CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048834	Starkeya sp. ORNL1 chromosome, complete genome	4 crisprs	csa3,cas3,PD-DExK,DEDDh	0	0	2	0

1. NZ_CP048834

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048834_1

• CRISPR_ID: NZ_CP048834_1
• CRISPR_location: 1082864-1082958
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048834_1

Consensus_repeat	Method
CCCAGCCGGGCGGGCAACGGTCG	CRISPRCasFinder

spacers of NZ_CP048834_1

>1.1|1082887|49|NZ_CP048834|CRISPRCasFinder
TCGCCGGGCTTCGGACGGAAGCCGGGGGTGCAGGAATCGCCCTGCCTCA

CRISPR arrays and Neighbor proteins around NZ_CP048834_1

CRISPR arrays

The CRISPR arrays of NZ_CP048834_1

>merge|NZ_CP048834|1|1082864-1082958|CRISPRCasFinder
CCCAGCCGGGCGGGCAACGGTCGTCGCCGGGCTTCGGACGGAAGCCGGGGGTGCAGGAATCGCCCTGCCTCACCCAGCCGGGCGGGCAGCGGTCG

>NZ_CP048834|1|1|1082864-1082958|CRISPRCasFinder
CCCAGCCGGGCGGGCAACGGTCG	TCGCCGGGCTTCGGACGGAAGCCGGGGGTGCAGGAATCGCCCTGCCTCA
CCCAGCCGGGCGGGCAGCGGTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048834.1|WP_170017920.1|1069964_1071128_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170010520.1|1077985_1078333_-|hypothetical-protein	unknown	unknown	gnl|CDD|226461
NZ_CP048834.1|WP_170010535.1|1089503_1091243_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|143636
NZ_CP048834.1|WP_170010545.1|1096400_1097132_-|urease-accessory-protein-UreE	unknown	unknown	gnl|CDD|238320
NZ_CP048834.1|WP_170010527.1|1085378_1086119_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|226674
NZ_CP048834.1|WP_170010539.1|1092471_1094790_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|227334
NZ_CP048834.1|WP_170010543.1|1095706_1096465_-|urease-accessory-protein-UreF	unknown	unknown	gnl|CDD|223900
NZ_CP048834.1|WP_170010514.1|1073597_1074788_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|226960
NZ_CP048834.1|WP_170010508.1|1069520_1069958_+|PIN-domain-containing-protein	unknown	unknown	gnl|CDD|350313
NZ_CP048834.1|WP_170010510.1|1071402_1072200_-|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224051
NZ_CP048834.1|WP_170010524.1|1079241_1080999_-|glycosyltransferase-family-39-protein	unknown	unknown	gnl|CDD|224720
NZ_CP048834.1|WP_170010529.1|1086157_1087144_-|aldo/keto-reductase	unknown	unknown	gnl|CDD|381304
NZ_CP048834.1|WP_170010518.1|1076654_1077860_+|cystathionine-beta-lyase	unknown	unknown	gnl|CDD|235657
NZ_CP048834.1|WP_170010516.1|1074898_1075915_-|amino-acid-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270410
NZ_CP048834.1|WP_170010512.1|1072216_1073587_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NZ_CP048834.1|WP_170010533.1|1088568_1089462_+|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176163
NZ_CP048834.1|WP_170010522.1|1078322_1079105_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133022
NZ_CP048834.1|WP_170010541.1|1095038_1095689_-|urease-accessory-protein-UreG	unknown	unknown	gnl|CDD|349776
NZ_CP048834.1|WP_170010537.1|1091289_1092270_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380548
NZ_CP048834.1|WP_170010531.1|1087183_1088392_-|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl|CDD|380361

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048834.1|WP_170010545.1|1096400_1097132_-|urease-accessory-protein-UreE	gnl|CDD|238320	cd00571, UreE, UreE urease accessory protein. UreE is a metallochaperone assisting the insertion of a Ni2+ ion in the active site of urease, an important step in the in vivo assembly of urease, an enzyme that hydrolyses urea into ammonia and carbamic acid. The C-terminal region of UreE contains a histidine rich nickel binding site.	7.16903e-33
NZ_CP048834.1|WP_170010520.1|1077985_1078333_-|hypothetical-protein	gnl|CDD|226461	COG3952, COG3952, Predicted membrane protein [Function unknown].	4.00255e-33
NZ_CP048834.1|WP_170010535.1|1089503_1091243_-|HAMP-domain-containing-protein	gnl|CDD|143636	cd07302, CHD, cyclase homology domain. Catalytic domains of the mononucleotidyl cyclases (MNC's), also called cyclase homology domains (CHDs), are part of the class III nucleotidyl cyclases. This class includes eukaryotic and prokaryotic adenylate cyclases (AC's) and guanylate cyclases (GC's). They seem to share a common catalytic mechanism in their requirement for two magnesium ions to bind the polyphosphate moiety of the nucleotide.	8.30059e-46
NZ_CP048834.1|WP_170010531.1|1087183_1088392_-|carboxymuconolactone-decarboxylase-family-protein	gnl|CDD|380361	cd02233, cupin_HNL-like, Granulicella tundricola hydroxynitrile lyase (GtHNL) and related proteins, cupin domain. This family includes archaeal, eukaryotic, and bacterial proteins homologous to hydroxynitrile lyase from Granulicella tundricola (GtHNL), a novel class of HNLs that does not show any sequence or structural similarity to any other HNL and does not contain conserved motifs typical of HNLs. HNLs comprise a diverse group of enzymes that vary in terms of their substrate specificity, enantioselectivity and the need for a co-factor. In plants, they catalyze the reversible cleavage of cyanohydrins, yielding HCN and aldehydes or ketones. Also included in this family is TM1010 from Thermotoga maritima, a protein of unknown function. Some but not all members of this family have N- or C-terminal carboxymuconolactone decarboxylase domains in addition to the cupin domain. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.07699e-59
NZ_CP048834.1|WP_170010527.1|1085378_1086119_-|SDR-family-oxidoreductase	gnl|CDD|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	1.61657e-102
NZ_CP048834.1|WP_170010539.1|1092471_1094790_-|EAL-domain-containing-protein	gnl|CDD|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	1.33097e-103
NZ_CP048834.1|WP_170010543.1|1095706_1096465_-|urease-accessory-protein-UreF	gnl|CDD|223900	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones].	1.6542e-59
NZ_CP048834.1|WP_170010514.1|1073597_1074788_-|amino-acid-ABC-transporter-permease	gnl|CDD|226960	COG4597, BatB, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	8.53096e-171
NZ_CP048834.1|WP_170010508.1|1069520_1069958_+|PIN-domain-containing-protein	gnl|CDD|350313	cd18746, PIN_VapC4-5_FitB-like, uncharacterized subgroup of the PIN_VapC4-5_FitB-like subfamily of the PIN domain superfamily. The PIN_VapC4-5_FitB-like subfamily includes the Virulence associated protein C (VapC)-like PIN (PilT N terminus) domain of Mycobacterium tuberculosis VapC4 and VapC5 ribonuclease toxins of the VapBC toxin/antitoxin (TA) system, and Neisseria gonorrhoeae FitB toxin of the FitAB TA system. This subfamily belongs to the VapC-like family of the PIN domain nuclease superfamily. VapC is the PIN-domain ribonuclease toxin from prokaryotic VapBC toxin-antitoxin (TA) systems. VapB is a transcription factor-like protein antitoxin acting as an inhibitor. Other members of the VapC-like nuclease family include eukaryotic ribonucleases such as Smg6, ribosome assembly factor NOB1, exosome subunit Rrp44 endoribonuclease and rRNA-processing protein Fcf1. The structural properties of the PIN (PilT N terminus) domain indicate its active center, consisting of three highly conserved catalytic residues which coordinate metal ions, in some members, additional metal coordinating residues can be found. Some members of the superfamily lack several of these key catalytic residues. The PIN active site is geometrically similar in the active center of structure-specific 5' nucleases, PIN-domain ribonucleases of eukaryotic rRNA editing proteins, and bacterial toxins of toxin-antitoxin (TA) operons.	3.1979e-39
NZ_CP048834.1|WP_170010529.1|1086157_1087144_-|aldo/keto-reductase	gnl|CDD|381304	cd19078, AKR_AKR13C1_2, AKR13C family of aldo-keto reductase (AKR). The AKR13C family includes Helicobacter pyroli aldehyde reductase (AKR13C1) and Thermotoga maritima aldo-keto reductase (AKR13C2). Aldehyde reductase (EC 1.1.1.21), also called aldose reductase, is a cytosolic NADPH-dependent oxidoreductase that catalyzes the reduction of a variety of aldehydes and carbonyls, including monosaccharides.	0
NZ_CP048834.1|WP_170010524.1|1079241_1080999_-|glycosyltransferase-family-39-protein	gnl|CDD|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	1.19593e-46
NZ_CP048834.1|WP_170010518.1|1076654_1077860_+|cystathionine-beta-lyase	gnl|CDD|235657	PRK05967, PRK05967, cystathionine beta-lyase; Provisional.	7.22653e-173
NZ_CP048834.1|WP_170010516.1|1074898_1075915_-|amino-acid-ABC-transporter-substrate-binding-protein	gnl|CDD|270410	cd13692, PBP2_BztA, Substrate bindng domain of ABC glutamate/glutamine/aspartate/asparagine transporter; the type 2 periplasmic binding protein fold. BztA is the periplamic-binding protein component of ABC transporter specific for carboxylic amino acids, glutamine and asparagine. The BZtA domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.31066e-140
NZ_CP048834.1|WP_170010512.1|1072216_1073587_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	7.90251e-62
NZ_CP048834.1|WP_170010533.1|1088568_1089462_+|LysR-family-transcriptional-regulator	gnl|CDD|176163	cd08474, PBP2_CrgA_like_5, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold. This CD represents the substrate binding domain of an uncharacterized LysR-type transcriptional regulator (LTTR) CrgA-like 5. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.79038e-113
NZ_CP048834.1|WP_170010522.1|1078322_1079105_-|glycosyltransferase-family-2-protein	gnl|CDD|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	3.13506e-44
NZ_CP048834.1|WP_170010541.1|1095038_1095689_-|urease-accessory-protein-UreG	gnl|CDD|349776	cd05540, UreG, urease accessory protein UreG. UreG is one of the four accessory proteins of urease. Urease is an enzyme which catalyzes the decomposition of urea to form ammonia and carbon dioxide. Bacterial urease is a trimer of three subunits which are encoded by genes ureA, ureB, and ureC. Up to four accessory proteins (ureD, ureE, ureF, and ureG) are required for urease catalytical function. UreG may play an important role in nickel incorporation of the urease metallocenter. UreG is a member of the Fer4_NifH superfamily which contains an ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.	7.92786e-130
NZ_CP048834.1|WP_170010537.1|1091289_1092270_-|ABC-transporter-substrate-binding-protein	gnl|CDD|380548	cd06325, PBP1_ABC_unchar_transporter, type 1 periplasmic ligand-binding domain of uncharacterized ABC-type transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This group includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type transport systems that are predicted to be involved in the uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); its ligand specificity has not been determined experimentally.	5.08876e-99
NZ_CP048834.1|WP_170010510.1|1071402_1072200_-|amino-acid-ABC-transporter-ATP-binding-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.9645e-163

Protein sequences

>NZ_CP048834.1|WP_170010524.1|1079241_1080999_-|glycosyltransferase-family-39-protein
MVHTEDGLKTTRPLRVDEYGRRIVHWIAGLFDWATRSNGRAVAFLLALCAVSLLPGFFFIPVVDRDEARFVQASRQMVESGDLVDIRLGDVPRYKKPIGIYWMQSAIVGAAQALGVPDATRTIWLYRIPSLIGAVLAVLLTFWAALPFVGRRGAVFAAILLATCAAVAVEARLAKTDAMLLATMVATMGALARAYLAPPERSGKVDIRLAAIFWVAMAIGILVKGPLTPMFAGVTIITLAVIERSMRFVRPLAPVTGLVLCLVAVSPWFALILLRAGDSFIAQSVGGDMMSKLAGGQEGHGAPPGTYLLAFWGSFWPAAPLAALAAPLVWRARRLKPVRFLLAWVVPNWLIFELIPTKLPHYVMPTFPAIAILVAMVVERGGMALGNMRYARALWMWPIFGAAIAVGALVGLAVLDGSTSILAWPLLVVGFFALVVAVVFVGEYGVEKSSLLAVAGMLVSGFGVMQLIVPDMKSVWISPRLEELAAKERCATPGVPAQIASAGFNEVSLMFVMPGKVTFTNATGAAEFLAEGGCRVVFVERRMEDAFARRAEELGLRLERGESVFGMNFNNGRKLDISLYRGSRP
>NZ_CP048834.1|WP_170010522.1|1078322_1079105_-|glycosyltransferase-family-2-protein
MSDQLLDTAATAPARVTLLASLVIPARNEAGNMAPLIADIERMAKGFGALEVIVVSDGSTDGTDAELARLMATRPWLRGLRHDRSCGQSAAIRTGARAAGSGVIVTLDGDGQNDPAFIPALVRALIDGGPAVGLAQGQRVGRKDTVSKRYQSKIANAVRRAVLRDDTRDTGCGLKAIRRELYLALPYFDALHRFMPALVRREGYEVRLVDVLDRPRFTGQSNYGIWDRMWVGMLDLAGVWWLIRRRRPSPVVTEVPGHAG
>NZ_CP048834.1|WP_170010520.1|1077985_1078333_-|hypothetical-protein
MLVDIAHAVGDYLHDVFVIQIDGWIILGFVAQLLFTGRFVVQWLASEKAGRSVVPFAFWSFSIGGGALLLIYALYRKDPVFIAGQLLSLVIYLRNVQFVLRERRRDNAEAAQQQA
>NZ_CP048834.1|WP_170010518.1|1076654_1077860_+|cystathionine-beta-lyase
MAGHSGNDNKNKSGGHNGPPLATATEIVVAGRDPARFDGFVNVPVVRGSTVLSPTVADMEGHTGRYSYGRRGSPTLEGLETALTKLEGGAGVVLTPSGLSAVGLALLALLDAGDHLLMVDTVYQPSRRICTAQLRRLGIATTFYDPLVGADIAGLFRENTRAVFMESPGSQSFEMQDVPAIVAAARARGVTTLMDNTWATPYFFRPHDFGVDVSIQAGTKYLGGHSDLNLGTISANAALWPRIKGAYSDLGITVAPEDAFLAARGLRTMAVRLERHQESALKVARWLAARPEVLSVLHPALPEHPGHAIWQRDFKGSSGLFSIILKPAPKSAVDAFLDSLGLFGLGYSWGGFESLAIPFDCSTYRTATQWAAGGPAVRFHIGLEDPADLIADLERGLAKLA
>NZ_CP048834.1|WP_170010516.1|1074898_1075915_-|amino-acid-ABC-transporter-substrate-binding-protein
MKRLLSTLALAGAFGLVAAGAQAAKLDQIKSKGFVTCGVSQGLPGFSTPDDKGNWTGMDVDLCRAVAAAIFNDATKVKFTPLSAKDRFTALQSGDIDVLSRNTTWTMSRDTQLGLNFAGVNYYDGQGFMIRKDKKVNSALELSGASVCTQTGTTTEQNLADFFRANNMTYEVIAFATNDEVVKAYDAGRCDALTTDRSGLAGERLKLTNPDDHIVLPEIISKEPLGPVVAHGDDQWFDLVKWTLFAQINAEELGITSKNVDEQLKSANPEVKRLLGTEGNFGEMLGLSKDWVVQIVKLVGNYGEVYDRNVGPNTPLKLERGTNALWSKGGLQYAPPVR
>NZ_CP048834.1|WP_170010514.1|1073597_1074788_-|amino-acid-ABC-transporter-permease
MADIAQPVPLRTGTSFVNDPRVRSIVLQVVALALVIFLGWMFFDNVRDNLAAQRIATGFGFFDKTAGFGINQTLISYSETSTYGRAFLVGLLNTLLVAVVGIFFATIIGFLVGIGRLSKNFVVRLLSTVYVEVLRNLPPLFQILFWYLAVLSAMPNPRQSISIFGEAFVSNRGIIVPRPLFGEGTGLVLWAFGLGLLLTILLSGLSASRREETGRGLRMLPIGLGLLVGLPLLAMVYTGFPISFERPELKGFNFVGGVRVIPEFVALTVALSTYTAAFIAENVRSGIQSVSHGQTEAANSLGLRSGPTLRLVVIPQAMRVIIPPLTSQYLNLTKNSSLAVGIGYPDLVAVFAGTSLNQTGQAIEIIAVTMGVYLAISIFTSVIMNAYNKRVALVER
>NZ_CP048834.1|WP_170010512.1|1072216_1073587_-|amino-acid-ABC-transporter-permease
MTMSDSSSYIRTEMEASRPPPGSQVGVIGWMRANLFSSALNTILTVIGIALVVWIVPPMVKFFFIDAVWKGQNREACLGPGVGACWPFIQAKFGQFIYGFYPGSERWRVNIVFALGALLLVPLLVLSWPGKRLNAILFFAVYPVVAFILLTGGNVNANAFLLQRFGLIRPLTGDVMVMGVNLAFWADYVLTTLIVMGVASLIGSLVGAGKATAQTVFWIFLALGIVIFVCDIDFGLPYVETRQWGGLLVTLVIAVTGIVTSLPLGILLALGRRSKMPIVRLLCVIFIEFWRGVPLITVLFFATYMLPLFLPAGTNPDGLLRALVGVALFSAAYLAEVVRGGLQAIPKGQYEGAMAMGLTWSQMMRLIVLPQALTMVIPSIVNSFISLFKDTTLVLIVAIFDFLGQLRAAFTDPNWASPVTLYTGFAFAGVVYFFFCFGMSRYSLFVERRLNTSHRH
>NZ_CP048834.1|WP_170010510.1|1071402_1072200_-|amino-acid-ABC-transporter-ATP-binding-protein
MSQAPSIVPSDEIPAVHVEPAKEVAVELIGVHKWFGEFHVLKDINLRVKRRERIVVCGPSGSGKSTMIRCINRLEEHQQGSIVVDGIELTNDLKRIDEIRREVGMCFQHFNLFPHLTILENCTLAPIWVRKMPKKDAEDLAMHFLRKVKIPEQANKYPGQLSGGQQQRVAIARALCMKPKIMLFDEPTSALDPEMVKEVLETMVSLAEEGMTMLCVTHEMGFARQVANRVIFMDAGQIIEMNEPNEFFSNPQHERTKLFLSQILH
>NZ_CP048834.1|WP_170017920.1|1069964_1071128_-|hypothetical-protein
MKTRNSFRVALGGAALSGVLLLAGAGGALGQSAQAIKEIPADKGKVAGSIIIDYNSRSERSASGVDTYDISEIAVADLFLMKGTIQRTPGSKLAYSVRYDVINPTNPGQIARDVAILRGEMQIDNRGRYLPETGQLRLDVVKGNQTTSKVTGSIQGREVTRWWEVGELVRRAKTEATKVYSRYVDGKVVSIQVKNPDPLRFERLGLPSGPFSFLPETRVSGNLDYDYELGNWLTDQNGVTFAYTVGDKSYTDRVTGSIRYVEETGSTTDAKGKKREYTGYYEYNLRWNEQQAASGGDQFFDEANAAAQSDAFFSTSDQTKPGLYGKVFYSDTDDACKRIKKDDGKMECVGPTRSEVTYSLNAVKLNYQQLASWMKLELLVIGPFTDE
>NZ_CP048834.1|WP_170010508.1|1069520_1069958_+|PIN-domain-containing-protein
MSGYLLDTNAISLLAPGQEASDAAGFRAWVGERGGELFLSAITIAELQAGVSRLERKGATRKAEALSRWLHLVLELYAPRILALDAHAALETGRLLDRSIGAGGEPGFEDAAIAAIAAVHELVVVTANTRHFKLFGVPFMAPPAA
>NZ_CP048834.1|WP_170010527.1|1085378_1086119_-|SDR-family-oxidoreductase
MTQGIKDKVIVITGASSGLGEAAARRLAAEGAKLILGARRLDRLQALAGELSLGEGAFVRTDVTRAEEVRHLVDHAVRTHGRVDVIINNAGLMPHSPLERGKVEDWDRMIDVNIKGVLYGIAAVLPYMSAQKSGHIINVSSVAGHKVRAGSAVYAATKAAVRMLSEGLRQEVKPYNIRTTIISPGAVESELPQSITEADVAKGVQDFYEANAIPADSFARAVAFAISQPAEVDINEILFRPTQQEF
>NZ_CP048834.1|WP_170010529.1|1086157_1087144_-|aldo/keto-reductase
MQMRKLGNGGLEVSAIGLGCMGLSFGYGPALDKPAGVALIRSAIERGVTFFDTAEVYGPFTNEELVGEALAPVRDRVVIATKFGFDTNGGARHGLNSRPEHIKRVAEASLKRLRTEFIDLFYQHRVDPQVPIEDVAGAVKELIAEGKVRHFGLSEPGVQTIRRAHAVQPVAAVQSEYSLWWREPEQEVLPALEELGIGFVPFSPLGKGFLTGAISETTTFDSNDFRNVVPRFTPEARKANQALVDRLGDIAARKRATPAQIALAWLLAQKPWIVPIPGTTKLHRLEENIAATGVELTPDDLGEIAGAVSAITVEGARYPEHLQKLVGR
>NZ_CP048834.1|WP_170010531.1|1087183_1088392_-|carboxymuconolactone-decarboxylase-family-protein
MKLPAAMAAVISLAVPAEAEQAGAPRRVAPAIVYEVAPALGAYTDEVLFGDVWKRTELAPRDRSMVTIAALIAGGHTAQMTGHFNRALDNGVKPGEIAGTITHLAFYAGWPRAMSAVGVAKDVFTQRGIGAEQLAAQSSERIPVDDASEAQRAAAVEAQAGAVAPALARYTNVVLFGDLWRRADLAPRDRSLVTITALIAAGQVDQLAFHMNRGMDNGLSQTQLSEVITHLAFYAGWPRAMSALPVAKTVFETRAGRQDVAPASGTRGRTAMEILRHGSQPPSDGPADYFTGRVRIEQRFQRNDPARIGGAFVSFEPGARTAWHTHPLGQTLIVTSGTGWVQREGEDIQEIRVGDIVWIPPGEKHWHGATATSAMTHIAIAEARDGKSVDWMEQVSDEQYGR
>NZ_CP048834.1|WP_170010533.1|1088568_1089462_+|LysR-family-transcriptional-regulator
MRREELGDLAAFLAVARERSFTRAAAQLGTSQSALSHTIRRLEERLGVRLLTRTTRSVSPTVAGERLLQSLGPRFEEIELELAALSELRDKPAGTIRITAGEHAADAILWPALEKVLPDYPDIKVEIIVNYGMIDIVAEGYDAGVRLGEQVARDMIAMRIGPDMRMALVGAPAYFASRPAPLAPQDLTAHSCINLRLPTYGGLYAWEFEKDGRELKVRVEGQLVFNTLALRLNAALAGLGLAYMPEDAVRTHLAEGRLVRVLADWCPPFPGYHLYYPSRRQSSAAFAVLADALRYRG
>NZ_CP048834.1|WP_170010535.1|1089503_1091243_-|HAMP-domain-containing-protein
MVTNAPARPRTSLFTKYFLALFAAVVVPLLIAGGSEAWLGYRDQRARLSDLLDAEARLAAVKIQEFLEGIRDQLGWMVQLPWSVGADERRRLDGLRLLRQVQPVLSLRLVDSAGKERLFVSRIGLNRIESGDDDSRNPAVIGARAQRVWFGPVTFQGGSEPYMTVAVAGNRSAVGVAIAEVNLKFIWEVISAIRVGQTGKAFVLDQPGRLVAHPDISLVLRADHATTRPLQLLRAAILAQPGQAIAGRDIEGDAVMAAMASIPMVEWSVIVEQPAAEAFGPIYAALWRTGALLIAGAILAALLAYWLTQRMVGPIRLLEDGVARIGAGQFDHRIELTTGDELERLAQRFNEMAGELAVSQERSERISRLKRFLAPQVAELVDQSGDDRVLDGRRVEVVAVFCDLRGFTAFSTQVKPETIIGVLGSYYDALGRVVATHGATLTNFSGDGAMVLVNAPVACPDPAGRAVAMARDMQASVQTLLAEWRAAGHQLGFGVGLAMGPATVGRIGSEGRLDYTAVGNVVNLASRLCASAKDGEILIDRVAAQAVGTAVALVELEARSLKGFNRHVHVFGVDTTATR
>NZ_CP048834.1|WP_170010537.1|1091289_1092270_-|ABC-transporter-substrate-binding-protein
MRRRDFIASMVGVVAWAGPARAQPSAMPVIGYLGSENPERYASRLAAFAEGLAETGYVEGRNVAIQFQWADGQYRQLPALAAELVKRAVTVIVAPGGAEVALAAKSATSDIPIVFELGGDPVALGLVTSLSRPDGNMTGVTSLSVEVSRKRLEFMSELFPEAKRFAIAANPTSPTVNSQLTNLHAAAATLGLQLRVLNASKSDEFEGMFASVRDMEAAGLVFTSDPYFANRSRRLAELAAQHAVPAITQSRDFPVAGGLMSYGGDFQQSHRHTGIYAGRILKGEKPADLPVQRVTKVEFFINLKAAQSLGLTVPPSLLSSADVVIE
>NZ_CP048834.1|WP_170010539.1|1092471_1094790_-|EAL-domain-containing-protein
MAYPVPENEAERLAELYALDILNACPTPSMDGICAIACEALGATSACVGMVDRDRQWFKATSGIGLAIDGTSREDSFSTWTILSDDILVVPDTTADPRFRDNAYVTGAPHIRFYAGAPVAVRPGLNIGALCIFGPEPRELTAGEAEIVRHLASVVADQIRLHEATRSAKSELEHRRTSQNQLEHQSRELWRRQTLLAQTERLAKVGGWEFDVASGKLTWSDGVYRIYGMTPGREPSPDLALSHFPSEARAQFQRRFEASLRTGESFELELPFIDAQGRNRMVRKSCDIERDGEAAVRAFGILQDVTEQKEAEQRMWHMANHDALTDLPNRGLMRDRLDVALRRARRAGCHVVLLLIDLDQFKDVNDALGHDAGDALLIEAARRLIECVREVDTVARLGGDEFVVVLDRVTSAAEGMEVAERILEALREPFVYRRGKLSCRGSIGFAMAPEHGTDPQELLKNADIALYRAKAAGRGIVVQYDVVMREATESRVQLNGRVRMGLENGEFLPYYQPKISLRTGAIAGFEALLRWRHPRKGLLGPGDFAGAFEDTDLAIAIGARVLDVAVRDMREWLDAGHEFGRVAINVTSAEFARGELAERVLDALAERSVPPERLAIEVTESVFLGRGIEAVRHSLSKLHHAGVLIALDDFGTGYASLTHLKQFPVDRIKIDRSFISDIERDADDAAIVRAVVNLGHSLGIKTTAEGVETVSQAAYLRMNGCDFAQGFLFSKALPATRVPWLLRNWTPGRWAGLGFPLVGGSDLLRGQDAQGA
>NZ_CP048834.1|WP_170010541.1|1095038_1095689_-|urease-accessory-protein-UreG
MMETSGPLRVGIGGPVGSGKTALMEALCRTFRERYDLCAITNDIYTKEDAEILTRAGALPAERIMGVETGGCPHTAIREDASANLAAIADMRARFPKLDLILIESGGDNLAATFSPELADITIYVIDVSAGEKIPRKGGPGITRSDLLVINKIDLAPYVGASLEVMDRDSQRMRGRRPFVFANVRAGQGVEDVARFIEQAGGLVPHGSKSPALAGV
>NZ_CP048834.1|WP_170010543.1|1095706_1096465_-|urease-accessory-protein-UreF
MTTSAATTTTITTTTMPTGTAEAGGHQDAVDLLPLLVWLSPAYPVGAFAYSHGLEWAVETGDIRDAATLMDWVSDLIRHGGPFCDAVLLALAWRALRDGSDADLREVAELAAAFAPSRERQMETLNQGDAFMTATRAAWPAPRLDRLAHAWDGRVAYPVAVGVSAAAHGLPLASTLSAFLTAVAANLVSAAVRLVPLGQTDGNRVLAGLVAEVRAAAQAAPDVPLDAIACAALRSDIASMRHETQYTRLFRS
>NZ_CP048834.1|WP_170010545.1|1096400_1097132_-|urease-accessory-protein-UreE
MIRANEVLPAGTWNAASAADRVVLPHDGRHRRRIAMRGEGDVAFLLDLTEATHLKHGDGLKLDDGRIVAVVAAEEPVAEIVARDAHHLARLAWHLGNRHVAAELLADRIRIARDNVLEEMARGLGATVSVVEAAFEPEGGAYEAAEAHGHEHHAHEHHAHDHHEHGEACGCGHSHHDHAHHDHAHHDHAHHGHDHDHGHDHGHDHDHKHAHEPARDVIHVHDHDHKRGHDHDDHHHDHAHRHG

Crispr_ID: NZ_CP048834_2

• CRISPR_ID: NZ_CP048834_2
• CRISPR_location: 1766182-1766279
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048834_2

Consensus_repeat	Method
TCCTGGAAGAACTTGCCCGGCGGCGC	CRISPRCasFinder

spacers of NZ_CP048834_2

>2.1|1766208|46|NZ_CP048834|CRISPRCasFinder
GCTCGGCGGCGGCGCAAACTGGCCGAACAGCCGCGGGTCCAGCAGT

CRISPR arrays and Neighbor proteins around NZ_CP048834_2

CRISPR arrays

The CRISPR arrays of NZ_CP048834_2

>merge|NZ_CP048834|2|1766182-1766279|CRISPRCasFinder
TCCTGGAAGAACTTGCCCGGCGGCGCGCTCGGCGGCGGCGCAAACTGGCCGAACAGCCGCGGGTCCAGCAGTTCCTGGAAGAACTGGCCCGGCGGCGC

>NZ_CP048834|2|2|1766182-1766279|CRISPRCasFinder
TCCTGGAAGAACTTGCCCGGCGGCGC	GCTCGGCGGCGGCGCAAACTGGCCGAACAGCCGCGGGTCCAGCAGT
TCCTGGAAGAACTGGCCCGGCGGCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048834.1|WP_170011632.1|1767576_1768677_-|DUF4043-family-protein	unknown	unknown	gnl|CDD|372532
NZ_CP048834.1|WP_170011641.1|1772399_1772681_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011620.1|1762244_1762994_-|hypothetical-protein	unknown	unknown	gnl|CDD|237057
NZ_CP048834.1|WP_170011612.1|1760371_1760707_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011610.1|1758777_1760208_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011618.1|1761983_1762208_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011624.1|1764142_1764421_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011616.1|1761651_1761930_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011626.1|1764450_1764699_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011636.1|1770702_1771128_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011622.1|1763816_1764125_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011635.1|1770260_1770548_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein	unknown	unknown	gnl|CDD|283241
NZ_CP048834.1|WP_170011630.1|1766782_1767073_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011614.1|1761203_1761500_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011633.1|1768688_1769447_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011639.1|1771809_1772328_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011634.1|1769854_1770142_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170017970.1|1763421_1763679_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011631.1|1767132_1767564_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein	gnl|CDD|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	2.79567e-07
NZ_CP048834.1|WP_170011632.1|1767576_1768677_-|DUF4043-family-protein	gnl|CDD|372532	pfam13252, DUF4043, Protein of unknown function (DUF4043). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 369 and 424 amino acids in length. There is a single completely conserved residue G that may be functionally important.	2.36296e-15
NZ_CP048834.1|WP_170011620.1|1762244_1762994_-|hypothetical-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	0.00587515

Protein sequences

>NZ_CP048834.1|WP_170011626.1|1764450_1764699_-|hypothetical-protein
MNKLINISEVDDLLFGDGSKLDIYYIERTPLGDFVCFIGPSGAEFTLLIEDSRLHQMAVDRLLELGAPVVERPFNVVPPQQS
>NZ_CP048834.1|WP_170011624.1|1764142_1764421_-|hypothetical-protein
MTLLEAIRTLDELSDDGIIYAKEPWRGDAEAIVLPDFEDEAAIEEAVRLGFKYFLEVFIAREFLEDWSDDLRRAGAFQEICDRVIYYATYDA
>NZ_CP048834.1|WP_170011622.1|1763816_1764125_-|hypothetical-protein
MSDRYTNKRLIMLLEKYVLWSIGELSDTEERKLREMAPHLGRSFSARGTWQEVVASVMEFPPDMPATFNAMWLRNLEIASEHGAAMTPQRFAEMVVDENFPM
>NZ_CP048834.1|WP_170017970.1|1763421_1763679_-|hypothetical-protein
MAVITTWKILRSEDWIAHVFHDEDDGGWQFHGAEESRVEDAAIVALGEMFDQDNSIGELTDLPEGWEAWRESPFQPWRRAKTDWR
>NZ_CP048834.1|WP_170011620.1|1762244_1762994_-|hypothetical-protein
MPQLIAQGGRAIRDYAEPLIGGLTNPLARPEIVPAGGAPPVRPPNAYENRMPPPERPPAARAVPEAPPGWSNAEIFAPPDPAAGRFRTDYSKRDPSQHAFEHGALNQEGGKNYSAPRTPGLGTHVSMDELMRTGALPGQKGVIIVGRPVTFGEVYKLSTLNGRKVEFLIVRHRLDGKPITKLYSGNHEACPLPEDGWIVAHTHPTEGSTQRMPSDVDMRILNRRYFRDLEANPKLRPPRSWIIWGGGSK
>NZ_CP048834.1|WP_170011618.1|1761983_1762208_-|hypothetical-protein
MSHTTQTTSIDNLLFRDGLRLENYYIERTLFGDFVCFIGSDGAKFDLLIEDSQRNEMAIARLLELGAPVVKCRV
>NZ_CP048834.1|WP_170011616.1|1761651_1761930_-|hypothetical-protein
MNSDFIPSAATMTSDERMPTPDEFLFGNGARVEDYFIRRTPISEVICTIEDGQEYSLLISNQELFEGVRARLLELGVRIVERQFSSPGTRPG
>NZ_CP048834.1|WP_170011614.1|1761203_1761500_-|hypothetical-protein
MTRDELKNSGEGYARLYRNAHLVLASVFFDRDAGHLIASYFYDREPDEDDQEECELFCGELIGNFPEIRTGETICKFVGAYSGVLRPGEMVVYSRGEF
>NZ_CP048834.1|WP_170011612.1|1760371_1760707_-|hypothetical-protein
MTRQDLILAVLERLNVVGVGQAPAAEDIATVGARLDGQFSQLARRGVVYVQDADDLDAELIDPLATIVASACAPAYGQAPNRAGVIEAENTLREMQPGDGAGRGTVSARYY
>NZ_CP048834.1|WP_170011610.1|1758777_1760208_-|hypothetical-protein
MPDIIFPLSSAPGRRPIEGQGRLVNAMTEQLGPGGQADHARRPAPGLRFLIDTLGTGACRGFLFVNNVLLMCRGDRLIKIEPAGSGYAATDIGGLAGEGPVYFERNNKAPTPDIVAVASEGAFQIDLTTGPVSFIDPDLDQPNSVTFQDGYFIFTLADGRIVTSGINDTSVNPLDFTTAQARPGGLYRGISFGQQTFAFGPNSIEVFANTAQAEGFPFTRTAVIPRGLIAPDAIAGFEDGWVSSLIWVGDDRAVYRLDGGYVPSLISTPDIDRALQSVDDVGSLHALVFTHPGHPCWAIIGPDFAWVYDLSTGFWHERQSYLAPNWLAKGSVRAFGEWVVGHAANGRLYRIDDDYRREGDDPMVIRITSAQGAAFPNRLAVPRADFNFVVGQGLAGGVQPVETDPRCWISYSDDGGNLFSTPVWRQLGRQGEYGTRVSINRCGLTGPVGRVWRLEMSDPVYVTLLSGAHEIDARPR
>NZ_CP048834.1|WP_170011630.1|1766782_1767073_-|hypothetical-protein
MGFVSYAPAPDEAAVTSVFGLELRAGAVIEVDEAVYAKLRRHPQFSTGKEPEGARQDAPPRVARNRAAMRDEAAMRAREYAAELADAAGGVKPAIG
>NZ_CP048834.1|WP_170011631.1|1767132_1767564_-|hypothetical-protein
MGDYWTNPVRHPEDVGVGHIRRTVEWDDAGLVTGIPIGALEAGAIPLRAGVLVQTAFNAGTTNVLVLGSTADDDGLVTSANAAAGALGVKVGTGAQIGIPLAANTVFYAKFTQTGTAASAGKATLWVEYLNKREVEGTAFPAN
>NZ_CP048834.1|WP_170011632.1|1767576_1768677_-|DUF4043-family-protein
MAETRATGTLSPSIWDDKFSTEFFQTNPFAAYAGTGTNNAIVMKEEFASKRGNGITFEFITNLVRGTLFDRQPLRGHEDQLGEYGDRIFWRLRKKGISMHELDQDFAAIDLRKAARGNLKTWSMEDVKWETIDRLGDVGANCDVPFATATAAEKNDWTNRNADRVLFGNSTANYSATFATAAGNIDTTNDILTRDNLSILKTIALQARPRITPIEVMERSNRRYFVAFAHPLVFRAFRKDTETVRSAVKVVDRNESIFLGGDLEYDGIVLHEVDDMPIYDNIGNGGADVSPVYLLGQEALGWAIKSRYASREQKDDYGQIEGLGMIGKWGMKKLCYSENFPNPAQDPTVLGKQRGVATGFFAAVGV
>NZ_CP048834.1|WP_170011633.1|1768688_1769447_-|hypothetical-protein
MTQSLDAIMADRDAVLSANDTATPEPAGGALADAYSEDGHTDTPLGLADDTQAGRPERQPGMVPQQALHAERQARRALEREIGEIRNMLHAQVPQPDPLTQFANDPAGFLQQQVSPVAHQVNEMREMMLELRAAQSHGADRMEAAKRAAEELRDSGDPAINALAVRLLNTANPFDELVRWHDEQARVSRFGDDPEGYINAEVERRLAGGPPQYPAASFARSMPPSFAGARNSAPRQSQNYGGPRPLSEIMKR
>NZ_CP048834.1|WP_170011634.1|1769854_1770142_-|hypothetical-protein
MRTVLLTLPFILMANAAFAQAGPNSLAMSCSTARATVQQGGAVIMYSGPDIFDRFVSNVSYCEGNEWTVPAWIPTEDNPHCLVGKRCKEIELNSR
>NZ_CP048834.1|WP_170011635.1|1770260_1770548_-|hypothetical-protein
MRTLLLTISFTIAAGAAFAQDGPNSLTMSCASAQRLVQERGAVVIWSGPNIFDRYVANGGQCAGSEMTVPAWIATQDQQQCPVGQRCKQIEPGQN
>NZ_CP048834.1|WP_170011636.1|1770702_1771128_-|hypothetical-protein
MKPAVKISTVAMLATLVLGSVPSYGANRYGIACVDNRTNQRINFSVKIGDGQWKPQNLAPGTRRWFTHTYDRVNENSSSSIRVRFDSDLRGTNFSTVYKLTRHTAVADKCDEGYIYAFRYEPRDRRYIDLVPVDGGQLASE
>NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein
MGSTADKAKGMVNEAAGKVKQGVGRATGNRDLEAKGAAQELKGKGQKTIGKAKDAVKKAANL
>NZ_CP048834.1|WP_170011639.1|1771809_1772328_+|hypothetical-protein
MTAIIIVEPSSEIAGELAVAFEGTDIRIVCGTLDDVQAEAFAIASTASGELLFEMPERPFDPNLRIAMRQEFDRSGHLAAGEVRGFVTGDTGGFATIVVVPMLEFADARLLGSGSVLEAMRAVFRCGEALGLSSLAVRFPFLPQPGLPAAFVIQQARQAYALEREESTGAQE
>NZ_CP048834.1|WP_170011641.1|1772399_1772681_-|hypothetical-protein
MHRLVLTIPFVLMAGAAIAQDGPNSLAMSCAAVQGIVQSRGAAVIWTGPNIFDRFVAGQAQCQNDQYPVPAWIATQDQQQCLVGNRCKQMEQQ

Crispr_ID: NZ_CP048834_3

• CRISPR_ID: NZ_CP048834_3
• CRISPR_location: 1779264-1779361
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048834_3

Consensus_repeat	Method
CTGGCCGAACAGCGCGGGGTCGAACA	CRISPRCasFinder

spacers of NZ_CP048834_3

>3.1|1779290|46|NZ_CP048834|CRISPRCasFinder
GGCGGCGCAGGAACCGGCCTGGCGGCGCCGGCGGTGGCGGCGCGTA

CRISPR arrays and Neighbor proteins around NZ_CP048834_3

CRISPR arrays

The CRISPR arrays of NZ_CP048834_3

>merge|NZ_CP048834|3|1779264-1779361|CRISPRCasFinder
CTGGCCGAACAGCGCGGGGTCGAACAGGCGGCGCAGGAACCGGCCTGGCGGCGCCGGCGGTGGCGGCGCGTACTGGCCGAACAGCGCCGGGTCGAACA

>NZ_CP048834|3|3|1779264-1779361|CRISPRCasFinder
CTGGCCGAACAGCGCGGGGTCGAACA	GGCGGCGCAGGAACCGGCCTGGCGGCGCCGGCGGTGGCGGCGCGTA
CTGGCCGAACAGCGCCGGGTCGAACA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048834.1|WP_170008850.1|1784663_1784918_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011651.1|1775418_1775841_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011659.1|1780135_1780399_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011653.1|1775840_1776038_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011673.1|1784914_1786396_-|TNT-domain-containing-protein	unknown	unknown	gnl|CDD|379424
NZ_CP048834.1|WP_170011645.1|1773254_1773542_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein	unknown	unknown	gnl|CDD|283241
NZ_CP048834.1|WP_170011661.1|1780452_1780737_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011655.1|1776222_1776501_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011665.1|1781523_1782816_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011667.1|1783439_1783727_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011671.1|1784116_1784422_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011669.1|1783798_1784089_-|SseB-family-protein	unknown	unknown	gnl|CDD|377787
NZ_CP048834.1|WP_170011675.1|1786882_1787749_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011641.1|1772399_1772681_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011643.1|1772812_1773100_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011647.1|1773768_1774461_+|SOS-response-associated-peptidase	unknown	unknown	gnl|CDD|376837
NZ_CP048834.1|WP_170011663.1|1780960_1781284_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011639.1|1771809_1772328_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP048834.1|WP_170011649.1|1774843_1775236_+|DUF1801-domain-containing-protein	unknown	unknown	gnl|CDD|227936

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein	gnl|CDD|283241	pfam05532, CsbD, CsbD-like. CsbD is a bacterial general stress response protein. It's expression is mediated by sigma-B, an alternative sigma factor. The role of CsbD in stress response is unclear.	2.79567e-07
NZ_CP048834.1|WP_170011647.1|1773768_1774461_+|SOS-response-associated-peptidase	gnl|CDD|376837	pfam02586, SRAP, SOS response associated peptidase (SRAP). The SRAP family functions as a DNA-associated autoproteolytic switch that recruits diverse repair enzymes onto DNA damage. We propose that the human protein Q96FZ2:UniProtKB, the eukaryotic member of the SRAP family, which has been recently shown to bind specifically to DNA with 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxycytosine, is a sensor for these oxidized bases generated by the TET (tetrahedral aminopeptidase of the M42 family) enzymes from methylcytosine. Hence, its autoproteolytic activity might help it act as a switch that recruits DNA repair enzymes to remove these oxidized methylcytosine species as part of the DNA demethylation pathway downstream of the TET enzymes.	3.4888e-64
NZ_CP048834.1|WP_170011669.1|1783798_1784089_-|SseB-family-protein	gnl|CDD|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	2.17049e-05
NZ_CP048834.1|WP_170011673.1|1784914_1786396_-|TNT-domain-containing-protein	gnl|CDD|379424	pfam14021, TNT, Tuberculosis necrotizing toxin. This is the C-terminal domain secreted by Mycobacterium tuberculosis (Mtb). It induces necrosis of infected cells to evade immune responses. Mtb utilizes the protein CpnT to kill human macrophages by secreting its C-terminal domain (CTD), named tuberculosis necrotizing toxin (TNT) that induces necrosis. It acts as a NAD+ glycohydrolase which hydrolyzes the essential cellular coenzyme NAD+ in the cytosol of infected macrophages resulting in necrotic cell death. CpnT transports its toxic CTD from the cell surface of M. tuberculosis by proteolytic cleavage, where the toxin is cleaved to induce host cell death. Structural analysis determined that the TNT core contains only six beta-strands as opposed to seven found in all known NAD+-utilizing toxins, and is significantly smaller, with only two short alpha-helices and two 3/10 helices. Furthermore, the putative NAD+ binding pocket identified Q822, Y765 and R757 as residues possibly involved in NAD+-binding and hydrolysis based on similar positions of catalytic amino acids of ADP-ribosylating toxins. While glutamine 822 residue was detected to be highly conserved among TNT homologs.	8.48522e-27
NZ_CP048834.1|WP_170011649.1|1774843_1775236_+|DUF1801-domain-containing-protein	gnl|CDD|227936	COG5649, COG5649, Uncharacterized conserved protein [Function unknown].	7.9148e-55

Protein sequences

>NZ_CP048834.1|WP_170011655.1|1776222_1776501_-|hypothetical-protein
MRTFLFTLPFVLVAGAAFAQGGPNAASMSCASAQQMVQQQGAVVLWDGPNVMGRYVSGQQYCDVNTFIAPAWIKTQDNPQCLVGNYCQQQNQ
>NZ_CP048834.1|WP_170011653.1|1775840_1776038_-|hypothetical-protein
MPSEHSPAGREPIVTDEDLDAAIALCGGDPRLALRAMFIAYTMLQEQAQNAVSAGYVRRRRERTH
>NZ_CP048834.1|WP_170011651.1|1775418_1775841_-|hypothetical-protein
MGEHLPERWPRDQMDDAFVDSIVESEGHGDWREAIRNLVDRVWGLHEEILRLTRGEPRGGRQSSHLDRMVSTIDHSVICTECSHCLHRTAQPPAMVRSFYKNREVTLREWAASQRCRCGQLGVDVVLRDTRDAKNWMLQR
>NZ_CP048834.1|WP_170011649.1|1774843_1775236_+|DUF1801-domain-containing-protein
MKKGAPTNGESPSRLIDARIKELDGWRGETLAHVRALIQQADPDVIEEWKWSVPVWSHHGIICTGEAYKATVKLTFAKGAALEDPTRLFNSSLEGNTRRAIDLREGVEIDAEAFKTLIRAAVALNRSSAK
>NZ_CP048834.1|WP_170011647.1|1773768_1774461_+|SOS-response-associated-peptidase
MCGRVTQTSGELPGLVCFLGSDHDPRVVDAAGLERKRYNGAPSQDFWVIRRHPETGQNVRDRLRWGFEAPWMRAQKVRPQIIARSDRIATAPMFRDAYMKRRCLLPVDNFFEWDASIQPKQPYGVGLKSGLPFGIAAIWTGYQDTSGRWVRTFAVVTCAANERMARIHDRMPVILTIEGYERWLANIEPDPADLMVPYPSDETRIWPVGPRVNSAGNDDAGVLEPVGEDE
>NZ_CP048834.1|WP_170011645.1|1773254_1773542_-|hypothetical-protein
MKTVLFTLPIILMAGASLAEARPNSLAMSCASTRGLVANTGAVIIGTGPDIFDRYVTDAGYCTITQKAEPAWLATADEPQCLIGRRCVERRVKVR
>NZ_CP048834.1|WP_170011643.1|1772812_1773100_-|hypothetical-protein
MRTLLLTLPFILMADAALAQARPNSLTMSCASVQALIQARGGIVIGSGPDIFDRFVSSARYCMGGETTDWTWVRTRDVRQCPVYRCQEIEEWMIR
>NZ_CP048834.1|WP_170011641.1|1772399_1772681_-|hypothetical-protein
MHRLVLTIPFVLMAGAAIAQDGPNSLAMSCAAVQGIVQSRGAAVIWTGPNIFDRFVAGQAQCQNDQYPVPAWIATQDQQQCLVGNRCKQMEQQ
>NZ_CP048834.1|WP_170011639.1|1771809_1772328_+|hypothetical-protein
MTAIIIVEPSSEIAGELAVAFEGTDIRIVCGTLDDVQAEAFAIASTASGELLFEMPERPFDPNLRIAMRQEFDRSGHLAAGEVRGFVTGDTGGFATIVVVPMLEFADARLLGSGSVLEAMRAVFRCGEALGLSSLAVRFPFLPQPGLPAAFVIQQARQAYALEREESTGAQE
>NZ_CP048834.1|WP_170011637.1|1771523_1771712_+|CsbD-family-protein
MGSTADKAKGMVNEAAGKVKQGVGRATGNRDLEAKGAAQELKGKGQKTIGKAKDAVKKAANL
>NZ_CP048834.1|WP_170011659.1|1780135_1780399_-|hypothetical-protein
MLFDGGELDPAASELIRVYALAGGDLRGRGSALSGVPEDAGHPVDRKQRFIIKLHFLLSFLRGDERFILNPGNPKPVKLTTADLAHG
>NZ_CP048834.1|WP_170011661.1|1780452_1780737_-|hypothetical-protein
MRYIKAKWIHNSPEFPILLFSELDAKHWEIRKVEVYADGRMDFADGKVQSGNTDLGLVPVPSLEEIASDPEFEPVATSAEEFEAIWKVAKAGNL
>NZ_CP048834.1|WP_170011663.1|1780960_1781284_-|hypothetical-protein
MTIDNFEVIDALGLSPSDDVVLLMIFDGWDWTDEWMHLVTLQEKINVYFGFVESGQVYENYPIAVGRQLCIDIIAKFPLPGVGEDFLKQASAAAGELGITIRHKVTP
>NZ_CP048834.1|WP_170011665.1|1781523_1782816_-|hypothetical-protein
MAQFKNSPPPDWGGWRDDPLYFPRSDPLSGGYDPGEDYDGLTAPVPSAPPRSTTPFGQFLPSLLEAVARLPQPAPPGRFLPSIGVNLPEPKTVLATRRYDPPPPPLTPLEPPADYTSLTVPKPMVGPQSTERVDGFGATAQRQPGEFEPAEGDGVMMNAAAGLAQGVYGTLGAPVDAMTWALNGGISLANFAGADLPHIEDPFLGSRSLARGGTYLGIPDPESVAAVTLAERIARGVGEGAAYAVAPATMVRGGAAMAGRQLGPRGQAAFGRINSVREAGRDMAIGAAAGTTGKAARELVPEAWKPTAEVVGGLIGGVAGAGALARGGVAQVGRTPSGGRVAAEAWDRQFAPPTQHGAKALNPRLMPAKRPENAKIKVELRIGEDLDGALKRKRWQLAQNRTVGEAFEADAFAKISPEEAIHTQRQVTVQ
>NZ_CP048834.1|WP_170011667.1|1783439_1783727_-|hypothetical-protein
MSWKFLDPPNVAVITHRQIMKGEEWIAYVSHDDDDGCWQFLGPGDAREEDASIVGLKEIFDLDNSIGELADLPEGWHAWREAPSAPWRRGKTDWR
>NZ_CP048834.1|WP_170011669.1|1783798_1784089_-|SseB-family-protein
MQEEVVVIGGWEDEQSHFIRLQDFIIDGEKVIPIFSDEAEFKRQALGSGFEKQGLIIKLDFLLSFLRGDELFILNPGDPEPLKLTTADLAHAYAHG
>NZ_CP048834.1|WP_170011671.1|1784116_1784422_-|hypothetical-protein
MDDNLVEFLRRFDVAIKMAEEARAQVRPDRDSWQLEYYQLLITNLRGYRQSVVEGRLGRVSRGEVQPGTGFGMGMWLGEWCENDDVLGACSEVENYFRYEF
>NZ_CP048834.1|WP_170008850.1|1784663_1784918_-|hypothetical-protein
MTREEFLHAVRAESVRLDTFNLDNVGDECFVLAQSGYDWRVYYSERGLETSARHFATESDALTYLLEELRAQKRRESQWGIDDR
>NZ_CP048834.1|WP_170011673.1|1784914_1786396_-|TNT-domain-containing-protein
MDQRAHRRHPRLTPRPAPPPDWSGWRDDPLYYPRSDPLSGGYDPGEDYDGLTAPVPSAPPRSTTPFGQFLPSLFEAVARLPQPAPPGQFLASIGVHLPPPQSVLATRRYDPPPPPLTPLEPPADYTSLTVPKPMVGPQSTERVDGFGATAQRQPGEFEPAEGDGVMMNAAAGLAQGVYGTLGAPVDAMTWALNGGISLANFAGADLPHIEDPFLGSRSLARGGTYLGIPDPESVAAVTLAERIARGVGEGAAYAVAPATMVRGGAAMAGRQLGPRGQAAFGRINSVREAGRDMAIGAAAGTTGKAARELVPEAWKPTAEVVGGLIGGVAGAGALARGGSAITSGRAAADAAARRPAADARPIQGHSTHIPDPSSSPVIGTRTGTALQTYWPPNRGFLETPVTERLDVGTRIDRYGEDTGTFFAPQGTPYWMRSLPPWIATTKPYNVYEVIRPFEVQSGKAAPWFGQFGQGTQYESSFNVVNGLAQGFIKRVGP
>NZ_CP048834.1|WP_170011675.1|1786882_1787749_-|hypothetical-protein
MMSSVAARRDVVTIDALLTALADSDLFVASRNEAMPGGPMFRPLVIQYEGIPFAMTFTAPNRPEPGAAIAWLYEDVLKVAGREFFLHLAPAIWRNGQSGLRYATDDRTARRVRSQAHAASTMGVPREDLSRILSEEIRQMSDDKPRLLPLSVPWMVATSMPSLRMQTAPDGRRRSVTFVAYFKLVDRRRSAFGEMPQIVEEAPPFELLQEPDEHPYHLVRINFVGGLYSRTTPRFSDGEVIPEDDYDWSAVQGALQPGEDTVDNVRRRRQFWLDHGISPDPGVYVVEK

Crispr_ID: NZ_CP048834_4

• CRISPR_ID: NZ_CP048834_4
• CRISPR_location: 5867198-5867269
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP048834_4

Consensus_repeat	Method
CCCTCTCCCCGTCGGGGAGAGGG	CRISPRCasFinder

spacers of NZ_CP048834_4

>4.1|5867221|26|NZ_CP048834|CRISPRCasFinder
AGCAGAAGGCGCTTCGATCGCGAAAG

CRISPR arrays and Neighbor proteins around NZ_CP048834_4

CRISPR arrays

The CRISPR arrays of NZ_CP048834_4

>merge|NZ_CP048834|4|5867198-5867269|CRISPRCasFinder
CCCTCTCCCCGTCGGGGAGAGGGAGCAGAAGGCGCTTCGATCGCGAAAGCCCTCTCCCCGTGGGGGAGAGGG

>NZ_CP048834|4|4|5867198-5867269|CRISPRCasFinder
CCCTCTCCCCGTCGGGGAGAGGG	AGCAGAAGGCGCTTCGATCGCGAAAG
CCCTCTCCCCGTGGGGGAGAGGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048834.1|WP_170017474.1|5859912_5861160_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|227296
NZ_CP048834.1|WP_170017483.1|5872011_5872737_+|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl|CDD|180341
NZ_CP048834.1|WP_170017479.1|5865477_5866524_+|cobalamin-biosynthesis-protein-CobW	unknown	unknown	gnl|CDD|274151
NZ_CP048834.1|WP_170017486.1|5874215_5875484_+|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	unknown	unknown	gnl|CDD|225150
NZ_CP048834.1|WP_170017481.1|5870082_5871381_+|precorrin-3B-synthase	unknown	unknown	gnl|CDD|274131
NZ_CP048834.1|WP_170017484.1|5872733_5873495_+|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl|CDD|180342
NZ_CP048834.1|WP_170017475.1|5862752_5863397_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl|CDD|235662
NZ_CP048834.1|WP_170017489.1|5876803_5878114_+|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl|CDD|234896
NZ_CP048834.1|WP_170017487.1|5875480_5875876_+|cobalamin-biosynthesis-protein	unknown	unknown	gnl|CDD|376648
NZ_CP048834.1|WP_170017485.1|5873461_5874256_-|cobalt-precorrin-6A-reductase	unknown	unknown	gnl|CDD|236144
NZ_CP048834.1|WP_170018304.1|5861149_5862601_-|cobyric-acid-synthase	unknown	unknown	gnl|CDD|234838
NZ_CP048834.1|WP_170017476.1|5863393_5863900_-|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	unknown	unknown	gnl|CDD|376754
NZ_CP048834.1|WP_170017482.1|5871370_5872015_+|precorrin-8X-methylmutase	unknown	unknown	gnl|CDD|181352
NZ_CP048834.1|WP_170017488.1|5875872_5876631_+|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl|CDD|225430
NZ_CP048834.1|WP_170017477.1|5863896_5864649_-|CbtA-family-protein	unknown	unknown	gnl|CDD|227733
NZ_CP048834.1|WP_170017471.1|5855369_5857187_-|DNA-helicase-RecQ	unknown	unknown	gnl|CDD|273594
NZ_CP048834.1|WP_170017478.1|5864667_5864862_-|CbtB-domain-containing-protein	unknown	unknown	gnl|CDD|370526
NZ_CP048834.1|WP_170017490.1|5878117_5878501_+|DUF423-domain-containing-protein	unknown	unknown	gnl|CDD|225238
NZ_CP048834.1|WP_170017473.1|5858418_5859732_+|pilus-assembly-protein	unknown	unknown	gnl|CDD|227296
NZ_CP048834.1|WP_170017472.1|5857275_5858235_+|cobalamin-biosynthesis-protein-CobD	unknown	unknown	gnl|CDD|377002

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP048834.1|WP_170017474.1|5859912_5861160_+|pilus-assembly-protein	gnl|CDD|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	1.80223e-07
NZ_CP048834.1|WP_170017483.1|5872011_5872737_+|precorrin-2-C(20)-methyltransferase	gnl|CDD|180341	PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed.	7.13734e-145
NZ_CP048834.1|WP_170017479.1|5865477_5866524_+|cobalamin-biosynthesis-protein-CobW	gnl|CDD|274151	TIGR02475, Probable_cobalamine_biosynthesis_protein, cobalamin biosynthesis protein CobW. The family of proteins identified by this model is generally found proximal to the trimeric cobaltochelatase subunit CobN which is essential for vitamin B12 (cobalamin) biosynthesis. The protein contains an P-loop nucleotide-binding loop in the N-terminal domain and a histidine-rich region in the C-terminal portion suggesting a role in metal binding, possibly as an intermediary between the cobalt transport and chelation systems. A broader CobW family is delineated by two Pfam models which identify the N- and C-terminal domains (pfam02492 and pfam07683). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	0
NZ_CP048834.1|WP_170017486.1|5874215_5875484_+|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE	gnl|CDD|225150	COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism].	3.90611e-70
NZ_CP048834.1|WP_170017481.1|5870082_5871381_+|precorrin-3B-synthase	gnl|CDD|274131	TIGR02435, Precorrin-3B_synthase, precorrin-3B synthase. An iron-sulfur protein. An oxygen atom from dioxygen is incorporated into the macrocycle at C-20. In the aerobic cobalamin biosythesis pathway, four enzymes are involved in the conversion of precorrin-3A to precorrin-6A. The first of the four steps is carried out by EC 1.14.13.83, precorrin-3B synthase (CobG), yielding precorrin-3B as the product. This is followed by three methylation reactions, which introduce a methyl group at C-17 (CobJ; EC 2.1.1.131), C-11 (CobM; EC 2.1.1.133) and C-1 (CobF; EC 2.1.1.152) of the macrocycle, giving rise to precorrin-4, precorrin-5 and precorrin-6A, respectively. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin].	9.90359e-64
NZ_CP048834.1|WP_170017484.1|5872733_5873495_+|precorrin-3B-C(17)-methyltransferase	gnl|CDD|180342	PRK05991, PRK05991, precorrin-3B C17-methyltransferase; Provisional.	4.4095e-146
NZ_CP048834.1|WP_170017475.1|5862752_5863397_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl|CDD|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	2.65045e-101
NZ_CP048834.1|WP_170017489.1|5876803_5878114_+|cobyrinate-a,c-diamide-synthase	gnl|CDD|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NZ_CP048834.1|WP_170017487.1|5875480_5875876_+|cobalamin-biosynthesis-protein	gnl|CDD|376648	pfam01890, CbiG_C, Cobalamin synthesis G C-terminus. Members of this family are involved in cobalamin synthesis. The protein encoded by Synechocystis sp.cbiH represents a fusion between cbiH and cbiG. As other multi-functional proteins involved in cobalamin biosynthesis catalyze adjacent steps in the pathway, including CysG, CobL (CbiET), CobIJ and CobA-HemD, it is therefore possible that CbiG catalyzes a reaction step adjacent to CbiH. In the anaerobic pathway such a step could be the formation of a gamma lactone, which is thought to help to mediate the anaerobic ring contraction process. Within the cobalamin synthesis pathway CbiG catalyzes the both the opening of the lactone ring and the extrusion of the two-carbon fragment of cobalt-precorrin-5A from C-20 and its associated methyl group (deacylation) to give cobalt-precorrin-5B. This family is the C-terminal region, and the mid- and N-termival parts are conserved independently in other families.	3.25231e-29
NZ_CP048834.1|WP_170017485.1|5873461_5874256_-|cobalt-precorrin-6A-reductase	gnl|CDD|236144	PRK08057, PRK08057, cobalt-precorrin-6x reductase; Reviewed.	5.09552e-95
NZ_CP048834.1|WP_170018304.1|5861149_5862601_-|cobyric-acid-synthase	gnl|CDD|234838	PRK00784, PRK00784, cobyric acid synthase.	0
NZ_CP048834.1|WP_170017476.1|5863393_5863900_-|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	gnl|CDD|376754	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase. This family is composed of a group of bifunctional cobalamin biosynthesis enzymes which display cobinamide kinase and cobinamide phosphate guanyltransferase activity. The crystal structure of the enzyme reveals the molecule to be a trimer with a propeller-like shape.	8.97493e-81
NZ_CP048834.1|WP_170017482.1|5871370_5872015_+|precorrin-8X-methylmutase	gnl|CDD|181352	PRK08285, cobH, precorrin-8X methylmutase; Reviewed.	1.25464e-121
NZ_CP048834.1|WP_170017488.1|5875872_5876631_+|precorrin-4-C(11)-methyltransferase	gnl|CDD|225430	COG2875, CobM, Precorrin-4 methylase [Coenzyme metabolism].	2.16203e-128
NZ_CP048834.1|WP_170017477.1|5863896_5864649_-|CbtA-family-protein	gnl|CDD|227733	COG5446, COG5446, Predicted integral membrane protein [Function unknown].	2.88374e-77
NZ_CP048834.1|WP_170017471.1|5855369_5857187_-|DNA-helicase-RecQ	gnl|CDD|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP048834.1|WP_170017478.1|5864667_5864862_-|CbtB-domain-containing-protein	gnl|CDD|370526	pfam09489, CbtB, Probable cobalt transporter subunit (CbtB). This entry represents a family of proteins which have been proposed to act as cobalt transporters acting in concert with vitamin B12 biosynthesis systems. Evidence for this assignment includes 1) prediction of a single transmembrane segment and a C-terminal histidine-rich motif likely to be a metal-binding site, 2) positional gene linkage with known B12 biosynthesis genes, 3) upstream proximity of B12 transcriptional regulatory sites, 4) the absence of other known cobalt import systems and 5) the obligate co-localization with a protein (CbtA) predicted to have five additional transmembrane segments.	3.96109e-14
NZ_CP048834.1|WP_170017490.1|5878117_5878501_+|DUF423-domain-containing-protein	gnl|CDD|225238	COG2363, COG2363, Uncharacterized small membrane protein [Function unknown].	1.3162e-12
NZ_CP048834.1|WP_170017473.1|5858418_5859732_+|pilus-assembly-protein	gnl|CDD|227296	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion].	6.58632e-07
NZ_CP048834.1|WP_170017472.1|5857275_5858235_+|cobalamin-biosynthesis-protein-CobD	gnl|CDD|377002	pfam03186, CobD_Cbib, CobD/Cbib protein. This family includes CobD proteins from a number of bacteria, in Salmonella this protein is called Cbib. Salmonella CobD is a different protein. This protein is involved in cobalamin biosynthesis and is probably an enzyme responsible for the conversion of adenosylcobyric acid to adenosylcobinamide or adenosylcobinamide phosphate.	1.75606e-110

Protein sequences

>NZ_CP048834.1|WP_170017479.1|5865477_5866524_+|cobalamin-biosynthesis-protein-CobW
MSSDLRKVPCTIVTGFLGSGKTTLIRHVLTEAKGRRLAVIVNEFGDVGIDGEILRGCGNEACPEENIVELANGCICCTVADDFVPALDAILALEPKVEHILIETSGLALPKPLVQAFHWPAIRSRVTVDGVVAVVDGEALAAGRVANDLDALAEQRAGDAALDHDDPIEEVFEDQIACADLVVLTKGDLVDRAGAERAKAVLDASLPRAVRVVSAVAGRLDPAVLLGLGVGTEADIENRRTHHDNELEHDHDDFDSFVINVPEVANPEELSARIARAAEEAGALRVKGFVAVTGKPMRLLVQAVGPRVTQQYDRAWGAGERAGRLVVIGLKGLDRAAVERALGVLEAV
>NZ_CP048834.1|WP_170017478.1|5864667_5864862_-|CbtB-domain-containing-protein
MNTKKTGTQNTATLAVETPASRALAITFAALLGVFVVGGVGFSHISAVHNASHDVRHATAFPCH
>NZ_CP048834.1|WP_170017477.1|5863896_5864649_-|CbtA-family-protein
MSLFRTILFVAALAGIGSGVVAAGIHMVGAVPLILKAETYESAAEATEAPAAQAPVAHAHDAATPAHEHDADEWAPSDGFERNGLTLVFMVLTGFGFGLLLMAASELAGGIDGWRQGILWGFAGFAVFTLAPQLGLPPELPAMPAADLMARQIWWIGTAAATAGGLALLVFGRVPLLAALGVMLILIPHVIGAPQPASFETPIPEGLHHSFVVASVASSFVFWVLLGGLAGWLRPRIAALEANRALARAA
>NZ_CP048834.1|WP_170017476.1|5863393_5863900_-|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase
MKLTFILGGARSGKSRHAEVLVERLPSPWTYVATAEAYDDEMVERIALHRSRRGAGWETIDAPHHLAASLMTVPPERPVLVDCLTLWLSNRMLGDADIEMESAVLEAALLAREAPLFVVSNEVGLGIVPDNTLARRFRDAQGRLNQRIATFADEVVLMVAGLPLKVKG
>NZ_CP048834.1|WP_170017475.1|5862752_5863397_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MSAITPEEITPEEAERHRAKMAKRKAVQDAEVAEKSVEKGLLIVHTGPGKGKSTAAFGLALRTLGRPDEGIGGRVGVVQFIKGAWHSAERDALETFGERVEWHTMGEGFTWETQDLSRDIAAAQRAWAKALELMADERIGLVILDELNIALRYDYLPLDHVVAALSGRRAGLHVVVTGRNAKPALIEAADLVTEMGLVKHHFAAGVKAQKGVEF
>NZ_CP048834.1|WP_170018304.1|5861149_5862601_-|cobyric-acid-synthase
MFQGTGSDVGKSLIVAGLARAFANRGLKVRPFKPQNMSNNAAVTADGGEIGRAQALQARAARVAPSVHMNPVLLKPQSETGAQIVVQGRVHATARAAEYQSIKPTLMPAVLESFARLAHEADLVLVEGAGSASEINLRTADIANMGFARAANVPVVLIGDIERGGVIASLVGTHAVLPADDAAMIRGFLVNRFRGDPALFAAGMEEIARRTGWTSLGLIPFFAGAHRLPAEDALGLDGARPAKPGAKLRIAVPILPRISNFDDLDPLDAEPSVEIIRVKPGSPLPGDAQLVILPGSKSTIPDLAALRANGWDIDLAAHVRRGGHVLGLCGGYQMLGRSIADPDGIEGPAGAVPGLGLLDVETVLSGEKRLAAVTGETTDGIVFVGYEMHMGVTEGPGRARPFCRIGGAPEGAVSPDGRIIGTYAHGLFADDRQRAAWLQRLGAGPAQVAYEDGVEATLDALAAHLEAHIDLDHLLELATPISV
>NZ_CP048834.1|WP_170017474.1|5859912_5861160_+|pilus-assembly-protein
MLAGLLGAFRRCDRGNVAMLFALSAVPMFGAAGMAIDYARAVDGRTQLQIALDGAVLAGAVAPGKEVATAQSFFDAAVAPAKLDGASASFDLASGALTGTAHAVVPSTLLKVMHIDSVEIGANAAVQIGSKGGVCILVLDPSGGQALLANSGAKINAPDCEIHVRSTANPAAIFNAGISLNVKKVCVKGANVIQNGGKLAVVETSCAAIDDPFAGKLPTVSVPGNCTSPQPYNANGADVTLPQGNYCNLNINGANNVYMKPGLFQNVTFNGSSTKIHMDPGLYIFKDTTIVNSGSVMTGTGVTLYFADANSKIQFNGNVTLNLSAPTSGTYKALLIYDLASSGTDWVVNGTAGYKLEGLIYLPKRNVTINSTSNVTADKLSMVVNRLILNNTDWKFSPSDSRPMGGTAGAIALIR
>NZ_CP048834.1|WP_170017473.1|5858418_5859732_+|pilus-assembly-protein
MFLRRLAAFFTDRRGNVGIIFGLTAVPAIGVVGAGIDFARANHERAAMQSMLDSAVLAGVTAAGKEATTAKAFFDAQAAGLNLTDANASFTMGADSTLSGTATGTMETTLLGVMHITTVELGANAAAKVYGAPASSDPASDVGGKVCILLVDPNASQSFLANGGAKITAPDCEIHVRSTANPAAIINGSTDLNVQKICVKGSKVITNGSGKPPVETDCAALDDPYAGKLPTVAVPANCTVSNANYNANGADVDLPSGNYCNVNINGARNVTMRPGLFQNIIFNGSTSIAMAPGLYVFKNSSVVNSGSVMKGTGVSIYFPDANSKIQFNGDVTLNLSAPTGGDYAGVLFFEPTGLSKSSLVFNSTDKSVITGMMYLPSRNVTFNSVSNITAHKVMLVYNTMILNASGWSFSGSDKAIALGSGAGEGDTEVPRRVALVH
>NZ_CP048834.1|WP_170017472.1|5857275_5858235_+|cobalamin-biosynthesis-protein-CobD
MTFGVAALALLIEAAFGYPAWLYRLIGHPVTWIGRLITLLDRHMNRDKDRADTRRFNGTIALIILLFCVGAPVLFIETRLYAVPFGDVVAALAASTLLAQRSLYTHVRRVADGLEHSLDAGRTAVSHIVGRDPEALDEAGVSRAAIESLAENFSDGIVAPAMWTAVAGVTGGALYKAINTADSMIGHRTPRFVDFGRTAAKVDDFVNLPASRLAGALIIAAAFFIPGASARSAWRAMLADAARHRSPNAGWPEAAMAGALGVALAGPRTYGGKLVQDHWMGRDGRRTANAGDIRRALRIYRLADALLIVLVAAIVIILL
>NZ_CP048834.1|WP_170017471.1|5855369_5857187_-|DNA-helicase-RecQ
MTSPHEISAAREAASRRVLKDVFGFDRFRPGQQEVVDAVLAGVPTLAVMPTGAGKSLCYQLPALVLGGLAIVVSPLIALMDDQVAALKLEGVSAEAIHSGRSREANVAAWRRVAAGEVRLLYLAPERLLTERMLTALTRLPLNLIAIDEAHCISQWGHSFRGEYLGLGRLREVFPQVPLVALTATADVSTRDDIVQRLFGGQARVFVSGFDRPNITIGVEDKRSPAEQIESFVRARPGVAGIIYRISRKKVDETAERLSAAGIRALPYHAGMSQEARAANQEAFLAEAGIVMVATVAFGMGIDKSDVRYVLHGDAPGSLEAYYQEIGRAGRDGQPAEARLLYGAGDIATRRRFIDEEASEPERKQVEARRLDAMVGFCEAVTCRRAVLLGYFGERAKPCGACDVCRDPPKVTDASREAALALRIVRATGERFGAAHIAAVVTGQHSEQVTGRGHDRLAEFGTGADRPSPEWRALLRQLIATGALTADAARFGALRLTDIGLAILAGTRAFTLRASAPRRKERPGSAGKGAELEPAAAELLGRLKALRRRLAAEREVPAYVIFPDRTLEEMAVEHPRTRSELAAVKGVGTAKLAAFGAEFLAVLRG
>NZ_CP048834.1|WP_170017481.1|5870082_5871381_+|precorrin-3B-synthase
MSASAMRRGACPTLPAPMATGDGLLARIALAAPMRPSQLTGLAKLSQCCGNGIVELSARGSLQVRGLTSASAPDFAAGVGALGIAVREGLAVETNPLAGLDPMAALDPRPLAQEIAQLALPLAGGLAPKVTVIVDGGGALHLDGLAADIRLTALDADRLALEAGGVALRVVERHEAAGTVFRLLALLAAQGSAARMADLVARSLRPHPEVPPQAASKDVEARQRPSVASILRGSGFARAPQDEVVKETSHQRPPAEPIGIHSLTDGRLALGLGLAFGQTDHAAVAGLAALAERAGASSVATCFGRALLIIGVTEPSADMGRREAAALGFITDPNDPRRSVSACPGRPACASGRIETRALAAELAPLAAGRSLHVSGCAKGCAHPGAADLTIVGVDGGAGLVVEGVPRDAPRLIVLETELAAAAHRILEKHGG
>NZ_CP048834.1|WP_170017482.1|5871370_5872015_+|precorrin-8X-methylmutase
MVAEAHPFDYVRDGAAIYERSFAIIREEADLGRFTPEEADVAVRMIHACGLVEAATAIDFGRGVVRAGRAALQAGAPVLCDAEMVARGITRARLPASNEVICTLRDPAVPRLAEERGTTRSAAALELWRPYLDGAVVAIGNAPTALFRLLEMLEEGAPQPAAILGIPVGFVGAAESKDALAAGDHGVPWLVVRGRLGGSAMTAAAINALARAGI
>NZ_CP048834.1|WP_170017483.1|5872011_5872737_+|precorrin-2-C(20)-methyltransferase
MTGRLIGVGVGPGDPELMTLKAVRALGEADVVAYFAKLGNGSHARATACAHFRVGAEELALGYPVTTEAHRHDEAYRAAITGFYDDSARTVAAHLDAGRTVAVLSEGDPLFYGSYMHLHVRLASRYAAEVIPGVTGMSGCWSQAGTPIAQGDDVLCVLPGTLDEDELARRLREADAAIIMKVGRNLPKIRRALASAGRLQRALYVERGTMEGGHSLPLAERDEAPAPYFAIVLVPGWEARS
>NZ_CP048834.1|WP_170017484.1|5872733_5873495_+|precorrin-3B-C(17)-methyltransferase
MSGRLVVVGLGPGDERFLTPQAAEALAVAEVLYGYEPYLARVPECPGQTRHASDNREELGRARAALEHASSGARVAMVSGGDPGVFAMAAAVIEAIEAGPAKWRALDIEVVPGITAMLAVAAKAGAPLGHDFCAISLSDNLKPWDLVERRVRLAAEAGFVIAFYNPVSKARPWQLGTAFDLLRGVLPAGTPVMFGHAVGRVDERLAVVPLGEARSDMADMATCIIIGSAETRVVEREGMPPLVYSPRSARAAG
>NZ_CP048834.1|WP_170017485.1|5873461_5874256_-|cobalt-precorrin-6A-reductase
MEPGLAIDVSTRRILILGGTTEARLLAERLAARDDINVTVSLAGRTRKPLDMPATIRVGGFGGAGGLAEYLRAEAIDALVDATHPFAATMSFNAAEAARLAGVPLLALARAPWEHQPGDIWREAADVAEAVSLLGATSRRVLVALGRNEVSALEAAPQHAYWVRSVDPVEPPLRLDEAHYIVARGPFPEGEERDLLKRHRIDAVLAKNSGGDATYGKIAAARTLGIEVILVKRPPRPEVPTAGSVEAAMVWLNAHPAALALRGE
>NZ_CP048834.1|WP_170017486.1|5874215_5875484_+|precorrin-6y-C5,15-methyltransferase-(decarboxylating)-subunit-CbiE
MRRVDTSMANPGSIAPDHAPGARWLSIVGIGEDGATGLSPTAQALISEAEIVFGGRRHLALAGDLVRGQAFNWPSPLNDGIAAVLALRGRRVCVVASGDPFFYGVGATLARHVPAAEMRVMPAPSAFSLAAARLGWALQDVVCLSVHGRAVELIRPHLHPGRQILVLTSDGEGPAAVARLLDRDGFGASKMHVLEALGGGRERVRSGCAADLGSEEVDALNLVGIEVVAEEGARIVPLTPGLPDDCFENDGQLTKRDIRAVTLAALAPRRGELLWDIGAGAGSVAIEWMLADPSLRAVAVEERTVRAARVRSNAWSLGVPGLEVVEGRAPAALAGLPIPDAIFIGGGAGDEGVLDSAIAALRPEGRLVVNAVTLETEALLLAKQATLGGELVRIAVSHAAPVGTVTGWRPSMPVTQWRWVKP
>NZ_CP048834.1|WP_170017487.1|5875480_5875876_+|cobalamin-biosynthesis-protein
MTTKFVAGIGSRRGVTAREVRAAVEGAMARYEVKLCDISLMATPALKGSEAGIMTAALDLGLLLVMVPQAQMEAAAARTVSHSDRVVALMGVPSVAEAAALAVAGRRSSLVGPRFVLGSVTCALAREEDKT
>NZ_CP048834.1|WP_170017488.1|5875872_5876631_+|precorrin-4-C(11)-methyltransferase
MSVHFIGAGPGAADLITLRGRDLIARCPVCLYAGSIVPPEMLAWCPPGARIVDTAPLSLDEIEAEYVAADAAGLDVARLHSGDLAIYSAVAEQVRRLERLGIAYTLTPGVPAFAAAAAVLGRELTVPEVAQSVVLTRVSGRASAMPSGETLAAFGATGATLVLHLAIHALERIVAELTPLYGAECPVAVVVEATRPRERVLRGTLSDIAGQVAGEPVERMALILVGPALGAQTFRESALYDAAYQRRFRGRG
>NZ_CP048834.1|WP_170017489.1|5876803_5878114_+|cobyrinate-a,c-diamide-synthase
MTARGLIIAAPRSGSGKTTLTLGVVGALRRRGVKVRAVKSGPDYIDPAFHAAASGRPGLNLDSFAMPPELIDALAGEAAEDADLVIIEASMGLFDGVYGTPERTGAAADLAARLGLPVVLVLDISGHSQSAAAVVRGFATHDPAVRIAGVVLNKSASPRHRAQASEAIGALGIPLLGSLPREAAMTLPERHLGLVQAQEHPALAAHLASLADFAAQHVDLDALMAIGAPVAAGAAPAIAVPPPGQRIALAQDAAFSFTYEHMLAGWRRAGAEVVTFSPLADEAPPEDCDACWLPGGYPELHGARLASASRFRAGMVAFAQTRPVHGECGGYMVLGRTLEDVDHKTHEMLALLKHCTSFARRKLNLGYRQASLLADSPLGPAGTRLRGHEFHYATVTERGDDAPLVALADGQGNEMGHAGSRSGLVSGAFFHVIAME
>NZ_CP048834.1|WP_170017490.1|5878117_5878501_+|DUF423-domain-containing-protein
MNAFRRLLVLFAGLLGAAGVAAAAAAAHMTSDPALATAAQFLMIGAVALAACAALGAAAGGQGWSFSDVGGGLIGLGTALFSGALAARVLWDVSIFPMAAPTGGMVLIVGWLALGLAAFQRGRSATT

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	430664 : 442580	12	uncultured_Mediterranean_phage(81.82%)	tRNA	NA
DBSCAN-SWA_2	611248 : 621564	10	uncultured_Mediterranean_phage(57.14%)	tRNA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP048834|430664:442580|DBSCAN-SWA
CATGCCGACGACGCCCCGCGCCTTCATCACCGGCTGCGCCGGCCCGGTCCTCACTCCTGAGGAAGAGCGCTTCTTCGCGGAGAGCGATCCGTGGGGGCTGATCGTGTTCCGCCGCAATATCGAGACGCCGGGGCAGGTGAGGGCGCTGGTCGCCGCCTTCCGTTCCATCGTCGGGCGCGCTGACGCGCCGGTGCTGGTCGACCAGGAGGGTGGACGCGTGCAGCGGCTGGCGCCGCCGCATTGGCCGGCCTATCCGCCGGCTGCGGGGTTCGCTGCCATAGCGGAGGCCGGCGACATGGCGGGCGCCAAGGCGACGGCCAAGCTCGGCGCGCGGCTGATGGCGGACGATCTCGCGAGCCTCGGCATCAATGTCGATTGCGTGCCGTGCGCCGACCTGCGCCTGCCGGAAGGTCACGGCATCATCGGCGACCGCGCCTATGGCGACACCCCGGCACAAGTGGCGAGCCTCGCCCGCGCTGCCGCGGAAGGTCTGATCGAGGGCGGCGTGCTTCCGGTGCTCAAGCATATCCCCGGCCATGGCCGCGCCCGCGCCGACAGCCATGAGAGCCTGCCGGTCGTCGAGACCTCGCGCAAGGAATTGGAGGCGACCGACTTCGCGCCGTTCCGCCTGCTCGCCGACCTGCCGCTCGGCATGACCGCGCACGTCGTCTATTCCGCGATCGACACGGAGAACCCTGCGACCACTTCGAAGCGGGTGATCGAGGAGATCATTCGCGGCCATATCGGCTTCGATGGTGCACTGATGAGCGACGATCTCTCAATGGGTGCGCTCTCCGGCACGCTGGCGAGCCGGACCGAAGCCGCCTTCATCGCGGGCTGCGATCTCGCGCTCCATTGCAACGGCAAGATGGAGGAGATGGTGCAGGTGGCGTCCCAGACGCCGCAGCTTTCCGGCGAGGCGGCGCGGCGTTGTGCGGCGGCGCTCGACCGGCTCCGCAGCCCCGGCGCCTTCGAGGTTTCGCAGGCGCGCGCGCAATTTTCCGCTATGATCGCGGCGACGTGAACAGGACGCTGCCGGTATAGATGGAGCAGAACGAATTCGCCTTCGAAACGGCTGAGCGCGGCGCGAGCGAGCCCGCGCTCGTCGTCGATGTCGACGGCTTCGAAGGTCCGCTCGACCTGCTGCTGGCGCTCGCCCGCACCCAGAAGGTGGATCTCCACCGCATCTCCATTCTCCAGCTTGCCGAGCAGTACCTCACCTTCGTCGAGGAAGCGCGCAAGGTGCGCCTCGAGCTCGCCGCCGATTATCTGGTCATGGCGGCGTGGCTCGCGTTTCTGAAGTCGCGCCTGCTACTGCCGGAGCCGCCAAAGGAGGATGGGCCGAGCGCCGCCGAGTTGGCCGCCGATCTCGCCGAGCGGCTGCGCCGGCTGGAGCGTATTCGCAGCGCCGCCGCGCATCTCGCTACCCGTGACCGGATGGGGCAGGACGTGTTCCCGCGCGGCCATGCCGAGCCGCTGCACAGCGCAGGGGCCGTGGTCTATGAGGCGGGCCTCTATGACCTGCTCGCTGCCTATGGCGCGCATCGGCAAAGGATTGCGCTCTCCCAGGTGCGCTTCGCGCCCCGTCACGTGCTCTCGCTGGCGGACGCCCGCGAGCGGCTGGAGCGGCTGATCGGCCGGCTGCCGCCGGGTGGCGACTGGGCGCGGCTCGACGGCTTCCTGCTCAACTGGATGGCCGATCCGAAGATGCGCGCCACCGCGCTCGCCTCAGGCTTCTCCGCGACCCTTGAGATGGTGCGCGAGGGGATGATCGAGCTGCAGCAGGATGGCGCCTTCGCGCCAATCTGGATCCGACCGCTCGGTTCCGGTGACGAGGACGGGGCATGAACATGCAGCCCGTCCGCGAGCGCACCGAGGAGCCCCGTCGCGCACCGGCCCTGCGCCTGCTGGAGGCCATGCTGTTCGCCGCGGGCGAGCCGCTGGACGAGGCGACGCTGCTGGCGCGCCTGCCGGAGGGCGCCGACCTGCCAGCCCTGCTCGCCGAGCTTGCCACCGAGTATGCGCCGCGCGGCGTGAACCTCACGCGTGTTGCCGGCAAATGGATGTTCCGCACCGCGCCGGATCTCGGCTTCCTGCTCGCCCGCGACAAGCCGGAGCCGCGCAAGCTCTCCCGCGCGGCGCTGGAGACGCTGGCCATCATTGCCTATCACCAGCCGGCCACCCGTGCCGAGATCGAGGAGATACGCGGCGTCGCCGCCAACAAGGGCACGCTCGACGTGCTGCTGGAGGCCGGCTGGATCCGCATGCGCGGGCGCCGCCGCAGCCCCGGGCGGCCGGTCACCTACGGCACGGCCGAGGGGTTTCTCGTGCATTTCGGCCTCGATTCGATCCAGGATCTGCCGGGCATCGAAGAGTTGAAGGGCACCGGCCTAATCGACGCGCGGGTGCCGGCGGGCTTGACGGTGCCCATACCCAATGACGATGTGACGCTCCAGGATGACGAGGACCCCCTCGAGCCTGACGTGATCGACCTCGGTCTGGTGCCGCGCGCGGTGCCGGAGGACGACGAGGACTGAGCATGTTCCGCAAAAGTTGAATGACTTTTGCGATCAGAACCTGCTCCAGCCCATTGAAACTAGAGCATCTGCCTGCCGTTTCGATGGAACGACAGGCAGATGCTCGAGCCGCCGACGCGGCACCCGCACTGGAGCCGCCTATGTCTGCCGCCACCGCCCGCACCCCGGTCTCGCTCGCCAGCCGCCTCACCATCGATGATGTGCGCCACAGCTACGGCACGGTGGAAGCGGTGCGCGGCGTCTCGTTGACGGTGGAGCCGGGCGAGATCGTCTGCCTGCTCGGCCACTCCGGCTGCGGCAAGACCACGCTGCTGCGCCTCGTCGCCGGTATCGAGCGCCCCACCGGCGGGCGCATCGCCCTCGACCGCATGGTGGTCGCCGGACCCGACGCGTTCGTGCCGCCGGAGAAGCGCAATATCGGCCTGGTGTTCCAGGATTATGCGCTGTTCCCGCATCTCACCAATCTGGAGAACGTCACTTTCGGCCTGCGCAGCCTCAGCCGCGCCCAGGCAGAGGACGAGGCGCGCCGGGCGCTCGCCCGCGTGCGGCTGGAACGCTATGCCGAGGAGTATCCCCACGCGCTCTCCGGCGGCGAGCAGCAGCGCGTTGCGCTGGCCCGCGCGCTGGTGCCGCGGCCGGGCATATTGCTGATGGACGAGCCGTTCTCGGGCCTCGACCGGCGGCTGCGCGACACGGTGCGCACCGAGACGCTGAACGTGCTGCGGGAGGCCCGCGCCACCTGCATCATCGTCACCCATGATCCGGAGGAGGCGATGCGGCTCGGTGATCGCATCGCGCTGATGCGCGGCGGACGCCTCGCCCAGGTTGGTACGCCGGAGGAACTCTATCGCACGCCGTCCGATCTCGCGACCGCGCGCTTTTTCTGCGAGATCAACGAGATCGCGGGGAAGGTCGCGGCCGGGCGGCTCGAGACGCCGTTCGGCAGCTTCGCTGCCAGCGGGCTGGGCGAGGGAGCGGCCGCCGTTGCCGCCATCCGCCCGCAGGGCGTGGAATTGCGTGCGCCGGGCTCCGGGCGTGCGGGGCGCATCGTCGCACACCGTTTCCTCGGGGAACTTGACCTCTACGAGATCGCCGTCGATGGGCTGGACGAGCCGCTGGTATCAAGGCGCCGCGCTACCGCCGGACTCGCGCGTGGCCATGATGTGGGCGTGCACATAGACCCGGCAGAGGTCCTTGTTTTCGCCGCGGGAGAGGCGGGAGCCGGATGACGCTACGCGAAACGTGAAGGGTTTCCGCGAAGCGCCTGAATCTGCCTCCCTTTAAAATGCTAGAGGACAATTTACGTTTGTGGGGAAAGCGATGGCGCTTCCCTGAAAAACGATCGTGCTCTAGTGTCCCAACTGATTTCAGGTACGCCGCCGCAAGGGGCCGGCCGCATACCGTAGAGGAGTAATGTTATGGGTGGTTTGAGCATCTGGCACTGGATCATCGTGCTGGTGGTCGTGCTCCTGCTGTTCGGCCGTGGCAAGCTGTCCGAGCTGATGGGTGACGCTGCCAAGGGCATCAAGGCGTTCAAGAAGGGCATGGCGGACGACGAGGACACGGCGGCGACCAAGCCGGCCGAGCCGACGCGCACCATCGACCATCAGCCCGGCGTCGAAGCCGAGCGCAGCAAGGTCGGCTGATCCGATCCTCGGCCCGAACGGAACGGGGAGGGGCCGCGCCGCGCGGCCCCAGCATGATCTATGTTTGATATCGGCTGGTCCGAGCTTCTCGTCATCGGCATCGTCGCGCTCGTCGTTATCGGGCCGAAGGAGCTGCCGGGAGTCCTGCGCACTGTCGGGCAGATGGTGGGCAAGCTGCGCCGTATGGCAGGCGAATTCCAGGGACAATTCCAGGAAGCGCTGCGCGAGGCCGAACTTGACGGCCTGAAGAAGAGCTTCACCGACTTCACCGAAGACGCGAACAAGAGCATTGCCGGCGCGCTGCCGAGCAATCCGCTGCTTGACCTCGAGAATGAGGTGAAAGCCGCCAAGGACGCTATCGAGGGCCGCAAGGGCGAGCCGGCGACCAAGATCGAGGACGCCGCTGCCCAGGCGACCGGCATCGATCCGGCGACCGCCGCCGTCGAGGCGCAGTTGCCAAAGCCGGAAGAGCCGCCGCCGCTGGAGCCCTATGCGTTCGAGGACATCGTTTCGGGCGGGGCGAAACCCGAAGCGCTGCCAGCGGCCACGACAACGCCGGTCGAAGCCAGGCCGCTGGATTCCAAACTTGATGACGTGAAGCCCGCGACCGTCGAACCGGATGCCGCCGCGGCGCGGGTGGCCATCGAGGGTGCGCCGGCCGATCTGTTTGCCGACGATCTGCCCGCGGCAGTGCCTGCCAAGCCAAAGCGCAAGCCCCGCGTGGCGACGGCGCCGGCCGAGCCGGAGCTGAGCGAGGCGGTCGCGGCGCTGGACGACACCGCGAGCACGGCGGAGAAGCCGAAGCGCAAGCCGCGGGCGCGGGTCAAGACGCCGACTACCGAGACATCAACCGACACGACAACGACTGCCGGCGATGAAGGGCCGGACGCAGCATGAGCCAGGAAGATATCGATGCCTCGAAGGCACCGCTGATCGAGCATCTGATCGAGCTGCGCTCGCGGCTCATCAAGTCGCTCATCGCTTTCTTCGTGGCCTTCTTCGCCTGCTTCATGCTGGGCAAGGTGATCTACAACATCCTGCTGTGGCCGTATGAGTTCGCAGCCGGCGGCACCGAGCACGTGAAGCTCATCTACACCGCGCCGCAGGAATTCCTGTTCACCCAGATCAAGCTCGGCATGTTCGGCGCTGCCTTCATCTCCTTTCCGGTGGTGGCGACGCAGATCTACATGTTCGTGGCGCCGGGCCTCTACAAGCACGAGCGCGGTGCCTTCCGGCCGTATCTGATCGCGACGCCGGTATGCTTTCTGCTGGGGGCATCGTTCGTCTATTTCGTCGCCATGCCGCTGGCGATGACCTATTTCCTCTCCATGCAGCAGGCGGCCGGGCCGGGCTCGGCGGAAATCTCCATGCTGCCGCAGGTGAGCGAATATCTCTCGCTGATCATGACGCTGATCTTCGCCTTCGGCATCTGCTTCCAGCTGCCGGTGATCCTGACGCTGCTGGCGCAGATCGGGCTGGTGACCTCCGAGCAGCTCAAGAAAGCCCGCCGCTATGCCATCGTCGGCGTGTTCATTGCCGCGGCGGTGCTCACGCCACCTGACGTCATCAGCCAGCTCGCACTCGCCATCCCGACCTTGCTTCTCTATGAGGTCTCGGTCTACCTCGTGCGCATCGTCGAGCGCAGGCGCGCGGCGGCAGAGAATGGCGAGGCGTCGAGCCCCGCCGCATAAACGGGATCGAGGCTAAGGCGAGACGTCCATGCACGACATCAAATGGATCCGCGAGGAGCCGCAGGGGCTCGTGCGCGCACTGGTTCGGCGCGGGACGGACGCTTCCGAAGCGCAGGCGCTGGTGGACGCTCTGGTCTCGCTGGACGAGCGCCGCCGGGCCGGCATCGTGAAACTGGAAGAGCTGCAGGCTCGCCGCAATGCCGCCTCCAGGGAGATCGGCGCCGCCAAGAAGGCGAAGGACGAGGCGACGGCCGAAGCGCTGATGGCCGAGGTCGCGAGCCTCAAGGACGGCATCCCGGCGCTCGAAGCCGAGGTGAAGGCGGTCGAGGCCGAGTTGCACGACACGCTCGCCGGCATTCCCAACGTCCCGCTCGATGACGTGCCGGATGGCAAGGACGAGAGCGAGAACGTCTCCTACGAACTTGTGCCGCGGCCCGATCTGCCTTCCGGTGATGTTCCGGTGCCGATGTGGCGTGGCGTGATGGACGACACGCCGGACGCCTATCTGTTCAAGCCCGAACAGCACTTCGAGATCGGCGAAGCGCTGGGGATGATGGATTTCGAGGCGGCGGCCAAGCTCTCCGGCGCTCGCTTCGTGGTGCTGCGGGGCCAGCTTGCGCGGCTGGAGCGCGCCATCGGCCAGTTCTTCCTCGACACCCACACGAGCGAGCACGGCTACACCGAAGTGTCGCCGCCGCTGCTGGTGAAGGACGAGGTGATGTTCGGCACGGCGCAACTGCCGAAGTTCCGCGACGACCAGTTCCGCGCTGGCGATGACTATTGGCTCATCCCCACCGCCGAGGTTCCGCTCACCAATCTCGTGCGCGAATCGATCCTCTCGGAGGAAGAGCTGCCGCTGCGGCTCACCGCGCTCACGCCGTGCTTCCGCGCCGAGGCGGGCGCGGCAGGGCGCGATACCCGCGGCATGATCCGGCAGCACCAGTTCTCCAAGGTCGAGCTGGTCTCCATCACCACGCCCGAGCAGTCGGCGTTCGAGCATGAGCGCATGCTGGCCTGCGCGCAGGCGGTGCTGAAGAAGCTTGGCCTGCATTTCCGGGTGCAGACGCTGTGCACCGGCGACATGGGCTTCGCCTCGGCCAAGACCCACGACATCGAGGTGTGGTTGCCGGGGCAGAAAGCCTATCGCGAGATCTCCTCCTGCTCGACCTGCACCGACTTCCAGGCGCGGCGCATGAATGCGCGCTACCGCCCGAAAGAGGGCAAGCAGCCGCGCTTCGTGCACACGCTGAACGGCTCTGGCGTCGCCGTCGGCCGCGCCATGGTGGCGATCCTCGAGACCTACCAGAATGCCGACGGCTCCGTCGCAATTCCGGAGGCTTTGAAGCCTTATATGGGTGGGCTGAACCGGATCGAGAAAATCGGCTGATGCGCATCCTTGTCACCAATGACGACGGTATTCACGCGCCCGGCCTCGAGGCTTGCGCGCGCATCGCGCGCTCGCTCTCGGACGATGTGTGGGTGGTGGCGCCGGAGTTCGACCAGTCCGGCGTCTCGCATTCGCTGTCGCTGTCCGACCCGCTGCGGCTGCGCCAGGTCGAGGAGCGGCGCTTCGCGGTGAAGGGCACGCCGACCGACTGCGTGATCATGGCGGTGCGGCACATCATGACCGATGTGCGGCCCGACCTGGTGCTGTCCGGCGTCAATCGCGGGCAGAACGTCGCCGAGGACGTCGGCTATTCCGGCACGGTCGCCGGCGCCATCGAAGGCACGGTGCTCGGCATCCCCTCCATGGCGCTGTCGCAGGCCTACGGGCTGGAGACCAGGAGCGCCCCGCCCTACACCGTCGCCGAGCATTTCGGCCCCGGCGTGATCCGCACCTTGCTGGAGGAGGGGCTGCCGCCCGGCATCCTGGTCAATATCAACTTCCCCAACCGGCCGGTCGACCAGGTCGCCGGCGTTGCGGTGACCGCGCAGGGCACGCGCAACCAGGACCTGTTGCGCATCGACCAGCGCAATGACGGGCGCGGCAATCCCTATTACTGGATCGCCTTCGAGAAGCGTCGGTTCGAGACGGTGAACGGCTCCGACCTGCATGCCCTCGACCAGGGCCGCATCTCTGTGACACCGCTACGGCTCGACATGACCGACGAGCCGATGATGACGAAGCTGGCCCAGCGCTTCGGAAGGTAGCGCTTGGCTTGAGCCTCCTTCGAGGCTCGGACATTGCCCGAGCACCTCCTACGTCGTCCTGAGGTGCGAGCGTCAGCGAGCCTCGAAGGATGTTGCAGCAGAGCACCTCTATTCGCTGGCATCGCCGGCCGCAGAGATTAACTATAAGGCCGATCCGTAATGCGAGTGACCTTCGTGCCCGATCCCGAGGCGGACGATGCGCTGGAGCGTGCCGAGCTGTTGCTGACGTTGCGCAAGCGCGGCATACGCGATCCGCTGCTGATGCGCGCCTTTGAACAGGTGCCGCGCGAACGCTTCGTCGATCCTGCCTGCCGCTCGCTGGCCTGGGTCGACCAGGCGCTACCGATCTCCTGCGGCCAGACCATCAGCCAGCCGGCGGTGGTGGCGCTGATGACCGAGGCGCTCGACCTCAAGCCGTCGCATTCAGTGCTGGAGATCGGTACCGGCAGCGGCTACCACGCCGCCATCCTCGGCCAGATCGCCGAGCGGGTTGTGACGCTGGAGCGCTTCCGCACCCTGGCGCAGGCTGCGGCGGAGCGGCTGAGGCGGCTCGGCTATACCAATATCGAGGTGGTCGTGGCCGATGGCTCGGCCGGCTACGCGCCGCGCGCGCCCTATGACCGGATCATCATCACGGCCGCAGTGAATGAGGTGCCGCCCGCGCTGTTCGACCAGTTGCGGCAGGGTGGGGTGCTGGTCGCCCCGGTGGGTCCGCCACAGGACACGCAGATGCTCACCCGCTTCGCGCTCACCGCCGACGGCATCGTCAAGCGCGAGATGGTGCCGGTGCGCTTCGTGCCGCTGCTGAAGGGCGTGGCGCAGGTGCTGTGAGGGCAGGGCGCTCGGTTTGAGCATCCTTCGAGGTTCGCTTCGCTCACGCCTCAGGATGACGTGGTTTTTAGAGCGACCTCATCCTGAGGTGCCGGCCAACGGCCGGCCTCGAAGGATGCTGAAGCCGAGCGACCCGCCTCCGTCGACTCACGTCGCGACTGTGTCTTTTTCGCAACCGTCAATCCGCAAGTCGCCGCGAATCCGCCCGAATCTTTTCCCGCCGCTGCGTCGTTTAAACCCGTGTTTACCTATACGCCCCCTTAATGCGGACGTGTGTAGCGTTCGGGTGTGGTGCGATGCGTAGCTTTCCAATGTCGGGTTCGGCGCCCTTGGTGCGGCTTGCCGCAGTAGCCCTTCTGGCCGGTACGGCCGCCGCGTGCAGCGCCGATACCAACCGGTTCAGTGATCCCAATTCCAACCCGTTCGCCGCCAGCGACCGCATGGCTCCGGCCTATACCGGCTCGGTGGGCTCGGCGCCGACCGCGGCGGTGCAGAGCGCGCCGATGAGCGCTCCGGGCGGCTACCAGCCGGCTCCGTCCTACGGCGCGCCGGCGCAGATCTCTCCGCAGGGCGGCCAGCCGTATGGCGGCTCGCCCTATGGCGCGGCAGCCCCGGCGGCTCCGGCTTCCTACGCTTCCAATCCGCCGCCGGCGGCGCAGCCGATCTACGGCGCCCGCCCGCAGACCTTGTCTGCGCCCCATGCATCCGCCGCCCCCGCGCGGACGCCCGTGGCCTCGGCCGGCGGCGGCACTCATGTGGTGACGTCCGGCGAGAGCCTGACCTCCATCGCCCGTCTCTATGGCGTGCCGCGCACGACGCTCGCCCAGACCAACAAGATGGACGTCAACGGCTCGGTCCGCATCGGCCAGCGCATCACCATCCCGGGTTCCGGCTCGCTGGCGGCGAATGCTGCCAAGCCGGCAGCAACGACGGCTGCTCCTGCCGCGCACGTGGCTGCCAAGCCTGCCACGACCGCTCCGGTGGTGGCTGCAGCTCCGGCCAAGCCGAAGCCGGGCGACAACAAGGCGGTGGGGCAGGTCGCAGCGGCCGGCGCCGCCGACAAGAATGCCCAGCTCATCGCCGCGGTGAAGCCGGCGGAGCCCGCCGAAGACGCGGTGAAGGATGACGACAAGCAGGCCGGCATGCAGTTCCGCTGGCCGGTGCGTGGTCGCATCATCTCCGGCTTCGGCCCGAAGCCGGGCGGCCAGCAGAATGAAGGCATCAATGTCTCGGTGCCGGAAGGCACGTCGGTCAAGGCCGCCGAGGACGGCGTCGTCGCCTATGCCGGCAATGAGCTGAAGGGCTACGGCAATCTCGTGCTCATCAAGCACGCCGACGGCTGGGTGACGGCTTATGCCCACAACAGCGAGATCGACGTGAAGAAGGGCGAGACGGTGAAGCGCGGCCAAACCATCGCCAAGGCCGGCCAGACCGGCTCGGTGACCTCGCCGCAGGTGCATTTCGAGATCCGCAAGGGCTCGCAGCCGGTCGATCCGAGCTCCCACCTCGCCGGGCTCTGAGCCGAACGAGGATTAAAAAAGAAAGGGCTCGGAACACCGAGCCCTTTTTCGTCAGTGCCTTGTGGCGCTGGCGAGTGGACACCGGCGCGACGTCTGGACCTTGGCGCCGGTCACTGCGGGGCGGCCGGCTTCTCCGTCAGGGCCACGCCGAGCCGCCCCGCCACATCCTGCACATATTGGAACGCGGTGCGGCCCGAGCGCGCGCCACGCGTGGTCGCCCATTCCAGCGCCTCGCGGCGCAGTTCGTCGGCATCGATCCGGATGCCGAAATGCGCGATATAGCCGTTCACCATCGCCAGATATTCGTCCTGGCTGCATTTGTGGAAGCCGAGCCACAGGCCGAAACGATCTGAAAGGGAGACCTTTTCCTCCACCGCTTCGCCGGGATTGATGGCGGTCGAGCGCTCATTTTCCATCATGTCGCGCGGCAGCAAATGCCGGCGGTTCGACGTGGCGTAGAAGATGACGTTCTCCGGCCGCCCTTCGATGCCGCCTTCCAGCACCGCCTTCAGCGACTTGTAGGAGGTGTCGTCGGCGTCGAAGGAGAGGTCGTCGCAGAACACGATGAAGCGGAAGGCCGAAGGGCGCATCAGCGCCATCAGGGCCGGCAGGGTCTCGATGTCCTCGCGGTGGATTTCCACCAGCTTGAGCGGTGCCTTGCCGTCCTTGCCGAGGTCGGCGTTGACCGCCGCATGGGCGGCCTTGACCAGCGAGCTCTTGCCCATGCCGCGCGCGCCCCACAGTAGGGCGTTGTTGGCGGGCAGGCCGCGGGCGAAGCGGGTGGTGTTGTCCACCAGCACGTCGCGGGTGCGGTCGATGCCCTTCAACAGCTCCATGTCGACCCGGTTGACCTTCGCTACCGGCTCCGGGCGGCCGGAATCGGCGTGCCAGACAAACGCATCGGCGGCGGCTAAGTCGACATTCGCCGCGCGCGGCGGGGCGAGACGGTCGAGCGCGTCGGCGATACGGACGAGCAGAAGGCTGAGATCGGCGGCATCCGGGGAAGCGGTGGTCATGTGAGGCTCCTTGCCGGCCGGGAGATACCGGGCGCGGCGTTTGCCTGCAAGTGAAGGCGCCATCTTCCGTAACGTGATCTGTCCGGCTTTATCTGCGTTTGCAAACCGCAGGCGCGTCAGTATAGTCCGCGCCGCTTCGCCGGGCGGTTCGCGCCCGTCACGTATTTCGACGGACAAGGGACTTCCATGTTCATTACGCCCGCCTATGCGCAGGCCGCCGGCCCGGACGCCACCAGTTTCATCACGTCCATCATTCCCTTCGTGCTGATCTTCGTGATCATGTATTTCCTGATCCTGCGTCCGCAGCAGCGCAAGGTGAAGGCGCACGGGGAGATGGTGAAGGGGGTCCGCCGCGGCGACACCGTCGTCACCTCGGGTGGCCTCATCGGCAAGGTGTCGCGCGTCATCGACGACAATGAGATCGAACTTCAGCTCGCGGACAATGTGAAGATCCGCCAGCTCCGTTCGATGATCTCGGACGTGCGCGCCAAGGGTGAGCCGGCCAAGGACGAAGGCGCGGCCTGA

Protein sequences of DBSCAN-SWA_1

>NZ_CP048834|430664:442580|441149_442055_-|WP_170009394.1|DBSCAN-SWA
MTTASPDAADLSLLLVRIADALDRLAPPRAANVDLAAADAFVWHADSGRPEPVAKVNRVDMELLKGIDRTRDVLVDNTTRFARGLPANNALLWGARGMGKSSLVKAAHAAVNADLGKDGKAPLKLVEIHREDIETLPALMALMRPSAFRFIVFCDDLSFDADDTSYKSLKAVLEGGIEGRPENVIFYATSNRRHLLPRDMMENERSTAINPGEAVEEKVSLSDRFGLWLGFHKCSQDEYLAMVNGYIAHFGIRIDADELRREALEWATTRGARSGRTAFQYVQDVAGRLGVALTEKPAAPQ
>NZ_CP048834|430664:442580|436565_437924_+|WP_170009388.1|tRNA|DBSCAN-SWA
MHDIKWIREEPQGLVRALVRRGTDASEAQALVDALVSLDERRRAGIVKLEELQARRNAASREIGAAKKAKDEATAEALMAEVASLKDGIPALEAEVKAVEAELHDTLAGIPNVPLDDVPDGKDESENVSYELVPRPDLPSGDVPVPMWRGVMDDTPDAYLFKPEQHFEIGEALGMMDFEAAAKLSGARFVVLRGQLARLERAIGQFFLDTHTSEHGYTEVSPPLLVKDEVMFGTAQLPKFRDDQFRAGDDYWLIPTAEVPLTNLVRESILSEEELPLRLTALTPCFRAEAGAAGRDTRGMIRQHQFSKVELVSITTPEQSAFEHERMLACAQAVLKKLGLHFRVQTLCTGDMGFASAKTHDIEVWLPGQKAYREISSCSTCTDFQARRMNARYRPKEGKQPRFVHTLNGSGVAVGRAMVAILETYQNADGSVAIPEALKPYMGGLNRIEKIG
>NZ_CP048834|430664:442580|433340_434429_+|WP_170009382.1|DBSCAN-SWA
MSAATARTPVSLASRLTIDDVRHSYGTVEAVRGVSLTVEPGEIVCLLGHSGCGKTTLLRLVAGIERPTGGRIALDRMVVAGPDAFVPPEKRNIGLVFQDYALFPHLTNLENVTFGLRSLSRAQAEDEARRALARVRLERYAEEYPHALSGGEQQRVALARALVPRPGILLMDEPFSGLDRRLRDTVRTETLNVLREARATCIIVTHDPEEAMRLGDRIALMRGGRLAQVGTPEELYRTPSDLATARFFCEINEIAGKVAAGRLETPFGSFAASGLGEGAAAVAAIRPQGVELRAPGSGRAGRIVAHRFLGELDLYEIAVDGLDEPLVSRRRATAGLARGHDVGVHIDPAEVLVFAAGEAGAG
>NZ_CP048834|430664:442580|438847_439519_+|WP_170009392.1|DBSCAN-SWA
MRVTFVPDPEADDALERAELLLTLRKRGIRDPLLMRAFEQVPRERFVDPACRSLAWVDQALPISCGQTISQPAVVALMTEALDLKPSHSVLEIGTGSGYHAAILGQIAERVVTLERFRTLAQAAAERLRRLGYTNIEVVVADGSAGYAPRAPYDRIIITAAVNEVPPALFDQLRQGGVLVAPVGPPQDTQMLTRFALTADGIVKREMVPVRFVPLLKGVAQVL
>NZ_CP048834|430664:442580|434618_434846_+|WP_170009384.1|DBSCAN-SWA
MGGLSIWHWIIVLVVVLLLFGRGKLSELMGDAAKGIKAFKKGMADDEDTAATKPAEPTRTIDHQPGVEAERSKVG
>NZ_CP048834|430664:442580|435739_436537_+|WP_170009386.1|DBSCAN-SWA
MSQEDIDASKAPLIEHLIELRSRLIKSLIAFFVAFFACFMLGKVIYNILLWPYEFAAGGTEHVKLIYTAPQEFLFTQIKLGMFGAAFISFPVVATQIYMFVAPGLYKHERGAFRPYLIATPVCFLLGASFVYFVAMPLAMTYFLSMQQAAGPGSAEISMLPQVSEYLSLIMTLIFAFGICFQLPVILTLLAQIGLVTSEQLKKARRYAIVGVFIAAAVLTPPDVISQLALAIPTLLLYEVSVYLVRIVERRRAAAENGEASSPAA
>NZ_CP048834|430664:442580|431707_432511_+|WP_170009380.1|DBSCAN-SWA
MEQNEFAFETAERGASEPALVVDVDGFEGPLDLLLALARTQKVDLHRISILQLAEQYLTFVEEARKVRLELAADYLVMAAWLAFLKSRLLLPEPPKEDGPSAAELAADLAERLRRLERIRSAAAHLATRDRMGQDVFPRGHAEPLHSAGAVVYEAGLYDLLAAYGAHRQRIALSQVRFAPRHVLSLADARERLERLIGRLPPGGDWARLDGFLLNWMADPKMRATALASGFSATLEMVREGMIELQQDGAFAPIWIRPLGSGDEDGA
>NZ_CP048834|430664:442580|442241_442580_+|WP_170009396.1|DBSCAN-SWA
MFITPAYAQAAGPDATSFITSIIPFVLIFVIMYFLILRPQQRKVKAHGEMVKGVRRGDTVVTSGGLIGKVSRVIDDNEIELQLADNVKIRQLRSMISDVRAKGEPAKDEGAA
>NZ_CP048834|430664:442580|430664_431687_+|WP_170009378.1|DBSCAN-SWA
MPTTPRAFITGCAGPVLTPEEERFFAESDPWGLIVFRRNIETPGQVRALVAAFRSIVGRADAPVLVDQEGGRVQRLAPPHWPAYPPAAGFAAIAEAGDMAGAKATAKLGARLMADDLASLGINVDCVPCADLRLPEGHGIIGDRAYGDTPAQVASLARAAAEGLIEGGVLPVLKHIPGHGRARADSHESLPVVETSRKELEATDFAPFRLLADLPLGMTAHVVYSAIDTENPATTSKRVIEEIIRGHIGFDGALMSDDLSMGALSGTLASRTEAAFIAGCDLALHCNGKMEEMVQVASQTPQLSGEAARRCAAALDRLRSPGAFEVSQARAQFSAMIAAT
>NZ_CP048834|430664:442580|437923_438688_+|WP_170009390.1|DBSCAN-SWA
MRILVTNDDGIHAPGLEACARIARSLSDDVWVVAPEFDQSGVSHSLSLSDPLRLRQVEERRFAVKGTPTDCVIMAVRHIMTDVRPDLVLSGVNRGQNVAEDVGYSGTVAGAIEGTVLGIPSMALSQAYGLETRSAPPYTVAEHFGPGVIRTLLEEGLPPGILVNINFPNRPVDQVAGVAVTAQGTRNQDLLRIDQRNDGRGNPYYWIAFEKRRFETVNGSDLHALDQGRISVTPLRLDMTDEPMMTKLAQRFGR
>NZ_CP048834|430664:442580|439830_441039_+|WP_170017860.1|DBSCAN-SWA
MSGSAPLVRLAAVALLAGTAAACSADTNRFSDPNSNPFAASDRMAPAYTGSVGSAPTAAVQSAPMSAPGGYQPAPSYGAPAQISPQGGQPYGGSPYGAAAPAAPASYASNPPPAAQPIYGARPQTLSAPHASAAPARTPVASAGGGTHVVTSGESLTSIARLYGVPRTTLAQTNKMDVNGSVRIGQRITIPGSGSLAANAAKPAATTAAPAAHVAAKPATTAPVVAAAPAKPKPGDNKAVGQVAAAGAADKNAQLIAAVKPAEPAEDAVKDDDKQAGMQFRWPVRGRIISGFGPKPGGQQNEGINVSVPEGTSVKAAEDGVVAYAGNELKGYGNLVLIKHADGWVTAYAHNSEIDVKKGETVKRGQTIAKAGQTGSVTSPQVHFEIRKGSQPVDPSSHLAGL
>NZ_CP048834|430664:442580|432513_433200_+|WP_170017859.1|DBSCAN-SWA
MQPVRERTEEPRRAPALRLLEAMLFAAGEPLDEATLLARLPEGADLPALLAELATEYAPRGVNLTRVAGKWMFRTAPDLGFLLARDKPEPRKLSRAALETLAIIAYHQPATRAEIEEIRGVAANKGTLDVLLEAGWIRMRGRRRSPGRPVTYGTAEGFLVHFGLDSIQDLPGIEELKGTGLIDARVPAGLTVPIPNDDVTLQDDEDPLEPDVIDLGLVPRAVPEDDED

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_170009378.1|430664_431687_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	2.5e-25	44.3
WP_170009380.1|431707_432511_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	3.2e-31	35.9
WP_170017859.1|432513_433200_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.2e-40	49.4
WP_170009382.1|433340_434429_+	ABC transporter ATP-binding protein	F2Y165	Organic_Lake_phycodnavirus	2.3e-08	26.2
WP_170009384.1|434618_434846_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	1.2e-07	65.1
WP_170009386.1|435739_436537_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	4.5e-46	44.0
WP_170009388.1|436565_437924_+|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.9e-99	45.9
WP_170009390.1|437923_438688_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	5.3e-36	37.8
WP_170009392.1|438847_439519_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.1e-28	47.6
WP_170017860.1|439830_441039_+	M23 family metallopeptidase	Q8SBN9	Clostridium_phage	2.3e-17	41.8
WP_170009394.1|441149_442055_-	ATP-binding protein	NA	NA	NA	NA
WP_170009396.1|442241_442580_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	5.1e-15	42.9

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP048834|611248:621564|DBSCAN-SWA
CGTGTCCGAATCCGACGCCAGCAATCCAGGGGAAGGTGGTCCCTCGGACATCCGGCCTGTCTCGATCACCGACGAGCTGTCGCGCAGCTATCTCGATTACGCCATGAGCGTGATCGTCTCGCGCGCGCTGCCCGACGTGCGCGACGGTCTCAAGCCGGTGCACCGGCGCATCCTGTTCTCGATGCGCGAGAACAACTACACGCCTGACCGCGCCTACAACAAATCCGCCCGCGTCACCGGCGACACGATGGGTAAGTACCATCCGCACGGCAACCAGGCGATCTATGACGCGCTGGTGCGTCTCGCGCAGGAATTCTCCATGCGCCTGCCGCTGATCGACGGCCAGGGCAATTTCGGCTCGGTGGATGGCGATCCGCCGGCGGCCGAACGCTACACCGAGGTGCGGCTGGCGCGTCCGGCCATGGCGCTGCTCGACGACCTCGACAAGGACACGGTCGACTTCCAGGACAATTATGACGGGCGCGAGCAGGAGCCGACCGTGCTCCCCGCCCGCTTCCCGAACCTGCTGGTCAATGGCGCCGGCGGCATCGCGGTGGGCATGGCCACCAATATCCCGCCGCACAATCTCGGCGAGGTGGTCGATGCCTGCATTGCCCTGATCGACGAGCCGGACATGGAGATCGAGCGGCTGCTCGACCTCATCCCCGGCCCGGATTTCCCGACCGGCGCCCTGATCCTCGGCCGCAGCGGCATCCGCCAAGCATACCTCACCGGCCGCGGCTCGGTCGTCATGCGCGCGCGCGCTACCATCGAGACGACGCGGCGCGAGCGCGAAGCCATCATCATCACCGAGATTCCCTATCAGGTGAACAAGGCGACGATGATCGAGCGCATGGCCGAGCTGGTGCGCGAAAAGCGCCTCGAAGGCATCGCCGAGATTCGCGACGAGAGCTCGCGCGAGGGGATGCGCGTCGTCATCGAGATCAAGCGCGACGCGCAGGCTGACGTCGTGCTGAACAATCTCTACCGCATGACGGCGCTGCAGACCTCGTTCGGCGCCAATATGGTGGCGCTGAACGGCGGCAAGCCGGCGCTGATGACGCTGCACGACCTGCTGACCGCCTTCGTCGCCTTCCGCGAGGAGGTGATTAGCCGGCGGACGAAATTCCTGCTGCGCAAGGCGCGCGACCGGGCCCACGTGCTGGTCGGCCTCGCCATCGCAGTGGCGAACATCGATGAGGTGATCCGCACCATCCGCACCTCGCCGGACCCGGCGACCGCGCGCGATTTGCTGATGGCGCGGCATTGGCCGGCCCATGACGTCGCGCCGCTGATCGTGCTGATCGACGATCCGCGCCACCGCATCGCCGAGGACGGCACCTATCGGCTTTCCGCGGAACAGGCGCGGGCGATCCTCGATCTGCGCCTGCAGCGCCTCACCGCGCTCGGGCGCGACGAGATCGCCGACGAACTCGACAAGATCGCGGTGGAGATCCGCGAATATCTGGAGATCCTGGCCAGCCGGGCGCGCATCCGCAGCATCGTCAAGGACGAACTGCTTGCGGTGAAGACCGATTTCAATACCCCGCGCCGTACCGAGATCGTCGAGGCCGAAGGCGATTTCGAGGACGAAGACCTCATCGCTCGCGAGGATATGGTCGTCACCGTCTCGCACGCCGGCTATGTGAAGCGCGTGCCGCTCTCGACCTATCGGGCGCAGCGCCGCGGCGGCAAGGGCCGTGCGGCGATGCAGACCCGCGACGAGGATTTCGTTACCCGGCTGTTCGTCGCCTCGACGCACGCCCCGGTGCTGTTCTTCTCGTCCAAGGGGCAGGTCTACAAGCTGAAGGTGTGGCGCCTGCCCATCGCCGCGCCGCAGGCGCGCGGCAAGGCGCTGGTCAACATCCTGCCGCTCGATGCAGACGAGCGCATCACCTCGATCATGGCGCTGCCGGACGAGGAGGTGTGGAGCGGGCTGCAGATCATGTTCGCCACCACCGGCGGCACGGTGCGGCGCAACGAGCTGTCCGACTTCACCAATGTGAACCGCAACGGCAAGATCGCGATGAAGCTGGAGGAGGGCGAGGCAATCGCCGACGTCCAGCTCTGCAGCACCGCCGACGATGTCTTGCTGACCACGGCCCATGGCCAGTGCATCCGCTTCCCGACCACCGAAGTGCGCGTGTTCAAGGGACGCGATTCCATGGGCGTGCGCGGCATCGCGCTGGAAGGCGACGACCGGGTGATCGCGATGTCGATCATCCGCCATGTCGAGGCCAACTCCGAGGAGCGCGCCGGCTACATCAAGATGGCCAATGCCGTGCGCCGCAGCCAGAGCGGCGCGGAGAACGGTGTCGAAGAGGTCATCGAGACGGATACGGAAGAAGAGGGCGGGGCCGAGGGCGGCGGCTTGTCGGCGTCGATCGACCAGGCGCGCTATGTCGAGATGGGCGCGGCCGAGCAGTTCATCCTCACCCTCTCGGAGAATGGCTACGGCAAGCGGTCTTCGTCCTTCGAGTACCGCATCACCCGTCGTGGCGGCAAAGGCATCGTCGCCATGGCGGTGAATGACCGCAACGGGCCGCTGGTGGCGTCCTTCCCGGTGGAGGAGAGCGACCAGATCATGCTGGTGACCGACGGCGGCCAGCTCATACGCTGCCCGGTGAACGGCATCCGCATTGTCGGGCGCGGCAGCCAGGGTGTCATCGTCTTCGATACCGCCGACGACGAGAAGGTGGTCTCGGTCGAACGCGTTACCGAGGAAGAAGACTCCGAGGCTGGCGAAGCGGCGGACGAGGCCGCGCCGGAGTAAGCGGCGCGGCCCACATGCTGCAACTTTAATTTGTAGCGCGACGGAACCCGGAGGCGGCCAATCGGTTTGGCCGTCCGTAACGGGGACGTTGTCCGATGCCGACCGTGCTCAATACCACCGTGCCAAAGGTGCCTTTGTGGGGTCACGCCGGCGCGCGCCTGCCTTTGCTGGACGACGAGGCGGCCGCGATCAAGCTGGCCGTGTCGCACCTCACCTTTCGCTATGGGCAATTCACGGCGCTGAAGGGCGTCAGCGTACCCATCGCCGCCAACAAGGTCACCGCCTTCATCGGCCCGTCCGGCTGCGGGAAATCCACGCTTTTGCGCGCGCTCAACCGCATGCACGACCTCTATCCGGACCAGCAGGTCGAGGGCGAGGTCTGGATGGGCGGCGAGAACATTCTCGATCCGTCGGTCGACGTGCTCACGCTACGCCGGCGCATCGGCATGGTGATGCAGCGGCCCACCCCGTTCCCGATGTCGATCTACGACAATGTGGCGTTCGGCATGCGCCTGAATGAGGAACTCGACCACTCGGAGCTGGATGAACGCGTCGAGATGGCGCTGCGCCGTGCCGTGCTCTGGGATGAGGTGCGCAACATTCTGCGCCGGAGCGCGCTCAGCCTCTCCGGCGGCCAGCAGCAGCGCCTGTGCATCGCCCGGACCATAGCGGTCAGGCCGGAGGTGATCCTGCTCGACGAACCGTGTTCGGCGCTCGATCCGATCTCCACGGCGCGGGTGGAGGAGACCGTCGAGGAGCTGAAGAGCGACAGCACGGTGGTGATCGTCACCCACAACATGCAGCAGGCGGCGCGGATTTCCGACTACACCGCCTTCCTGTATCTGGGCGAACTGGTGGAGTTCGGCCCCACCGGGCGGATCTTCGCCAATCCGCGCGACGCCCGTACCGATCGCTACGTCACCGGCCGGATGGGGTAGAGCATCTCCCCATCAGATGGAATCATCCGATCGAAGAGGAGTTGCTCCAGCGTATTGAATCTAGAGCACTCATCTGTCGTTCGGATGTTTCCAACCGAATGGAAAGGGCTCTAGAGGCGGTCAGGCGCGCCCGTCAAGAATACCGGCCACCACGGCGCCGGCCTTTTCGCAATCGGCGCGGCTGACGTCGAGATGCGTCACCATGCGCAGCATGCGCGGGCCGAAGGCGAGCAGCAGCACGCCCTGCTGCCTGGCGCGGGCGATCACCTCGGCATCGGGCGGCGCCTCTGGGCGGGTACGGAACACCACGATGTTGCTCTGGACGGTCGCGAGGTCGAAATCGGCGTTGCGGGCGCCGCTAATGTGCTCGCCGATCAGCCGCGCATTGGCGTGGTCCTCGGCCAGGCGCTCCATGTGGTGGTCGAGTGCATAGAGTCCGGCGCCGGCCAGGATGCCGGCCTGGCGCATGGCGCCGCCGAACAGCCGCCGCTGCCGGCGCGCAGCCACCATGTCCTCGCTGTTGCCGGCGATGACACTGCCGACCGGACAACCCAGCCCCTTGGAAAGCGCGATGCTGGCCATGCGAAACGGCGCCGCCAGCTCGCGCGGGGTCTTGCCGGTCGCTACCGCCGCATTGAACAGCCGGGCGCCGTCGAGATAGGTGGTCATGCCGAGCTCGCCGGCCGTGACGCACACGTCTTCGACCAGTGTTTGTGGGAACACCACGCCGCCGCCGCGATTATGAGTGTTCTCGATCACCACCAGCGTGGTCGCCGGAAACACCATGTGGCCGCGCGGCTTGAAGGCGCCGCGCAGTTCGTCCGCGGTAAAGATGCCACTGGTGCCGAGCGCGATGATCTGCACGCCGGCATTGGCCGAGGCGCCGCCCGCCTCGTGCCAGAGCAGGTGGGCCTCACCACCGGTGATGACCTCCTCGCCCGGCCGGGTCAGCACCTTCACGGCGATCTGGTTGGCCATGGTGCCGCTCGGCACGAACACCGCGGCCTCTTTGCCGAGCAACTCGGCGATGCGGGCCTCCAGCGCATTGACCGAGACGTCCTCGCCATATTGGTCGTCGCCGACCGGAGCGTTGGCCATGGCCTGGCGCATGGCGTCGGTCGGGCGGGTGAGGGTGTCGGAACGCAGATCGATCAGACGGTCGGCCACGGGCGCTTCCTCGGCTTGTGGGACGGCGCCGTTCTAGCGGTACGGAGCCGGCGCGCCAATCGCCGTCCGCCGATTGTCATGGCGAGCAGCGATATTGCGAGGAATCGCGGTCGTGGCTAACGCATGGGCATGTCCATGGAGCGGCGAAATGCGGTTACTCCTCTGTCTGGTGCTGCTGGCCGGCATGTTCGCGACATCGGCAGGCGCGACCGACGCCGTCGGCTTCCGCCGCCTGCGCATAAATGATCCGGTCCGGCCGCTCGGTGCCGTGATCGCGCTCGATCTCGGCTTGGCCCGCGGCTTCGATCCCGACAGCCTTGCCCATTTCACCGTTCCGGTGCTGGTGATCGCCGCCGGCAATTCGGGCGAGAATATCCCGGCAGCAATGGAATCCGGCTACCTCGCCGCGCATTTGCCGAAATCGACGACGCGCTTCGTCACCGCTTCCCGCGCCGCGCATTTCAGCTTCCTGCCGCTCTGCAAGCCGGGCGCTGTCGCGCTGCTGGAGACCGACAAGCCCGGCGACGGCATGGTCTGCCGTGACGGCGAAGAGGGGCGCCGCGCTGGCGTGCACCAGGAGACCATTGCGGAGGTGATCCGCTTCCTCGCGGCGCCGCCGAATTAGAGCGCAGAAGCGGGCAAGCTTGCGCACAAGCCATTCCGCAGCTAACCCTTGCGCGCACACAAAGCAGCAGCCCGAGGCACGCCCGCAGGCATGAGCGCACGCATCGCCTTCTATCCCGGCTCGTTCGATCCACCCACCAACGGCCATGTGGAGGTCGCGCGCGCGGCCGCGCGCCTCGCCGACCGGCTGGTGGTCGGGGTCGGGGTGCATCCCGGCAAGGCGCCGATCTTCAACGCGCCCGAGCGGCTCGACATGCTGCGCGAGGTGTTCACCCCCGTCGCCGCCGAGGCCGGCGCCGCGCTCGACTGCGTGACCTTCGACGATCTGGTGGTCGACGCCGCCCGGCGCGAAGGCGCCAGGCTGCTGATCCGCGGGCTGCGCGACGGCACCGACCTTGACTACGAGATGCAGATGGCCGGCATGAATGCCGTGCTGGCTCCGGACGTGCAGACCGTGTTCCTGCCGGCTTCCCCCATTGCCCGTCCCATCACTGCAACCCTTGTGCGGCAGATCGCGGCGATGGGAGGAGACGTTTCCGCATTCGTGCCGCCCGCGGTTCTCGTGCGGCTGCGCGAACGTTTCGGCCGCGGAACTTGATTGCCGGGTGATGCCTGATCGCCGCGCACTATCTGATCCGCTGCGGGCGAGGCGCCCGCGATCCGCTCAACGGAGTTTTCCATGTTCCGACGCCTGATGACCGCCGCGACCCTGCTGCTCGCCCTCGCTCTGCCGGCGGCCGCACAGACCAAGAAGCCGGATCCGCAGAACACCATCATTATGCAGACGACCAAGGGCCCGGTCGTCATCGCGCTGCGCCCGGACATCGCGCCGAAGCATGCCGAGCGCATCAAGCAGCTCACCCGCGAGGGCTTCTATGACAATGTGCCGTTCCACCGCGTGATCGAGGGCTTCATGGCCCAGACCGGTGACGGCGAATTCGGCAACGGCACCGGCGGCTCCAAGCATCCGGACCTGCCGGCCGAATTCTCCAAGGTGCCGTTCAAGCGCGGCACTCTGGGCATGGCGCGCGCGTCCTCCCCGGACAGCGCCAATTCGCAGTTCTTCATCTGCTTCGGCGACGCCTCGTTCCTGAACGGCCAGTACACCGTCATCGGCGAGGTGATCTCGGGCATGGAGAATGTCGACAAGATCAAGCGTGGCGAGCCGGTGGTTAACCCCGACAAGATCGTGTCGATGAAGGTCCAGGCGGACGTGAAGTAACGCCGCGGCGACCGACCTAAATCAAAGGAGAACAAGATGAGCGATGCAGAGAACACGCTGGTGCTGGAGACCACGCAGGGCCCGGTGAAGATCAAGATGCGCCCGGACCTCGCTCCCGGCCACGTCGCCCGTATCACCACGCTGGTCAATGACGGCTTCTATGACGGGGTGGTGTTCCATCGCGTGATCGAGGGCTTCATGGCACAGACCGGCGATCCCACCGGCACCGGCCGCGGCGGCTCGGGCGTGAAGCTCAAGGCCGAGTTCAACAAGGGCCGCCACCAGCGCGGCACCGTCTCCATGGCCCGTGCGCAGGATCCGAACTCCGGCGACAGCCAGTTCTTCATCTGCTTCGGCGACGCCTCCTTCCTCGACGGCCAGTACACCGTTTGGGGCGAGGTGATCGAAGGCATGGAGAATGTCGACAAGATCAAGCGCGGCGAGCCGGTGCAGAACCCCGACAAGATCGTCTCCGCCAAGATGGCGGCGTGATCGGAATCATAATTTAAGTCGTCATCCCGGAACGGCCGCCAGGCCGTATCCGGGATCGCGAACGAAATTGGTGGGGAGGGGAAGTCCATCCTTCCCAAATTCCCTCATGGCCGGGCTCGACCCGGCCATCCAGGAGGCCAGGCGCCGCGCCGGCGGTTCTGGATCCCCGGGTCAAGCCTGGGGATGAGGGCTTACTGGAAATCTAGATGCGCGTCGACCTGTTTGATTTCGAGCTGCCGCCGGAGCGGATCGCGCTCAGGCCGGTCTCGCCGCGCGATGCCGCGCGCCTGCTGGTGGTGCGGCCCGGTGCCCAGCCGGAACTCACCGACGCCCAGGTCCACGACCTTCCCGACCTCCTGAACCCCGGCGACGCTCTCGTCGTCAACGACACCCGCGTAGTGCCGGCGCGGCTGAACGGCGTGCGCCGCCGCGAGATCGGCGAGGGGGTGAGGGTCGAGGCGATGCTGCACAAGCGCATCTCCGCCGATACCTGGCTGGCATTGGCCCGGCCGGCCAAGCGACTGGCAATCGGCGACCGCATCCGCTTCGGCGGGGAAGGGGACGCCTGCCTGCTCGGCACCCTCGACGCCACCGTGGACGAAAAGGGCGAAGGCGGCGAGATTCGCCTGCGTTTCGATTTTACCGGCGCCGCGCTCGATGAGGCGGTCGCCACGGTCGGGCACATCCCGCTGCCGCCTTATATCGCGGCCAGGCGACCGGACGATGCGCAGGATCGCGCCGATTACCAGACCATGTTCGCCCATGAGGAAGGCTCGGTCGCGGCGCCGACCGCCGGCCTGCATTTCACGCCCGAGCTGGTGACGCGGCTGGAGGCGCGCGGCATCGCCACCCACCGTGTGACGCTGCACGTCGGTGCCGGCACTTTCCTGCCGGTGAAGTCCGACGACACCTCTGGCCACCGCATGCACGCCGAATGGGGCGAGGTCTCCGCCGAGGCCGCCACCGCGCTGAACACGGTGAAGGCGGCCGGCGGGCGCATCGTCACCGTCGGTACCACGGCGACGCGGCTGCTGGAGAGCGCGGCATCCGATGATGGGCAGCTCACGGCGTGGCGCGGCGAGACCGACATCTTCATCACGCCCGGCTACCGCTTCCGCTTCATTGGCGGCATGCTGACCAACTTCCATCTGCCGCGCTCGACCCTGGTGATGCTGGTCGCCGCCTTCATCGGCCATGATGTGCAGAAGCTCGCCTATGCCCATGCCATCGCGAGCGATTACCGCTTCTATTCCTATGGCGATGCCTGCCTTCTGCTGCCATAAGCCCCGGCCATGAGCGACATCTTCCATTTCAGCCTGAAGGCAACCGACGGCGCTGCTCGCCTCGGCGAGATCTCGACGCCGCGCGGCACCATCCGCACCCCCGCCTTCATGCCGGTCGGCACCGCCGGCACGGTGAAGGGCATGTATCCCGAGCAGGTGCGTGCGCTTGGCGCCGACATCATCCTCGGCAACACCTATCACCTGATGCTGCGTCCGGGCGCCGAGCGGGTGGTGGCGCTCGGCGGGCTCCATGAATTCGCGCGCTGGCCGCACCCGATCCTCACCGATTCCGGCGGCTTCCAGGTGATGTCGCTGGCGGCGCTGCGCAAGCTTACTGAGCAGGGCGTGACCTTCCGCTCGCACATTGACGGTGCCTATTACGAGCTGACGCCGGAGCGCTCGGTCGAGATCCAGGGCCTGCTGGGCGCGGACATCCAGATGCAGCTCGACGAATGCGTGCGGCTGCCGGCGACGCCGGAGGAGATTGCCCGCGCGCTCAGGCTCTCATTGCGCTGGGCGGAGCGCTCCAGGCGAGCCTTCGAGGCGCAGCCGGCGGGAAGGGCGCTGTTCGGCATCGTGCAGGGCGGCGATGATCCCGAACTGCGCGTGGAGTCGGCGCGTGGCCTCGTCGACATCGGCTTCCAGGGCTACTCGATCGGCGGCCTCGCCGTCGGCGAGCCGCAGGAGGTGATGCTGCGCATGATCGAGACGGTAGCGCCGATCCTGCCCACCGAGCGCCCGCGCTATCTGATGGGTGTGGGCACGCCGGACGACATCGTTGAATCGGTGGCGCGCGGCGTCGACATGTTCGATTGCGTGATGCCGACCCGCGCCGGGCGGCATGCGCTCGCCTTCACCCGCTTCGGCCGCATCAACCTGAAGAATGCGCGCCACGCCGACGATCCGCGCCCGCTGGATGAGGCCAGCGATTGCCCGGCGGCGCGCGACTATAGCCGCGCCTATCTGCACCATCTTGTCCGCTGCGACGAGATGCTGGGCTCTATGCTGCTGACCTGGGTGAACCTTGCCTATTACCAGAGCCTGATGGCCGGCATCCGCGCCGCGATCGACGAAGGCCGGTTCGAGAGCTTCAAGGCAGAGGTGCAGGAAGGCTGGGCGCGCGGGGACATCCCCGCGCGGTAGTCTAGTTCCATCAGGACCACGTCATCCTGAGCTGCGAGCGAAGCGAGCCTCGAAGGATGCTCGCTCCAAACTGCCTCAACCCTTCAGCTTCGTCGCGATGGTCGCGACGTGGCGGCCCTGGTAGCGGGCGCCTTCAAGCTCCACGGCCGAGGGGAAGCGGGCGCCGTCGCCGCCGGTGATGGTGGAGGCGCCATAGGGCGAGCCGCCCTTGATCTCGTCGAGGCCCATCTGCCCCTGGAAAGCGTAGGGCAGGCCGACAACGATCATGCCCTGGTGCAGCAGGGTCGGGATGAATGTCAGGATGGTCGATTCCTGGCCGCCATGCTGGGTGGCGGACGAGGTGAACACCGAGCCGACCTTGCCGACCAGCGCGCCGCTCATCCACAGGCCGCCGGTCTGGTCCATGAAGCTGCGCAGCTGCGAGGTCACATTGCCGAAGCGGGTGCCAGAGCCGAAAATGATGGCGTCATAGTCCTTGAGGTCATCGACAGTGGCGACCGGAGCCGCCTGGTCGAGCTTGAAGCCGGATTTCTCGGCGACCTCGCGCGACACGATCTCCGGCACACGCTTCACATCGACTTGCGCACCGGCCTCGCGCGCGCCTTCAGCGACCGCGTTCGCCATCGCCTCGATATGCCCATAGGCCGAATAATAGAGAACGAGAACCTTCGCCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP048834|611248:621564|620964_621564_-|WP_170009724.1|DBSCAN-SWA
MAKVLVLYYSAYGHIEAMANAVAEGAREAGAQVDVKRVPEIVSREVAEKSGFKLDQAAPVATVDDLKDYDAIIFGSGTRFGNVTSQLRSFMDQTGGLWMSGALVGKVGSVFTSSATQHGGQESTILTFIPTLLHQGMIVVGLPYAFQGQMGLDEIKGGSPYGASTITGGDGARFPSAVELEGARYQGRHVATIATKLKG
>NZ_CP048834|611248:621564|614115_614958_+|WP_170009708.1|DBSCAN-SWA
MPTVLNTTVPKVPLWGHAGARLPLLDDEAAAIKLAVSHLTFRYGQFTALKGVSVPIAANKVTAFIGPSGCGKSTLLRALNRMHDLYPDQQVEGEVWMGGENILDPSVDVLTLRRRIGMVMQRPTPFPMSIYDNVAFGMRLNEELDHSELDERVEMALRRAVLWDEVRNILRRSALSLSGGQQQRLCIARTIAVRPEVILLDEPCSALDPISTARVEETVEELKSDSTVVIVTHNMQQAARISDYTAFLYLGELVEFGPTGRIFANPRDARTDRYVTGRMG
>NZ_CP048834|611248:621564|618669_619746_+|WP_170009720.1|tRNA|DBSCAN-SWA
MRVDLFDFELPPERIALRPVSPRDAARLLVVRPGAQPELTDAQVHDLPDLLNPGDALVVNDTRVVPARLNGVRRREIGEGVRVEAMLHKRISADTWLALARPAKRLAIGDRIRFGGEGDACLLGTLDATVDEKGEGGEIRLRFDFTGAALDEAVATVGHIPLPPYIAARRPDDAQDRADYQTMFAHEEGSVAAPTAGLHFTPELVTRLEARGIATHRVTLHVGAGTFLPVKSDDTSGHRMHAEWGEVSAEAATALNTVKAAGGRIVTVGTTATRLLESAASDDGQLTAWRGETDIFITPGYRFRFIGGMLTNFHLPRSTLVMLVAAFIGHDVQKLAYAHAIASDYRFYSYGDACLLLP
>NZ_CP048834|611248:621564|611248_614020_+|WP_170009706.1|DBSCAN-SWA
MSESDASNPGEGGPSDIRPVSITDELSRSYLDYAMSVIVSRALPDVRDGLKPVHRRILFSMRENNYTPDRAYNKSARVTGDTMGKYHPHGNQAIYDALVRLAQEFSMRLPLIDGQGNFGSVDGDPPAAERYTEVRLARPAMALLDDLDKDTVDFQDNYDGREQEPTVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVVDACIALIDEPDMEIERLLDLIPGPDFPTGALILGRSGIRQAYLTGRGSVVMRARATIETTRREREAIIITEIPYQVNKATMIERMAELVREKRLEGIAEIRDESSREGMRVVIEIKRDAQADVVLNNLYRMTALQTSFGANMVALNGGKPALMTLHDLLTAFVAFREEVISRRTKFLLRKARDRAHVLVGLAIAVANIDEVIRTIRTSPDPATARDLLMARHWPAHDVAPLIVLIDDPRHRIAEDGTYRLSAEQARAILDLRLQRLTALGRDEIADELDKIAVEIREYLEILASRARIRSIVKDELLAVKTDFNTPRRTEIVEAEGDFEDEDLIAREDMVVTVSHAGYVKRVPLSTYRAQRRGGKGRAAMQTRDEDFVTRLFVASTHAPVLFFSSKGQVYKLKVWRLPIAAPQARGKALVNILPLDADERITSIMALPDEEVWSGLQIMFATTGGTVRRNELSDFTNVNRNGKIAMKLEEGEAIADVQLCSTADDVLLTTAHGQCIRFPTTEVRVFKGRDSMGVRGIALEGDDRVIAMSIIRHVEANSEERAGYIKMANAVRRSQSGAENGVEEVIETDTEEEGGAEGGGLSASIDQARYVEMGAAEQFILTLSENGYGKRSSSFEYRITRRGGKGIVAMAVNDRNGPLVASFPVEESDQIMLVTDGGQLIRCPVNGIRIVGRGSQGVIVFDTADDEKVVSVERVTEEEDSEAGEAADEAAPE
>NZ_CP048834|611248:621564|616273_616750_+|WP_170009712.1|DBSCAN-SWA
MRLLLCLVLLAGMFATSAGATDAVGFRRLRINDPVRPLGAVIALDLGLARGFDPDSLAHFTVPVLVIAAGNSGENIPAAMESGYLAAHLPKSTTRFVTASRAAHFSFLPLCKPGAVALLETDKPGDGMVCRDGEEGRRAGVHQETIAEVIRFLAAPPN
>NZ_CP048834|611248:621564|618007_618463_+|WP_170009718.1|DBSCAN-SWA
MSDAENTLVLETTQGPVKIKMRPDLAPGHVARITTLVNDGFYDGVVFHRVIEGFMAQTGDPTGTGRGGSGVKLKAEFNKGRHQRGTVSMARAQDPNSGDSQFFICFGDASFLDGQYTVWGEVIEGMENVDKIKRGEPVQNPDKIVSAKMAA
>NZ_CP048834|611248:621564|616840_617347_+|WP_170009714.1|DBSCAN-SWA
MSARIAFYPGSFDPPTNGHVEVARAAARLADRLVVGVGVHPGKAPIFNAPERLDMLREVFTPVAAEAGAALDCVTFDDLVVDAARREGARLLIRGLRDGTDLDYEMQMAGMNAVLAPDVQTVFLPASPIARPITATLVRQIAAMGGDVSAFVPPAVLVRLRERFGRGT
>NZ_CP048834|611248:621564|617428_617971_+|WP_170009716.1|DBSCAN-SWA
MFRRLMTAATLLLALALPAAAQTKKPDPQNTIIMQTTKGPVVIALRPDIAPKHAERIKQLTREGFYDNVPFHRVIEGFMAQTGDGEFGNGTGGSKHPDLPAEFSKVPFKRGTLGMARASSPDSANSQFFICFGDASFLNGQYTVIGEVISGMENVDKIKRGEPVVNPDKIVSMKVQADVK
>NZ_CP048834|611248:621564|619755_620889_+|WP_170009722.1|tRNA|DBSCAN-SWA
MSDIFHFSLKATDGAARLGEISTPRGTIRTPAFMPVGTAGTVKGMYPEQVRALGADIILGNTYHLMLRPGAERVVALGGLHEFARWPHPILTDSGGFQVMSLAALRKLTEQGVTFRSHIDGAYYELTPERSVEIQGLLGADIQMQLDECVRLPATPEEIARALRLSLRWAERSRRAFEAQPAGRALFGIVQGGDDPELRVESARGLVDIGFQGYSIGGLAVGEPQEVMLRMIETVAPILPTERPRYLMGVGTPDDIVESVARGVDMFDCVMPTRAGRHALAFTRFGRINLKNARHADDPRPLDEASDCPAARDYSRAYLHHLVRCDEMLGSMLLTWVNLAYYQSLMAGIRAAIDEGRFESFKAEVQEGWARGDIPAR
>NZ_CP048834|611248:621564|615078_616125_-|WP_170009710.1|DBSCAN-SWA
MADRLIDLRSDTLTRPTDAMRQAMANAPVGDDQYGEDVSVNALEARIAELLGKEAAVFVPSGTMANQIAVKVLTRPGEEVITGGEAHLLWHEAGGASANAGVQIIALGTSGIFTADELRGAFKPRGHMVFPATTLVVIENTHNRGGGVVFPQTLVEDVCVTAGELGMTTYLDGARLFNAAVATGKTPRELAAPFRMASIALSKGLGCPVGSVIAGNSEDMVAARRQRRLFGGAMRQAGILAGAGLYALDHHMERLAEDHANARLIGEHISGARNADFDLATVQSNIVVFRTRPEAPPDAEVIARARQQGVLLLAFGPRMLRMVTHLDVSRADCEKAGAVVAGILDGRA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_170009706.1|611248_614020_+	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	4.0e-97	31.9
WP_170009708.1|614115_614958_+	phosphate ABC transporter ATP-binding protein PstB	W8CYL7	Bacillus_phage	4.8e-14	29.7
WP_170009710.1|615078_616125_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_170009712.1|616273_616750_+	hypothetical protein	NA	NA	NA	NA
WP_170009714.1|616840_617347_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	2.3e-19	30.4
WP_170009716.1|617428_617971_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	1.1e-40	57.5
WP_170009718.1|618007_618463_+	peptidylprolyl isomerase	A0A1B1IVS0	uncultured_Mediterranean_phage	5.1e-34	52.5
WP_170009720.1|618669_619746_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_170009722.1|619755_620889_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.2e-95	50.6
WP_170009724.1|620964_621564_-	NAD(P)H:quinone oxidoreductase	M1IAZ8	Acanthocystis_turfacea_Chlorella_virus	3.8e-13	32.0