CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP046427	Bacteroides dorei strain JR04 chromosome, complete genome	2 crisprs	csa3,PD-DExK,DinG,PrimPol,RT,DEDDh,cas3,WYL,cas2,cas1,cas4,cas7,cas8c,cas5	6	5	5	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP046427_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046427_1

3662831-3662922

Orphan

Consensus_repeat	Method
AAATGAATAACCAAATGAATAAGCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP046427_1

>merge|NZ_CP046427|1|3662831-3662922|CRISPRCasFinder
AAATAGGCACAAAAATGAATAACCAAATGAATAAGCAATCAAAACATTTCGTTTTTGTAATAGCTTAAATGAATAACCAAATGAATAAGCAA

>NZ_CP046427|1|1|3662831-3662922|CRISPRCasFinder
AAATAGGCACAAAAATGAATAACCAA	ATGAATAAGCAATCAAAACATTTCGTTTTTGTAATAGCTT
AAATGAATAACCAAATGAATAAGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046427.1\|WP_005932418.1\|3661376_3661598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005851541.1\|3666320_3667043_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP046427.1\|WP_004327299.1\|3659321_3661361_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366234
NZ_CP046427.1\|WP_007832427.1\|3673686_3673980_-\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|224583
NZ_CP046427.1\|WP_004327294.1\|3663053_3663266_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005932412.1\|3658021_3658420_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_038607317.1\|3669700_3671173_-\|flippase	unknown	unknown	gnl\|CDD\|240533
NZ_CP046427.1\|WP_004325648.1\|3657341_3658019_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223543
NZ_CP046427.1\|WP_004327297.1\|3661587_3661788_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_004327295.1\|3662234_3662654_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP046427.1\|WP_004326989.1\|3658416_3659286_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379165
NZ_CP046427.1\|WP_004326987.1\|3657108_3657345_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005851526.1\|3671523_3671745_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005851529.1\|3671258_3671468_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_038608099.1\|3671861_3672959_-\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|223328
NZ_CP046427.1\|WP_004327296.1\|3661907_3662099_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005851535.1\|3668530_3669574_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_004326986.1\|3656199_3657105_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_005851538.1\|3667030_3668308_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP046427.1\|WP_170267689.1\|3663620_3665318_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|133014

Protein	Function_ID	Function_description	E-value
NZ_CP046427.1\|WP_004326989.1\|3658416_3659286_-\|ATP-binding-protein	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	4.14451e-17
NZ_CP046427.1\|WP_005851541.1\|3666320_3667043_-\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.23979e-61
NZ_CP046427.1\|WP_004327299.1\|3659321_3661361_-\|hypothetical-protein	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	0.000799149
NZ_CP046427.1\|WP_038608099.1\|3671861_3672959_-\|transcriptional-regulator	gnl\|CDD\|223328	COG0250, NusG, Transcription antiterminator [Transcription].	4.287e-05
NZ_CP046427.1\|WP_007832427.1\|3673686_3673980_-\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|224583	COG1669, COG1669, Predicted nucleotidyltransferases [General function prediction only].	2.7447e-18
NZ_CP046427.1\|WP_170267689.1\|3663620_3665318_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|133014	cd02523, PC_cytidylyltransferase, Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline. This family contains proteins similar to prokaryotic phosphocholine (P-cho) cytidylyltransferases. Phosphocholine (PC) cytidylyltransferases catalyze the transfer of a cytidine monophosphate from CTP to phosphocholine to form CDP-choline. PC is the most abundant phospholipid in eukaryotic membranes and it is also important in prokaryotic membranes. For pathogenic prokaryotes, the cell surface PC facilitates the interaction with host surface and induces attachment and invasion. In addition cell wall PC serves as scaffold for a group of choline-binding proteins that are secreted from the cells. Phosphocholine (PC) cytidylyltransferase is a key enzyme in the prokaryotic choline metabolism pathway. It has been hypothesized to consist of a choline transport system, a choline kinase, CTP:phosphocholine cytidylyltransferase, and a choline phosphotransferase that transfers P-Cho from CDP-Cho to either lipoteichoic acid or lipopolysaccharide.	1.13206e-65
NZ_CP046427.1\|WP_038607317.1\|3669700_3671173_-\|flippase	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	6.27518e-56
NZ_CP046427.1\|WP_004325648.1\|3657341_3658019_-\|hypothetical-protein	gnl\|CDD\|223543	COG0467, RAD55, RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms].	0.000951718
NZ_CP046427.1\|WP_004327295.1\|3662234_3662654_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.40092e-10

>NZ_CP046427.1|WP_004327295.1|3662234_3662654_+|helix-turn-helix-transcriptional-regulator
MSVFSKNLRYLRESRGLKLDEFEFLGIKKGTMSNYELGNTEPKLSLLCEISKFFRISIDDFLLKDIEAEKITPVVTETAPPETANNNFRELLDVLREKDSTIREMAEEIGMLKQTITQLKQDKSGRVSDASDSTVANAI
>NZ_CP046427.1|WP_004327296.1|3661907_3662099_-|hypothetical-protein
MEVKFKKGQSVRITKRNGEIIDGIVRDWDYNICTFVREYNIDYMKNGQVWTVICVPEDAIKEL
>NZ_CP046427.1|WP_004327297.1|3661587_3661788_-|hypothetical-protein
MKERIVVEYGEVNKIAELMGCTNVMVSHALAFRKNSKLARSIRKLAIERGGSKVGGNPQNTSSHEK
>NZ_CP046427.1|WP_005932418.1|3661376_3661598_-|hypothetical-protein
MKNDLMTLFSDQLHWFARLKRKQRFCVLYFCMSFGILLSIFFINPLLELLVVLNFGISVRLLKKHVPLNDLED
>NZ_CP046427.1|WP_004327299.1|3659321_3661361_-|hypothetical-protein
MEYFDNILCVTYKELLDIMPKGTLNSQLSREKLDVVSRGGGENNPALYAYSSLPEKYKKRWVERHGEPEKQMRQEMIRNIVKKDEKAENFFEDYRYDKNGEMVALPEDVKKEYTWNASVLNALMEEFKRLSSSNNKLTGFRRNLWELLLVTSEEWRPVYGHSLPGSVGRLKALINKFRPDNYGVLVSGKYGNSNTLKIEEDGGRYLVALKRSRVPVYTDMEIFEEYNRVAPERGWKPLKSPRSLREWFNSPRVEPLWYDAVYGEMKAHQRYDRKHRTILPGRRDSLWYGDGTKLNLYYRDENGNKCTTSVYEVVDAYSEVLLGYYISDNEDYIAQYHAFRMAIQTSRHKPYEIVCDNQGGHKKNAALGLFSKISRIHRPTAPYNGESKTIENIFYRFQSQVLKKRFGFTGQNITAKRDTSRPNLEFINANIDSLPTLEELKEQYAAAREQWNSMKHPATGISRIEMYNTSVNEATDAVSVSDMVEMFWYTTEKPSLFTANGIEITVQGKKYPYEVFSAPGEPDLEWRRRNTYKKFYVQYDPYDMSSVRLLYKDKGGAMRFECVASFPLMIHRAQQEQTEAEKRFIRAQQEAVINERINRQVVAKDIEYEHGVAPEQNGLRTPDLKGLGKEAQRQIDRRTRKYSQPARPSIGRDMKVISNVTWDSFEKKEVSIRKVVGKL
>NZ_CP046427.1|WP_004326989.1|3658416_3659286_-|ATP-binding-protein
MEITMKEKDAISESLRAYVAKYPSQTKAAGSLKGVSVGTVSNILNGRYENISDEMFRNVASQVGGVSATGWQIVETGAYQEITAVLSDAQRWRNVTWVTGEAGCGKSTTARVYLQEHKEVFYILCSEDMKKGDFVREIARTVGIRTEGYNIREVWGLILDDIIQMDAPLLVFDEADKLTEPVFHYFISLYNKLEEKCGVVFLSTDYIAKRISNGLRYQKPGYKEFYSRIGRKFYELEPTDVNDVFAICSANGVTDRKDIDKVIKEASTCDFDLRRVRKSIHKVKRMTGE
>NZ_CP046427.1|WP_005932412.1|3658021_3658420_-|hypothetical-protein
MTPVQIPFKRNFKDMENKFEYLKIDGREQLPAPWSDYPVLREYETVTVYRNGRDYLDALVGQQDGWWVAGVHMEVGGSGGGFNPGRKWGQFATRENALLWALGRMLCHEKLRGAARQAVLDRIDNIRQLTLF
>NZ_CP046427.1|WP_004325648.1|3657341_3658019_-|hypothetical-protein
MEEEKKDNKKAGMRRALNVRDILNKKYDVFPFEGKWKDAFDTPEVRGCWFVWGNSGNGKTSFVMQLCKELCKYDRVAFNSLEEGTSLTVQNNLRRFGMAEVSRHLAFIKEDIPTLKIRLRRHKSFNIVIIDSFQYTQMTYRDYIQLKEEFPDKLFVFISHARGKNPKGDAATSVMYDADLKIWVEGYVAFSKGRYQGATGEYTIWEKGAYDYWNVAGPKQKGGQA
>NZ_CP046427.1|WP_004326987.1|3657108_3657345_-|hypothetical-protein
MSRIKKQLEICPPAYMCKGPNRENFVSTGHKCGYCKGNGWFWGTEEGSREDVHVSCPVCGGSGELDAIITVDWKPSSK
>NZ_CP046427.1|WP_004326986.1|3656199_3657105_-|hypothetical-protein
MRKEYYNYVVKLPVLLHELFRGKVADYHFSDMTVVMNHLVKSYIRMTDGGRVSTATRRILLCMDRIPDMSFFFRRQEKSVLFFEMDPAVAGSLQRAIIAGGWGNRQRLVVRLVCAFCCGAGVTLNNLSMELASEEVFRRPEGYLIHTYVSNYQYVFLKETAAAQRMSVEGMLTAAAELLVGTDDEGSGYHIPESLGRIADRVFEVRGSTLKDFRRQCLVSIRTNTIGPDRIASFMEKHGIASAREFLRRVVLFFLEARYLIYRKEVELDEDDLPEEEETDWEETMYSQYQKRDFAISTYNY
>NZ_CP046427.1|WP_004327294.1|3663053_3663266_-|hypothetical-protein
MSKVIHVHLIFEKKNIYFGSISAIFETLTEKQVGITKSSLLHAGLVDDIAKYTKRAMIIQSRLITCTRKG
>NZ_CP046427.1|WP_170267689.1|3663620_3665318_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MQAIILAAGMGKRLGELTKNNTKCMVEVNGIRLIDRMITQLSKFNLNRLVIVVGYEGKKLIDYIGHRYDDILKIEYINNPIYDRTNNIYSLALAKEELCKDDTILLESDLIFEDRMLELLINHRDPDLALVAKYETWMDGTMVCVDNDRNITNFVPKEAFCYENADVYYKTVNIYKFSSEFSKYQYVPFLEAYCRVMGNNEYYEQVLRILLHLHSSTLKALPITNEKWYEIDDVQDLDIASTIFSDKDIKWKEYHKRYGGYWRFPQMLDYCYLVNPFFPPKRMKDELRANFDTLLENYPSGMQINSLLAGKYFGVKQDYIVVGNGAAELIKVVMEEHSGDKVGIIYPTFDEYPNRLRKEQIVPFFPQNKNFEYTAEDLMAYFEDKNISLMMLINPDNPSGHFMPKNDVLQLAEWCAIKGIRLLVDESFVDFTYGAVDNSLLYDDILTAYPHMMVMKSISKSYGVPGLRLGILATADIDLIVRMKKEVSIWNINSFAEFYLQIYGKYEKDYIKACAKFIAERETFYTELQSIPYLRVIPSQANYFLCEVIAKYKGGETMRVKVRSV
>NZ_CP046427.1|WP_005851541.1|3666320_3667043_-|glycosyltransferase
MCKLSIIIATYNSAKTIADALKSVCAQTYQNWECIVVDGASTDNTVCIVNDFILMNSQIRCVSKKDNGIYDAFNKGWRMAKGEWIHYLGSDDKLTEDGMERLMKYAEDADLVGGGVYLCRENEVPKPQYTNGIGGCHQGFVIKRSVIEELGGFDEQYRIFADKDLLIRLEQARYKVRNYPIIIAYFYIGGISQNIRSLYSLTKERYRSYQCTGYSKYPLISSAYSYIYAILVFLKHKIIG
>NZ_CP046427.1|WP_005851538.1|3667030_3668308_-|hypothetical-protein
MDSTNISYKEKADKRIILVFIIQLIALGGAVDGFMSHSVKMNSWENCILPIALLYYLSFSNIDLKKIKALYFVLSVITISQIAVIYKYGTGNILIGRYYDVIIAFVLLRSLGIDRFFFYFENSVTILVKISLLLWGVCLLFPMLCNILVPLSLPIGFPTCSFTWGFVGLANLDSTEGLVLRNLGFAWEPGRFSSILVVTLMIHLFRNRFNLFRKNFVPLLLGIISSQATTGYMAFSVCLLGLLVNSDKKRSSKLVKYSLCGIFCIVLFCSPFMLEKMKQILDPEYFLNSNNIERLERTGEQYVPQRAEGLLMEFMNVADSPWIGYGDFKGESYISRELFPTIDIALSNGILQIFAMLGIPIGLLLYWALYKSSTLLASHFKVKGGYLFFLVICAVNVSYNFFVEPFFMVIILYCLFERKDRLCVN
>NZ_CP046427.1|WP_005851535.1|3668530_3669574_-|hypothetical-protein
MRRGYKVVCNTAAGRHRYMNLLIPYVLDNDIVDRYDIWVNTLNPVDLRFFELLAQKYSKIKLVYIEDNKFSGLKSLFEFYKYCTEEDTIYVKLDDDLIWFEPDAITRMVDFRIDNPDYFIVSPLVINNCSGTYLLQNGGKIRLKKYLSPTMTWESAWCSATFAYQLLDWFQKKVRDDSYKELHMGKKPIGMLRFSINMIVWFGATFKEFGGVCPKGENDEEYFSVIKPTQLGVANCINADVLVAHFAFTYQREDLDKTDMLLKYENLIRSKKDKVCSLYEEIKCLTLMAKENVNIEIPHYDDCRSKKNGFREFLRTRRIPGTFYDLGRIYCRLKEHKIEFDDILFSK
>NZ_CP046427.1|WP_038607317.1|3669700_3671173_-|flippase
MAKSVKANYLFNLINSASQLLFPLITFPYASRIMMADGIGQVNFFQSIISYISLFTCLGIPMYAIREVAKVRDNPEKMTRITVEILLLHAFLTLLGYMAVAVICLTVTKVQTDIPLFLLLSATIFFTAIGCEWFYQGIEDFKYVAIRGMVVKTISVILLFLLVKSKEDILWYGAYSVLGVLGGNIFNFVRLRKYLHKDMIEFRALHPFSHLKPAIHIFAFNVIVSIYLQLNNVLLGFMKDAEAVGYFTAATKILVITMSLSSSLGAVIMPRTSNLIAENKMDEFKVLIQKSYDFILALAMPLTVGLIFTSPSVILLLSGESFAPAILTSQIVALNILMVGISGVMGLQVLYPMGRINIVILCTFIGAVVNVVLNVLLIPVYGHNGTAVAYMLAEVAVTVSMFIIGRRHIPIQFFKKEHLHYVLGSVCMGICLYWVLLLELDDFMTLITMLIVGLMMYISVILILKDTMGMLFWKIIKSYLDKCQYKKKLG
>NZ_CP046427.1|WP_005851529.1|3671258_3671468_-|hypothetical-protein
MNTLKGLGSDIKLRSIKQVSASLLADDDVPDTLLDWTSEFAGQWEDDRTADEVIEDIRGARTSNREIQQ
>NZ_CP046427.1|WP_005851526.1|3671523_3671745_-|hypothetical-protein
MKSEPFNPVQLHLLKMFSYAKDERALEEIRKSLTAYFAQRVEEDMDKLWDEGLWDQDKNEAILKEHLRVPYND
>NZ_CP046427.1|WP_038608099.1|3671861_3672959_-|transcriptional-regulator
MKKLSHQFDKPKRSVASPEALEALRNNNAVRWYVLSLPDCHRGGVRGLQREQDRRIQAGEPSFGFFAPSYQEVRRIDGKFVNTQRPLLFNYVFVRASERDVFQLMQRFPVLSFLPRVRERKREYFPYLSDAAMENLQWVARSYSNTLPVYIPQPDGLRKGDRIRITEGRFKGVEATVVIQPGAGRKDVMVCVENWMWVPLLRVMPGEYEVIALNDEDKHVYTRLDNDCMLNGLHSALQRYHSAEGVSEEDRSLAARALKEYGNLQMDTDVMRCKLYAILLPAYTILGMEEEAAKLVGVMQTMLPLVKAEQSRALAVVTLYGCTDSSIYYHLAHEAVDPWKKEEKPKKSKQQLINRLDDYDRWLRH
>NZ_CP046427.1|WP_007832427.1|3673686_3673980_-|nucleotidyltransferase-domain-containing-protein
MLCLNECKAKLVSFKQCFGHEFGIKSIGIFGSVARQENREDSDLDIVVDIDNPTLSTMYTLKTVLTEMFHCEIDLVRFRSSLSPFLKQNIEKEAIYV

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Crispr_ID: NZ_CP046427_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP046427_2

4624497-4624797

TypeI

I-C:NA

Consensus_repeat	Method
GTTTCAATCCNNACACACCCACGTAGGGTGTGACTT	CRT
AGTTTCAATCCACACACCCACGTAGGGTGTGAC	CRISPRCasFinder
GTTTCAATCCACACACCCACGTAGGGTGTGACT	PILER-CR

4 spacers

cas2,cas1,cas4,cas7,cas8c,cas5,cas3

The CRISPR arrays of NZ_CP046427_2

>merge|NZ_CP046427|2|4624497-4624797|CRT,CRISPRCasFinder,PILER-CR
TCCAATCCATATATTCCCACGCAGGGTGTGACTTTATGGAAGCAGAAGTAAAACAAGTAATCAAAGTTTCAATCCACACACCCACGTAGGGTGTGACTTTGGAGTCGGGCTTGTCTTTCTCCTTGTCCAAGAGTTTCAATCCACACACCCACGTAGGGTGTGACCTCGTATTAGTTGACAATGTAGAGATGGACATAAATAGTTTCAATCCACACACCCACGTAGGGTGTGACTTAACAGCTATCTATTTAAAAAACAAGTTTCTTGGTTTCAATCCACACACCCACGTAGGGTGTGACTC

>NZ_CP046427|2|1|4624497-4624797|CRT
TCCAATCCATATATTCCCACGCAGGGTGTGACTT	TATGGAAGCAGAAGTAAAACAAGTAATCAAA
GTTTCAATCCACACACCCACGTAGGGTGTGACTT	TGGAGTCGGGCTTGTCTTTCTCCTTGTCCAAGA
GTTTCAATCCACACACCCACGTAGGGTGTGACCT	CGTATTAGTTGACAATGTAGAGATGGACATAAATA
GTTTCAATCCACACACCCACGTAGGGTGTGACTT	AACAGCTATCTATTTAAAAAACAAGTTTCTTG
GTTTCAATCCACACACCCACGTAGGGTGTGACTC

>NZ_CP046427|2|2|4624561-4624795|CRISPRCasFinder
AGTTTCAATCCACACACCCACGTAGGGTGTGAC	TTTGGAGTCGGGCTTGTCTTTCTCCTTGTCCAAG
AGTTTCAATCCACACACCCACGTAGGGTGTGAC	CTCGTATTAGTTGACAATGTAGAGATGGACATAAAT
AGTTTCAATCCACACACCCACGTAGGGTGTGAC	TTAACAGCTATCTATTTAAAAAACAAGTTTCTT
GGTTTCAATCCACACACCCACGTAGGGTGTGAC

>NZ_CP046427|2|1|4624562-4624796|PILER-CR
GTTTCAATCCACACACCCACGTAGGGTGTGACT	TTGGAGTCGGGCTTGTCTTTCTCCTTGTCCAAGA
GTTTCAATCCACACACCCACGTAGGGTGTGACC	TCGTATTAGTTGACAATGTAGAGATGGACATAAATA
GTTTCAATCCACACACCCACGTAGGGTGTGACT	TAACAGCTATCTATTTAAAAAACAAGTTTCTTG
GTTTCAATCCACACACCCACGTAGGGTGTGACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP046427.1\|WP_008655271.1\|4618673_4620137_+\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274983
NZ_CP046427.1\|WP_038607545.1\|4620336_4621374_+\|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydE	unknown	unknown	gnl\|CDD\|274880
NZ_CP046427.1\|WP_038607548.1\|4629545_4630238_-\|type-I-C-CRISPR-associated-protein-Cas5	cas5	cd09651_cas5_CAS-I-C	gnl\|CDD\|187782
NZ_CP046427.1\|WP_007831003.1\|4614525_4615878_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240548
NZ_CP046427.1\|WP_005842327.1\|4616341_4617979_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP046427.1\|WP_038604768.1\|4621386_4622805_+\|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydG	unknown	unknown	gnl\|CDD\|274879
NZ_CP046427.1\|WP_007855618.1\|4624960_4625251_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP046427.1\|WP_007843550.1\|4626279_4626945_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|273040
NZ_CP046427.1\|WP_007843558.1\|4630239_4631100_-\|Bro-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|214989
NZ_CP046427.1\|WP_008655269.1\|4625260_4626283_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	cas1	cd09721_cas1_CAS-I-C	gnl\|CDD\|188360
NZ_CP046427.1\|WP_038604780.1\|4633668_4635033_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_CP046427.1\|WP_038604774.1\|4627827_4629549_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	cas8c	pfam09709_cas8c_CAS-I-C	gnl\|CDD\|378245
NZ_CP046427.1\|WP_038607542.1\|4613176_4613716_-\|carbonic-anhydrase	unknown	unknown	gnl\|CDD\|239474
NZ_CP046427.1\|WP_007843553.1\|4626954_4627806_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	cas7	cd09689_cas7_CAS-I-C	gnl\|CDD\|377458
NZ_CP046427.1\|WP_005842331.1\|4618020_4618293_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP046427.1\|WP_038604759.1\|4611636_4613052_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP046427.1\|WP_008655266.1\|4635193_4636042_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380625
NZ_CP046427.1\|WP_038604771.1\|4622854_4624045_+\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	unknown	unknown	gnl\|CDD\|274853
NZ_CP046427.1\|WP_038604777.1\|4631110_4633336_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP046427.1\|WP_007831010.1\|4613905_4614490_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736

Protein	Function_ID	Function_description	E-value
NZ_CP046427.1\|WP_008655271.1\|4618673_4620137_+\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274983	TIGR04105, hypothetical_protein, [FeFe] hydrogenase, group B1/B3. See for descriptions of different groups.	0
NZ_CP046427.1\|WP_038607545.1\|4620336_4621374_+\|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydE	gnl\|CDD\|274880	TIGR03956, iron-only_hydrogenase_maturation_rSAM_protein_HydE, [FeFe] hydrogenase H-cluster radical SAM maturase HydE. This model describes the radical SAM protein HydE, one of a pair of radical SAM proteins, along with GTP-binding protein HydF, for maturation of [Fe] hydrogenase in Chlamydomonas reinhardtii and numerous bacteria. [Protein fate, Protein modification and repair].	0
NZ_CP046427.1\|WP_038607548.1\|4629545_4630238_-\|type-I-C-CRISPR-associated-protein-Cas5	gnl\|CDD\|187782	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex; in subtype I-C this protein might be the endoribonuclease that generates crRNAs; also known as DevS family.	6.40743e-83
NZ_CP046427.1\|WP_007831003.1\|4614525_4615878_-\|MATE-family-efflux-transporter	gnl\|CDD\|240548	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. This subfamily includes Streptococcus aureus MepA and Vibrio vulnificus VmrA and functions most likely as a multidrug efflux pump.	1.01859e-111
NZ_CP046427.1\|WP_005842327.1\|4616341_4617979_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP046427.1\|WP_038604768.1\|4621386_4622805_+\|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydG	gnl\|CDD\|274879	TIGR03955, iron-only_hydrogenase_maturation_rSAM_protein_HydG, [FeFe] hydrogenase H-cluster radical SAM maturase HydG. This model describes the radical SAM protein HydG. It is part of an enzyme metallocenter maturation system, working together with GTP-binding protein HydF and another radical SAM enzyme, HydE, in H-cluster maturation in [FeFe] hydrogenases. [Protein fate, Protein modification and repair].	0
NZ_CP046427.1\|WP_007855618.1\|4624960_4625251_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	1.94761e-26
NZ_CP046427.1\|WP_007843550.1\|4626279_4626945_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	2.59196e-24
NZ_CP046427.1\|WP_007843558.1\|4630239_4631100_-\|Bro-N-domain-containing-protein	gnl\|CDD\|214989	smart01040, Bro-N, BRO family, N-terminal domain. This family includes the N-terminus of baculovirus BRO and ALI motif proteins. The function of BRO proteins is unknown. It has been suggested that BRO-A and BRO-C are DNA binding proteins that influence host DNA replication and/or transcription. This Pfam domain does not include the characteristic invariant alanine, leucine, isoleucine motif of the ALI proteins.	7.56054e-18
NZ_CP046427.1\|WP_008655269.1\|4625260_4626283_-\|type-I-C-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|188360	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the DVULG subtype of CRISPR/Cas system.	7.00337e-169
NZ_CP046427.1\|WP_038604780.1\|4633668_4635033_-\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	8.92584e-146
NZ_CP046427.1\|WP_038604774.1\|4627827_4629549_-\|type-I-C-CRISPR-associated-protein-Cas8c/Csd1	gnl\|CDD\|378245	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1). CRISPR loci appear to be mobile elements with a wide host range. This entry represents proteins that tend to be found near CRISPR repeats. The species range, so far, is exclusively bacterial and mesophilic, although CRISPR loci are particularly common among the archaea and thermophilic bacteria. Clusters of short DNA repeats with nonhomologous spacers, which are found at regular intervals in the genomes of phylogenetically distinct prokaryotic species, comprise a family with recognisable features. This family is known as CRISPR (short for Clustered, Regularly Interspaced Short Palindromic Repeats). A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins.	0
NZ_CP046427.1\|WP_038607542.1\|4613176_4613716_-\|carbonic-anhydrase	gnl\|CDD\|239474	cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	1.64668e-59
NZ_CP046427.1\|WP_007843553.1\|4626954_4627806_-\|type-I-C-CRISPR-associated-protein-Cas7/Csd2	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	6.17062e-151
NZ_CP046427.1\|WP_005842331.1\|4618020_4618293_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	1.52028e-44
NZ_CP046427.1\|WP_038604759.1\|4611636_4613052_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.41122e-19
NZ_CP046427.1\|WP_008655266.1\|4635193_4636042_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380625	cd19970, PBP1_ABC_sugar_binding-like, monosaccharide ABC transporter substrate-binding protein. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.	3.08486e-99
NZ_CP046427.1\|WP_038604771.1\|4622854_4624045_+\|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF	gnl\|CDD\|274853	TIGR03918, hydrogenase_maturation_GTPase_HydF, [FeFe] hydrogenase H-cluster maturation GTPase HydF. This model describes the family of the [Fe] hydrogenase maturation protein HypF as characterized in Chlamydomonas reinhardtii and found, in an operon with radical SAM proteins HydE and HydG, in numerous bacteria. It has GTPase activity, can bind an 4Fe-4S cluster, and is essential for hydrogenase activity. [Protein fate, Protein modification and repair].	0
NZ_CP046427.1\|WP_038604777.1\|4631110_4633336_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	6.21741e-50
NZ_CP046427.1\|WP_007831010.1\|4613905_4614490_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.21416e-14

>NZ_CP046427.1|WP_038604771.1|4622854_4624045_+|[FeFe]-hydrogenase-H-cluster-maturation-GTPase-HydF
MSLNNTPSANRLHVALFGRRNSGKSSLINALTGQDTALVSDIPGTTTDTVSKAMEIQGIGPCLFIDTPGFDDEGELGEMRIIRTLKAIERTDIALLLCEDEAHEEEKKWMKQLEEKNIPVILLLNKADIRKDIASTLLRIEKDCGQKPLVISAKERTGIKKIHQAILEKLPADFGQQTITGNLAKEGDLVLLVMPQDIQAPKGRLILPQVQTMRELLDKKCLVVSCTTDQIASTLQALSRPPKLIITDSQVFHTVYEQKPADSLLTSFSVLMAGYKGDIHHYIEGASAIDCLTPQSRVLIAEACTHAPATEDIGRVKLPRMLRKKIGEELQIDIVAGTDFPEDLTPYHLIIHCGACMFNRKYVLNRIDNARKQQIPMTNYGVAIAHLNGILDKIAY
>NZ_CP046427.1|WP_038604768.1|4621386_4622805_+|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydG
MYKADSKIAEEFIDHQEILETLEYARSNKSNRALIEQLIDKAARCKGLSHREAALLLECDQPDLIERIFHLAQEIKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGHKRLALEAGEDPLRNPIEYILESIRTIYSIKHKNGAIRRVNVNIAATTVENYRKLKDAGIGTYILFQETYHKENYEALHPTGPKSKYAYHTEAMDRAMEAGIDDVGLGVLFGLNTYRYDFVGLLMHAEHLEATFGVGPHTISVPRICPADDIATQDFPDAISDEIFCKIVAVIRIAVPYTGMIISTRESAATRRKVLNLGISQISGGSRTSVGGYAIPETPEENSAQFDISDTRTLDEVVNWLLDLGHIPSFCTACYREGRTGDRFMSLVKSGQIANCCAPNALMTLKEYLEDYATADTRAKGIQLIKKELEHIPNPKIKEIATRNLKKIEEGKRDFRF
>NZ_CP046427.1|WP_038607545.1|4620336_4621374_+|[FeFe]-hydrogenase-H-cluster-radical-SAM-maturase-HydE
MKQLIDKLRHKHSLTGEEYAILLTCQDADTLMYLQQQAQEVTLAHFGNAIFIRGLIEVGNRCRNNCYYCGIRKGNPAVARYALKRETILECCREGYALGFRTFVMQGGEDPALTDEWIEATVAAIRNEFSDCAITLSLGEKSREAYERFFRAGANRYLLRHETHNEQHYRKLHPEEMSLKHRLQCLQWLKEIGYQTGTGIMVGSPGQTLPHLVEDLLFIEQFHPQMIGIGPFIPHHETPFGMEPAGSVEMTLKLLSLFRLMHPSALIPSTTALATLSPDGREKGILAGANVVMPNLSPREQREKYALYDNKAAFGAEAAEGLRNLAQRLETIGYRISTDRGDYNH
>NZ_CP046427.1|WP_008655271.1|4618673_4620137_+|4Fe-4S-dicluster-domain-containing-protein
MAFTNNIMIVRHRLLTELVKLWKNGELTTDKIDRLPLELSPRRSKHAGRCCVHKERAVWKYKSLPLLGLDMDDETDELTPLSEYAARAIERANNGKPKDNIMCVIDEACSACVQINYEITDLCRGCTARSCQYNCPKGAVHVHADTGKAWIDHDTCISCGICHKSCPYHAIVYIPVPCEESCPVKAISKDEHGIEHIDENKCIYCGKCMNACPFGAIFEISQTFDVLQRIRKGEQVVAIVAPSILGQFSTTIEQVYGAFRQIGFTDIIEVAQGAMSTVEHEAHELIEKLEEGQKFMTTSCCPSYIELVNKYIPDMKKYVSGTGSPMYYAARIAKEKYPDAKIVFVGPCVAKRKEAQRDEAVDFVMTFEEVSSIFDAFEVNLEIVQPYAMEFSSVREAHGFAQAGGVMGAVKAFLKMEADKINAIQVSDLNKKNIGTLRAYAKSGKAPGQFIEVMACEGGCITGPSTHSGSNGKRQLVQELAKQEKTY
>NZ_CP046427.1|WP_005842331.1|4618020_4618293_-|co-chaperone-GroES
MNIKPLADRVLILPAPAEEKTIGGIIIPDTAKEKPLQGEVVAIGNGTKDEEMVLHVGDQVLYGKYSGTELEHDGKKYLIMRQSDVLAVLG
>NZ_CP046427.1|WP_005842327.1|4616341_4617979_-|chaperonin-GroEL
MAKDIKFNIDARDELKKGVDELANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEVELADAFQNTGAQLVKSVASKTGDDAGDGTTTATVLAQSIVGVGLKNVTAGANPMDLKRGIDKAVAKVVESIKSQAEMVGDNYDKIEQVAAVSANNDPTIGKLIADAMRKVSKDGVITIEEAKGTDTTIGVVEGMQFDRGYLSAYFVTDTEKMECVMEHPYILIYDKKISNLKDFLPILEPAVQSGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKAMLEDIAVLTGGIVISEEKGLKLEQATLEMLGTCDKVTVSKDNTTIVNGAGAKENIQERINQIKAEIKNTTSDYDKEKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVAYIRASEALEGLKGDNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGDFGYNARTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAPGMGGMGGMM
>NZ_CP046427.1|WP_007831003.1|4614525_4615878_-|MATE-family-efflux-transporter
MKDSIDFGSMEIPKLFRKLLIPTVLGMVFSAVFVITDGIFVGQGIGSDALAAVNITAPLFLISTGIGLMFGVGASVVASIHLSQGKLKAARINVTQAVVVSSLFLAVLWGVVCLFAPQVAVWLGSSERLLPLAVEYMYWFLPFLVFSALLSSGMFFVRLDGSPNYAMLCNAIPAVVNILLDYVFIFIFKWGMMGAALATSLGYILGAGMIVVYLSRRKNVIHFCRVKLSKKSMRLTWRNVRYMCHLGASTFLCEAAIACMMFAGNYVFIHYLGEDGVAAFSIACYFFPIIFMVYNAIGQSAQPILSYNFGAGDAMRVRSAFRLALGTAVTCGLVFFALTALFNHQIVAMFIDRSYPAYDIAVAGLPLFASGFIFFAVNIVSIGYFQSVERARPAMMITVLRGFVFMVLCLFGLPLLLKVPGIWLAVPLAEILTFLVIMAIYYRKHQWVRR
>NZ_CP046427.1|WP_007831010.1|4613905_4614490_-|Crp/Fnr-family-transcriptional-regulator
MDAFIQKFCEKYSLPIALSLQLLDNMEKFTFRKGDFLVQEGGRNSNFYIVSKGIWRGHYLNDGVDVSVWFASEGEAIFSSWGYVENTASLVSIEAMCDSELYGISKAKLEVLYAESVELANFGRRLFEQQLLGLESWMITGGSPRAKERYLTLLEENPELLQYVPLKHIASYLWITPQSLSRIRAELGRRKKDQ
>NZ_CP046427.1|WP_038607542.1|4613176_4613716_-|carbonic-anhydrase
MIDDILEFNKKFIESKGYEKYITNKYPDKKIAILSCMDTRLTELLPAALGIKNGDVKIIKNAGGVISHPFGSVIRSLMVAIYELGVKEVMVVAHSDCGACHMNSNEMIEHMKARGIKQETIDMIRFCGVDFGAWLDGFEDTEKSVKGTVRAIMEHPLIPEDIMVRGFIIDSVTGELTKV
>NZ_CP046427.1|WP_038604759.1|4611636_4613052_+|Gfo/Idh/MocA-family-oxidoreductase
MIKNLSTFFVGIALLCLAGCTPIPKETTATKEYTPLEVPVPERPAGQQDVIELITPKLDTVRVGFIGLGMRGPSAVERWTHIPGTKIVALCDLLPENAEKAQKIVTNAGMEAPALYSGSEDAWKQLCERNDIDLVYIATDWKHHAEMGIYAMEHGKHAAIEVPAAMSLDEIWALINTSEKTRKHCMQLENCVYDFFELTTLNMAQKGLFGEVLHVEGSYIHNLEEFWPYYWNNWRLDYNREFRGDIYATHGLGPACQLLNIHRGDRMKTLVAMDTKAVTGPELVKQYQKEEAPDFQNGDHTMTFIRTENGKTIHIQHDVMNPRPYSRMYQLTGTKGFANKYPIEQYCFRPDQIDSTSIPDHENLSMHSAVPEKVKETLMSQYKHPIHQELEETAKKIGGHGGMDFIMDYRLVYCLRNGLPLDMDVYDLAEWCCMADLTRLSIENGNAPVAVPDFTRGNWNKVDGYHHAFAQ
>NZ_CP046427.1|WP_007855618.1|4624960_4625251_-|CRISPR-associated-endonuclease-Cas2
MYILVTYDVDTTSKEGARRLRCVAKACLDYGQRVQNSVFECVVTEAQYSLLKGRVRDIIDMSLDSVRFYILSKNENKRVEVIGVETAYKVEEALII
>NZ_CP046427.1|WP_008655269.1|4625260_4626283_-|type-I-C-CRISPR-associated-endonuclease-Cas1
MRKLLNTLYVTTPEAYLSKDGLNVVISVQQEEVFRIPVINIEGIVTFGYMGASPGVMKLCSDNGISLTFLSPQGRFISRVQGATKGNVLLRKKQYQLSDDASWSLHVVRLMIGGKIQNYRNILRRYIRDYGENEDINRAVQVLERAKRDVLKAQDKTELIGYEGMASNAYFEVLPILILNQKTDFPFHGRNRRPPKDAVNAMLSFAYTLIANDVAAALETVGLDPYVGFLHTLRPGRTSLALDMMEELRAYLGDRFILSLINKRQISVKDFLFQGDNGVVMTDKGKKTFITAWQARKREVIIHPYLNEKVEIGLLPYVQAMLMARYIRQDIDDYPVFLIK
>NZ_CP046427.1|WP_007843550.1|4626279_4626945_-|CRISPR-associated-protein-Cas4
MYNEDDMLMLSGIQHFRFCPRQWALIHIEQQWGDNRLTIEGQILHKHVDDPFYRQKCGDQITLRAVNIASRELGLYGISDAIELFPSSSLENTILHPNYPGRWQPVAVEYKHGKPKRNEVDEVQLAAQIMCIEEMYAIHIPYGAFFYGELRHRVNVDITEELRDIVRQCARDMHDIFSKAVIPKAEYGKHCDKCSLKDICMPEMVNNCTSVDNYLTKNLYL
>NZ_CP046427.1|WP_007843553.1|4626954_4627806_-|type-I-C-CRISPR-associated-protein-Cas7/Csd2
MSELKNRIDFVYIFDVKDGNPNGDPDAGNLPRVDAETGMGLVTDVCLKRKVRNYVQIAKGLVNGFDIFIKEKAVLNTLIDNAHDDSEVKNAKDKIEAARRFMCNNYFDIRTFGAVMSTGKNAGQVRGPIQFTFARSIDPIAVAEHSITRMAVATEKEAEKQDGGNRTMGRKATIPYGLYVCHGFISANLAQQTGFSEEDLELFWNALKNMFDVDRSAARGLMSAQKLIVFKHDSILGNAPANKLFELVKVEKVCDGAPRSFIDYSVTIDKENAPSNVTIEELI
>NZ_CP046427.1|WP_038604774.1|4627827_4629549_-|type-I-C-CRISPR-associated-protein-Cas8c/Csd1
MILKALYDYYHRSGDDVAPFGLEYKEIGFIIVIDRCGNFLRFEDRRIDKKSAQQFLVKKSVSRSSAPVANYLYDNCKYVFGYSDKGDMEKIRKYFEVFKAKVKDIYDAFPDNEDIKAVYAFYQQDHSFIVGAMQKDSLWDDIAKNLNKKYSTFSFLIEGDTKIVASKTELINLFEENHGVVGNLCLITGRYSKVVEITTATKILGSQETAKLVAFQVNSGYDSYGKSKGYNAPISEEAEFAYTTALNHLLRSDSHNRFMVGSRTYLFWASSNSEASKESENSLFSLLGRIEEENDDPNRRIKLVYDTFQSIYNGKLSANDDDKFFILGLAPNSARIAVVYWNEMPLREFAGLISKHFTDMEMVDTRKDKKPYLGLHSILGNVTLGGKSSDATPNLPDAVVRSIFQGLPYPASLFQACIRRIRTEQSVNIVRAAIIKAYLNRLNENNNHKKLDVMLDKENQNQGYLCGRLFAVLDKIQEDANGIHSIRERYMNAASATPSMVFATVLNLSTHHIEKLNPGGQVFYEKLKQEIISKLDAKGFPPHLNLQDQGRFFVGYYHQRQDLFMNKENKEME
>NZ_CP046427.1|WP_038607548.1|4629545_4630238_-|type-I-C-CRISPR-associated-protein-Cas5
MEYTDKEYCLEVWGDWACFTRPELKVERVSYDVITPSAARAIFEAILFKRYAMRWQITKIEVLRPIKWATIRRNEVGAVVNSSMKPIYIDDGKTRQQKNTLLLLDVRYRIYAKLVFIPVKDRPKEAFAKHQPSADENPMKYYQMFERRASQGQCFTQPYLGCREFSANWKYIESTDNLDNPLAEDRDFGIMLYDMDFEENPQKPNAMFYRAQMKKGVIVVPDKDSEEVLR
>NZ_CP046427.1|WP_007843558.1|4630239_4631100_-|Bro-N-domain-containing-protein
MTKKETLKLFEERKVRTVWDDEKEKWYFSIVDVVSVLTDSVDATAYWRKLKQRLKEEGNETVTNCHGLKMKAADGKMRLTDVADTEQLLRIIQSIPSPKAEPFKQWMAHVASERLDQMQDPELSIEQAMMDYKRLGYSDNWINQRLKSIEIRKDLTDQWKLHNVEEGVQYATLTDIIYQQWAGKSAKEYKQFKGLKKENLRDNMTNEELVLNMLAELSTTSITKAKNPQTLGENMQCAADGGDVARVAREQLEQKTGREVVTPLSAKRFFEGQKPEDLLENKENDE
>NZ_CP046427.1|WP_038604777.1|4631110_4633336_-|CRISPR-associated-helicase/endonuclease-Cas3
MIDEKQLISHLYQNRENGQWMIQTNDEHQKGVADMAASFAGQFGLPSWGRALGLLHDKGKERAAFQQYIRKMNGLPTSDKKRYDDHTHAFVGGILAKELMGKDVSHLLVNQIISHHTGLHNFGDVENILKERLLSEEINEGDISINKPLLFQEFIDSPFSKSKVEWKHFHHLSRMLFSCLVDADRLDTERFMDVESWRKRGNLATLVDLLPQLEVYMQKLQSNAADTKVNRIRRQVKEQCSRTSSSEKGFYSLTVPTGGGKTLSSLLWAMKHAVSHSMNRIIIAIPYTSIIVQTAGLLKEIFGEENVLEHHSNFDPDDIKDEENREKAKLATENWNYPIIVTTNVQLFESMFSNKTSDCRKLHNMANSILVLDEVQMLPTGFLQPIVDALKAYQEMFGISVLFTTASQPVLSGLIEGTNPKADFKGIEHIKEIIPEEFALHDQLRRVKLAIDDTGRTYDEIAAKMSEYNKVLCIVNTRKDAKELYDRLPNDGVKLHLSRMMCPAHLHETIGKIKTLLKDESLPIVRVIATQLVEAGVDIDFPVVFRQEAGLDSVLQAAGRCNREGRSAMGHTFVFSLAAEKRNPFGSMADSNNARLNLPEDSDWFAPSTMKAYFCQLYSRKQTFDEKDIKHWLYKPTELCFETASKEFRLIDDTSINVIVNWENSMELIEQLKESGCTYSLVKQLAKFTVGIRSYDFKQLKGYGLVEEILEGIYVLADRSQYNKATGLSLDNHWLEEVLMI
>NZ_CP046427.1|WP_038604780.1|4633668_4635033_-|histidine--tRNA-ligase
MAAKPGIPKGTRDFSPVEMAKRNYIFNTIRDVFHLFGYQQIETPSMENLSTLMGKYGDEGDKLLFKIQNSGDYFNGITDEELLSRNAVKLASKFCEKGLRYDLTVPFARYVVMHRDEISFPFKRYQIQPVWRADRPQKGRYREFYQCDADVVGSNSLLNEVELVQMIDRVFGKFGVRVSIKINNRKILTGIAEIIGEADKIVDITVAIDKLDKIGLENVNAELASKGIPQEAIDKLQPIILLSGSNEEKLETLKTVLAASETGMKGVEESEFILKTVSTLGVKSEVELDLTLARGLNYYTGAIFEVKALDVQIGSISGGGRYDNLTGVFGMDGMSGVGISFGADRIFDVLNQLDLYPKEAVNGTELLFVNFGDKEAAYCLPILAKVRETGVRAEIYPDAAKMKKQMGYANDKQIPFVAIVGENEMNEGKLTLKNMATGEQSLVTPDELLAVVKA
>NZ_CP046427.1|WP_008655266.1|4635193_4636042_-|substrate-binding-domain-containing-protein
MKRNYKIGLVMKSLQADFFKVMKEGAIQYAAPLPFLDLVCVGTATQTEVKEQIDLMYSLIHQQVDAIVLVPIDSKALVQPAVEAVRKGIPVINIDIQLDAQLLEQAGVEVAFVGPDNFAAAYEVGKLLGKKLRNEDKVAIIEGLAAADNARQRKRGFIKAIEEKGLRLVASEPADWETEKAAEVFQAMWMRYPDLKAVYCSNDAMALGVLQQMQEKKCYLPVVGFDNDAVMKEFLSTGKLVATADIFSSQMAVRGIEFALDVLEGRIENRGVHSTAYEIIKQ

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Identity
NZ_CP046427_2	2.3\|4624663\|35\|NZ_CP046427\|CRT	4624663-4624697	35	NZ_CP046427.1	845467-845501	1.0
NZ_CP046427_2	2.4\|4624732\|32\|NZ_CP046427\|CRT	4624732-4624763	32	NZ_CP046427.1	3597818-3597849	1.0
NZ_CP046427_2	2.6\|4624661\|36\|NZ_CP046427\|CRISPRCasFinder	4624661-4624696	36	NZ_CP046427.1	845468-845503	1.0
NZ_CP046427_2	2.7\|4624730\|33\|NZ_CP046427\|CRISPRCasFinder	4624730-4624762	33	NZ_CP046427.1	3597816-3597848	1.0
NZ_CP046427_2	2.9\|4624662\|36\|NZ_CP046427\|PILER-CR	4624662-4624697	36	NZ_CP046427.1	845467-845502	1.0
NZ_CP046427_2	2.10\|4624731\|33\|NZ_CP046427\|PILER-CR	4624731-4624763	33	NZ_CP046427.1	3597817-3597849	1.0

1. spacer 2.3|4624663|35|NZ_CP046427|CRT matches to position: 845467-845501, mismatch: 0, identity: 1.0

cgtattagttgacaatgtagagatggacataaata	CRISPR spacer
cgtattagttgacaatgtagagatggacataaata	Protospacer
***********************************

2. spacer 2.4|4624732|32|NZ_CP046427|CRT matches to position: 3597818-3597849, mismatch: 0, identity: 1.0

aacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
aacagctatctatttaaaaaacaagtttcttg	Protospacer
********************************

3. spacer 2.6|4624661|36|NZ_CP046427|CRISPRCasFinder matches to position: 845468-845503, mismatch: 0, identity: 1.0

ctcgtattagttgacaatgtagagatggacataaat	CRISPR spacer
ctcgtattagttgacaatgtagagatggacataaat	Protospacer
************************************

4. spacer 2.7|4624730|33|NZ_CP046427|CRISPRCasFinder matches to position: 3597816-3597848, mismatch: 0, identity: 1.0

ttaacagctatctatttaaaaaacaagtttctt	CRISPR spacer
ttaacagctatctatttaaaaaacaagtttctt	Protospacer
*********************************

5. spacer 2.9|4624662|36|NZ_CP046427|PILER-CR matches to position: 845467-845502, mismatch: 0, identity: 1.0

tcgtattagttgacaatgtagagatggacataaata	CRISPR spacer
tcgtattagttgacaatgtagagatggacataaata	Protospacer
************************************

6. spacer 2.10|4624731|33|NZ_CP046427|PILER-CR matches to position: 3597817-3597849, mismatch: 0, identity: 1.0

taacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
taacagctatctatttaaaaaacaagtttcttg	Protospacer
*********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP046427_1	1.1\|3662857\|40\|NZ_CP046427\|CRISPRCasFinder	3662857-3662896	40	BK010646	TPA_exp: Bacteroides phage p00, complete sequence	768-807	0	1.0
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	MN694639	Marine virus AFVG_250M766, complete genome	16844-16874	6	0.806
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	AP013378	Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S23-C32	25103-25133	6	0.806
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	NZ_AP017563	Pseudanabaena sp. ABRG5-3 plasmid ABRG53c, complete sequence	42293-42323	8	0.742
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	NC_041966	Acinetobacter phage WCHABP1, complete genome	34348-34378	8	0.742
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	MH853788	Acinetobacter phage vB_KpnM_IME512, complete genome	14966-14996	8	0.742
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	KY670595	Acinetobacter phage WCHABP12, complete genome	26517-26547	8	0.742
NZ_CP046427_2	2.1\|4624531\|31\|NZ_CP046427\|CRT	4624531-4624561	31	MN166083	Acinetobacter phage Abp9, complete genome	333-363	8	0.742
NZ_CP046427_2	2.4\|4624732\|32\|NZ_CP046427\|CRT	4624732-4624763	32	MN856079	Bacteriophage sp. isolate 128, complete genome	11703-11734	8	0.75
NZ_CP046427_2	2.4\|4624732\|32\|NZ_CP046427\|CRT	4624732-4624763	32	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	235309-235340	10	0.688
NZ_CP046427_2	2.7\|4624730\|33\|NZ_CP046427\|CRISPRCasFinder	4624730-4624762	33	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	235307-235339	10	0.697
NZ_CP046427_2	2.4\|4624732\|32\|NZ_CP046427\|CRT	4624732-4624763	32	MG945860	UNVERIFIED: Microviridae sp. isolate 17756-1502, complete genome	922-953	11	0.656
NZ_CP046427_2	2.4\|4624732\|32\|NZ_CP046427\|CRT	4624732-4624763	32	AP013716	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S38-C22, * SEQUENCING IN PROGRESS *	16405-16436	11	0.656
NZ_CP046427_2	2.10\|4624731\|33\|NZ_CP046427\|PILER-CR	4624731-4624763	33	NZ_LR134418	Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9	235308-235340	11	0.667

1. spacer 1.1|3662857|40|NZ_CP046427|CRISPRCasFinder matches to BK010646 (TPA_exp: Bacteroides phage p00, complete sequence) position: , mismatch: 0, identity: 1.0

atgaataagcaatcaaaacatttcgtttttgtaatagctt	CRISPR spacer
atgaataagcaatcaaaacatttcgtttttgtaatagctt	Protospacer
****************************************

2. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to MN694639 (Marine virus AFVG_250M766, complete genome) position: , mismatch: 6, identity: 0.806

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
tatggaagcagaaataaaaaaagtaaaagat	Protospacer
*************.***** ******  .*

3. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to AP013378 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G14, isolate: uvMED-CGR-U-MedDCM-OCT-S23-C32) position: , mismatch: 6, identity: 0.806

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
aatggaagcagaagtaaaaaaattaaaaaca	Protospacer
 ****************** ** ***  * *

4. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to NZ_AP017563 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53c, complete sequence) position: , mismatch: 8, identity: 0.742

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
aatggaagcagaaataagacaagttcctgaa	Protospacer
 ************.***.******  ...**

5. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to NC_041966 (Acinetobacter phage WCHABP1, complete genome) position: , mismatch: 8, identity: 0.742

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
cactgaagcagaagtaaagcaagtcatagag	Protospacer
.*. **************.***** ** .*.

6. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to MH853788 (Acinetobacter phage vB_KpnM_IME512, complete genome) position: , mismatch: 8, identity: 0.742

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
cactgaagcagaagtaaagcaagtcatagag	Protospacer
.*. **************.***** ** .*.

7. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to KY670595 (Acinetobacter phage WCHABP12, complete genome) position: , mismatch: 8, identity: 0.742

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
cactgaagcagaagtaaagcaagtcatagag	Protospacer
.*. **************.***** ** .*.

8. spacer 2.1|4624531|31|NZ_CP046427|CRT matches to MN166083 (Acinetobacter phage Abp9, complete genome) position: , mismatch: 8, identity: 0.742

tatggaagcagaagtaaaacaagtaatcaaa	CRISPR spacer
cactgaagcagaagtaaagcaagtcatagag	Protospacer
.*. **************.***** ** .*.

9. spacer 2.4|4624732|32|NZ_CP046427|CRT matches to MN856079 (Bacteriophage sp. isolate 128, complete genome) position: , mismatch: 8, identity: 0.75

aacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
agaatctacctatttaaaatacaagttttata	Protospacer
*. * ***.********** ********. *.

10. spacer 2.4|4624732|32|NZ_CP046427|CRT matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 10, identity: 0.688

aacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
ggtttgtatctttttaaaaaaccagtttctaa	Protospacer
...   ***** ********** ******* .

11. spacer 2.7|4624730|33|NZ_CP046427|CRISPRCasFinder matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 10, identity: 0.697

ttaacagctatctatttaaaaaacaagtttctt	CRISPR spacer
taggtttgtatctttttaaaaaaccagtttcta	Protospacer
* ...   ***** ********** *******

12. spacer 2.4|4624732|32|NZ_CP046427|CRT matches to MG945860 (UNVERIFIED: Microviridae sp. isolate 17756-1502, complete genome) position: , mismatch: 11, identity: 0.656

aacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
tttcgctatctatttaagaaagaagttgaaga	Protospacer
  . *************.*** *****    .

13. spacer 2.4|4624732|32|NZ_CP046427|CRT matches to AP013716 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C22-MedDCM-OCT-S38-C22, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.656

aacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
ggtttatatctatttaaaacaaaagtttcaca	Protospacer
...   ************* * ******* ..

14. spacer 2.10|4624731|33|NZ_CP046427|PILER-CR matches to NZ_LR134418 (Legionella adelaidensis strain NCTC12735 genome assembly, plasmid: 9) position: , mismatch: 11, identity: 0.667

taacagctatctatttaaaaaacaagtttcttg	CRISPR spacer
aggtttgtatctttttaaaaaaccagtttctaa	Protospacer
 ...   ***** ********** ******* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

468028 : 530337

Bacillus_phage(14.29%)

capsid,integrase,tRNA,protease,head,portal,terminase

attL 463550:463564|attR 509655:509669

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
463550:463564	attL	NA	NA	NA	NA
WP_005650581.1\|468028_469351_-\|integrase	site-specific integrase	H7BVW5	unidentified_phage	9.2e-169	99.7
WP_007833738.1\|470067_471915_+	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_007833723.1\|471938_472943_+	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_007841352.1\|473102_473762_-	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_038605368.1\|474022_475630_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	9.9e-125	49.7
WP_007833714.1\|475737_476388_+	nitroreductase family protein	NA	NA	NA	NA
WP_007841350.1\|476449_478252_-	translational GTPase TypA	A0A2K5B2A5	Erysipelothrix_phage	2.5e-23	27.9
WP_038605372.1\|478318_482440_-	response regulator	W8CYM9	Bacillus_phage	1.3e-11	38.1
WP_007833707.1\|482790_483396_-	DUF5033 domain-containing protein	NA	NA	NA	NA
WP_032935893.1\|483832_484402_+	DUF3575 domain-containing protein	NA	NA	NA	NA
WP_007833702.1\|484414_485875_+	DUF3868 domain-containing protein	NA	NA	NA	NA
WP_038605376.1\|486757_488518_+	fimbria major subunit	NA	NA	NA	NA
WP_008654352.1\|488606_489662_+	FimB/Mfa2 family fimbrial subunit	NA	NA	NA	NA
WP_007833690.1\|489684_490800_+	FimB/Mfa2 family fimbrial subunit	NA	NA	NA	NA
WP_170267833.1\|490840_493666_+	DUF4906 domain-containing protein	NA	NA	NA	NA
WP_007855525.1\|493667_493961_+	hypothetical protein	NA	NA	NA	NA
WP_007833684.1\|493960_494248_+	hypothetical protein	NA	NA	NA	NA
WP_038605379.1\|494320_495256_+	DUF5106 domain-containing protein	NA	NA	NA	NA
WP_005844439.1\|495334_495604_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_007841330.1\|495706_496192_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_007841328.1\|496203_496899_-	5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_038605381.1\|496983_499476_+	YfhO family protein	NA	NA	NA	NA
WP_007839159.1\|499502_500249_-	glycosyltransferase	A0A1V0SAH6	Catovirus	5.4e-09	32.1
WP_007841327.1\|500241_501504_-	glycosyltransferase	NA	NA	NA	NA
WP_038605383.1\|501516_502632_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_007848181.1\|502604_503621_-	hypothetical protein	NA	NA	NA	NA
WP_007839151.1\|503617_504433_-	LicD family protein	A0A1V0SAS8	Catovirus	5.4e-10	57.7
WP_038605386.1\|504429_505797_-	bifunctional cytidylyltransferase/SDR family oxidoreductase	NA	NA	NA	NA
WP_007848182.1\|505888_506719_+	glycosyl transferase	NA	NA	NA	NA
WP_038605389.1\|506741_507767_-	acyltransferase	NA	NA	NA	NA
WP_007839147.1\|507766_509203_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA
WP_007839146.1\|509284_511327_-\|tRNA	methionine--tRNA ligase	A0A2K9KZR3	Tupanvirus	1.5e-85	35.2
509655:509669	attR	NA	NA	NA	NA
WP_007841322.1\|511559_512642_+	TIGR04133 family radical SAM/SPASM protein	NA	NA	NA	NA
WP_007839141.1\|512653_513133_+	radical SAM-associated putative lipoprotein	NA	NA	NA	NA
WP_007839140.1\|513164_513653_+	radical SAM-associated putative lipoprotein	NA	NA	NA	NA
WP_007839139.1\|513707_513875_+	hypothetical protein	NA	NA	NA	NA
WP_134770160.1\|514583_516470_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	2.0e-07	21.1
WP_134770161.1\|516572_517778_+	DNA cytosine methyltransferase	F2Y148	Organic_Lake_phycodnavirus	5.1e-49	35.1
WP_134770162.1\|517778_518741_+	hypothetical protein	NA	NA	NA	NA
WP_134770163.1\|518818_519268_-	hypothetical protein	NA	NA	NA	NA
WP_134770164.1\|519300_519774_-	hypothetical protein	NA	NA	NA	NA
WP_165859763.1\|519864_520002_-	hypothetical protein	NA	NA	NA	NA
WP_117853095.1\|520561_522376_-	hypothetical protein	NA	NA	NA	NA
WP_117678198.1\|522997_523489_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_134770165.1\|523478_523775_-	HNH endonuclease	A0A075M5R4	Enterococcus_phage	4.6e-12	44.3
WP_134770166.1\|523749_524253_-	hypothetical protein	NA	NA	NA	NA
WP_117573198.1\|524236_524521_-	hypothetical protein	NA	NA	NA	NA
WP_117678201.1\|524675_525053_+\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_134770167.1\|525052_526681_+\|terminase	terminase large subunit	H9YSH1	environmental_Halophage	1.6e-90	35.2
WP_117853090.1\|526680_527913_+\|portal	phage portal protein	A0A0U4IJ43	Pseudomonas_phage	4.3e-51	37.2
WP_117573189.1\|527884_528226_+	hypothetical protein	NA	NA	NA	NA
WP_117573187.1\|528225_528597_+	hypothetical protein	NA	NA	NA	NA
WP_117573185.1\|528607_529156_+\|head,protease	HK97 family phage prohead protease	A0A1B1PA08	Enterococcus_phage	1.0e-28	40.7
WP_134770168.1\|529155_530337_+\|capsid	phage major capsid protein	K7XS73	uncultured_Mediterranean_phage	4.1e-35	32.5

DBSCAN-SWA_2

648462 : 680655

uncultured_virus(50.0%)

transposase,integrase

attL 672697:672711|attR 689005:689019

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005636919.1\|648462_649626_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005636924.1\|649865_651005_-	hypothetical protein	NA	NA	NA	NA
WP_005636926.1\|651037_652048_-	hypothetical protein	NA	NA	NA	NA
WP_080707039.1\|652604_652991_+	DUF4134 domain-containing protein	NA	NA	NA	NA
WP_005636934.1\|652996_653323_+	DUF4133 domain-containing protein	NA	NA	NA	NA
WP_005636936.1\|653319_655854_+	TraG family conjugative transposon ATPase	NA	NA	NA	NA
WP_005636939.1\|655850_656207_+	DUF3876 domain-containing protein	NA	NA	NA	NA
WP_005636941.1\|656203_656833_+	DUF4141 domain-containing protein	NA	NA	NA	NA
WP_005636943.1\|656835_657849_+	conjugative transposon protein TraJ	NA	NA	NA	NA
WP_005636947.1\|657972_658596_+	conjugative transposon protein TraK	NA	NA	NA	NA
WP_005656892.1\|658592_658892_+	DUF3989 domain-containing protein	NA	NA	NA	NA
WP_005636954.1\|658842_660150_+	conjugative transposon protein TraM	NA	NA	NA	NA
WP_005636955.1\|660199_661114_+	conjugative transposon protein TraN	NA	NA	NA	NA
WP_005636956.1\|661110_661698_+	conjugal transfer protein TraO	NA	NA	NA	NA
WP_005636957.1\|661719_662181_+	DUF3872 domain-containing protein	NA	NA	NA	NA
WP_005636958.1\|662177_662657_+	hypothetical protein	NA	NA	NA	NA
WP_004312011.1\|663164_664838_-\|transposase	IS66-like element ISBf10 family transposase	A0A218MNE7	uncultured_virus	2.1e-37	28.9
WP_004312010.1\|664913_665279_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004319780.1\|665282_665639_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_170267554.1\|665715_666393_-	hypothetical protein	NA	NA	NA	NA
WP_007851220.1\|666403_667423_-	molecular chaperone DnaJ	NA	NA	NA	NA
WP_005802673.1\|667436_667646_-	hypothetical protein	NA	NA	NA	NA
WP_005637786.1\|667621_667921_-	hypothetical protein	NA	NA	NA	NA
WP_038607716.1\|667917_668517_-	hypothetical protein	NA	NA	NA	NA
WP_007219084.1\|668564_669062_-	DUF4313 domain-containing protein	NA	NA	NA	NA
WP_005637783.1\|669112_669364_-	hypothetical protein	NA	NA	NA	NA
WP_007851207.1\|669433_670321_-	hypothetical protein	NA	NA	NA	NA
WP_007851204.1\|670324_671467_-	hypothetical protein	NA	NA	NA	NA
WP_005634950.1\|671451_671748_-	hypothetical protein	NA	NA	NA	NA
WP_005640474.1\|672160_672568_+	hypothetical protein	NA	NA	NA	NA
672697:672711	attL	NA	NA	NA	NA
WP_005640472.1\|673080_674316_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005640470.1\|674389_675595_-\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_005640468.1\|675862_677230_+	hypothetical protein	NA	NA	NA	NA
WP_005640456.1\|677677_677845_+	hypothetical protein	NA	NA	NA	NA
WP_005640453.1\|677951_679241_+\|transposase	IS1380-like element ISBvu1 family transposase	NA	NA	NA	NA
WP_005864602.1\|679419_680655_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-33	36.3
689005:689019	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2034003 : 2149798

105

unidentified_phage(16.67%)

transposase,integrase,tRNA

attL 2038211:2038227|attR 2120553:2120575

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074706201.1\|2034003_2035131_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.3e-14	28.1
WP_074706198.1\|2035434_2036580_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_074706193.1\|2037567_2037930_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_074706190.1\|2037926_2038376_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
2038211:2038227	attL	NA	NA	NA	NA
WP_074706188.1\|2038372_2039461_+	AAA family ATPase	NA	NA	NA	NA
2038211:2038227	attL	NA	NA	NA	NA
WP_074706185.1\|2039524_2039707_+	DNA primase	NA	NA	NA	NA
WP_004308094.1\|2040254_2042063_+	maturase	A0A0U4J920	Pseudomonas_phage	6.3e-27	28.2
WP_117921379.1\|2042067_2042889_+	toprim domain-containing protein	NA	NA	NA	NA
WP_117601517.1\|2042969_2044406_+	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_170267840.1\|2045448_2047059_+	AAA family ATPase	NA	NA	NA	NA
WP_117601518.1\|2047045_2048044_+	hypothetical protein	NA	NA	NA	NA
WP_117601519.1\|2048142_2049276_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	2.6e-15	21.0
WP_117601520.1\|2049757_2050177_+	hypothetical protein	NA	NA	NA	NA
WP_117601521.1\|2050166_2050502_+	DUF4134 domain-containing protein	NA	NA	NA	NA
WP_117601522.1\|2050558_2050924_+	DUF4134 domain-containing protein	NA	NA	NA	NA
WP_117601523.1\|2050930_2051233_+	DUF4133 domain-containing protein	NA	NA	NA	NA
WP_117601524.1\|2051229_2052774_+	hypothetical protein	NA	NA	NA	NA
WP_117601525.1\|2052795_2053209_+	hypothetical protein	NA	NA	NA	NA
WP_117601526.1\|2053214_2055923_+	TraG family conjugative transposon ATPase	NA	NA	NA	NA
WP_117601527.1\|2055935_2056259_+	hypothetical protein	NA	NA	NA	NA
WP_170267575.1\|2056281_2058840_+	hypothetical protein	NA	NA	NA	NA
WP_117601529.1\|2058832_2059558_+	hypothetical protein	NA	NA	NA	NA
WP_117601541.1\|2059602_2060349_+	DUF5045 domain-containing protein	NA	NA	NA	NA
WP_170267536.1\|2060679_2061159_+	hypothetical protein	NA	NA	NA	NA
WP_004311699.1\|2061436_2061769_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004311700.1\|2061773_2062121_+	hypothetical protein	NA	NA	NA	NA
WP_170267576.1\|2062193_2062844_+	hypothetical protein	NA	NA	NA	NA
WP_170267577.1\|2063045_2063417_+	antitoxin ParD	NA	NA	NA	NA
WP_170267578.1\|2063431_2064655_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_170267842.1\|2064714_2065239_+	hypothetical protein	NA	NA	NA	NA
WP_170267579.1\|2065368_2066286_-	hypothetical protein	NA	NA	NA	NA
WP_170267580.1\|2066369_2067017_-	hypothetical protein	NA	NA	NA	NA
WP_170267581.1\|2067348_2067753_-	hypothetical protein	NA	NA	NA	NA
WP_170267582.1\|2068165_2068810_-	recombinase family protein	A0A2K5B2B2	Erysipelothrix_phage	8.8e-08	26.7
WP_074557834.1\|2068968_2070129_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_170267584.1\|2070125_2071307_-\|integrase	site-specific integrase	A0A160DFA7	Gordonia_phage	3.6e-07	41.1
WP_170267586.1\|2072677_2074420_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-41	30.9
WP_004292668.1\|2074426_2076223_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.0e-34	28.4
WP_170267588.1\|2076226_2076925_-	hypothetical protein	NA	NA	NA	NA
WP_004292663.1\|2076921_2077599_-	hypothetical protein	NA	NA	NA	NA
WP_004292661.1\|2077595_2078390_-	methyltransferase domain-containing protein	A0A0N9SHZ9	Staphylococcus_phage	2.7e-46	41.4
WP_004292659.1\|2078379_2079186_-	hypothetical protein	NA	NA	NA	NA
WP_004292658.1\|2079169_2080279_-	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA
WP_004292655.1\|2080283_2081366_-	saccharopine dehydrogenase NADP-binding domain-containing protein	NA	NA	NA	NA
WP_004292650.1\|2082056_2083244_-	hypothetical protein	NA	NA	NA	NA
WP_004292649.1\|2083282_2085655_-	TonB-dependent receptor	NA	NA	NA	NA
WP_004292648.1\|2085693_2086284_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_005942627.1\|2086286_2092451_-	non-ribosomal peptide synthetase	A0A2K9L3I8	Tupanvirus	4.3e-59	27.6
WP_004312210.1\|2092915_2093338_-\|integrase	integrase	NA	NA	NA	NA
WP_004292644.1\|2093365_2093902_-	hypothetical protein	NA	NA	NA	NA
WP_004292643.1\|2093908_2095141_-	hypothetical protein	NA	NA	NA	NA
WP_170267590.1\|2095137_2095575_-	metalloproteinase	NA	NA	NA	NA
WP_005942618.1\|2095716_2096232_-	hypothetical protein	NA	NA	NA	NA
WP_004292640.1\|2096343_2096817_-	hypothetical protein	NA	NA	NA	NA
WP_004292639.1\|2096847_2097090_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004312207.1\|2097323_2097737_-	hypothetical protein	NA	NA	NA	NA
WP_004312206.1\|2097733_2098354_-	hypothetical protein	NA	NA	NA	NA
WP_004292637.1\|2098359_2099790_-	ATP-binding protein	NA	NA	NA	NA
WP_004292636.1\|2100099_2101245_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.1e-13	30.3
WP_004292635.1\|2101259_2102402_-\|integrase	site-specific integrase	A0A1Y0T0H2	Sinorhizobium_phage	3.9e-06	24.7
WP_032837977.1\|2103247_2103538_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
2103406:2103422	attR	NA	NA	NA	NA
WP_118201256.1\|2103540_2103849_+	hypothetical protein	NA	NA	NA	NA
2103406:2103422	attR	NA	NA	NA	NA
WP_170267592.1\|2103893_2104502_+	hypothetical protein	NA	NA	NA	NA
WP_170267594.1\|2104776_2106213_+	plasmid recombination protein	NA	NA	NA	NA
WP_170267596.1\|2106202_2107234_-	hypothetical protein	NA	NA	NA	NA
WP_170267597.1\|2107282_2108089_-\|integrase	tyrosine-type recombinase/integrase	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	29.8
WP_170267600.1\|2108149_2109466_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_170267843.1\|2109445_2110015_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_170267602.1\|2109993_2110584_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_170267603.1\|2110580_2112134_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_170267605.1\|2112149_2112656_-	hypothetical protein	NA	NA	NA	NA
WP_170267607.1\|2112696_2113722_-	DUF1016 domain-containing protein	Q9JMP5	Wolbachia_phage	1.2e-38	30.4
WP_060451265.1\|2113759_2115271_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_170267608.1\|2115285_2117682_-	DEAD/DEAH box helicase family protein	A0A0S0N4Y4	Pseudomonas_phage	2.3e-08	25.1
WP_005680006.1\|2117748_2117955_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_170267610.1\|2118121_2119276_-\|integrase	site-specific integrase	Q7Y5X7	Haemophilus_phage	4.6e-07	29.8
WP_057256683.1\|2119300_2120467_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.1e-11	27.8
WP_170267845.1\|2120665_2121010_+	hypothetical protein	NA	NA	NA	NA
WP_117601531.1\|2121089_2121704_+	conjugative transposon protein TraK	NA	NA	NA	NA
WP_117601532.1\|2121705_2122047_+	hypothetical protein	NA	NA	NA	NA
WP_117601533.1\|2122024_2123275_+	conjugative transposon protein TraM	NA	NA	NA	NA
WP_005836155.1\|2123329_2124175_+	conjugative transposon protein TraN	NA	NA	NA	NA
WP_117601534.1\|2124164_2124707_+	hypothetical protein	NA	NA	NA	NA
WP_117601542.1\|2124865_2125525_+	DUF1566 domain-containing protein	NA	NA	NA	NA
WP_117601535.1\|2125543_2127727_+	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_005836159.1\|2127912_2128779_-	WG repeat-containing protein	NA	NA	NA	NA
WP_005836161.1\|2128784_2129321_-	hypothetical protein	NA	NA	NA	NA
WP_005836163.1\|2129534_2129939_-	hypothetical protein	NA	NA	NA	NA
WP_005836165.1\|2129949_2131623_-	hypothetical protein	NA	NA	NA	NA
WP_170267611.1\|2135600_2135873_+	hypothetical protein	NA	NA	NA	NA
WP_005837668.1\|2135901_2136132_+	hypothetical protein	NA	NA	NA	NA
WP_005837665.1\|2136422_2137184_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_005837664.1\|2137321_2139934_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	9.1e-152	39.8
WP_080597355.1\|2139979_2140219_-	hypothetical protein	NA	NA	NA	NA
WP_170267613.1\|2140860_2142108_+	hypothetical protein	NA	NA	NA	NA
WP_170267846.1\|2142135_2142846_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA
WP_117601537.1\|2142842_2144063_+	hypothetical protein	NA	NA	NA	NA
WP_005836173.1\|2144064_2145252_+	aminotransferase class V-fold PLP-dependent enzyme	A0A2K9L2Y3	Tupanvirus	2.2e-52	29.8
WP_005836176.1\|2145261_2146161_+	radical SAM protein	NA	NA	NA	NA
WP_005836178.1\|2146181_2147147_+	U32 family peptidase	NA	NA	NA	NA
WP_005836181.1\|2147164_2148067_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_005837659.1\|2148071_2148575_+	flavin reductase	NA	NA	NA	NA
WP_157447735.1\|2148777_2148939_-\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_080597322.1\|2148892_2149135_-\|transposase	transposase	NA	NA	NA	NA
WP_005836186.1\|2149171_2149798_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

2611058 : 2663479

Catovirus(16.67%)

transposase,integrase

attL 2606688:2606705|attR 2670668:2670685

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2606688:2606705	attL	NA	NA	NA	NA
WP_008652199.1\|2611058_2612261_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_008673486.1\|2612740_2613574_+	transcriptional regulator	NA	NA	NA	NA
WP_008673484.1\|2613767_2615135_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_008673480.1\|2615889_2616600_+	glycosyltransferase	A0A1V0SAH6	Catovirus	1.7e-07	34.1
WP_008673478.1\|2616645_2617806_+	glycosyltransferase	NA	NA	NA	NA
WP_038606474.1\|2617956_2619072_+	EpsG family protein	NA	NA	NA	NA
WP_008673476.1\|2619162_2620053_+	glycosyltransferase	NA	NA	NA	NA
WP_008673475.1\|2620087_2620867_+	DUF4422 domain-containing protein	NA	NA	NA	NA
WP_038607922.1\|2620913_2622047_+	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.6e-132	61.4
WP_008673473.1\|2622043_2623171_+	hypothetical protein	NA	NA	NA	NA
WP_008673472.1\|2623186_2624200_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_032933899.1\|2624196_2625006_+	YjbH domain-containing protein	NA	NA	NA	NA
WP_038606478.1\|2625083_2626046_+\|transposase	PD-(D/E)XK nuclease family transposase	NA	NA	NA	NA
WP_008652163.1\|2626302_2626800_-	N-acetylmuramoyl-L-alanine amidase	A0A0F7LBB1	uncultured_marine_virus	2.8e-25	43.0
WP_004312011.1\|2627199_2628873_-\|transposase	IS66-like element ISBf10 family transposase	A0A218MNE7	uncultured_virus	2.1e-37	28.9
WP_004312010.1\|2628948_2629314_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004319780.1\|2629317_2629674_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_004295303.1\|2630189_2630951_+	hypothetical protein	NA	NA	NA	NA
WP_005641960.1\|2630958_2631885_+\|integrase	phage integrase SAM-like domain-containing protein	NA	NA	NA	NA
WP_004295301.1\|2631953_2632874_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_004295300.1\|2633153_2634308_+	lactonase family protein	NA	NA	NA	NA
WP_038606159.1\|2634332_2635940_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_170267649.1\|2637110_2639807_+	SusC/RagA family TonB-linked outer membrane protein	NA	NA	NA	NA
WP_005641955.1\|2639819_2641436_+	RagB/SusD family nutrient uptake outer membrane protein	NA	NA	NA	NA
WP_005835699.1\|2641445_2642048_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_038606157.1\|2642152_2642341_-	hypothetical protein	NA	NA	NA	NA
WP_005641953.1\|2643193_2643751_+	DUF296 domain-containing protein	NA	NA	NA	NA
WP_004295292.1\|2643877_2645050_+	aldo/keto reductase	NA	NA	NA	NA
WP_005641952.1\|2645057_2646089_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_038606154.1\|2646131_2646671_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_004295287.1\|2649139_2649349_+	hypothetical protein	NA	NA	NA	NA
WP_005641945.1\|2649510_2649963_+	ferritin	NA	NA	NA	NA
WP_005650034.1\|2650065_2650713_+	MarC family protein	NA	NA	NA	NA
WP_004295284.1\|2650763_2651246_+	ferritin	NA	NA	NA	NA
WP_004295283.1\|2651274_2652324_+	class I fructose-bisphosphate aldolase	NA	NA	NA	NA
WP_051924150.1\|2652337_2653135_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	A0A1X9IGJ2	Lactococcus_phage	5.1e-05	29.6
WP_004295281.1\|2653155_2653584_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_005641942.1\|2653669_2654125_+	RNA polymerase sigma factor	A0A076YQ50	Rhizobium_phage	9.0e-07	27.0
WP_004295279.1\|2654190_2655174_+	6-phosphofructokinase	NA	NA	NA	NA
WP_005835662.1\|2655187_2657434_+	cation:proton antiporter	NA	NA	NA	NA
WP_038606150.1\|2657455_2660014_+	alpha-glucan family phosphorylase	NA	NA	NA	NA
WP_004295276.1\|2660030_2660840_+	arginase family protein	NA	NA	NA	NA
WP_004295275.1\|2660894_2661431_+	methylglyoxal synthase	NA	NA	NA	NA
WP_004295273.1\|2662243_2662465_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005641938.1\|2662689_2663061_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_005650024.1\|2663014_2663479_+\|transposase	IS5 family transposase	NA	NA	NA	NA
2670668:2670685	attR	NA	NA	NA	NA

DBSCAN-SWA_5

3498897 : 3518172

unidentified_phage(33.33%)

transposase,integrase

attL 3498410:3498427|attR 3528757:3528774

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3498410:3498427	attL	NA	NA	NA	NA
WP_005864602.1\|3498897_3500133_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.4e-33	36.3
WP_170267676.1\|3500311_3501601_-\|transposase	IS1380-like element ISBvu1 family transposase	NA	NA	NA	NA
WP_005640456.1\|3501707_3501875_-	hypothetical protein	NA	NA	NA	NA
WP_005640468.1\|3502322_3503690_-	hypothetical protein	NA	NA	NA	NA
WP_005640470.1\|3503957_3505163_+\|transposase	IS1380 family transposase	NA	NA	NA	NA
WP_005640472.1\|3505236_3506472_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_005640474.1\|3506984_3507392_-	hypothetical protein	NA	NA	NA	NA
WP_005634950.1\|3507804_3508101_+	hypothetical protein	NA	NA	NA	NA
WP_007851204.1\|3508085_3509228_+	hypothetical protein	NA	NA	NA	NA
WP_007851207.1\|3509231_3510119_+	hypothetical protein	NA	NA	NA	NA
WP_005637783.1\|3510188_3510440_+	hypothetical protein	NA	NA	NA	NA
WP_007219084.1\|3510490_3510988_+	DUF4313 domain-containing protein	NA	NA	NA	NA
WP_038607716.1\|3511035_3511635_+	hypothetical protein	NA	NA	NA	NA
WP_005637786.1\|3511631_3511931_+	hypothetical protein	NA	NA	NA	NA
WP_005802673.1\|3511906_3512116_+	hypothetical protein	NA	NA	NA	NA
WP_007851220.1\|3512129_3513149_+	molecular chaperone DnaJ	NA	NA	NA	NA
WP_170267554.1\|3513159_3513837_+	hypothetical protein	NA	NA	NA	NA
WP_004319780.1\|3513913_3514270_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_004312010.1\|3514273_3514639_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_004312011.1\|3514714_3516388_+\|transposase	IS66-like element ISBf10 family transposase	A0A218MNE7	uncultured_virus	2.1e-37	28.9
WP_005942649.1\|3517212_3518172_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	3.0e-20	26.3
3528757:3528774	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP046427.1|WP_004291533.1|215997_216414_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP046427.1|WP_004291533.1|215997_216414_-|hypothetical-protein

215997_216414_-

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5571428571428572	0.9855072463768116	0.9929078014184397

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP046427

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information