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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP033365 Mesorhizobium sp. NZP2298 chromosome, complete genome 5 crisprs csa3,DEDDh,WYL,cas3 1 0 3 0

Results visualization

1. NZ_CP033365
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033365_1 1995374-1995598 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033365_2 4106965-4107131 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033365_3 4178374-4178467 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033365_4 4716123-4716211 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP033365_5 5030046-5030161 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP033365_2 2.1|4107024|19|NZ_CP033365|PILER-CR 4107024-4107042 19 NZ_CP033365.1 4107588-4107606 0 1.0
NZ_CP033365_2 2.1|4107024|19|NZ_CP033365|PILER-CR 4107024-4107042 19 NZ_CP033365.1 4107132-4107150 1 0.947
NZ_CP033365_2 2.1|4107024|19|NZ_CP033365|PILER-CR 4107024-4107042 19 NZ_CP033365.1 4107870-4107888 2 0.895

1. spacer 2.1|4107024|19|NZ_CP033365|PILER-CR matches to position: 4107588-4107606, mismatch: 0, identity: 1.0

ccagaccatcgatgctgga	CRISPR spacer
ccagaccatcgatgctgga	Protospacer
*******************

2. spacer 2.1|4107024|19|NZ_CP033365|PILER-CR matches to position: 4107132-4107150, mismatch: 1, identity: 0.947

ccagaccatcgatgctgga	CRISPR spacer
ccaggccatcgatgctgga	Protospacer
****.**************

3. spacer 2.1|4107024|19|NZ_CP033365|PILER-CR matches to position: 4107870-4107888, mismatch: 2, identity: 0.895

ccagaccatcgatgctgga	CRISPR spacer
ccaggccgtcgatgctgga	Protospacer
****.**.***********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 3887369 : 3895673 9 uncultured_Mediterranean_phage(85.71%) tRNA NA
DBSCAN-SWA_2 6780877 : 6843988 57 Staphylococcus_phage(15.38%) transposase,protease,holin NA
DBSCAN-SWA_3 7251108 : 7297547 60 Rhizobium_phage(27.27%) portal,head,integrase,terminase,capsid,tail attL 7291154:7291169|attR 7308395:7308410
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage