CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP052760	Pseudomonas aeruginosa strain LYT4 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	1	0
NZ_CP052759	Pseudomonas aeruginosa strain LYT4 chromosome, complete genome	2 crisprs	csa3,DEDDh,cas3,DinG,WYL,cas4	0	1	9	3

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18090 : 57006

Lysinibacillus_phage(20.0%)

integrase,transposase

attL 14042:14055|attR 58400:58413

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
14042:14055	attL	NA	NA	NA	NA
WP_004577240.1\|18090_19053_-\|transposase	IS30-like element ISPpu17 family transposase	W5R8L2	Staphylococcus_phage	9.7e-43	37.7
WP_019818069.1\|19707_21264_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	1.3e-121	46.7
WP_019719038.1\|21345_21681_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_078451037.1\|21677_22046_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_105446667.1\|22493_22976_-	N-acetyltransferase	NA	NA	NA	NA
WP_105446666.1\|23154_24141_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	4.6e-16	38.5
WP_108116213.1\|24194_24968_-	hypothetical protein	NA	NA	NA	NA
WP_105446664.1\|24979_25255_-	hypothetical protein	NA	NA	NA	NA
WP_108116215.1\|25279_25507_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_108116217.1\|25503_25788_-	hypothetical protein	NA	NA	NA	NA
WP_105446662.1\|26122_26413_-	hypothetical protein	NA	NA	NA	NA
WP_105446661.1\|26423_26621_-	hypothetical protein	NA	NA	NA	NA
WP_123809510.1\|26638_26875_-	hypothetical protein	NA	NA	NA	NA
WP_105446659.1\|27230_27536_-	hypothetical protein	NA	NA	NA	NA
WP_105446688.1\|27556_27850_-	hypothetical protein	NA	NA	NA	NA
WP_105446658.1\|27948_28263_-	hypothetical protein	NA	NA	NA	NA
WP_023121457.1\|28357_28645_-	hypothetical protein	A0A0K0L9C8	Pseudomonas_phage	1.6e-09	40.2
WP_023121456.1\|28659_28905_-	hypothetical protein	NA	NA	NA	NA
WP_108116219.1\|28922_29207_-	hypothetical protein	NA	NA	NA	NA
WP_004574636.1\|29323_30613_-\|transposase	ISL3-like element ISPpu12 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.5e-86	40.4
WP_003821921.1\|30634_31147_-	signal peptidase II	NA	NA	NA	NA
WP_004364974.1\|31150_32047_-	cation transporter	NA	NA	NA	NA
WP_009403731.1\|32142_32550_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_169433270.1\|32698_34057_-	DUF1329 domain-containing protein	NA	NA	NA	NA
WP_169433271.1\|34074_35736_-	DUF1302 domain-containing protein	NA	NA	NA	NA
WP_169433272.1\|35842_36274_+\|transposase	IS200/IS605 family transposase	Q331U4	Clostridium_botulinum_C_phage	3.9e-20	39.4
WP_048512690.1\|36405_38814_-	MMPL family transporter	NA	NA	NA	NA
WP_169433273.1\|38810_39902_-	glycosyl hydrolase	NA	NA	NA	NA
WP_042919629.1\|39988_41311_-	MFS transporter	NA	NA	NA	NA
WP_169433274.1\|41314_42595_-	serine/threonine protein phosphatase	NA	NA	NA	NA
WP_042930316.1\|43014_44076_+	TetR family transcriptional regulator	NA	NA	NA	NA
WP_009394380.1\|44355_44955_-	methyl-accepting chemotaxis transducer	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-24	37.1
WP_079281431.1\|44944_46249_-	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_009394383.1\|46256_47066_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	9.4e-15	25.1
WP_009394385.1\|47062_47863_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-16	29.7
WP_009394387.1\|47859_48726_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_023047470.1\|49672_50008_+	hypothetical protein	NA	NA	NA	NA
WP_024718243.1\|49994_50234_+	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA
WP_024718244.1\|50249_50627_+	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA
WP_024718245.1\|50635_51037_+	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA
WP_023047517.1\|51033_51672_+	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA
WP_023047516.1\|51671_52478_+	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA
WP_023047515.1\|52467_52611_+	hypothetical protein	NA	NA	NA	NA
WP_169433240.1\|52646_53924_-\|transposase	ISL3 family transposase	A0A2D1GQC1	Lysinibacillus_phage	4.7e-85	40.6
WP_000098298.1\|53936_54971_-	permease	NA	NA	NA	NA
WP_000349485.1\|55082_55397_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_169433275.1\|55531_55750_-	hypothetical protein	NA	NA	NA	NA
WP_023093702.1\|55764_56052_-	hypothetical protein	NA	NA	NA	NA
WP_023093701.1\|56122_56344_-	hypothetical protein	NA	NA	NA	NA
WP_023093700.1\|56343_57006_-\|integrase	site-specific integrase	NA	NA	NA	NA
58400:58413	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP052759

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP052759_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052759_1

346448-346561

Orphan

Consensus_repeat	Method
GGCCAAAGAACTGGAGGGCAAGGTATGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP052759_1

>merge|NZ_CP052759|1|346448-346561|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGAGCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGTGGCCAAAGAACTGGAGGGCAAGGTATGA

>NZ_CP052759|1|1|346448-346561|CRISPRCasFinder
GGCCAAAGAACTGGAGGGCAAGGTATGA	GCCAGCACAGCGTATCCCGCTCCGTATCCCGTTCAACAGGCTCTCCATCCAGAAGCGT
GGCCAAAGAACTGGAGGGCAAGGTATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052759.1\|WP_003112941.1\|350102_351155_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP052759.1\|WP_003084297.1\|340252_341623_+\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|180994
NZ_CP052759.1\|WP_010793554.1\|351741_352353_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239267
NZ_CP052759.1\|WP_003112942.1\|351133_351637_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP052759.1\|WP_003084301.1\|343260_344358_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP052759.1\|WP_003084290.1\|338828_340187_+\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP052759.1\|WP_003112938.1\|338035_338788_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|336781
NZ_CP052759.1\|WP_003084299.1\|341738_342842_+\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP052759.1\|WP_003112937.1\|336380_337757_-\|glutamine-synthetase	unknown	unknown	gnl\|CDD\|223252
NZ_CP052759.1\|WP_003084303.1\|344412_345567_+\|polyamine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|183226
NZ_CP052759.1\|WP_003118763.1\|352351_353371_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP052759.1\|WP_003084320.1\|353390_354143_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052759.1\|WP_003121723.1\|354191_354890_+\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP052759.1\|WP_003112945.1\|355731_356226_+\|DUF523-domain-containing-protein	unknown	unknown	gnl\|CDD\|224597
NZ_CP052759.1\|WP_003111119.1\|333296_334175_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP052759.1\|WP_003084339.1\|356228_356921_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_CP052759.1\|WP_003142587.1\|347604_349992_-\|penicillin-acylase-family-protein	unknown	unknown	gnl\|CDD\|225241
NZ_CP052759.1\|WP_003084327.1\|354911_355466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052759.1\|WP_003160940.1\|335063_336125_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP052759.1\|WP_003107783.1\|334337_335003_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228

Protein	Function_ID	Function_description	E-value
NZ_CP052759.1\|WP_003112941.1\|350102_351155_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.54039e-32
NZ_CP052759.1\|WP_003084297.1\|340252_341623_+\|aspartate-aminotransferase-family-protein	gnl\|CDD\|180994	PRK07480, PRK07480, putative aminotransferase; Validated.	0
NZ_CP052759.1\|WP_010793554.1\|351741_352353_-\|hypothetical-protein	gnl\|CDD\|239267	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.	0.00347374
NZ_CP052759.1\|WP_003084339.1\|356228_356921_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	3.29364e-79
NZ_CP052759.1\|WP_003084301.1\|343260_344358_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP052759.1\|WP_003084290.1\|338828_340187_+\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	5.71424e-158
NZ_CP052759.1\|WP_003112938.1\|338035_338788_+\|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein	gnl\|CDD\|336781	pfam07722, Peptidase_C26, Peptidase C26. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyze the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to pfam00117, but contain extensions in four loops and at the C-terminus.	1.81471e-108
NZ_CP052759.1\|WP_003084299.1\|341738_342842_+\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	0
NZ_CP052759.1\|WP_003112937.1\|336380_337757_-\|glutamine-synthetase	gnl\|CDD\|223252	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism].	1.09186e-161
NZ_CP052759.1\|WP_003084303.1\|344412_345567_+\|polyamine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|183226	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG.	0
NZ_CP052759.1\|WP_003118763.1\|352351_353371_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	3.48481e-56
NZ_CP052759.1\|WP_003121723.1\|354191_354890_+\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	9.16398e-77
NZ_CP052759.1\|WP_003112945.1\|355731_356226_+\|DUF523-domain-containing-protein	gnl\|CDD\|224597	COG1683, COG1683, Uncharacterized conserved protein [Function unknown].	2.14015e-67
NZ_CP052759.1\|WP_003111119.1\|333296_334175_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP052759.1\|WP_003142587.1\|347604_349992_-\|penicillin-acylase-family-protein	gnl\|CDD\|225241	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only].	0
NZ_CP052759.1\|WP_003160940.1\|335063_336125_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.13657e-164
NZ_CP052759.1\|WP_003107783.1\|334337_335003_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.86557e-09

>NZ_CP052759.1|WP_003084303.1|344412_345567_+|polyamine-ABC-transporter-ATP-binding-protein
MAIASGAYKKALEGNQQPKEVLVKIDRVTKQFDETLAVDTVSLTINKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIFLDGQDITDLPPYERPINMMFQSYALFPHMSVAQNIAFGLKQDGLPKAEIDERVAEMLKLVHMTQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERVGVTCVMVTHDQEEAMTMAQRIAIMHLGCIEQIGSPMDIYETPASRLVCEFIGNVNLFDGVLVEDVQDHAVIACPQLENPIYIGHGISTRAEDKRITYALRPEKVMISAQKPDNLEHAGHNWAQGTVYDIAYLGGHSVYYIKLASGMIVQAFMANAERHVARPTWDQSVYISWYDDSGVVLQS
>NZ_CP052759.1|WP_003084301.1|343260_344358_+|polyamine-ABC-transporter-substrate-binding-protein
MQHSIGKTLLVAALATAIAGPVQAEKKSLHIYNWTDYIAPTTLKDFTKESGIDVSYDVFDSNETLEGKLVSGHSGYDIVVPSNNFLGKQIQAGAFQKLDKSKLPNWKNLDPALLKQLEVSDPGNQYAVPYLWGTNGIGYNVAKVKEVLGDQPIDSWAILFEPENMKKLAKCGVAFMDSGDEMLPAALNYLGLDPNTHDPKDYKKAEEVLTKVRPYVSYFHSSKYISDLANGNICVAFGYSGDVFQAAARAEEAGKGIDIQYVIPKEGANLWFDLMAIPADAKAADNAYAFIDYLLRPEVIAKVSDYVGYANAIPGARPLMDKSVSDSEEVYPPQAVLDKLYVSAVLPAKVLRLQTRTWTRIKTGK
>NZ_CP052759.1|WP_003084299.1|341738_342842_+|polyamine-ABC-transporter-substrate-binding-protein
MMKRFGKTLLALTLAGSVAGMAQAADNKVLHVYNWSDYIAPDTLEKFTKETGIKVVYDVYDSNEVLEAKLLAGKSGYDVVVPSNSFLAKQIKAGVYQKLDKSKLPNWKNLNKDLMHTLEVSDPGNEHAIPYMWGTIGIGYNPDKVKAAFGDNAPVDSWDLVFKPENIQKLKQCGVSFLDSPTEILPAALHYLGYKPDTDNPKELKAAEELFLKIRPYVTYFHSSKYISDLANGNICVAIGYSGDIYQAKSRAEEAKNKVTVKYNIPKEGAGSFFDMVAIPKDAENTEGALAFVNFLMKPEIMAEITDVVQFPNGNAAATPLVSEAIRNDPGIYPSEEVMKKLYTFPDLPAKTQRAMTRSWTKIKSGK
>NZ_CP052759.1|WP_003084297.1|340252_341623_+|aspartate-aminotransferase-family-protein
MNSQITNAKTREWQALSRDHHLPPFTDYKQLNEKGARIITKAEGVYIWDSEGNKILDAMAGLWCVNVGYGREELVQAATRQMRELPFYNLFFQTAHPPVVELAKAIADVAPEGMNHVFFTGSGSEANDTVLRMVRHYWATKGQPQKKVVIGRWNGYHGSTVAGVSLGGMKALHEQGDFPIPGIVHIAQPYWYGEGGDMSPDEFGVWAAEQLEKKILEVGEENVAAFIAEPIQGAGGVIVPPDTYWPKIREILAKYDILFIADEVICGFGRTGEWFGSQYYGNAPDLMPIAKGLTSGYIPMGGVVVRDEIVEVLNQGGEFYHGFTYSGHPVAAAVALENIRILREEKIIEKVKAETAPYLQKRWQELADHPLVGEARGVGMVAALELVKNKKTRERFTDKGVGMLCREHCFRNGLIMRAVGDTMIISPPLVIDPSQIDELITLARKCLDQTAAAVLA
>NZ_CP052759.1|WP_003084290.1|338828_340187_+|glutamine-synthetase
MTTKLDQLTSWLKERKITEVECLISDLTGIARGKISPTNKFIAEKGMRLPESVLLQTVTGDYVEDDIYYDLLDPADIDMVCRPDENAVFLVPWAIEPTAMVIHDTFDKLGNPIELSPRNILKRVLKMYADKGWRPIVAPEMEFYLTKRSDDPDYPLQAPVGRSGRQETGRQSFSIDAANEFDPLFEDMYDWCEAQGLDLDTLIHEEGTAQMEINFRHGDALDLADQILVFKRTMREAALKHNVAATFMAKPMTGEPGSAMHLHQSIVDVKTGKNIFSNADGTMSELFLHHIGGLQKFIPEVLPLFAPNVNSFRRFLPDTSAPVNVEWGEENRTVGLRVPDSSPENRRVENRLAGADANPYLALAASLLCGYIGMVEGIKPSAQVKGRGYERRNLRLPLTIEAALERMENCKPLEQYLGSKFISGYVAVKRAEHENFKRVISSWEREFLLLSV
>NZ_CP052759.1|WP_003112938.1|338035_338788_+|gamma-glutamyl-gamma-aminobutyrate-hydrolase-family-protein
MSRLPLIGVTACTKQIGLHPYHIAGDKYLRAVVNGAGGLPLIIPALGESIDQAALLDSVDGLLFTGSPSNVEPRHYSGPASEPGTLHDSDRDATTLPLVRAAIDAGIPVLGICRGFQEMNVAFGGSLHQKVHEVGTFMDHREPADQPLEVQYAPRHAMHVQPGGVLAGIGLPSEFQVNSIHGQGVDRLAPGLRVEALAPDGLVEAISVEGAKAFALGVQWHPEWQVLTNPNYLAIFQAFGKACSKRAGQR
>NZ_CP052759.1|WP_003112937.1|336380_337757_-|glutamine-synthetase
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
>NZ_CP052759.1|WP_003160940.1|335063_336125_-|polyamine-ABC-transporter-substrate-binding-protein
MPRLSALLFLALAPWLAQAEETLRVYNWNDYIDPQVLESFQKDTGIRVEYHTFATAEELDKALRSGEAIDVAVPSHDTLPALLKDNLLRPLDFTQLPNRSHLDRQLLSKLAAVDPDNRHAVPYLWGAVGLAINTPQAEAAYGGPLPNSWSLLFDASQSQRLKSCGISLLDAPDETLAILLNYQGRNLGRTAPSQVRRAAEALHGLRPNLRYVDSERYIADLEGGRLCLAMAWVGDALRAAKAGQPVSFEVPQEGSVLFIDNLVIPAGAQHPREAHRFIDYLMQPKIAAQITAATLYPSGNADAAGFLDPALRQQPGLYPDRDTSRRLFALETPPEKLRPVVDEIWKAFRGASQ
>NZ_CP052759.1|WP_003107783.1|334337_335003_-|TetR/AcrR-family-transcriptional-regulator
MQPTSSTRKPRASSQARIAAILDAARGLLADEGIGGLTIYSVAERAEMPPSSVYHFFPSVPALLQGLTGEVHAAFRACLEQPVDHAGLRCWRDLSRIVEERMLAVYARDAAARQLILASHGLAEVTQADRQHDVQLGQAMRALFERHFLLPPLPTDIEIFSLAMELGDRVYALSVQRHGIIDARLAEEGMRVFDAYLGLYLPPILEKRSEPLSGFISDLNR
>NZ_CP052759.1|WP_003111119.1|333296_334175_-|N-carbamoylputrescine-amidase
MTRNVTVAATQMACSWDRPANIARAEKLVRQAAARGAQIILIQELFETPYFCQKPNPDYLQLATTVEENAAIAHFQALARELQVVLPISFFERAGRARFNSIAVIDADGGNLGVYRKSHIPDGPGYHEKYYFNPGDTGFKVWQTRYARIGVGICWDQWFPESARSMALLGAELLFYPTAIGSEPHDASISSRDHWQRVQQGHAGANLMPLVASNRIGREEQDGYDITFYGSSFIADPFGEKVEELNRTEEGILVHTFDLDALERTRSAWGVFRDRRPNLYGPLKTLDGSLES
>NZ_CP052759.1|WP_003142587.1|347604_349992_-|penicillin-acylase-family-protein
MKRTLTVIAVAVAAAAAGGAWYLHAKQPLRNGSLALAHLQAPVDVRYDERGVPHLYAQNQTDLYRALGYVHAQDRLFQMEMLRRLARGELAEVLGPKLVDTDRLFRTLRIRDHAAEYSARQDKQSQPWKVLEAYLDGVNQFQENNPAPLEFDLLGIPRRPFTPEDTLSIAGYMAYSFAAAFRTEPVLTYIRDELGSDYLRIFDLDWHPQGVLTPSGALGAGDWKDLGALARLSQQALEDAGLPQFEGSNAWVVAGSRTASGKPLLAGDPHIRFAAPAVWYEAQLSAPGFELYGHHQALNPFASLGHNRAFGWSLTMFQNDDLDLVAEKVNPDNPNQVWYQGEWVDLQSEEQEIAVKGAAPVKLTLRRSPHGPIVNDALGASSGKTPIAMWWAFLETENPVLDAFYQLNRADTLAKARAAASKIHSPGLNLVWANAAGDIGWWASAALPKRPEGVNPSFILDGSKGEADKSGFYPFADNPQEENPARGYIVSANFQPVPANGRPIPGYYNLADRGQWLDTQLADRGTKWNLDNSRALQLGNRTGYAPRLLAPLLPVLREVVDDAEGKRLVEQLAAWNGDYPVDSTAATLFNQLLFQIAEGALHDELGDAFFDSLIATRAIDSALPRLAGDADSPWWDDRRTERRETRADIVRTAWNASLAHLRSTLGNDPSGWLWGKAHTLTHEHALGQQALLRRLLNVGPFAAPGTHEVPNNLSAKIGPAPWAVTYGPSTRRLVDFADPTHSLGINPVGQSGVPFDGHYDDQAEAYIEGHYLPQHYEENEVKANSKGVLVLEPKR
>NZ_CP052759.1|WP_003112941.1|350102_351155_+|AraC-family-transcriptional-regulator
MQDDPSTSPLTHSATLRRLLYEALDALGLDPTRVYRSVYRRIPLPPPTLGGRLVHDNAPLFWTELAAVTGDADIGLHLGEAMKPRLLDVVGYLLLSARDLEEALRSFVRFQHILSGGFAARLEVEGETARLILDINYLGYASLRQQIECLMLLFLKLLALISDDEFVAERIEFRHRAPPRLGEHRRLFGRLPLFSRPHDALVFSAALLRRPSRNANPDMHDVLTRHAEEQSRELSENRLLNRVRYLIELRLGEGYGLRQCAAELGLGSGALQRALAAGGASFRQVRDEVRRQRASEMLLAGRAIREVAKACGFAELSPFYRAFRRWHAAPPEQYRARLAKREEGYSTSGT
>NZ_CP052759.1|WP_003112942.1|351133_351637_-|transcriptional-regulator
MSLRPTLALLALVSLPLMAAQNDPQPSSKELMKEHQAQIQNDLADVDYKRKRIVEANMNLTDQEGEKFWPIYNTYRTESDKLSKETLKLLLDYAQAYNSGNVSDDQASKLIERVDDLQEDRLELRDKYVKRIAKNVSPKRAMRFLQIEIQLDAIATLEIGRQVPLVE
>NZ_CP052759.1|WP_010793554.1|351741_352353_-|hypothetical-protein
MASLAPVFRVNAMTPRRKTLLVSLVGLLWAGGLLAAYWWFEIRYIRPFSEQTTLFSGDSLRLPAELAGPGAIRLVHFWDPACPCNVGNQQHLGELIERFAGKGVEFHVLQKPGSQGRLPDNLAALRPLAGLPGSEQLPASPAVAIWDRDGRLAYFGPYSEGAVCTSSNSFIEPILEALLQGRPVDATHTLAVGCYCPWTPGKG
>NZ_CP052759.1|WP_003118763.1|352351_353371_+|alpha/beta-hydrolase
MCSRAAEYPWVSPVARPRIDCSPEPPMSEAFNPDYLRQHLRPLAAAEADAAVLAYQAYYGLDLRSRHPRLQARLGSMAVDGRRLAVQAWLLPEARGSLLLMHGYYDHMGLYRHVVDWALGMGFSVLACDLPGHGLSEGERASIRDFAEYQAVFKGLLGQAAELDLAAPWHLCGQSTGGAILLDYLLHGGERPELGETILLAPLVRPRAWGWSKLSYRLLSPFVDSIPRRFSENSSDPQFLDFLREHDPLQPRTLPTAWVGALTRWVPRIERAPRRALSPLVVQGESDETVDWRHGLKVLREKFDEPRILLLEEARHHLANESEGLRRRYFDFLSDALGA
>NZ_CP052759.1|WP_003084320.1|353390_354143_-|hypothetical-protein
MRALLAFALLLVGLPALADPYQRLYQAAGWPDQRAHFSDALDAAQKRYQDKLPPALYQTLVDNSNRRFAPAEVDQRALNGLRENLPDSASPLNFFESPLGRKVVAAEVLATRRDQLLQHSNGLPRQTASEPRRALVKRLAQVLPAREAGAEVSLALAGVAADSLSQMLPGLPGLLGGGQTGQLLEGQRQRLVQQIGADLENTLLYVYRDLSDAELTQYVNFAESPAGRSYYQAALAALKAGLAVDQAVAP
>NZ_CP052759.1|WP_003121723.1|354191_354890_+|2OG-Fe(II)-oxygenase
MGRYCRHAADRLSRHRGGTLQWTMHINVNHPLLHRIVDELVDQGWSHQSIFMPERLTTRLAEECRTRAVAGDLTPAGIGRGDGQVIREGIRGDLTQWLEPGESEACDEYLRVMDSLRQALNASLFLGLEDFECHFALYPPGAYYQKHVDRFRDDDARTVSAVLYLNDAWLPEHGGALRLHLPQRQVDIQPTGGSLVVFMSAGTEHEVLPASRDRLSLTGWFRRRNESLLQLS
>NZ_CP052759.1|WP_003084327.1|354911_355466_-|hypothetical-protein
MLPTRSLLPFFLAPALLASAASQAAMEALDNDSLSQVTGQAGISLRLDLRAGAARVAWVDDGGSLSLRNLVIDNGCVKAGDCPDGRGGNIPLGAAQLGLSLPIFGVEQPTLALDVTTGSGGGQQLAISLPDLATINDQLIASGLPAQRIRLRVASDLYIGDNSIGRIELRDITDLRGTIKVWGH
>NZ_CP052759.1|WP_003112945.1|355731_356226_+|DUF523-domain-containing-protein
MQKVLVSRCLLGHLVRYDGGSHGPFDLLSRWHAQGRIVALCPEVAGGLPTPRPPAEIPGGQGGEVLDRLNRVFTVDGEDVSEAFLLGAEAAVELVRRHDIRMAVLKARSPSCGNLENYDGRFNGNRVAGEGVTAAALKRMGVLVFNEDELDRAAVCLAGLDAGG
>NZ_CP052759.1|WP_003084339.1|356228_356921_-|amino-acid-ABC-transporter-permease
MNSLQKLLEWLANLVELLGMAWPFLLQGAMYTVLFAAVSMVLGLILGFSVAVVRVTKVPVVSQIAAVYVSAFRGTPLLVQIFVLYYGLPSVGIEFTPVTAGILALTLNVAAYLSESMRGAILGIDKGQWEAGLSVGLTWGQTLWNIITPQALRLAVPSLSNSLISLIKDTSLISVITVTELMLATKEVIAETFQPLPLYLAAAGIYWLLSALFERVQKALENRLTAPLRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP052759_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052759_2

1955199-1955300

Orphan

Consensus_repeat	Method
GCGGCGGGTATCGGCGGATAACGCC	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP052759_2

>merge|NZ_CP052759|2|1955199-1955300|CRISPRCasFinder
GCGGCGGGTATCGGCGGATAACGCCTCCGGCGTTATTCGCCCTACGCGGAGGGTTCCCAGCTTTCGCTCCGCCGTTGCGGCGGGGTATCGGCGGATAACGCC

>NZ_CP052759|2|2|1955199-1955300|CRISPRCasFinder
GCGGCGGGTATCGGCGGATAACGCC	TCCGGCGTTATTCGCCCTACGCGGAGGGTTCCCAGCTTTCGCTCCGCCGTTG
CGGCGGGGTATCGGCGGATAACGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052759.1\|WP_049247811.1\|1963662_1963998_-\|tRNA-binding-protein	unknown	unknown	gnl\|CDD\|182232
NZ_CP052759.1\|WP_003114814.1\|1962007_1962649_+\|FMN-dependent-NADH-azoreductase	unknown	unknown	gnl\|CDD\|224103
NZ_CP052759.1\|WP_003114810.1\|1954169_1954796_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|236391
NZ_CP052759.1\|WP_003091546.1\|1950628_1952284_+\|cation-acetate-symporter	unknown	unknown	gnl\|CDD\|236495
NZ_CP052759.1\|WP_003091551.1\|1948730_1948952_-\|DUF2061-domain-containing-protein	unknown	unknown	gnl\|CDD\|225746
NZ_CP052759.1\|WP_033981897.1\|1955435_1956560_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225688
NZ_CP052759.1\|WP_003116401.1\|1962753_1963653_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP052759.1\|WP_003114806.1\|1946419_1947223_-\|VacJ-family-lipoprotein	unknown	unknown	gnl\|CDD\|225409
NZ_CP052759.1\|WP_003109184.1\|1957140_1958973_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP052759.1\|WP_003091533.1\|1961543_1961861_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052759.1\|WP_003114812.1\|1959035_1959599_-\|peptidylprolyl-isomerase-A	unknown	unknown	gnl\|CDD\|182824
NZ_CP052759.1\|WP_003114807.1\|1947226_1948588_-\|alpha/beta-fold-hydrolase	unknown	unknown	unknown
NZ_CP052759.1\|WP_003452840.1\|1949245_1950103_+\|glycine-betaine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270357
NZ_CP052759.1\|WP_003091534.1\|1960414_1961344_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP052759.1\|WP_003091540.1\|1956592_1956859_-\|DUF2790-domain-containing-protein	unknown	unknown	gnl\|CDD\|371321
NZ_CP052759.1\|WP_003109182.1\|1954904_1955063_+\|DUF3309-domain-containing-protein	unknown	unknown	gnl\|CDD\|378708
NZ_CP052759.1\|WP_003116397.1\|1945421_1946279_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP052759.1\|WP_016263235.1\|1959580_1960408_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP052759.1\|WP_003091547.1\|1950320_1950632_+\|DUF485-domain-containing-protein	unknown	unknown	gnl\|CDD\|225704
NZ_CP052759.1\|WP_003116398.1\|1952373_1954173_+\|cyclic-nucleotide-binding/CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225457

Protein	Function_ID	Function_description	E-value
NZ_CP052759.1\|WP_003114814.1\|1962007_1962649_+\|FMN-dependent-NADH-azoreductase	gnl\|CDD\|224103	COG1182, AcpD, Acyl carrier protein phosphodiesterase [Lipid metabolism].	1.18979e-103
NZ_CP052759.1\|WP_003114810.1\|1954169_1954796_+\|3'-5'-exonuclease	gnl\|CDD\|236391	PRK09145, PRK09145, 3'-5' exonuclease.	2.00701e-94
NZ_CP052759.1\|WP_003091546.1\|1950628_1952284_+\|cation-acetate-symporter	gnl\|CDD\|236495	PRK09395, actP, cation/acetate symporter ActP.	0
NZ_CP052759.1\|WP_003091551.1\|1948730_1948952_-\|DUF2061-domain-containing-protein	gnl\|CDD\|225746	COG3205, COG3205, Predicted membrane protein [Function unknown].	8.76037e-33
NZ_CP052759.1\|WP_033981897.1\|1955435_1956560_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225688	COG3146, COG3146, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP052759.1\|WP_003114806.1\|1946419_1947223_-\|VacJ-family-lipoprotein	gnl\|CDD\|225409	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane].	6.05055e-101
NZ_CP052759.1\|WP_003109184.1\|1957140_1958973_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.066e-156
NZ_CP052759.1\|WP_049247811.1\|1963662_1963998_-\|tRNA-binding-protein	gnl\|CDD\|182232	PRK10089, PRK10089, chaperone CsaA.	1.29885e-63
NZ_CP052759.1\|WP_003114812.1\|1959035_1959599_-\|peptidylprolyl-isomerase-A	gnl\|CDD\|182824	PRK10903, PRK10903, peptidylprolyl isomerase A.	5.29669e-93
NZ_CP052759.1\|WP_003116401.1\|1962753_1963653_-\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	1.27099e-12
NZ_CP052759.1\|WP_003452840.1\|1949245_1950103_+\|glycine-betaine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.55277e-117
NZ_CP052759.1\|WP_003091534.1\|1960414_1961344_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.24343e-39
NZ_CP052759.1\|WP_003091540.1\|1956592_1956859_-\|DUF2790-domain-containing-protein	gnl\|CDD\|371321	pfam10976, DUF2790, Protein of unknown function (DUF2790). This family of proteins with unknown function appear to be restricted to Pseudomonadaceae.	1.53651e-35
NZ_CP052759.1\|WP_003109182.1\|1954904_1955063_+\|DUF3309-domain-containing-protein	gnl\|CDD\|378708	pfam11752, DUF3309, Protein of unknown function (DUF3309). This family is conserved in bacteria but its function is not known.	2.8739e-06
NZ_CP052759.1\|WP_003116397.1\|1945421_1946279_-\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	1.4231e-96
NZ_CP052759.1\|WP_016263235.1\|1959580_1960408_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	2.13225e-42
NZ_CP052759.1\|WP_003091547.1\|1950320_1950632_+\|DUF485-domain-containing-protein	gnl\|CDD\|225704	COG3162, COG3162, Predicted membrane protein [Function unknown].	2.28294e-48
NZ_CP052759.1\|WP_003116398.1\|1952373_1954173_+\|cyclic-nucleotide-binding/CBS-domain-containing-protein	gnl\|CDD\|225457	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms].	0

>NZ_CP052759.1|WP_003109182.1|1954904_1955063_+|DUF3309-domain-containing-protein
MSLGTILLIILILLLIGGLPVFPHSRNWGYGPSGIIGALLVVLLVLLLLGMI
>NZ_CP052759.1|WP_003114810.1|1954169_1954796_+|3'-5'-exonuclease
MNTMVKLPDSRWPGWRRRLYWWMHEAVEAEEVISLDLETTSLDPRRADILSIGAVLVRRGKLVMGERLELYVEPPPSLDAESIRIHKLRRADLEGQLQLEQALRQVLAFIGDRPLLGYYLSFDVAVLNRHLRQLLDRQLHNPSIEISSLYHRKVSRHFPDAHIDLRFDTLARALDVPVSGRHTALGDAQAVALMFMRLLKGPAPKVIH
>NZ_CP052759.1|WP_003116398.1|1952373_1954173_+|cyclic-nucleotide-binding/CBS-domain-containing-protein
MPDSFNFASPPFDQLRPHQRETLKQALSVGYYAPGETLLEAGSAVPGLFVLLKGVVEERGDDGRVFAQYAADDLFDVRGLFSGSSKHRYLAIEESIVYELPASCFHQLCGENPGFARFFQADLAAKRQLAQRDGQNLAEFILTRIAREHLLPALEVEASLSLGDAARLQLSHGADALLVRLERDGPELGIVTRTDLMSAHFRDGRSELEAIGPLAHGPLASVELGDFLFDAMILMTRQRIERVAVTEDGQVIGLLHLTQVLSLFSTHSHVLALRIARADDLGDLRRCAETLDTLIATLAGNGIRLRFIMQLVSALNEQLLERLFELLLPPTLRGRCCLLVMGSEGRGEQLLKTDQDNALVLADDLPQEQALAMMQRFSAALLEFGYPPCPGGVMASRPEWCKPLAAWQAELRGTLLEGKPEQLLRLSILADAWPVAGNLQLFEPLRRQLRGFADGGERWLADIAAAALQFDTPLTFLGQLKTQDARLDLKRGGIFPIVHGIRTLALREGLETRGTLARIEALKRHKVLEARLADDLSESFELFLQLRLTRQLAGQRDGRQQGLDVSGMSRHDRDMLRYGLHVVKKFKQSVARQFHLETR
>NZ_CP052759.1|WP_003091546.1|1950628_1952284_+|cation-acetate-symporter
MIARLLAALGLAAFAPALWADALTGDVQRQPLNVSAIVMFVAFVGATLCITYWASKRNRSAADYYAAGGRITGFQNGLAIAGDYMSAASFLGISALVFTSGYDGLIYSIGFLVGWPIILFLIAERLRNLGKYTFADVASYRLKQKQIRTLSACGSLVVVAFYLIAQMVGAGKLIELLFGLNYHVAVVLVGILMVLYVLFGGMLATTWVQIIKAVLLLSGASFMAIMVLKHVNFDVSTLFSEAIKVHPKGEAIMSPGGLVKDPISAFSLGFALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFGAILLVSTNPDFKDATGALIGGNNMAAVHLADAVGGSLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYASVFKGGKANEKDELRVSKMTTVALGVVAIVLGILFEKQNIAFMVGLAFSIAASCNFPVLLLSMYWKKLTTRGAMIGGWMGLITAVGLMVLGPTIWVQILGHEKAIYPYEYPALFSMIVAFVGIWFFSITDKSAAADEERARFFPQFIRSQTGLGASGAVAH
>NZ_CP052759.1|WP_003091547.1|1950320_1950632_+|DUF485-domain-containing-protein
MNDSIYQRIDTNPRFKELVAKRERFAWILSSIMLGLYVIFILLIAFQPQLLGARISPDSSVTWGIPMGVGLILAAFILTGLYVRRANGEFDSLNQEILKEAQQ
>NZ_CP052759.1|WP_003452840.1|1949245_1950103_+|glycine-betaine-ABC-transporter-substrate-binding-protein
MRMMRRLLCWSAGLAMSAAVGMAAAADKPVITIGYVDGWSDSVATTHVAAEVIREKLGYEVKLMPVAAGIMWQGVARGKLDAMLSAWLPGTHGAYYEKMKDKVVNLAINYPDARIGLIVPEYVSANSIADLQAQKDAFGGRVVGIDAGAGVMIKTDEAIKQYGLDYKLVASSGSGMIAELTRAENEKKPVVVTGWIPHWMFAKWKLKFLDDPKKVYGDTEHVDTVANPALEAKAKPVWEFLKKFGWRDGNEVGQVMLAIQEGAKPEDAAKQWVAANPGRVKDWVQ
>NZ_CP052759.1|WP_003091551.1|1948730_1948952_-|DUF2061-domain-containing-protein
MLKTLTFTVMHFIIAFSVAYALTGSIAVGGLVAAVEPLCNSVGFYFHEKIWKRFEKDGAPRPASAHGWLHRHA
>NZ_CP052759.1|WP_003114807.1|1947226_1948588_-|alpha/beta-fold-hydrolase
MPHFLRFAALLGGLALGCANLAQARDVDAASYGYPLTNPFEATIATTPPELRPELPHSEDIDQKDYSLKLRPEREFALPDNFWPVKKLRYRLARQDHAAPLIFIIAGTGAHYASSFPEYLKKLFYQAGYHVVQLSSPTSWDFMASASRFATPGFSSDDADDLYRVMQAVRAQQRDLPVTDYYLTGYSLGALNAAFVSHLDESRRSFNFKKVLLLNPPVNLYTSVSNLDKLVETQVKGITDSRTFYEVVLSKLTRYFRQKGYVDINDAMLYDFQQSKQRLSNEEMAMLIGTSFRFSAADIAFTSDLVNRRGLITPPNYPINEGTSLEPFFKRALQCDFECYMTEQLIPMWRARYDGGSLTQLVNQVSLYKLQDYLHDSPKIAVMHNADDVILGPGDLGFLRRTFGERLTVYPYGGHCGNLNYKVNAQDMLDFFATPAAGQTQVASAALTQQAGN
>NZ_CP052759.1|WP_003114806.1|1946419_1947223_-|VacJ-family-lipoprotein
MSRTAHWMFALLLSAAASAQADEAAAPAELPPRQLDGDGFSRPLDQLKFNPGLDQREFERATLDALNMYDPWESWNRRVYHFNYRFDEWVFLPVVRGYEYVTPHFVRSGVSNFFDNLGDVPNLLNNLAQLKGKAAMETTARLLFNTTFGVLGLWDPATRMGLHKRSEDFGQTLGFYGVGSGPYLVLPILGPSNLRDTGGLVVDYVGEYQVNYLNVPQASGDHPEITALRVVDKRYNTSFRYGQMNSPFEYEKLRYIYTEARKLQIAE
>NZ_CP052759.1|WP_003116397.1|1945421_1946279_-|pirin-family-protein
MTRYRDVLELHTGHPASDGAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSHPHRGFETVTYMLEGRMRHEDHLGNRGLLKPGGVQWMTAAHGIIHSEMPEQVEGAMRGFQLWVNLPAKNKLAPAGYRDIEPEDVPRLETAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPHYYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERPVEIATNRLARLSEEGELSLRSEAGARVLVLAGKPLREPIVQYGPFVMNSREEIEQALRDYRDGVLAV
>NZ_CP052759.1|WP_033981897.1|1955435_1956560_+|GNAT-family-N-acetyltransferase
MPIQTLATLADIDAAEWDALLPPAQPFLRHAFLSALEDSHSVTPATGWRPAHRMLRDPQGRLCAALPAYVKAHSYGEYVFDWSWADACQRAGIRYYPKLLVGVPFTPVAGARLLGEDEGLQGLLASLGEEAEASGLSSIHVNFTDARADTLLAARDGWLERLGCQYHWHNRGYRDFQDFLEALSSRKRKQLRKEREQVGGQGIEFEWREGGQLSELEWDFVYLCYANTYLVRDRDPYLSREFFGLLAERMPEAIRVVFAHQRGKPVAMAFSLVAGDTLYGRYWGCLAEFDRLHFETCFYQGLEFAIGAGLARFDAGAQGEHKLIRGFEPVLTRSWHYLAHPGLRDAVAQFLEQERAGVRAYAEEAHGLLPYRQA
>NZ_CP052759.1|WP_003091540.1|1956592_1956859_-|DUF2790-domain-containing-protein
MKLASVVSAVITSLAPMAFAQDVDKDPGRGLPVEEYHYGMQLDVKNVLHRTDNSTRTGVVPVTVVYEDHSGELHKIRFLEWGGSTSNG
>NZ_CP052759.1|WP_003109184.1|1957140_1958973_-|ABC-transporter-ATP-binding-protein
MLYRRFERLIDPFRSASERMPPSEVLRFYVYFLRQVWPVFLALLVVGLIVALIEVALFSYLGRIVDLAQSTPSAEFFRVHANELIWMAVVALVLRPLFNALHDMLVHQSINPSMTNLIRWQNHRYVLKQSLGFFQNDFAGRIAQRIMQTGNSLRDSAVQVVDALWHVLIYTVSALVLFAEADWRLMIPLVLWVFAYVGALAYFVPQVKRRSVEASDSRSKLMGRIVDGYTNITTLKLFAHTRQEEDYAREAIGDQTLKSQRAGRVVTSMDVTITVMNGVLITGTTGLALWLWSQELISVGAIALATGLVIRINNMSGWIMWVVGGIFENIGQVQDGMQTIALPRKVVDREDAQPLRVERGEVEFEHIAFHYGKGSGVIQGLDLKVRPGEKIGLVGPSGAGKSTLVNLLLRLYDLESGRILVDGQDIAGVTQESLRAQIGMVTQDTSLLHRSIRDNLLYGRPGASDAELMEAVRKARADEFIPLLSDAEGRRGFDAHVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVESAIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLDKGHIAESGTHAELLAHGGLYARLWQHQTGGFVGVD
>NZ_CP052759.1|WP_003114812.1|1959035_1959599_-|peptidylprolyl-isomerase-A
MLKRLLIAACTLLFAGSLLAATPAAKPHVLIATSLGEIEVELDPAKAPISVKNFLEYVDSGYYDGTLFHRVIPGFMVQTGGFSAGMQEKKTRAPIKNEADNGLLNERGTLAMARTGVVDSATSQFFINLTDNDFLNHGARDFGYAVFGKVVRGMGVVDQIAKVPTTRRNGFADVPSDDVVILSAKRL
>NZ_CP052759.1|WP_016263235.1|1959580_1960408_-|alpha/beta-fold-hydrolase
MPDFQHRDCTLVYDDHPGPTERAPVLLLHGLGSSARDWEYQLPALLGHYRLLVPDLRGHGRSGKPRGGYSMAGFAEDCAALLDRLGCGPVHLVGISMGGMIGFQLACDRPDLLRSLTIVNSTPEVIPRKPREHLEVAKRKLLSRLLSLRIIGRALGRLLFPKAEQAGLREKIEARWAENDKRAYLASLDAIIGWGVQERLAEIACPTLVISADRDYTPVSLKQAYCERIADARLVVVEDSRHATPMDQPEIFNTTLLGFLADIDKTKEQPCSNVS
>NZ_CP052759.1|WP_003091534.1|1960414_1961344_-|LysR-family-transcriptional-regulator
MKAPRVTLDQWRTLQAVVDHGGFAQAAEALHRSQSSISYTVARMQEQLGVPLLRIDGRKAVLTEAGEVLLRRSRQLVKQAGQLEELAHHMEQGWEPEVRLVVDAAYPTARIVRSLSAFMPQSRGCRVLLREEVLSGVEEALIQGAADLAISGLIIPGHLGADLSVVEFVAVAHPDHPLHRLQRELTHQDLETQMQVVIRDSGRLQPRDHGWLGAEQRWTVGSLATAATFVGNGLGFAWLPRHIIERELQSGQLKPLPLSQGGVRQSRFYLYTNKEKPLGPASQILMEMLKSFANVPLNAPFAAPEPAAE
>NZ_CP052759.1|WP_003091533.1|1961543_1961861_+|hypothetical-protein
MKRLCCFALSLLPLSAFAYPIEVDPQLNGTEVSYSTQDIGRDMGAILLTNLGGQAAECTAVFRNGPETPKVRKGVIQPGQNSNFTAQFGRDIIKLRIKLTCKIAK
>NZ_CP052759.1|WP_003114814.1|1962007_1962649_+|FMN-dependent-NADH-azoreductase
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
>NZ_CP052759.1|WP_003116401.1|1962753_1963653_-|DMT-family-transporter
MNRRSALAALHGGALLFGLTGVFGKLASASPGVIVFGRALFAVLALGLFARLAGQAWRALGPAQWLRLALCGLLLAGHWVSFFIAVKTAGVAIATLGFASFPAFTVILEGLLFRERIHLAEGLLVVLVSLGLVLVTPNFDLASGATLGLLWAILSGLLFALLSLANRSNSGQVGPVQAALWQNLVVALCLLPFAVGELPALPALDWLWLALLGVFCTGLAHSLFVASLAVVKARTAALVFALEPVYGIAFAWLLFHETPGPRMFLGGALIILAIVLSARLGARGRKTAVGDERGDPERA
>NZ_CP052759.1|WP_049247811.1|1963662_1963998_-|tRNA-binding-protein
MDIIEWQDFERVELRVGTILSAAPNPKARKPAYVLEVDLGPLGLRTSSAQLTAHYQAEQLVGRQVLCVCNFAPKQIAGVRSEVLVSGVYDSEDKVVLAGFDKPLPNGARLA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP052759_2	2.1\|1955224\|52\|NZ_CP052759\|CRISPRCasFinder	1955224-1955275	52	NZ_CP042268	Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence	63791-63842	0	1.0

1. spacer 2.1|1955224|52|NZ_CP052759|CRISPRCasFinder matches to NZ_CP042268 (Pseudomonas aeruginosa strain HOU1 plasmid pHOU1-1, complete sequence) position: , mismatch: 0, identity: 1.0

tccggcgttattcgccctacgcggagggttcccagctttcgctccgccgttg	CRISPR spacer
tccggcgttattcgccctacgcggagggttcccagctttcgctccgccgttg	Protospacer
****************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

639973 : 722245

Pseudomonas_phage(37.5%)

holin,tail,tRNA,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003099590.1\|639973_640999_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.4e-108	58.1
WP_003085061.1\|641077_641647_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_003099587.1\|641730_642084_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_003142783.1\|642074_642617_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_003099584.1\|642589_643822_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	2.6e-77	43.1
WP_014602427.1\|643865_644372_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_003099581.1\|644465_646019_-	SpoVR family protein	NA	NA	NA	NA
WP_003099579.1\|646015_647287_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	4.2e-09	37.2
WP_003085078.1\|647387_649310_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_003099577.1\|649588_649921_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_003099572.1\|649964_650816_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2R4ALP3	Aeromonas_phage	2.4e-08	44.2
WP_003085085.1\|650815_651196_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_003085087.1\|651232_652039_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_031671281.1\|652154_653141_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_003109024.1\|653137_654430_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_003113209.1\|654410_657185_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_003099554.1\|657311_658328_+	phosphotransferase	NA	NA	NA	NA
WP_003117959.1\|658324_658999_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_003099547.1\|659000_659759_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_049247156.1\|659759_660821_-	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_003109040.1\|660972_663366_+	PAS domain S-box protein	NA	NA	NA	NA
WP_003085103.1\|663411_664044_+	response regulator transcription factor	NA	NA	NA	NA
WP_016252925.1\|664172_665207_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003085109.1\|665440_666550_+	polyamine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.8e-28	34.4
WP_033981633.1\|666605_667652_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003109044.1\|667766_669014_+	ABC transporter permease	NA	NA	NA	NA
WP_003099535.1\|669119_669950_+	ABC transporter permease	NA	NA	NA	NA
WP_003085122.1\|670073_670748_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_003099532.1\|670747_671566_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_033981631.1\|671638_673117_+	anthranilate synthase component I	NA	NA	NA	NA
WP_003113203.1\|673434_673749_-	transcription regulatory protein PrtN	NA	NA	NA	NA
WP_003113202.1\|673848_674619_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.4e-71	59.1
WP_003085132.1\|675075_675276_+	repressor PtrB	W6ATC1	Enterobacter_phage	3.7e-05	58.3
WP_003118907.1\|675323_675683_+	hypothetical protein	NA	NA	NA	NA
WP_073625183.1\|676046_676496_+\|holin	holin	B5TK61	Pseudomonas_phage	1.0e-26	54.2
WP_003113200.1\|676517_677033_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	4.1e-32	42.9
WP_003121844.1\|677029_677587_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	6.0e-45	70.3
WP_003085143.1\|677739_678066_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.2e-30	60.2
WP_003161928.1\|678062_678950_+	bacteriophage protein	S4TNY7	Salmonella_phage	4.1e-88	59.8
WP_003118911.1\|678942_679476_+\|tail	phage tail protein I	Q9ZXK7	Pseudomonas_virus	3.9e-62	64.6
WP_003161927.1\|679477_681583_+\|tail	phage tail protein	Q9ZXK6	Pseudomonas_virus	3.0e-222	52.7
WP_016852415.1\|681590_682031_+	hypothetical protein	NA	NA	NA	NA
WP_003121848.1\|682073_683234_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.2e-188	83.4
WP_003085175.1\|683246_683750_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	8.0e-65	73.5
WP_003085178.1\|683764_684109_+\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_033981629.1\|684278_686516_+\|tail	phage tail length tape measure protein	NA	NA	NA	NA
WP_033938814.1\|686525_687398_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.7e-75	51.7
WP_003101635.1\|687372_687579_+	hypothetical protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	2.3e-18	64.2
WP_033938816.1\|687636_688626_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.3e-106	55.8
WP_033938817.1\|688658_689288_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	1.0e-85	77.5
WP_033938825.1\|689284_689647_+	hypothetical protein	NA	NA	NA	NA
WP_031673821.1\|689643_689901_+	hypothetical protein	A0A125RNP3	Pseudomonas_phage	4.9e-18	64.6
WP_003113190.1\|690216_690711_+	hypothetical protein	A0A286S1Q8	Klebsiella_phage	1.4e-45	56.5
WP_003113189.1\|690722_691070_+\|tail	phage tail assembly chaperone family protein, TAC	NA	NA	NA	NA
WP_031629293.1\|691099_691354_+	hypothetical protein	A0A2H4PI34	Pseudomonas_phage	1.4e-09	38.4
WP_033981627.1\|691400_693239_+\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	3.4e-28	35.8
WP_003113186.1\|693231_693573_+\|tail	phage tail protein	Q6UAW6	Klebsiella_phage	1.4e-17	40.0
WP_003118922.1\|693580_694276_+\|tail	phage minor tail protein L	A0A1B0VNE0	Pseudomonas_phage	1.5e-69	50.2
WP_003129219.1\|694278_695049_+	C40 family peptidase	A0A2D1GNP8	Pseudomonas_phage	5.5e-81	55.6
WP_003113183.1\|695103_695706_+\|tail	tail assembly protein	A0A1V0E8A0	Vibrio_phage	2.2e-53	57.8
WP_033981625.1\|695764_699379_+\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	54.7
WP_009315197.1\|699665_700403_+	hypothetical protein	NA	NA	NA	NA
WP_009315198.1\|700426_701518_+	hypothetical protein	A0A0S2SY45	Pseudomonas_phage	2.1e-46	36.6
WP_023085656.1\|701517_701853_+	hypothetical protein	NA	NA	NA	NA
WP_003118928.1\|701833_702064_+	hypothetical protein	A0A1W6JT87	Pseudomonas_phage	6.7e-19	65.3
WP_009315200.1\|702159_703212_+	hypothetical protein	A0A0H5AXZ9	Pseudomonas_phage	2.7e-62	52.5
WP_003113177.1\|703211_703514_+	hypothetical protein	A0A0H5B141	Pseudomonas_phage	4.4e-34	71.0
WP_003118930.1\|703510_703741_+	hypothetical protein	C8ZKF3	Pseudomonas_phage	1.4e-24	71.6
WP_003117978.1\|704159_704765_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.1e-75	66.3
WP_003085203.1\|704766_705816_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.8e-111	57.8
WP_003085205.1\|705812_706649_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.1e-70	56.9
WP_003085214.1\|706710_707355_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA
WP_003085219.1\|707626_708049_+	OsmC family protein	NA	NA	NA	NA
WP_003101641.1\|708368_709163_+	adenosylmethionine decarboxylase	NA	NA	NA	NA
WP_003085224.1\|709217_709865_-	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA
WP_003085225.1\|709964_710303_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_003101642.1\|710381_711863_+	AAA family ATPase	U5XJW0	Phormidium_phage	6.7e-67	33.5
WP_003101644.1\|711902_712703_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003085240.1\|712763_713846_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_003085244.1\|713967_714936_-	nitronate monooxygenase	NA	NA	NA	NA
WP_003085245.1\|714952_715375_-	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA
WP_003101649.1\|715665_716700_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA
WP_049247264.1\|716699_717419_+	hypothetical protein	NA	NA	NA	NA
WP_003120826.1\|717419_717842_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA
WP_003085254.1\|717919_718270_+	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	3.0e-26	53.2
WP_004352281.1\|718323_719415_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_003142821.1\|719417_720761_-	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	3.0e-18	44.1
WP_003101660.1\|721045_722245_+\|tRNA	tyrosine--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

892656 : 908068

Pseudomonas_phage(94.44%)

integrase

attL 879761:879776|attR 903262:903277

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
879761:879776	attL	NA	NA	NA	NA
WP_003119024.1\|892656_893706_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	7.7e-102	53.9
WP_169433254.1\|893705_893975_-	hypothetical protein	NA	NA	NA	NA
WP_003119026.1\|893979_894669_-	hypothetical protein	A0A0A0YUE3	Pseudomonas_phage	4.7e-124	98.2
WP_003119027.1\|894665_894854_-	hypothetical protein	A0A0A0YQ21	Pseudomonas_phage	8.5e-28	98.4
WP_003119029.1\|895034_895370_-	hypothetical protein	A0A1W6JTA6	Pseudomonas_phage	4.5e-48	89.2
WP_033874406.1\|895372_895603_-	Arc family DNA-binding protein	A0A1W6JTB4	Pseudomonas_phage	4.5e-31	94.6
WP_003119030.1\|895677_896475_-	Bro-N domain-containing protein	A0A1W6JTB0	Pseudomonas_phage	1.1e-148	99.6
WP_042939429.1\|896485_896776_-	hypothetical protein	A0A1W6JTA7	Pseudomonas_phage	3.1e-45	96.9
WP_023101753.1\|896786_897170_-	helix-turn-helix transcriptional regulator	A0A1W6JTA9	Pseudomonas_phage	1.1e-58	98.4
WP_065427460.1\|897490_897850_-	hypothetical protein	NA	NA	NA	NA
WP_031642139.1\|897846_898140_-	hypothetical protein	NA	NA	NA	NA
WP_023101755.1\|898252_899026_-	helix-turn-helix transcriptional regulator	A0A2K8HKD5	Pseudomonas_phage	3.9e-79	77.7
WP_023465045.1\|899114_899453_+	hypothetical protein	A0A1W6JTD1	Pseudomonas_phage	7.9e-08	49.4
WP_023103748.1\|899449_899842_+	hypothetical protein	NA	NA	NA	NA
WP_010791993.1\|900147_900465_+	hypothetical protein	A0A1W6JTB5	Pseudomonas_phage	3.1e-38	77.1
WP_023093231.1\|900461_900734_+	hypothetical protein	A0A1W6JTC3	Pseudomonas_phage	7.4e-33	88.0
WP_033973150.1\|900730_901039_+	hypothetical protein	A0A1W6JTC0	Pseudomonas_phage	9.0e-43	87.3
WP_088376642.1\|901035_901344_+	hypothetical protein	NA	NA	NA	NA
WP_169433255.1\|901396_901609_+	hypothetical protein	A0A1W6JTF8	Pseudomonas_phage	2.1e-22	73.5
WP_015648201.1\|901605_902445_+	helix-turn-helix domain-containing protein	A0A1W6JTD5	Pseudomonas_phage	1.1e-146	94.3
WP_003085722.1\|902620_903241_+	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	2.9e-109	99.5
WP_169433144.1\|903237_904635_+	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	2.3e-263	98.9
903262:903277	attR	NA	NA	NA	NA
WP_169433145.1\|907258_908068_+	hypothetical protein	A0A0S2SY45	Pseudomonas_phage	4.9e-88	70.6

DBSCAN-SWA_3

1256050 : 1292103

uncultured_Caudovirales_phage(42.11%)

head,tRNA,terminase,portal,integrase,protease,holin

attL 1263726:1263742|attR 1277966:1277982

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003113794.1\|1256050_1258903_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.0e-148	37.0
WP_003112023.1\|1259023_1259392_-	hypothetical protein	NA	NA	NA	NA
WP_003100593.1\|1259403_1259832_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_049247286.1\|1259828_1261316_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	1.0e-51	36.1
WP_003129596.1\|1261652_1262465_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003122093.1\|1262548_1263472_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_003092864.1\|1263663_1264782_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
1263726:1263742	attL	NA	NA	NA	NA
WP_003092863.1\|1264774_1265842_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_023113282.1\|1265973_1266471_-	RDD family protein	NA	NA	NA	NA
WP_003092861.1\|1266600_1268181_+	EAL domain-containing protein	NA	NA	NA	NA
WP_033971096.1\|1268680_1269679_+\|integrase	site-specific integrase	A0A0A0YR56	Pseudomonas_phage	1.7e-151	96.5
WP_019726660.1\|1269747_1270059_+	outer membrane protein assembly factor BamE	J7HXI2	Pseudomonas_phage	1.8e-46	86.3
WP_033971086.1\|1270147_1270927_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_033971085.1\|1271240_1271543_-	hypothetical protein	A0A0A0YRS6	Pseudomonas_phage	1.6e-47	92.1
WP_033967225.1\|1271643_1271856_-	hypothetical protein	NA	NA	NA	NA
WP_169433149.1\|1271852_1273733_-	DNA cytosine methyltransferase	Q5QF27	Pseudomonas_virus	3.4e-132	43.0
WP_169433150.1\|1273729_1273882_-	hypothetical protein	NA	NA	NA	NA
WP_033971084.1\|1273890_1274625_-	hypothetical protein	NA	NA	NA	NA
WP_028680747.1\|1274691_1275501_-	DUF2303 family protein	A0A2R2Z323	Escherichia_phage	6.9e-50	42.0
WP_031632202.1\|1275546_1275894_-	hypothetical protein	NA	NA	NA	NA
WP_019726652.1\|1276111_1276348_-	pyocin activator PrtN family protein	A0A2H4J8B4	uncultured_Caudovirales_phage	6.1e-07	40.3
WP_028680745.1\|1276344_1276713_-	hypothetical protein	NA	NA	NA	NA
WP_028680744.1\|1276709_1276994_-	hypothetical protein	NA	NA	NA	NA
WP_028680743.1\|1277005_1277575_-	deoxynucleotide monophosphate kinase	A0A2H4J8A1	uncultured_Caudovirales_phage	8.0e-45	49.5
WP_028680742.1\|1277571_1277880_-	hypothetical protein	NA	NA	NA	NA
WP_078451259.1\|1278173_1278731_-	helix-turn-helix transcriptional regulator	A0A1W6JNY2	Morganella_phage	2.9e-23	44.0
1277966:1277982	attR	NA	NA	NA	NA
WP_028680740.1\|1278962_1279193_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_019726644.1\|1279382_1279586_-	hypothetical protein	NA	NA	NA	NA
WP_033980361.1\|1279792_1280293_+	hypothetical protein	A0A2H4JFM0	uncultured_Caudovirales_phage	8.0e-33	61.0
WP_019726642.1\|1280285_1280528_+	TraR/DksA C4-type zinc finger protein	Q9ZXI6	Pseudomonas_virus	2.7e-10	53.0
WP_033980362.1\|1280524_1283263_+	bifunctional DNA primase/polymerase	A0A2H4JF22	uncultured_Caudovirales_phage	0.0e+00	64.0
WP_124182786.1\|1283602_1284160_+	hypothetical protein	NA	NA	NA	NA
WP_004353017.1\|1284358_1284724_+	hypothetical protein	E5E3W4	Burkholderia_phage	1.0e-13	48.2
WP_025325111.1\|1284728_1285007_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_033867811.1\|1285009_1285747_+	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	2.0e-43	46.6
WP_023087718.1\|1286003_1286594_+	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	8.8e-47	54.5
WP_058168928.1\|1286597_1288613_+\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	6.6e-259	64.0
WP_169433151.1\|1288624_1288849_+	hypothetical protein	NA	NA	NA	NA
WP_169433152.1\|1288848_1290315_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	3.3e-175	66.0
WP_019726635.1\|1290298_1291471_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	5.1e-86	49.6
WP_073652324.1\|1291467_1292103_+\|head	head decoration protein	NA	NA	NA	NA

DBSCAN-SWA_4

1299074 : 1314622

Pseudomonas_phage(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019727251.1\|1299074_1302626_+	hypothetical protein	A0A0M4U447	Ralstonia_phage	5.0e-177	34.9
WP_016561962.1\|1302625_1303627_+	hypothetical protein	NA	NA	NA	NA
WP_031632192.1\|1303611_1304484_+	hypothetical protein	NA	NA	NA	NA
WP_169433155.1\|1304480_1306241_+	hypothetical protein	A0A2I7S8R8	Vibrio_phage	1.3e-24	23.7
WP_058133568.1\|1306240_1306477_+	hypothetical protein	NA	NA	NA	NA
WP_169433156.1\|1306723_1307353_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	7.4e-100	87.6
WP_134404657.1\|1307349_1307718_+	hypothetical protein	H2BDD6	Pseudomonas_virus	7.2e-31	64.8
WP_019726621.1\|1307714_1307975_+	hypothetical protein	B5WZU5	Pseudomonas_phage	6.9e-28	72.1
WP_134404660.1\|1308119_1308923_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	1.1e-100	65.0
WP_044069562.1\|1309272_1310175_-	hypothetical protein	NA	NA	NA	NA
WP_044069561.1\|1310174_1311422_-	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	8.1e-58	36.0
WP_128662525.1\|1311846_1312173_-	hypothetical protein	NA	NA	NA	NA
WP_003137849.1\|1312447_1313491_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003100607.1\|1313503_1314622_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	6.7e-96	49.9

DBSCAN-SWA_5

1533503 : 1542533

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003098558.1\|1533503_1534139_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_033981793.1\|1534184_1535078_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	3.0e-06	34.3
WP_003113871.1\|1535182_1536187_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	7.0e-36	37.3
WP_003092272.1\|1536614_1536938_-	ferredoxin family protein	NA	NA	NA	NA
WP_003113873.1\|1537004_1539572_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	3.2e-24	22.1
WP_012613731.1\|1539697_1540705_-	TolB family protein	NA	NA	NA	NA
WP_003092262.1\|1540852_1541359_+	CinA family protein	B5TK85	Pseudomonas_phage	8.1e-57	76.0
WP_003092260.1\|1541492_1542533_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.5e-113	59.5

DBSCAN-SWA_6

2422516 : 2473092

Pseudomonas_phage(71.15%)

tRNA,tail,terminase,integrase,holin

attL 2419808:2419825|attR 2451085:2451102

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2419808:2419825	attL	NA	NA	NA	NA
WP_003119890.1\|2422516_2423701_+	SpoIIE family protein phosphatase	Q56AR1	Bacillus_thuringiensis_phage	7.3e-08	31.9
WP_003104052.1\|2423697_2424180_+	STAS domain-containing protein	NA	NA	NA	NA
WP_003090868.1\|2424267_2425191_-	transaldolase	A0A1D8KMI9	Synechococcus_phage	6.5e-12	30.0
WP_023911957.1\|2425270_2426275_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_031628314.1\|2426378_2427485_+\|integrase	tyrosine-type recombinase/integrase	L7TP61	Pseudomonas_virus	3.5e-214	99.7
WP_003160559.1\|2427494_2427779_-	pyocin activator PrtN family protein	A0A2K8HN48	Pseudomonas_phage	8.0e-46	100.0
WP_034033528.1\|2427854_2428241_-	hypothetical protein	L7TJJ9	Pseudomonas_virus	2.3e-64	98.4
WP_049885749.1\|2428356_2428884_-	hypothetical protein	A0A0A0YRT2	Pseudomonas_phage	1.5e-34	76.6
WP_046720483.1\|2428880_2429264_-	hypothetical protein	NA	NA	NA	NA
WP_046720645.1\|2429265_2429829_-	hypothetical protein	Q5QF38	Pseudomonas_virus	6.7e-60	68.2
WP_169433162.1\|2430502_2431258_-	hypothetical protein	Q5QF32	Pseudomonas_virus	5.8e-144	96.8
WP_161113810.1\|2431254_2431896_-	hypothetical protein	Q5QF31	Pseudomonas_virus	1.1e-119	93.9
WP_169433163.1\|2432321_2434268_-	DNA cytosine methyltransferase	A0A1B0V7P0	Salmonella_phage	9.0e-96	39.4
WP_169433164.1\|2434264_2435650_-	site-specific DNA-methyltransferase	A0A2P1CD82	Mycobacterium_phage	3.2e-79	40.8
WP_033986498.1\|2436296_2436593_-	hypothetical protein	NA	NA	NA	NA
WP_169433165.1\|2436642_2438388_-	AAA family ATPase	H2BD46	Pseudomonas_phage	3.6e-290	94.1
WP_009314053.1\|2439334_2439535_-	hypothetical protein	J7I437	Pseudomonas_phage	1.9e-30	100.0
WP_102969935.1\|2439541_2440360_-	hypothetical protein	H2BD49	Pseudomonas_phage	8.0e-155	98.9
WP_169433166.1\|2440371_2441175_-	PD-(D/E)XK nuclease family protein	H2BD50	Pseudomonas_phage	1.2e-150	97.0
WP_003116743.1\|2441182_2441320_-	hypothetical protein	J7I432	Pseudomonas_phage	8.3e-17	100.0
WP_058134986.1\|2441303_2441495_-	hypothetical protein	J7HXB2	Pseudomonas_phage	2.1e-26	96.8
WP_010793151.1\|2441491_2441713_-	hypothetical protein	A0A127KNM7	Pseudomonas_phage	2.8e-30	95.7
WP_162532020.1\|2441696_2441852_-	hypothetical protein	A0A2K8HR67	Pseudomonas_phage	5.9e-11	93.5
WP_048764766.1\|2441848_2442352_-	hypothetical protein	J7I0S8	Pseudomonas_phage	3.8e-99	98.8
WP_010793149.1\|2442749_2442998_-	hypothetical protein	NA	NA	NA	NA
WP_169433167.1\|2443011_2443380_-	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	4.6e-62	98.4
WP_169433168.1\|2443412_2443676_-	hypothetical protein	H2BD57	Pseudomonas_phage	1.4e-44	97.7
WP_015975440.1\|2443830_2444043_-	hypothetical protein	A0A0U1VYM8	Pseudomonas_phage	4.0e-34	100.0
WP_169433169.1\|2444135_2445083_+	hypothetical protein	A0A1B5FPB0	Escherichia_phage	2.7e-13	33.9
WP_124078857.1\|2445157_2445469_+	hypothetical protein	A0A2H4J0J8	uncultured_Caudovirales_phage	9.1e-19	49.5
WP_128651291.1\|2445465_2445729_+	hypothetical protein	NA	NA	NA	NA
WP_169433258.1\|2446196_2446529_+	DUF1654 domain-containing protein	H2BD60	Pseudomonas_phage	7.7e-48	92.7
WP_071536922.1\|2446928_2447504_-	hypothetical protein	NA	NA	NA	NA
WP_071536923.1\|2447490_2447835_-	hypothetical protein	NA	NA	NA	NA
WP_169433170.1\|2447874_2448726_-	LexA family transcriptional regulator	A0A2D1GNH0	Pseudomonas_phage	2.9e-83	54.8
WP_003451709.1\|2448824_2449043_+	helix-turn-helix domain-containing protein	A0A2D1GND2	Pseudomonas_phage	2.9e-19	64.7
WP_016046669.1\|2449074_2449647_+	hypothetical protein	H2BD67	Pseudomonas_phage	9.3e-102	100.0
WP_034015940.1\|2449729_2450083_-	hypothetical protein	NA	NA	NA	NA
WP_034049853.1\|2450149_2451043_+	hypothetical protein	NA	NA	NA	NA
WP_003103373.1\|2451092_2451701_+	hypothetical protein	A0A2H4J6S4	uncultured_Caudovirales_phage	3.4e-41	43.9
2451085:2451102	attR	NA	NA	NA	NA
WP_169433171.1\|2451693_2452137_+	RusA family crossover junction endodeoxyribonuclease	J7I4J7	Pseudomonas_phage	4.0e-76	98.0
WP_088170865.1\|2452165_2452852_+	hypothetical protein	H2BD72	Pseudomonas_phage	2.2e-129	99.6
WP_010793141.1\|2452992_2453181_+	hypothetical protein	NA	NA	NA	NA
WP_169433172.1\|2453490_2453880_+	hypothetical protein	H2BD73	Pseudomonas_phage	3.8e-62	98.4
WP_003116758.1\|2453872_2454157_+\|holin	phage holin family protein	H2BD74	Pseudomonas_phage	1.2e-41	100.0
WP_073674929.1\|2454165_2454765_+\|terminase	terminase small subunit	H2BD75	Pseudomonas_phage	1.9e-44	59.2
WP_034029085.1\|2455710_2456367_+\|tail	phage tail protein	A0A0S2SYG8	Pseudomonas_phage	7.4e-111	95.9
WP_169433173.1\|2456376_2456694_+	hypothetical protein	A0A0S2SYT8	Pseudomonas_phage	5.2e-54	97.1
WP_033950162.1\|2456711_2457002_+	DUF1799 domain-containing protein	A0A0S2SY90	Pseudomonas_phage	6.5e-35	90.5
WP_169433174.1\|2457005_2460023_+\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	0.0e+00	93.7
WP_033946792.1\|2460025_2460364_+\|tail	phage tail protein	A0A2H4JI07	uncultured_Caudovirales_phage	5.2e-36	58.9
WP_169433175.1\|2460360_2461110_+\|tail	phage minor tail protein L	A0A0S2SY57	Pseudomonas_phage	3.3e-147	98.8
WP_169433176.1\|2461112_2461877_+	C40 family peptidase	A0A0S2SY75	Pseudomonas_phage	1.2e-147	99.6
WP_169433177.1\|2461948_2462530_+	SPOR domain-containing protein	A0A2H4J0E0	uncultured_Caudovirales_phage	2.2e-10	46.6
WP_169433178.1\|2462595_2463174_+\|tail	tail assembly protein	A0A0S2SYS2	Pseudomonas_phage	6.6e-87	87.6
WP_169433179.1\|2463194_2463638_-	hypothetical protein	NA	NA	NA	NA
WP_169433180.1\|2463783_2467446_+\|tail	phage tail protein	A0A0S2SYC5	Pseudomonas_phage	0.0e+00	86.5
WP_010793120.1\|2468425_2469235_+	hypothetical protein	A0A0S2SY45	Pseudomonas_phage	7.5e-89	71.3
WP_043155338.1\|2469234_2469537_+	hypothetical protein	A0A0S2SY61	Pseudomonas_phage	8.8e-43	87.0
WP_121348604.1\|2469533_2469773_+	hypothetical protein	A0A0S3UFY6	Pseudomonas_phage	2.0e-34	97.3
WP_162978862.1\|2469835_2471479_-	hypothetical protein	NA	NA	NA	NA
WP_169433181.1\|2471538_2472168_+	glycoside hydrolase family 19 protein	A0A125RNP1	Pseudomonas_phage	5.4e-111	95.2
WP_003160544.1\|2472164_2472533_+	hypothetical protein	H2BDD6	Pseudomonas_virus	1.0e-40	78.7
WP_003160543.1\|2472529_2472793_+	hypothetical protein	A0A0U4B0B7	Pseudomonas_phage	1.3e-37	98.8
WP_003160542.1\|2472828_2473092_+	hypothetical protein	Q9MC87	Pseudomonas_phage	9.0e-44	94.3

DBSCAN-SWA_7

2677170 : 2684063

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003097631.1\|2677170_2678451_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.4
WP_003113366.1\|2678452_2679850_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_003097628.1\|2679854_2680829_-	glutathione S-transferase family protein	NA	NA	NA	NA
WP_003097625.1\|2680916_2681900_-	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	3.5e-141	74.0
WP_003090393.1\|2681896_2682232_-	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.3e-38	69.4
WP_003090391.1\|2682228_2682534_-	sulfurtransferase complex subunit TusB	NA	NA	NA	NA
WP_012613994.1\|2682533_2682893_-	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.1e-34	61.7
WP_003090387.1\|2682889_2683285_-	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-47	72.1
WP_003090386.1\|2683394_2684063_-	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-90	82.1

DBSCAN-SWA_8

4785479 : 4855307

Acidithiobacillus_phage(45.0%)

head,tRNA,tail,terminase,capsid,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012479850.1\|4785479_4785743_+	hypothetical protein	K4I3X3	Acidithiobacillus_phage	2.3e-23	60.9
WP_049246972.1\|4785754_4786231_+	hypothetical protein	K4HZ96	Acidithiobacillus_phage	3.0e-53	65.8
WP_049246975.1\|4786236_4786998_+	antirepressor	K4I1D2	Acidithiobacillus_phage	2.3e-87	68.1
WP_169433210.1\|4786997_4787990_+	AAA family ATPase	K4I3Y2	Acidithiobacillus_phage	9.6e-78	65.1
WP_169433211.1\|4787986_4789249_+	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	6.4e-220	88.3
WP_169433212.1\|4789212_4789581_-	hypothetical protein	K4ICP1	Acidithiobacillus_phage	9.7e-52	80.8
WP_169433263.1\|4789686_4789956_-	hypothetical protein	K4HZA7	Acidithiobacillus_phage	3.7e-16	54.5
WP_169433213.1\|4790056_4790578_-	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	7.6e-34	78.8
WP_169433214.1\|4790673_4790880_-	hypothetical protein	NA	NA	NA	NA
WP_169433264.1\|4790986_4791532_+	elements of external origin	A0A2H4JCL4	uncultured_Caudovirales_phage	4.0e-54	66.9
WP_169433215.1\|4791531_4793493_+\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	0.0e+00	89.8
WP_169433216.1\|4793921_4794980_+	hypothetical protein	NA	NA	NA	NA
WP_169433217.1\|4794976_4796560_+	hypothetical protein	NA	NA	NA	NA
WP_169433218.1\|4796562_4797351_+	DUF2163 domain-containing protein	A0A0S0MV27	Pseudomonas_phage	2.2e-29	33.9
WP_045667461.1\|4797369_4797597_+	hypothetical protein	A0A2K8HRJ9	Pseudomonas_phage	7.4e-10	63.6
WP_045667462.1\|4797593_4797815_+	hypothetical protein	A0A2K8I9R5	Pseudomonas_phage	1.9e-10	55.9
WP_169433219.1\|4797814_4800088_+\|tail	phage tail protein	A0A2K8HP68	Pseudomonas_phage	1.4e-129	38.5
WP_169433220.1\|4800087_4800696_+	hypothetical protein	NA	NA	NA	NA
WP_169433221.1\|4800699_4801050_+	DUF2793 domain-containing protein	A0A1X9IAR6	Xanthomonas_phage	1.3e-37	64.7
WP_169433222.1\|4801113_4801416_+	hypothetical protein	K4I011	Acidithiobacillus_phage	1.6e-23	67.9
WP_045667467.1\|4801412_4801640_+	hypothetical protein	NA	NA	NA	NA
WP_169433223.1\|4801636_4802146_+	lysozyme	A0A0A8KXN5	Burkholderia_phage	1.1e-18	39.5
WP_169433224.1\|4802142_4802640_+	hypothetical protein	A0A1S5NQ26	Burkholderia_phage	2.9e-27	66.7
WP_169433225.1\|4803013_4804723_+	hypothetical protein	NA	NA	NA	NA
WP_169433265.1\|4804826_4805744_+	4Fe-4S binding protein	NA	NA	NA	NA
WP_169433226.1\|4805751_4806612_-	site-specific DNA-methyltransferase	R4THJ7	Phaeocystis_globosa_virus	4.2e-45	37.2
WP_169433227.1\|4806613_4807597_-	site-specific DNA-methyltransferase	M4T1C0	Cyanophage	1.4e-09	30.2
WP_169433228.1\|4807611_4807905_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_169433229.1\|4807934_4809797_+	AAA family ATPase	K4I1H4	Acidithiobacillus_phage	6.7e-16	27.3
WP_169433230.1\|4809850_4811140_+	hypothetical protein	NA	NA	NA	NA
WP_169433266.1\|4811422_4812061_+	hypothetical protein	NA	NA	NA	NA
WP_049246949.1\|4812503_4812977_-	hypothetical protein	K4I1C7	Acidithiobacillus_phage	1.6e-46	61.0
WP_049246951.1\|4812973_4813345_-	hypothetical protein	K4HZX2	Acidithiobacillus_phage	2.3e-45	71.2
WP_049246952.1\|4813344_4814724_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	1.4e-236	88.7
WP_049246955.1\|4814720_4815170_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	5.7e-70	87.2
WP_049246957.1\|4815169_4815373_-	hypothetical protein	K4HZ94	Acidithiobacillus_phage	5.8e-14	70.1
WP_049246960.1\|4815544_4815823_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_049246962.1\|4815823_4816636_+	hypothetical protein	NA	NA	NA	NA
WP_049246964.1\|4816733_4818158_+	hypothetical protein	NA	NA	NA	NA
WP_049246967.1\|4818171_4819101_+	hypothetical protein	NA	NA	NA	NA
WP_012479850.1\|4819195_4819459_+	hypothetical protein	K4I3X3	Acidithiobacillus_phage	2.3e-23	60.9
WP_049246972.1\|4819470_4819947_+	hypothetical protein	K4HZ96	Acidithiobacillus_phage	3.0e-53	65.8
WP_049246975.1\|4819952_4820714_+	antirepressor	K4I1D2	Acidithiobacillus_phage	2.3e-87	68.1
WP_049246977.1\|4820713_4821574_+	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	4.1e-109	70.0
WP_049246979.1\|4821579_4822227_+	hypothetical protein	K4ICM8	Acidithiobacillus_phage	1.4e-82	73.4
WP_049246981.1\|4822236_4822737_+	hypothetical protein	K4I3X7	Acidithiobacillus_phage	1.9e-66	73.0
WP_049246983.1\|4822733_4823471_+\|tRNA	isoleucyl-tRNA synthetase	K4HZA0	Acidithiobacillus_phage	1.0e-108	75.0
WP_049246986.1\|4823467_4823722_+	hypothetical protein	K4I1D6	Acidithiobacillus_phage	1.6e-21	67.5
WP_049246988.1\|4823718_4826016_+	hypothetical protein	K4HZY1	Acidithiobacillus_phage	0.0e+00	72.2
WP_049246990.1\|4826145_4826622_+	hypothetical protein	K4ICN3	Acidithiobacillus_phage	7.1e-63	76.2
WP_049246993.1\|4826623_4826833_+	hypothetical protein	NA	NA	NA	NA
WP_049246996.1\|4826825_4827254_+	hypothetical protein	NA	NA	NA	NA
WP_169433231.1\|4827598_4829035_+	site-specific DNA-methyltransferase	K4I3Y2	Acidithiobacillus_phage	4.3e-164	61.5
WP_169433232.1\|4829031_4830267_+	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	2.8e-212	87.8
WP_049247001.1\|4830226_4830451_-	hypothetical protein	NA	NA	NA	NA
WP_049247004.1\|4830450_4830816_-	hypothetical protein	A0A2H4JI44	uncultured_Caudovirales_phage	1.3e-53	79.3
WP_049247006.1\|4830913_4831201_-	hypothetical protein	K4HZA7	Acidithiobacillus_phage	1.3e-06	35.6
WP_049247008.1\|4831297_4831894_-	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	1.5e-33	77.5
WP_049247010.1\|4832001_4832208_-	hypothetical protein	NA	NA	NA	NA
WP_049247013.1\|4832318_4832885_+	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	1.5e-51	62.8
WP_049247014.1\|4832887_4834837_+\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	0.0e+00	88.5
WP_049247016.1\|4834854_4835346_+	hypothetical protein	A0A0F6WCR7	Sinorhizobium_phage	3.8e-27	49.7
WP_049247018.1\|4835345_4835738_+	hypothetical protein	NA	NA	NA	NA
WP_049247020.1\|4835737_4835959_+	hypothetical protein	A0A2H4JCJ9	uncultured_Caudovirales_phage	2.0e-12	57.5
WP_049247026.1\|4835961_4837470_+\|portal	phage portal protein	A0A1B2LRR5	Wolbachia_phage	1.7e-150	57.0
WP_049247030.1\|4837471_4838806_+	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	3.1e-63	43.9
WP_049247031.1\|4838809_4839187_+\|head	head decoration protein	A0A1B2LRT0	Wolbachia_phage	1.6e-25	52.8
WP_049247033.1\|4839261_4840284_+\|capsid	major capsid protein	Q9JMM2	Wolbachia_phage	4.2e-121	63.5
WP_049247034.1\|4840291_4840570_+	hypothetical protein	NA	NA	NA	NA
WP_049247036.1\|4840580_4841006_+	hypothetical protein	F4YCS3	Synechococcus_phage	6.9e-09	30.2
WP_049247037.1\|4841013_4841217_+	hypothetical protein	NA	NA	NA	NA
WP_049247038.1\|4841219_4841972_+	hypothetical protein	A0A2D2W2E0	Stenotrophomonas_phage	3.5e-56	49.2
WP_049247039.1\|4841983_4842397_+	hypothetical protein	NA	NA	NA	NA
WP_124086481.1\|4842393_4842597_+	hypothetical protein	NA	NA	NA	NA
WP_049247040.1\|4842586_4843234_+	hypothetical protein	NA	NA	NA	NA
WP_049247041.1\|4843237_4846633_+	tape measure protein	A0A125RN77	Pseudomonas_phage	1.6e-31	32.6
WP_049247043.1\|4846650_4847709_+	hypothetical protein	NA	NA	NA	NA
WP_049247045.1\|4847705_4849268_+	hypothetical protein	NA	NA	NA	NA
WP_049247046.1\|4849270_4850059_+	DUF2163 domain-containing protein	A0A0S0MV27	Pseudomonas_phage	2.3e-26	30.9
WP_031688351.1\|4850077_4850305_+	hypothetical protein	A0A2K8HRJ9	Pseudomonas_phage	7.4e-10	63.6
WP_049247047.1\|4850301_4850508_+	hypothetical protein	A0A2D0W982	Bordetella_phage	3.9e-10	60.7
WP_049247050.1\|4850507_4852781_+\|tail	tail assembly protein	A0A1L2C8W7	Pseudomonas_phage	3.0e-135	38.8
WP_049247051.1\|4852780_4853377_+	hypothetical protein	NA	NA	NA	NA
WP_049247052.1\|4853379_4853730_+	DUF2793 domain-containing protein	A0A1X9IAR6	Xanthomonas_phage	1.7e-37	63.8
WP_049247054.1\|4853795_4854086_+	hypothetical protein	K4I011	Acidithiobacillus_phage	3.2e-26	68.9
WP_049247055.1\|4854082_4854304_+	hypothetical protein	NA	NA	NA	NA
WP_049247056.1\|4854300_4854813_+	lysozyme	A0A0A8KXN5	Burkholderia_phage	2.3e-19	41.8
WP_049247057.1\|4854809_4855307_+	hypothetical protein	A4PE37	Ralstonia_virus	7.2e-26	50.3

DBSCAN-SWA_9

4978867 : 5022528

Pseudomonas_phage(92.31%)

lysis,transposase,integrase,terminase

attL 4968682:4968699|attR 5018578:5018595

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4968682:4968699	attL	NA	NA	NA	NA
WP_119565474.1\|4978867_4979092_-	hypothetical protein	A0A0A1IX79	Pseudomonas_phage	2.3e-32	95.9
WP_021204930.1\|4979170_4979458_-	hypothetical protein	B7SE14	Pseudomonas_virus	7.3e-47	98.9
WP_169433234.1\|4979454_4980603_-	DUF2793 domain-containing protein	B7SE13	Pseudomonas_virus	1.5e-191	85.6
WP_033961512.1\|4980599_4982810_-	bacteriophage protein	Q5ZQV9	Pseudomonas_phage	0.0e+00	98.5
WP_078452072.1\|4982796_4983027_-	hypothetical protein	Q5ZQW0	Pseudomonas_phage	4.2e-37	98.7
WP_003094285.1\|4983023_4983254_-	hypothetical protein	Q5ZQW1	Pseudomonas_phage	1.2e-36	100.0
WP_003156591.1\|4983263_4984082_-	DUF2163 domain-containing protein	Q5ZQW2	Pseudomonas_phage	2.0e-166	100.0
WP_119565471.1\|4984068_4985775_-	hypothetical protein	Q5ZQW3	Pseudomonas_phage	0.0e+00	97.5
WP_039843240.1\|4985774_4986698_-	hypothetical protein	B7SDV6	Pseudomonas_virus	9.2e-184	97.1
WP_119565470.1\|4986699_4987656_-	hypothetical protein	A0A1C6ZDR1	Pseudomonas_phage	1.5e-184	94.7
WP_119565469.1\|4987655_4990955_-	tape measure protein	Q5ZQW6	Pseudomonas_phage	0.0e+00	94.2
WP_021204938.1\|4991035_4991830_-	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	1.3e-154	99.2
WP_152959602.1\|4991799_4991994_-	Com family DNA-binding transcriptional regulator	Q5ZQW8	Pseudomonas_phage	7.9e-29	98.4
WP_021204939.1\|4992120_4992273_-	hypothetical protein	Q5ZQX0	Pseudomonas_phage	9.6e-14	90.7
WP_021204940.1\|4992269_4992785_-	hypothetical protein	Q5ZQX1	Pseudomonas_phage	7.9e-60	72.4
WP_021204941.1\|4992787_4993528_-	hypothetical protein	J9SVZ4	Pseudomonas_phage	4.6e-93	68.3
WP_021204942.1\|4993532_4993727_-	hypothetical protein	J9RWG5	Pseudomonas_phage	1.1e-06	54.4
WP_021204943.1\|4993723_4994188_-	hypothetical protein	Q5ZQX4	Pseudomonas_phage	4.5e-78	89.6
WP_021204944.1\|4994189_4994708_-	DUF1320 domain-containing protein	Q5ZQX5	Pseudomonas_phage	6.5e-94	98.8
WP_021204945.1\|4994709_4994997_-	hypothetical protein	A0A0S4L5D5	Pseudomonas_phage	1.2e-25	64.8
WP_021204946.1\|4994996_4995632_-	hypothetical protein	Q5ZQX6	Pseudomonas_phage	2.2e-96	90.0
WP_021204947.1\|4995644_4996574_-	hypothetical protein	Q5ZQX7	Pseudomonas_phage	4.2e-176	98.4
WP_021204948.1\|4996585_4996963_-	DUF2190 family protein	Q5ZQX8	Pseudomonas_phage	1.0e-56	98.4
WP_021204949.1\|4996966_4998148_-	hypothetical protein	Q5ZQY0	Pseudomonas_phage	1.1e-168	98.0
WP_015975387.1\|4998437_4999010_-	phage virion morphogenesis protein	Q5ZQY1	Pseudomonas_phage	4.8e-106	100.0
WP_021204950.1\|4999133_5000390_-	hypothetical protein	Q5ZQY3	Pseudomonas_phage	8.6e-241	99.3
WP_015975384.1\|5000389_5001856_-	DUF935 family protein	Q5ZQY4	Pseudomonas_phage	1.0e-285	100.0
WP_015975383.1\|5001855_5003316_-\|terminase	large terminase subunit	Q5ZQY5	Pseudomonas_phage	1.8e-290	100.0
WP_021204951.1\|5003315_5003888_-	DUF3486 family protein	Q5ZQY6	Pseudomonas_phage	6.1e-93	100.0
WP_015975381.1\|5003894_5004203_-	hypothetical protein	Q5ZQY7	Pseudomonas_phage	2.3e-54	100.0
WP_015975380.1\|5004192_5004582_-	hypothetical protein	Q5ZQY8	Pseudomonas_phage	7.6e-63	100.0
WP_086223083.1\|5004585_5005197_-\|lysis	lysis protein	Q5ZQY9	Pseudomonas_phage	3.4e-102	99.0
WP_119565468.1\|5005392_5006022_-	transglycosylase SLT domain-containing protein	J9SH25	Pseudomonas_phage	3.7e-120	99.0
WP_162836233.1\|5006018_5006177_-	hypothetical protein	J9SNF4	Pseudomonas_phage	1.3e-21	98.1
WP_003138152.1\|5006179_5006437_-	membrane protein	J9STQ9	Pseudomonas_phage	5.6e-38	100.0
WP_124084312.1\|5006772_5007216_-	hypothetical protein	NA	NA	NA	NA
WP_169433235.1\|5007740_5008001_-	hypothetical protein	J9SH16	Pseudomonas_phage	9.0e-12	80.4
WP_003142304.1\|5008185_5008416_+	DNA-binding protein	J9RW65	Pseudomonas_phage	2.5e-37	100.0
WP_015649394.1\|5008700_5008925_-	hypothetical protein	NA	NA	NA	NA
WP_033967144.1\|5009048_5009537_+	hypothetical protein	J9SHM0	Pseudomonas_phage	2.2e-91	99.4
WP_003142306.1\|5009529_5009790_+	hypothetical protein	J9RWD0	Pseudomonas_phage	1.5e-38	95.3
WP_034019336.1\|5009786_5010101_+	hypothetical protein	J9SUN0	Pseudomonas_phage	1.9e-48	97.1
WP_053814044.1\|5010110_5011085_+	hypothetical protein	J9RW58	Pseudomonas_phage	4.7e-154	98.4
WP_119565465.1\|5011088_5012873_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	J9SGQ3	Pseudomonas_phage	0.0e+00	98.5
WP_119565464.1\|5012872_5014039_+	AAA family ATPase	J9SNL1	Pseudomonas_phage	1.5e-215	99.2
WP_053813821.1\|5014040_5014382_+	hypothetical protein	J9RWC3	Pseudomonas_phage	3.3e-54	96.5
WP_039843387.1\|5014378_5014663_+	hypothetical protein	J9SGZ7	Pseudomonas_phage	1.1e-39	89.4
WP_033938129.1\|5014662_5014917_+	hypothetical protein	NA	NA	NA	NA
WP_015649401.1\|5015063_5015687_+	DUF3164 family protein	Q5ZR10	Pseudomonas_phage	1.0e-109	99.5
WP_003094188.1\|5015688_5016378_+	DUF2786 domain-containing protein	Q5ZR11	Pseudomonas_phage	1.3e-126	100.0
WP_003127807.1\|5016379_5016571_+	hypothetical protein	J9SNB0	Pseudomonas_phage	8.6e-28	100.0
WP_021204961.1\|5016570_5017038_+	hypothetical protein	A0A0S4L0B8	Pseudomonas_phage	6.1e-59	100.0
WP_021204962.1\|5017024_5017588_+	regulatory protein GemA	A0A0S4L518	Pseudomonas_phage	1.9e-99	100.0
WP_015975359.1\|5017590_5017953_+	transcriptional regulator	Q5ZR15	Pseudomonas_phage	2.3e-61	100.0
WP_003116513.1\|5018162_5019059_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA
5018578:5018595	attR	NA	NA	NA	NA
WP_003085490.1\|5019115_5019760_+	two pore domain potassium channel family protein	NA	NA	NA	NA
WP_003110820.1\|5019875_5020517_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_019372103.1\|5020551_5022528_-	alkyl/aryl-sulfatase	M1I0S7	Paramecium_bursaria_Chlorella_virus	8.9e-160	44.6

Anti-CRISPR protein detection

Acr_ID: NZ_CP052759.1|WP_003158163.1|5458933_5459308_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP052759.1|WP_031635407.1|5461049_5461442_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP052759.1|WP_003158159.1|5461460_5461784_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP052759.1|WP_003158163.1|5458933_5459308_+|hypothetical-protein

5458933_5459308_+

124 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|27	1.0	1	1.0

NZ_CP052759.1|WP_031635407.1|5461049_5461442_+|hypothetical-protein

5461049_5461442_+

130 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|3	0.4251968503937008	0.9307692307692308	0.8785714285714286

NZ_CP052759.1|WP_003158159.1|5461460_5461784_+|hypothetical-protein

5461460_5461784_+

107 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|15	0.6213592233009708	0.9719626168224299	0.99

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP052760

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP052759

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information