIQSNQTLVLIDNDIDKISETANYITWVSHGQIRKEGSLNQVLPVFREHEKDRQSIDSKTQLESFDLDWKKSRTRIPEMTYNFKRIERYNHAKPPVFLVRFWTLFASFLIGLALMGVLLFNNLGKVHISENNTQAAIQNQSKDPYEDKLAYGLALDGSTTLKGTKNTELPKYGLATITGENSKKYRIEMNQKTYTVGKSDLFYFNPAGLYESHSFKKLSPYIKTNYSTYIEYFNSHLHQKHDKVTKTLVPEKDSRYVVPITQQPIKMIFGDEDTLSGFVVPMEHKTELKKKYNIKKDVWITKSGNGYFIADMKDNKWIYIEL
>NZ_CP051643.1|WP_002443584.1|204803_205541_-|hypothetical-protein
MLLYLFFTLLIIFAVSTVVLIILLIISKVNKKSIKPYVISTSITLVLTIIFLVLTIFFHHINERNKKEMYPPKTVELKDGSYEVGKDLEPGHYTISSKNNKGYIEIKTVEDWSFEEKFGKDYGTLDNATTPTITTYLMEGDKINLDKAELTTFKPKHQTFTNPISTGVWIVGKDVKPGKYKIYTTFSHDIGGNFKIFNRDGSLDKEYILVGKDSDRPYDTEGAVTLKSGQILILNHMYSVSLEKK
>NZ_CP051643.1|WP_002443581.1|205752_206073_-|helix-turn-helix-transcriptional-regulator
MSAKSARTIFSENLQRLMRNKNVDQKELAETIGVTQPTISNWIKEIKYPRIKRIQLLADYFNVPKSELTEEHSIVTKNAIAAYITPDVTEEEMKEIINFIEYIKSK
>NZ_CP051643.1|WP_002443579.1|206418_207477_+|PTS-transporter-subunit-IIC
MSNSHVNGKSFFNNILNAVGAGVVIALLPNALLGELLKFFKEGNHLLETVYQLVIVIQSFMAFIIGVLAAHQFKFKGAGAAIIGTSAMLGSGVVHFSNKGIELKGIGDIINVIVVVALACFIYMFLEGKLGSFEMIILPVLVPVISGVIGLLTLPYVQVITQSIGRVVNGFTELNPLLMSILICVTFSLLMVTPISLVAIATAISLTGLGSGAANMGIVAACVTFLFGSLRVNSIGVNLVLLIGAAKMMIPVYLKHLIIAIPLTVNGIICGIVAYVLNIKGTPLSAGFGYTGLVGPINALNRMSGDTSFNIIMLIIGYFVVPFTGAFIVHHLCKKFIHSYSDEIYQFEIPKE
>NZ_CP051643.1|WP_049402038.1|207619_209077_+|ABC-transporter-substrate-binding-protein/permease
MNKTFKIIIDIAILISSAMIYINPIASAKEDSNWNKIKQRGEIRVGLSADYAPLEFEKTVHGKTEYAGVDIELAKKIAKDNHLKLKIVNMQFDSLLGALKTGKIDIIISGMTTTPERKKEVDFTEPYMMTNNTMLVKKSEKNQYKSLKDFDGKKIAAQKGTEQEKIAQNEINNGQISSLSRLPDAILALKSGKVVGTVIEKPVAEAYLKQNPELDFADVKFNEEKKPTCIALPKDSPELLKHLNQTIDEVKSKNLIDSYMNKAAEDMQDDGNFFTKYGSFFIKGIKDTILISSIGVILGSILGALIALMKLSKFKPLSWLASIYIEFLRGTPMLVQVFIVFFGTTAALGLDVSALICGTIALVINSSAYIAEIIRAGINAVDKGQTEAARSLGLNYSQTMKFVVMPQAIKNILPALGNEFVTLIKESSIVSTIGVGEIMFNAQVVQGISFDPFTPLLIAAVLYFILTFALSRIMSLVEGRMKASD
>NZ_CP051643.1|WP_002443573.1|209069_209792_+|amino-acid-ABC-transporter-ATP-binding-protein
MIKIKNLNKTFGHNEVLKDINLEVKQGEVVAIIGPSGSGKSTLLRCMNLLETPTKGQVIFEGNDLTEKNVHLDELRQKMGMVFQSFNLFPHKKVIENIMLAPKLLHKDNQGTIKEIALNLLDKVGLKDKAEAYPNQLSGGQKQRVAIARALAMKPDVLLFDEPTSALDPEVVGDVLKVMRDLAKDGMTMVIVTHEMNFAKEVSNKVVFMADGVVVESGSPVDIFEHPQHERTQNFLSRVL
>NZ_CP051643.1|WP_002443571.1|209951_211079_+|tRNA-epoxyqueuosine(34)-reductase-QueG
MDYKQLKREIIDYAHSIGIDSIGFTTADPFDELKQKLESYHSRGYASGFEESDIALRTEPKLSLPSARSIIAIAVGYPNKLKGAPKSVRGDRRGMFARASWGQDYHTIMRKRLDKLSEFLRERVPNVEIQSMVDTGVLSDRAVAERAGLGFVGRNGFVISPELGTWTYLGEMLVSIPFEPDDPILDSCGDCTICVDRCPTGALVGNGQLNSQKCISFLTQTKGYLEDEYRYKIGNRLYGCDTCQQVCPKNRGINTQHDDIVLEPEILKPRLVPLLQMSNKEFKNTYGHLAGAWRGKKPIQRNAIIALAHFKEENAIPELKEVALNDPRPMIRGTAYWAIGQIQGEDARHFINENFEKEIEEVQVEMKKGLEMRRD
>NZ_CP051643.1|WP_002443570.1|211081_211552_+|tRNA-(uridine(34)/cytosine(34)/5--carboxymethylaminomethyluridine(34)-2'-O)--methyltransferase-TrmL
MTNHIVLFQPEIPANTGNIARTCAGTLTHLHLIKPLGFSTDDKMLKRAGLDYWEHVNITYHESIEAFFESTEGNYYLLTKFGKQTYSDFNFSNTEEEHYFIFGRETTGLPNWVKEKYADTALRIPMSDKIRSLNLSNTAALLIYEALRQQQFPNLS
>NZ_CP051643.1|WP_037541523.1|211731_212331_+|glucosamine-6-phosphate-isomerase
MAMNFKVFDNNERVAEYAADIIRKQFNNNPTTIAGFHLDKDQAPVLDELKKNVDTHAVDFSQINILDYDDNRSYYEALGVPESQVYSISYEKDAIEFISDKMKTKENKGKLILQVLSIDESGKLDVSVRQGLMEAREIFLVVTGSNKRDVIEKLYRENGKSSYEPADLKAHRMVNVILDKEAAAGLPEDVKEYFTARFV
>NZ_CP051643.1|WP_002443566.1|212355_212535_+|hypothetical-protein
MAKEQESKLNYHEEENAMVTDLDDLKELGKEMEQISEENDEDKLNQSHDEDVRSDLQDK
>NZ_CP051643.1|WP_002443564.1|212770_213169_+|hypothetical-protein
MLGKYWIHLMIATVIISLISVKGFPLALGALYLPLLFKIVQLQLNLSKGLVDDVSAQTFIKSNQSGVIISVICCLAITGILIYTLNDFYSRLTGILGFLVQISPITIVISAILFILLAIAIVQATKTKYKHS

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Crispr_ID: NZ_CP051643_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_2

775698-775791

Orphan

Consensus_repeat	Method
GCATAAGAGCCACTAACCGATGAATCGGTAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_2

>merge|NZ_CP051643|2|775698-775791|CRISPRCasFinder
GCATAAGAGCCACTAACCGATGAATCGGTAAGCTTTTGGTAATACTTGAATCTACGCTTCATGCATAAGAGCCACTAACCGATGAATCGGTAAG

>NZ_CP051643|2|2|775698-775791|CRISPRCasFinder
GCATAAGAGCCACTAACCGATGAATCGGTAAG	CTTTTGGTAATACTTGAATCTACGCTTCAT
GCATAAGAGCCACTAACCGATGAATCGGTAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_002442594.1\|782900_784187_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP051643.1\|WP_002442599.1\|780773_781166_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224343
NZ_CP051643.1\|WP_002442616.1\|770781_771402_-\|poly-gamma-glutamate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|368663
NZ_CP051643.1\|WP_002442596.1\|782196_782901_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235506
NZ_CP051643.1\|WP_044466279.1\|774321_775116_-\|TIGR00282-family-metallophosphoesterase	unknown	unknown	gnl\|CDD\|379099
NZ_CP051643.1\|WP_037541418.1\|764949_767568_-\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_CP051643.1\|WP_002442610.1\|775278_775494_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002442615.1\|771559_772426_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	unknown	unknown	gnl\|CDD\|237006
NZ_CP051643.1\|WP_002442608.1\|775804_777364_-\|ribonuclease-Y	unknown	unknown	gnl\|CDD\|237177
NZ_CP051643.1\|WP_002442602.1\|780160_780742_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|273139
NZ_CP051643.1\|WP_002442620.1\|768655_770200_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|184624
NZ_CP051643.1\|WP_037541417.1\|777606_778659_-\|recombinase-RecA	unknown	unknown	gnl\|CDD\|236476
NZ_CP051643.1\|WP_002442591.1\|785498_786209_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP051643.1\|WP_002442623.1\|767770_768265_-\|energy-coupling-factor-transporter-S-component-ThiW	unknown	unknown	gnl\|CDD\|131412
NZ_CP051643.1\|WP_002442598.1\|781184_782012_-\|YmfK-family-protein	unknown	unknown	gnl\|CDD\|314698
NZ_CP051643.1\|WP_002442605.1\|778823_779975_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	unknown	unknown	gnl\|CDD\|234789
NZ_CP051643.1\|WP_002442618.1\|770401_770698_-\|thiamine-binding-protein	unknown	unknown	gnl\|CDD\|223090
NZ_CP051643.1\|WP_037541551.1\|784186_785452_-\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685
NZ_CP051643.1\|WP_002442613.1\|772426_774187_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	unknown	unknown	gnl\|CDD\|274738
NZ_CP051643.1\|WP_002442622.1\|768288_768654_-\|YlbF-family-regulator	unknown	unknown	gnl\|CDD\|226923

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_002442594.1\|782900_784187_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	2.09223e-78
NZ_CP051643.1\|WP_002442599.1\|780773_781166_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	2.48084e-32
NZ_CP051643.1\|WP_002442616.1\|770781_771402_-\|poly-gamma-glutamate-hydrolase-family-protein	gnl\|CDD\|368663	pfam05908, Gamma_PGA_hydro, Poly-gamma-glutamate hydrolase. This family consists of a number of bacterial and phage proteins that function as gamma-PGA hydrolase enzymes. Structurally the protein in this family adopted an open alpha/beta mixed core structure with a seven-stranded parallel/anti-parallel beta-sheet. This structure shows similarity to mammalian carboxypeptidase A and related enzymes.	2.4766e-73
NZ_CP051643.1\|WP_002442596.1\|782196_782901_-\|SDR-family-oxidoreductase	gnl\|CDD\|235506	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	3.09191e-58
NZ_CP051643.1\|WP_044466279.1\|774321_775116_-\|TIGR00282-family-metallophosphoesterase	gnl\|CDD\|379099	pfam13277, YmdB, YmdB-like protein. This family of putative phosphoesterases contains the B. subtilis protein YmdB.	2.6995e-152
NZ_CP051643.1\|WP_002442623.1\|767770_768265_-\|energy-coupling-factor-transporter-S-component-ThiW	gnl\|CDD\|131412	TIGR02359, conserved_hypothetical_protein, energy coupling factor transporter S component ThiW. Levels of thiamine pyrophosphate (TPP) or thiamine regulate transcription or translation of a number of thiamine biosynthesis, salvage, or transport genes in a wide range of prokaryotes. The mechanism involves direct binding, with no protein involved,to a structural element called THI found in the untranslated upstream region of thiamine metabolism gene operons. This element is called a riboswitch and is seen also for other metabolites such as FMN and glycine. This protein family consists of proteins identified in operons controlled by the THI riboswitch and designated ThiW. The hydrophobic nature of this protein and reconstructed metabolic background suggests that this protein acts in transport of a thiazole precursor of thiamine. [Transport and binding proteins, Other, Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.64209e-55
NZ_CP051643.1\|WP_002442615.1\|771559_772426_-\|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta	gnl\|CDD\|237006	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed.	1.44852e-176
NZ_CP051643.1\|WP_002442608.1\|775804_777364_-\|ribonuclease-Y	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0
NZ_CP051643.1\|WP_002442602.1\|780160_780742_-\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	5.40773e-49
NZ_CP051643.1\|WP_002442620.1\|768655_770200_-\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|184624	PRK14327, PRK14327, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP051643.1\|WP_037541417.1\|777606_778659_-\|recombinase-RecA	gnl\|CDD\|236476	PRK09354, recA, recombinase A; Provisional.	0
NZ_CP051643.1\|WP_002442591.1\|785498_786209_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.62369e-48
NZ_CP051643.1\|WP_037541418.1\|764949_767568_-\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NZ_CP051643.1\|WP_002442598.1\|781184_782012_-\|YmfK-family-protein	gnl\|CDD\|314698	pfam11868, DUF3388, Protein of unknown function (DUF3388). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 261 to 275 amino acids in length. This protein is found associated with pfam01842.	1.75557e-118
NZ_CP051643.1\|WP_002442605.1\|778823_779975_-\|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein	gnl\|CDD\|234789	PRK00549, PRK00549, competence damage-inducible protein A; Provisional.	7.38755e-133
NZ_CP051643.1\|WP_002442618.1\|770401_770698_-\|thiamine-binding-protein	gnl\|CDD\|223090	COG0011, COG0011, Uncharacterized conserved protein [Function unknown].	1.35466e-26
NZ_CP051643.1\|WP_037541551.1\|784186_785452_-\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	1.56463e-68
NZ_CP051643.1\|WP_002442613.1\|772426_774187_-\|2-oxoacid:acceptor-oxidoreductase-subunit-alpha	gnl\|CDD\|274738	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit. This family of proteins contains a C-terminal thiamine diphosphate (TPP) binding domain typical of flavodoxin/ferredoxin oxidoreductases (pfam01855) as well as an N-terminal domain similar to the gamma subunit of the same group of oxidoreductases (pfam01558). The genes represented by this model are always found in association with a neighboring gene for a beta subunit (TIGR02177) which also occurs in a 4-subunit (alpha/beta/gamma/ferredoxin) version of the system. This alpha/gamma plus beta structure was used to define the set of sequences to include in this model. This pair of genes is not consistantly observed in proximity to any electron acceptor genes, but is found next to putative ferredoxins or ferredoxin-domain proteins in Azoarcus sp. EbN1, Bradyrhizobium japonicum USDA 110, Frankia sp. CcI3, Rhodoferax ferrireducens DSM 15236, Rhodopseudomonas palustris BisB5, Os, Sphingomonas wittichii RW1 and Streptomyces clavuligerus. Other potential acceptors are also sporadically observed in close proximity including ferritin-like proteins, reberythrin, peroxiredoxin and a variety of other flavin and iron-sulfur cluster-containing proteins. The phylogenetic distribution of this family encompasses archaea, a number of deeply-branching bacterial clades and only a small number of firmicutes and proteobacteria. The enzyme from Sulfolobus has been characterized with respect to its substrate specificity, which is described as wide, encompassing various 2-oxoacids such as 2-oxoglutarate, 2-oxobutyrate and pyruvate. The enzyme from Hydrogenobacter thermophilus has been shown to have a high specificity towards 2-oxoglutarate and is one of the key enzymes in the reverse TCA cycle in this organism. Furthermore, considering its binding of coenzyme A, it can be reasonably inferred that the product of the reaction is succinyl-CoA. The genes for this enzyme in Prevotella intermedia 17, Persephonella marina EX-H1 and Picrophilus torridus DSM 9790 are in close proximity to a variety of TCA cycle genes. Persephonella marina and P. torridus are believed to encode complete TCA cycles, and none of these contains the lipoate-based 2-oxoglutarate dehydrogenase (E1/E2/E3) system. That system is presumed to be replaced by this one. In fact, the lipoate system is absent in most organisms possessing a member of this family, providing additional circumstantial evidence that many of these enzymes are capable of acting as 2-oxoglutarate dehydrogenases and.	0
NZ_CP051643.1\|WP_002442622.1\|768288_768654_-\|YlbF-family-regulator	gnl\|CDD\|226923	COG4550, COG4550, Predicted membrane protein [Function unknown].	2.18006e-29

>NZ_CP051643.1|WP_002442610.1|775278_775494_+|hypothetical-protein
MSINIDPEKFAELVVSSNPAKSDEPEDIAKESLTLYINAYRLAERYSNIATNCYDTAEIIREINDADLQLK
>NZ_CP051643.1|WP_044466279.1|774321_775116_-|TIGR00282-family-metallophosphoesterase
MRILFIGDIVGKIGRNAISTYLPKIKQSYHPTVSIVNAENAAHGKGLTEKIYKQLLREGVDFMTMGNHTYGQREIYEFIDNANRMVRPANFPEEAPGVGMRFIQINEIKLAIINLQGRTFMQDIDDPFKKADQLIEEARQVTPYIFVDFHAETTSEKNAMGWYLDGRVSAVVGTHTHIQTSDNRVLPKGTGYITDVGMTGYYDGILGINRDEVIHRFITSLPQRHVVPDEGRSVLSGVIIDIDKEGKTTQIERILINDDHPFQG
>NZ_CP051643.1|WP_002442613.1|772426_774187_-|2-oxoacid:acceptor-oxidoreductase-subunit-alpha
MKSQISWKVGGQQGEGIESTGEIFATAMNRKGYFLYGYRHFSSRIKGGHTNNKIRVSTSPVHAISDDLDILVAFDQETIELNHHEMRNDSIIIADSKAKPEKPEDCKAQLIDLPFTSTAKELGTALMKNMVAIGATSALMNLDTSTFEELITNMFSKKGEKVVEMNIQALNEGYRLMQAQLNAIEGDFELEENNENPHLYMVGNDAIGLGAISAGSKFMAAYPITPASEIMEYMIANLPKVGGTVIQTEDEIAAATMAIGSNYAGVRGFTASSGPGLSLMMESIGLSGMTETPFVIVNTQRGGPSTGLPTKQEQSDLMQMIYGTHGDIPKIVVAPTDAEDAFYLTVEAFNLAEEYQCPVIILSDLQLSLGKQTVKALDYNKIEIKRGELLQSDIEREEDDKSYFRRYALTGSGISPRPIPGVKGGIHHITGVEHNEEGKPSEAASNRQAQMEKRMRKTENLVIEKPVESNERHEHADILYIGFISSKGAIMEGSERLEEQGIKVNTLQIRQLHPFPKDTIQQSIDKASKVVVAEHNYQGQLSSILKMNIQLQDKLVNQTKYDGTPFLPHEIETKGLEIVKEIKELV
>NZ_CP051643.1|WP_002442615.1|771559_772426_-|2-oxoacid:ferredoxin-oxidoreductase-subunit-beta
MATFKDFRNNVKPNWCPGCGDFSVQAAIQKAAANVGLEPEEVAIITGIGCSGRLSGYIKSYGVHAIHGRALPLAQGVKMANKDLTVIASGGDGDGYAIGMGHTIHALRRNMNMTYIVMDNQIYGLTKGQTSPSSAVGFVTKTTPKGNIEKNVAPLELALSSGATFVAQGFSSDIKALTKLIEDAINHDGFSFVNVFSPCVTYNKVNTYDWFKEHLTNIDDIENYDTSDKQLAMKTVLEHESLVKGIVYQDTETPSYESQIDELEDEALAKKDIHISEETFNDLTAQFV
>NZ_CP051643.1|WP_002442616.1|770781_771402_-|poly-gamma-glutamate-hydrolase-family-protein
MDKFKSMKILEKKTIENEDWEIEIEDKDSDVSILAIHGGGIEPGTTELAQVIAEKGGYNYFSFKGIRSKGNNELHVTSTHYDNQQALDLVKKSERAITVHGCKGEESVVYIGGDDYQLIDILSETLQDIGIKVEGAPHTMAGTQNRNITNQTKNDAGVQLELTSELRKSLFVNHKSSRKSRENRDNWGDLMYDFADATSKAIQQVQ
>NZ_CP051643.1|WP_002442618.1|770401_770698_-|thiamine-binding-protein
MNDTLMSVQIVPRTPNNQDVIPYVDEAIKIIDESGLHYRVGPLETTVQGDMSECLILIQKLNERMVELECPSIISQVKFYHVPEGIEIETLTGKYDQE
>NZ_CP051643.1|WP_002442620.1|768655_770200_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MNEEQRKAGTINILAERDRKAEKDYSKYFEQVYQPPSLKEAKKRGKQEVQYNRDFHIDEKYKGMGNGRTFLIKTYGCQMNAHDTEVMAGILKALGYSATSDINQADVILINTCAIRENAENKVFSEIGNLKHLKKERPECLIGVCGCMSQEESVVNKILKSYQNVDMIFGTHNIHHLPEILEEAYLSKAMVVEVWSKEGDVIENLPKVREGSIKAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDIINEVRELAREGYQEITLLGQNVNSYGKDIEGLDYGLGDLLEDISKIDIPRVRFTTSHPWDFTDRMIEVIANGGNIVPHIHLPVQSGNNAVLKIMGRKYTRESYLDLVSRIKNAIPDIALTTDIIVGYPNETEEQFEETLSLYDEVEFEHAYTYLYSQRDGTPAAKMKDNVPTEVKKERLQRLNKKVGEYSQKAMSQYEGEIVTVLCEGSSKKDDTVLAGYTAKNKLVNFKAPKEMIGKLVDVKIDEAKQYSLNGTFVGEHQSEMVVQ
>NZ_CP051643.1|WP_002442622.1|768288_768654_-|YlbF-family-regulator
MYSKEDILKHADTLANRINNLEIVKDYQTIEKQIHNNKTIENKMKNLKKQQKQSVNFQNYGKDNAFQQSENQIHHIEDEINQLPIVEEFRSAQYDANDLLQMMIKTMEDRLNEHNEREHKE
>NZ_CP051643.1|WP_002442623.1|767770_768265_-|energy-coupling-factor-transporter-S-component-ThiW
MKVRKLTITAILIAINIVLSSLIVIPLGPIKAAPVQHFINVLCAVFVGPWYGLAQAFISSIFRVSFGTGSVFAFPGSMIGVFLSSLFYMYRKHIFMAAVGEVLGTGVIGSLMCIPLAWFMNFDNFLVRPLMIAFIVSSVIGSLISYILLIVLKRRGLLDKFNKK
>NZ_CP051643.1|WP_037541418.1|764949_767568_-|DNA-mismatch-repair-protein-MutS
MANVTPMMQQYLKIKSEYDDCLLFFRLGDFYEMFFEDAKEASRVLEITLTKRDAKKENPIPMCGVPYHSADSYIETLINNGYKVAICEQMEDPKQTKGMVKREVVRIVTPGTVMEQGGVDEKQNNYILSFVKDEVYALSYCDVSTGELKATHFQDEATLLNEITTINPNEIVVNEELPEELKRQISMTTETVTVRENISEMQYNTNKLTHNQMFKSTQLLLDYIHHTQKRDLSHIEEVAEYAAIDFMKMDFYAKRNLELTESIRLKSKKGTLLWLMDETKTPMGARRLKQWVDRPLINKNQINERLNIVEEFINRFIERDTLRNYLNQVYDIERLVGRVSYGNVNARDLIQLKHSISEIPNIKALLNELDAQTTSQFSELEPLDDLLELLEESLVEEPPISVKDGGLFKTGFNEQLDEYLEASKNGKTWLAELQAKERARTGIKSLKISFNKVFGYFIEITRANLQGFEPSEFGYNRKQTLSNAERFITDELKEKEDIILGAEDKAIELEYQLFVKLREHIKTYTERLQKQAKIISELDCLQSFAEIAQKYNYVRPSFSDDKTLKLENSRHPVVERVMDHNDYVPNDCNLDNDTFIYLITGPNMSGKSTYMRQVAIISIMAQMGAYVPCDSAVLPVFDQIFTRIGAADDLVSGKSTFMVEMLEAQKALTYATENSLIIFDEIGRGTSTYDGLALAQAMIEYVAQTSHAKTLFSTHYHELTSLDQMLPCLKNVHVAANEYKGELIFLHKVKDGAVDDSYGIQVAKLADLPEEVINRAQIILDEFEQKPSGQIMPNELSQDNHEGRLSTNESNNSINAEKTINSKNDFEQASFDLFENNDQQSEIELEIKNLNLSNMTPIEALVKLSDLQKQLR
>NZ_CP051643.1|WP_002442608.1|775804_777364_-|ribonuclease-Y
MNLLSLLLILLGIILGVVVGYVVARNLLHQKQVQSRQTAEDIVNHANKEADNIKKEKLLEAKEENQILREQAESELRERRGELQRQETRLLQKEENLDRKSDLLDKKDEILEQKESKLEERQQQVDAKESSVQTLIMKHEQELERISGLTQEEAVNEQLHRVEEELSQDIAILVKEKEKEAKEKVDKTAKELLATTVQRLAADHTTESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVEKARKEVDDIIRDAGEQATFEINVHNMHPDLVKILGRLNYRTSYGQNVLKHSIEVAHLSGMLAAELDEDITLAKRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYGENETVINAIHSHHGDVEPTSIISILVAAADALSAARPGARKETLENYIRRLERLEALSESYDGVEKAFAIQAGREIRVVVSPEEIDDLKSYRLARDIKNQIEEELQYPGHIKVTVVRETRAVEYAK
>NZ_CP051643.1|WP_037541417.1|777606_778659_-|recombinase-RecA
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNRTKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQGKENVKNYLKENPQIKEEIDRKLREKLGIFDGDVEETESEEDTPKTLFDEE
>NZ_CP051643.1|WP_002442605.1|778823_779975_-|CinA-family-nicotinamide-mononucleotide-deamidase-related-protein
MKISIIAVGSELLLGQIANTNGQYLSKLFNSIGKSVVEHTVIGDNPKRLEYVIKQGLERFDTLVLTGGLGPTKDDLTKHTVAKVLGRELVTDESSLSYIESYFREQGQEMTPNNKQQALVIEGSKVLPNKTGMAPGMLVEKEEKKVVLLPGPPKEMKPMAKNELLPYLLDDDRVIFSELLRFAGIGESKVETILMDLIDNQSNPTIAPLAGTHEVYIRLTANADTQTECEKLIQPIKKEILNRIGEYYFGSDDITIEESVMSKVKRTFAIYDGVTNGALYTRLKNVDTDNLLKGILPHSSVFVENDENIHAQLLSAAQYVRDLYQTELGIVLLNKDGEVYLAIYDGENLNIDTFKMAQSRNLLRNRSQNYAMIRLLKWFEQQE
>NZ_CP051643.1|WP_002442602.1|780160_780742_-|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNIPNQITVFRVILIPVFILFALVDFGFGQVSFLGGYHIRIEILISAIIFIIASLSDFADGYLARKWQLVTNMGKFLDPLADKLLVASALIVMVQLGFTNSVVAIIIIAREFAVTGLRLLQIEQGFVSAAGQLGKIKTAVTMVAIIWILLGDPLVHFIHFPLGVTLLYIGVFFTILSGIEYFYKGRDVFKQSK
>NZ_CP051643.1|WP_002442599.1|780773_781166_-|helix-turn-helix-domain-containing-protein
MKTVGEALKGRRERLGMTLNELEQRTQLKRQTLIHIENNDFDLLAKKDYTEGFIRKYANVVNIEPNQLIEAHRDEIPSNQHQMDQLMTTFSNGQVPSYRSKSKETIQLVMLIGMIVIVSLIIWILAVLIL
>NZ_CP051643.1|WP_002442598.1|781184_782012_-|YmfK-family-protein
MTVAERKEWYLEYEITINRAGLLGDISSLLGMLGISIVTINGVDQGKRGLLIKTDKLEKVERFEQIVKEINEIDITKLRIPELRDRLAVRHGRYIEQDADDKKTFKFEREDLGLLVDFLAELFKEEGHKLIGIRGMPRVGKTESIVAGSVCAHKRWLFISSTLIKQTVRSSLIKGEYESNHVYIIDGAVTARESNPKHQDLVREVMTLPSIKVVEHPDLFVEACNYSMDDFDYIIELRENENQEIHYDEMKKQTVQSKNSLEFGDPFGGGFGFFE
>NZ_CP051643.1|WP_002442596.1|782196_782901_-|SDR-family-oxidoreductase
MKALVIGGSGSIGTAIVDRLLDEGYEVIIHYNTADLTSLKEKYKNNNVEFIQCDLAQDITLSEYFGHLNDIDCLIYTSGTALYGMLQDMSDEDIDYSYALHVRQFIRLSRYFVDTLRKSNNGRIIVISSIWGETGASMESIYSAMKSAQIGFVKALSQELALTSVTVNAIAPGFVSGNMSNAWSKEEMESIVVELPQNRMIEPYEVAHVCAYLCHPMSRSITGTVQKVNGGWYL
>NZ_CP051643.1|WP_002442594.1|782900_784187_-|insulinase-family-protein
MKVHNYELIDEKVFEHELDNGLKLFIIPKPGFQKTFVTYTTQFGSLDNHFKPLGSNEFVKVPDGVAHFLEHKLFEKEEEDLFTAFAEENAQANAFTSFDRTSYLFSATNHLESNIKRLLTMVETPYFTEETVNKEKGIIAEEIKMYQEQPGYKLMFNTLRAMYSKHPIRVDIAGSVDSIYDITKDDLYLCYETFYHPSNMVLFVVGDVDPQSIVDLVDNHEKQRNKTNQPQIERAQIKEPEEVNTHTVTEKMKLQSPRLMLGFKNQPLNESSEKYVQRDLEMTFFYELIFGEETDFYQDLLNKDLIDETFGYQFVLEPSYSFSIITSATQHPDELKELLINELKKYRGHLADQEAFDLLKKQFIGEFISSLNSPEYIANQYAKLYFEGVSVFDMLEIVENITLESVNETSKLFLDFDHLVDSRLELKE
>NZ_CP051643.1|WP_037541551.1|784186_785452_-|insulinase-family-protein
MNHDHSNIHINVLPTEKFKTTMVTFKFMAPLDYETITSRSILSKVLVRATQKWPNDKALNRHLSNLYGAYINSFVTKFKDKHVITISLEIVNERYLKDSTPLFEKGLEMLKELIWNPLIEDEQFNEKYVAQEKSLLTKKIEAMTDNKAQYSFLKLMNYMFKDEPYKYIATGQLEQIPQVTAQNLYDTYKSMIHNDECAIYVVGNVNEQETRNLIQNNFEIKPFELEKGSPLTQINHIGSPKVIIEEDEVDQAKLNLGYRFPTYYGKQNYYAFVVFNMMFGGDPSSVLFNEVREKQSLAYSIHSQIDGKNGFLFVLSGVSADKYERAKDTILEEFDKLKNGEFDETKLELAKKIIISHRHESTDRPKSMIELLHNQLLLDEYQSDEDFIKAINQVTKEDVIELANEAVLDTIYVLTKGGQSE
>NZ_CP051643.1|WP_002442591.1|785498_786209_-|GntR-family-transcriptional-regulator
MSEMNAIYRVKQYILNMIKNGELENGGKLPSNLSIARALNVKTDDVYDGIGELITEQIVTDNFEEGTSVKAQPPFFYPLDKLISISTMIEEAGYKAGIEYLNFDEQPATILDAEHLGIETKQPVTIIERLRTADHKPVVYCLDKIAKQYLTCLDYQKSNGSMLRAIKDATGHEVTHAEMDLEAISYEPHISEVLNASPHEGLMLLKVVHYDENGQPILYSLNYLKSSLVKFKVNKN

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Crispr_ID: NZ_CP051643_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_3

842456-842718

Unclear

Consensus_repeat	Method
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	CRISPRCasFinder
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	CRT

4 spacers

cas3

The CRISPR arrays of NZ_CP051643_3

>merge|NZ_CP051643|3|842456-842718|CRISPRCasFinder,CRT
CTTAGCACTTTAGTGCTTAGTGTTTCTTATGCATGAGCTTTAGCTCAGGCGTTCCTTTTTACTGCACTTTAGTGCTTAGTGTTTCTTATGCAGTTGTGCCAACAACTGTATACCATACTGCACTTTAGTGCTTAGTGTTTCTTATGCATGAGCTTTAGCTCAGGCGTTCCTTTTTACTGCACTTTAGTGCTTAGTGTTTCTTATGCAGTTGTGCCAACAACTGTATACCATACTGCACTTTAGTGCTTAGTGTTTCTTATGCA

>NZ_CP051643|3|3|842456-842718|CRISPRCasFinder
CTTAGCACTTTAGTGCTTAGTGTTTCTTATGCA	TGAGCTTTAGCTCAGGCGTTCCTTTT
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	GTTGTGCCAACAACTGTATACCA
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	TGAGCTTTAGCTCAGGCGTTCCTTTT
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	GTTGTGCCAACAACTGTATACCA
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA

>NZ_CP051643|3|1|842456-842718|CRT
CTTAGCACTTTAGTGCTTAGTGTTTCTTATGCA	TGAGCTTTAGCTCAGGCGTTCCTTTT
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	GTTGTGCCAACAACTGTATACCA
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	TGAGCTTTAGCTCAGGCGTTCCTTTT
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA	GTTGTGCCAACAACTGTATACCA
TACTGCACTTTAGTGCTTAGTGTTTCTTATGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_002442499.1\|848712_849567_-\|thermonuclease-family-protein	unknown	unknown	gnl\|CDD\|366169
NZ_CP051643.1\|WP_044466285.1\|845529_846099_-\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_CP051643.1\|WP_002442522.1\|834626_835994_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP051643.1\|WP_002436293.1\|832316_832667_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP051643.1\|WP_002442517.1\|836344_837601_-\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_CP051643.1\|WP_002439483.1\|834135_834411_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP051643.1\|WP_037541388.1\|852821_853196_-\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_CP051643.1\|WP_002442500.1\|846441_848490_-\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP051643.1\|WP_044466284.1\|837597_841167_-\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_CP051643.1\|WP_037541397.1\|842904_843639_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP051643.1\|WP_001830184.1\|842131_842365_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP051643.1\|WP_037541391.1\|849844_850912_-\|Glu/Leu/Phe/Val-dehydrogenase	unknown	unknown	gnl\|CDD\|223411
NZ_CP051643.1\|WP_002442519.1\|836025_836358_-\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP051643.1\|WP_002442526.1\|832771_833509_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP051643.1\|WP_002442524.1\|833508_834012_-\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_CP051643.1\|WP_002435210.1\|853574_853763_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP051643.1\|WP_037541395.1\|844550_845537_-\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_CP051643.1\|WP_037541396.1\|843631_844558_-\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP051643.1\|WP_002442511.1\|841265_842012_-\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_CP051643.1\|WP_002442495.1\|851148_852807_-\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_002442499.1\|848712_849567_-\|thermonuclease-family-protein	gnl\|CDD\|366169	pfam00565, SNase, Staphylococcal nuclease homolog. Present in all three domains of cellular life. Four copies in the transcriptional coactivator p100: these, however, appear to lack the active site residues of Staphylococcal nuclease. Positions 14 (Asp-21), 34 (Arg-35), 39 (Asp-40), 42 (Glu-43) and 110 (Arg-87) [SNase numbering in parentheses] are thought to be involved in substrate-binding and catalysis.	7.18235e-38
NZ_CP051643.1\|WP_044466285.1\|845529_846099_-\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	9.49114e-98
NZ_CP051643.1\|WP_002442522.1\|834626_835994_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP051643.1\|WP_002436293.1\|832316_832667_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_CP051643.1\|WP_002442517.1\|836344_837601_-\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_CP051643.1\|WP_002439483.1\|834135_834411_-\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_CP051643.1\|WP_037541388.1\|852821_853196_-\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	3.34809e-36
NZ_CP051643.1\|WP_002442500.1\|846441_848490_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP051643.1\|WP_044466284.1\|837597_841167_-\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_CP051643.1\|WP_037541397.1\|842904_843639_-\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	4.95689e-138
NZ_CP051643.1\|WP_001830184.1\|842131_842365_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_CP051643.1\|WP_037541391.1\|849844_850912_-\|Glu/Leu/Phe/Val-dehydrogenase	gnl\|CDD\|223411	COG0334, GdhA, Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism].	2.72418e-99
NZ_CP051643.1\|WP_002442519.1\|836025_836358_-\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	1.81469e-44
NZ_CP051643.1\|WP_002442526.1\|832771_833509_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	3.10326e-167
NZ_CP051643.1\|WP_002442524.1\|833508_834012_-\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.27328e-69
NZ_CP051643.1\|WP_002435210.1\|853574_853763_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.17838e-19
NZ_CP051643.1\|WP_037541395.1\|844550_845537_-\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	2.41103e-173
NZ_CP051643.1\|WP_037541396.1\|843631_844558_-\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	8.80996e-131
NZ_CP051643.1\|WP_002442511.1\|841265_842012_-\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.07231e-116
NZ_CP051643.1\|WP_002442495.1\|851148_852807_-\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0

>NZ_CP051643.1|WP_001830184.1|842131_842365_-|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_CP051643.1|WP_002442511.1|841265_842012_-|ribonuclease-III
MANQKKIDMVKDFQQTFTNKMNEWGFSFNNIDLYQQAFSHSSFINDFNMNRLDHNERLEFLGDAVLELTVSRYLFDKHPHLPEGNLTKMRATIVCEPSLVIFANKIDLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLETVWAFAEKVIFPYVEDNELVGVVDFKTQFQEFVHRQNKGDVTYRLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKSMKKNEKLRHH
>NZ_CP051643.1|WP_044466284.1|837597_841167_-|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNYAEVKLKLDNQSKKLQIDSDELVVTRRLYRSGESEYYLNNDRARLKDIIEIFLDSGLGKEAFSIISQGRVDEILNAKPIDRRQIIEESAGVLKYKKRKAESINKLDHTEDNLTRVEDILYDLEGRVEPLKEEAAIAKEYQQLSKQMEQSDVIVTVHDIDQYNEDNRQLDNRLNELKSQQADKEAQQAQINQLLQKFKGERQQIDHDIEKLNYELVKTTETYEQLAGKLNVLEERKKNQSETNARYEEELENLNEHIKSIDEEKRQNEEILSELKDKQKQLNKEVQDLESLLYVSDEQHDEKLEEIKNNYYTLMSEQSDVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKEIQNNITETEKNYKASKKEMSEAEQQINRLEKELTASKKLQSEYEDKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKNNELNGIHGAVAEVIDVPSQMTQAIETALGASLQHVIVDSEKDGRQAIQYLKQRGLGRATFLPLNVIKPRQIASDIKDIARNTDGFINIASDAVKVSSKYQSIVENLLGNTIIVDDLKHANDLARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRHQLEAYQRQTAEFERHFKEQKDKAEKLSEQYFDASQQYNTLKEKVHHHELELDRLRTQETHLKNEHEEFEFEKNDGYQSDKSKETLTQKQTRLSEIQQQLSELESDIERYTQLSKEGKESTTQTQQQLHQKQSDLAVVKERIKSQKQAIERLDKQYESTQLQIKDVQEKIRLFNSDEMMGEQAFENLKSQIQEQEEERDRLNHQLTDIKQQRIELNETIERNESQLQECHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDVYQLTVERARTLYESDEPIESLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIINEMDREVEGRFKETFHAVQSHFTTVFKQLFGGGQAELRLTEDDYLAAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSEQTQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_CP051643.1|WP_002442517.1|836344_837601_-|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSGKSEDDIQKELTEDVESDASSDSDTSTESDDLNLNETAEDSKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDEHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLQVWGERVGVEVVSQSEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVISRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKLDDLQPFNPESYVYGLFADMIEQNEDIPDELVESSNETEEGTQDGPK
>NZ_CP051643.1|WP_002442519.1|836025_836358_-|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTQKQRNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLGLYRRFEKRQEIYNLMKQSLNQPDLLKQYIKQLEELE
>NZ_CP051643.1|WP_002442522.1|834626_835994_-|signal-recognition-particle-protein
MAFEGLSERLQSTMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSDRALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPMLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVPPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDDQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRDSSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_CP051643.1|WP_002439483.1|834135_834411_-|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_CP051643.1|WP_002442524.1|833508_834012_-|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTATRFQPGENLIVKHNNNDIQYTIASYRIHKGFHMLKFEGINNINDIEHLKGDYLYQERDHEDIELDEHEYYYSDIIGCTVFDDNNTPIGRVINIFETGANDVWVVKGDKEYLIPYIEDVVKDIDVEGKSIRITPMEGLLD
>NZ_CP051643.1|WP_002442526.1|832771_833509_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKEIIDVNAINFRDYSVNKHNQVDDYPFGGGQGMVLKPEPVFNAMQDLKRDENTRVILMCPQGRPFTQEIAQELSEAQHIVFICGHYEGYDERIREHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNEASHQDDSFSDGLLEFPQYTRPREYKEMKVPDVLLSGNHAHIEEWRHKQKLIRTYEKRPDLLEKYELTNNDKEILETYKKQLKNN
>NZ_CP051643.1|WP_002436293.1|832316_832667_-|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_CP051643.1|WP_037541397.1|842904_843639_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MSKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVDSFAIQANVANGDEVKAMIKEVVSQFGSVDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRGGSIINLSSVVGAVGNPGQANYVATKAGVVGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKDQMLEQIPLARFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_CP051643.1|WP_037541396.1|843631_844558_-|ACP-S-malonyltransferase
MSKTAIIFPGQGAQKVGMASDLYNEETRSTEILNQAQTSLDFDLLETMFTDEEGKLGETENTQPALLTHSVALLTALKDLNADYTMGHSLGEYSSLVASGVLSFEDAVKIVRKRGQLMAQAFPNGVGSMAAVLGLDYEEVDKICKDLSNEDELIEPANINSPGQIVVSGHKTLIDKLVEEGKSLGAKRVLPLAVSGPFHSSMMSVIEEDFASYINQFNWNDAQFPVVQNYNAQGETDAEVIKHNMVKQLYSPVQFIKSTEWLIEQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNENE
>NZ_CP051643.1|WP_037541395.1|844550_845537_-|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDKEQYNLNHDRIDFRHCSEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGINNPSVSLLNIGTEAAKGNSLTKKAYELFEKNNSFNFQGNIEAKTLMDGNTDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMGSLKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIRQAKIAGEENIVQTMRETVGGKSE
>NZ_CP051643.1|WP_044466285.1|845529_846099_-|transcription-factor-FapR
MKLKKDERRIAIRNAIEANPFITDNELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGQIKSIEANEIIGDLIQVEPDVKAQSLIEITEDYVFAKTQIARGHILFAQSNSLCVALIHNPTVLTQESQVEFVEKVKLNDTVRAEAQVINKTSKHYVIEVNSFVKDKLVFKGKFKMFYISEDEFNG
>NZ_CP051643.1|WP_002442500.1|846441_848490_-|ATP-dependent-DNA-helicase-RecG
MTKVHLIESPYTLDKIKGIGPKRLTLLEELNIHTVEDLVLYLPTRYEDNTVIDLNQAEDQSTVTVQGEVYSTPAVAFFGRNKSKLTVHIMVNNIAVKCVFFNQPYLKKKIELHGTVTVKGKWNRAKQEINGNRMFFNEQTTQDDVQLEPVYRIKEGIKQKQIRDNIRQALEDVTIHEWLSDDLREKYKLETLEYTLRTLHHPKDKQSLLRARRTYAFTELFMFELRMQWLNRLEKTSDEAIEIDYDINKVKEFIDHLPFELTDAQKTSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIELFRDTMNVALLTGSVKGKKRRILLEQLENGSIDCLIGTHALIQDDVIFENVGLVITDEQHRFGVNQRQSLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIITSWAKHERYDQVLTQMTSELRKGRQAYVICPLIESSEHLEDVQNVVALYESLQQYYGTEKVGLLHGKLTAEEKDDVMQRFSNHEIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANIVEDYRMLEVARDEAAQLIQTGQFFQNNYTQLRNFIQNNLLDTNFD
>NZ_CP051643.1|WP_002442499.1|848712_849567_-|thermonuclease-family-protein
MEKIIFLLLLLTLCSVVISVQKYVTRKYNVKSTHFFSLILIFTILLSTLGQSLNLNQAQAANGLHKEKATLVKVVDGDTVKLNYKGKVATFRLLLIDTPETKDPRKPVQKYGPEASAFTTKMMTNAKKIEVEFDKGQKTDKYGRYLAYVYADGVMVNNALVRDGLARVKYVYPPNNTYEKMIRESEAKAKTEKLNIWSEENAVNTSLTSAKNIKTAKHTATTKKSITHYSSKKSKKSSRAKAKKEYFKNCTALRKKYPHGVRKGHPAYQPKLDRDKDNYACEVR
>NZ_CP051643.1|WP_037541391.1|849844_850912_-|Glu/Leu/Phe/Val-dehydrogenase
MIFETMEQKDYEQIVFCQDKATGLKAIICIHDTTLGPALGGCRVRNDYASEQEAIEDAMNLARGMTYKNAAAGLDLGGGKTVVMGAPDKENEEAFYRALGRYVNTLNGRYYTAEDVGTSEHVMNLIYKETPYVCGTSKSFGSAGNPSPMTAYGIYIAMKRTAKEKFENESLEGKTVAVQGVGHVSYELCRLLNEDGVNLIVTDINKDNAQRAVDDFNAQFVEPDDIFSVDADIFAPCALGGILNDDTIPQLKVKAVCGSANNQLKDEDAHSKMLEDKGILYAPDYIVNSGGVINTADELNGYNEDRAKESIEGIDQILKHIFDISKEQNETPLEASQHFAEKRMEQMSHIHDIRK
>NZ_CP051643.1|WP_002442495.1|851148_852807_-|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIENEKEINAQQLADSFQAGVETAYKAVMKPVEGTILTVAKDAAQAAVEKAQDTEDCVELMEHTISAAKESLDNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKVEAKTPKLDTETLVNEDHDFHGVINTEDIVYGYCTEMMVRFGKNKKPFEEQEFRNDMSEFGDSLLVINDDEIVKVHVHTEHPGDVFNYGQQYGELIKLKVENMREQHREVIRKEQNGQDRKDQDAPQTVETAVITISMGEGISELFKSMGATHIISGGQTMNPSTEDIVKVIEQSKCKRAIILPNNKNILMASEQAASIVDAETVVIPTKSIPQGITALFQYDEASSLDENKNHMETALETVQSGSVTFAVRDTKIDGIEIKKDEFMGLAEDKIVTSDADQFTAVKGLLEKLLSEDSEILTMIIGEDSNQSVTDQLIEWIESTYPDVEIEQHEGGQPIYQYFFAVE
>NZ_CP051643.1|WP_037541388.1|852821_853196_-|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNEVIASVVGGKAVESYGIVGMASRQQVRDGIAEILGHENYAKGIKVREENGTIDVDMYIIVSYGVKISEVASNLQSTVKYTLEKTLNVKVNSINIFVQGVRVNDTGKKL
>NZ_CP051643.1|WP_002435210.1|853574_853763_+|50S-ribosomal-protein-L28
MGKQCYVTGRKASTGNNRSHALNANKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV

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Crispr_ID: NZ_CP051643_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_4

1352679-1352779

Orphan

Consensus_repeat	Method
TTCTTATGCAATGGACACCAGTCCATTGTAATCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_4

>merge|NZ_CP051643|4|1352679-1352779|CRISPRCasFinder
TTCTTATGCAATGGACACCAGTCCATTGTAATCCTAACTGAAAATGACTTATTTTTTCCTTAGTACTTCTTATGCAATGGACACCAGTCCATTGTAATCCT

>NZ_CP051643|4|4|1352679-1352779|CRISPRCasFinder
TTCTTATGCAATGGACACCAGTCCATTGTAATCCT	AACTGAAAATGACTTATTTTTTCCTTAGTAC
TTCTTATGCAATGGACACCAGTCCATTGTAATCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_037541167.1\|1353035_1353722_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP051643.1\|WP_002441405.1\|1347633_1348077_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP051643.1\|WP_037541169.1\|1349920_1351549_-\|ABC-transporter-ATP-binding-protein/permease	unknown	unknown	gnl\|CDD\|227321
NZ_CP051643.1\|WP_037541170.1\|1343337_1344888_-\|DASS-family-sodium-coupled-anion-symporter	unknown	unknown	gnl\|CDD\|279307
NZ_CP051643.1\|WP_002441415.1\|1341622_1342996_-\|deoxyribodipyrimidine-photo-lyase	unknown	unknown	gnl\|CDD\|223492
NZ_CP051643.1\|WP_002441378.1\|1358722_1359931_-\|sugar-efflux-transporter	unknown	unknown	gnl\|CDD\|341024
NZ_CP051643.1\|WP_002441407.1\|1346482_1347409_-\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP051643.1\|WP_002441417.1\|1341267_1341546_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_037541529.1\|1354188_1354755_+\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|129813
NZ_CP051643.1\|WP_002441386.1\|1356235_1356691_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002441395.1\|1353728_1354175_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP051643.1\|WP_002441384.1\|1356748_1357204_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP051643.1\|WP_002441398.1\|1351775_1352648_+\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP051643.1\|WP_002441411.1\|1345091_1346033_-\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|180477
NZ_CP051643.1\|WP_002441387.1\|1355782_1356079_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002441382.1\|1357349_1358039_+\|DUF1129-family-protein	unknown	unknown	gnl\|CDD\|368981
NZ_CP051643.1\|WP_002441390.1\|1355100_1355661_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP051643.1\|WP_002441409.1\|1346168_1346465_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002441380.1\|1358227_1358716_-\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|225395
NZ_CP051643.1\|WP_170080867.1\|1348220_1349918_-\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_037541167.1\|1353035_1353722_+\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	0.00293185
NZ_CP051643.1\|WP_002441405.1\|1347633_1348077_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.24109e-19
NZ_CP051643.1\|WP_037541169.1\|1349920_1351549_-\|ABC-transporter-ATP-binding-protein/permease	gnl\|CDD\|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	1.46323e-178
NZ_CP051643.1\|WP_037541170.1\|1343337_1344888_-\|DASS-family-sodium-coupled-anion-symporter	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	8.45715e-93
NZ_CP051643.1\|WP_002441415.1\|1341622_1342996_-\|deoxyribodipyrimidine-photo-lyase	gnl\|CDD\|223492	COG0415, PhrB, Deoxyribodipyrimidine photolyase [DNA replication, recombination, and repair].	1.17589e-151
NZ_CP051643.1\|WP_002441378.1\|1358722_1359931_-\|sugar-efflux-transporter	gnl\|CDD\|341024	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters. This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.74373e-100
NZ_CP051643.1\|WP_002441407.1\|1346482_1347409_-\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.00108e-71
NZ_CP051643.1\|WP_002441395.1\|1353728_1354175_+\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	6.61081e-73
NZ_CP051643.1\|WP_037541529.1\|1354188_1354755_+\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|129813	TIGR00730, LOG_family_protein_YJL055W, TIGR00730 family protein. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions. [Hypothetical proteins, Conserved].	1.76076e-58
NZ_CP051643.1\|WP_002441380.1\|1358227_1358716_-\|DUF456-domain-containing-protein	gnl\|CDD\|225395	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown].	9.24315e-35
NZ_CP051643.1\|WP_002441384.1\|1356748_1357204_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.67602e-11
NZ_CP051643.1\|WP_002441398.1\|1351775_1352648_+\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	7.35059e-101
NZ_CP051643.1\|WP_002441411.1\|1345091_1346033_-\|malate-dehydrogenase	gnl\|CDD\|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NZ_CP051643.1\|WP_002441382.1\|1357349_1358039_+\|DUF1129-family-protein	gnl\|CDD\|368981	pfam06570, DUF1129, Protein of unknown function (DUF1129). This family consists of several hypothetical bacterial proteins of unknown function.	0.000481187
NZ_CP051643.1\|WP_002441390.1\|1355100_1355661_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.88174e-31
NZ_CP051643.1\|WP_170080867.1\|1348220_1349918_-\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	7.50297e-178

>NZ_CP051643.1|WP_002441398.1|1351775_1352648_+|undecaprenyl-diphosphate-phosphatase
MFLIELIKGIILGIVEGLTEFAPVSSTGHMILVDDMWLKSTKFLGEQSAFTFKVVIQLGSVFAAAWVFRDRFLEILHIGHHKPDNQASVQRRSQPKRLNLMHVLVGMIPAGILGFLFDDLIEKYLFSVPTVMIGLFLGAIYMILADKYSEKVQHPQTVDQINYFQAFVIGISQAIAMWPGFSRSGSTISTGVFMKLNHKAASDFTFIMSVPIMLAASGLSLLKHYEYIHLAHIPFYLLGFLAAFIVGLIAIKTFLHLISKVKLIPFAIYRIVLVVIIAILYFGFGIGKGI
>NZ_CP051643.1|WP_037541169.1|1349920_1351549_-|ABC-transporter-ATP-binding-protein/permease
MKKLTNLVFKYKIYPVLMCIVSIFLSITVVIQNISIARFLNHVLYNHKQPLIYLFIVILVVLIARATFNMLNQRIGDHMAYKVKTDLRRQVINKNSPRAIGEQMNILTESIDGIAPFFQSYLPQVFKSMMIPVAIIIAMCFVHLPTALIMMVTAPFIPMFYIIFGLKTRDESKDQMTYLNQFSQRFLNTAKGLITLKLLNRTKQTKAHLYEDSTRFRDLTMRILKSAFLSGLMLEFISMLGIGLVALEAALSLVVFNSISFVTAAIAIILAPEFYNAIKDLGQAFHTGKQSEGSSDVVFDFLEAEDQLPSPTPKVNNNQEPQIKVENVSYRYPGSEQYALRNINITIYQNDKIAIVGPSGAGKTTLAHILSQSVKPSDGEAIFNMEETRIGFLSQNPYIFTDTIKNNIAMYDYEISDEDIIQVLDEVGLKDKVLTLKDGIDTRIGEGGEMLSGGQMRRLELSRLLLMKPELVIFDEPATGLDIETERTIQAVLQDHFKETTMLIIAHRDTTINQAERRIYLENGQLIKDDATISVSQSEVNR
>NZ_CP051643.1|WP_170080867.1|1348220_1349918_-|thiol-reductant-ABC-exporter-subunit-CydC
MKPHIHFRIDKDLILAILVGVLGGLVALAMFFLSGYMVTQSALGAPLYALMVLVVSVKMFGFLRAITRYIERLLSHKTTFTMLRDVRVQFLEKLIPVVPDVYRKFNSSDLISRMISRVEALQNIYLRVYYPPVVIGLTAIVSIITFIFFTPMHALLIVVSMILTLWIVPWLSAKRARTLKQQVALQQSDFLQRFYDYKEGNEELKRFKQTHTFKTDVLNHLEHFDALQARERRFLSLYDYMLNLIAMISIFLSLVIGAQQVHAGHLDVVYLTSIVLMVLTLFEQAVPMSNVAYYKADTDQALAEINEVIDVSESRDDAHFESEKTKTELFEVEHVTFKYWNQQTPVLHDINLTIKKGEKVAIIGPSGSGKSTLLQVMLGLYQVEQGHVTLNGQVVTDIDNEEKYRYINGMLQSQHMFDGTVRDNLFSDKEDAELEGVLQSVGLGYLDLDRNVSLNGENLSGGEVQRLSLVRLLLRDDARIWILDEPTTALDIDNTKKVMNLIEEASETLIVATHDLDVLSRFDKIVVMLDGEMKEIGSYDRLLNEDSYLHQMLELNNKTSPLVKD
>NZ_CP051643.1|WP_002441405.1|1347633_1348077_+|MarR-family-transcriptional-regulator
MSDQHNLKEQLCFSLYNAQRQVNRYYSNKVFKKYNLTYPQFLVLTILWDESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQREVFIHLTDKSEMIRPELSSASEKVATASSLSKEEVKELNRLLGKVIDAFTEAKEK
>NZ_CP051643.1|WP_002441407.1|1346482_1347409_-|GTP-binding-protein
MRNNKDEKISISIISGFLGSGKTTLLTHYMSELLKIDEKISVIMNEFGSFDVDGNHLTDMVEVYSILNGCVCCDLKLDLVNQLEVLINEKDVNHIIIEATGIAHPIEIIMACQDPRIVQYVHQPQVIGVVDAERFLNREQYTESTKRLMEEQLEVSNVLIVNKIDLISEEEQQHLEEALNRINANVPHILTTYGKVDVSKLSQFRDEVVTQHTHSHHHGINSMQYTFSGPIDRQLFYQFILRLPDEVLRLKGYVQFRDHPNATYEFQYAYGLPDYGVIDKVLPLTIVIIGEQLDVNRLRNKLDMLQFS
>NZ_CP051643.1|WP_002441409.1|1346168_1346465_-|hypothetical-protein
MNNEDKREKQIKFERNLITFPYLGFAIVVLLFNIFYPDIKVTMALFGIFFAYNLGMLFIAFIRHFKRTLILTLILTILSGAAFFTLLYVFGLRHDIFG
>NZ_CP051643.1|WP_002441411.1|1345091_1346033_-|malate-dehydrogenase
MSTRRKISIIGAGNTGSTLAFILAQKELADIVMIDRPQSEGFVKGKALDILESGPIFGFDTQVQGSVQIEDIQDSDIVVMTAGIPRKPGMTRDDLVQTNEEIVYQTSRNIAKYAPQATIIVLTNPVDAMTYTALKASGFPKERVIGQSGVLDTARYQCFIAEELQVSVKDINGLVLGGHGDTMVPLVESTQVNGVPVKDLISKEVLERIVERTRKGGAEIVELLGKGSAYYAPATAIYEMIEAILKDQKRLLPSIAYLDGEYGFSDICLGVPTILGNHGIEKIVEVNLNDKEQEQLQHSAQSVENVKNALKNN
>NZ_CP051643.1|WP_037541170.1|1343337_1344888_-|DASS-family-sodium-coupled-anion-symporter
MTKGNHEAQTQSQHSQSKKAYKPLWIIISFALLIGILLLPTPAGLPIMAKAALAILAFAVIMWVTEAVSYPVSAVLILGLIILLLGLSPVQNLSEKLGNPKSGDAILKGSELLGTNNALSHAFSGFSTSAVALVAAALFLAAAMQETNLHKRLALLVLSIVGNKTRNIVIGAILVSIVLAFFVPSATARAGAVVPILLGMIAAFNMSKESKLASLLIITSVQAVSIWNIGIKTAAAQNIVAINFINQNLGHDVSWGEWFLYAAPWSILMSIALYFIMVKVMPPERDAIEGGKELIKKELKDLGPVSAREWRLIVISILLLLFWSTEKVLHPIDSASITLIALGVMLMPKVGVITWKGVEKKIPWGTIIVFGVGISLGNVLLKTGAAQWLSDQTFGLMGLKGLPIIATIALITLFNILIHLGFASATSLSSALIPVFISLTSTLHLGDHAIGFVLIQQFVISFGFLLPVSAPQNMLAYGTGTFTVKDFLKAGIPLTIVGYILVIIFSLTYWKWLGLV
>NZ_CP051643.1|WP_002441415.1|1341622_1342996_-|deoxyribodipyrimidine-photo-lyase
MKVGVILNRVFRLENNPLFEYISQNKEDIDQCYFIIPQEKFDKEAEMKANYYYGTLQKFVDTLHDYDIQPFLVDYDELTHFCKDKGISEVVLAGDIMSYHEEKYDILQQSASFKNEGISVVSVRANHYFKPSKTRNNKGEPYKVFTSFYKKWRPYLMKRSVFSYDIKDIAKMGVKSQQKVKGDYSQYGISEADAQYRWSDFLDKDIENYNTNREYLPEVLTSQLSIYLAYGVLDIIQIFNDLLENYDKDEQNYESFIRELIFREFYYVLMTYYPETAHQSFKDKYRDLQWSYNKENFNLWKEGKTGFPIIDAAMGELNTTGYMHNRMRMVVSQFLTKDLFIDWTWGEEYFRQKLIDYDSASNVHGWQWSASTGTDAVPYFRMFNPVRQSERFDKDALYIKKFVQTLNDIDAKYLHDTHKYERQIKEQGIELGKDYPKQIVNHSESRTHVMSEFKALE
>NZ_CP051643.1|WP_002441417.1|1341267_1341546_+|hypothetical-protein
MIFNITLLIIILIVLQLIVGHFWHDIGFSYTQSILLMCLPLGIGLFLMQVFYYERRYPNWEVPLNIKLRLKYMYILTLLEYVAVYICLFILK
>NZ_CP051643.1|WP_037541167.1|1353035_1353722_+|hypothetical-protein
MDNKKLIKTLINVLPIVIVPLVVERKRIKEHPDVRKATDATSKATSKATSAISNKASDVKEYVGDKKQEYDNKRELKKIAKENDPEYIEKKGEKLAKKNRKEADKMDKKLQKNIEKRHKEEDKQREENQKQRIKDMKKSQKYEEKVGLTPGKLDDKTEKKGEKLEKDNRKDVKKLDKKLQKNIEKRHKKEEKQREEAKKARKKEFKKYDDYVADSVVKQNKESDDSKA
>NZ_CP051643.1|WP_002441395.1|1353728_1354175_+|YaiI/YqxD-family-protein
MTKVIIDGDACPVVNSVIELTEGTGIFVTVLRSFSHFSHQIQPEHVKTVYVDDGPDAVDYKIVQIATSEDIVITQDYGLASLLIDKVRVVMHHKGSIYRSDNIQSLLDQRYLNAQIRKQGGRHKGPPPFTREDRLKFEQAFSKIIKQL
>NZ_CP051643.1|WP_037541529.1|1354188_1354755_+|TIGR00730-family-Rossman-fold-protein
MRRIAVYCGASKGNDPSYVKEAYELGKYMAEQGYELVFGAGSVGIMGAIQDGVLDHGGKAIGVMPKMLDEREITSQKVSELILVDSMHERKNKMTELADAFVMAPGGAGSLEEFFEMYSWAQIGIHQKPIGVFNLNGFFEPLQALIEHMIKEGFIDKKYKKLAPLFDTKEALIEGLHNYKPLGVRTYD
>NZ_CP051643.1|WP_002441390.1|1355100_1355661_-|GNAT-family-N-acetyltransferase
MGTYIETERLKLRDWEEKDLLPFQQMNANRQVRRYFPSLLSYRRSELDMRKMDEIIKEKGIGLFAVELKETGEWIGFIGVNYLPKESKYPFKELPLYEIGWRLIPEVWGNGIATEGAEAVMDYAMEKGITELYSFTSETNLPSRKVMEKIGMTFLDNFEFPDLSKYHPLKRHVRYYKELLPSQSEG
>NZ_CP051643.1|WP_002441387.1|1355782_1356079_-|hypothetical-protein
MHEQDFNILEGKNLTLPELGRELENITGRTIVDSTSEIKRVIAHLPNFESDTDTFVATYRLNHQNDFIDATFTAPKEQRDRLKEIPVHVELISYISKA
>NZ_CP051643.1|WP_002441386.1|1356235_1356691_-|hypothetical-protein
MKKWLTLLLASTLMLTACGKSNEKASLEKSINQLEKENKDLKKQKKDLQTQKDKLKDKQDRLQKDIDELPAEDTSKKSSKESKSNSSKENGSDEASSNDSKQSTETSKSDQSKASSKDAKQSSEQNQNVDKKTQDKASTNKNKDSKSTSNS
>NZ_CP051643.1|WP_002441384.1|1356748_1357204_-|GNAT-family-N-acetyltransferase
MKVITIEDKIWLNEIAKIHEHLISENESNYQVTTTSISLRYEMLKARLKYSQDAIFVSEQNTTLEGFIWAHYEPQMSVVQIEVLYVKPEYRKQSIATHLKNTIEEWAISIGATVIESTVNIDNHSMIQLNNHLGYHTTHLKMTKNLKGKNE
>NZ_CP051643.1|WP_002441382.1|1357349_1358039_+|DUF1129-family-protein
MKSTAQLTKENNVKSLRLNNTDREIFENYMTYIRADLSVNPHDSELMLNRILKHLIRAEDKGMLAMEFFDHDPKAHAKKELKSLPNETIRNIFKYIYHNFIFLIGIFCFLKGFIGFFIGGDSNYLYLYTFPITVIVGLFIIFLFIWMSFRTVQLQCFSNSYWVWWLTYGVIALLLVALFYVFFIPQSFLAFGPYINVSNWTFIIIAIVITPIAFYINHHFYNKDANTRV
>NZ_CP051643.1|WP_002441380.1|1358227_1358716_-|DUF456-domain-containing-protein
MSVILWILIILMFILAFVGLVKPIIPSILVMWIGFLIYQFGFNDGHLSWVFYVAMIIFTVLILIADFMMNKYFVARFGGSKLGEYTALAGVILGCFVFPPFGIILVPLVAVFVVELLNGFDVKNALKVSLGSVVAFLASTVAQAIIMVIMVIWFFIDVFLFN
>NZ_CP051643.1|WP_002441378.1|1358722_1359931_-|sugar-efflux-transporter
MFTALLQIKNYKLFVVNMLLLGMGIAVTVPYLVLFATKDLGMTTTQYGLLLALAAISQFTVNSIIARFSDTHNVNRKILIISALFMGAVSFSIYFYVHQIWLFIVLYAIFQGLFAPAMPQLYASARESINISSSRDRAKFANTVLRSMFSLGFLFGPFIGAQLIELKGYSGLFGGTIAIILFTLILQIFFYQNLPAEQQISSQQHVEKAAPNMFKDKTLLVPFIAFILLHIGQWMYTMNMPLFVTDYLKEKEGYVGYLASLCAGLEVPFMVILGILSAKLPTRTLLIIGSIFGGAFYFSIGVFKNFYMMLAGQVCLAIFLAILLGLGISYFQDILPDFPGYASTLFANAMVIGQLCGNLLGGAMSHWVGLENVFFVSAGSIFVGMVLIFFTKDQKITEENME

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Crispr_ID: NZ_CP051643_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_5

2152113-2152202

Orphan

Consensus_repeat	Method
AGAATTTCTACAGATTAAAATCTTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_5

>merge|NZ_CP051643|5|2152113-2152202|CRISPRCasFinder
AGAATTTCTACAGATTAAAATCTTAGTTGTTTAGAGGAATACAATAGACCAGGTCTATTGCATAAGAGTTTCTACAGATTAAAATCTTAG

>NZ_CP051643|5|5|2152113-2152202|CRISPRCasFinder
AGAATTTCTACAGATTAAAATCTTAG	TTGTTTAGAGGAATACAATAGACCAGGTCTATTGCATA
AGAGTTTCTACAGATTAAAATCTTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_002444386.1\|2152721_2153288_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274100
NZ_CP051643.1\|WP_037541810.1\|2159708_2160197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002444397.1\|2149156_2149861_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187585
NZ_CP051643.1\|WP_002444370.1\|2162852_2163716_+\|phytoene/squalene-synthase-family-protein	unknown	unknown	gnl\|CDD\|224478
NZ_CP051643.1\|WP_002444390.1\|2151715_2152093_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|226134
NZ_CP051643.1\|WP_002444404.1\|2145389_2146334_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|368185
NZ_CP051643.1\|WP_002444392.1\|2150860_2151679_+\|NmrA/HSCARG-family-protein	unknown	unknown	gnl\|CDD\|187561
NZ_CP051643.1\|WP_037541683.1\|2160196_2161687_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP051643.1\|WP_002444380.1\|2156955_2158362_+\|polyphosphate--AMP-phosphotransferase	unknown	unknown	gnl\|CDD\|274736
NZ_CP051643.1\|WP_002444378.1\|2158810_2159515_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP051643.1\|WP_044466419.1\|2161693_2162815_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_CP051643.1\|WP_037541685.1\|2149875_2150418_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP051643.1\|WP_002444382.1\|2155393_2156452_+\|PTS-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226167
NZ_CP051643.1\|WP_002444408.1\|2143167_2144232_-\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP051643.1\|WP_037541686.1\|2147179_2148016_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP051643.1\|WP_002444388.1\|2152271_2152502_-\|DUF896-domain-containing-protein	unknown	unknown	gnl\|CDD\|226677
NZ_CP051643.1\|WP_002444394.1\|2150548_2150848_+\|DUF2316-family-protein	unknown	unknown	gnl\|CDD\|226806
NZ_CP051643.1\|WP_002444399.1\|2148041_2149046_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|225070
NZ_CP051643.1\|WP_002444406.1\|2144460_2145318_+\|fructosamine-kinase-family-protein	unknown	unknown	gnl\|CDD\|225547
NZ_CP051643.1\|WP_037541684.1\|2153538_2154936_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_002444386.1\|2152721_2153288_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|274100	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator. The seed alignment for this family was built from a set of closely related uncharacterized proteins associated with operons for the type of bacterial dihydroxyacetone kinase that transfers PEP-derived phosphate from a phosphoprotein, as in phosphotransferase system transport, rather than from ATP. Members have a TetR transcriptional regulator domain (pfam00440) at the N-terminus and sequence homology throughout.	3.11368e-09
NZ_CP051643.1\|WP_002444397.1\|2149156_2149861_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187585	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs. PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.17117e-70
NZ_CP051643.1\|WP_002444370.1\|2162852_2163716_+\|phytoene/squalene-synthase-family-protein	gnl\|CDD\|224478	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism].	1.25073e-81
NZ_CP051643.1\|WP_002444390.1\|2151715_2152093_+\|VOC-family-protein	gnl\|CDD\|226134	COG3607, COG3607, Predicted lactoylglutathione lyase [General function prediction only].	7.16781e-41
NZ_CP051643.1\|WP_002444404.1\|2145389_2146334_-\|amidohydrolase	gnl\|CDD\|368185	pfam04909, Amidohydro_2, Amidohydrolase. These proteins are amidohydrolases that are related to pfam01979.	8.74391e-21
NZ_CP051643.1\|WP_002444392.1\|2150860_2151679_+\|NmrA/HSCARG-family-protein	gnl\|CDD\|187561	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs. NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.53065e-79
NZ_CP051643.1\|WP_037541683.1\|2160196_2161687_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	8.9818e-109
NZ_CP051643.1\|WP_002444380.1\|2156955_2158362_+\|polyphosphate--AMP-phosphotransferase	gnl\|CDD\|274736	TIGR03708, poly_P_AMP_trns, polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP). [Central intermediary metabolism, Phosphorus compounds].	1.58731e-138
NZ_CP051643.1\|WP_002444378.1\|2158810_2159515_+\|hypothetical-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.6475e-05
NZ_CP051643.1\|WP_044466419.1\|2161693_2162815_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	2.25146e-23
NZ_CP051643.1\|WP_037541685.1\|2149875_2150418_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.60515e-12
NZ_CP051643.1\|WP_002444382.1\|2155393_2156452_+\|PTS-transporter-subunit-IIC	gnl\|CDD\|226167	COG3641, PfoR, Predicted membrane protein, putative toxin regulator [General function prediction only].	1.78973e-104
NZ_CP051643.1\|WP_002444408.1\|2143167_2144232_-\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	2.2605e-175
NZ_CP051643.1\|WP_037541686.1\|2147179_2148016_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.24836e-18
NZ_CP051643.1\|WP_002444388.1\|2152271_2152502_-\|DUF896-domain-containing-protein	gnl\|CDD\|226677	COG4224, COG4224, Uncharacterized protein conserved in bacteria [Function unknown].	5.08635e-24
NZ_CP051643.1\|WP_002444394.1\|2150548_2150848_+\|DUF2316-family-protein	gnl\|CDD\|226806	COG4367, COG4367, Uncharacterized protein conserved in bacteria [Function unknown].	4.37145e-30
NZ_CP051643.1\|WP_002444399.1\|2148041_2149046_-\|amidohydrolase	gnl\|CDD\|225070	COG2159, COG2159, Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only].	1.36655e-59
NZ_CP051643.1\|WP_002444406.1\|2144460_2145318_+\|fructosamine-kinase-family-protein	gnl\|CDD\|225547	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown].	3.04228e-105
NZ_CP051643.1\|WP_037541684.1\|2153538_2154936_+\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	0

>NZ_CP051643.1|WP_002444390.1|2151715_2152093_+|VOC-family-protein
MMHSMWFNLNVKDLDRSEQFFKTLGFEINKNPDMLDKMVGISIGQTIVILIENNHFESVSHQEVDAHPNEVMISLGVKENKEVDELVEKVESAGGTIIDPPGVKQGYYGAMFADPDGHKFNFLVC
>NZ_CP051643.1|WP_002444392.1|2150860_2151679_+|NmrA/HSCARG-family-protein
MTKSILVIGATGKQGNAVVKQLLEDGWHVRAFTRNKNNEKLTSIENEHLEIFEGDLSNEDSLAQAMQDQYGLYSVQPIIPDNVEEELRQGEMIIDTAERQGVNYVVYSTAGGVNRDRTGPHFEALAQLENKIKASRLNFTIIKPSFFMDNFLRITKVENGEIKIPEFINPNVKFAMISSIDIAKIASTLFEDAESYNHQELEIASDELTLNEVVKTFATVTGKPTEIEGAFSSGTAERSWLEEKGYVIDFVQMERINPTRLTLDKWIAEVDF
>NZ_CP051643.1|WP_002444394.1|2150548_2150848_+|DUF2316-family-protein
MSLNKEQRRITAIELQEHFNESTLSMEDIANKMSISVEEVEKVLNMNAPNGFFGNQLQRFIHLVWDIRDVMNSNIKENGDTPEEYTYLKGEKEDYWFLQ
>NZ_CP051643.1|WP_037541685.1|2149875_2150418_-|TetR/AcrR-family-transcriptional-regulator
MRKDALENRQRIEEKAIELFKEHGVDTVSMNRISKELGIGMGTLYRHFKDKSDLCYHIIEHDFDEIIHQMKRVASTSQSKEEIMKQSLDVFLKFKFENSDLLNCIEESNTKTQFHHSQFFSDLFDFYYDLFHDGHDERWATFKTDMLLKSLSTKAYEIQRSKRQLSNNEIRDNLMRLYLN
>NZ_CP051643.1|WP_002444397.1|2149156_2149861_-|SDR-family-NAD(P)-dependent-oxidoreductase
MDRVTLITGGNKGLGYEAAKELKAKGYKVYIGSRNEERGQKASNELGVDYVQLDVSDDESVQQAFKTLSEKEGRVDVLINNAGISGGFAKVADITVEDVEKVYNTNVFGIVRMMNTFIPLLEQSQQPVVVNVSSGLGSFGMVTNPDKAESKVNSLAYCSSKSAVTMLTLQYSKGLPHMQINAADPGSTNTDLVGDFSNNSKPASEGVKPIVELATINADGPTGTFIDGDGPMPW
>NZ_CP051643.1|WP_002444399.1|2148041_2149046_-|amidohydrolase
MKSINFEEHYVVDDIQKETMKYMSSDPNGVPMQTMLKGLEQKSGFTNADDITKHDERIKFMDEHDVEMQVLSYGNGAPSNLEGERAIELCQQANDTLAKYVNEHPDRFVGFATLPINEPQAAVEEFKRCIKELGFKGALIMGHPKNGFLDQDQYDDLFATAEALNVPIYLHPSPVQSDVYQAYYKGNYSDVTAATFACFGYGWHVDVGIHAIHLVLSGVFDRHPNLNMIIGHWGEFVPFFLERMDDILFADHLEHPISYYFKNNFYITPSGMLTKPQFDLVKAEVGVDRILYSADYPYVEPDKLGTFLDELDLTEEEKEKISYKNGAKLLGLEK
>NZ_CP051643.1|WP_037541686.1|2147179_2148016_-|alpha/beta-hydrolase
METLELHGAKLRYHKIGKGPVLILIPGANGTGDIYMPLAKQIQDHFTVVAVDRRGYGQSELTEPLPEEVSNPDSRYRVKRDAQDIAELAKSLSDEPVYVLGSSSGAIVAMHVLKEHPDVVKRIAFHEPPINTFLPNAKYWQDKNEEIIDIAVNEGMPQAMKLFGETLKTSQLDQQYMSKPAQSEDDAESKKRFEEMLGWFKYEIRQYTESDISIEDLNQHKDIITLLNGTDSKGSFPQEVNFFIKDETGIEIVDIPGGHLGYIQKPEGFAEVLLNIWN
>NZ_CP051643.1|WP_002444404.1|2145389_2146334_-|amidohydrolase
MKKIDLHAHYISPGFSQFLDDYFDGKGDGVKTPPFSPESYINLMKEQDIEYGVLSISSPHISAAPDDKMLELAEEVNTYAADITQQYSDQIGFFATLPLPLAEESVNTIDKALDDQQALGFTLPTNARGVYLGDERLDPVLEKLNERQATVAIHPNEPKPAIKAMSEEVPPPLMEFIFDTTRTIIYMSQKNVFSKYPNIKWIVPHCGALLPVIAQRVAMGNKMFGSEKQPDDLEQVMKNLYFDLAGKVLPYQLPTLLEMVDPDKIVYGSDAPYTTNQVVSMLANEIESTDLITIDSKIHMLYDNGKALLDKMKY
>NZ_CP051643.1|WP_002444406.1|2144460_2145318_+|fructosamine-kinase-family-protein
MKAEWKEELPLEGIKDISPVSGGDVNEAFKVTTTEDDIFFLLVQRHRPESFYAAEIAGLNEFENAGVTAPRVIASGEINGDAYLILSYLEEGGRGSQRELGQLVAKMHSQQQPDGKFGFSLLHEGGDISFDNTWTDTWKEIFIDRRMDHLRDELMRKGLWNEEDNNVYEQVRTVMVNELDNHESKSSLLHGDLWGGNYMFLTDGSPALFDPAPLYGDREFDLGITTVFGGFTEEFYDEYEKHFPLAKGAQKRLEFYRLYLLMVHLLKFGGMYAASVNRSMDTILE
>NZ_CP051643.1|WP_002444408.1|2143167_2144232_-|quinone-dependent-dihydroorotate-dehydrogenase
MYKLVKPFLFKLDPERAHGMTIDALKTVQKFPIMYSVMDKLFNYSNPILAQTIHGIKFNNPIGLAAGFDKSCEVPKALEHVGFGAIELGGITPKPQPGNPKPRMYRLVEDNALINRMGFNNIGMNKALSNIRRHAYTIPVGINVGVNKNTSYEDRYQDYIKVIDTFKNDVTFFTVNISSPNTENLQNFHDKDEFSMLCEALTHFKSENEINVPIFLKLTSDMELEGFKNILPSITKTFDGVILANTTRQRDGLTSDNKTEEGGLSGKPLFERNLKLVKYAYQETQGKFLIIGTGGIFSSEDAIKMLRNGASLLQIYSSLVIEGPGLTKKINKEIAQYLTENNYHKVSDIIGLDA
>NZ_CP051643.1|WP_002444388.1|2152271_2152502_-|DUF896-domain-containing-protein
MKLLDRINQLANKEKVESLSIEEKQEQHQLRQEYLKMIRGQVLTTFSTMKVLDPLGQDVTPDKVYELRKEYGNIQE
>NZ_CP051643.1|WP_002444386.1|2152721_2153288_-|TetR-family-transcriptional-regulator
MDATKIDPRIIRTKKLLVNAFQKVSREKKLSQVSVKDITDEATVNRATFYAHFTDKYDILDYTLSVTILKDLNDTLNISEVINEEILSNIFISIAYYMVEVQDSCEMNSEEFCNQAHKRINNELEDIFTIMLENSFPSHEREILVNSASFLAAGVCGLAKHWLETSKLTPETFIKKNLPFLIQHITQL
>NZ_CP051643.1|WP_037541684.1|2153538_2154936_+|amino-acid-permease
MADKLQRELSNRHIQLIAIGGAIGTGLFLGAGASIHLAGPSILLTYIIVGFILFMFMRAMGELLLSNLGFKSFGDIAHHHIGSMAGFMVGWTYWLTWIISGMAEVTAVAKYVDFWYPEMPNWITAAATILILVALNLFSAKLFGELEFWLSIIKVITIFALIIIGIVMIVFAMKTQYGPATVTNIWKEGGFFPNGASGFFMSFQMAIFSFIGIELIGITAGETKDPHTTIPQAINNVPFRILIFYIGSLAVIMSVVPWDKLNPDDSPYVKLFGLIGIPFAAGIINFVVLTAAASSCNSGIFANSRTMFGLAGRKQGPAFLHKTNKNGVPYYAILVTCGLLSISVILNAIFKDATKVFVQITTFSTVLNILIWAVIMVAYLGFLKHNPELHKESNYRMPGGKYMAYGILVFFAFIFVILLINSSTRLAVLSIPVWIGVLFLMYQKYKKESRKTEIPTETEEDVEEA
>NZ_CP051643.1|WP_002444382.1|2155393_2156452_+|PTS-transporter-subunit-IIC
MSAIRNIDGPKDFIFRVLSGVAIGIVAGLVPNAILGEIFKYFMQYHPIFKTLLGVVQAIQFTVPALIGALIAMKFNLTPLAIAVVASASYVGSGAAQFKNGAWVIAGIGDLINTMITAAIAVLLILLVEERVGSMALIVFPTIIGGLSATIGVFTLPYVRLITTGIGNMLNSFTELQPVLMSMLISMVFSFIIISPLSTVAIAMAIGLSGIAAGSASIGIAATEAVLLIGTSQVNRLGIPLSIFFGGVKMMMPNMVKYPVIMVPIFITAALSGIASGMIGIGGTKESAGFGFIGMVGPINAFKFMHVDSPWLSVLLIVVAFFVVPFLVAWILDLLLRKVIRLYSNDIFKFMG
>NZ_CP051643.1|WP_002444380.1|2156955_2158362_+|polyphosphate--AMP-phosphotransferase
MSYNIEALQLKVAQLSRKTHELGIPVMILFEGVPASGKTRLSNELLLNLDAKYTDFIATKSPEAHNLRYQFLQKYWNTLPQKGNINIYFRSWYSHYLDYKENQIKQNQYSNYDVLIRQIDDFENMLKKDNYEIIKFFIEINEEKRQEHIEQTKENPLMKWKVQEYEKVIPQDIYISEMRQIINDSDDWKVIDYTERKQAIENMYLHIIERLESAIDNFQTHESVIDGNFNKNFSTSLFDIEVPKIHKKEYKDQMEILQNRMRELQFALYERKIPLVLVFEGMDAAGKGGNIKRIREKLDPTGYQVHGISAPTDVEKNHHYLWRFAKEMPKSGHVEIFDRSWYGRVLVERVEGFAEQAEWKRAYKEINQFEQMWTDEGALIIKFFLCLDKKEQLKRFKDREKNPDKQWKITHEDWRNREKWDLYLEASYDMIKHTNMNEAPWHVIPADHKKTSRIKVLQTIINRCEEVL
>NZ_CP051643.1|WP_002444378.1|2158810_2159515_+|hypothetical-protein
MKKTVISTSLALSLGVAGFALTGHEAHASEATNVDQAHLADLAQNHPDQLNAKPVQAGAYDIHFVNNGFEYNFTSNGTNWSWSYQAAGSQSSSADYTQSYNQESSNQSVSSNTQSSNTNVEAVSAPTTSHHNYSTSTTSYSAPSSSSASTGGSVKAQFLAAGGTEAAWNAIVMPESGGNPNAVNPAGYRGLGQTMESWGTGSVASQTKGMINYANSRYGSLSNAIDFRASHGWW
>NZ_CP051643.1|WP_037541810.1|2159708_2160197_+|hypothetical-protein
MKNIKKLAQLVILHSVFWFSVQMSIAQLGTRIPLRFFDKNAHFFRPFQWEKGGQIWGDTLQISKWKKLIPEGTKLNSAIYDKSDLTNNIEETRHLLLEMRRAELVHWLSMVPLIVFIKTSKYIKYINLLYVVFSHVPIIIVQRYNRPRIERFIRLVEKRGKK
>NZ_CP051643.1|WP_037541683.1|2160196_2161687_+|NAD(P)/FAD-dependent-oxidoreductase
MTKSVIVIGGGLGGIAAAIRMAQSGFNVKLFEQNNHIGGKVNRLDESGFGFDLGPSILTMPYIFEKLFNYSDKKMSDYVEIERLPLQWRNFFSNGETIDLYENNEATVLNNVQLNEKDKAELDRYFKYTERIYRFTEKGYFNHGLDTLPEILKYHGPLKALHGFDYFSTMQQAIHRYISNPRLREILGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVKGGIHHLAQALEQLAIEEGVELHTGTSVNNIKTYHHNVTGVRLANGDIVEADYIISNMEVIPTYKYLLHFSQQKIDQLEKTYEPASSGYVMHLGVNRSYPQLAHHNFFFSNDSKRNYDEVFHQKVLPQDPTIYLVNSNKTDLQQAPDEFENIKVLPHIPYIQDKPFKKEDYEAFKTRVLTKLEKMGLTDLRKHMIYEDMWTPEDIRQHYHSHRGAIYGVVADKKKNKGFKFPKHSKYFDNLFFVGGSVNPGGGMPMVTLSGLQVADKINAIEAQKE
>NZ_CP051643.1|WP_044466419.1|2161693_2162815_+|glycosyltransferase-family-2-protein
MKMIQFILTILSTISLICGRLIFNQRHRLLSSQSPIIHSNEVTIIIPARNEERRLPHLLQSLQGQQGIYEVIVMDDGSKDNTKEIAQTFGATVYETEQNFDRQWFGKSHACYQGATNAQSELLMFVDADVTFGHPHAIEKILNTYRKQHNHGLLSVQPFHETGKFYESLSAIFNLMTVVGVNQFSSLARQSNNDIAFGPITLMHRDDYFKTDGHKNAQHSIIEGFALGEKFESVQLPVTVYEGGNDVKFRMYEDGIQSLIQGWTKHFSVGANKTQPQIMLAIVMWLMGSITSTLTLLISVFTKPASRIVSYLFYVLYTCQFVRLHRRVGAFSMVLLILHPVLFIFFIFIFANSWRHTHFSKKVEWKGRSFKIN
>NZ_CP051643.1|WP_002444370.1|2162852_2163716_+|phytoene/squalene-synthase-family-protein
MTTNEENFKYCHQIMKEHSKSFSYAFDFLPEQERQAVWVIYAVCRIIDDSIDVHENPQILKDIHEDISYIENTSDISHHEFKSNQSIMVALYVVSQHYTIEYQSFYNLIQSVYEDQNFEMFETDEALLNYCYGVAGTVGEVLTPVLAQSPNKETYATARKLGEALQITNILRDVGEDFENGRIYFSESSLARFDVSIENEFNHRISNQYIDLWEYFAAIAEDDYEIALSNIDTFNKEAQPIIELAAVIYRAILDEVRKASYTLHRRVYVSKLNKAKLYRKIKNKYQL

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Crispr_ID: NZ_CP051643_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_6

2170531-2170673

Orphan

Consensus_repeat	Method
TTTCTTGAGGAAATCCTCTGTGTTGGGGCCCCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_6

>merge|NZ_CP051643|6|2170531-2170673|CRISPRCasFinder
TCTTATGAGGAACCCCTTGTTGTTAGGGCCCCAACTTGCATTGCCCGTAGGATTTCTTGAGGAAATCCTCTGTGTTGGGGCCCCGACCCCAACTTGCATTGCTTGTAGGGTTTCTTGAGGAAATCCTTTGTGTTGGGGCCCCG

>NZ_CP051643|6|6|2170531-2170673|CRISPRCasFinder
TCTTATGAGGAACCCCTTGTTGTTAGGGCCCCA	ACTTGCATTGCCCGTAGGATTTCTTGAGGAAATCCTCTGTGTTGGGGCCCCGACCCCAACTTGCATTGCTTGTAGGG
TTTCTTGAGGAAATCCTTTGTGTTGGGGCCCCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_037541809.1\|2166991_2169379_-\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP051643.1\|WP_002444352.1\|2170032_2170428_-\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_CP051643.1\|WP_002444350.1\|2170732_2171602_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187613
NZ_CP051643.1\|WP_002444370.1\|2162852_2163716_+\|phytoene/squalene-synthase-family-protein	unknown	unknown	gnl\|CDD\|224478
NZ_CP051643.1\|WP_037541676.1\|2179909_2180137_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP051643.1\|WP_037541678.1\|2176110_2177178_-\|acyltransferase-family-protein	unknown	unknown	gnl\|CDD\|226446
NZ_CP051643.1\|WP_037541683.1\|2160196_2161687_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224154
NZ_CP051643.1\|WP_037541677.1\|2177499_2179044_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|179543
NZ_CP051643.1\|WP_002444342.1\|2179144_2179696_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|274100
NZ_CP051643.1\|WP_002444345.1\|2174973_2175915_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566
NZ_CP051643.1\|WP_002444346.1\|2172414_2174922_+\|CDP-glycerol-glycerophosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|367953
NZ_CP051643.1\|WP_037541679.1\|2171690_2172251_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP051643.1\|WP_037541810.1\|2159708_2160197_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_002444339.1\|2182149_2182323_+\|FeoB-associated-Cys-rich-membrane-protein	unknown	unknown	gnl\|CDD\|378908
NZ_CP051643.1\|WP_002444354.1\|2169648_2169855_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP051643.1\|WP_044466420.1\|2163728_2165234_+\|phytoene-desaturase	unknown	unknown	gnl\|CDD\|274273
NZ_CP051643.1\|WP_037541681.1\|2165457_2166618_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181219
NZ_CP051643.1\|WP_044466419.1\|2161693_2162815_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|132997
NZ_CP051643.1\|WP_002444340.1\|2180142_2182137_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP051643.1\|WP_002444362.1\|2166695_2166902_-\|copper-chaperone-CopZ	unknown	unknown	gnl\|CDD\|225328

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_037541809.1\|2166991_2169379_-\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP051643.1\|WP_002444352.1\|2170032_2170428_-\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.22855e-06
NZ_CP051643.1\|WP_002444350.1\|2170732_2171602_+\|SDR-family-oxidoreductase	gnl\|CDD\|187613	cd05355, SDR_c1, classical (c) SDR, subgroup 1. These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	2.93392e-145
NZ_CP051643.1\|WP_002444370.1\|2162852_2163716_+\|phytoene/squalene-synthase-family-protein	gnl\|CDD\|224478	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism].	1.25073e-81
NZ_CP051643.1\|WP_037541676.1\|2179909_2180137_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	2.28642e-12
NZ_CP051643.1\|WP_037541683.1\|2160196_2161687_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224154	COG1233, COG1233, Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism].	8.9818e-109
NZ_CP051643.1\|WP_037541677.1\|2177499_2179044_+\|L-glutamate-gamma-semialdehyde-dehydrogenase	gnl\|CDD\|179543	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional.	0
NZ_CP051643.1\|WP_002444342.1\|2179144_2179696_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|274100	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator. The seed alignment for this family was built from a set of closely related uncharacterized proteins associated with operons for the type of bacterial dihydroxyacetone kinase that transfers PEP-derived phosphate from a phosphoprotein, as in phosphotransferase system transport, rather than from ATP. Members have a TetR transcriptional regulator domain (pfam00440) at the N-terminus and sequence homology throughout.	7.92127e-09
NZ_CP051643.1\|WP_044466419.1\|2161693_2162815_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	2.25146e-23
NZ_CP051643.1\|WP_002444346.1\|2172414_2174922_+\|CDP-glycerol-glycerophosphotransferase-family-protein	gnl\|CDD\|367953	pfam04464, Glyphos_transf, CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase. Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerization of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid.	2.49096e-83
NZ_CP051643.1\|WP_037541678.1\|2176110_2177178_-\|acyltransferase-family-protein	gnl\|CDD\|226446	COG3936, COG3936, Protein involved in polysaccharide intercellular adhesin (PIA) synthesis/biofilm formation [Carbohydrate transport and metabolism].	1.4438e-24
NZ_CP051643.1\|WP_002444339.1\|2182149_2182323_+\|FeoB-associated-Cys-rich-membrane-protein	gnl\|CDD\|378908	pfam12669, P12, Virus attachment protein p12 family. This family of proteins are related to Virus attachment protein p12 from the African swine fever virus. The family appears to contain an N-terminal signal peptide followed by a short cysteine rich region. The cysteine rich region is extremely variable and it is possible that only the N-terminal region is homologous.	0.00811693
NZ_CP051643.1\|WP_037541679.1\|2171690_2172251_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	7.57786e-97
NZ_CP051643.1\|WP_002444345.1\|2174973_2175915_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.42132e-115
NZ_CP051643.1\|WP_037541681.1\|2165457_2166618_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181219	PRK08068, PRK08068, transaminase; Reviewed.	5.1567e-142
NZ_CP051643.1\|WP_044466420.1\|2163728_2165234_+\|phytoene-desaturase	gnl\|CDD\|274273	TIGR02734, Phytoene_desaturase_lycopene-forming, phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	5.2836e-134
NZ_CP051643.1\|WP_002444340.1\|2180142_2182137_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP051643.1\|WP_002444362.1\|2166695_2166902_-\|copper-chaperone-CopZ	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.01831e-16

>NZ_CP051643.1|WP_002444352.1|2170032_2170428_-|DUF3139-domain-containing-protein
MQKKYIIITIIIIIFVGPGLIFNIGKYIYFNYQSHEEAKTKAKVHRLLKQKGWEDKIKTEKPNFTLNTRENNVEVTFKDEPYNTYQYDVNDDGKVTGDAELKMKYKERFDNDKKYREYRKRHRFEEKYDLK
>NZ_CP051643.1|WP_002444354.1|2169648_2169855_-|hypothetical-protein
MKTLLKGVISVLIILGIIKTFQDHDILNEAGHYYEQAKSGEIVQDFSNFNFNNFKDLDLENLKPSDFF
>NZ_CP051643.1|WP_037541809.1|2166991_2169379_-|copper-translocating-P-type-ATPase
MTHKTTTLDITGMTCAACSNRIEKKLNRLDDVSAQVNLTTEKATIEYDADQYDSKSFISEIQKLGYDVRTEKQELDITGMTCAACSNRIEKVLNKTEGIQHATVNLTTEQALVSYYPNAINTDRIIQRIQKLGYDAEPINNDDDQQTSRKEQELKAKRTKLIISAILSAPLLLMMFVHLLPLHLPAIVMNPWFQFILATPVQFIIGWQFYVGAYKNLRNGSANMDVLVAVGTSAAYFYSLYEMIQWLTHHVNEPHLYFETSAILITLILFGKYLEARAKSQTTNALGELLSLQAKEARILRNNQEVMVALDEVIEGDTLIIKPGEKIPVDGEVIKGSTSIDESMLTGESIPVEKVIGDTVIGSTLNKNGSVHVKATKVGRDTALSNIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIAIVTFIVWIVFVHTGQFEPALLAAISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHHIDTIVLDKTGTITNGKPKVTDYAGDLETLQLLASAEKASEHPLAEAIVTFAEDKGLSLLDNESFNARPGHGIEAMINETHVLIGNRKLMHDFDITIDADNEQKLAQYERQGQTAMMIAIEQELKGIIAVADTVKDTAKQAVSELQNMNIEVVMLTGDNKQTAQAIAQEVGIDRVIAEVLPEQKAEQVSLLQEEGRNVAMVGDGVNDAPALVKADIGIAIGTGTEVAIEAADITILGGDLLLLPKAIKASKATIRNIRQNLFWAFGYNVAGIPIAALGLLAPWIAGAAMALSSVSVVTNALRLKNMKL
>NZ_CP051643.1|WP_002444362.1|2166695_2166902_-|copper-chaperone-CopZ
MTKETIQVEGMSCEHCKDAVESSLAKLNGVHTAEVNLNEKHVRVVYDDSKVNVAQMKEAIEDQGYDAK
>NZ_CP051643.1|WP_037541681.1|2165457_2166618_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MVISDRLAAIPDSYFGKTMGRKVEHGPLPLINMAVGIPDGETPKGIVNHFSEALRIPENQKYGAFHGKESFKEAIVNFYQRQYGVTLHKDDEVCILYGTKNGLVALPTCIVNPGETVLLPDPGYTDYLAGVMLADAKPVPLELEPPDYLPDWNKIDPQTLKETKLIYLTYPNNPTGSTATQSVFDEAIEKFKDTDTKIVHDFAYSAFGFDAKNPSILASKDGKEVAIEIFSLSKGYNMSGFRVGFAVGNKEMIQALKKYQTHTNAGMFGALQDAATYALNHYDDFLKEQNETFRKRRDMFEAKLQEAKLPFVHSKGGIYSWLHTPPGYNSEEFEQYLLQEKSILVAPGIPFGENGNDYVRISLALDDEQLEEAAERLTQLANMYDV
>NZ_CP051643.1|WP_044466420.1|2163728_2165234_+|phytoene-desaturase
MNIAVIGAGVTGLAAAARLASQGNRVTIFEKNNRIGGRMSQFTKDGFTFDMGPSIVMIPEVYRAVFEECGKNFEDYVEMEQLPYIYDVYFGKNDKVRVPTDLAELQETLESIEPGTTHGFMSFLTDVYQRYEIARYHFLEKTYRKASDFYNLESIIQGLKLKTLNNADNLIENYIDNERIQKLLAFQMLYIGIDPKRGPSLYSIIPMVEMMFGVHFIKGGMYGMTQGLVQLNKDLGVEIQLNAQIDEIIIDPKYKQADGVRVNGLVQRFDKVLCTADFPYAAEKLMPSHSRVKKYKPSKIERLDYSCSAFMMYIGIDKDITDEVMLHNVVFSKRFRQNNDEIFGGRISEDPSIYVYVPAVGDSSLAPKGKTGLYILMPTPELKTGQINWKDESIIEQVKDIIYHQLETIDALEDVRSHVISETVFTPIDFEKEYNAKFGTAFGLMPTLAQSNYYRPPNVSRDYKDLYFAGASTHPGAGVPIVLTSAKITVNEMLKDIENGV
>NZ_CP051643.1|WP_002444370.1|2162852_2163716_+|phytoene/squalene-synthase-family-protein
MTTNEENFKYCHQIMKEHSKSFSYAFDFLPEQERQAVWVIYAVCRIIDDSIDVHENPQILKDIHEDISYIENTSDISHHEFKSNQSIMVALYVVSQHYTIEYQSFYNLIQSVYEDQNFEMFETDEALLNYCYGVAGTVGEVLTPVLAQSPNKETYATARKLGEALQITNILRDVGEDFENGRIYFSESSLARFDVSIENEFNHRISNQYIDLWEYFAAIAEDDYEIALSNIDTFNKEAQPIIELAAVIYRAILDEVRKASYTLHRRVYVSKLNKAKLYRKIKNKYQL
>NZ_CP051643.1|WP_044466419.1|2161693_2162815_+|glycosyltransferase-family-2-protein
MKMIQFILTILSTISLICGRLIFNQRHRLLSSQSPIIHSNEVTIIIPARNEERRLPHLLQSLQGQQGIYEVIVMDDGSKDNTKEIAQTFGATVYETEQNFDRQWFGKSHACYQGATNAQSELLMFVDADVTFGHPHAIEKILNTYRKQHNHGLLSVQPFHETGKFYESLSAIFNLMTVVGVNQFSSLARQSNNDIAFGPITLMHRDDYFKTDGHKNAQHSIIEGFALGEKFESVQLPVTVYEGGNDVKFRMYEDGIQSLIQGWTKHFSVGANKTQPQIMLAIVMWLMGSITSTLTLLISVFTKPASRIVSYLFYVLYTCQFVRLHRRVGAFSMVLLILHPVLFIFFIFIFANSWRHTHFSKKVEWKGRSFKIN
>NZ_CP051643.1|WP_037541683.1|2160196_2161687_+|NAD(P)/FAD-dependent-oxidoreductase
MTKSVIVIGGGLGGIAAAIRMAQSGFNVKLFEQNNHIGGKVNRLDESGFGFDLGPSILTMPYIFEKLFNYSDKKMSDYVEIERLPLQWRNFFSNGETIDLYENNEATVLNNVQLNEKDKAELDRYFKYTERIYRFTEKGYFNHGLDTLPEILKYHGPLKALHGFDYFSTMQQAIHRYISNPRLREILGYFIKYVGSSSYDAPAVLSMLFHMQQEQGLWYVKGGIHHLAQALEQLAIEEGVELHTGTSVNNIKTYHHNVTGVRLANGDIVEADYIISNMEVIPTYKYLLHFSQQKIDQLEKTYEPASSGYVMHLGVNRSYPQLAHHNFFFSNDSKRNYDEVFHQKVLPQDPTIYLVNSNKTDLQQAPDEFENIKVLPHIPYIQDKPFKKEDYEAFKTRVLTKLEKMGLTDLRKHMIYEDMWTPEDIRQHYHSHRGAIYGVVADKKKNKGFKFPKHSKYFDNLFFVGGSVNPGGGMPMVTLSGLQVADKINAIEAQKE
>NZ_CP051643.1|WP_037541810.1|2159708_2160197_+|hypothetical-protein
MKNIKKLAQLVILHSVFWFSVQMSIAQLGTRIPLRFFDKNAHFFRPFQWEKGGQIWGDTLQISKWKKLIPEGTKLNSAIYDKSDLTNNIEETRHLLLEMRRAELVHWLSMVPLIVFIKTSKYIKYINLLYVVFSHVPIIIVQRYNRPRIERFIRLVEKRGKK
>NZ_CP051643.1|WP_002444350.1|2170732_2171602_+|SDR-family-oxidoreductase
MSLLDFHKEIKGYTQDRQPGIEADMNPKPIAELDEYKAAGKLQGKVALITGGDSGIGRSVAILYAKEGANVAIGYYDEHQDAEDTVRRLEELGVKAKAYAHDLKDEKQSKQLIDNVVKDFGGLNILVNNGGVQFPRDNFEDITPDQVKETFMTNIFGMMFLSQAAVPHLSEGDAIINTTSVTAYRGSGHLIDYSATKGAIVSFTRSLATTLMEKSIRVNAVAPGPIYTPLIPSTFDEEKVENQGGGTPMGRRGQPAELAPSYVFLATHADSSYITGQVIHVNGGDYITT
>NZ_CP051643.1|WP_037541679.1|2171690_2172251_+|sugar-O-acetyltransferase
MTEKEKMLAHQWYDANFDDELKKDRLKAKELCFDLNHTRPSDEEKRDRIMNELFGYQTENVGISIPFDTDYGWNVKFGKNVFINTNCYLMDGGGITFGDNVFIGPNCGFYTATHPLNYKERNKGLELAEPIVVGSNTWFGGHVSVMPGVTIGDGSVIGAGSVVTKDIPPNSLAVGNPCKVIKSIEQ
>NZ_CP051643.1|WP_002444346.1|2172414_2174922_+|CDP-glycerol-glycerophosphotransferase-family-protein
MKNFKNFIANQSRRKINFITSPINMMNKSNYNHQVMTYAKYYGDLKVKDHQILYQVRNGKNITGNPYAIFLYLVNHKEYRRFLHKWVVDSKETLNFYKNKFKNYNNVDFVIIDSSDYLKSLAESKYLINDSTFPLYFAKKENQIYINTWHGTPLKYMGLDMDNNVQGSQNIIKNFLSSDYIISSNRHTTNIFKSAFNLHHIYNGEILEKGYPRIDLTLKNQKSQILNTLKGLISENEEKILLYCPTWRGEDLNNPDINIESILNEAKELEAHLNYKVLVKVHPFIYEEAKKDCDLKNYLIPDYVDTNELLAIVDLMVTDYSSIFFDYLVTNKPIIFYTPDYDDYKFCRGMYINPNELPGPVCTHINDVISSINNKSYENHQIKNNYEKFKTTYVSLEDGHASKNIVEHIFNRKAESPKRNTTRKKTILIYPGGMKNNGITTSIINLLENIDYHQYDITIFLNYSKKEEMLSNLDRVNPNVRIIFRRGPLLASLKECYKVDFVKQRGLQSFLEKLLYPKKVYQREFRKIFGDSHFDYAIDFSGYSMFWANLILASNAKRKLVYLHSDIKADMERRINGVRPHYQNLKGLVSLYPYFDKLVSVSEATSLLNKEKINNPLLSDKYCSSRNTINLNKIHTLVEDDSDRFEKNGESVLINIKNGNVQTVEFSNNDFKIVSIGRLSPEKGFDLLINAVAKLVPKYPNIKLYIMGEGPLKKSLQSLIKKLKMRNHVFLLGHRKNPFYVMKQSNLFALTSHYEGQSMVLLEALTLGVNVLASDIVANRYVLKDGKYGTLVINEIEEIAKGIETFILGQNEKYEKFDAEAYNAKAIKEFYDLLQ
>NZ_CP051643.1|WP_002444345.1|2174973_2175915_-|NAD-dependent-epimerase/dehydratase-family-protein
MKALITGGAGFIGSHISERLTNEGVEVHVIDNLSTGRLENIHFIPKEHFYLKDITDVTFVSELIKKEQFDYIFHLAAMVSVVETIEKPVISNETNINATINLLEATRKWDSQIKKFIFASSAAVYGDLPDLPKSTINSKVAPLSPYAIQKFSGEQYAHIYHHLYNVPTVCLRFFNVYGPKQNPNSDYSGVLSILNAKFINKEQFTFYGDGEQTRDFVYIDDLVSAIWTVLYSKDTNGGIFNVGAGSETSLNTVFKSFEKVFGYTIPHIYKECRIGDIKHSYADITPLKRLGYSPQFNIHSGINAYVSYSKNSH
>NZ_CP051643.1|WP_037541678.1|2176110_2177178_-|acyltransferase-family-protein
MKTYTSVIFWMRSIACLSIVIIHSITTTFSKMHDVPHSTSLRLFQLLLMFSTPMFVFISEFLLAKNYGSKIKKGFFKNKLIYLGIPYVIINLSISYFYFRPKNLHEYLFHVGDTMFHGGAVTYFIVIIFQFYLLHWLFSKYLIGLNPIKMIVISILITTMYWAMRTFISPPNNPILAAIWDREGWMIFIGWLSYFLLGFYIGTYYEAFMNKIKDYTWHIIIGAFLSIIFMFLNYILGISTWVESKRVDTPIYVTMVILLFFLFSSYIKYVPKFIVFISNYSYCIYLIHYFFVHDLGLLSRNPIKNVLFNTIVTLTLAITVGYLFNLFKFGKYIVGGIGKIKYENIYESYQNNNMD
>NZ_CP051643.1|WP_037541677.1|2177499_2179044_+|L-glutamate-gamma-semialdehyde-dehydrogenase
MVVPFKNEPGIDFSVQDNVDRFNEELKKVKGQLGQDIPLVINGEKIDKSDKFESLNPADTSQLVAKVSKATKDDVENAFKAANEAYQSWKKWSHKDRAELLLRVAAIIRRRKEEISAVMVYEAGKPWDEAVGDAAEGIDFIEYYARSMMDLADGKPVLDREGEHNKYFYKPIGTGVTIPPWNFPFAIMAGTTLAPVVAGNTVLLKPAEDTVLTAYKLIEILEEAGLPKGVVNFVPGDPKDIGDYLVDHKDTHFVTFTGSRATGTRIYERSSVVQEGQHFLKRVIAEMGGKDAIVVDENIDTDLAAEAIVTSAFGFSGQKCSACSRAIVHKDVHDEVLKKAVQLTKELTLGNTENNTFMGPVINQKQFDKIKNYIEIGKDEGQLEQGGGTDDSTGYFIEPTIFSGLKSSDRIMQEEIFGPVVGFIKVDNFDEAIDVANDTEYGLTGAVITNNREHWIKAVNEYDVGNLYLNRGCTAAVVGYHPFGGFKMSGTDAKTGSPDYLLNFLEQKVVSEMF
>NZ_CP051643.1|WP_002444342.1|2179144_2179696_-|TetR/AcrR-family-transcriptional-regulator
MNENDLRVIKTKKALSTSLYELLEKRSFEVISVNQICNHAMVHRTTFYKHFYDKYDLLVYLFKLLTKDYFSTDLKERLNNPFQTIEATFTNKEELERIEKVQKDDVSFAKIFREFCVDIMKADIKENIHRISVDTAIPENLVFYIYGSTLDGFMEWIKQEDIDWPASEIDAVFHKAINLSISE
>NZ_CP051643.1|WP_037541676.1|2179909_2180137_+|ferrous-iron-transport-protein-A
MLNVKNGLKDKKYRIKHIGITNKKMLYRLGAMGVTKGSEISIKQQCLLNGPSIVEINGQYLSIRQSDARLIALED
>NZ_CP051643.1|WP_002444340.1|2180142_2182137_+|ferrous-iron-transport-protein-B
MSETFCILGNPNVGKTSLFNALTGSYEYVGNWSGVTVEKKIGKLKGSLGSLIDLPGIYDLSPISKDETVVTDYLLTTNFTGAINIIDASQLKRNMQLTIQLMELNVPLIIGLNMVDVATQRGIKIQFDQLMKRLKIPMFPIVARKSKGTNDILHELEFLKPDDRQVFKIDYGKEIEDAIERMSLIIKTNSNFPKERIRFIAIQYLLDNVQISQKLSDAILEQIAPIKQELNHQSDLYAREQIEKIRNNYINEILEGAVEYPEEEKQFLTATIDKLLINKYLGIPIFLGIMWLIFQTTFTWIGTPLSDQMDSFIGGPFTDWVKLLMNDLHVLPFLQDLITDGIIAGVGSVLVFVPQIVVLFFFISLLEDSGYMARIAVLMDRTMETIGLSGKSFIPMIIGFGCNVPSIMAARSIENEKERLITILIAPFMSCSARLPVYALFVGVFFKAYQSLVVLSLYLLGILVALIVSTILNRCILKNSDSIFIVELPTYRVPSFKTLWRSTWEKAKGFVRKAGTFIFGGSVVIWALTYIGPHGVNVKINQSFIHILGEAVSPIIAPLGFGTWQAGATLIPGFLAKEVIISSMAILYSSSEDGLVHVIQQQFTPLSAYAFMIFILLYVPCISTVATIRKETCSWKWTLFALIYPIITAYGLTLAFYQISKLFI
>NZ_CP051643.1|WP_002444339.1|2182149_2182323_+|FeoB-associated-Cys-rich-membrane-protein
MYIAINIIICLAIFGYTIMSLYKFFKRSKSGQCGGCKTGCQCDHPASDKVNPTHSKI

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Crispr_ID: NZ_CP051643_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP051643_7

2339312-2339394

Orphan

Consensus_repeat	Method
AAACTTTAGTTTTTAGATTCGCTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP051643_7

>merge|NZ_CP051643|7|2339312-2339394|CRISPRCasFinder
AAACTTTAGTTTTTAGATTCGCTTATGCATTTGTCCAAAGACAAATGTAAACATATGGAAACTTTAGTTTTTAGATTTGCTTA

>NZ_CP051643|7|7|2339312-2339394|CRISPRCasFinder
AAACTTTAGTTTTTAGATTCGCTTA	TGCATTTGTCCAAAGACAAATGTAAACATATGG
AAACTTTAGTTTTTAGATTTGCTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP051643.1\|WP_002444021.1\|2340738_2341089_-\|DUF4889-domain-containing-protein	unknown	unknown	gnl\|CDD\|374445
NZ_CP051643.1\|WP_002444035.1\|2333096_2333753_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP051643.1\|WP_080981441.1\|2348764_2349544_+\|glucose-1-dehydrogenase	unknown	unknown	gnl\|CDD\|187610
NZ_CP051643.1\|WP_044466790.1\|2336092_2336539_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP051643.1\|WP_037541634.1\|2332042_2333077_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP051643.1\|WP_002444006.1\|2349730_2350150_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP051643.1\|WP_002444025.1\|2337453_2337819_+\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_CP051643.1\|WP_037541631.1\|2341267_2341690_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|226389
NZ_CP051643.1\|WP_002444041.1\|2330883_2331561_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_CP051643.1\|WP_152333551.1\|2339470_2340612_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP051643.1\|WP_044466791.1\|2341760_2343866_-\|AraC-family-transcriptional-regulator-Rsp	unknown	unknown	gnl\|CDD\|197666
NZ_CP051643.1\|WP_002444031.1\|2335386_2335803_-\|Hsp20-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP051643.1\|WP_002444010.1\|2347296_2348574_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224428
NZ_CP051643.1\|WP_002444012.1\|2346522_2347134_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|274100
NZ_CP051643.1\|WP_002444023.1\|2337998_2339279_+\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|183075
NZ_CP051643.1\|WP_002444014.1\|2345505_2346453_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_CP051643.1\|WP_002444027.1\|2336703_2337333_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_CP051643.1\|WP_002444015.1\|2344884_2345262_-\|DUF1722-domain-containing-protein	unknown	unknown	gnl\|CDD\|377982
NZ_CP051643.1\|WP_037541636.1\|2331580_2332033_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|379056
NZ_CP051643.1\|WP_044466789.1\|2334107_2335283_+\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133

Protein	Function_ID	Function_description	E-value
NZ_CP051643.1\|WP_002444021.1\|2340738_2341089_-\|DUF4889-domain-containing-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	7.06458e-26
NZ_CP051643.1\|WP_002444035.1\|2333096_2333753_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.31816e-76
NZ_CP051643.1\|WP_080981441.1\|2348764_2349544_+\|glucose-1-dehydrogenase	gnl\|CDD\|187610	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs. NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser).	1.63173e-100
NZ_CP051643.1\|WP_044466790.1\|2336092_2336539_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.37309e-18
NZ_CP051643.1\|WP_037541634.1\|2332042_2333077_+\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.20968e-58
NZ_CP051643.1\|WP_002444006.1\|2349730_2350150_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.08367e-20
NZ_CP051643.1\|WP_002444025.1\|2337453_2337819_+\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	4.55826e-10
NZ_CP051643.1\|WP_037541631.1\|2341267_2341690_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	2.20238e-43
NZ_CP051643.1\|WP_002444041.1\|2330883_2331561_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	1.86256e-108
NZ_CP051643.1\|WP_152333551.1\|2339470_2340612_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.74934e-46
NZ_CP051643.1\|WP_044466791.1\|2341760_2343866_-\|AraC-family-transcriptional-regulator-Rsp	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	2.30538e-20
NZ_CP051643.1\|WP_002444031.1\|2335386_2335803_-\|Hsp20-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	9.88001e-26
NZ_CP051643.1\|WP_002444010.1\|2347296_2348574_+\|ABC-transporter-permease	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	1.91569e-38
NZ_CP051643.1\|WP_002444012.1\|2346522_2347134_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	gnl\|CDD\|274100	TIGR02366, conserved_hypothetical_protein, probable dihydroxyacetone kinase regulator. The seed alignment for this family was built from a set of closely related uncharacterized proteins associated with operons for the type of bacterial dihydroxyacetone kinase that transfers PEP-derived phosphate from a phosphoprotein, as in phosphotransferase system transport, rather than from ATP. Members have a TetR transcriptional regulator domain (pfam00440) at the N-terminus and sequence homology throughout.	5.52427e-10
NZ_CP051643.1\|WP_002444023.1\|2337998_2339279_+\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	5.78744e-165
NZ_CP051643.1\|WP_002444014.1\|2345505_2346453_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	3.93329e-108
NZ_CP051643.1\|WP_002444027.1\|2336703_2337333_+\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	9.5178e-59
NZ_CP051643.1\|WP_002444015.1\|2344884_2345262_-\|DUF1722-domain-containing-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	5.07591e-19
NZ_CP051643.1\|WP_037541636.1\|2331580_2332033_+\|GAF-domain-containing-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	9.59453e-07
NZ_CP051643.1\|WP_044466789.1\|2334107_2335283_+\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	2.89092e-110

>NZ_CP051643.1|WP_002444023.1|2337998_2339279_+|cation:dicarboxylase-symporter-family-transporter
MALFKRKISLPTQVIIALVLGVIAGLLLFGQDNVANYIKPFGDIFLNLIKMIIIPIVFCALALSISNLGDSKKVGSYGWKAILYFEIITTVAIGLGIIIGNLFKPGSGLDPDKLPKGDISKYQSSAQSAEQATTYGNHLIDTIVNIVPTNLFESLAKGDLLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLLKLLVVVVFAMIFFVVVVLGIVARMVGVSIFSIMKILKSELLLAFSTSSSEAVLPVIMKKMEKFGAPKDVTSFVIPIGYSFNLDGSALYQSIAALFVAQMFDIHLSLTQQIVLMATLMIASKGMAGVPGVSIVVLLTTLGSMHLPAQGLALIIGIDRLLDMVRTCVNVMGNALSTIVISKWENVYDKEKGQEYLKTL
>NZ_CP051643.1|WP_002444025.1|2337453_2337819_+|DUF3139-domain-containing-protein
MSRKQVIFRIIIILIISLILAVVFFFGLKTYQGHKNIELMDSYIKEHHLQDKIKKQETLYSAKKGMYYKQIVYKDEPNVTYVLQPISTNKGIFSEGFDSETKKSIKKAKHSDFDKNYKPSK
>NZ_CP051643.1|WP_002444027.1|2336703_2337333_+|nitroreductase-family-protein
MSRINDFNEILNERKSVKVFDSDYKIPHEEMDEIIIKATKAPSSVNMQPWRIVVVDSDEGKAKLKDAFGFNSRQLTTSSAMIIIFGDLQNYEKAEQIYSDAVDQQHMTEEIKTQMLEWILPYYKGLSKEGMKDIVNIDSSLMAMQFMLTAKAYGYDTNPIGGFDKENIAEIIGYDSERYIPVLAIAIGKKAQEAHSSVRLPVHEIREYL
>NZ_CP051643.1|WP_044466790.1|2336092_2336539_-|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYTNYLKEYELTYTGHIVLMAIEDDEKLNIKKLGERVFLDSGTLTPLLKKLEKKNYVVRSREEKDERNLQISLTERGKEIKKTLSDISMKVYSEFNINQDEAKELIANLQNFVSKNFDKNLEK
>NZ_CP051643.1|WP_002444031.1|2335386_2335803_-|Hsp20-family-protein
MNSNEFFNNNFFKNDPSELFKDIGKQVYNQFSSSAFPTNIYDTDEAYIVEAELPGVSKEDISLKFEQNILLIKANKKLKNENQKIQLNERSTGELERHFKFDDINKEAITANHAEGVLYVTLPKVIDEDEKATTIAIQ
>NZ_CP051643.1|WP_044466789.1|2334107_2335283_+|NarK/NasA-family-nitrate-transporter
MKKGVYQLTLQTLSLIVGFMAWSIISPLMPFITQDIQISASQVSVILAIPVILGSVLRVPFGYLTNIIGAKWVFFSSFIILLFPIFFLGQAQSTTMLMVCGFFLGVGGAIFSVGVTALPKYFSKDKVGLANGIYGMGNIGTAISSFCAPVLAGLIGWQSTVRSYLIIIGLFAVLMFLLGDNKETKVKVPLMSQMKVLSKNYKLYYLSLWYFITFGAFVAFGLFLPNYLVHHFEIDKVDAGIRSGVFIALATFLRPLGGVLGDKFNAVKMLIIDFMFLIIGGMILSLFDGMIHFTIGCLAISICAGIGNGLVFKLVPSYFSKEAGSANGIVSMMGGLGGFFPPLVITFVTGLTGSSHLAFGLLVLFALIALMTMIHLYKKENVSNISTIYDK
>NZ_CP051643.1|WP_002444035.1|2333096_2333753_+|response-regulator-transcription-factor
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEYRPDVLILDLSMPPGESGLVATSKISESFPETKILILTMYDDEEYLFHVLKSGAKGYILKNAPDEQLILAVRTVYRGETYIDMKLTTSLVNEFINQSNQEEVNYSSDPFKVLSKRELEILPLIAKGYGNKEIAEKLFVSVKTVEAHKTHIMNKLNLKSKPELVEYALKKKLLEF
>NZ_CP051643.1|WP_037541634.1|2332042_2333077_+|sensor-histidine-kinase
MQSKLEGSIEALLHKYYDATTEKIVFVNHLGKIIAMNDAASDILSEEDNYNAMTHAICNRCEGYSNEYDIQSCENCFLEENQLQKSNFQVFMKTKDNKVEPFTATYQTIDSDRGISAFTLQNVSPQIERQEKMYQQKMLHKSIQAQENERKRISRELHDSVIQEMLNIDVELRLLKYKYQDENLVDSAQHIEGLVSQLIDDIRNLSVELRPSSLDDLGIEAAFNSYFKQFEENYGIQINYQSNIKGMRFDNEVETVVYRVIQEAVLNSLKYAEVNEIEVNINKSDNRLLAEVVDRGKGFNIEDKPKGSGLGFYGMKERAELVNGNINIESHINKGTIVTLDIPI
>NZ_CP051643.1|WP_037541636.1|2331580_2332033_+|GAF-domain-containing-protein
MKPESLLHNKSLQDNLDRLRKNEGYDFGAIAMYEHYHRSSPIKWKYVSGNTNERYKLIILRKGRGLAGTVMKTGKRMVIADVDMALTQAEKIKFPIILNEALTAVVAVPLWLDEQMYGVLLLGQRNHQPLPQTLEQLDIQSQIGFFTEMN
>NZ_CP051643.1|WP_002444041.1|2330883_2331561_+|respiratory-nitrate-reductase-subunit-gamma
MLNQFIWIIYPYLCLTIFIIGHLARYKYDQFSWTAKSSELIEKKQLKWGSLLFHLGVIPVFFGHVVGLLVPANWLEAVGVNNHIYHIGAVYIGSIFGIITLLGMMLLTLRRLTIKNVRRLSSFSDIFVNILLCIILIMGCYSTIFTNAVQPDFDYRQTIAIWFRHLFMFSPNADLMLNVPLSFKVHILLGFTIFALWPFTRLVHVWSVPLSYMNRRYIIYRKNKV
>NZ_CP051643.1|WP_152333551.1|2339470_2340612_-|IS3-family-transposase
MKRVSYSVEIKYKAVEMKAAGFSTKEIMKELNIRNRTQVKTWWRWYRNGESYRFSQQVGKQYTYGKGLEELSEVEQLKLENKRKDIELDIFKKVQGIGKEVVPTVVIDLVDQLKVKYSIKLILEVLNIPKSTYYRWKNKTHKNDTVTQKVIELCKANHYTYGYRKITALINQCYTSPINHKRVQRMMQKHHLNCRVRPKKTTKIGKPYYKTDNLLQRQFKASCPMEVLTTDITYLPFGHSMLYLSSIMDIYNGEIVAYKIDDKQDQSLVNDTLNQIDIPEGCILHSDQGSVYTSYAYYQLCEEKGIIRSMSRKGTPADNAPIESFHSSLKSETFYINNELNRSNHIVIDIVEKYIKNYNNNRIQQKLGYLSPVKYRELIA
>NZ_CP051643.1|WP_002444021.1|2340738_2341089_-|DUF4889-domain-containing-protein
MKNKKALGFGLIAIMLIVCIVLVIMMMTGGKKDTYYGIMKNSTTIDKMISEKDEKIEKNVKLPSNANVSVKKEDFVMIFKDEKSGKITKVKKVDHDDVPHGLMSKIHDMKGMHHGM
>NZ_CP051643.1|WP_037541631.1|2341267_2341690_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MDKQQATQAIEKVLDNSKVGVLSTAYNNKPNSRYMVFYNDDLTLYTKTNINSVKVEEIEDNPYAYILLGYNETTNNSFVEIDAQIEVVKDQKVIDWLWETQDKTFFDSKQDPELCVLKVQPKSIKLMNDDDLDTPITIEV
>NZ_CP051643.1|WP_044466791.1|2341760_2343866_-|AraC-family-transcriptional-regulator-Rsp
MTCLLNIYKHHHSPPTRNINRIILMFSLTNDLKITINGETKDLDNHIAIINQTDIYYVNQSSNLVTLSIPVFYFYNEDNQFFKCYFDRHLLQSSGFVKNIILQSIHRFMNNEEQDNQAISKIIQTLYKESVIRYKGKYIPKVAINHPIFVEGLTYIHTKVSEMLSLRQVAQHCNISESYCSNLFVRYLNMNFKDYFTSLKVIHAIKLLLSTDDSINAISEHSGFSSHTNFTNQFKNYLGFSPKQFRSYISKIELNPTIQFINENYSEFKDLINQFEFNDQLATEITEKDIDQFNPKDRTKSSKAFIRFENFNELFQFVFNEYYDIDFSYLPQPVVFIQDISDIVVSHINFNLLNRCFEKLFEKDIGLAMKIKTTQQFEAINQVILSFLQSNQDYKTNKKLVKLMLVFDSESMSVNEIHLCHLKIKNKNREIRYGMTVEGLLRESASIDHTYDIMKRLNFDYYFIDIENLETKNLLLNKRKTYHHSSTHFENYKQFMLDSGISSTRFVYNNLSLKCFKYTNNGANPLQLSDLVCHLIALMRYGGGISYQLIDDDSQYISLFNSYGSPLPLMHIYKMVASFVDEPLEVGNNYLMSRKGGNYHFLLFNKINDRYLSDSKQKFIFKNQLNVNSLIIINTLNNEHGSIQNLLPKSKELLYIERSILEELDKCNHPKTELAVQEENHKPFQLTLKHDEVKYICIKPL
>NZ_CP051643.1|WP_002444015.1|2344884_2345262_-|DUF1722-domain-containing-protein
MKERGKIEKLWSEEKYHVLLHHQHAYDNIRDMLKGDPSLKEVQNEIANALAITPTKGSIINAYDHMWGYFKKVATDEEQHKALLLKNKFNDNQLNQLTLLNYLKELSDKYEVRYLQNSTVLKQLK
>NZ_CP051643.1|WP_002444014.1|2345505_2346453_-|magnesium-transporter-CorA-family-protein
MITAYKHASSNSNEIIETTVDHSASWINVVEPEREEIENLMEFYNIPEDFIRDPLDSEESARIEYDEDTGYSLIIIDLPIVNSTNRRVLSFVTIPLGIIIGNGMIMTVCDAENEFLENFARQDDIHLNFHSRFALEILLTIANHYNRNLRLLNKSRIRIEKDLKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLVIENNQAIETTELHQRILESITTSYASLLSNDMNTIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDAHSYASWVIVVGISLILVAIVSIFLWRKQKL
>NZ_CP051643.1|WP_002444012.1|2346522_2347134_-|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein
MKEDRRIRKTKSSIKKAFTTLLQNKDLDKITIRDITSEADVNRGTFYLHYEDKYMLLTDMEDECISELSHLTHFNHINGETVEEISQLFIENVLTKILQHIDDNLEFYHTILQLERTSKLEEKISELMKENMSRYMSINHEIDGIPEMYFHSYVAGATINTIKYWVLDPHRISVEELTHHIYKIVFNGPLRIMAEYKYQKNNA
>NZ_CP051643.1|WP_002444010.1|2347296_2348574_+|ABC-transporter-permease
MNIFKSKLLWFAPIAAIVILVIFSLAFYPAFNPKPKDLPIAIVNNDEGTTIQSNKVDIGKKIEDKLLDSDSDKIKWVKVDKESDLQKGFDNEKYYGAVVFEKDFSKNAMSKTQKVVMDSKKSEMKEKVESGEIPAQQAQKMKQKMGNQSVDVKQANLKTIVSQGSNLQASNIVTNVLSGIGENLNKQITKQSLSTLQKQNVDVSPKDIQGITNPVKVDNQKVNKVKDHQGGGNAPFLMFMPVWMGSMITSVLLFFAFRTSNNFAIQHRIIASVGQMVTTVIAAFLGSFAYIYFMKGVLGFHFDHPNRVALFIALAIMGFVGLILGIMVWLGMKSLPIFILLMFFSMQMVTLPKQMLPGGYQKWAYGWNPFTHYTTSLKELIYMNKAIELNGTMWMFIGFMIFGIVSSLVAAIVRKHSTKRTEVPS
>NZ_CP051643.1|WP_080981441.1|2348764_2349544_+|glucose-1-dehydrogenase
MSVLDQFKLDDKVAIVTGGASGLGKAMGKALAEAGANLVIADMNLEVGQETAKEFEEATDNKAIACEVDVTNLEQVNAMVKETMDTFGHIDILFNNAGINEHVKFEDMPYDRWKKTMDVNLNSMVLVTNAVGEVFRKQQHGVIVNTSSMSGVIVNSPQPQAAYNTSKAAVIMLTKSLANEWAEHNIRVNTIAPGYMKTELTKDYFAKGGDMIDTWMNMTPMKRPGVPEELQGAALYLASDASSFVTGSVITVDGGYTAL
>NZ_CP051643.1|WP_002444006.1|2349730_2350150_+|MarR-family-transcriptional-regulator
MNLTFQYLIRSLAHQMKNYADKRLDDFGITQEQSHTLGYIYRHQEEGMTQKTLLEAFDRKGSTVSSTLKILESKGLIYRKVNPKDTRSKLLKLTDEGITLVESFIKIFDEIEENMLKDFTDNDKEKLREYFDRMMNNLK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP051643_3	3.1\|842489\|26\|NZ_CP051643\|CRISPRCasFinder,CRT	842489-842514	26	NZ_CP051643.1	842719-842744	0	1.0
NZ_CP051643_3	3.3\|842604\|26\|NZ_CP051643\|CRISPRCasFinder,CRT	842604-842629	26	NZ_CP051643.1	842719-842744	0	1.0

1. spacer 3.1|842489|26|NZ_CP051643|CRISPRCasFinder,CRT matches to position: 842719-842744, mismatch: 0, identity: 1.0

tgagctttagctcaggcgttcctttt	CRISPR spacer
tgagctttagctcaggcgttcctttt	Protospacer
**************************

2. spacer 3.3|842604|26|NZ_CP051643|CRISPRCasFinder,CRT matches to position: 842719-842744, mismatch: 0, identity: 1.0

tgagctttagctcaggcgttcctttt	CRISPR spacer
tgagctttagctcaggcgttcctttt	Protospacer
**************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP051643_7	7.1\|2339337\|33\|NZ_CP051643\|CRISPRCasFinder	2339337-2339369	33	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	110127-110159	7	0.788
NZ_CP051643_2	2.1\|775730\|30\|NZ_CP051643\|CRISPRCasFinder	775730-775759	30	MT822287	Erwinia phage pEp_SNUABM_11, complete genome	472-501	8	0.733

1. spacer 7.1|2339337|33|NZ_CP051643|CRISPRCasFinder matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.788

tgcatttgtccaaagacaaatgtaaacatatgg-	CRISPR spacer
tatttttgtccaaagataaatgtaatca-atgct	Protospacer
*.. ************.******** ** ***

2. spacer 2.1|775730|30|NZ_CP051643|CRISPRCasFinder matches to MT822287 (Erwinia phage pEp_SNUABM_11, complete genome) position: , mismatch: 8, identity: 0.733

cttttggtaatacttgaatctacgcttcat	CRISPR spacer
cgtccattaatacttgaatctccgcttcgg	Protospacer
* *... ************** ******.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

95884 : 109104

uncultured_Caudovirales_phage(77.78%)

terminase,integrase

attL 97841:97858|attR 114885:114902

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044466866.1\|95884_96169_+	co-chaperone GroES	A0A221S4A5	uncultured_virus	8.9e-13	36.2
WP_002445341.1\|96238_97858_+	chaperonin GroEL	A0A240F779	uncultured_virus	7.6e-157	54.4
97841:97858	attL	NA	NA	NA	NA
WP_049402091.1\|97972_99148_-\|integrase	site-specific integrase	A0A2H4JBC4	uncultured_Caudovirales_phage	1.9e-213	95.4
WP_049402092.1\|99163_99835_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_049402093.1\|99987_100203_+	helix-turn-helix transcriptional regulator	A0A2H4JB11	uncultured_Caudovirales_phage	2.9e-08	56.4
WP_049402094.1\|100206_100521_+	helix-turn-helix domain-containing protein	A0A2H4JHK0	uncultured_Caudovirales_phage	3.8e-49	96.2
WP_002476297.1\|100533_100734_+	hypothetical protein	A0A2H4JD47	uncultured_Caudovirales_phage	1.9e-30	100.0
WP_049402095.1\|100737_101142_+	hypothetical protein	A0A2H4JBF1	uncultured_Caudovirales_phage	2.9e-65	95.5
WP_002467971.1\|101146_101353_+	hypothetical protein	A0A2H4JHP9	uncultured_Caudovirales_phage	4.9e-29	98.5
WP_049402096.1\|101365_101701_+	hypothetical protein	A0A2H4JBC6	uncultured_Caudovirales_phage	2.7e-32	94.9
WP_049402097.1\|101745_102648_+	primase C-terminal domain-containing protein	A0A1W6JQL5	Staphylococcus_phage	1.9e-64	43.2
WP_049402098.1\|102660_104373_+	DUF927 domain-containing protein	Q4ZE73	Staphylococcus_phage	2.1e-290	87.7
WP_049402099.1\|104683_105205_+	hypothetical protein	NA	NA	NA	NA
WP_145376024.1\|105265_105850_+	hypothetical protein	NA	NA	NA	NA
WP_002476284.1\|106217_106550_+	hypothetical protein	A0A2H4JHK4	uncultured_Caudovirales_phage	4.2e-54	99.1
WP_049401971.1\|106631_107219_+	pathogenicity island protein	A0A2H4JBG0	uncultured_Caudovirales_phage	4.5e-75	76.5
WP_145376021.1\|107218_107431_+	hypothetical protein	A0A2H4JHW4	uncultured_Caudovirales_phage	1.7e-13	60.9
WP_145376019.1\|107482_107920_+	pathogenicity island protein	A0A2H4JBD6	uncultured_Caudovirales_phage	1.0e-71	96.6
WP_049401931.1\|107916_108255_+	transcriptional regulator	A0A2H4JEH8	uncultured_Caudovirales_phage	6.4e-50	92.0
WP_044466850.1\|108256_108829_+\|terminase	terminase small subunit	A0A2H4JBF3	uncultured_Caudovirales_phage	2.6e-96	91.6
WP_044466893.1\|108834_109104_+	hypothetical protein	A0A2H4JBE4	uncultured_Caudovirales_phage	1.6e-40	92.1
114885:114902	attR	NA	NA	NA	NA

DBSCAN-SWA_2

238215 : 279238

Staphylococcus_phage(96.3%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002443518.1\|238215_239625_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	7.7e-174	63.0
WP_002443516.1\|239614_240616_+	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	3.1e-100	53.3
WP_037541567.1\|240612_240861_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	2.0e-37	88.0
WP_037541521.1\|240932_241406_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	1.6e-46	57.1
WP_002443510.1\|241386_242169_+	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	4.5e-107	74.1
WP_002443508.1\|242247_243840_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.8e-280	88.3
WP_044466753.1\|244215_245412_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	7.2e-197	87.2
WP_002443505.1\|245518_246427_+	NERD domain-containing protein	A0A2H4PQQ8	Staphylococcus_phage	2.4e-107	80.9
WP_002443503.1\|246582_247419_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	4.5e-113	71.1
WP_080981423.1\|247695_248052_-	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	1.3e-08	35.0
WP_002443500.1\|248045_248411_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	9.3e-39	66.1
WP_044466752.1\|248508_248817_-	hypothetical protein	NA	NA	NA	NA
WP_037541519.1\|249110_249824_+	transaldolase	H8ZNI7	Synechococcus_phage	6.5e-20	38.2
WP_044466751.1\|249982_250426_+	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	8.7e-23	51.0
WP_002443492.1\|250412_250856_-	competence protein ComK	NA	NA	NA	NA
WP_002443491.1\|250869_251346_-	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	2.2e-32	46.8
WP_002443489.1\|251554_251773_+	hypothetical protein	NA	NA	NA	NA
WP_002443487.1\|252087_252939_+	glucosaminidase domain-containing protein	A0A1W6JNR1	Staphylococcus_phage	4.9e-30	46.4
WP_002443485.1\|253256_254747_+	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	4.7e-20	91.1
WP_002443483.1\|255171_256215_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	5.8e-134	65.9
WP_002443481.1\|256221_256854_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-89	79.5
WP_002443479.1\|256865_258047_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.9e-179	77.9
WP_002443477.1\|258090_258549_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.9e-60	84.9
WP_002443476.1\|258621_259623_-	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	2.0e-139	73.9
WP_170080836.1\|259870_260698_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_037541517.1\|261261_261663_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_044466750.1\|261736_262300_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	2.3e-60	62.2
WP_002443468.1\|262296_263256_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	4.3e-67	85.4
WP_044466749.1\|263362_264583_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	3.9e-182	83.5
WP_044466748.1\|264879_267294_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	88.8
WP_002443464.1\|267317_267629_+	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	3.5e-34	68.9
WP_170080837.1\|268132_279238_+	DUF1542 domain-containing protein	A0A2H4PQU6	Staphylococcus_phage	9.1e-52	31.9

DBSCAN-SWA_3

396987 : 406128

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_037541493.1\|396987_397992_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.7e-05	29.1
WP_170080841.1\|397993_399019_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_002443262.1\|399039_400179_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.1e-85	45.0
WP_002443260.1\|400194_400458_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	9.8e-06	42.6
WP_002443258.1\|400889_403181_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	1.7e-32	34.8
WP_037541491.1\|403317_405591_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	1.8e-63	28.3
WP_002443255.1\|405609_406128_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.1e-29	45.5

DBSCAN-SWA_4

534527 : 544363

Bacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002443002.1\|534527_535415_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	2.7e-39	32.1
WP_037541466.1\|535467_536001_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_037541465.1\|536098_536830_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	7.9e-05	27.8
WP_002442997.1\|536822_537365_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.2e-10	33.8
WP_002442995.1\|537357_538095_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_002442993.1\|538230_538956_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.6e-45	40.9
WP_002442991.1\|538939_540703_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.4e-33	32.4
WP_037541463.1\|540975_541515_+	ECF transporter S component	NA	NA	NA	NA
WP_002433578.1\|541677_541926_-	ferredoxin	A0A127AYY7	Bacillus_phage	2.0e-16	50.7
WP_037541461.1\|542034_542997_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002442984.1\|542983_544363_+	ATP-dependent DNA helicase RecQ	M1PGQ0	Moumouvirus	8.1e-59	33.7

DBSCAN-SWA_5

862781 : 955475

116

Staphylococcus_phage(79.45%)

plate,holin,capsid,head,terminase,integrase,tail,tRNA,portal

attL 893432:893449|attR 954237:954254

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002442483.1\|862781_863714_-\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	3.6e-10	31.1
WP_002442482.1\|863706_864195_-	peptide deformylase	NA	NA	NA	NA
WP_002442481.1\|864412_864616_+	TM2 domain-containing protein	NA	NA	NA	NA
WP_052497322.1\|864681_865752_-	hypothetical protein	NA	NA	NA	NA
WP_002442477.1\|865962_868371_-	primosomal protein N'	NA	NA	NA	NA
WP_037541383.1\|868370_869570_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	7.1e-43	31.8
WP_002442473.1\|869794_870007_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_002442471.1\|870006_870630_-	guanylate kinase	A0A143DIC6	Abalone_herpesvirus	2.1e-22	34.7
WP_002442469.1\|870992_872690_+	fibronectin-binding domain-containing protein	NA	NA	NA	NA
WP_002442468.1\|872751_873153_-	VOC family protein	NA	NA	NA	NA
WP_044466288.1\|873703_873928_-	hypothetical protein	NA	NA	NA	NA
WP_002442463.1\|873956_874568_-	orotate phosphoribosyltransferase	S4W4D9	Pandoravirus	1.3e-24	36.4
WP_002442461.1\|874568_875261_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_044466289.1\|875295_878469_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_002442458.1\|878461_879562_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	3.3e-63	36.6
WP_002442456.1\|879562_880840_-	dihydroorotase	NA	NA	NA	NA
WP_002442454.1\|880858_881740_-	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	1.5e-29	31.9
WP_002442452.1\|881766_883074_-	uracil transporter	Q9KX94	Enterobacteria_phage	3.9e-55	35.2
WP_002442450.1\|883306_883834_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_002442448.1\|884309_885227_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_002442446.1\|885239_885716_-	signal peptidase II	NA	NA	NA	NA
WP_002442444.1\|885891_886689_-	VOC family protein	NA	NA	NA	NA
WP_044466290.1\|887012_887372_-	DUF3139 domain-containing protein	NA	NA	NA	NA
WP_002442438.1\|887684_890435_-\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	1.8e-86	26.4
WP_037541381.1\|890777_891431_-	DivIVA domain-containing protein	NA	NA	NA	NA
WP_170080915.1\|891459_892230_-	RNA-binding protein	NA	NA	NA	NA
WP_002442431.1\|892387_892678_-	YggT family protein	NA	NA	NA	NA
WP_002442429.1\|892689_893298_-	cell division protein SepF	NA	NA	NA	NA
WP_002442427.1\|893294_893969_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
893432:893449	attL	NA	NA	NA	NA
WP_037541550.1\|893986_894778_-	peptidoglycan editing factor PgeF	NA	NA	NA	NA
WP_002442422.1\|895052_896237_-	cell division protein FtsZ	NA	NA	NA	NA
WP_002442420.1\|896269_897670_-	cell division protein FtsA	NA	NA	NA	NA
WP_044466292.1\|897773_899189_-	FtsQ-type POTRA domain-containing protein	NA	NA	NA	NA
WP_002442417.1\|899204_900554_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA
WP_044466293.1\|900555_901521_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA
WP_002442413.1\|901702_904039_-	penicillin-binding protein	NA	NA	NA	NA
WP_049402012.1\|904019_904421_-	cell division protein FtsL	NA	NA	NA	NA
WP_037541375.1\|904433_905369_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_002442408.1\|905383_905815_-	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_002442407.1\|905958_907572_-	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA
WP_002442405.1\|907760_908201_+	N-acetyltransferase	NA	NA	NA	NA
WP_002442403.1\|908435_909122_-	noncanonical pyrimidine nucleotidase, YjjG family	NA	NA	NA	NA
WP_002442402.1\|909240_909375_-	beta-class phenol-soluble modulin	NA	NA	NA	NA
WP_002442400.1\|909423_909558_-	beta-class phenol-soluble modulin	NA	NA	NA	NA
WP_170080847.1\|909611_909746_-	beta-class phenol-soluble modulin	NA	NA	NA	NA
WP_002442394.1\|909783_909918_-	beta-class phenol-soluble modulin	NA	NA	NA	NA
WP_002442393.1\|910675_911848_+	MFS transporter	NA	NA	NA	NA
WP_170080848.1\|912046_913504_-	CHAP domain-containing protein	A0A0N6WMR3	Staphylococcus_phage	1.0e-216	75.1
WP_126493787.1\|913513_913813_-\|holin	phage holin	Q4ZCR8	Staphylococcus_virus	8.8e-27	68.0
WP_126493788.1\|913858_914005_-	XkdX family protein	A0A2H4J8V3	uncultured_Caudovirales_phage	5.8e-16	79.2
WP_126493789.1\|913997_914378_-	hypothetical protein	NA	NA	NA	NA
WP_126493790.1\|914392_916018_-\|plate	BppU family phage baseplate upper protein	A0A1W6JNS7	Staphylococcus_phage	4.9e-87	95.2
WP_126493791.1\|916072_917977_-	glucosaminidase domain-containing protein	A0A1W6JNR1	Staphylococcus_phage	1.2e-307	99.5
WP_126493792.1\|918027_918414_-	hypothetical protein	A0A1W6JNR6	Staphylococcus_phage	4.4e-63	98.4
WP_070872838.1\|918397_918817_-	hypothetical protein	A0A1W6JNR2	Staphylococcus_phage	4.2e-75	100.0
WP_126493793.1\|918832_919993_-\|plate	BppU family phage baseplate upper protein	A0A1W6JNR8	Staphylococcus_phage	1.7e-214	99.2
WP_126493794.1\|920006_921884_-	DUF2817 domain-containing protein	A0A1W6JNS8	Staphylococcus_phage	0.0e+00	99.2
WP_126493795.1\|921884_923144_-\|tail	phage tail protein	A0A1W6JNY1	Staphylococcus_phage	3.6e-239	99.8
WP_070872845.1\|923154_924114_-\|tail	phage tail family protein	A0A1W6JNU3	Staphylococcus_phage	5.1e-185	99.4
WP_126493796.1\|924125_928001_-\|tail	phage tail protein	A0A1W6JNU6	Staphylococcus_phage	1.5e-219	95.7
WP_126493797.1\|928015_928360_-	hypothetical protein	A0A1W6JNR9	Staphylococcus_phage	5.0e-58	99.1
WP_095323405.1\|928404_928764_-\|tail	phage tail protein	A0A1W6JNQ1	Staphylococcus_phage	1.9e-60	100.0
WP_095323406.1\|928824_929379_-\|tail	phage major tail protein, TP901-1 family	A0A1W6JNU0	Staphylococcus_phage	1.4e-94	100.0
WP_126493798.1\|929424_929814_-	hypothetical protein	A0A1W6JNQ3	Staphylococcus_phage	1.3e-67	100.0
WP_126493799.1\|929824_930175_-	HK97 gp10 family phage protein	A0A1W6JNQ6	Staphylococcus_phage	1.3e-58	100.0
WP_126493800.1\|930176_930479_-	hypothetical protein	A0A1W6JNQ9	Staphylococcus_phage	1.4e-51	100.0
WP_126493801.1\|930475_930805_-\|head,tail	phage head-tail connector protein	A0A1W6JNR3	Staphylococcus_phage	2.1e-53	100.0
WP_126493802.1\|930806_931076_-	hypothetical protein	A0A1W6JNX0	Staphylococcus_phage	3.9e-42	100.0
WP_126493803.1\|931097_932024_-\|capsid	phage major capsid protein	A0A1W6JNT3	Staphylococcus_phage	5.1e-174	100.0
WP_126493804.1\|932041_932656_-	DUF4355 domain-containing protein	A0A1W6JNT6	Staphylococcus_phage	3.2e-39	100.0
WP_170080849.1\|932903_933056_-	hypothetical protein	A0A1W6JNR0	Staphylococcus_phage	8.9e-20	100.0
WP_170080850.1\|933042_933201_-	hypothetical protein	A0A1W6JNP6	Staphylococcus_phage	7.6e-22	100.0
WP_126493805.1\|933200_934151_-\|capsid	minor capsid protein	A0A1W6JNS6	Staphylococcus_phage	7.6e-165	100.0
WP_170080851.1\|934157_935693_-\|portal	phage portal protein	A0A1W6JNP8	Staphylococcus_phage	5.3e-293	100.0
WP_126493807.1\|935704_936988_-\|terminase	PBSX family phage terminase large subunit	A0A1W6JNP5	Staphylococcus_phage	4.3e-256	99.8
WP_126493808.1\|936990_937377_-	DNA-binding protein	A0A1W6JNP4	Staphylococcus_phage	7.3e-66	100.0
WP_126493809.1\|937413_937614_-	hypothetical protein	A0A1W6JNQ8	Staphylococcus_phage	2.6e-27	100.0
WP_126493810.1\|937833_938250_-	transcriptional regulator	A0A1W6JNV8	Staphylococcus_phage	6.4e-76	100.0
WP_126493811.1\|938320_938491_-	regulator	A0A1W6JNS3	Staphylococcus_phage	2.1e-25	100.0
WP_126493812.1\|938496_938637_-	DUF1381 domain-containing protein	A0A1W6JNS9	Staphylococcus_phage	1.2e-15	97.8
WP_002442331.1\|938673_939099_-	dUTP diphosphatase	A0A1W6JNN6	Staphylococcus_phage	5.2e-73	99.3
WP_153227380.1\|939098_939269_-	hypothetical protein	A0A1W6JNR7	Staphylococcus_phage	6.3e-22	100.0
WP_126493813.1\|939312_939405_-	DUF1024 family protein	NA	NA	NA	NA
WP_002442327.1\|939406_939583_-	hypothetical protein	A0A1W6JNN8	Staphylococcus_phage	1.2e-28	100.0
WP_126493814.1\|939569_939839_-	hypothetical protein	A0A1W6JNN9	Staphylococcus_phage	6.6e-42	100.0
WP_002469958.1\|940285_940444_-	hypothetical protein	A0A1W6JNP9	Staphylococcus_phage	6.4e-21	100.0
WP_126493815.1\|940446_940644_-	hypothetical protein	A0A1W6JNU5	Staphylococcus_phage	7.8e-32	100.0
WP_126493816.1\|940745_940940_-	hypothetical protein	A0A1W6JNR4	Staphylococcus_phage	7.4e-27	96.9
WP_002442307.1\|940932_941340_-	DUF1064 domain-containing protein	A0A1W6JNS0	Staphylococcus_phage	1.6e-71	96.3
WP_126493817.1\|941348_941594_-	hypothetical protein	A0A1W6JNN7	Staphylococcus_phage	2.5e-40	96.3
WP_168995397.1\|941596_941752_-	hypothetical protein	A0A1W6JNM0	Staphylococcus_phage	4.5e-19	94.1
WP_126493818.1\|941745_942516_-	ATP-binding protein	A0A1W6JNQ7	Staphylococcus_phage	5.2e-140	96.5
WP_126493819.1\|942526_943291_-	conserved phage C-terminal domain-containing protein	W5R8N2	Staphylococcus_phage	7.8e-88	78.9
WP_126493820.1\|943277_943958_-	hypothetical protein	A0A1W6JNM5	Staphylococcus_phage	4.8e-121	94.1
WP_126493821.1\|943958_944510_-	HNH endonuclease	A0A1W6JNP0	Staphylococcus_phage	1.3e-103	100.0
WP_126493822.1\|944522_944942_-	single-stranded DNA-binding protein	A0A1W6JNT4	Staphylococcus_phage	3.7e-63	100.0
WP_126493823.1\|944938_945586_-	ERF family protein	A0A1W6JNQ5	Staphylococcus_phage	7.8e-113	97.2
WP_095323496.1\|945578_945800_-	DUF2483 family protein	A0A1W6JNQ2	Staphylococcus_phage	1.1e-34	98.6
WP_126493824.1\|945799_946048_-	chordopoxvirus fusion protein	A0A1W6JNM8	Staphylococcus_phage	2.2e-07	100.0
WP_162837223.1\|946109_946283_-	hypothetical protein	A0A1W6JNL3	Staphylococcus_phage	1.9e-21	96.5
WP_002442287.1\|946296_946506_-	hypothetical protein	A0A1W6JNP3	Staphylococcus_phage	2.6e-30	94.2
WP_002436523.1\|946593_946800_+	hypothetical protein	A0A141VTR0	Staphylococcus_phage	4.6e-11	55.2
WP_170080852.1\|946785_946935_-	hypothetical protein	Q4ZC32	Staphylococcus_virus	1.9e-06	61.2
WP_072098734.1\|947021_947255_-	DUF2829 domain-containing protein	A0A0N9SKI8	Staphylococcus_phage	4.3e-37	93.5
WP_168992829.1\|947351_948194_-	ParB N-terminal domain-containing protein	A0A141E1C9	Streptococcus_phage	1.7e-30	31.8
WP_170080916.1\|948990_949437_-	HNH endonuclease	NA	NA	NA	NA
WP_145471282.1\|949437_949815_+	DUF2513 domain-containing protein	A0A1W6JNL0	Staphylococcus_phage	1.0e-56	91.9
WP_168992827.1\|949806_949983_-	hypothetical protein	A0A1W6JNL1	Staphylococcus_phage	1.1e-05	64.9
WP_170080853.1\|950016_950805_-	phage antirepressor Ant	A0A2H4J5J5	uncultured_Caudovirales_phage	3.7e-109	76.4
WP_053018059.1\|950804_950999_-	helix-turn-helix transcriptional regulator	A0A0F6N3M9	Staphylococcus_phage	2.5e-22	87.5
WP_119528113.1\|951252_951591_+	helix-turn-helix transcriptional regulator	R4IH08	Staphylococcus_phage	2.4e-33	60.9
WP_170080854.1\|951604_952276_+	ImmA/IrrE family metallo-endopeptidase	A0A0F6N3H6	Staphylococcus_phage	1.7e-46	44.8
WP_170080855.1\|952361_953030_+	hypothetical protein	A0A1J0MG42	Staphylococcus_phage	2.1e-28	34.7
WP_170080856.1\|953080_954127_+\|integrase	site-specific integrase	A0A2H4J9L9	uncultured_Caudovirales_phage	9.2e-148	73.0
WP_002442266.1\|954385_954895_-	metallophosphoesterase	NA	NA	NA	NA
954237:954254	attR	NA	NA	NA	NA
WP_037541367.1\|954887_955475_-	XTP/dITP diphosphatase	D2KCJ6	Cassava_brown_streak_virus	5.8e-14	31.1

DBSCAN-SWA_6

1045120 : 1053590

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002442118.1\|1045120_1045687_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	3.8e-31	41.2
WP_002442115.1\|1045683_1046718_-	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	4.1e-63	42.7
WP_002442113.1\|1046710_1048195_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.0e-48	32.8
WP_002442111.1\|1048173_1050363_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.4e-139	40.5
WP_037541307.1\|1050355_1051027_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_002442107.1\|1051028_1051289_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_002442106.1\|1051285_1051993_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	5.6e-48	43.8
WP_002442104.1\|1051993_1053121_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_037541305.1\|1053107_1053590_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	1.8e-21	42.7

DBSCAN-SWA_7

1293272 : 1302187

uncultured_Caudovirales_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002441490.1\|1293272_1294052_-	ATP-binding cassette domain-containing protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	4.8e-16	32.0
WP_002441488.1\|1294048_1295008_-	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	2.9e-15	92.0
WP_002441487.1\|1294991_1295966_-	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	6.8e-161	95.4
WP_002441483.1\|1296221_1297190_-	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.8e-180	96.9
WP_049402023.1\|1297310_1299416_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	95.7
WP_037541178.1\|1299378_1299777_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.7e-63	89.4
WP_002441478.1\|1300806_1301673_+	DMT family transporter	NA	NA	NA	NA
WP_002441476.1\|1301686_1302187_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	4.5e-52	72.3

DBSCAN-SWA_8

1320226 : 1327882

Pandoravirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002441461.1\|1320226_1321387_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	3.4e-26	35.7
WP_002441459.1\|1321376_1321964_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.7
WP_002441456.1\|1322270_1322942_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.2e-65	56.3
WP_002441455.1\|1322943_1323363_+	6-carboxytetrahydropterin synthase QueD	S4U060	uncultured_phage	2.4e-06	23.5
WP_002441452.1\|1323366_1324080_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	2.1e-50	42.7
WP_002441451.1\|1324176_1324776_+	hypothetical protein	NA	NA	NA	NA
WP_002441449.1\|1325195_1325633_+	DM13 domain-containing protein	NA	NA	NA	NA
WP_037541172.1\|1325686_1326160_+	DoxX family membrane protein	NA	NA	NA	NA
WP_002441446.1\|1326134_1326824_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.7e-36	37.0
WP_002441443.1\|1326826_1327882_+	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.8e-19	30.4

DBSCAN-SWA_9

1787576 : 1792888

Staphylococcus_phage(57.14%)

terminase,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044466984.1\|1787576_1788251_+\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.9e-119	91.1
WP_044466905.1\|1788396_1789218_+	bifunctional DNA primase/polymerase	Q4ZE69	Staphylococcus_phage	1.9e-100	66.3
WP_044466906.1\|1789192_1789474_+	hypothetical protein	Q4ZE68	Staphylococcus_phage	5.5e-23	58.3
WP_044466907.1\|1789470_1790115_+	pathogenicity island protein	Q4ZE67	Staphylococcus_phage	3.2e-74	63.6
WP_044466908.1\|1790111_1790696_+	hypothetical protein	NA	NA	NA	NA
WP_049402102.1\|1791063_1791396_+	hypothetical protein	A0A2H4JHK4	uncultured_Caudovirales_phage	5.3e-49	90.0
WP_002454454.1\|1791477_1792065_+	pathogenicity island protein	A0A2H4JBG0	uncultured_Caudovirales_phage	2.6e-43	51.0
WP_002502290.1\|1792064_1792280_+	hypothetical protein	NA	NA	NA	NA
WP_002502291.1\|1792318_1792888_+\|terminase	terminase small subunit	A0A2H4JBF3	uncultured_Caudovirales_phage	5.1e-84	82.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP051645

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP051643

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection