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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP053194 Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37d, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053192 Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37b, complete sequence 0 crisprs DEDDh 0 0 0 0
NZ_CP053190 Enterobacter hormaechei strain EGYMCRVIM chromosome, complete genome 1 crisprs WYL,DEDDh,csa3,DinG,cas3,cas14j 0 1 5 0
NZ_CP053193 Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37c, complete sequence 0 crisprs DEDDh 0 0 1 0
NZ_CP053191 Enterobacter hormaechei strain EGYMCRVIM plasmid pMS-37a, complete sequence 0 crisprs csa3 0 0 2 0

Results visualization

1. NZ_CP053190
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053190_1 2033348-2033471 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP053190_1 1.1|2033391|38|NZ_CP053190|CRISPRCasFinder 2033391-2033428 38 NZ_CP043437 Enterobacter sp. LU1 plasmid unnamed 113727-113764 2 0.947

1. spacer 1.1|2033391|38|NZ_CP053190|CRISPRCasFinder matches to NZ_CP043437 (Enterobacter sp. LU1 plasmid unnamed) position: , mismatch: 2, identity: 0.947

cagacgcaagatggtgcgttcaattggactcgaaccaa	CRISPR spacer
cagacgcagaatggtgcgttcaattggactcgaaccaa	Protospacer
********..****************************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1131765 : 1174282 65 Salmonella_phage(22.64%) head,holin,integrase,tail,terminase attL 1131706:1131761|attR 1179881:1179936
DBSCAN-SWA_2 1790918 : 1900361 137 Enterobacteria_phage(23.81%) capsid,portal,transposase,head,holin,integrase,protease,tail,terminase,tRNA,plate attL 1820368:1820390|attR 1870038:1870060
DBSCAN-SWA_3 2936123 : 2943870 7 Bodo_saltans_virus(16.67%) NA NA
DBSCAN-SWA_4 3354152 : 3422450 71 Cronobacter_phage(17.02%) terminase,holin,tRNA,tail NA
DBSCAN-SWA_5 3427704 : 3443290 21 Enterobacteria_phage(42.86%) integrase attL 3436513:3436525|attR 3440878:3440890
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP053193
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 107534 120 Salmonella_phage(93.4%) portal,tail,protease,integrase,terminase attL 1067:1089|attR 108156:108178
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP053191
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 59136 : 102104 42 Acinetobacter_phage(20.0%) protease,transposase,integrase attL 70177:70189|attR 105389:105401
DBSCAN-SWA_2 105717 : 157784 54 uncultured_Caudovirales_phage(28.57%) transposase,integrase attL 122431:122490|attR 133325:133555
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage