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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP053083 Escherichia coli strain HB37 plasmid pHB37-3, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP053082 Escherichia coli strain HB37 plasmid pHB37-2, complete sequence 0 crisprs RT 0 0 0 0
NZ_CP053080 Escherichia coli strain HB37 chromosome HB37, complete sequence 5 crisprs RT,cas3,PD-DExK,csa3,DEDDh,DinG,WYL 0 3 8 0
NZ_CP053081 Escherichia coli strain HB37 plasmid pHB37-1, complete sequence 0 crisprs DEDDh,RT 0 0 0 0

Results visualization

1. NZ_CP053080
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053080_1 1911494-1911607 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053080_2 3255724-3255815 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053080_3 3936875-3937010 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053080_4 4632394-4632533 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053080_5 5062201-5062327 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP053080_2 2.1|3255750|40|NZ_CP053080|CRISPRCasFinder 3255750-3255789 40 NZ_CP041417 Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence 47951-47990 1 0.975
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 271-327 5 0.912
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_AP023208 Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence 12113-12164 11 0.788
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 MT230402 Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence 272-323 11 0.788
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_AP023207 Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence 31252-31303 11 0.788
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP010208 Escherichia coli strain M11 plasmid B, complete sequence 30155-30211 12 0.789
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 208982-209033 13 0.75
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 219476-219527 13 0.75
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 210310-210361 13 0.75
NZ_CP053080_4 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder 4632438-4632489 52 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 191265-191316 13 0.75
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 43-99 13 0.772
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 42-98 13 0.772
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP044307 Escherichia coli strain C27A plasmid pC27A-2, complete sequence 18328-18384 13 0.772
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 42-98 13 0.772
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 42-98 13 0.772
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_AP023206 Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence 87115-87171 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229227-229283 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229328-229384 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 229429-229485 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 4114-4170 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239721-239777 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239822-239878 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 239923-239979 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 4113-4169 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230633-230689 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230734-230790 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 230835-230891 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 4113-4169 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211603-211659 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211704-211760 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 211805-211861 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 4113-4169 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 NZ_CP044147 Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2 7392-7448 14 0.754
NZ_CP053080_5 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder 5062236-5062292 57 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 84216-84272 14 0.754

1. spacer 2.1|3255750|40|NZ_CP053080|CRISPRCasFinder matches to NZ_CP041417 (Escherichia coli strain STEC711 plasmid pSTEC711_1, complete sequence) position: , mismatch: 1, identity: 0.975

gcgctgcgggtcatttttgaaattacccccgctgtgctgt	CRISPR spacer
gcgctgcgggtcattcttgaaattacccccgctgtgctgt	Protospacer
***************.************************

2. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 5, identity: 0.912

aggtcggcaatag-ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
-agtcggtaacggtttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	Protospacer
 .*****.**..* ********************************************

3. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 11, identity: 0.788

gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
acgggcgactcgtaggcctgataagacgcgccagcgtcgcatcaggcaccga	Protospacer
.*.   .***************.******* *****************  * 

4. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to MT230402 (Escherichia coli strain DH5alpha plasmid pESBL87, complete sequence) position: , mismatch: 11, identity: 0.788

-gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
ggtaacg-gtttgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
 *.* .* ..*.***********.*************************  * 

5. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 11, identity: 0.788

--gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
tggcaacgg--ctgtaggcctgataagacgcgacagcgtcgcatcaggcattga	Protospacer
  *** .*.  ..***********.*************************  * 

6. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 12, identity: 0.789

aggtcggcaatag-ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
-gttcgggtgcagattgtaggcatgataagacgcgtcagcgtcgcatcaggcatcaga	Protospacer
 * ****  ..** ******** ************ ******************... 

7. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************    

8. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************    

9. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************    

10. spacer 4.1|4632438|52|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.75

----gcactgaactcgtaggcctgatgagacgcgacagcgtcgcatcaggcaaggc	CRISPR spacer
aaaaacagtgg----gtaggcctgataagacgcgtcagcgtcgcatcaggcatctg	Protospacer
    .** **.    ***********.******* *****************    

11. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 13, identity: 0.772

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcgcgtacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   ***   *.**  ******** ************ ******************....

12. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 13, identity: 0.772

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcgcgtacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   ***   *.**  ******** ************ ******************....

13. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP044307 (Escherichia coli strain C27A plasmid pC27A-2, complete sequence) position: , mismatch: 13, identity: 0.772

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcgcgtacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   ***   *.**  ******** ************ ******************....

14. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 13, identity: 0.772

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcgcgtacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   ***   *.**  ******** ************ ******************....

15. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 13, identity: 0.772

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcgcgtacagatttgtaggcatgataagacgcgtcagcgtcgcatcaggcatcagc	Protospacer
   ***   *.**  ******** ************ ******************....

16. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
aaagcgattgattttgtaggcctgataagacgcggcagcgtcgcatcaggcatcgtg	Protospacer
*.. **.. .   *********************.******************.*  

17. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

18. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtggcgcgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
. * **  *. * ********************* .*****************. ..

19. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

20. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcaggcacaagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
   **.*  *.*.  ******** ************ ******************. ..

21. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

22. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtggcgcgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
. * **  *. * ********************* .*****************. ..

23. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

24. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcaggcacaagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
   **.*  *.*.  ******** ************ ******************. ..

25. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

26. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtggcgcgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
. * **  *. * ********************* .*****************. ..

27. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

28. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcaggcacaagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
   **.*  *.*.  ******** ************ ******************. ..

29. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

30. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
gtggcgcgagaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
. * **  *. * ********************* .*****************. ..

31. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatagttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
atggcgcgggaatttgtaggcctgataagacgcgttagcgtcgcatcaggcatctgc	Protospacer
* * **  .. * ********************* .*****************. ..

32. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--ttcaggcacaagtttgtaggcatgataagacgcgccagcgtcgcatcaggcatctgc	Protospacer
   **.*  *.*.  ******** ************ ******************. ..

33. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--gttgagtgcagttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
  **.*.  ..**  ******** ************ ******************. . 

34. spacer 5.1|5062236|57|NZ_CP053080|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 14, identity: 0.754

aggtcggcaatag--ttgtaggcctgataagacgcgacagcgtcgcatcaggcattgat	CRISPR spacer
--gttgagtgcagttttgtaggcatgataagacgcgccagcgtcgcatcaggcatccgg	Protospacer
  **.*.  ..**  ******** ************ ******************. . 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 76770 : 159719 53 Stx2-converting_phage(35.71%) integrase,transposase attL 92938:92955|attR 165866:165883
DBSCAN-SWA_2 190759 : 211486 26 Morganella_phage(26.67%) integrase attL 193937:193952|attR 204953:204968
DBSCAN-SWA_3 1620732 : 1654323 39 Escherichia_phage(45.95%) tail,terminase,integrase attL 1613785:1613802|attR 1644490:1644507
DBSCAN-SWA_4 1661489 : 1665243 8 Escherichia_phage(87.5%) holin NA
DBSCAN-SWA_5 3089907 : 3135008 58 Enterobacteria_phage(56.0%) head,capsid,portal,terminase,lysis,integrase,tail,tRNA attL 3082716:3082731|attR 3142359:3142374
DBSCAN-SWA_6 3498466 : 3535947 56 Enterobacteria_phage(50.0%) head,holin,portal,terminase,lysis,integrase attL 3494988:3495002|attR 3536021:3536035
DBSCAN-SWA_7 4038732 : 4093790 48 Escherichia_phage(15.38%) protease,plate,transposase NA
DBSCAN-SWA_8 4354593 : 4430734 83 Enterobacteria_phage(43.4%) holin,portal,terminase,protease,lysis,integrase,tail,tRNA attL 4385842:4385861|attR 4430965:4430984
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP053083
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 9855 : 11867 6 Escherichia_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage