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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP053472 Staphylococcus warneri strain WB224 plasmid pWB224_2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053476 Staphylococcus warneri strain WB224 plasmid pWB224_6, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053475 Staphylococcus warneri strain WB224 plasmid pWB224_5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053473 Staphylococcus warneri strain WB224 plasmid pWB224_3, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053471 Staphylococcus warneri strain WB224 plasmid pWB224_1, complete sequence 0 crisprs csa3 0 0 0 0
NZ_CP053474 Staphylococcus warneri strain WB224 plasmid pWB224_4, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP053477 Staphylococcus warneri strain WB224 chromosome, complete genome 5 crisprs cas9,cas1,cas2,WYL,csa3,cas14j,DEDDh,cas3,DinG 1 6 8 0

Results visualization

1. NZ_CP053477
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053477_1 332360-332725 orTypeII NA
5 spacers
cas9,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053477_2 338399-338896 orTypeII NA
7 spacers
cas2,cas1,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053477_3 375654-375736 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053477_4 784519-784605 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053477_5 1682652-1682747 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP053477_5 5.1|1682686|28|NZ_CP053477|CRISPRCasFinder 1682686-1682713 28 NZ_CP053477.1 1682564-1682591 2 0.929

1. spacer 5.1|1682686|28|NZ_CP053477|CRISPRCasFinder matches to position: 1682564-1682591, mismatch: 2, identity: 0.929

ttttaactgaatagtggctcttatgcaa	CRISPR spacer
tttcaaatgaatagtggctcttatgcaa	Protospacer
***.** *********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 AP013811 Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, *** SEQUENCING IN PROGRESS *** 1367-1396 5 0.833
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 JX519263 Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence 5766-5795 5 0.833
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 KT878766 Staphylococcus phage P1105, complete genome 22115-22144 5 0.833
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 MH384261 Staphylococcus phage SA137ruMSSAST121PVL, complete genome 43122-43151 5 0.833
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 NC_025460 Staphylococcus phage phiSa119, complete genome 39609-39638 5 0.833
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 AY954956 Bacteriophage 3A, complete genome 23244-23273 5 0.833
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 NC_007053 Staphylococcus phage 3A, complete genome 23244-23273 5 0.833
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP009640 Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence 13136-13165 5 0.833
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP053961 Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence 46969-46998 5 0.833
NZ_CP053477_1 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332462-332491 30 NZ_CP017949 Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence 82917-82946 6 0.8
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 MH992183 Apis mellifera associated microvirus 33 isolate INH_SP_169, complete genome 3086-3115 6 0.8
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MT833282 Escherichia coli phage vB_EcoM_Shy, complete genome 82694-82723 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 LC473039 Escherichia phage L27 DNA, complete genome 6498-6527 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_005282 Enterobacteria phage Felix 01, complete genome 79563-79592 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 JF461087 Salmonella phage FO1a, complete genome 79461-79490 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK482690 Escherichia phage vB_EcoM_LMP34, partial genome 70812-70841 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK482689 Escherichia phage vB_EcoM_LMP33, complete genome 41804-41833 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN994499 Phage NBEco005, complete genome 66179-66208 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KC139638 Salmonella phage FSL SP-107 thymidylate synthase, dihydrofolate reductase, hypothetical proteins, putative transcriptional regulatory protein, hypothetical proteins, ATP-dependent DNA ligase, hypothetical proteins, putative DNA polymerase, endonuclease, putative DNA polymerase, hypothetical proteins, putative deoxynucleotide monophosphate kinase, hypothetical protein, putative phage DNA primase/helicase, hypothetical proteins, putative exodeoxyribonuclease, NAD synthetase, hypothetical proteins, ribonucleoside triphosphate reductase, alpha chain, hypothetical protein, ribonucleoside triphosphate reductase, beta chain, putative glutaredoxin, hypothetical protein, ribonucleotide reductase of class III, hypothetical proteins, ribonucleotide reductase of class III, hypothetical proteins, putative ribose-phosphate pyrophosphokinase, nicotinamide phosphoribosyl transferase, hypothetical proteins, rIIA protein, rIIB protein, hypothetical protein, putative PseT polynucleotide 5'-kinase/3'-phosphatase, and hypothetical proteins genes, complete cds 26818-26847 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MG646671 Salmonella phage BPS17S6, complete genome 66066-66095 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MG065668 UNVERIFIED: Campylobacter phage A126, complete genome 28115-28144 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN994503 Phage NBSal004, complete genome 66032-66061 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MH571750 Escherichia phage vB_EcoM-Ro111lw, complete genome 65652-65681 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 LR699048 Escherichia phage VpaE1_ev035 genome assembly, chromosome: 1 81764-81793 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK965970 Salmonella phage DaR-2019b isolate 6717_4FA, complete genome 50856-50885 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 LR597663 Escherichia phage VpaE1_ev78 genome assembly, chromosome: 1 81257-81286 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MT446388 UNVERIFIED: Escherichia virus TH10, complete genome 74759-74788 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850637 Escherichia phage warpig, complete genome 22675-22704 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850635 Escherichia phage bumzen, complete genome 58542-58571 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850564 Escherichia phage humlepung, complete genome 64947-64976 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK524176 Escherichia phage PHB11, complete genome 66016-66045 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 AF320576 Bacteriophage Felix 01, complete genome 79563-79592 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 JX560968 Escherichia phage EC6, complete genome 67575-67604 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_028872 Escherichia phage HY02, complete genome 80399-80428 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN882542 Escherichia phage JN01,complete genome 1402-1431 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MG065664 UNVERIFIED: Campylobacter phage A132, complete genome 54599-54628 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK965969 Salmonella phage DaR-2019a isolate 6712_28b, complete genome 51554-51583 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_031939 Salmonella phage BPS15Q2, complete genome 67975-68004 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MG646670 Salmonella phage BPS15S6, complete genome 55974-56003 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 GU169904 Staphylococcus phage SA1, complete genome 114043-114072 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850566 Escherichia phage garuso, complete genome 28386-28415 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 LR597658 Escherichia phage VpaE1_ev108 genome assembly, chromosome: 1 81425-81454 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KP010413 Salmonella phage vB_SPuM_SP116, complete genome 81413-81442 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KT184316 Enterobacteria phage XTG1, complete genome 55930-55959 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_027337 Escherichia phage vB_EcoM-VpaE1, complete genome 81644-81673 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850644 Escherichia phage ekra, complete genome 21648-21677 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850636 Escherichia phage dune, complete genome 22370-22399 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN655999 Shigella phage Z31, complete genome 23509-23538 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850577 Escherichia phage heid, complete genome 44520-44549 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850585 Escherichia phage skuden, complete genome 311-340 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MT322327 UNVERIFIED: Escherichia phage SSBS18_WS_10_728, complete genome 59669-59698 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850631 Escherichia phage mio, complete genome 22623-22652 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850639 Escherichia phage radambza, complete genome 74304-74333 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MG646669 Salmonella phage BPS17W1, complete genome 20708-20737 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MK482688 Escherichia phage vB_EcoM_LMP25, complete genome 23420-23449 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KF055347 Escherichia phage JH2, complete genome 18386-18415 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_042096 Salmonella phage BPS17L1, complete genome 18910-18939 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NC_027360 Enterobacteriaphage UAB_Phi87, complete genome 36231-36260 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN227145 Salmonella phage BPSELC-1, complete genome 59711-59740 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850633 Escherichia phage allfine, complete genome 66606-66635 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850619 Escherichia phage finno, complete genome 40628-40657 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KT184313 Enterobacteria phage KhF1, complete genome 14210-14239 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KT184315 Enterobacteria phage KhF3, complete genome 64683-64712 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN481367 Salmonella phage D1-2, complete genome 19768-19797 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MH586731 Salmonella phage Meda, complete genome 9078-9107 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 KT184314 Enterobacteria phage KhF2, complete genome 37321-37350 7 0.767
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 MN850647 Escherichia phage tootiki, complete genome 76516-76545 7 0.767
NZ_CP053477_1 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332462-332491 30 NC_005909 Pseudomonas alcaligenes plasmid pRA2, complete sequence 3685-3714 7 0.767
NZ_CP053477_1 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332462-332491 30 MH617606 Microviridae sp. isolate ctgi760, complete genome 1821-1850 7 0.767
NZ_CP053477_1 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332462-332491 30 MK064565 Sulfolobales Beppu rod-shaped virus 1 clone D, complete genome 11153-11182 7 0.767
NZ_CP053477_1 1.5|332660|30|NZ_CP053477|CRISPRCasFinder,CRT 332660-332689 30 MN692980 Marine virus AFVG_117M21, complete genome 5260-5289 7 0.767
NZ_CP053477_2 2.6|338765|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338765-338794 30 NZ_CP030933 Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence 826096-826125 7 0.767
NZ_CP053477_1 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332462-332491 30 NZ_CP013615 Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence 308937-308966 8 0.733
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 NZ_CP038617 Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence 102835-102864 8 0.733
NZ_CP053477_2 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338699-338728 30 NZ_CP020456 Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY2, complete sequence 50581-50610 8 0.733
NZ_CP053477_2 2.6|338765|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 338765-338794 30 NZ_CP016898 Acinetobacter soli strain GFJ2 plasmid pGFJ2, complete sequence 74939-74968 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024110 Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence 30876-30905 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP020005 Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence 191362-191391 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024106 Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence 45638-45667 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024118 Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence 40730-40759 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024103 Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence 15820-15849 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024108 Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence 74225-74254 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024100 Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence 53527-53556 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024122 Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence 57500-57529 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024115 Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence 61190-61219 8 0.733
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 NZ_CP024097 Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence 78385-78414 8 0.733
NZ_CP053477_1 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT 332396-332425 30 NZ_AP019635 Enterobacter sp. 18A13 plasmid pECC18A13-1, complete sequence 38640-38669 9 0.7
NZ_CP053477_2 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT 338831-338860 30 MN692989 Marine virus AFVG_117M66, complete genome 12965-12994 9 0.7

1. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to AP013811 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S36-C173, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 5, identity: 0.833

-tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
gtggt-aaatggagttatggtcatcattgct	Protospacer
 **** *******.************ **. 

2. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to JX519263 (Uncultured Mediterranean phage MEDS1 group fosmid MedDCM-OCT-S13-C2, complete sequence) position: , mismatch: 5, identity: 0.833

-tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
gtggt-aaatggagttatggtcatcattgct	Protospacer
 **** *******.************ **. 

3. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KT878766 (Staphylococcus phage P1105, complete genome) position: , mismatch: 5, identity: 0.833

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gaattaggttttatcactaataaaaatgat	Protospacer
********.***********.**** .**.

4. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MH384261 (Staphylococcus phage SA137ruMSSAST121PVL, complete genome) position: , mismatch: 5, identity: 0.833

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gaattaggttttatcactaataaaaatgat	Protospacer
********.***********.**** .**.

5. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_025460 (Staphylococcus phage phiSa119, complete genome) position: , mismatch: 5, identity: 0.833

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gaattaggttttatcactaataaaaatgat	Protospacer
********.***********.**** .**.

6. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to AY954956 (Bacteriophage 3A, complete genome) position: , mismatch: 5, identity: 0.833

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gaattaggttttatcactaataaaaatgat	Protospacer
********.***********.**** .**.

7. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_007053 (Staphylococcus phage 3A, complete genome) position: , mismatch: 5, identity: 0.833

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gaattaggttttatcactaataaaaatgat	Protospacer
********.***********.**** .**.

8. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP009640 (Bacillus cereus 03BB108 plasmid pBFI_3, complete sequence) position: , mismatch: 5, identity: 0.833

ctgaggc-agaaattaataaaatgcagcaat	CRISPR spacer
-tgatacaagaaattaataagatgcagcaag	Protospacer
 *** .* ************.********* 

9. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP053961 (Bacillus cereus strain FDAARGOS_802 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

ctgaggc-agaaattaataaaatgcagcaat	CRISPR spacer
-tgatacaagaaattaataagatgcagcaag	Protospacer
 *** .* ************.********* 

10. spacer 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017949 (Tenericutes bacterium MO-XQ plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

accactacctgatttctttaagttttcagc	CRISPR spacer
atcaagccctaatttctttaggttttcagc	Protospacer
*.**   ***.*********.*********

11. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to MH992183 (Apis mellifera associated microvirus 33 isolate INH_SP_169, complete genome) position: , mismatch: 6, identity: 0.8

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
ctgaggaagaaatcaataaaatgaaaaaag	Protospacer
****** ******.********* *. ** 

12. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MT833282 (Escherichia coli phage vB_EcoM_Shy, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

13. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to LC473039 (Escherichia phage L27 DNA, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggacttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

14. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_005282 (Enterobacteria phage Felix 01, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggacttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

15. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to JF461087 (Salmonella phage FO1a, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggacttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

16. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK482690 (Escherichia phage vB_EcoM_LMP34, partial genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

17. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK482689 (Escherichia phage vB_EcoM_LMP33, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

18. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN994499 (Phage NBEco005, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

19. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KC139638 (Salmonella phage FSL SP-107 thymidylate synthase, dihydrofolate reductase, hypothetical proteins, putative transcriptional regulatory protein, hypothetical proteins, ATP-dependent DNA ligase, hypothetical proteins, putative DNA polymerase, endonuclease, putative DNA polymerase, hypothetical proteins, putative deoxynucleotide monophosphate kinase, hypothetical protein, putative phage DNA primase/helicase, hypothetical proteins, putative exodeoxyribonuclease, NAD synthetase, hypothetical proteins, ribonucleoside triphosphate reductase, alpha chain, hypothetical protein, ribonucleoside triphosphate reductase, beta chain, putative glutaredoxin, hypothetical protein, ribonucleotide reductase of class III, hypothetical proteins, ribonucleotide reductase of class III, hypothetical proteins, putative ribose-phosphate pyrophosphokinase, nicotinamide phosphoribosyl transferase, hypothetical proteins, rIIA protein, rIIB protein, hypothetical protein, putative PseT polynucleotide 5'-kinase/3'-phosphatase, and hypothetical proteins genes, complete cds) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

20. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MG646671 (Salmonella phage BPS17S6, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

21. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MG065668 (UNVERIFIED: Campylobacter phage A126, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

22. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN994503 (Phage NBSal004, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

23. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MH571750 (Escherichia phage vB_EcoM-Ro111lw, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

24. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to LR699048 (Escherichia phage VpaE1_ev035 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

25. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK965970 (Salmonella phage DaR-2019b isolate 6717_4FA, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

26. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to LR597663 (Escherichia phage VpaE1_ev78 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

27. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MT446388 (UNVERIFIED: Escherichia virus TH10, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

28. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850637 (Escherichia phage warpig, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

29. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850635 (Escherichia phage bumzen, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

30. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850564 (Escherichia phage humlepung, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

31. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK524176 (Escherichia phage PHB11, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

32. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to AF320576 (Bacteriophage Felix 01, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggacttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

33. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to JX560968 (Escherichia phage EC6, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

34. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_028872 (Escherichia phage HY02, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

35. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN882542 (Escherichia phage JN01,complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

36. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MG065664 (UNVERIFIED: Campylobacter phage A132, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

37. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK965969 (Salmonella phage DaR-2019a isolate 6712_28b, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

38. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_031939 (Salmonella phage BPS15Q2, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

39. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MG646670 (Salmonella phage BPS15S6, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

40. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to GU169904 (Staphylococcus phage SA1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

41. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850566 (Escherichia phage garuso, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

42. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to LR597658 (Escherichia phage VpaE1_ev108 genome assembly, chromosome: 1) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

43. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KP010413 (Salmonella phage vB_SPuM_SP116, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

44. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KT184316 (Enterobacteria phage XTG1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

45. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_027337 (Escherichia phage vB_EcoM-VpaE1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

46. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850644 (Escherichia phage ekra, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

47. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850636 (Escherichia phage dune, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

48. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN655999 (Shigella phage Z31, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

49. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850577 (Escherichia phage heid, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

50. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850585 (Escherichia phage skuden, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

51. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MT322327 (UNVERIFIED: Escherichia phage SSBS18_WS_10_728, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

52. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850631 (Escherichia phage mio, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

53. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850639 (Escherichia phage radambza, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

54. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MG646669 (Salmonella phage BPS17W1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

55. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK482688 (Escherichia phage vB_EcoM_LMP25, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

56. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KF055347 (Escherichia phage JH2, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

57. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_042096 (Salmonella phage BPS17L1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

58. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_027360 (Enterobacteriaphage UAB_Phi87, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

59. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN227145 (Salmonella phage BPSELC-1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

60. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850633 (Escherichia phage allfine, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgtttcaa	Protospacer
******.***** **********   *  *

61. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850619 (Escherichia phage finno, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

62. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KT184313 (Enterobacteria phage KhF1, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

63. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KT184315 (Enterobacteria phage KhF3, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

64. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN481367 (Salmonella phage D1-2, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggacaaatggatttatggtcatgcttcaa	Protospacer
*** ******** **********   *  *

65. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MH586731 (Salmonella phage Meda, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

66. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to KT184314 (Enterobacteria phage KhF2, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

67. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MN850647 (Escherichia phage tootiki, complete genome) position: , mismatch: 7, identity: 0.767

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
tggtcagatggatttatggtcatgcttcaa	Protospacer
******.***** **********   *  *

68. spacer 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NC_005909 (Pseudomonas alcaligenes plasmid pRA2, complete sequence) position: , mismatch: 7, identity: 0.767

accactacctgatttctttaagttttcagc	CRISPR spacer
cgcacttcctgatttcattaagtttttcga	Protospacer
  **** ********* *********. * 

69. spacer 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MH617606 (Microviridae sp. isolate ctgi760, complete genome) position: , mismatch: 7, identity: 0.767

accactacctgatttctttaagttttcagc	CRISPR spacer
atttatacctgctttctttaagtcttcaac	Protospacer
*..  ****** ***********.****.*

70. spacer 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to MK064565 (Sulfolobales Beppu rod-shaped virus 1 clone D, complete genome) position: , mismatch: 7, identity: 0.767

accactacctgatttctttaagttttcagc	CRISPR spacer
agctttagctaatttctttaagttttcact	Protospacer
* * .** **.***************** .

71. spacer 1.5|332660|30|NZ_CP053477|CRISPRCasFinder,CRT matches to MN692980 (Marine virus AFVG_117M21, complete genome) position: , mismatch: 7, identity: 0.767

tgaataagaaagcattcctaagccagtatt	CRISPR spacer
tataaaagaaagcattccaaagcccgtagg	Protospacer
*. * ************* ***** ***  

72. spacer 2.6|338765|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030933 (Enterococcus gilvus strain CR1 plasmid pCR1A, complete sequence) position: , mismatch: 7, identity: 0.767

cagaagttcttgattcaatggatgagttag	CRISPR spacer
gatatgggcttgattcaatggatgagctat	Protospacer
 * * *  ******************.** 

73. spacer 1.2|332462|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 8, identity: 0.733

accactacctgatttctttaagttttcagc	CRISPR spacer
gattttacctgaattctttaaattttcatc	Protospacer
. . .******* ********.****** *

74. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 8, identity: 0.733

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
gttataggttttatcactaccaaaacccga	Protospacer
*   ****.********** ******* . 

75. spacer 2.5|338699|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020456 (Vibrio coralliilyticus strain SNUTY-1 plasmid pSNUTY2, complete sequence) position: , mismatch: 8, identity: 0.733

gaattaggctttatcactaacaaaaccgac	CRISPR spacer
atgtttttatttatcactaacaacaccgac	Protospacer
. .**    ************** ******

76. spacer 2.6|338765|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016898 (Acinetobacter soli strain GFJ2 plasmid pGFJ2, complete sequence) position: , mismatch: 8, identity: 0.733

cagaagttcttgattcaatggatgagttag	CRISPR spacer
atacattaattgatttaatggatgagttag	Protospacer
  . * *  ******.**************

77. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024110 (Bacillus cytotoxicus strain CH_13 plasmid pCh13_79, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

78. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP020005 (Bacillus thuringiensis strain Bacillus thuringiensis L-7601 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

79. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024106 (Bacillus cytotoxicus strain CH_23 plasmid pCh23_67, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

80. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024118 (Bacillus cytotoxicus strain CH_2 plasmid pCh2_83, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

81. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024103 (Bacillus cytotoxicus strain CH_25 plasmid pCh25_67, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

82. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024108 (Bacillus cytotoxicus strain CH_15 plasmid pCh15_83, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

83. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024100 (Bacillus cytotoxicus strain CH_38 plasmid pCh38_83, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

84. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024122 (Bacillus cytotoxicus strain CH_1 plasmid pCh1_67, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

85. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024115 (Bacillus cytotoxicus strain CH_3 plasmid pCh3_83, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

86. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to NZ_CP024097 (Bacillus cytotoxicus strain CH_39 plasmid pCh39_83, complete sequence) position: , mismatch: 8, identity: 0.733

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
tgatagaagaaattaataagatgcagcaag	Protospacer
. . .* ************.********* 

87. spacer 1.1|332396|30|NZ_CP053477|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP019635 (Enterobacter sp. 18A13 plasmid pECC18A13-1, complete sequence) position: , mismatch: 9, identity: 0.7

tggtcaaatggaattatggtcatcagtgta	CRISPR spacer
ctaatggatggtattatggtcatcagcgta	Protospacer
. . ...**** **************.***

88. spacer 2.7|338831|30|NZ_CP053477|CRISPRCasFinder,CRT matches to MN692989 (Marine virus AFVG_117M66, complete genome) position: , mismatch: 9, identity: 0.7

ctgaggcagaaattaataaaatgcagcaat	CRISPR spacer
gaattgcagaaattaataatatgcagggct	Protospacer
  .  ************** ****** . *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 127113 : 142720 22 Staphylococcus_phage(77.78%) terminase,transposase,integrase attL 127696:127710|attR 138143:138157
DBSCAN-SWA_2 1109370 : 1156331 45 Staphylococcus_phage(38.46%) transposase,tRNA,protease,integrase attL 1124125:1124184|attR 1155058:1156381
DBSCAN-SWA_3 1266752 : 1291821 28 Staphylococcus_phage(95.65%) NA NA
DBSCAN-SWA_4 1428023 : 1437048 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_5 1999954 : 2008424 9 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_6 2182746 : 2196276 18 Staphylococcus_phage(73.33%) terminase,integrase attL 2185388:2185402|attR 2193274:2193288
DBSCAN-SWA_7 2247722 : 2259476 10 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_8 2272488 : 2279432 8 Pandoravirus(14.29%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage