CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053210	Streptococcus pneumoniae strain 6A-10 chromosome, complete genome	6 crisprs	DEDDh,csa3,PrimPol,cas3,DinG,RT	1	3	11	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053210_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_1

11385-11484

Unclear

Consensus_repeat	Method
TGGTTGTTTCTTATACAGTTTTT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP053210_1

>merge|NZ_CP053210|1|11385-11484|CRISPRCasFinder
TGGTTGTTTCTTATACAGTTTTTCCTGTCGCATGCCTCATGCTCTCGGTCGCCAAATTTCTGAGCGTGGGTCTTTTTGAGTTGTTTCTTATACAGTTTTT

>NZ_CP053210|1|1|11385-11484|CRISPRCasFinder
TGGTTGTTTCTTATACAGTTTTT	CCTGTCGCATGCCTCATGCTCTCGGTCGCCAAATTTCTGAGCGTGGGTCTTTTT
GAGTTGTTTCTTATACAGTTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_000369225.1\|12392_13130_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP053210.1\|WP_029745112.1\|13645_13948_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000122652.1\|10112_10406_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000158206.1\|8522_9383_-\|primase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|214926
NZ_CP053210.1\|WP_000704695.1\|14176_15343_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP053210.1\|WP_001156571.1\|12010_12226_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP053210.1\|WP_000694581.1\|6205_6379_-\|sporulation-protein-Cse60	unknown	unknown	unknown
NZ_CP053210.1\|WP_001003748.1\|10402_10618_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000393070.1\|10816_11269_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000163931.1\|16648_17218_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
NZ_CP053210.1\|WP_001218707.1\|15462_16578_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP053210.1\|WP_000492128.1\|9522_9798_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000058847.1\|9790_10132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_001234978.1\|20785_21052_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP053210.1\|WP_000171265.1\|10619_10820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000173109.1\|5662_6187_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000041909.1\|21044_21413_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|225471
NZ_CP053210.1\|WP_000258104.1\|17218_20728_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP053210.1\|WP_000264046.1\|6988_8443_-\|DNA-primase	unknown	unknown	gnl\|CDD\|273716
NZ_CP053210.1\|WP_001009512.1\|11728_11914_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_000369225.1\|12392_13130_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.26226e-17
NZ_CP053210.1\|WP_000258104.1\|17218_20728_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_CP053210.1\|WP_000163931.1\|16648_17218_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	1.08887e-98
NZ_CP053210.1\|WP_001234978.1\|20785_21052_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.06015e-32
NZ_CP053210.1\|WP_000158206.1\|8522_9383_-\|primase-C-terminal-domain-containing-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	9.00589e-18
NZ_CP053210.1\|WP_000704695.1\|14176_15343_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.76232e-44
NZ_CP053210.1\|WP_000041909.1\|21044_21413_+\|septum-formation-initiator-family-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	1.34216e-20
NZ_CP053210.1\|WP_001156571.1\|12010_12226_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.65008e-09
NZ_CP053210.1\|WP_000264046.1\|6988_8443_-\|DNA-primase	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	4.35615e-64
NZ_CP053210.1\|WP_001218707.1\|15462_16578_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0

>NZ_CP053210.1|WP_000393070.1|10816_11269_-|hypothetical-protein
MEETAYENLTRRIDRISAEMREIGEKTGLSRLSLLASQTKFIKEELSRLLWIELPELNDSHKIEAVSKSTTGIFFSPGIFEMDAMRKAFFKRQAKHFFDNEADQQAYIEHTEKEYLGATVTLKDILFNSKNGTQKANKSCLIEKFEEAMQ
>NZ_CP053210.1|WP_000171265.1|10619_10820_-|hypothetical-protein
MTLDLGKMTQAEFDKQMAEIKERNPNIFQLISDFLDRKVTPEEVDEFLKMERAEQVEYIKNYQARV
>NZ_CP053210.1|WP_001003748.1|10402_10618_-|hypothetical-protein
MNELDISNTQAAVLIVILIGLLLYLNHRDRKKSAQIERENQQTIKTPSEDLNPEYGRYIQLAGVNVWGGME
>NZ_CP053210.1|WP_000122652.1|10112_10406_-|hypothetical-protein
MSYTMNLYPDIEKIPDETYFTKEIFLATCLNNTIRIAVARGVLTSQLLDKETKEVVCKTLDTIIENQKAILQGVASGQITFLNKSKGEEELDESIRE
>NZ_CP053210.1|WP_000058847.1|9790_10132_-|hypothetical-protein
MSLSENDKRVLRLIKVGAENSITGSEISLTTKLTERTVRDIIKRLVVKHNIPIVGVRCGVFSGYFIPANKGELLDGAKAFYNQVQEESKRLAVLMNSDLESYKETLKEVGGYV
>NZ_CP053210.1|WP_000492128.1|9522_9798_-|hypothetical-protein
MFSLSRESEHDLTHGILEVVERYLEAREKVPPRLTKLINRVELKEELKISDNTLNKWESQGLRRYQPPDDGARIIFYLVDDIRRFMGVENG
>NZ_CP053210.1|WP_000158206.1|8522_9383_-|primase-C-terminal-domain-containing-protein
MTIYEARGFQSNLVYPFDKMEPFQYIERFKPLVVPESADPEEYKRTQAPYCLSGKVMPEKNGSYKRNNTSLIYRDLIFLDYDDIQGTTEDFIEAVSSALFGYSYILYPTIKHSIEKPRFRLVVKSNNVMNEATYKQVVKEIADKIGLPFDMASLTWSQLQGLPVTTGDPATYQKIVEHGLDYPVPKVEPRAKQGTTELYKPRASGQRSMTMRIIDTLFNGFGDEGGRNVALTRFVGLLFNKWVDCDLETAYELTKIANSVTVEPLPIEELDRTFSSIARAEYRKRG
>NZ_CP053210.1|WP_000264046.1|6988_8443_-|DNA-primase
MWELYSRIWELGDQWRKKNSYIVNEGKKNERVEIPRPSVAIVAKALQEICHFTFIGEGVISDISKLYLYHLDLGHYVSSNDIFRKLLLKYDSRLTSNKFFLELISYIRTETKMKPPLDDYRYIPVANGVYNIKTHKLEEFSPNFVITSKIQTEYNPCARKPILDGWFDFDRWLEALAVNDKEVVALLWQVINEAINPNRTRKKMVLMVGDGNNGKGTFQTLLENLIGRSNISNLKPDQFGKEFYLGALEGKVCNIGDDISNKYLDEVSDLMSVISGDPVQVNKKSLQPVEARFRLLCIFSGNDLPRARNKTMGWYRRLCIIPFRADFNGQKERHEIKDRFIKNKELLEWVLFKVLNMPDFDSFIEPEAVKEMLSKYKNDNDYIKVWVENFYIPNGWHAINHVPMFIARNKLKEFAEDIGIDKPKLGQFSNAVIALLEKSTPYKYTSKNGTVSPKFYEALDPQGFHRNRINKGVWGIHLEDEDLG
>NZ_CP053210.1|WP_000694581.1|6205_6379_-|sporulation-protein-Cse60
MKIKLFYQKYKQALWDLESQVNGFMADVEVIDVKYTKATVGNSEDMDTLTSVMVLYK
>NZ_CP053210.1|WP_000173109.1|5662_6187_-|hypothetical-protein
MTLKTFSDKAKTFNFTYEFKDQDTAQVAGSALMGYMIGTYEVPSISITYKNKGTLAAEYVEDKELNYIFKRICDSFKGCYKQPEGDEAFEERYKRERVLQLKESEDFESLLNKVTDYELKLLDYAERLLSDKPILMNSMTAFGTLEMLGNESINLFQKLDVEGEYKGLADYSGQ
>NZ_CP053210.1|WP_001009512.1|11728_11914_-|hypothetical-protein
MNFKEFKTWLDDAVSVAEAMALPENKGVLDDLIENTANNLAFIAELVESRQLIYRKPRHED
>NZ_CP053210.1|WP_001156571.1|12010_12226_-|helix-turn-helix-transcriptional-regulator
MQEKLLILRKKQGISQQELADYLKISVTSYGQKERGEKAFTLDEMFALSTFFELSISEIFLPRKSPKKRHN
>NZ_CP053210.1|WP_000369225.1|12392_13130_+|helix-turn-helix-domain-containing-protein
MDNLAQHVGEKIKFFRKENGWTQSVLAEKMSTSKQTISKYEKGIIKVNQDTIFKLADIFGVSIDSFFPSIIEEIATTSPIQSIYDQLTPPRQEKALTYLKKQLLEQKNENIVSENIISLDDYRESKTLPVIGVVTAGNGITQDDNLNMEKCFYTDEIPDDYDAIAYVVGNSMEPKIKNGDYLFIKNTPQVDYNTIGIFQVDGANYVKKLRQGYLESLNPECADIQLDEDNDIRTIGEVVSIYREK
>NZ_CP053210.1|WP_029745112.1|13645_13948_+|hypothetical-protein
MGTYTNLGTKALYLIATLPAEEKQAQIDRIEQGDNPTVRELQDLKLKFSAAKRKIMELQKGQEPTKEIVKEVPVIPADYQEALQNRQQLEERAKSAEERN
>NZ_CP053210.1|WP_000704695.1|14176_15343_+|site-specific-integrase
MKITEYTKKDGTTVYRSSVYLGIDTVTGKKVKTTISGRTKRELRNKALQAQIDFEKNGSTVFKAVQINTYAELVENWLETYCHTVKKSTLMGTKFKIDKYLLPAFGNYRLDKLTPPIIQKQVNQWAKDYNQLGKGFQEYPLLHSLNKRILKYAVSLQAIPFNPARDVIVPRRKEKEGQKLKYLDDDNLKKFLTYLEQLPNTYKNFFDTVLYKTLLATGLRIRECLALEWSDIDLKNGTLDVNKTLNIIKEITGPKTKSSVRMIDLDNKTVLMLRLYKARQSQIGKEMGLTYEKVFSNSFDKHIDARMLSFRLVKHLERAGCPRFTFHAFRHTHASILLNAGLPYKEIQTRLGHAKLSMTMDIYSHLSKDNQKNATSFYEKAIEKLKSS
>NZ_CP053210.1|WP_001218707.1|15462_16578_+|redox-regulated-ATPase-YchF
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
>NZ_CP053210.1|WP_000163931.1|16648_17218_+|aminoacyl-tRNA-hydrolase
MTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVKYYLQEKNFEKTMQRYNG
>NZ_CP053210.1|WP_000258104.1|17218_20728_+|transcription-repair-coupling-factor
MVTLLDLFSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDRIVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTLSPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFFDDYQKLMNQYEVFERDLAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPVTFFSNLQKGLGNLKFDKIYQFNQYSMQEFFNQFSFLKEEIERYKKMDYTIILQSSNSMGSKTLEDMLEEYQIKLDSRDKTSICKESVNLIEGNLRHGFHFVDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNVDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGNANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFEKVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGLLIFGESLLEIKESKEENSI
>NZ_CP053210.1|WP_001234978.1|20785_21052_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIISETRVEENV
>NZ_CP053210.1|WP_000041909.1|21044_21413_+|septum-formation-initiator-family-protein
MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR

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Crispr_ID: NZ_CP053210_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_2

13363-13442

Unclear

Consensus_repeat	Method
TGGAATTTACTTAGAAAATAAAAAA	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP053210_2

>merge|NZ_CP053210|2|13363-13442|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAATAGTTGATTTAACAACGTTTTTAGCCTACTTGGAATTTACTTGGAAAATAAAAAA

>NZ_CP053210|2|2|13363-13442|CRISPRCasFinder
TGGAATTTACTTAGAAAATAAAAAA	TAGTTGATTTAACAACGTTTTTAGCCTACT
TGGAATTTACTTGGAAAATAAAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_000369225.1\|12392_13130_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP053210.1\|WP_001224760.1\|21532_22801_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|225242
NZ_CP053210.1\|WP_029745112.1\|13645_13948_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000171265.1\|10619_10820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000158206.1\|8522_9383_-\|primase-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|214926
NZ_CP053210.1\|WP_000704695.1\|14176_15343_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271189
NZ_CP053210.1\|WP_001003748.1\|10402_10618_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000393070.1\|10816_11269_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000892185.1\|24078_24621_+\|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|223707
NZ_CP053210.1\|WP_001218707.1\|15462_16578_+\|redox-regulated-ATPase-YchF	unknown	unknown	gnl\|CDD\|236583
NZ_CP053210.1\|WP_000492128.1\|9522_9798_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000058847.1\|9790_10132_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_001234978.1\|20785_21052_+\|RNA-binding-S4-domain-containing-protein	unknown	unknown	gnl\|CDD\|224109
NZ_CP053210.1\|WP_000122652.1\|10112_10406_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_001156571.1\|12010_12226_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP053210.1\|WP_000041909.1\|21044_21413_+\|septum-formation-initiator-family-protein	unknown	unknown	gnl\|CDD\|225471
NZ_CP053210.1\|WP_000258104.1\|17218_20728_+\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_CP053210.1\|WP_001208993.1\|22797_24075_+\|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl\|CDD\|238950
NZ_CP053210.1\|WP_000163931.1\|16648_17218_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|223271
NZ_CP053210.1\|WP_001009512.1\|11728_11914_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_000369225.1\|12392_13130_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	6.26226e-17
NZ_CP053210.1\|WP_001224760.1\|21532_22801_+\|serine-hydrolase	gnl\|CDD\|225242	COG2367, PenP, Beta-lactamase class A [Defense mechanisms].	1.61579e-74
NZ_CP053210.1\|WP_001208993.1\|22797_24075_+\|tRNA-lysidine(34)-synthetase-TilS	gnl\|CDD\|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	1.79221e-68
NZ_CP053210.1\|WP_000158206.1\|8522_9383_-\|primase-C-terminal-domain-containing-protein	gnl\|CDD\|214926	smart00942, PriCT_1, Primase C terminal 1 (PriCT-1). This alpha helical domain is found at the C terminal of primases.	9.00589e-18
NZ_CP053210.1\|WP_000704695.1\|14176_15343_+\|site-specific-integrase	gnl\|CDD\|271189	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons. This family of tyrosine based site-specific integrases is has origins in bacterial phages and conjugate transposons. One member is the integrase from Bacillus subtilis conjugative transposon ICEBs1. ICEBs1 can be excised and transfered to various recipients in response to DNA damage or high concentrations of potential mating partners. The family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.76232e-44
NZ_CP053210.1\|WP_000163931.1\|16648_17218_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|223271	COG0193, Pth, Peptidyl-tRNA hydrolase [Translation, ribosomal structure and biogenesis].	1.08887e-98
NZ_CP053210.1\|WP_000892185.1\|24078_24621_+\|hypoxanthine-phosphoribosyltransferase	gnl\|CDD\|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	1.94444e-97
NZ_CP053210.1\|WP_001218707.1\|15462_16578_+\|redox-regulated-ATPase-YchF	gnl\|CDD\|236583	PRK09601, PRK09601, redox-regulated ATPase YchF.	0
NZ_CP053210.1\|WP_000041909.1\|21044_21413_+\|septum-formation-initiator-family-protein	gnl\|CDD\|225471	COG2919, COG2919, Septum formation initiator [Cell division and chromosome partitioning].	1.34216e-20
NZ_CP053210.1\|WP_001234978.1\|20785_21052_+\|RNA-binding-S4-domain-containing-protein	gnl\|CDD\|224109	COG1188, COG1188, Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis].	4.06015e-32
NZ_CP053210.1\|WP_001156571.1\|12010_12226_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	4.65008e-09
NZ_CP053210.1\|WP_000258104.1\|17218_20728_+\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0

>NZ_CP053210.1|WP_000369225.1|12392_13130_+|helix-turn-helix-domain-containing-protein
MDNLAQHVGEKIKFFRKENGWTQSVLAEKMSTSKQTISKYEKGIIKVNQDTIFKLADIFGVSIDSFFPSIIEEIATTSPIQSIYDQLTPPRQEKALTYLKKQLLEQKNENIVSENIISLDDYRESKTLPVIGVVTAGNGITQDDNLNMEKCFYTDEIPDDYDAIAYVVGNSMEPKIKNGDYLFIKNTPQVDYNTIGIFQVDGANYVKKLRQGYLESLNPECADIQLDEDNDIRTIGEVVSIYREK
>NZ_CP053210.1|WP_001156571.1|12010_12226_-|helix-turn-helix-transcriptional-regulator
MQEKLLILRKKQGISQQELADYLKISVTSYGQKERGEKAFTLDEMFALSTFFELSISEIFLPRKSPKKRHN
>NZ_CP053210.1|WP_001009512.1|11728_11914_-|hypothetical-protein
MNFKEFKTWLDDAVSVAEAMALPENKGVLDDLIENTANNLAFIAELVESRQLIYRKPRHED
>NZ_CP053210.1|WP_000393070.1|10816_11269_-|hypothetical-protein
MEETAYENLTRRIDRISAEMREIGEKTGLSRLSLLASQTKFIKEELSRLLWIELPELNDSHKIEAVSKSTTGIFFSPGIFEMDAMRKAFFKRQAKHFFDNEADQQAYIEHTEKEYLGATVTLKDILFNSKNGTQKANKSCLIEKFEEAMQ
>NZ_CP053210.1|WP_000171265.1|10619_10820_-|hypothetical-protein
MTLDLGKMTQAEFDKQMAEIKERNPNIFQLISDFLDRKVTPEEVDEFLKMERAEQVEYIKNYQARV
>NZ_CP053210.1|WP_001003748.1|10402_10618_-|hypothetical-protein
MNELDISNTQAAVLIVILIGLLLYLNHRDRKKSAQIERENQQTIKTPSEDLNPEYGRYIQLAGVNVWGGME
>NZ_CP053210.1|WP_000122652.1|10112_10406_-|hypothetical-protein
MSYTMNLYPDIEKIPDETYFTKEIFLATCLNNTIRIAVARGVLTSQLLDKETKEVVCKTLDTIIENQKAILQGVASGQITFLNKSKGEEELDESIRE
>NZ_CP053210.1|WP_000058847.1|9790_10132_-|hypothetical-protein
MSLSENDKRVLRLIKVGAENSITGSEISLTTKLTERTVRDIIKRLVVKHNIPIVGVRCGVFSGYFIPANKGELLDGAKAFYNQVQEESKRLAVLMNSDLESYKETLKEVGGYV
>NZ_CP053210.1|WP_000492128.1|9522_9798_-|hypothetical-protein
MFSLSRESEHDLTHGILEVVERYLEAREKVPPRLTKLINRVELKEELKISDNTLNKWESQGLRRYQPPDDGARIIFYLVDDIRRFMGVENG
>NZ_CP053210.1|WP_000158206.1|8522_9383_-|primase-C-terminal-domain-containing-protein
MTIYEARGFQSNLVYPFDKMEPFQYIERFKPLVVPESADPEEYKRTQAPYCLSGKVMPEKNGSYKRNNTSLIYRDLIFLDYDDIQGTTEDFIEAVSSALFGYSYILYPTIKHSIEKPRFRLVVKSNNVMNEATYKQVVKEIADKIGLPFDMASLTWSQLQGLPVTTGDPATYQKIVEHGLDYPVPKVEPRAKQGTTELYKPRASGQRSMTMRIIDTLFNGFGDEGGRNVALTRFVGLLFNKWVDCDLETAYELTKIANSVTVEPLPIEELDRTFSSIARAEYRKRG
>NZ_CP053210.1|WP_029745112.1|13645_13948_+|hypothetical-protein
MGTYTNLGTKALYLIATLPAEEKQAQIDRIEQGDNPTVRELQDLKLKFSAAKRKIMELQKGQEPTKEIVKEVPVIPADYQEALQNRQQLEERAKSAEERN
>NZ_CP053210.1|WP_000704695.1|14176_15343_+|site-specific-integrase
MKITEYTKKDGTTVYRSSVYLGIDTVTGKKVKTTISGRTKRELRNKALQAQIDFEKNGSTVFKAVQINTYAELVENWLETYCHTVKKSTLMGTKFKIDKYLLPAFGNYRLDKLTPPIIQKQVNQWAKDYNQLGKGFQEYPLLHSLNKRILKYAVSLQAIPFNPARDVIVPRRKEKEGQKLKYLDDDNLKKFLTYLEQLPNTYKNFFDTVLYKTLLATGLRIRECLALEWSDIDLKNGTLDVNKTLNIIKEITGPKTKSSVRMIDLDNKTVLMLRLYKARQSQIGKEMGLTYEKVFSNSFDKHIDARMLSFRLVKHLERAGCPRFTFHAFRHTHASILLNAGLPYKEIQTRLGHAKLSMTMDIYSHLSKDNQKNATSFYEKAIEKLKSS
>NZ_CP053210.1|WP_001218707.1|15462_16578_+|redox-regulated-ATPase-YchF
MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGMVEVPDERLQKLTEMITPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLANIREVDAIVHVVRAFDDENVMREQGREDAFVDPLADIDTINLELILADLESVNKRYARVEKMARTQKDKESVAEFNVLQKIKPVLEDGKSARTIEFTDEEQKVVKGLFLLTTKPVLYVANVDEDVVSEPDSIDYVKQIREFAATENAEVVVISARAEEEISELDDEDKKEFLEAIGLTESGVDKLTRAAYHLLGLGTYFTAGEKEVRAWTFKRGMKAPQAAGIIHSDFEKGFIRAVTMSYEDLVKYGSEKAVKEAGRLREEGKEYIVQDGDIMEFRFNV
>NZ_CP053210.1|WP_000163931.1|16648_17218_+|aminoacyl-tRNA-hydrolase
MTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSVDKVDDSVKYYLQEKNFEKTMQRYNG
>NZ_CP053210.1|WP_000258104.1|17218_20728_+|transcription-repair-coupling-factor
MVTLLDLFSENDQIKKWHQNLTDKKRQLILGLSTSTKALAIASSLEKEDRIVLLTSTYGEAEGLVSDLISILGEELVYPFLVDDAPMVEFLMSSQEKIISRVEALRFLTDSSKKGILVCNIAASRLILPSPNAFKDSIVKISVGEEYDQHAFIHQLKENGYRKVTQVQTQGEFSLRGDILDIFEISQLEPCRIEFFGDEIDGIRSFEVETQLSKENKTELTIFPASDMLLREKDYQRGQSALEKQISKTLSPILKSYLEEILSSFHQKQSHADSRKFLSLCYDKTWTVFDYIEKDTPIFFDDYQKLMNQYEVFERDLAQYFTEELQNSKAFSDMQYFSDIEQIYKKQSPVTFFSNLQKGLGNLKFDKIYQFNQYSMQEFFNQFSFLKEEIERYKKMDYTIILQSSNSMGSKTLEDMLEEYQIKLDSRDKTSICKESVNLIEGNLRHGFHFVDEKILLITEHEIFQKKLKRRFRRQHVSNAERLKDYNELEKGDYVVHHIHGIGQYLGIETIEIKGIHRDYVSVQYQNGDQISIPVEQIHLLSKYISSDGKAPKLNKLNDGHFKKAKQKVKNQVEDIADDLIKLYSERSQLKGFAFSADDDDQDAFDDAFPYVETDDQLRSIEEIKRDMQASQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKERFQNFAVNVDVLSRFRSKKEQTATLEKLKNGQVDILIGTHRVLSKDVVFADLGLMIIDEEQRFGVKHKETLKELKKQVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLEKNDSVIRDAVLREMERGGQVYYLYNKVDTIVQKVSELQELIPEASIGYVHGRMSEVQLENTLLDFIEGQYDILVTTTIIETGVDIPNANTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPEKSISEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNLLGKSQSGFIDSVGFELYSQLLEEAIAKRNGNANANTRTKGNAELILQIDAYLPDTYISDQRHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEIGLVKSYLDKVFVQRVERKDNKITIQFEKVTQRLFLAQDYFKALSVTNLKAGIAENKGLMELVFDVQNKKDYEILEGLLIFGESLLEIKESKEENSI
>NZ_CP053210.1|WP_001234978.1|20785_21052_+|RNA-binding-S4-domain-containing-protein
MRLDKYLKVSRIIKRRTVAKEVADKGRIKVNGILAKSSTDLKVNDQVEIRFGNKLLLVKVLEMKDSTKKEDAAGMYEIISETRVEENV
>NZ_CP053210.1|WP_000041909.1|21044_21413_+|septum-formation-initiator-family-protein
MSKNIVQLNNSFIQNEYQRRRYLMKERQKRNRFMGGVLILIMLLFILPTFNLAQSYQQLLQRRQQLADLQTQYQTLSDEKDKETAFATKLKDEDYAAKYTRAKYYYSKSREKVYTIPDLLQR
>NZ_CP053210.1|WP_001224760.1|21532_22801_+|serine-hydrolase
MRKFLIILLLPSFLTISKVVSTEKEVVYTSKEIYYLSQSDFGIYFREKLSSPMVYGEVPVYANEDLVVESGKLTPKTSFQITEWRLNKQGIPVFKLSNHQFIAADKRFLYDQSEVTPTIKKVWLESDFKLYNSPYDLKEVKSSLSAYSQVSIDKTMFVEGREFLHIDQAGWVAKESTSEEDNRMSKVQEMLSEKYQKDSFSIYVKQLTTGKEAGINQDEKMYAASVLKLSYLYYTQEKINEGLYQLDTTVKYVSAVNDFPGSYKPEGSGSLPKKEDNKEYSLKDLITKVSKESDNVAHNLLGYYISNQSDATFKSKMSAIMGDDWDPKEKLISSKMAGKFMEAIYNQNGFVLESLTKTDFDSQRIAKGVSVKVAHKIGDADEFKHDTGVVYADSPFILSIFTKNSDYDTISKIAKDVYEVLK
>NZ_CP053210.1|WP_001208993.1|22797_24075_+|tRNA-lysidine(34)-synthetase-TilS
MREPDFLNHFLKKGYFKKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEAELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETILMRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIRNSYLPKLEKENPRFRDAILGIGNEILDYDLAIAELSNNINVEDLQQLFSYSESTQRVLLQTYLNRFPDLNLTKAQFAEVQQILKSKSQYRHPIKNGYELIKEYQQFQICKISPQADEKEDELVLHYQNQVAYQGYLFSFGLPLEGELIQQIPVSRETSIHIRHRKTGDVLIQNGHRKKLRRLFIDLKIPMEKRNSALIIEQFGEIVSILGIATNNLSKKTKNDIMNTVLYIEKIDR
>NZ_CP053210.1|WP_000892185.1|24078_24621_+|hypoxanthine-phosphoribosyltransferase
MLENDIKKVLVSHDEITEAAKKLGAQLTKDYAGKNPILVGILKGSIPFMAELVKHIDTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIEADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVYSN

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Crispr_ID: NZ_CP053210_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_3

112880-112975

Orphan

Consensus_repeat	Method
AATGTGTAAGATTTTTATATATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053210_3

>merge|NZ_CP053210|3|112880-112975|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAATTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGAAATGTGTAAAATTTTTATATATAA

>NZ_CP053210|3|3|112880-112975|CRISPRCasFinder
AATGTGTAAGATTTTTATATATAA	TTTTTCTACACATACATTGTACATCTAAAAGAAAGCCCTGTCAAGAGA
AATGTGTAAAATTTTTATATATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_000838912.1\|119156_119828_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|224674
NZ_CP053210.1\|WP_000800407.1\|105986_107462_+\|DUF3502-domain-containing-protein	unknown	unknown	gnl\|CDD\|378792
NZ_CP053210.1\|WP_001189281.1\|120708_121029_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000273863.1\|112535_112862_-\|PadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224609
NZ_CP053210.1\|WP_000500040.1\|118275_119148_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|129801
NZ_CP053210.1\|WP_054362596.1\|114224_115382_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133016
NZ_CP053210.1\|WP_000808440.1\|109925_110990_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374284
NZ_CP053210.1\|WP_075218952.1\|121434_121731_+\|lactococcin-972-family-bacteriocin	unknown	unknown	gnl\|CDD\|370615
NZ_CP053210.1\|WP_001030029.1\|107733_108720_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|234663
NZ_CP053210.1\|WP_000744906.1\|113000_114167_-\|CynX/NimT-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP053210.1\|WP_001233691.1\|111051_111963_-\|DUF4097-domain-containing-protein	unknown	unknown	gnl\|CDD\|372574
NZ_CP053210.1\|WP_000836442.1\|120069_120657_+\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|212030
NZ_CP053210.1\|WP_000724257.1\|121782_123891_+\|bacteriocin-associated-integral-membrane-family-protein	unknown	unknown	gnl\|CDD\|273736
NZ_CP053210.1\|WP_000714582.1\|103862_104792_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP053210.1\|WP_001075102.1\|104805_105729_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP053210.1\|WP_001140354.1\|108994_109855_+\|DUF4299-domain-containing-protein	unknown	unknown	gnl\|CDD\|339103
NZ_CP053210.1\|WP_001809441.1\|103322_103544_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000200892.1\|117621_118254_-\|HAD-family-hydrolase	unknown	unknown	gnl\|CDD\|319798
NZ_CP053210.1\|WP_001035700.1\|115423_117274_+\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|224011
NZ_CP053210.1\|WP_000198691.1\|111955_112549_-\|DUF1700-domain-containing-protein	unknown	unknown	gnl\|CDD\|227053

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_000800407.1\|105986_107462_+\|DUF3502-domain-containing-protein	gnl\|CDD\|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	4.24398e-44
NZ_CP053210.1\|WP_000273863.1\|112535_112862_-\|PadR-family-transcriptional-regulator	gnl\|CDD\|224609	COG1695, COG1695, Predicted transcriptional regulators [Transcription].	8.86871e-19
NZ_CP053210.1\|WP_000500040.1\|118275_119148_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|129801	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit. This enzyme is also called serine deaminase. L-serine dehydratase converts serine into pyruvate in the gluconeogenesis pathway from serine. This model describes the alpha chain of an iron-sulfur-dependent L-serine dehydratase, found in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of alpha chains from the homologous region of single chain forms such as found in Escherichia coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	1.44295e-105
NZ_CP053210.1\|WP_054362596.1\|114224_115382_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	7.98967e-109
NZ_CP053210.1\|WP_000808440.1\|109925_110990_-\|hypothetical-protein	gnl\|CDD\|374284	pfam16001, DUF4775, Domain of unknown function (DUF4775). This family of proteins is functionally uncharacterized. This family of proteins is found in eukaryotes. Proteins in this family are typically between 308 and 484 amino acids in length.	0.000365448
NZ_CP053210.1\|WP_075218952.1\|121434_121731_+\|lactococcin-972-family-bacteriocin	gnl\|CDD\|370615	pfam09683, Lactococcin_972, Bacteriocin (Lactococcin_972). These sequences represent bacteriocins related to lactococcin. Members tend to be found in association with a seven transmembrane putative immunity protein.	2.49804e-22
NZ_CP053210.1\|WP_001030029.1\|107733_108720_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|234663	PRK00142, PRK00142, rhodanese-related sulfurtransferase.	0
NZ_CP053210.1\|WP_000744906.1\|113000_114167_-\|CynX/NimT-family-MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.79179e-126
NZ_CP053210.1\|WP_001233691.1\|111051_111963_-\|DUF4097-domain-containing-protein	gnl\|CDD\|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	1.41713e-39
NZ_CP053210.1\|WP_000836442.1\|120069_120657_+\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|212030	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.	5.22512e-13
NZ_CP053210.1\|WP_000724257.1\|121782_123891_+\|bacteriocin-associated-integral-membrane-family-protein	gnl\|CDD\|273736	TIGR01654, unnamed_protein_product, bacteriocin-associated integral membrane (putative immunity) protein. This model represents a family of integral membrane proteins, most of which are about 650 residues in size and predicted to span the membrane seven times. Nearly half of the members of this family are found in association with a member of the lactococcin 972 family of bacteriocins (TIGR01653). Others may be associated with uncharacterized proteins that may also act as bacteriocins. Although this protein is suggested to be an immunity protein, and the bacteriocin is suggested to be exported by a Sec-dependent process, the role of this protein is unclear. [Cellular processes, Toxin production and resistance].	0
NZ_CP053210.1\|WP_000714582.1\|103862_104792_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	3.01638e-143
NZ_CP053210.1\|WP_001075102.1\|104805_105729_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.04007e-69
NZ_CP053210.1\|WP_001140354.1\|108994_109855_+\|DUF4299-domain-containing-protein	gnl\|CDD\|339103	pfam14132, DUF4299, Domain of unknown function (DUF4299). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 275 and 313 amino acids in length. There are two conserved sequence motifs: RGF and DAY. There are two completely conserved residues (P and D) that may be functionally important.	7.58045e-121
NZ_CP053210.1\|WP_000838912.1\|119156_119828_-\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|224674	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism].	1.1908e-89
NZ_CP053210.1\|WP_000200892.1\|117621_118254_-\|HAD-family-hydrolase	gnl\|CDD\|319798	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065. 5'-nucleotidases dephosphorylate nucleoside 5'-monophosphates to nucleosides and inorganic phosphate. Purified Pseudomonas aeruginosa PA0065 displayed high activity toward 5'-UMP and 5'-IMP, significant activity against 5'-XMP and 5'-TMP, and low activity against 5'-CMP. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	4.4095e-97
NZ_CP053210.1\|WP_001035700.1\|115423_117274_+\|polysaccharide-biosynthesis-protein	gnl\|CDD\|224011	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism].	0
NZ_CP053210.1\|WP_000198691.1\|111955_112549_-\|DUF1700-domain-containing-protein	gnl\|CDD\|227053	COG4709, COG4709, Predicted membrane protein [Function unknown].	7.70935e-64

>NZ_CP053210.1|WP_000273863.1|112535_112862_-|PadR-family-transcriptional-regulator
MYFPTSSALIEFLILAVLEQGDSYGYEISQTIKLIANIKESTLYPILKKLEGNSFLTTYSREFQGRMRKYYSLTNGGIEQLLTLKDEWALYTDTINGIIEGSIRHDKN
>NZ_CP053210.1|WP_000198691.1|111955_112549_-|DUF1700-domain-containing-protein
MTRTEYLTQLELYLKKLPEADRIEAMDYFRELFDDAGVEGEEELIASLGTPKEAAHEVLSNLLDKKINEAPAQKNNRQILHIALLALLAAPIGIPLGIAILVTLFAILVAALTVILAFFAVSILGIIGGFLFLVESFTVLAQAKSAFILIFGSGLLAIGASSLVLLGISYVARFFGLLIVRLVQFVLKKGKRGNQHA
>NZ_CP053210.1|WP_001233691.1|111051_111963_-|DUF4097-domain-containing-protein
MRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSFDDQIHISYHPSLSAHHDFITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANRGQTTIINASLENATLNTNSYILRIEGSRIKNSKLTTPNIVNIFDTVLTDSQLESTDNHFHAENIQVHGKVELTAKDYLRIILDQKESQRINWDISSNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
>NZ_CP053210.1|WP_000808440.1|109925_110990_-|hypothetical-protein
MKQEWFESNDFVKTTSKNKPEEQAQEVADKAEETIADFDTPIGKNTQVEEEVSQAEVELESQQEEKIETPEVGEARTEIEEKKASNSTEEESDLSKETEKVTIAEESQEALPQQKATTKEPLLISKSLESPYIPDQAPKSRDKWKEQVLDFWSWLVEAIKSPTSKFETSITHSYTAFLLLILFSASSFFFSIYHIKHAYYGHIASINSRFPEQLAPLTLFSIISILVATTLFFFSFLLGSFVVRRFIHQEKDWTLDKVLQQYSQLLAIPIFLTAIASFFAFFDSLRFTALLCVISIGIILLASLHIITRPSQASETDSFYQLFLSVLVNGVIILLFFVAEVALIGDYLRILAFL
>NZ_CP053210.1|WP_001140354.1|108994_109855_+|DUF4299-domain-containing-protein
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIDLVQITGDGSKPEDYESIARLDYAKFLEVLPPSFYHQLDANQIEVQPILDKDFKTLAQEK
>NZ_CP053210.1|WP_001030029.1|107733_108720_+|rhodanese-related-sulfurtransferase
MAKDIRVLLYYLYTPIENAEQFAADHLAFCKSIGLKGRILVADEGINGTVSGDYETTQKYMDYVHSLPGMEDLWFKIDEESEQAFKKMFVRYKKEIVHLGLEDNDFDNDINPLETTGAYLSPKEFKEALLDKDTVVLDTRNDYEYDLGHFRGAIRPDIRNFRELPQWVRDNKEKFMDKRVVVYCTGGVRCEKFSGWMVREGYKDVGQLHGGIATYGKDPEVQGELWDGKMYVFDERIAVDVNHVNPTIVGKDWFDGTPCERYVNCGNPFCNRRILTSEENEDKYLRGCSHECRVHPRNRYVSKNELTQAEVIERLAAIGESLDQAATV
>NZ_CP053210.1|WP_000800407.1|105986_107462_+|DUF3502-domain-containing-protein
MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK
>NZ_CP053210.1|WP_001075102.1|104805_105729_+|carbohydrate-ABC-transporter-permease
MAKKKIKKEKIDNVGIHSFSKKADIFFSIISGLIALSCILPFVFVIIISVTDEKSLLQYGYSFFPSQFGLDGFEFLAQFKDKILQALFISVFVTVVGTLTNVFITTTYAYAISRTTFKYRRFFTIFVLLSMLFNAGLVPGYIMVTRVLQLGDTVWALIVPMLLSPFNIILMRSFFKKTIPEAILESARIDGASEARIFFQICLPLSLPGIATITLLTALGFWNDWFNALLYIKSDNLYPLQYLLMQIQQNMDYIAKAVGLTGQLGVALPKETGRMAMVVVATLPIAILYPFFQRYFVKGLTIGGVKE
>NZ_CP053210.1|WP_000714582.1|103862_104792_+|sugar-ABC-transporter-permease
MKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESLGLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
>NZ_CP053210.1|WP_001809441.1|103322_103544_+|hypothetical-protein
MSLQIKLKKLAKELSKLLKDSNLETVDKDVLENSQKELQKAVLFLADEKGSEHTEAEVIDNLKEVIAKLKANA
>NZ_CP053210.1|WP_000744906.1|113000_114167_-|CynX/NimT-family-MFS-transporter
MKKQSLFFVPGIILIGVSLRTPFTVLPIILGNISQGLEVEVSSLGVLTSLPLLMFTLFSPFSTRLAQKIGLEHLFTYSLFFLTIGSLIRLINLPLLYLGTLMVGASVAVINVLLPSLIQANQPKKIGFLTTLYVTSMGIATALASYLAVPITQASSWKGLILLLTLLCLATFLVWLPNHRYNHRLAPQTKQKSQIKVMRNKQVWAIIIFSGFQSLIFYTVMTWLPTMSIHAGLSSHEAGLLTSILSLISIPFSMTIPSLTTSLSTRNRQLMLTLVSLAGVVGISMLFFPINNFIYWLAIHLLIGTATSALFPYLMVNFSLKTSAPEKTAQLSGLSQTGGYILAAFGPTLFGYSFDLFHSWVPAVAALLLIDILMTVALFTVDRADKIL
>NZ_CP053210.1|WP_054362596.1|114224_115382_+|glycosyltransferase-family-2-protein
MSSKVSGFQDKNGKVWKIMIEWWKEKFRRVVVTQNVESLLVSIVISAYNEEKYLPGLIEDLKNQTYPKENIEILFINAMSTDGTTAIIQQFIKEDTEFNSIRLYNNPKKNQASGFNLGVKHSVGDLILKIDAHSKVTESFVMNNVAIIQQGEFVCGGPRPTIVEGKGKWAETLHLVEENMFGSSIANYRNSSEDRYVSSIFHGMYKREVFQKVGLVNEQLGRTEDNDIHYRIREHGYKIRYSPSILSYQYIRPTFKKMLHQKYLNGLWIGLTSHVQFKCLSLFHYVPCLFVLSLVFSLALLPITFVFITLLLGAYFLLLSLLTLLTLLKHKNGFLIVMPFLLFSIHFAYGFGTIVGLIRGFKWKKEYKRTIIYLDKISQINKNML
>NZ_CP053210.1|WP_001035700.1|115423_117274_+|polysaccharide-biosynthesis-protein
MNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQEIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQGIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPKEAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVKIYDLAKKMVLLSGHTESEIPIVEVGIRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLESINQKIGEFRTLSGDELKQAIIAFANQTTHIE
>NZ_CP053210.1|WP_000200892.1|117621_118254_-|HAD-family-hydrolase
MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSSSYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAYFQ
>NZ_CP053210.1|WP_000500040.1|118275_119148_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIKNEKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKLDLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGSASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLICDPVAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
>NZ_CP053210.1|WP_000838912.1|119156_119828_-|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MKSLRFQSVFDIIGPVMIGPSSSHTAGAVRIGKIVSSIFDDTPTEVEFQLFNSFAKTYRGHGTDLALVAGILGMDTDDPEIPNSLEIAHKRGIKIVWTIQKDSNAPHPNTTKITVKNAHKTISVTGISIGGGNIQVTELNGFAVSLNMNTPTIIIVHQDIPGMIALVTEALSRYGINIAQMNVTREKAGEKAIMIIEVDSRNCDEAIEEIRKIPHLHNVNFFK
>NZ_CP053210.1|WP_000836442.1|120069_120657_+|LysM-peptidoglycan-binding-domain-containing-protein
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVDQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>NZ_CP053210.1|WP_001189281.1|120708_121029_-|hypothetical-protein
MQRLEVYKNYQHLYDLRIAILLNLSTLYLYNQDKNMCKQICYTLLEDAKNKKSYDRLAICYVRIGICTDDSKLIQKGFSLLELTEETSMLSHLKKEVETYYQPKER
>NZ_CP053210.1|WP_075218952.1|121434_121731_+|lactococcin-972-family-bacteriocin
MIGEINHEKISVASLMVCSILASTSVLAVWVDGGQWNYGVGWSGNFGYSDYLHSTRSHTATVKDGNKFSKDRAEAEAWARASIFKFPPTGMEYFYGFE
>NZ_CP053210.1|WP_000724257.1|121782_123891_+|bacteriocin-associated-integral-membrane-family-protein
MKKISNFCMLLLLLCTTFFVFNVNYTREVVRIQEMGKTVDSLDLYLKDINEPAASVLRFFEDVSKEYKVSIIKTDSGDEVVKSGVFDKDTFPYQEFGISSLDFTTDGEGVYSNKEISNKLGTIPTFLKAKPIQLMTFQTYIKDTSRSLNGRYTITSTQEMDKDRIVQKWSDFFKIDQATLLEPTYKSAVEVINRDLLLSAIVFVLAILLLVLVTVYQPMMEMKRVGVQKLLGFQDRAVLADVVKGNLYLLLGGALVINLGVFFLLDYKPKDLFPMLWLSHFLLLQLYLFISWLTYLLIQKMTISSLLKGFSSFKFGLIFNYVMKIGTTILLTALLIGVGRSLEQENKELAYQQQWVSQGNYLTLETFKLNDNLWQEELAGSGKSTDYFYRFYQDLVEKTQAGYVQSSSLPVKNFVQSEQIQQYQLTDTVDVYYANRNFLKSKGFKLPDTGIKKVILMPASTKGEEDKNQLLGKLIAFHSMKYEEQQKRTIEEMDVEIAYYEGDWSFFPYSDKRKENLSNPIISLVNDSDMMWDEKASLSTTGLNNPIKIENTVQHQKEITELVEKLSDGNYLKFSSIQAIQQEKVDSYRDAVRNFNLLFALFGLLSMMISYFLLVTTFLLKRRDIITKKFMGWKLVDRYRPLLVLLLLGYSFPLLVLIFFAHAFLPLLLFAGFTCLDILFVLGLASRMEKRSLVELLKGGIL

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Crispr_ID: NZ_CP053210_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_4

790488-790561

Orphan

Consensus_repeat	Method
AAGAAAAGCTAAGCTCGAGAAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053210_4

>merge|NZ_CP053210|4|790488-790561|CRISPRCasFinder
AAGAAAAGCTAAGCTCGAGAAAGGGGCTCTTTGTCAACTGTAGTGGGTTGAAAAAAAGCTAAGCTCGAGAAAGG

>NZ_CP053210|4|4|790488-790561|CRISPRCasFinder
AAGAAAAGCTAAGCTCGAGAAAGG	GGCTCTTTGTCAACTGTAGTGGGTTG
AAAAAAAGCTAAGCTCGAGAAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_000219014.1\|784333_785356_+\|branched-chain-amino-acid-aminotransferase	unknown	unknown	gnl\|CDD\|237363
NZ_CP053210.1\|WP_000037279.1\|779369_781313_+\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|130130
NZ_CP053210.1\|WP_000196416.1\|795317_796580_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP053210.1\|WP_000797065.1\|798297_799710_+\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|131035
NZ_CP053210.1\|WP_000454809.1\|786168_786858_+\|DUF969-domain-containing-protein	unknown	unknown	gnl\|CDD\|226340
NZ_CP053210.1\|WP_000887715.1\|796590_797817_+\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|131034
NZ_CP053210.1\|WP_000699369.1\|787792_788437_+\|pyroglutamyl-peptidase-I	unknown	unknown	gnl\|CDD\|237299
NZ_CP053210.1\|WP_000037113.1\|788604_788835_+\|DUF2969-domain-containing-protein	unknown	unknown	gnl\|CDD\|371411
NZ_CP053210.1\|WP_000920158.1\|791995_792493_+\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|224867
NZ_CP053210.1\|WP_001001623.1\|789207_790410_+\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235851
NZ_CP053210.1\|WP_001820217.1\|781732_784204_+\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|273422
NZ_CP053210.1\|WP_000719158.1\|799940_801182_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP053210.1\|WP_000283777.1\|792492_794148_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NZ_CP053210.1\|WP_000137265.1\|786854_787778_+\|DUF979-domain-containing-protein	unknown	unknown	gnl\|CDD\|226338
NZ_CP053210.1\|WP_001041547.1\|794175_794370_+\|DUF3272-domain-containing-protein	unknown	unknown	gnl\|CDD\|314526
NZ_CP053210.1\|WP_000114489.1\|794519_795290_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP053210.1\|WP_000489841.1\|801284_802394_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|279875
NZ_CP053210.1\|WP_001850392.1\|785411_786104_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173869
NZ_CP053210.1\|WP_000628789.1\|778592_779234_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl\|CDD\|234691
NZ_CP053210.1\|WP_001218479.1\|797803_798235_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl\|CDD\|273918

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_000219014.1\|784333_785356_+\|branched-chain-amino-acid-aminotransferase	gnl\|CDD\|237363	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional.	0
NZ_CP053210.1\|WP_000037279.1\|779369_781313_+\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|130130	TIGR01058, DNA_topoisomerase_4_subunit_B, DNA topoisomerase IV, B subunit, Gram-positive. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation step of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP053210.1\|WP_000196416.1\|795317_796580_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	1.06957e-134
NZ_CP053210.1\|WP_000797065.1\|798297_799710_+\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|131035	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB. This protein, SufB, forms a cytosolic complex SufBCD. This complex enhances the cysteine desulfurase of SufSE. The system, together with SufA, is believed to act in iron-sulfur cluster formation during oxidative stress. Note that SufC belongs to the family of ABC transporter ATP binding proteins, so this protein, encoded by an adjacent gene, has often been annotated as a transporter component. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP053210.1\|WP_000454809.1\|786168_786858_+\|DUF969-domain-containing-protein	gnl\|CDD\|226340	COG3819, COG3819, Predicted membrane protein [Function unknown].	3.61205e-118
NZ_CP053210.1\|WP_000887715.1\|796590_797817_+\|cysteine-desulfurase	gnl\|CDD\|131034	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP053210.1\|WP_000699369.1\|787792_788437_+\|pyroglutamyl-peptidase-I	gnl\|CDD\|237299	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional.	9.43039e-140
NZ_CP053210.1\|WP_000037113.1\|788604_788835_+\|DUF2969-domain-containing-protein	gnl\|CDD\|371411	pfam11184, DUF2969, Protein of unknown function (DUF2969). This family of proteins with unknown function appears to be restricted to Lactobacillales.	1.70361e-20
NZ_CP053210.1\|WP_000920158.1\|791995_792493_+\|GAF-domain-containing-protein	gnl\|CDD\|224867	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms].	3.78882e-79
NZ_CP053210.1\|WP_001001623.1\|789207_790410_+\|30S-ribosomal-protein-S1	gnl\|CDD\|235851	PRK06676, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP053210.1\|WP_001820217.1\|781732_784204_+\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|273422	TIGR01061, DNA_topoisomerase_4_subunit_A, DNA topoisomerase IV, A subunit, Gram-positive. Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP053210.1\|WP_000719158.1\|799940_801182_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	5.40992e-113
NZ_CP053210.1\|WP_000283777.1\|792492_794148_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP053210.1\|WP_000137265.1\|786854_787778_+\|DUF979-domain-containing-protein	gnl\|CDD\|226338	COG3817, COG3817, Predicted membrane protein [Function unknown].	7.79886e-149
NZ_CP053210.1\|WP_001041547.1\|794175_794370_+\|DUF3272-domain-containing-protein	gnl\|CDD\|314526	pfam11676, DUF3272, Protein of unknown function (DUF3272). This family of proteins with unknown function appears to be restricted to Streptococcus.	1.00342e-22
NZ_CP053210.1\|WP_000114489.1\|794519_795290_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	5.11611e-147
NZ_CP053210.1\|WP_000489841.1\|801284_802394_+\|AI-2E-family-transporter	gnl\|CDD\|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	1.4152e-67
NZ_CP053210.1\|WP_001850392.1\|785411_786104_+\|hypothetical-protein	gnl\|CDD\|173869	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding component of an ATP-binding cassette (ABC)-type oligopeptide transport system comprised of 5 subunits. The transport system OppABCDEF contains two homologous integral membrane proteins OppB and OppF that form the translocation pore; two homologous nucleotide-binding domains OppD and OppF that drive the transport process through binding and hydrolysis of ATP; and the substrate-binding protein or receptor OppA that determines the substrate specificity of the transport system. The dipeptide (DppA) and oligopeptide (OppA) binding proteins differ in several ways. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	3.02081e-10
NZ_CP053210.1\|WP_000628789.1\|778592_779234_-\|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl\|CDD\|234691	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY.	9.41774e-73
NZ_CP053210.1\|WP_001218479.1\|797803_798235_+\|SUF-system-NifU-family-Fe-S-cluster-assembly-protein	gnl\|CDD\|273918	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family. Three iron-sulfur cluster assembly systems are known so far. ISC is broadly distributed while NIF tends to be associated with nitrogenase in nitrogen-fixing bacteria. The most recently described is SUF, believed to be important to maintain the function during aerobic stress of enzymes with labile Fe-S clusters. It is fairly widely distributed. This family represents one of two different proteins proposed to act as a scaffold on which the Fe-S cluster is built and from which it is transferred. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	3.2161e-71

>NZ_CP053210.1|WP_001001623.1|789207_790410_+|30S-ribosomal-protein-S1
MNEFEDLLNSVSQVETGDVVSAEVLTVDATQANVAISGTGVEGVLTLRELTNDRDADINDFVKVGEVLDVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVTVKGTRAVKGGLSVEFEGVRGFIPASMLDTRFVRNAERFVGQEFDTKIKEVNAKENRFILSRREVVEAATAAARAEVFGKLAVGDVVTGKVARITSFGAFIDLGGVDGLVHLTELSHERNVSPKSVVTVGEEIEVKILDLNEEEGRVSLSLKATVPGPWDGVEQKLAKGDVVEGTVKRLTDFGAFVEVLPGIDGLVHVSQISHKRIENPKEALKVGQEVQVKVLEVNADAERVSLSIKALEERPAQEEGQKEEKRAARPRRPRRQEKRDFELPETQTGFSMADLFGDIEL
>NZ_CP053210.1|WP_000037113.1|788604_788835_+|DUF2969-domain-containing-protein
MSKKDKKIEIQVADAKVNVGKDSFEGYTLTIGKKVIGEIAELDGQFAIIKNGNVDSFYKKLEKAVEILIENYNLAK
>NZ_CP053210.1|WP_000699369.1|787792_788437_+|pyroglutamyl-peptidase-I
MKILVTGFNPFGGEKINPALEAVKLLPSEINGAEVRWVEIPTVFYKSSEVLEAEILRYQPDAVLCIGQAGGRTGLTPERVAINQDDARIPDNEGNQPIDTPIRIDGASAYFSSLPIKAMVQAIKKQGLPAVVSNSAGTFVCNHLMYQALYLVDKKFPNMRAGFMHIPYMMEQVVNKPNTAGMSLCDIVRGIEVAIEAIVDYKDKDLQLVGGETH
>NZ_CP053210.1|WP_000137265.1|786854_787778_+|DUF979-domain-containing-protein
MTELAKQLLELTYIVIGCQFLHTAYCSYKDKTNPVRLGTSAFWTLLSITFIGGSYMPNMSIGIIVILLSLLTLFKQVRIGTLPSLDEMKANIESNRLKNKIFIPVMLMAILALVLAQMIPEFSKISISLAALFATISVLVITNSHPKSLLSENNRMTQQVSTSGIVPQLLGALGAIFTVAGVGDVISHLISGIVPSDSRFIGVLAYVLGMVLFTMIMGNAFAAFTVITAGVGVPFVFALGANPIVAGALAMTAGYCGTLLTPMAANFNALPAALMDMKDQNGVIKAQAGVALVMIVIHIFLMYFLAF
>NZ_CP053210.1|WP_000454809.1|786168_786858_+|DUF969-domain-containing-protein
MEWIRLIGIAIIVVGFILKFDTIATVVLAGLVTALVSGVSLVEFLEILGKEFSNQRVLTIFMVTLPLVGLSETFGLKQRSIDLIRKIKGLTVGNFYTVYFFIRELAGFFSIRLGGHPQFVRPLVQPMGEAAAESQLGRKLTEVEDETIKARAAANENFGNFFAQNTFVGAGGVLLIGGTLDQLGYESNYAGIASTSIIVAVITLIVVGIYNYLFDKKLISKKTRGGEQK
>NZ_CP053210.1|WP_001850392.1|785411_786104_+|hypothetical-protein
MVLSTSAILVACGKTDKEADAPTTFSYVYAVDPASLGYSIATRTSRTDVIDGLMENDKYGNVAPSQKDYDLNSTGWAPSYQDPASYLNIMDPKSGSAMKHLGITKGKDKDVVAKPGLDKYKKLLEDAVSETTDLEKRYEKYAKAQAWSTDSSLLMPTASSGGSPVVSNVVPFSKPYSQVGIKGEPYIFKGMKLQKDIVTTKEYNEVFKKWQKEKLESNSKYQKELEKYIK
>NZ_CP053210.1|WP_000219014.1|784333_785356_+|branched-chain-amino-acid-aminotransferase
MTVTIDWENLGFSYMKLPYRYLAHFKNGQWDQGELTEDATLHISESSPSLHYGQQAFEGLKAYRTKDGSVQLFRPDENAKRLQRTCDRLLMPQVPTDMFVEACKAVVRANEEYVPPYGIGGTLYLRPLLIGVGDIIGVKPAEEYIFTIFAMPVGNYFKGGLVPTNFLIQDEYDRAAPNGTGAAKVGGNYAASLLPGKMAKSRHFSDVIYLDPSTHTKIEEVGSANFFGITADNEFVTPLSPSILPSITKYSLLYLAEHRLGLTPIEGDVPIDNLDRFVEAGACGTAAVISPIGGIQHGDDFHVFYSETEVGPVTRKLYNELTGIQFGDIEAPEGWIVKVD
>NZ_CP053210.1|WP_001820217.1|781732_784204_+|DNA-topoisomerase-IV-subunit-A
MSNIQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLLVNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTEIEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQINYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSRFDKEKAEKRLHIVEGLIRVISILDEVIALIRASENKADAKENLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKKFATPRLSSLEDTAKAIEIDTASLIAEEDTYVSVTKAGYIKRTSPRSFAASTLEEIGKRDDDRLIFVQSAKTTQHLLMFTSLGNVIYRPIHELADIRWKDIGEHLSQTITNFETNEEILYVEVLDQFDDATTYFAATRLGQIKRVERKEFTPWRTYRSKSVKYAKLKDDTDQIVAVAPIKLDDVVLVSQNGYALRFNIEEVPVVGAKAAGVKAMNLKEDDVLQSGFICNTSSFYLLTQRGSLKRVSIEEILATSRAKRGLQVLRELKNKPHRVFLAGAVAEQGFVGDFFSTEVDVNDQTLLVQSNKGTIYESRLQDLNLSERTSNGSFISDTISDEEVFDAYLQEVVTEDK
>NZ_CP053210.1|WP_000037279.1|779369_781313_+|DNA-topoisomerase-IV-subunit-B
MSKKEININNYNDDAIQVLEGLDAVRKRPGMYIGSTDGAGLHHLVWEIVDNAVDEALSGFGDRIDVTINKDGSLTVQDHGRGMPTGMHAMGIPTVEVIFTILHAGGKFGQGGYKTSGGLHGVGSSVVNALSSWLEVEITRDGAVYKQRFENGGKPVTTLKKIGTAPKSKTGTKVTFMPDATIFSTTDFKYNTISERLNESAFLLKNVTLSLTDKRTDEAIEFHYENGVQDFVSYLNEDKEILTPVLYFEGENNGFQVEVALQYNDGFSDNILSFVNNVRTKDGGTHETGLKSAITKVMNDYARKTGLIKEKDKNLEGSDYREGLAAVLSILVPEEHLQFEGQTKDKLGSPLARPVVDGIVADKLTFFLMENGELASNLIRKAIKARDAREAARKARDESRNGKKNKKDKGLLSGKLTPAQSKNPAKNELYLVEGDSAGGSAKQGRDRKFQAILPLRGKVINTAKAKMADILKNEEINTMIYTIGAGVGADFSIEDANYDKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKGKGKKEEVAYAWTDGELEELRKQFGKGATLQRYKGLGEMNADQLWETTMNPETRTLIRVTIEDLARAERRVNVLMGDKVEPRRKWIEDNVKFTLEEATVF
>NZ_CP053210.1|WP_000628789.1|778592_779234_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MITIVLLILAYLLGSIPSGLWIGQVFFQINLREHGSGNTGTTNTFRILGKKAGMATFVIDFFKGTLATLLPIIFHLQGVSPLIFGLLAVIGHTFPIFAGFKGGKAVATSAGVIFGFAPIFCLYLAIIFFGALYLGSMISLSSVTASIAAVIGVLLFPLFGFILSNYDSLFIAIILALASLIIIRHKDNIARIKNKTENLVPWGLNLTHQDPKK
>NZ_CP053210.1|WP_000920158.1|791995_792493_+|GAF-domain-containing-protein
MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEEKS
>NZ_CP053210.1|WP_000283777.1|792492_794148_+|DNA-polymerase-III-subunit-gamma/tau
MYQALYRKYRSQNFSQLVGQEVVAKTLKQAVEQEKISHAYLFSGPRGTGKTSVAKIFAKAMNCPNQVGGEPCNNCYICQAVTDGSLEDVIEMDAASNNGVDEIREIRDKSTYAPSLARYKVYIIDEVHMLSTGAFNALLKTLEEPTQNVVFILATTELHKIPATILSRVQRFEFKSIKTQDIKEHIHYILEKENISSEPEAVEIIARRAEGGMRDALSILDQALSLTQGNELTTAISEEITGTISLPALDDYVASLSQQDVPKALSCLNLLFDNGKSMTRFVTDLLHYLRDLLIVQTGGENTHHSSVFVENLALPQKNLFEMIRLATVSLADIKSSLQPKIYAEMMTVRLAEIKSEPALSGAVENEIATLRQEVARLKQELSNVGAVPKQVAPAPSRPATGKTVYRVDRNKVQSILQEAVENPDLARQNLIRLQNAWGEVIESLGGPDKALLAGSQPVAANEHHAILAFESNFNAGQTMKRDNLNTMFGNILSQAAGFSPEILAISMEEWKEVRAAFSAKAKSSQTEKEVEESLIPEGFEFLADKVKVEED
>NZ_CP053210.1|WP_001041547.1|794175_794370_+|DUF3272-domain-containing-protein
MNKQQFIIMALFTAAETYFFNEAWMTGRYIMAAFWAILLFRNFRVSYVMGKIVDVIDQHFNRKD
>NZ_CP053210.1|WP_000114489.1|794519_795290_+|Fe-S-cluster-assembly-ATPase-SufC
MSVLEIKDLHVEIEGKEILKGVNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTKGEVLFDGVNILELEVDERARMGLFLAMQYPSEIPGITNAEFLRAAMNAGKEDDEKISVREFITKLDEKMELLNMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFALLDEIDSGLDIDALKVVSKGVNAMRGEGFGAMIITHYQRLLNYITPDVVHVMMEGRVVLSGGPELAARLEREGYAKLAEELGYDYKEEL
>NZ_CP053210.1|WP_000196416.1|795317_796580_+|Fe-S-cluster-assembly-protein-SufD
MTRENIKLFSEMHAEPSWLADLRQKAFDKIETLELPVIERVKFHRWNLGDGTITENEPSANVPDFTALDHHLKLVQVGTQTVFEQTPVELAEQGVVFTDFHSALEEIPELIEEFFMSSVKYDDDKLAAYHTAYFNSGAVLYIPDNVEITEPIEGIFYQDSDSNVPFNKHIMIIAGKNSKISYLERLESRGEGSDKVTANITVEVIARSGAQVKFAAIDRLGENVTAYISRRGKLGNDASIDWAIGVMNEGNVVADFDSDLIGNGSHADLKVVALSSGRQVQGIDTRVTNYGCNSIGNILQHGVILEKATLTFNGIGHIIKGAKGADAQQESRVLMLSDQARSDANPILLIDENDVTAGHAASIGQVDPEDMYYLMSRGLDKATAERLVVRGFLGSVIVEIPVKEVRDEMIATIEEKLSKR
>NZ_CP053210.1|WP_000887715.1|796590_797817_+|cysteine-desulfurase
MLDVEAIRKDFPILDQIVNDEPLVYLDNAATTQKPLVVLKAINSYYEQDNANVHRGVHTLAERATASYEAARETIRKFINAGSTKEVLFTRGTTTSLNWVARFAEEILAEGDQVLISVMEHHSNIIPWQEACRKTGAELVYVYLKDGALDMEDLRAKLTDKVKFVSLAHASNVLGVINPIKEITQLAHQVGAIMVVDGAQSTPHMKIDVQDLDLDFFAFSGHKMAGPTGIGVLYGKEKYLEQMSPVEFGGEMIDFVYEQFASWKELPWKFEAGTPNMAGAIGLATAVDYLEKIGMDAVEAHEQELIAYVYPKLQAIEGLTIYGSQDLAQRSGVIAFNLGDLHPHDLATALDYEGVAVRAGHHCAQPLLQYLEVPATARASFYIYNTKADCDKLVDALQKTKEFFNGTF
>NZ_CP053210.1|WP_001218479.1|797803_798235_+|SUF-system-NifU-family-Fe-S-cluster-assembly-protein
MALSKLDSLYMAVVADHSKNPHHQGKLEDAEQISLNNPTCGDVINLSVKFDAEDRLEDIAFLNSGCTISTASASMMTDAVLGKTKQEILELATIFSEMVQGQKDERQDQLGDAAFLSGVAKFPQRIKCATLAWNALKKTIENQ
>NZ_CP053210.1|WP_000797065.1|798297_799710_+|Fe-S-cluster-assembly-protein-SufB
MAEERVEPKPIDLGEYKFGFHDDVEPVLSTGKGLNEGVIRELSAAKGEPEWMLEFRLKSYETFKKMPMQTWGADLSEIDFDDLIYYQKPSDKPARSWDDVPEKIKETFERIGIPEAERAYLAGASAQYESEVVYHNMKEEFQKLGIIFTDTDSALKEYPDLFKQYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENIGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQNWSDNVYNLVTKRAKAQKDATVEWIDGNLGAKTTMKYPSVYLDGEGARGTMLSIAFANAGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKNSKKSVSHIECDTIIMDDLSASDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSESEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG
>NZ_CP053210.1|WP_000719158.1|799940_801182_-|D-alanyl-D-alanine-carboxypeptidase
MKKIFLTLLTVSLLGGASTAVAQDFTIAAKHAIAVEANTGKILYEKDATQPVEIASITKLITVYLVYEALENGSITLSTPVDISDYPYQLTTNSEASNIPMEARNYTVEELLEATLVSSANSAAIALAEKIAGSEKDFVDMMRAKLLEWGIQDATVVNTTGLNNETLGDNIYPGSKKDEENKLSAYDVAIVARNLIKKYPQVLEITKKPSSTFAGMTITSTNYMLEGMPAYRGGFDGLKTGTTDKAGESFVGTTVEKGMRVITVVLNADHQDNNPYARFTATSSLMDYISSTFTLRKIVQQGDAYQDSKAPVQDGKEDTVTAVAPEDIYLIERVGNQSSQSVQFTPDSKAIPAPLEAGTVVGHLTYEDKDLIGQGYITTERPSFEMVADKKIEKAFFLKVWWNQFVRFVNEKL
>NZ_CP053210.1|WP_000489841.1|801284_802394_+|AI-2E-family-transporter
MFRRNKLFFWTTEILLLTIIFYLWRQMGSLINPFVSVLNTIMIPFLLGGFLYYLTNPIVTFLNKVCKLNRLLGILITLCTLVWGMVIGVVYLLPILINQLSSLIISSQTIYSRVQDLIIDLSNYPALQNLDVEATIQQLNLSYVDILQNILNSVSNSVGSVLSALISTVLILIMTPVFLVYFLLDGHKFLPMLERTILKRDRLHIAGLLKNLNATIARYISGVSIDAIIIGCLAYIGYSIIGLKYALVFAIFSGVANLIPYVGPSIGLIPMIIANIFTDPHRLLIAVIYMLVVQQVDGNILYPRIVGSVMKVHPITILVLLLLSSNIYGVVGMIVAVPTYSILKEISKFLSRLYENHKIMKERERELAK

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Crispr_ID: NZ_CP053210_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_5

1211958-1212029

Orphan

Consensus_repeat	Method
ATTTACAAAATCAACCTCGCTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053210_5

>merge|NZ_CP053210|5|1211958-1212029|CRISPRCasFinder
ATTTACAAAATCAACCTCGCTCTCTTATTTTTAGGCTCGGGAAAAAATGATTTACAAAATCAGCCTCGCTCT

>NZ_CP053210|5|5|1211958-1212029|CRISPRCasFinder
ATTTACAAAATCAACCTCGCTCT	CTTATTTTTAGGCTCGGGAAAAAATG
ATTTACAAAATCAGCCTCGCTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_000895736.1\|1209670_1210570_-\|zinc-metalloprotease-HtpX	unknown	unknown	gnl\|CDD\|235318
NZ_CP053210.1\|WP_000219823.1\|1210571_1211132_-\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP053210.1\|WP_001068669.1\|1218465_1218813_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP053210.1\|WP_000237420.1\|1218931_1219261_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|172717
NZ_CP053210.1\|WP_000558899.1\|1207962_1209522_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP053210.1\|WP_000863628.1\|1213719_1215291_-\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_CP053210.1\|WP_025171066.1\|1212241_1213525_+\|uracil-permease	unknown	unknown	gnl\|CDD\|236744
NZ_CP053210.1\|WP_000166701.1\|1203262_1204342_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|237139
NZ_CP053210.1\|WP_000801941.1\|1211225_1211939_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|234637
NZ_CP053210.1\|WP_001003499.1\|1216174_1217479_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224004
NZ_CP053210.1\|WP_000389600.1\|1207406_1207724_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000402066.1\|1215302_1215635_-\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_CP053210.1\|WP_000023508.1\|1217491_1218298_+\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|182509
NZ_CP053210.1\|WP_000773239.1\|1206694_1207237_-\|DUF177-domain-containing-protein	unknown	unknown	gnl\|CDD\|224317
NZ_CP053210.1\|WP_000850024.1\|1205333_1205855_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	unknown	unknown	gnl\|CDD\|235365
NZ_CP053210.1\|WP_000244451.1\|1206065_1206695_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP053210.1\|WP_000712093.1\|1219254_1219629_-\|fluoride-efflux-transporter-CrcB	unknown	unknown	gnl\|CDD\|184575
NZ_CP053210.1\|WP_000701643.1\|1215725_1216103_-\|DUF1934-domain-containing-protein	unknown	unknown	gnl\|CDD\|378129
NZ_CP053210.1\|WP_000362440.1\|1219625_1219892_-\|chorismate-mutase	unknown	unknown	gnl\|CDD\|168880
NZ_CP053210.1\|WP_001293836.1\|1204391_1205315_-\|aspartate-carbamoyltransferase-catalytic-subunit	unknown	unknown	gnl\|CDD\|234849

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_000895736.1\|1209670_1210570_-\|zinc-metalloprotease-HtpX	gnl\|CDD\|235318	PRK04897, PRK04897, heat shock protein HtpX; Provisional.	0
NZ_CP053210.1\|WP_000219823.1\|1210571_1211132_-\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	9.04098e-87
NZ_CP053210.1\|WP_001068669.1\|1218465_1218813_-\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.91316e-70
NZ_CP053210.1\|WP_000558899.1\|1207962_1209522_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	6.24231e-106
NZ_CP053210.1\|WP_000863628.1\|1213719_1215291_-\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_CP053210.1\|WP_025171066.1\|1212241_1213525_+\|uracil-permease	gnl\|CDD\|236744	PRK10720, PRK10720, uracil transporter; Provisional.	9.55536e-121
NZ_CP053210.1\|WP_000166701.1\|1203262_1204342_-\|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit	gnl\|CDD\|237139	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit.	0
NZ_CP053210.1\|WP_000801941.1\|1211225_1211939_+\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	3.26486e-86
NZ_CP053210.1\|WP_001003499.1\|1216174_1217479_+\|HD-domain-containing-protein	gnl\|CDD\|224004	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only].	3.39624e-172
NZ_CP053210.1\|WP_000237420.1\|1218931_1219261_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|172717	PRK14229, PRK14229, fluoride efflux transporter CrcB.	1.27902e-53
NZ_CP053210.1\|WP_000402066.1\|1215302_1215635_-\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	3.28232e-50
NZ_CP053210.1\|WP_000023508.1\|1217491_1218298_+\|sugar-phosphatase	gnl\|CDD\|182509	PRK10513, PRK10513, sugar phosphate phosphatase; Provisional.	1.19828e-119
NZ_CP053210.1\|WP_000773239.1\|1206694_1207237_-\|DUF177-domain-containing-protein	gnl\|CDD\|224317	COG1399, COG1399, Predicted metal-binding, possibly nucleic acid-binding protein [General function prediction only].	2.00684e-42
NZ_CP053210.1\|WP_000850024.1\|1205333_1205855_-\|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR	gnl\|CDD\|235365	PRK05205, PRK05205, bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR.	1.21354e-86
NZ_CP053210.1\|WP_000244451.1\|1206065_1206695_-\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	2.52203e-105
NZ_CP053210.1\|WP_000712093.1\|1219254_1219629_-\|fluoride-efflux-transporter-CrcB	gnl\|CDD\|184575	PRK14221, PRK14221, fluoride efflux transporter CrcB.	6.60977e-62
NZ_CP053210.1\|WP_000701643.1\|1215725_1216103_-\|DUF1934-domain-containing-protein	gnl\|CDD\|378129	pfam09148, DUF1934, Domain of unknown function (DUF1934). Members of this family are found in a set of hypothetical bacterial proteins. Their precise function has not, as yet, been defined.	1.76219e-18
NZ_CP053210.1\|WP_000362440.1\|1219625_1219892_-\|chorismate-mutase	gnl\|CDD\|168880	PRK07248, PRK07248, chorismate mutase.	1.16629e-39
NZ_CP053210.1\|WP_001293836.1\|1204391_1205315_-\|aspartate-carbamoyltransferase-catalytic-subunit	gnl\|CDD\|234849	PRK00856, pyrB, aspartate carbamoyltransferase catalytic subunit.	2.49318e-163

>NZ_CP053210.1|WP_000801941.1|1211225_1211939_+|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MKPETFYNLLAEQNLPLSNQQKEQFERYFELLVEWNEKINLTAITDKEEVYLKHFYDSIAPILQGLIPNETIKLLDIGAGAGFPSLPMKILYPELDVTIIDSLNKRINFLQLLAQELDLNGVHFYHGRAEDFAQDKNFRAQYDFVTARAVARMQVLSELTIPYLKVGGKLLALKASNAPEELLEAKNALNLLFSKVEDNLSYALPNRDPRYITVVEKKKETPNKYPRKAGMPNKRPL
>NZ_CP053210.1|WP_000219823.1|1210571_1211132_-|LemA-family-protein
MTWIILGVIALIVIFVIVSYNGLVKNRMQTKEAWSQIDVQLKRRNDLLPNLIETVKGYAKYEGSTLEKVAELRNQVAAATSPAEAMKASDALTRQVSGIFAVAESYPDLKASANFVKLQEELTNTENKISYSRQLYNSVVSNYNVKLETFPSNIIAGMFGFKAADFLQTPEEEKSVPKVDFSGLGD
>NZ_CP053210.1|WP_000895736.1|1209670_1210570_-|zinc-metalloprotease-HtpX
MLFDQIASNKRKTWILLLVFFLLLALVGYAVGYLFIRSGLGGLVIALIIGFIYALSMIFQSTEIVMSMNGAREVDEQTAPDLYHVVEDMALVAQIPMPRVFIIDDPALNAFATGSNPQNAAVAATSGLLAIMNREELEAVMGHEVSHIRNYDIRISTIAVALVSAITMLSGMAGRMMWWGGAGRRRSDDDRDGNGLEIIMLVVSLLAIVLAPLAATLVQLAISRQREFLADASSVELTRNPQGMINALDKLDNSKPMSRHVDDASSALYINDPKKGGGFQKLFYTHPPISERIERLKQM
>NZ_CP053210.1|WP_000558899.1|1207962_1209522_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MHYEHSRKGNHMIKINHLTITQNKDLRDLVSDLTMTIQDGEKVAIIGEEGNGKSTLLKILMGEALSDFTIKGNIQSDYQSLAYIPQKLPEELKKKTLHDYFFLDSIDLDYSILYRLAEELHFDSNRFASDQEIGNLSGGEALKIQLIHELAKPFEILFLDEPSNDLDLETVDWLKGQIQKTRQTVIFISHDEDFLSETADTIVHLRLVKHRKEAETLVEHLDYDSYSEQRKANFAKQSQQAANNQRAYDKTMEKHRRVKQNVETTLRATKDSTAGRLLSKKMKTVLSQEKRYEKAAQSMTQKPLEEEQIQLFFSDIQPLPASKVLVQLEKENLSIDDRVLAQELQLTVRGQEKIGIIGPNGIGKSTLLAKLQQLLNDKREISLGFMPQDYHKKLQLDLSSIAYISKTGEKEELQKIQSHLASLNFSYPEMQHQIRSLSGGQQGKLLLLDLVLRKPNFLLLDEPTRNFSPTSQPQIRKLFATYPGGLITVSHDRRFLKEVCSIIYRMTEHGLKLVNLEDL
>NZ_CP053210.1|WP_000389600.1|1207406_1207724_+|hypothetical-protein
MEDKKLIQLLSKLNKSYQNCKQGTADDIRLQELLNTTMQELKKTEKLNNSILIDLEKFYQPTSPLIGLGSLKLNNQARTAWRNYDKFHYEHVKHVLSLYGPVFEF
>NZ_CP053210.1|WP_000773239.1|1206694_1207237_-|DUF177-domain-containing-protein
MKLNIQEIRKQSEGLNFEQTLDLVGDLRARNQEILDVKDILAVGKVQYEDRMYFLDYQLSYTIVLASSRSMEPVELVESYPVTEVFMEGATNQLDQEVLDDDLVLPIENGELDLAESVSDNILLNIPIKVLTAEEEAGQGFISGNDWQIMTEEEYQAQKAVKKEENSPFAGLQGLFDGDE
>NZ_CP053210.1|WP_000244451.1|1206065_1206695_-|endonuclease-III
MVLSKKRARKVLEEIIALFPDAKPSLDFTNHFELLVAVMLSAQTTDAAVNKATPGLFVAFPTPQAMSVATESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDILPPEQWLAAHQAMIYFGRAICHPKNPECDQYPQLYDFSNL
>NZ_CP053210.1|WP_000850024.1|1205333_1205855_-|bifunctional-pyr-operon-transcriptional-regulator/uracil-phosphoribosyltransferase-PyrR
MKTKEVVDELTVKRAITRITYEIIERNKDLNKIVLAGIKTRGVFIAHRIQERLKQLENLSVPVVELDTKPFRDDVKSGEDTSLVSVDVTDREVILVDDVLYTGRTIRAAIDNIVGHGRPARVSLAVLVDRGHRELPIRPDYVGKNIPTSRSEEIIVEMTELDDQDRVLITEEA
>NZ_CP053210.1|WP_001293836.1|1204391_1205315_-|aspartate-carbamoyltransferase-catalytic-subunit
MSENQQALNHVVSMEDLTVDQVMKLIKRGIEFKNGAQLPYEDHPIVSNLFFEDSTRTHKSFEVAEIKLGLERLDFDVKTSSVNKGETLYDTILTLSALGVDVCVIRHPEVDYYRELIASPTITTSIINGGDGSGQHPSQSLLDLMTIYEEFGHFEGLKVAIAGDLDHSRVAKSNMQILKRLGAELFFAGPEEWRSQEFADYGKFVTIDEIIDQVDVMMFLRVQHERHDSGAVFSKEDYHAQHGLTQERYDRLKETAILMHPAPINRDVEIADHLVEAPKSRIVQQMTNGVFVRMAILESVLASRNAN
>NZ_CP053210.1|WP_000166701.1|1203262_1204342_-|glutamine-hydrolyzing-carbamoyl-phosphate-synthase-small-subunit
MTKRILVLEDGTVFEGKAFGADIDVTGEIVFNTGMTGYQESITDQSYNGQILTFTYPLVGNYGINRDDYESIIPTCKGVVVFEEARRASNWRNQMTLDEFLKAKKIPGISGIDTRALTKIIRKHGTMRATLTHVGDSMDHVTDQLQATVLPTDNIKQVSTKTSYPAPGVGLSVVLVDFGLKHSILRELSKRNCNVTVVPYSTTAEEILHLNPDGVMLSNGPGNPEDVPQALDMIRGVQGKIPIFGICMGHQLFAMANGAKTYKMKFGHRGFNHAVREIATGRVDFTSQNHGYAVSREDLPEHLIITHEEINDKSVEGVRHRYQPAFSVQYHPDAAPGPHDASYLFDEFIEMMEVFKQSN
>NZ_CP053210.1|WP_025171066.1|1212241_1213525_+|uracil-permease
MKQESTVDLLLDVDQRPSAGKGILLSFQHVFAMFGATILVPLILGMPVSVALFASGVGTLIYMIATGFKVPVYLGSSFAFITAMSLAMKEMGGDVSAAQTGVILTGLVYVLVATSIRFVGTKWIDKLLPPIIIGPMIIVIGLGLAGSAVTNAGLVADGNWKNALVAIVTFLIAAFINTKGKGFLRIIPFLFAIIGGYLFALTLGLVDFTPVLKANWFEIPGFYLPFSTGGAFKEYNLYFGPEAIAILPIAIVTISEHIGDHTVLGQICGRQFLKEPGLHRTLLGDGIATSVSAFLGGPANTTYGENTGVIGMTRIASVSVIRNAAFIAIALSFLGKFTALISTIPNAVLGGMSILLYGVIASNGLKVLIKERVDFAQMRNLIIASAMLVLGLGGAILKLGPVTLSGTALSAMTGIILNLILPYENKD
>NZ_CP053210.1|WP_000863628.1|1213719_1215291_-|signal-recognition-particle-protein
MAFESLTERLQNVFKNLRKKGKISESDVQEATKEIRLALLEADVALPVVKDFIKKVRERAVGHEVIDTLNPAQQIIKIVDEELTAVLGSDTAEIIKSPKIPTIIMMVGLQGAGKTTFAGKLANKLKKEENARPLMIAADIYRPAAIDQLKTLGQQIDVPVFALGTEVPAVEIVRQGLEQAQTNHNDYVLIDTAGRLQIDELLMNELRDVKALAQPNEILLVVDAMIGQEAANVAREFNAQLEVTGVILTKIDGDTRGGAALSVRHITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDMLTLIEKASQEYDEQKALEMAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMIPGMANNPALQNMKVDERQIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVEVNKFIKDFNQAKQLMQGVMSGDMNKMMKQMGINPNNLPKNMPNMGGMDMSALEGMMGQGGMPDLSALGGAGMPDMSQMFGGGLKGKIGEFAMKQSMKRMANKMKKAKKKRK
>NZ_CP053210.1|WP_000402066.1|1215302_1215635_-|putative-DNA-binding-protein
MEIEKTNRMNALFEFYAALLTDKQMNYIELYYADDYSLAEIAEEFGVSRQAVYDNIKRTEKILEDYEMKLHMYSDYIVRSQIFDQILERYPKDDFLQEQIEILTSIDNRE
>NZ_CP053210.1|WP_000701643.1|1215725_1216103_-|DUF1934-domain-containing-protein
MKIQMRNTIQFDEQLEVIDQLYDVEVHEKGDYSYLLFYNEEKEKVVIKFHGQELVMSRFSNPKTIMRFLKDSDSLAYIPTPMGMQEFIIQTSHYQVDRQKIELDYQLQNQEGHPFASYQLEITWG
>NZ_CP053210.1|WP_001003499.1|1216174_1217479_+|HD-domain-containing-protein
MNEKVFRDPVHNYIHVNNQIIYDLINTKEFQRLRRIKQLGTSSYTFHGGEHSRFSHCLGVYEIARRITEIFEEKYPEEWNPAESLLTMTAALLHDLGHGAYSHTFENLFDTDHEAITQEIIQNPETEIHQVLLQVAPDFPEKVASVIDHTYPNKQVVQLISSQIDADRMDYLLRDSYFTGASYGEFDLTRILRVIRPIENGIAFQRNGMHAIEDYVLSRYQMYMQVYFHPATRAMEVLLQNLLKRAKELYPEDKDFFARTSPHLLPFFEKNVTLTDYLALDDGVMNTYFQLWMTSPDKILADLSHRFVNRKVFKSITFSQEDQDQLTSMRKLVEDIGFDPDYYTAIHKNFDLPYDIYRPESENPRTQIEILQKNGELAELSSLSPIVQSLAGSRHGDNRFYFPKEMLDQNSIFASITQQFLHLIENDHFTPNKN
>NZ_CP053210.1|WP_000023508.1|1217491_1218298_+|sugar-phosphatase
MSIKLIAVDIDGTLVNSQKEITPEVFSAIQDAKEAGVKVVIATGRPIAGVAKLLDDLQLRDEGDYVVTFNGALVQETATGHEIISESLTYEDYLDMEFLSRKLGVHMHAITKDGIYTANRNIGKYTVHESTLVSMPIFYRTPEEMAGKEIVKCMFIDEPEILDAAIEKIPAEFYERYSINKSAPFYLELLTKNVDKGSAITHLAEKLGLTKDETMAIGDEENDRAMLEVVGNPVVMENGNPEIKKIAKYITKTNDESGVAHAIRTWVL
>NZ_CP053210.1|WP_001068669.1|1218465_1218813_-|50S-ribosomal-protein-L19
MNPLIQSLTEGQLRTDIPSFRPGDTVRVHAKVVEGNRERIQIFEGVVIARKGAGISENYTVRKISNGVGVERIFPIHTPRVEKIEVVRYGKVRRAKLYYLRALQGKAARIKEIRR
>NZ_CP053210.1|WP_000237420.1|1218931_1219261_-|fluoride-efflux-transporter-CrcB
MVIVYLAITCGFGALVRYFFSRYNQASKLPLGTLIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRLLSDKKVFYSYLILTYLGGLVAIFLGILL
>NZ_CP053210.1|WP_000712093.1|1219254_1219629_-|fluoride-efflux-transporter-CrcB
MKKEQFYPLGIFLAAMLGGLVRYLVSTWLPASPDFPWGTLFVNYLGIFCLIFLVKGYLVYKGTSKGLILALGTGFCGGLTTFSSLMLDTVKLLDTGRYFSLVLYLLLSIGGGLLLAYFLGRKKW
>NZ_CP053210.1|WP_000362440.1|1219625_1219892_-|chorismate-mutase
MDLDIIRQEIDQIDDQIVKLLEERMHLVEGVVAYKKASGKPILDTKREEVIFEKVRSRVEDKRYQETIVATFSDILKRSRDYQDQNIK

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Crispr_ID: NZ_CP053210_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053210_6

1427959-1428095

Orphan

Consensus_repeat	Method
ACTTCTGGTGTCGGTACATTTGGTGTTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053210_6

>merge|NZ_CP053210|6|1427959-1428095|CRISPRCasFinder
ACTGGTTTAACCGGTACTTCTGGTGTTGGAACAGCTGGAGTTGGTTGTACTGGCACTTCTGGTGTCGGTACATTTGGTGTTGGTTGCGCTGGCACAGGTTTAACCGGTACTTCTGGTGTCGGCACATTTGGTGTTGG

>NZ_CP053210|6|6|1427959-1428095|CRISPRCasFinder
ACTGGTTTAACCGGTACTTCTGGTGTTGG	AACAGCTGGAGTTGGTTGTACTGGC
ACTTCTGGTGTCGGTACATTTGGTGTTGG	TTGCGCTGGCACAGGTTTAACCGGT
ACTTCTGGTGTCGGCACATTTGGTGTTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053210.1\|WP_001245197.1\|1434720_1436205_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|285470
NZ_CP053210.1\|WP_000697775.1\|1436255_1436984_-\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_CP053210.1\|WP_001277403.1\|1439526_1440318_-\|glutathione-dependent-disulfide-bond-oxidoreductase	unknown	unknown	gnl\|CDD\|183298
NZ_CP053210.1\|WP_000339024.1\|1420364_1421765_-\|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_CP053210.1\|WP_000412224.1\|1439000_1439411_-\|peptide-deformylase	unknown	unknown	gnl\|CDD\|181704
NZ_CP053210.1\|WP_000609607.1\|1422330_1422801_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|180915
NZ_CP053210.1\|WP_000747254.1\|1426159_1426648_-\|DUF5590-domain-containg-protein	unknown	unknown	gnl\|CDD\|227656
NZ_CP053210.1\|WP_000032465.1\|1440330_1443027_-\|cation-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319781
NZ_CP053210.1\|WP_000508269.1\|1437062_1437227_-\|YczI-family-protein	unknown	unknown	gnl\|CDD\|315732
NZ_CP053210.1\|WP_000068664.1\|1422059_1422299_-\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997
NZ_CP053210.1\|WP_000689597.1\|1420003_1420363_-\|S1-RNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|180908
NZ_CP053210.1\|WP_001151785.1\|1422812_1423103_-\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_CP053210.1\|WP_000565234.1\|1424617_1424983_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319923
NZ_CP053210.1\|WP_001279158.1\|1444657_1446529_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP053210.1\|WP_162489616.1\|1423255_1424602_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176
NZ_CP053210.1\|WP_000039618.1\|1426968_1427517_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223508
NZ_CP053210.1\|WP_000822876.1\|1437393_1438989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053210.1\|WP_000777787.1\|1424975_1426163_-\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|235596
NZ_CP053210.1\|WP_001138818.1\|1446525_1447710_-\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|237339
NZ_CP053210.1\|WP_000813910.1\|1443330_1444515_+\|CDF-family-manganese-efflux-transporter-MntE	unknown	unknown	gnl\|CDD\|223131

Protein	Function_ID	Function_description	E-value
NZ_CP053210.1\|WP_001245197.1\|1434720_1436205_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|285470	pfam08270, PRD_Mga, M protein trans-acting positive regulator (MGA) PRD domain. Mga is a DNA-binding protein that activates the expression of several important virulence genes in group A streptococcus in response to changing environmental conditions. This corresponds to the PRD like region.	1.6358e-76
NZ_CP053210.1\|WP_000697775.1\|1436255_1436984_-\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	5.15942e-96
NZ_CP053210.1\|WP_001277403.1\|1439526_1440318_-\|glutathione-dependent-disulfide-bond-oxidoreductase	gnl\|CDD\|183298	PRK11752, PRK11752, putative S-transferase; Provisional.	0
NZ_CP053210.1\|WP_000339024.1\|1420364_1421765_-\|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	4.47126e-62
NZ_CP053210.1\|WP_000412224.1\|1439000_1439411_-\|peptide-deformylase	gnl\|CDD\|181704	PRK09218, PRK09218, peptide deformylase; Validated.	7.64356e-90
NZ_CP053210.1\|WP_000609607.1\|1422330_1422801_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|180915	PRK07275, PRK07275, single-stranded DNA-binding protein; Provisional.	1.66017e-101
NZ_CP053210.1\|WP_000747254.1\|1426159_1426648_-\|DUF5590-domain-containg-protein	gnl\|CDD\|227656	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown].	4.01781e-59
NZ_CP053210.1\|WP_000032465.1\|1440330_1443027_-\|cation-translocating-P-type-ATPase	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP053210.1\|WP_000508269.1\|1437062_1437227_-\|YczI-family-protein	gnl\|CDD\|315732	pfam13129, DUF3953, Protein of unknown function (DUF3953). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 47 and 76 amino acids in length.	0.000993842
NZ_CP053210.1\|WP_000068664.1\|1422059_1422299_-\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	3.32721e-37
NZ_CP053210.1\|WP_000689597.1\|1420003_1420363_-\|S1-RNA-binding-domain-containing-protein	gnl\|CDD\|180908	PRK07252, PRK07252, S1 RNA-binding domain-containing protein.	1.34296e-78
NZ_CP053210.1\|WP_001151785.1\|1422812_1423103_-\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	1.40041e-37
NZ_CP053210.1\|WP_000565234.1\|1424617_1424983_-\|VOC-family-protein	gnl\|CDD\|319923	cd07262, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.50398e-31
NZ_CP053210.1\|WP_001279158.1\|1444657_1446529_-\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP053210.1\|WP_162489616.1\|1423255_1424602_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_CP053210.1\|WP_000039618.1\|1426968_1427517_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|223508	COG0431, COG0431, Predicted flavoprotein [General function prediction only].	1.06789e-32
NZ_CP053210.1\|WP_000777787.1\|1424975_1426163_-\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|235596	PRK05764, PRK05764, aspartate aminotransferase; Provisional.	0
NZ_CP053210.1\|WP_001138818.1\|1446525_1447710_-\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|237339	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional.	0
NZ_CP053210.1\|WP_000813910.1\|1443330_1444515_+\|CDF-family-manganese-efflux-transporter-MntE	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.47934e-101

>NZ_CP053210.1|WP_000039618.1|1426968_1427517_+|NAD(P)H-dependent-oxidoreductase
MSKKVLFIVGSLRQGSFNHQMALEAEKALAGKAEVSYLDYSALPLFSQDLEVPTHPAVAAAREAVLVADAIWIFSPVYNFSIPGTVKNLLDWLSRALDLSDTRGVSALQDKFVTVSSVANAGHDQLFAIYKDLLPFIRTQGVGDFTAARVNDSAWADGKLVLEETVLNSLEKQAQDLVEAIQ
>NZ_CP053210.1|WP_000747254.1|1426159_1426648_-|DUF5590-domain-containg-protein
MKKRQNKAKNNLLWQYGLGMTILFVVISASFLYMVSLSMKPYQTAKSEGEKLAQQYAGLEQADQVDLYNGLESYYSVLGRNKQQEALAVLIGKDDHKIYVYQLNQGVSQEKAETVSKEKGAGEIDKITFGRYQDKPIWEVKSGSDFYLVDFETGALVNKEGL
>NZ_CP053210.1|WP_000777787.1|1424975_1426163_-|pyridoxal-phosphate-dependent-aminotransferase
MKLSNRVLEMEESVTLAAGARAKALKAEGRDILSLTLGEPDFTTPKNIQDAAIASIRDGRASFYTVTSGLPELKAVVNSYFERFYGYSVASNQVTVAAGAKYSLYSFFMAVVNPGDEVIIPTPYWVSYGDQVKMAEGVPVFVSAKEDNHFKVTVEQLEAARTDKTKVLVLNSPSNPTGMIYTREELLAIGNWAVENDILILADDIYGRLVYNGHEFTPISSLSEAIRKQTVVINGVSKTYAMTGWRIGYAVGEADIIAAMSKIAGQTTSNPSAVAQYAAVEALSGEQDTVESMRQAFEERLNTIYPLLAEVPGFEVVKPQGAFYLFPNVKKAMEMKGYTDVTDFTTVILEEAEVALVTGAGFGAPENVRLSYATDLDTLKEAVERLKAFMGSEND
>NZ_CP053210.1|WP_000565234.1|1424617_1424983_-|VOC-family-protein
MIDHFEIKVKDLQISEGFYRSFLVPLDYKLAFKTSSLISFLSPNSPHPGGDFWLTQGTQDPVHFAFLAENKEEVQACYEAGIEASGRDNGVPGYRSEHPIYYAAFMIDLDGNNIEVVCHKE
>NZ_CP053210.1|WP_162489616.1|1423255_1424602_-|asparagine--tRNA-ligase
MMTKRVTIIDVKDYVGQEVTIGAWVANKSGKGKIAFLQLRDGTAFFQGVAFKPNFVEKFGEEVGLEKFDVIKRLSQETSVYVTGIVKEDERSKFGYELDITDIEVIGESQDYPITPKEHGTDFLMDNRHLWLRSRKQVAVLQIRNAIIYATYEFFDKNGFMKFDSPILSGNAAEDSTELFETDYFGTPAYLSQSGQLYLEAGAMALGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSYLTHDESLDLQEAYVKALLQGVLDRAPQALETLERDTELLKRYIAEPFKRITYDQAIDLLQEHENDEDADYEHLEHGDDFGSPHETWISNHFGVPTFVMNYPAAIKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREEDYDALVAKMDELGMDRTEYEFYLDLRKYGTVPHGGFGIGIERMVTFAAGIKHIREAIPFPRMLHRIKP
>NZ_CP053210.1|WP_001151785.1|1422812_1423103_-|30S-ribosomal-protein-S6
MAKYEILYIIRPNIEEEAKNALVARFDSILTDNGATVVESKTWEKRRLAYEIQDFREGLYHIVNVEANDDAALKEFDRLSKINADILRHMIVKIDA
>NZ_CP053210.1|WP_000609607.1|1422330_1422801_-|single-stranded-DNA-binding-protein
MINNVVLVGRMTRDAELRYTPSNVAVATFTLAVNRTFKSQNGEREADFINVVMWRQQAENLANWAKKGSLIGVTGRIQTRSYDNQQGQRVYVTEVVAENFQMLESRSVREGHTGGAYSAPTANYSAPTNSVPDFSRNENPFGATNPLDISDDDLPF
>NZ_CP053210.1|WP_000068664.1|1422059_1422299_-|30S-ribosomal-protein-S18
MAQQRRGGFKRRKKVDYIAANKIEYVDYKDTELLSRFVSERGKILPRRVTGTSAKNQRKVTTAIKRARVMALMPFVNED
>NZ_CP053210.1|WP_000339024.1|1420364_1421765_-|bifunctional-Cof-type-HAD-IIB-family-hydrolase/peptidylprolyl-isomerase
MDAKLRYKAKKIKIVFFDIDDTLRNSKTGFIPTTIPTVFKQLREKGILTGIASGRGIFGVVPEIRDLKPDFFVTLNGAYIEDKKGQVIYQHQIEKSDVEEYISWAKQEGIEYGLVGSHDAKLSTRTDMMSEAINPIYPDLDVDPDFHEKEDIYQMWTFEDKGDDLHLPDSLSDKLRMVRWHQHSSDIVPISGSKATGVEKVVEHLGLKPEKVMVFGDGLNDLELFDYAGISVAMGISHDKIKEKADYITKTLEEDGIFDALEVFGMVEKELHFPQVDIETVEGPLATIKTNHGDLRIKLFPEHAPKTVANFVSLSKDGYYDGVIFHRIIKDFMIQGGDPTGTGMGGESIYGESFEDEFSEELYNIRGALSMANAGPNTNGSQFFIVQNQHLPYSKKEITRGGWPEPIAEIYANQGGTPHLDRRHTVFGQLADEASYAVLDAIAAVETGAMDKPVEDVVIETIEIED
>NZ_CP053210.1|WP_000689597.1|1420003_1420363_-|S1-RNA-binding-domain-containing-protein
MKIGDKLKGRITGIQPYGAFVELETGDTGLIHISEIRTGFIENIHETLKVDEEVQVQVVDLDEFTGKASLSIRTLEEEKYQFPRRRRFSSDRFNYGFAPFRRMLPIWTGEALHHLKKTK
>NZ_CP053210.1|WP_001245197.1|1434720_1436205_+|helix-turn-helix-domain-containing-protein
MRNLLSTKVQRQLRLMETLIQNRNWMKLHELAEKLGCTERILKSDLNELRIAFPSINIQSSVNGIMIDLEVNTSVEDIYQYFLANSQSFQLLEYMFFNEGLPIYRTIENLYFSSANLYRLGRNITKVLSSQFQIELSFTPSEIRGNEIDIRYFFAQYFSERYYFLDWPFPDLPEEDLTEFADFFYKITNYPMRFSIYRMYKLMIAISIHRVKNGHFIDLPNHFYKEYYPLLKSIPNFQETLAYFSKHFGLEMTPDTIAQIFISFLQNDIFLDPQEFFNSLEDNSQARYSYQLLSQILERLSKQYKITFTNHDELIWHLHNTAFFERQEIFSTPILFEQKALTIKKFEVYFPDFMGSARQELAQYRQAIGQHDHPEQLEHLMYTILTHAENLSTQLLENRPPIKVLIISNFDHAISLTFVDMLSYYCNNRFTFDIWDELKTSPEILNQTDYDIIVSNFYIPGITKKFICRNHLSIMNLVNHLNTLSNEIHLSNTL
>NZ_CP053210.1|WP_000697775.1|1436255_1436984_-|peroxide-stress-protein-YaaA
MKILIPTAKEMNTDLPSIEAIPLKPESQTVLDALALYSASQLESFYKVSAEKAAEEFQNIQALKRQTAQHYPALKLFDGLMYRNIKRDKLTEAEQDYLENHVFITSALYGVVPALSPMAPHRLDFLMKLKVAGKTLKSHWKAVYDEALKKEEVIFSLLSSEFETVFSKEIRAKMVTFKFMEDRGGQLKIHSTISKKARGAFLTALIENQVQTVGEARRLNFAGFVYREDLSQPQGLVFVKEV
>NZ_CP053210.1|WP_000508269.1|1437062_1437227_-|YczI-family-protein
MGFYLMVASMLLGLLALKIGFSQFKEKKDKFLSILTSLAGTALVLVAVWLGWPK
>NZ_CP053210.1|WP_000822876.1|1437393_1438989_-|hypothetical-protein
MKRIVFELIFIATTWYIFLPPLNLTSWEFLFFLCGHLLVVAILFGFGKGINLVKTVHVRHGKAEAALNLEGFKINRLGKILLASIGGILLLAALVSLVTSSMFQAKNYANVVTVTEKDFTEFPRSDTSKVPILDRSTAEKIGDRYLGSLTDKVSQYVAADTYTQLTIDGKPYRVTPLEYADPIKWFNNQAKGIGEYIKVDMVTGNADLVDLKTPIKYSDSEYFNRDVKRHLRLKYPTKIFKTPSFEVDDEGNPFYVATVYQKQFGLAVPRPASVIILDATNGETKEYSLSDVPEWVDRIYPAEETIEQINYNGKYKDGFLNAMISKKNVTQTTNGYNYLSIGNDIYLYTGVTSANADESNLGFILENMRTGEITKYSLASATEESARESAEGAVQEKSYKATFPILINLNDKPLYIMGLKDNAGLVKEYALVDAVEYQNVIVATTVEEMLSKYANKNDLEIDNATTESIKGVVADLKSAVIKGDTVYFFKVDGKIYKVKASVSDDLPYLENGKTFEGQVGKDNYLKTFKVQ
>NZ_CP053210.1|WP_000412224.1|1439000_1439411_-|peptide-deformylase
MEKKIVKDILFLSQVSQPASQEDLYLARDLQDTLLANRDTCVGLAANMIGVQKRVIIFNLGLVPVVMFNPVLLSFEGSYEAEEGCLSLVGVRSTKRYETTRLAYRDSKWQEQTITLTGFPAQICQHELDHLEGRII
>NZ_CP053210.1|WP_001277403.1|1439526_1440318_-|glutathione-dependent-disulfide-bond-oxidoreductase
MSAYQLPTVWQDEASNQGAFTGLNRPTAGARFEQNLPKGEQAFQLYSLGTPNGVKVTILLEELLEAGFKEAAYDLYKIAIMDGDQFGSDFVKLNPNSKIPALLDQSGTENVRVFESAHILLYLAEKFGAFLPSNPVEKVEVLNWLFWQAGAAPFLGGGFGHFFNYAPEKLEYPINRFTMEVKRQLDLLDKELAQKPYIAGNDYTIADIAIWSWYGQLVQGNLYQGSAKFLDASSYQNLVKWAEKIANRPAVKRGLEVTYTEIK
>NZ_CP053210.1|WP_000032465.1|1440330_1443027_-|cation-translocating-P-type-ATPase
MSKEQKRQAFYTQSPEEVLQAVDATEQGLSSSEAEKRLAEFGHNELEEGEKRSILVKFIEQFKDLMIIILVAAAILSVVTSGGEDIADAIIILAVVIINAAFGVYQEGKAEEAIEALKSMSSPVARVLRDGHMAEIDSKELVPGDIVALEAGDVVPADLRLLEANSLKIEEAALTGESVPVEKDLSVELATDAGIGDRVNMAFQNSNVTYGRGMGVVVNTGMYTEVGHIAGMLQDADETDTPLKQNLNNLSKVLTYAILVIALITFVVGVFIQGKNPLGELLTSVALAVAAIPEGLPAIVTIVLSLGTQVLAKRHSIVRKLPAVETLGSTEIIASDKTGTLTMNKMTVEKVFYDAVLHDSADDIELGLEMPLLRSVVLANDTKIDVEGNLIGDPTETAFIQYALDKGYDVKGFLEKYPRVAELPFDSDRKLMSTVHPLPDGRFLVAVKGAPDQLLKRCLLRDKAGDIAPIDEKVTNLIHTNNSEMAHQALRVLAGAYKIIDSIPENLTSEELENDLIFTGLIGMIDPERPEAAEAVRVAKEAGIRPIMITGDHQDTAEAIAKRLGIIDANDTEGHVLTGAELNELSDEEFEKVVGQYSVYARVSPEHKVRIVKAWQKQGKVVAMTGDGVNDAPALKTADIGIGMGITGTEVSKGASDMILADDNFATIIVAVEEGRKVFSNIQKTIQYLLSANTAEVLTIFLSTLFGWDVLQPVHLLWINLVTDTFPAIALGVEPAEPGVMNHKPRGRKASFFSGGVLSSIIYQGVLQAALVMSVYGLAIAYPVHVGDNHAIHADALTMAFATLGLIQLFHAYNVKSVYQSILTVGPFKSKTFNWSILVSFILLMATIVVEPLEGIFHVTKLDLSQWGIVMAGSFSMIIIVEIVKFIQRKLGFDKNAI
>NZ_CP053210.1|WP_000813910.1|1443330_1444515_+|CDF-family-manganese-efflux-transporter-MntE
MKQSISNLKLAERGAIISISTYLILSAAKLAAGHLLHSSSLVADGFNNVSDIIGNVALLIGIRMARQPADRDHRFGHWKIEDLASLITSIIMFYVGFDILRDTIQKILSREETVIDPLGATLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDAVTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTYGSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVYKKLLMREQLIDQGNQLEELLTDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQKTKLICYELDGIIHTSIWRRHETWQNIFHQETKKE
>NZ_CP053210.1|WP_001279158.1|1444657_1446529_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFDDRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLRRRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELERAGLTEYQGNYQDYVRLKAEQDERDATLLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQDVSFAYENKPILQDFNLLVQVKDRIGIVGDNGVGKSTLLNLIAGSLEPIAGQVVIGETVRIAYFSQQIEGLDESKRVINYLQEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENFLQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEKQEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS
>NZ_CP053210.1|WP_001138818.1|1446525_1447710_-|CCA-tRNA-nucleotidyltransferase
MPSEFQKALPVLEKIKEAGFEAYFVGGSVRDALLHSPIHDVDIATSSYPEETKQIFPRTADIGIEHGTVLVLDGDEEYEVTTFRTEDVYVDYRRPSAVSFVRSLEEDLKRRDFTVNAFALDETGEIVDLFHGLEDLEKQVLRAVGVASERFNEDALRIMRGFRFQASLGFALEPETFKAMKTLTPLLENISVERTFVEFDKLLLAPFWRRGLASMIESQAYDYLPDMASSQNKLNRLFDLETDFTFESSEQAWAALLWALEIENAQSFLKSWKTSRQFAKQVQDLLIILALRENGELSKRDCYRFDIDLLLQAENLRQARGKEVNPQAITEKYQSLTIHDKKEIQINGDILIKEYGYQPGPDLGEILTEIEFAIVDGELENNREAIHAYLREKK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	419022-419047	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	552107-552132	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	640268-640293	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	790462-790487	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	1036996-1037021	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	1853845-1853870	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	33559-33584	1	0.962
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	129247-129272	1	0.962
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP053210.1	1381470-1381495	1	0.962

1. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 419022-419047, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

2. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 552107-552132, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

3. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 640268-640293, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

4. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 790462-790487, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

5. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 1036996-1037021, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

6. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 1853845-1853870, mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

7. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 33559-33584, mismatch: 1, identity: 0.962

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggttctttgtcaactgtagtgggttg	Protospacer
**.***********************

8. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 129247-129272, mismatch: 1, identity: 0.962

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctccttgtcaactgtagtgggttg	Protospacer
*****.********************

9. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to position: 1381470-1381495, mismatch: 1, identity: 0.962

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctttttgtcaactgtagtgggttg	Protospacer
****.*********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448640	Streptococcus satellite phage Javan752, complete genome	3886-3939	0	1.0
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448634	Streptococcus satellite phage Javan747, complete genome	2572-2625	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448641	Streptococcus satellite phage Javan753, complete genome	2187-2216	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448433	Streptococcus satellite phage Javan328, complete genome	2779-2808	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448628	Streptococcus satellite phage Javan741, complete genome	3052-3081	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448615	Streptococcus satellite phage Javan728, complete genome	3051-3080	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448420	Streptococcus satellite phage Javan309, complete genome	2778-2807	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448620	Streptococcus satellite phage Javan733, complete genome	3053-3082	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448614	Streptococcus satellite phage Javan727, complete genome	3128-3157	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448640	Streptococcus satellite phage Javan752, complete genome	1927-1956	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448619	Streptococcus satellite phage Javan732, complete genome	3128-3157	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448610	Streptococcus satellite phage Javan723, complete genome	2638-2667	0	1.0
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448623	Streptococcus satellite phage Javan736, complete genome	2108-2137	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MK448817	Streptococcus phage Javan59, complete genome	41451-41476	0	1.0
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	KY065475	Streptococcus phage IPP35, complete genome	21703-21728	0	1.0
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448643	Streptococcus satellite phage Javan755, complete genome	6648-6701	1	0.981
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448616	Streptococcus satellite phage Javan729, complete genome	8549-8602	1	0.981
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MH937476	Streptococcus phage CHPC933, partial genome	26090-26115	1	0.962
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MK448405	Streptococcus satellite phage Javan293, complete genome	10773-10798	1	0.962
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448620	Streptococcus satellite phage Javan733, complete genome	5014-5067	2	0.963
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448623	Streptococcus satellite phage Javan736, complete genome	6061-6114	2	0.963
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP015284	Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence	83114-83139	2	0.923
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016699	Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence	36882-36907	2	0.923
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP015284	Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence	55246-55271	3	0.885
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	118712-118737	3	0.885
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	10601-10626	3	0.885
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MN480762	Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence	168256-168281	3	0.885
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_012642	Streptococcus parasanguinis plasmid pFW213, complete sequence	1559-1584	3	0.885
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	98134-98159	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_019430	Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence	14623-14648	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP018832	Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence	180663-180688	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP040906	Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence	113827-113852	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP041262	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence	55028-55053	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP043524	Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_05, complete sequence	28577-28602	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	80440-80465	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP014450	Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence	29007-29032	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP027518	Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence	150481-150506	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	174627-174652	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP027502	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence	55405-55430	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016715	Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence	20507-20532	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016744	Lactococcus lactis subsp. cremoris strain JM2 plasmid pJM2C, complete sequence	19049-19074	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP040803	Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence	65780-65805	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	MT074686	Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence	73339-73364	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP025756	Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence	63471-63496	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135279	Enterococcus faecium isolate E6975 plasmid 2	44790-44815	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135236	Enterococcus faecium isolate E7067 plasmid 2	36602-36627	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_AP018502	Lactococcus lactis subsp. cremoris strain C4 plasmid pC43, complete sequence	13247-13272	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP041256	Enterococcus faecium strain 515 plasmid p26, complete sequence	10618-10643	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP031539	Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107A, complete sequence	22010-22035	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135476	Enterococcus faecium isolate E8423 plasmid 2	151357-151382	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016738	Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3B, complete sequence	19025-19050	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135220	Enterococcus faecium isolate E7040 plasmid 2	36626-36651	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_017493	Lactococcus lactis subsp. cremoris A76 plasmid pQA549, complete sequence	16780-16805	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_021987	Enterococcus faecium Aus0085 plasmid p1, complete sequence	76657-76682	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135358	Enterococcus faecium isolate E7948 plasmid 2	169635-169660	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP044265	Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence	110151-110176	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016708	Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence	14626-14651	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR134106	Enterococcus faecium isolate E6043 plasmid 2	36626-36651	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP023514	Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence	139818-139843	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_017478	Lactococcus lactis plasmid pSK11L, complete sequence	19227-19252	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP020439	Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence	76004-76029	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_AP022342	Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence	223065-223090	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP040876	Enterococcus faecium strain DB-1 plasmid punnamed2	74006-74031	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	46624-46649	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP035655	Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence	78877-78902	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_008506	Lactococcus lactis subsp. cremoris SK11 plasmid 4, complete sequence	44476-44501	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	72510-72535	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	72512-72537	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016733	Lactococcus lactis subsp. cremoris strain JM4 plasmid pJM4E, complete sequence	19072-19097	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	78880-78905	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP051519	Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence	39089-39114	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP041271	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence	55027-55052	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_LR135308	Enterococcus faecium isolate E7240 plasmid 2	140237-140262	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP040237	Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence	55029-55054	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NC_020208	Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence	121227-121252	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	64833-64858	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP018827	Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence	180663-180688	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP012461	Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence	55438-55463	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_MF150536	Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence	19161-19186	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP016687	Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence	17330-17355	4	0.846
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP020429	Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence	97427-97452	5	0.808
NZ_CP053210_4	4.1\|790512\|26\|NZ_CP053210\|CRISPRCasFinder	790512-790537	26	NZ_CP018188	Streptococcus salivarius strain ICDC2 plasmid, complete sequence	47124-47149	5	0.808
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448889	Streptococcus phage Javan262, complete genome	13152-13181	6	0.8
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448612	Streptococcus satellite phage Javan725, complete genome	3459-3512	7	0.87
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448672	Streptococcus phage Javan117, complete genome	25572-25601	7	0.767
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	MK448849	Streptococcus phage Javan128, complete genome	24992-25021	7	0.767
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448629	Streptococcus satellite phage Javan742, complete genome	5189-5242	8	0.852
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448646	Streptococcus satellite phage Javan758, complete genome	5188-5241	8	0.852
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448495	Streptococcus satellite phage Javan434, complete genome	5544-5597	8	0.852
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448410	Streptococcus satellite phage Javan298, complete genome	3651-3704	8	0.852
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP015129	Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence	5128-5157	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	8387-8416	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP032661	Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence	22240-22269	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NC_021520	Lactobacillus plantarum 16 plasmid Lp16L, complete sequence	1702-1731	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP028234	Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence	12877-12906	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP028246	Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence	8549-8578	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP020099	Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence	8125-8154	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP032657	Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence	8799-8828	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP013154	Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence	6717-6746	8	0.733
NZ_CP053210_2	2.1\|13388\|30\|NZ_CP053210\|CRISPRCasFinder	13388-13417	30	NZ_CP054260	Lactobacillus plantarum strain TCI507 plasmid unnamed1	7422-7451	8	0.733
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	KT337367	Streptococcus phage phiARI0826b, partial genome	32393-32446	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	KT337369	Streptococcus phage phiARI0831b, partial genome	29447-29500	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448555	Streptococcus satellite phage Javan592, complete genome	3567-3620	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448455	Streptococcus satellite phage Javan364, complete genome	3325-3378	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448547	Streptococcus satellite phage Javan572, complete genome	3568-3621	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448535	Streptococcus satellite phage Javan550, complete genome	3568-3621	11	0.796
NZ_CP053210_1	1.1\|11408\|54\|NZ_CP053210\|CRISPRCasFinder	11408-11461	54	MK448544	Streptococcus satellite phage Javan564, complete genome	2945-2998	11	0.796

1. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448640 (Streptococcus satellite phage Javan752, complete genome) position: , mismatch: 0, identity: 1.0

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	Protospacer
******************************************************

2. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448634 (Streptococcus satellite phage Javan747, complete genome) position: , mismatch: 0, identity: 1.0

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	Protospacer
******************************************************

3. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448641 (Streptococcus satellite phage Javan753, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

4. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448433 (Streptococcus satellite phage Javan328, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

5. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448628 (Streptococcus satellite phage Javan741, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

6. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448615 (Streptococcus satellite phage Javan728, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

7. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448420 (Streptococcus satellite phage Javan309, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

8. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448620 (Streptococcus satellite phage Javan733, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

9. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448614 (Streptococcus satellite phage Javan727, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

10. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448640 (Streptococcus satellite phage Javan752, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

11. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448619 (Streptococcus satellite phage Javan732, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

12. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448610 (Streptococcus satellite phage Javan723, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

13. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448623 (Streptococcus satellite phage Javan736, complete genome) position: , mismatch: 0, identity: 1.0

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacgtttttagcctact	Protospacer
******************************

14. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MK448817 (Streptococcus phage Javan59, complete genome) position: , mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

15. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to KY065475 (Streptococcus phage IPP35, complete genome) position: , mismatch: 0, identity: 1.0

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggttg	Protospacer
**************************

16. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448643 (Streptococcus satellite phage Javan755, complete genome) position: , mismatch: 1, identity: 0.981

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcacatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	Protospacer
******.***********************************************

17. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448616 (Streptococcus satellite phage Javan729, complete genome) position: , mismatch: 1, identity: 0.981

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcacatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	Protospacer
******.***********************************************

18. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MH937476 (Streptococcus phage CHPC933, partial genome) position: , mismatch: 1, identity: 0.962

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggtag	Protospacer
************************ *

19. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MK448405 (Streptococcus satellite phage Javan293, complete genome) position: , mismatch: 1, identity: 0.962

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggtag	Protospacer
************************ *

20. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448620 (Streptococcus satellite phage Javan733, complete genome) position: , mismatch: 2, identity: 0.963

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcgcatgcctcatgctctcggtctgcaaatttctgagcgtgggtcttttt	Protospacer
***************************  *************************

21. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448623 (Streptococcus satellite phage Javan736, complete genome) position: , mismatch: 2, identity: 0.963

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cctgtcacatgcctcatgctctcggtcgccaaacttctgagcgtgggtcttttt	Protospacer
******.**************************.********************

22. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 2, identity: 0.923

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaactgtagtgggtga	Protospacer
************************ .

23. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016699 (Lactococcus lactis subsp. lactis strain 275 plasmid p275A, complete sequence) position: , mismatch: 2, identity: 0.923

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctttgtcaaccgtagtgggtag	Protospacer
**************.********* *

24. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP015284 (Streptococcus salivarius strain ATCC 25975 plasmid, complete sequence) position: , mismatch: 3, identity: 0.885

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggttctttgtcaactgtagtgggtga	Protospacer
**.********************* .

25. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 3, identity: 0.885

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctccttgtcaactgtagtgggtga	Protospacer
*****.****************** .

26. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 3, identity: 0.885

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctctgtcaactgtagtgggtga	Protospacer
******.***************** .

27. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MN480762 (Streptococcus salivarius strain NU10 plasmid pSsal-NU10, complete sequence) position: , mismatch: 3, identity: 0.885

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctctgtcaactgtagtgggtga	Protospacer
******.***************** .

28. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_012642 (Streptococcus parasanguinis plasmid pFW213, complete sequence) position: , mismatch: 3, identity: 0.885

ggctctttgtcaactgtagtgggttg	CRISPR spacer
tgctcattgtcaactgtagtgggtgg	Protospacer
 **** ****************** *

29. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggatccttgtcaactgtagtgggtga	Protospacer
** **.****************** .

30. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_019430 (Lactococcus lactis subsp. cremoris UC509.9 plasmid pCIS8, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

31. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP018832 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p1_ISMMS_VRE9, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

32. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP040906 (Enterococcus faecium strain FB-1 plasmid punnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

33. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP041262 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

34. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP043524 (Lactococcus lactis subsp. lactis bv. diacetylactis strain SD96 plasmid pSD96_05, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

35. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

36. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP014450 (Enterococcus faecium strain ATCC 700221 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

37. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP027518 (Enterococcus faecium strain AUSMDU00004024 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

38. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

39. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP027502 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

40. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016715 (Lactococcus lactis subsp. lactis strain UC063 plasmid pUC063A, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

41. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016744 (Lactococcus lactis subsp. cremoris strain JM2 plasmid pJM2C, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

42. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP040803 (Streptococcus salivarius strain LAB813 plasmid pSAL813, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctcttagtcaactgtagtgagtga	Protospacer
******* *************.** .

43. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to MT074686 (Enterococcus faecium strain E1077 plasmid pE1077-217, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

44. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP025756 (Enterococcus faecium strain AALTL plasmid pEFA-99d7, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

45. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135279 (Enterococcus faecium isolate E6975 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

46. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135236 (Enterococcus faecium isolate E7067 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

47. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_AP018502 (Lactococcus lactis subsp. cremoris strain C4 plasmid pC43, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

48. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP041256 (Enterococcus faecium strain 515 plasmid p26, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

49. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP031539 (Lactococcus lactis subsp. cremoris strain 3107 plasmid p3107A, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

50. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135476 (Enterococcus faecium isolate E8423 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

51. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016738 (Lactococcus lactis subsp. cremoris strain JM3 plasmid pJM3B, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

52. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135220 (Enterococcus faecium isolate E7040 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

53. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_017493 (Lactococcus lactis subsp. cremoris A76 plasmid pQA549, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

54. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_021987 (Enterococcus faecium Aus0085 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

55. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135358 (Enterococcus faecium isolate E7948 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

56. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP044265 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

57. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016708 (Lactococcus lactis subsp. cremoris strain UC109 plasmid pUC109B, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

58. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR134106 (Enterococcus faecium isolate E6043 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

59. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP023514 (Enterococcus sp. FDAARGOS_375 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

60. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_017478 (Lactococcus lactis plasmid pSK11L, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

61. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP020439 (Streptococcus equinus strain FDAARGOS_251 plasmid unamed1 sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
ggctctatgtcaattgtagtgggtga	Protospacer
****** ******.********** .

62. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_AP022342 (Enterococcus faecium strain KUHS13 plasmid pKO1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

63. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP040876 (Enterococcus faecium strain DB-1 plasmid punnamed2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

64. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

65. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP035655 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

66. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_008506 (Lactococcus lactis subsp. cremoris SK11 plasmid 4, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

67. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

68. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

69. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016733 (Lactococcus lactis subsp. cremoris strain JM4 plasmid pJM4E, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

70. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP035649 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

71. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP051519 (Lactococcus lactis subsp. cremoris strain F plasmid pScrF52, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

72. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP041271 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

73. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_LR135308 (Enterococcus faecium isolate E7240 plasmid 2) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

74. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP040237 (Enterococcus faecium strain VB3025 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

75. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NC_020208 (Enterococcus faecium ATCC 8459 = NRRL B-2354 plasmid pNB2354_1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

76. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

77. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP018827 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p1_ISMMS_VRE12, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

78. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP012461 (Enterococcus faecium strain ISMMS_VRE_7 plasmid ISMMS_VRE7_p1, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

79. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_MF150536 (Lactococcus lactis subsp. lactis bv. diacetylactis strain FM03P plasmid pLd8, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

80. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP016687 (Lactococcus lactis subsp. cremoris strain 158 plasmid p158C, complete sequence) position: , mismatch: 4, identity: 0.846

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gggtctatgtcaactgtagtgggtga	Protospacer
** *** ***************** .

81. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP020429 (Streptococcus sp. FDAARGOS_192 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

ggctctttgtcaactgtagtgggttg	CRISPR spacer
gtatgtttgtcaactgtagtgggtga	Protospacer
*  * ******************* .

82. spacer 4.1|790512|26|NZ_CP053210|CRISPRCasFinder matches to NZ_CP018188 (Streptococcus salivarius strain ICDC2 plasmid, complete sequence) position: , mismatch: 5, identity: 0.808

ggctctttgtcaactgtagtgggttg	CRISPR spacer
agctcgatgtcaactgtagtgggtga	Protospacer
.****  ***************** .

83. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448889 (Streptococcus phage Javan262, complete genome) position: , mismatch: 6, identity: 0.8

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tagttgatttaacaacattttttgctgctt	Protospacer
****************.***** **.  .*

84. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448612 (Streptococcus satellite phage Javan725, complete genome) position: , mismatch: 7, identity: 0.87

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cttgtctacagcctcatgctctcggtcgccaaatttctgaacgtggggcttttt	Protospacer
*.****    ******************************.****** ******

85. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448672 (Streptococcus phage Javan117, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

86. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to MK448849 (Streptococcus phage Javan128, complete genome) position: , mismatch: 7, identity: 0.767

tagttgatttaacaacgtttttagcctact	CRISPR spacer
ttgttgatttaacaatgtttttggcagctt	Protospacer
* *************.******.**   .*

87. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448629 (Streptococcus satellite phage Javan742, complete genome) position: , mismatch: 8, identity: 0.852

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cttgcctacagcctcatgctctcggtcgccaaacttctgagcgtggggcttttt	Protospacer
*.**.*    ***********************.************* ******

88. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448646 (Streptococcus satellite phage Javan758, complete genome) position: , mismatch: 8, identity: 0.852

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cttgcctacagcctcatgctctcggtcgccaaacttctgagcgtggggcttttt	Protospacer
*.**.*    ***********************.************* ******

89. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448495 (Streptococcus satellite phage Javan434, complete genome) position: , mismatch: 8, identity: 0.852

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cttgcctacagcctcatgctctcggtcgccaaatttctgagcatggggcttttt	Protospacer
*.**.*    ********************************.**** ******

90. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448410 (Streptococcus satellite phage Javan298, complete genome) position: , mismatch: 8, identity: 0.852

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
cttgcctacagcctcatgctctcggtcgccaaatttctgagcatggggcttttt	Protospacer
*.**.*    ********************************.**** ******

91. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP015129 (Lactobacillus plantarum strain CAUH2 plasmid pCAUH203, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

92. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

93. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP032661 (Lactobacillus pentosus strain ZFM94 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

94. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NC_021520 (Lactobacillus plantarum 16 plasmid Lp16L, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

95. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP028234 (Lactobacillus plantarum strain SRCM101222 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

96. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP028246 (Lactobacillus plantarum strain SRCM101518 plasmid unnamed5, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

97. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP020099 (Lactobacillus plantarum strain K25 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

98. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP032657 (Lactobacillus pentosus strain ZFM222 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

99. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP013154 (Lactobacillus plantarum strain MF1298 plasmid pMF1298-7, complete sequence) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

100. spacer 2.1|13388|30|NZ_CP053210|CRISPRCasFinder matches to NZ_CP054260 (Lactobacillus plantarum strain TCI507 plasmid unnamed1) position: , mismatch: 8, identity: 0.733

tagttgatttaacaacgtttttagcctact	CRISPR spacer
tcgttgatataacaacgtttttaacacttc	Protospacer
* ****** **************.* . ..

101. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to KT337367 (Streptococcus phage phiARI0826b, partial genome) position: , mismatch: 11, identity: 0.796

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
gtaagtactagcctcatgctctcggtcgccaaacttctgagcgtggggcttttt	Protospacer
 . . ..*  ***********************.************* ******

102. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to KT337369 (Streptococcus phage phiARI0831b, partial genome) position: , mismatch: 11, identity: 0.796

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
gtaagtactagcctcatgctctcggtcgccaaacttctgagcgtggggcttttt	Protospacer
 . . ..*  ***********************.************* ******

103. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448555 (Streptococcus satellite phage Javan592, complete genome) position: , mismatch: 11, identity: 0.796

cctgtcgca----tgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
----ttgtgtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttgg	Protospacer
    *.*..    ********************* **************** ****

104. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448455 (Streptococcus satellite phage Javan364, complete genome) position: , mismatch: 11, identity: 0.796

cctgtcgcatgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
gtactgaagttcctcacgctctcggtcgccaaatttctgagcgtggggcttttt	Protospacer
 .  * . .* *****.****************************** ******

105. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448547 (Streptococcus satellite phage Javan572, complete genome) position: , mismatch: 11, identity: 0.796

cctgtcgca----tgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
----ttgtgtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttgg	Protospacer
    *.*..    ********************* **************** ****

106. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448535 (Streptococcus satellite phage Javan550, complete genome) position: , mismatch: 11, identity: 0.796

cctgtcgca----tgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
----ttgtgtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttgg	Protospacer
    *.*..    ********************* **************** ****

107. spacer 1.1|11408|54|NZ_CP053210|CRISPRCasFinder matches to MK448544 (Streptococcus satellite phage Javan564, complete genome) position: , mismatch: 11, identity: 0.796

cctgtcgca----tgcctcatgctctcggtcgccaaatttctgagcgtgggtcttttt	CRISPR spacer
----ttgtgtaattgcctcatgctctcggtcgcctaatttctgagcgtggggctttgg	Protospacer
    *.*..    ********************* **************** ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5090 : 15343

Streptococcus_phage(88.89%)

integrase

attL 12434:12449|attR 18364:18379

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000824779.1\|5090_5594_-	hypothetical protein	A0A1X9I5V2	Streptococcus_phage	9.5e-50	54.8
WP_000173109.1\|5662_6187_-	hypothetical protein	A0A1X9I5U4	Streptococcus_phage	4.0e-35	47.1
WP_000694581.1\|6205_6379_-	sporulation protein Cse60	NA	NA	NA	NA
WP_000264046.1\|6988_8443_-	DNA primase	Q9AZI5	Lactococcus_phage	1.9e-66	41.1
WP_000158206.1\|8522_9383_-	primase C-terminal domain-containing protein	A0A1X9I6L2	Streptococcus_phage	6.5e-123	74.5
WP_000492128.1\|9522_9798_-	hypothetical protein	A0A1X9I5U9	Streptococcus_phage	7.3e-20	56.8
WP_000058847.1\|9790_10132_-	hypothetical protein	NA	NA	NA	NA
WP_000122652.1\|10112_10406_-	hypothetical protein	NA	NA	NA	NA
WP_001003748.1\|10402_10618_-	hypothetical protein	NA	NA	NA	NA
WP_000171265.1\|10619_10820_-	hypothetical protein	NA	NA	NA	NA
WP_000393070.1\|10816_11269_-	hypothetical protein	NA	NA	NA	NA
WP_001009512.1\|11728_11914_-	hypothetical protein	NA	NA	NA	NA
WP_001156571.1\|12010_12226_-	helix-turn-helix transcriptional regulator	A0A141E0Q1	Streptococcus_phage	8.8e-13	58.8
WP_000369225.1\|12392_13130_+	helix-turn-helix domain-containing protein	A0A141E1S0	Streptococcus_phage	1.3e-76	64.8
12434:12449	attL	NA	NA	NA	NA
WP_029745112.1\|13645_13948_+	hypothetical protein	C5IUM1	Streptococcus_phage	2.8e-12	50.0
WP_000704695.1\|14176_15343_+\|integrase	site-specific integrase	A0A1X9I5Y5	Streptococcus_phage	1.0e-102	50.5
18364:18379	attR	NA	NA	NA	NA

DBSCAN-SWA_2

57772 : 69228

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000668290.1\|57772_59926_+	peptide cleavage/export ABC transporter	W8CYL7	Bacillus_phage	1.0e-44	28.0
WP_000801610.1\|59938_61288_+	HlyD family secretion protein	NA	NA	NA	NA
WP_000043300.1\|61457_62165_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	1.8e-41	39.2
WP_000361213.1\|62366_66092_+	phosphoribosylformylglycinamidine synthase	A6N228	Microbacterium_phage	1.4e-36	25.5
WP_000220627.1\|66184_67627_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.8e-54	35.1
WP_000182575.1\|67663_68686_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SE90	Cyanophage	1.2e-64	43.9
WP_000717501.1\|68682_69228_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.7e-24	35.0

DBSCAN-SWA_3

121434 : 145868

Planktothrix_phage(50.0%)

bacteriocin,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075218952.1\|121434_121731_+\|bacteriocin	lactococcin 972 family bacteriocin	NA	NA	NA	NA
WP_000724257.1\|121782_123891_+\|bacteriocin	bacteriocin-associated integral membrane family protein	NA	NA	NA	NA
WP_000571330.1\|123887_124529_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.3e-23	34.8
WP_001038474.1\|124735_125542_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_099516442.1\|125507_125978_+	argininosuccinate synthase	NA	NA	NA	NA
WP_001268157.1\|126266_127130_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000915346.1\|127595_127934_+	peptidase C39	NA	NA	NA	NA
WP_000424429.1\|127911_128283_+\|bacteriocin	SPH_0218 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000989850.1\|128290_128503_+	hypothetical protein	NA	NA	NA	NA
WP_050090436.1\|129383_130442_+	hypothetical protein	NA	NA	NA	NA
WP_001835159.1\|130756_131734_+	hypothetical protein	NA	NA	NA	NA
WP_000424416.1\|132110_132485_+\|bacteriocin	SPH_0224 family bacteriocin-like peptide	NA	NA	NA	NA
WP_000619770.1\|132692_133595_+	hypothetical protein	NA	NA	NA	NA
WP_000424446.1\|133650_133983_+	hypothetical protein	NA	NA	NA	NA
WP_001066696.1\|133979_134708_+	hypothetical protein	NA	NA	NA	NA
WP_000770317.1\|135758_135998_+	hypothetical protein	NA	NA	NA	NA
WP_001809447.1\|135982_136261_+	hypothetical protein	M1Q0Z8	Streptococcus_phage	6.7e-21	51.6
WP_054366040.1\|136547_138404_+	pneumococcal surface protein A	NA	NA	NA	NA
WP_001282984.1\|138804_139926_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_000193617.1\|140066_140522_+	NUDIX hydrolase	NA	NA	NA	NA
WP_000220960.1\|140531_142445_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_001809448.1\|142576_142726_-	hypothetical protein	NA	NA	NA	NA
WP_000331980.1\|142797_144477_-	ribonuclease J	NA	NA	NA	NA
WP_000639577.1\|144478_144712_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA
WP_000974047.1\|145528_145681_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	NA	NA	NA	NA
WP_000180805.1\|145682_145868_-\|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	NA	NA	NA	NA

DBSCAN-SWA_4

327331 : 372918

Streptococcus_phage(25.0%)

holin,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001063385.1\|327331_329437_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	3.4e-117	37.6
WP_000032550.1\|329731_330214_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_000743616.1\|330308_331793_-	DUF1846 domain-containing protein	NA	NA	NA	NA
WP_001156848.1\|331945_333553_+	alpha-glucosidase	NA	NA	NA	NA
WP_001022222.1\|333711_333864_+	hypothetical protein	NA	NA	NA	NA
WP_000091094.1\|334622_336068_+	LCP family protein	A0A1X9I5X1	Streptococcus_phage	2.1e-134	60.3
WP_000565343.1\|336069_336801_+	tyrosine protein phosphatase	NA	NA	NA	NA
WP_000664150.1\|336809_337502_+	capsular polysaccharide biosynthesis protein CpsC	A0A1X9I5E1	Streptococcus_phage	3.2e-64	58.5
WP_001142539.1\|337511_338201_+	tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	6.4e-73	62.3
WP_001013464.1\|338215_339583_+	sugar transferase	NA	NA	NA	NA
WP_001028657.1\|339678_340623_+	glycosyltransferase family 8 protein	A0A2P0VP84	Tetraselmis_virus	4.2e-06	24.5
WP_000701497.1\|340660_340822_+	LicD family protein	NA	NA	NA	NA
WP_000029904.1\|340893_341613_+	CDP-alcohol phosphatidyltransferase family protein	NA	NA	NA	NA
WP_000520502.1\|341615_342602_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_000925817.1\|342601_343945_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA
WP_170835819.1\|344063_345482_+	hypothetical protein	NA	NA	NA	NA
WP_000676146.1\|345975_346845_+	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	2.4e-101	63.9
WP_000131458.1\|346845_347439_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	H9NC63	Sphingomonas_phage	3.9e-10	33.1
WP_170835794.1\|347451_348501_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	4.1e-71	44.2
WP_000600911.1\|348566_349418_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.1e-26	35.8
WP_000927990.1\|349493_349928_+\|transposase	transposase	A0A218MNE7	uncultured_virus	3.6e-05	24.6
WP_001809483.1\|350520_350679_+\|transposase	transposase domain-containing protein	NA	NA	NA	NA
WP_000842560.1\|350880_352863_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_001032497.1\|353162_358466_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA
WP_001040001.1\|358632_360792_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_000248787.1\|360788_361385_-	Holliday junction resolvase RecU	A0A1L2JY30	Aeribacillus_phage	8.7e-18	33.9
WP_000179551.1\|361450_361978_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_000146522.1\|362047_362377_+	cell division regulator GpsB	NA	NA	NA	NA
WP_000711402.1\|362862_364020_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_000039258.1\|364032_365427_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA
WP_000158783.1\|365502_366927_+	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	2.1e-41	29.6
WP_000518018.1\|366938_367628_+	response regulator transcription factor	NA	NA	NA	NA
WP_000771090.1\|367725_368691_+\|holin	choline-binding protein CbpC	NA	NA	NA	NA
WP_000771122.1\|368709_369708_+\|holin	choline-binding protein CbpJ	NA	NA	NA	NA
WP_000765699.1\|369825_371058_-	MFS transporter	NA	NA	NA	NA
WP_001820155.1\|371587_371926_-	lantibiotic-modifying protein	NA	NA	NA	NA
WP_000619579.1\|372588_372918_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_5

431977 : 501642

Bacillus_phage(18.18%)

tRNA,bacteriocin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001809501.1\|431977_433006_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000280769.1\|433261_434107_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_000904604.1\|434253_435315_-	DNA polymerase IV	NA	NA	NA	NA
WP_000260643.1\|435663_437988_+	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	7.9e-115	32.9
WP_001812735.1\|438355_438574_-	hypothetical protein	NA	NA	NA	NA
WP_001809503.1\|438669_438918_-	hypothetical protein	NA	NA	NA	NA
WP_000384133.1\|438910_439195_-	hypothetical protein	NA	NA	NA	NA
WP_001809505.1\|439806_439977_-\|transposase	transposase	NA	NA	NA	NA
WP_000628994.1\|440628_441852_-	ROK family transcriptional regulator	NA	NA	NA	NA
WP_001059630.1\|442018_443341_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_000236915.1\|443342_445229_+	DUF4838 domain-containing protein	NA	NA	NA	NA
WP_000836780.1\|445396_445741_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA
WP_000429422.1\|445750_447163_+	6-phospho-beta-galactosidase	NA	NA	NA	NA
WP_000359749.1\|447231_448911_+	PTS transporter subunit EIIC	NA	NA	NA	NA
WP_001809506.1\|449036_450476_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_000691685.1\|450479_451829_-	Trk system potassium transporter TrkA	NA	NA	NA	NA
WP_001063601.1\|452016_452865_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA
WP_000403170.1\|452879_453428_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA
WP_000693286.1\|453434_453692_+	hypothetical protein	NA	NA	NA	NA
WP_000656535.1\|453793_455476_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.5e-19	34.4
WP_050269833.1\|455460_456291_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000181373.1\|456483_456987_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_000185831.1\|457439_458003_+	ECF transporter S component	NA	NA	NA	NA
WP_000678709.1\|458016_458643_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_000867297.1\|458670_459060_+	hypothetical protein	NA	NA	NA	NA
WP_000333646.1\|459064_459514_+	N-acetyltransferase	NA	NA	NA	NA
WP_000418402.1\|459641_460229_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA
WP_000105241.1\|460618_462226_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.5e-141	47.0
WP_000026645.1\|462784_464416_-	Na/Pi cotransporter family protein	NA	NA	NA	NA
WP_000795208.1\|464720_469697_+	bacterial Ig-like domain-containing protein	NA	NA	NA	NA
WP_001096743.1\|469786_470983_+	phosphoglycerate kinase	NA	NA	NA	NA
WP_000119905.1\|471118_471646_+	aromatic acid exporter family protein	NA	NA	NA	NA
WP_000659549.1\|471722_472079_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001122901.1\|472115_473462_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
WP_001808898.1\|473557_473677_-	hypothetical protein	NA	NA	NA	NA
WP_000410531.1\|473641_473791_+	hypothetical protein	NA	NA	NA	NA
WP_000651177.1\|475578_476376_+	tyrosine-type DNA invertase PsrA	A0A0H4TI16	Erysipelothrix_phage	1.3e-21	28.7
WP_001155321.1\|478853_479807_+\|transposase	IS30-like element ISSpn8 family transposase	H7BWC8	unidentified_phage	1.6e-34	35.2
WP_000029049.1\|479809_481213_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_000229080.1\|481225_483559_-	DEAD/DEAH box helicase family protein	Q5YA94	Bacillus_phage	4.5e-25	27.9
WP_001088692.1\|484166_484676_+	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_000255781.1\|484839_485874_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_000046035.1\|485900_486425_+	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_000034662.1\|486904_488728_+	molecular chaperone DnaK	A0A0N9QXN8	Chrysochromulina_ericina_virus	1.3e-133	47.2
WP_000114422.1\|488729_489086_+	hypothetical protein	NA	NA	NA	NA
WP_001066305.1\|489487_490624_+	molecular chaperone DnaJ	E3T4P7	Cafeteria_roenbergensis_virus	1.3e-22	31.0
WP_001813906.1\|490945_491185_-	hypothetical protein	NA	NA	NA	NA
WP_000777760.1\|491346_491634_-	hypothetical protein	NA	NA	NA	NA
WP_001278301.1\|491643_492054_-	HIT family protein	B5LJ12	Mycobacterium_phage	3.4e-05	31.6
WP_000889923.1\|492121_492853_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	9.0e-25	28.6
WP_000653767.1\|492849_493899_+	ABC transporter permease	NA	NA	NA	NA
WP_000132575.1\|494066_494396_-	hypothetical protein	NA	NA	NA	NA
WP_000682133.1\|494671_495010_+	response regulator transcription factor	NA	NA	NA	NA
WP_001219122.1\|495014_495752_+	response regulator transcription factor	NA	NA	NA	NA
WP_000275285.1\|495764_497105_+	sensor histidine kinase	NA	NA	NA	NA
WP_000358814.1\|497149_497305_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA
WP_001069099.1\|497361_498723_-\|bacteriocin	bacteriocin secretion accessory protein	NA	NA	NA	NA
WP_000205152.1\|498733_500887_-	peptide cleavage/export ABC transporter BlpA	W8CYL7	Bacillus_phage	6.3e-42	27.9
WP_001093255.1\|501168_501423_+\|bacteriocin	two-peptide bacteriocin subunit BlpM	NA	NA	NA	NA
WP_001099490.1\|501438_501642_+\|bacteriocin	two-peptide bacteriocin subunit BlpN	NA	NA	NA	NA

DBSCAN-SWA_6

869786 : 879573

Streptococcus_phage(88.89%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075218898.1\|869786_870917_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-114	58.4
WP_000254686.1\|870926_872189_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	2.5e-139	64.5
WP_000689708.1\|872192_872990_+	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	2.7e-59	50.6
WP_000033362.1\|873105_873744_+	dTMP kinase	M1PSC7	Streptococcus_phage	9.8e-76	68.1
WP_000806712.1\|873740_874631_+	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	4.9e-73	51.7
WP_000358228.1\|874670_874988_+	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	2.9e-28	60.0
WP_001166880.1\|874990_875860_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.7e-116	76.1
WP_000760486.1\|876077_877133_+	DNA cytosine methyltransferase	M1PSQ0	Streptococcus_phage	2.1e-62	38.5
WP_000285316.1\|877135_878536_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000734158.1\|878532_879573_+	DNA (cytosine-5-)-methyltransferase	A7XXH6	Thermus_virus	1.6e-46	33.6

DBSCAN-SWA_7

1197884 : 1251659

Bacillus_phage(27.27%)

transposase,holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000811992.1\|1197884_1198688_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	5.3e-10	27.1
WP_001199652.1\|1198689_1199499_+\|holin	phosphorylcholine transferase LicD	A0A1V0SD50	Indivirus	9.1e-10	30.3
WP_001126425.1\|1199773_1202950_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA
WP_000166701.1\|1203262_1204342_-	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	6.3e-59	35.9
WP_001293836.1\|1204391_1205315_-	aspartate carbamoyltransferase catalytic subunit	M1HGA5	Paramecium_bursaria_Chlorella_virus	3.0e-25	31.7
WP_000850024.1\|1205333_1205855_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_000244451.1\|1206065_1206695_-	endonuclease III	NA	NA	NA	NA
WP_000773239.1\|1206694_1207237_-	DUF177 domain-containing protein	NA	NA	NA	NA
WP_000389600.1\|1207406_1207724_+	hypothetical protein	NA	NA	NA	NA
WP_000558899.1\|1207962_1209522_+	ABC-F family ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	2.1e-10	27.0
WP_000895736.1\|1209670_1210570_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_000219823.1\|1210571_1211132_-	LemA family protein	NA	NA	NA	NA
WP_000801941.1\|1211225_1211939_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_025171066.1\|1212241_1213525_+	uracil permease	Q9KX94	Enterobacteria_phage	2.3e-60	35.3
WP_000863628.1\|1213719_1215291_-	signal recognition particle protein	NA	NA	NA	NA
WP_000402066.1\|1215302_1215635_-	putative DNA-binding protein	NA	NA	NA	NA
WP_000701643.1\|1215725_1216103_-	DUF1934 domain-containing protein	NA	NA	NA	NA
WP_001003499.1\|1216174_1217479_+	HD domain-containing protein	E3T4P8	Cafeteria_roenbergensis_virus	1.7e-26	30.2
WP_000023508.1\|1217491_1218298_+	sugar-phosphatase	NA	NA	NA	NA
WP_001068669.1\|1218465_1218813_-	50S ribosomal protein L19	NA	NA	NA	NA
WP_000237420.1\|1218931_1219261_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	3.1e-09	37.0
WP_000712093.1\|1219254_1219629_-	fluoride efflux transporter CrcB	NA	NA	NA	NA
WP_000362440.1\|1219625_1219892_-	chorismate mutase	NA	NA	NA	NA
WP_001162128.1\|1220007_1220451_-	flavodoxin	NA	NA	NA	NA
WP_000401770.1\|1220554_1221490_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_001808393.1\|1221543_1221828_+	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000252103.1\|1221884_1222463_-	hypothetical protein	NA	NA	NA	NA
WP_000199575.1\|1224427_1225774_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_000711943.1\|1226269_1226440_-	hypothetical protein	NA	NA	NA	NA
WP_088785994.1\|1228108_1229155_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_000424226.1\|1229267_1229717_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA
WP_001000318.1\|1230222_1230678_-	HIT domain-containing protein	NA	NA	NA	NA
WP_000272432.1\|1230699_1232160_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_000239897.1\|1232219_1233797_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_001180441.1\|1233865_1235305_-	hypothetical protein	NA	NA	NA	NA
WP_000577773.1\|1235318_1236248_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_001071050.1\|1236258_1237191_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_000448317.1\|1237191_1237878_-	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA
WP_078101602.1\|1238593_1239352_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_001165928.1\|1239529_1240138_+	DUF624 domain-containing protein	NA	NA	NA	NA
WP_087671856.1\|1240372_1241724_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	6.5e-61	50.6
WP_000807141.1\|1242019_1242157_-	hypothetical protein	NA	NA	NA	NA
WP_000945302.1\|1242290_1243610_-	membrane protein	NA	NA	NA	NA
WP_000356590.1\|1243612_1244353_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.0e-09	30.8
WP_001108416.1\|1244367_1245975_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	6.6e-12	22.0
WP_001076600.1\|1245971_1247912_-	S9 family peptidase	NA	NA	NA	NA
WP_000386148.1\|1247944_1250554_-	lanthionine synthetase	NA	NA	NA	NA
WP_000807141.1\|1250732_1250870_-	hypothetical protein	NA	NA	NA	NA
WP_000821287.1\|1251071_1251659_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_8

1347249 : 1354256

Streptococcus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000929994.1\|1347249_1347966_-	CapA family protein	A0A0N9SJ77	Staphylococcus_phage	1.0e-25	30.7
WP_001272941.1\|1348478_1349090_+	peptide deformylase	E3SLL2	Synechococcus_phage	4.9e-16	42.4
WP_000855734.1\|1349134_1349863_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000272304.1\|1349901_1350813_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	1.0e-89	51.5
WP_000926600.1\|1350878_1351103_-	DUF4059 family protein	NA	NA	NA	NA
WP_000590984.1\|1351180_1351924_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.6e-29	41.0
WP_001103449.1\|1351923_1352724_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000889093.1\|1352881_1353238_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	1.2e-33	57.3
WP_001170348.1\|1353231_1353762_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.4e-46	55.6
WP_000405832.1\|1353761_1354256_-	GNAT family N-acetyltransferase	M1PSC3	Streptococcus_phage	1.9e-42	52.1

DBSCAN-SWA_9

1419200 : 1554566

159

Streptococcus_phage(91.85%)

integrase,head,tail,terminase,protease,tRNA,holin,portal,capsid

attL 1496397:1496456|attR 1546078:1546177

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000390784.1\|1419200_1419950_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_000689597.1\|1420003_1420363_-	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_000339024.1\|1420364_1421765_-	bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase	A0A1V0S9I2	Catovirus	2.7e-25	44.6
WP_000068664.1\|1422059_1422299_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_000609607.1\|1422330_1422801_-	single-stranded DNA-binding protein	A0A2H4J1H8	uncultured_Caudovirales_phage	2.4e-55	67.7
WP_001151785.1\|1422812_1423103_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_162489616.1\|1423255_1424602_-\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	3.7e-56	31.2
WP_000565234.1\|1424617_1424983_-	VOC family protein	NA	NA	NA	NA
WP_000777787.1\|1424975_1426163_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_000747254.1\|1426159_1426648_-	DUF5590 domain-containg protein	NA	NA	NA	NA
WP_000039618.1\|1426968_1427517_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_000682787.1\|1427753_1434506_-	G5 domain-containing protein	A0A2I2L3G6	Orpheovirus	2.0e-09	35.7
WP_001245197.1\|1434720_1436205_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000697775.1\|1436255_1436984_-	peroxide stress protein YaaA	A0A1X9I5I0	Streptococcus_phage	2.6e-40	39.0
WP_000508269.1\|1437062_1437227_-	YczI family protein	NA	NA	NA	NA
WP_000822876.1\|1437393_1438989_-	hypothetical protein	NA	NA	NA	NA
WP_000412224.1\|1439000_1439411_-	peptide deformylase	A0A2I7R224	Vibrio_phage	8.7e-09	31.4
WP_001277403.1\|1439526_1440318_-	glutathione-dependent disulfide-bond oxidoreductase	NA	NA	NA	NA
WP_000032465.1\|1440330_1443027_-	cation-translocating P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	1.1e-70	28.8
WP_000813910.1\|1443330_1444515_+	CDF family manganese efflux transporter MntE	NA	NA	NA	NA
WP_001279158.1\|1444657_1446529_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	3.9e-56	31.1
WP_001138818.1\|1446525_1447710_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	6.1e-39	32.6
WP_000027890.1\|1447721_1448489_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_000762059.1\|1448765_1449614_-	DegV family protein	NA	NA	NA	NA
WP_001050086.1\|1449615_1449990_-	DUF1149 family protein	NA	NA	NA	NA
WP_170835802.1\|1450063_1451416_-	phosphoglucosamine mutase	NA	NA	NA	NA
WP_000742290.1\|1451439_1452219_-	YbbR-like domain-containing protein	NA	NA	NA	NA
WP_001011058.1\|1452205_1453063_-	TIGR00159 family protein	NA	NA	NA	NA
WP_000080999.1\|1453198_1454167_+	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	4.8e-66	99.2
WP_000350500.1\|1454419_1455376_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1S5SF48	Streptococcus_phage	3.0e-145	100.0
WP_001186228.1\|1455379_1455712_-\|holin	phage holin	E8ZDJ3	Streptococcus_phage	3.3e-51	100.0
WP_001165342.1\|1455715_1456132_-\|holin	phage holin family protein	A0A1S5SES8	Streptococcus_phage	3.2e-67	100.0
WP_000852245.1\|1456141_1456492_-	hypothetical protein	X2KPI8	Streptococcus_phage	4.7e-64	100.0
WP_001091119.1\|1456494_1456698_-	hypothetical protein	X2KU40	Streptococcus_phage	1.1e-25	100.0
WP_000068025.1\|1464004_1464355_-	hypothetical protein	A0A141E1W7	Streptococcus_phage	8.9e-63	100.0
WP_000212181.1\|1464363_1467957_-	hypothetical protein	A0A1S5SEV9	Streptococcus_phage	0.0e+00	100.0
WP_000478016.1\|1467943_1468294_-	hypothetical protein	A0A1S5S814	Streptococcus_phage	1.2e-56	100.0
WP_001185639.1\|1468332_1468713_-	hypothetical protein	A0A1S5SF39	Streptococcus_phage	1.6e-65	100.0
WP_000880663.1\|1468717_1469131_-\|tail	tail protein	A0A1S5SF61	Streptococcus_phage	8.6e-73	100.0
WP_000608235.1\|1469133_1469502_-	hypothetical protein	A0A1S5SFB8	Streptococcus_phage	1.2e-65	100.0
WP_000015942.1\|1469498_1470014_-	HK97 gp10 family phage protein	A0A1S5S809	Streptococcus_phage	2.7e-92	100.0
WP_000478945.1\|1469988_1470327_-	hypothetical protein	A0A1S5S812	Streptococcus_phage	1.3e-55	100.0
WP_000021220.1\|1470307_1470619_-\|head,tail	phage head-tail adapter protein	A0A1S5SES7	Streptococcus_phage	2.5e-48	100.0
WP_000669347.1\|1470620_1470809_-	hypothetical protein	A0A1S5SF24	Streptococcus_phage	5.0e-28	100.0
WP_000863391.1\|1470818_1471844_-	sugar-binding protein	E8ZD37	Streptococcus_phage	6.6e-191	100.0
WP_001001556.1\|1471866_1472376_-	DUF4355 domain-containing protein	A0A141E1X5	Streptococcus_phage	6.2e-73	100.0
WP_000890165.1\|1472578_1472830_-	hypothetical protein	A0A1S5SEY8	Streptococcus_phage	1.2e-40	100.0
WP_000877353.1\|1472831_1473095_-	hypothetical protein	A0A1S5SF27	Streptococcus_phage	3.1e-44	100.0
WP_000565276.1\|1473137_1473551_-	HD domain-containing protein	A0A060QNR4	Streptococcus_phage	1.1e-67	100.0
WP_000651747.1\|1473547_1473757_-	hypothetical protein	A0A141E1P2	Streptococcus_phage	2.6e-33	100.0
WP_170835803.1\|1473758_1475396_-\|capsid	minor capsid protein	A0A1S5SES1	Streptococcus_phage	3.0e-302	100.0
WP_000285400.1\|1475304_1476774_-\|portal	phage portal protein	A0A1S5SEU5	Streptococcus_phage	7.8e-278	100.0
WP_000182319.1\|1476785_1478000_-\|terminase	PBSX family phage terminase large subunit	A0A1S5SES0	Streptococcus_phage	2.1e-236	100.0
WP_000351060.1\|1477989_1478484_-\|terminase	terminase small subunit	A0A1S5SF14	Streptococcus_phage	5.4e-82	100.0
WP_001165369.1\|1479840_1480269_-	transcriptional regulator	A0A141E173	Streptococcus_phage	1.0e-68	100.0
WP_001098945.1\|1480398_1480614_+	AbrB family transcriptional regulator	A0A1S5SET9	Streptococcus_phage	3.4e-33	100.0
WP_000125658.1\|1480597_1480951_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5SEX8	Streptococcus_phage	2.2e-61	100.0
WP_000612397.1\|1480971_1481457_-	hypothetical protein	A0A1S5SF10	Streptococcus_phage	1.8e-90	100.0
WP_001041160.1\|1481453_1482149_-	DUF1642 domain-containing protein	A0A1S5SF43	Streptococcus_phage	1.1e-136	100.0
WP_000391849.1\|1482150_1482465_-	hypothetical protein	A0A1S5SEP8	Streptococcus_phage	1.2e-58	100.0
WP_000119453.1\|1482615_1482954_-	hypothetical protein	A0A1S5SDI1	Streptococcus_phage	5.6e-62	100.0
WP_000122747.1\|1482953_1483106_-	hypothetical protein	A0A1S5SER0	Streptococcus_phage	4.7e-21	100.0
WP_000580032.1\|1483399_1484743_-	hypothetical protein	X2KU14	Streptococcus_phage	1.2e-256	100.0
WP_001838318.1\|1484745_1485567_-	bifunctional DNA primase/polymerase	A0A1S5SDK7	Streptococcus_phage	1.6e-158	100.0
WP_000054340.1\|1485739_1486246_-	hypothetical protein	A0A1S5SF71	Streptococcus_phage	1.6e-92	100.0
WP_000885997.1\|1486265_1487093_-	AAA family ATPase	X2KSX7	Streptococcus_phage	2.1e-150	100.0
WP_001044592.1\|1487092_1487410_-	hypothetical protein	X2KPG0	Streptococcus_phage	2.0e-53	100.0
WP_000028861.1\|1487428_1488622_-	hypothetical protein	A0A1S5SDG9	Streptococcus_phage	4.8e-233	100.0
WP_000696056.1\|1488584_1489070_-	hypothetical protein	X2KUD4	Streptococcus_phage	3.4e-89	100.0
WP_000422309.1\|1489069_1489429_-	hypothetical protein	X2L077	Streptococcus_phage	9.4e-60	100.0
WP_000157808.1\|1489428_1489911_-	siphovirus Gp157 family protein	A0A1S5SDH1	Streptococcus_phage	8.4e-80	100.0
WP_000544345.1\|1489903_1490626_-	HNH endonuclease	A0A1S5SEZ9	Streptococcus_phage	2.7e-138	100.0
WP_000252079.1\|1490639_1490870_-	hypothetical protein	A0A1S5SDN2	Streptococcus_phage	6.3e-33	100.0
WP_000189401.1\|1490870_1491212_-	hypothetical protein	A0A1S5SER9	Streptococcus_phage	3.2e-57	100.0
WP_000970850.1\|1491223_1491415_-	hypothetical protein	A0A1S5SDN5	Streptococcus_phage	2.3e-28	100.0
WP_001050924.1\|1491411_1491606_-	hypothetical protein	X2KSX0	Streptococcus_phage	1.8e-09	100.0
WP_000388508.1\|1491602_1491875_-	hypothetical protein	X2KPF2	Streptococcus_phage	5.1e-42	100.0
WP_000389583.1\|1491956_1492100_-	hypothetical protein	A0A1S5SEN0	Streptococcus_phage	7.9e-18	100.0
WP_000041096.1\|1492217_1492439_+	hypothetical protein	A0A1S5SEP2	Streptococcus_phage	9.6e-31	100.0
WP_001112859.1\|1492552_1492744_-	DNA-binding protein	A0A141DZR9	Streptococcus_phage	3.0e-28	100.0
WP_000142892.1\|1492808_1493048_+	hypothetical protein	A0A1S5SEZ4	Streptococcus_phage	3.6e-39	100.0
WP_000493110.1\|1493465_1493819_+	helix-turn-helix transcriptional regulator	A0A1S5SEQ8	Streptococcus_phage	3.2e-60	100.0
WP_000181886.1\|1493820_1494243_+	hypothetical protein	A0A1S5SEV0	Streptococcus_phage	4.5e-77	100.0
WP_001823580.1\|1494363_1494726_+	hypothetical protein	A0A1S5SEZ0	Streptococcus_phage	1.9e-23	99.2
WP_000151193.1\|1494746_1495127_+	ImmA/IrrE family metallo-endopeptidase	A0A1S5SF23	Streptococcus_phage	6.5e-67	100.0
WP_000266847.1\|1495268_1496396_+\|integrase	site-specific integrase	A0A1S5SEM0	Streptococcus_phage	4.5e-209	100.0
1496397:1496456	attL	NA	NA	NA	NA
WP_000350500.1\|1496701_1497658_-	N-acetylmuramoyl-L-alanine amidase family protein	A0A1S5SF48	Streptococcus_phage	3.0e-145	100.0
WP_001186228.1\|1497661_1497994_-\|holin	phage holin	E8ZDJ3	Streptococcus_phage	3.3e-51	100.0
WP_001165342.1\|1497997_1498414_-\|holin	phage holin family protein	A0A1S5SES8	Streptococcus_phage	3.2e-67	100.0
WP_000852245.1\|1498423_1498774_-	hypothetical protein	X2KPI8	Streptococcus_phage	4.7e-64	100.0
WP_001091119.1\|1498776_1498980_-	hypothetical protein	X2KU40	Streptococcus_phage	1.1e-25	100.0
WP_000068025.1\|1506286_1506637_-	hypothetical protein	A0A141E1W7	Streptococcus_phage	8.9e-63	100.0
WP_000212181.1\|1506645_1510239_-	hypothetical protein	A0A1S5SEV9	Streptococcus_phage	0.0e+00	100.0
WP_000478016.1\|1510225_1510576_-	hypothetical protein	A0A1S5S814	Streptococcus_phage	1.2e-56	100.0
WP_001185639.1\|1510614_1510995_-	hypothetical protein	A0A1S5SF39	Streptococcus_phage	1.6e-65	100.0
WP_000880663.1\|1510999_1511413_-\|tail	tail protein	A0A1S5SF61	Streptococcus_phage	8.6e-73	100.0
WP_000608235.1\|1511415_1511784_-	hypothetical protein	A0A1S5SFB8	Streptococcus_phage	1.2e-65	100.0
WP_000015942.1\|1511780_1512296_-	HK97 gp10 family phage protein	A0A1S5S809	Streptococcus_phage	2.7e-92	100.0
WP_000478945.1\|1512270_1512609_-	hypothetical protein	A0A1S5S812	Streptococcus_phage	1.3e-55	100.0
WP_000021220.1\|1512589_1512901_-\|head,tail	phage head-tail adapter protein	A0A1S5SES7	Streptococcus_phage	2.5e-48	100.0
WP_000669347.1\|1512902_1513091_-	hypothetical protein	A0A1S5SF24	Streptococcus_phage	5.0e-28	100.0
WP_000863391.1\|1513100_1514126_-	sugar-binding protein	E8ZD37	Streptococcus_phage	6.6e-191	100.0
WP_001001556.1\|1514148_1514658_-	DUF4355 domain-containing protein	A0A141E1X5	Streptococcus_phage	6.2e-73	100.0
WP_000890165.1\|1514860_1515112_-	hypothetical protein	A0A1S5SEY8	Streptococcus_phage	1.2e-40	100.0
WP_000877353.1\|1515113_1515377_-	hypothetical protein	A0A1S5SF27	Streptococcus_phage	3.1e-44	100.0
WP_000565276.1\|1515419_1515833_-	HD domain-containing protein	A0A060QNR4	Streptococcus_phage	1.1e-67	100.0
WP_000651747.1\|1515829_1516039_-	hypothetical protein	A0A141E1P2	Streptococcus_phage	2.6e-33	100.0
WP_170835803.1\|1516040_1517678_-\|capsid	minor capsid protein	A0A1S5SES1	Streptococcus_phage	3.0e-302	100.0
WP_000285400.1\|1517586_1519056_-\|portal	phage portal protein	A0A1S5SEU5	Streptococcus_phage	7.8e-278	100.0
WP_170835804.1\|1520314_1520764_-\|terminase	terminase small subunit	A0A1S5SF14	Streptococcus_phage	1.2e-72	100.0
WP_001001556.1\|1521549_1522059_-	DUF4355 domain-containing protein	A0A141E1X5	Streptococcus_phage	6.2e-73	100.0
WP_000890165.1\|1522260_1522512_-	hypothetical protein	A0A1S5SEY8	Streptococcus_phage	1.2e-40	100.0
WP_170835805.1\|1522828_1523233_-	GTP pyrophosphokinase	A0A060QNR4	Streptococcus_phage	4.6e-63	100.0
WP_170835803.1\|1523439_1525077_-\|capsid	minor capsid protein	A0A1S5SES1	Streptococcus_phage	3.0e-302	100.0
WP_000285400.1\|1524985_1526455_-\|portal	phage portal protein	A0A1S5SEU5	Streptococcus_phage	7.8e-278	100.0
WP_000182319.1\|1526466_1527681_-\|terminase	PBSX family phage terminase large subunit	A0A1S5SES0	Streptococcus_phage	2.1e-236	100.0
WP_000351060.1\|1527670_1528165_-\|terminase	terminase small subunit	A0A1S5SF14	Streptococcus_phage	5.4e-82	100.0
WP_001165369.1\|1529521_1529950_-	transcriptional regulator	A0A141E173	Streptococcus_phage	1.0e-68	100.0
WP_001098945.1\|1530079_1530295_+	AbrB family transcriptional regulator	A0A1S5SET9	Streptococcus_phage	3.4e-33	100.0
WP_000125658.1\|1530278_1530632_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5SEX8	Streptococcus_phage	2.2e-61	100.0
WP_000612397.1\|1530652_1531138_-	hypothetical protein	A0A1S5SF10	Streptococcus_phage	1.8e-90	100.0
WP_001041160.1\|1531134_1531830_-	DUF1642 domain-containing protein	A0A1S5SF43	Streptococcus_phage	1.1e-136	100.0
WP_000391849.1\|1531831_1532146_-	hypothetical protein	A0A1S5SEP8	Streptococcus_phage	1.2e-58	100.0
WP_000119453.1\|1532296_1532635_-	hypothetical protein	A0A1S5SDI1	Streptococcus_phage	5.6e-62	100.0
WP_000122747.1\|1532634_1532787_-	hypothetical protein	A0A1S5SER0	Streptococcus_phage	4.7e-21	100.0
WP_000580032.1\|1533080_1534424_-	hypothetical protein	X2KU14	Streptococcus_phage	1.2e-256	100.0
WP_001838318.1\|1534426_1535248_-	bifunctional DNA primase/polymerase	A0A1S5SDK7	Streptococcus_phage	1.6e-158	100.0
WP_000054340.1\|1535420_1535927_-	hypothetical protein	A0A1S5SF71	Streptococcus_phage	1.6e-92	100.0
WP_000885997.1\|1535946_1536774_-	AAA family ATPase	X2KSX7	Streptococcus_phage	2.1e-150	100.0
WP_001044592.1\|1536773_1537091_-	hypothetical protein	X2KPG0	Streptococcus_phage	2.0e-53	100.0
WP_000028861.1\|1537109_1538303_-	hypothetical protein	A0A1S5SDG9	Streptococcus_phage	4.8e-233	100.0
WP_000696056.1\|1538265_1538751_-	hypothetical protein	X2KUD4	Streptococcus_phage	3.4e-89	100.0
WP_000422309.1\|1538750_1539110_-	hypothetical protein	X2L077	Streptococcus_phage	9.4e-60	100.0
WP_000157808.1\|1539109_1539592_-	siphovirus Gp157 family protein	A0A1S5SDH1	Streptococcus_phage	8.4e-80	100.0
WP_000544345.1\|1539584_1540307_-	HNH endonuclease	A0A1S5SEZ9	Streptococcus_phage	2.7e-138	100.0
WP_000252079.1\|1540320_1540551_-	hypothetical protein	A0A1S5SDN2	Streptococcus_phage	6.3e-33	100.0
WP_000189401.1\|1540551_1540893_-	hypothetical protein	A0A1S5SER9	Streptococcus_phage	3.2e-57	100.0
WP_000970850.1\|1540904_1541096_-	hypothetical protein	A0A1S5SDN5	Streptococcus_phage	2.3e-28	100.0
WP_001050924.1\|1541092_1541287_-	hypothetical protein	X2KSX0	Streptococcus_phage	1.8e-09	100.0
WP_000388508.1\|1541283_1541556_-	hypothetical protein	X2KPF2	Streptococcus_phage	5.1e-42	100.0
WP_000389583.1\|1541637_1541781_-	hypothetical protein	A0A1S5SEN0	Streptococcus_phage	7.9e-18	100.0
WP_000041096.1\|1541898_1542120_+	hypothetical protein	A0A1S5SEP2	Streptococcus_phage	9.6e-31	100.0
WP_001112859.1\|1542233_1542425_-	DNA-binding protein	A0A141DZR9	Streptococcus_phage	3.0e-28	100.0
WP_000142892.1\|1542489_1542729_+	hypothetical protein	A0A1S5SEZ4	Streptococcus_phage	3.6e-39	100.0
WP_000493110.1\|1543146_1543500_+	helix-turn-helix transcriptional regulator	A0A1S5SEQ8	Streptococcus_phage	3.2e-60	100.0
WP_000181886.1\|1543501_1543924_+	hypothetical protein	A0A1S5SEV0	Streptococcus_phage	4.5e-77	100.0
WP_001823580.1\|1544044_1544407_+	hypothetical protein	A0A1S5SEZ0	Streptococcus_phage	1.9e-23	99.2
WP_000151193.1\|1544427_1544808_+	ImmA/IrrE family metallo-endopeptidase	A0A1S5SF23	Streptococcus_phage	6.5e-67	100.0
WP_000266847.1\|1544949_1546077_+\|integrase	site-specific integrase	A0A1S5SEM0	Streptococcus_phage	4.5e-209	100.0
WP_000011306.1\|1546164_1547076_-	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.5e-154	99.7
1546078:1546177	attR	NA	NA	NA	NA
WP_001231086.1\|1547072_1548050_-	YvcK family protein	A1IMD5	Streptococcus_phage	1.2e-184	100.0
WP_000163035.1\|1548046_1548937_-	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	6.7e-06	29.8
WP_001140412.1\|1548988_1549369_-	RidA family protein	NA	NA	NA	NA
WP_000422599.1\|1549379_1549967_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_000106346.1\|1549975_1551208_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-131	59.0
WP_000442275.1\|1551239_1551410_-	hypothetical protein	NA	NA	NA	NA
WP_000162440.1\|1551409_1551916_-	dihydrofolate reductase	G3MBI7	Bacillus_virus	3.0e-27	42.5
WP_000229868.1\|1552045_1552564_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_075270877.1\|1553060_1554566_-\|holin	choline binding-anchored murein hydrolase LytC	NA	NA	NA	NA

DBSCAN-SWA_10

1836191 : 1843523

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000167851.1\|1836191_1836893_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	9.2e-35	36.5
WP_000777235.1\|1837315_1838275_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	3.1e-57	40.8
WP_001193674.1\|1838264_1839221_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_000764303.1\|1839217_1839970_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.6e-14	28.1
WP_000858257.1\|1840065_1841031_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000821640.1\|1841255_1841498_-	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	1.3e-17	59.4
WP_001222228.1\|1841497_1842220_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000105310.1\|1842206_1842776_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	5.0e-15	34.9
WP_170835808.1\|1842794_1843523_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.9e-09	22.3

DBSCAN-SWA_11

2197631 : 2206385

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000510409.1\|2197631_2198471_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	8.8e-16	32.6
WP_000835722.1\|2198455_2199283_-	energy-coupling factor transporter ATPase	W8CYL7	Bacillus_phage	3.5e-17	33.3
WP_000712132.1\|2199279_2199825_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_001227958.1\|2199835_2200657_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000170228.1\|2200698_2201982_-	insulinase family protein	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	1.2e-16	29.5
WP_000424261.1\|2201978_2203229_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	6.0e-93	42.3
WP_000455898.1\|2203387_2203756_+	RNA-binding S4 domain-containing protein	A0A1X9I5V8	Streptococcus_phage	4.5e-17	56.0
WP_000266660.1\|2203758_2204856_+	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_000073428.1\|2204906_2206385_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.2e-94	40.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053210

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection