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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP053228 Blautia producta strain SCSK chromosome, complete genome 6 crisprs DinG,WYL,csa3,RT,DEDDh,cas3,cas5,cas8c,cas7,cas4,cas1,cas2 0 2 9 0

Results visualization

1. NZ_CP053228
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_1 350458-350555 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_2 660101-660187 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_3 2331314-2332153 Unclear NA
12 spacers
WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_4 3283534-3283670 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_5 3667909-3668006 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053228_6 4745230-4745921 TypeI NA
10 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP053228_5 5.1|3667943|30|NZ_CP053228|CRISPRCasFinder 3667943-3667972 30 NC_013857 Azospirillum sp. B510 plasmid pAB510c, complete sequence 136692-136721 7 0.767
NZ_CP053228_3 3.8|2331820|34|NZ_CP053228|CRISPRCasFinder,CRT,PILER-CR 2331820-2331853 34 NZ_CP035002 Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence 488992-489025 10 0.706

1. spacer 5.1|3667943|30|NZ_CP053228|CRISPRCasFinder matches to NC_013857 (Azospirillum sp. B510 plasmid pAB510c, complete sequence) position: , mismatch: 7, identity: 0.767

cggtatccatgagccgtgggcctccggcat	CRISPR spacer
cctggtccatgagccgtcggccgccggcaa	Protospacer
*   .************ **** ****** 

2. spacer 3.8|2331820|34|NZ_CP053228|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 10, identity: 0.706

tttttatggcgaaatccgtttaccaaatcaagat	CRISPR spacer
ggcctgtcgcgaaatccgttgaccacatcaagcg	Protospacer
  ..*.* ************ **** ******  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 289029 : 331675 46 uncultured_Caudovirales_phage(16.67%) tail,portal,tRNA,protease,terminase,integrase,capsid attL 281382:281399|attR 322554:322571
DBSCAN-SWA_2 1284468 : 1371648 94 Clostridium_phage(10.71%) tail,portal,holin,tRNA,protease,terminase,transposase,capsid NA
DBSCAN-SWA_3 2044264 : 2082491 49 Clostridium_phage(40.0%) tail,portal,holin,terminase,integrase,head,coat attL 2042039:2042066|attR 2082509:2082536
DBSCAN-SWA_4 2488579 : 2549938 60 Erysipelothrix_phage(33.33%) tail,portal,holin,tRNA,protease,terminase,head,capsid NA
DBSCAN-SWA_5 3200537 : 3238839 55 Clostridium_phage(39.13%) holin,terminase,transposase,integrase,capsid attL 3201065:3201111|attR 3242034:3242080
DBSCAN-SWA_6 3953670 : 3971295 20 Streptococcus_phage(88.24%) integrase attL 3949541:3949555|attR 3959042:3959056
DBSCAN-SWA_7 4002762 : 4064656 60 Clostridium_phage(41.67%) holin,tRNA,terminase,integrase,capsid attL 4026878:4026924|attR 4068077:4068123
DBSCAN-SWA_8 4413164 : 4421961 7 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_9 5457497 : 5468705 12 Erysipelothrix_phage(55.56%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage