CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP033368	Mesorhizobium loti strain SU343 chromosome, complete genome	3 crisprs	WYL,csa3,DEDDh,RT,cas3	1	6
NZ_CP033370	Mesorhizobium loti strain SU343 plasmid pMLSU343b, complete sequence	0 crisprs	NA	0	0
NZ_CP033369	Mesorhizobium loti strain SU343 plasmid pMLSU343a, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP033368_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033368_1

3316637-3316716

Orphan

Consensus_repeat	Method
TCCCCTGAAAATGCGCAGCATTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP033368_1

>merge|NZ_CP033368|1|3316637-3316716|CRISPRCasFinder
TCCCCTGAAAATGCGCAGCATTTTTCGACTCATGGAGATCACGAGGTGGCAGGGGGCTCCTCTGAAAATGCGCAGCATTT

>NZ_CP033368|1|1|3316637-3316716|CRISPRCasFinder
TCCCCTGAAAATGCGCAGCATTT	TTCGACTCATGGAGATCACGAGGTGGCAGGGGGC
TCCTCTGAAAATGCGCAGCATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033368.1\|WP_064985841.1\|3312385_3312805_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985830.1\|3318039_3318342_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985833.1\|3317387_3317981_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985846.1\|3311111_3311708_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985816.1\|3325243_3326377_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP033368.1\|WP_019859568.1\|3313279_3313984_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225484
NZ_CP033368.1\|WP_038648300.1\|3310533_3311115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_081296214.1\|3322030_3322858_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP033368.1\|WP_064985825.1\|3320643_3321141_-\|DUF2306-domain-containing-protein	unknown	unknown	gnl\|CDD\|227683
NZ_CP033368.1\|WP_064985844.1\|3311704_3312286_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985839.1\|3314572_3315250_+\|GcrA-cell-cycle-regulator	unknown	unknown	gnl\|CDD\|227655
NZ_CP033368.1\|WP_064985828.1\|3318534_3320505_-\|acyltransferase	unknown	unknown	gnl\|CDD\|224748
NZ_CP033368.1\|WP_081296213.1\|3324147_3325200_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270307
NZ_CP033368.1\|WP_019859569.1\|3312921_3313224_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_032921203.1\|3315449_3315767_-\|DUF982-domain-containing-protein	unknown	unknown	gnl\|CDD\|368772
NZ_CP033368.1\|WP_064985822.1\|3321276_3321582_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377738
NZ_CP033368.1\|WP_019859563.1\|3315851_3316133_-\|DUF982-domain-containing-protein	unknown	unknown	gnl\|CDD\|368772
NZ_CP033368.1\|WP_064985848.1\|3309068_3310334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064985820.1\|3322860_3324141_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP033368.1\|WP_147377521.1\|3316835_3317213_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP033368.1\|WP_064985839.1\|3314572_3315250_+\|GcrA-cell-cycle-regulator	gnl\|CDD\|227655	COG5352, COG5352, Uncharacterized protein conserved in bacteria [Function unknown].	0.000434044
NZ_CP033368.1\|WP_064985828.1\|3318534_3320505_-\|acyltransferase	gnl\|CDD\|224748	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism].	4.81435e-62
NZ_CP033368.1\|WP_081296213.1\|3324147_3325200_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270307	cd13589, PBP2_polyamine_RpCGA009, The periplasmic-binding component of an uncharacterized ABC transport system from Rhodopseudomonas palustris CGA009 and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic binding domain that serves as the primary high-affinity receptor of an uncharacterized ABC-type polyamine transporter from Rhodopseudomonas palustris Cga009 and related proteins from other bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	5.44479e-88
NZ_CP033368.1\|WP_064985816.1\|3325243_3326377_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.47027e-159
NZ_CP033368.1\|WP_019859568.1\|3313279_3313984_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225484	COG2932, COG2932, Predicted transcriptional regulator [Transcription].	1.97033e-33
NZ_CP033368.1\|WP_032921203.1\|3315449_3315767_-\|DUF982-domain-containing-protein	gnl\|CDD\|368772	pfam06169, DUF982, Protein of unknown function (DUF982). This family consists of several hypothetical proteins from Rhizobium meliloti, Rhizobium loti and Agrobacterium tumefaciens. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	4.70587e-15
NZ_CP033368.1\|WP_064985822.1\|3321276_3321582_-\|hypothetical-protein	gnl\|CDD\|377738	pfam06945, DUF1289, Protein of unknown function (DUF1289). This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N-terminus. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	0.00259942
NZ_CP033368.1\|WP_019859563.1\|3315851_3316133_-\|DUF982-domain-containing-protein	gnl\|CDD\|368772	pfam06169, DUF982, Protein of unknown function (DUF982). This family consists of several hypothetical proteins from Rhizobium meliloti, Rhizobium loti and Agrobacterium tumefaciens. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	0.000576088
NZ_CP033368.1\|WP_081296214.1\|3322030_3322858_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	1.97582e-74
NZ_CP033368.1\|WP_064985825.1\|3320643_3321141_-\|DUF2306-domain-containing-protein	gnl\|CDD\|227683	COG5395, COG5395, Predicted membrane protein [Function unknown].	2.80249e-60
NZ_CP033368.1\|WP_064985820.1\|3322860_3324141_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	5.69694e-74

>NZ_CP033368.1|WP_019859563.1|3315851_3316133_-|DUF982-domain-containing-protein
MTAFMPITLRFCDNKTMLVGSVADAETALRHQWPDKTAPAYIEAARLVRLAVEGSCCPRTAFEAFSKTARQQGILVVKPRSRAHDWLDAAAGP
>NZ_CP033368.1|WP_032921203.1|3315449_3315767_-|DUF982-domain-containing-protein
MGTLKTGVPLKVNLEGHVEEIDSVSDAADFLQRWPIERRGHVYRSALNACSAAIAAQISESDAIKVFTGFARVAGILVAEGGPPMRLEARTVQSRMPKQGRQIPK
>NZ_CP033368.1|WP_064985839.1|3314572_3315250_+|GcrA-cell-cycle-regulator
MASYSDAELQEIARWLKEGLSASRIAAAFSALRGSQVSRNAIIGIVHRNAMLGAIGFANGQGMPPVARQAAGERTMRKPAAVERANGKASGKAVAQERAGVHPAEGARKNKARPRRDSSPAWLPPRLFVREVGVLIADGEAYRLEPPAPQRGPIGRQPHGVAMRFIDCLFDRCRAPLDLTLEEDPENDAPGGRPGADMLCCGMRTKEQKSYCGYHQARFQRRVCT
>NZ_CP033368.1|WP_019859568.1|3313279_3313984_-|helix-turn-helix-transcriptional-regulator
MGAMAKTELSIKVGAAIRQARKQRGLVMRHIAEHNDTDVAAVGNWETGRNLPKTENLLKTAAFLRVDPVALGKGEVVFLDDAGPVADAEIVTDAGPMPAGSMDIEVLGAAVGGDDGDFTFNGEPAGYVQRPPGVRNLPKVFALHVLSDSMVPRYEPGDLIYCGGRDAVPGDHVVIETFPEENEKNGKAFVKKLVKRTASELVVEQYNPPKTLTFNRYAIKHVWRVIPLKELLGY
>NZ_CP033368.1|WP_019859569.1|3312921_3313224_+|hypothetical-protein
MALPGRKPVIAHVASISVECADCGRNRWWKPDELRRFGVTGSTPLAELSGRIVCSACRADGLPGTAVSIQAAFIDERQRVRSEAQMLSEREVLVEGARRA
>NZ_CP033368.1|WP_064985841.1|3312385_3312805_-|hypothetical-protein
MLSRTRKCESPAASDPGAVMDAADFARACGYTGDSPALLEAFEVIRRNGITHARQDHFRRKAVIDELKQSEPLFLAAIGPALSAQEAIEDTARFIACWRNMPRWRQERRLPDLVRARQQRLAARFFRRYGHRLWALEAA
>NZ_CP033368.1|WP_064985844.1|3311704_3312286_-|hypothetical-protein
MFRTARSKVQTWITAGAGTIAALFVAGLMGAFGALPAHAPPQLPLDTAIDAGRWRVQPVRAYVSHAKVYGVLMKPGQKALVLEADMTNRTAQSDKAYFDVFKPDGLALPDPMPMIALTRDETLTPELHPGMTERMAYVWPLAGDAIVPASLSFGVTAEIFKPRDNLYGMPGWFNPYRLGTITLPVADVPATGS
>NZ_CP033368.1|WP_064985846.1|3311111_3311708_-|hypothetical-protein
MRIRILGNLVILGATVVLSYGMQVSKPHYADLTAPIPADGAMHDTIRARSFDVRLDKVVFARALKTNQFGRQKLLTTSGLWAVVTTSLTATAASTTVADGTWQGPTGLRYHQTERLGYRQDMPPHGVDPGLEKRGLLVFEIPPDQIRGASLLIAARQFGPLDAQARISLDGLPTSADGQPADVLPEYDLDAPPPQGKS
>NZ_CP033368.1|WP_038648300.1|3310533_3311115_-|hypothetical-protein
MSAVSTAPGPIASEDRQAEQKWRRRSLVALAILLPLTLAETSYDSLREWLHGEDLIARDVDFGQSVPFGGSDWKLADLRGGKAGRLPDHAFAVIATFSVKIGDPDLQKQWLGCKLMLTDAAGRRWLPDVIAGVSLPAGVMNCTSAIFSGVKKGDTVTIGDIFIVPEDAVKTIRPAVGLSSERPWFLRFQRPPK
>NZ_CP033368.1|WP_064985848.1|3309068_3310334_+|hypothetical-protein
MFADIIRPISLSFSLLQRFWPQLVALVLAGVLAGDLLLQLAAKVALANHFAGLAMLTLVALAQLVVTVAMFHVLRPGLPHLLAAQRGANKAAEEQVTGDRRGSRLVRMITIALLPFFAYYAAWGFLGDIVRQYSRATLDQADFGQAGNVLDVLDSRWLLISVAVSWLIRRLAKFMQTKTKTASFWQIVVVICETNWIFVGLYVISRWKDTALQWLMSRSFWSVVQASADGLASPVPVATAAPMVPVEITSIAPSTVAINLFFYMLLPLIWLVMAALIYGYDVRDDAALMRVHNRVERFGKRYAGLPKFLRDFVEHFIAGYRSRYLPIANGVRLTVSSSLLLLCTLIIGYRLIDWGAAWLWLGATRLIGPHELDVWQIFSHGVTLLFGSPFQDSSTGILIEPIRICFLAAVLETAFSLSKGR
>NZ_CP033368.1|WP_147377521.1|3316835_3317213_+|hypothetical-protein
MTAAELQQATKALAAMFSCFPQSALTDVEMQMRGYLGAVRDAELADLQAAIQRFVRGEVKSGNAQFCPSSAQLCIELRERRVMRELMARRAASQILGSSPPQGGGEVARRSRDGEGGDLRQAKAG
>NZ_CP033368.1|WP_064985833.1|3317387_3317981_+|hypothetical-protein
MPKKAKAAKPQAPKLPKGEAEQVRIRRELGHDFALSDDAFGRKRLATGTAEARRVYEVSNDGYTSTGGIVRVRNVDPLLGITSLSRQQREAGQRYREDFQCSQQASVKPMRWSERVDGRRHGGGIADSVLDSGRAHAAATRALGHWEVAVVVRQVCCVGGSIKSLAEQTGEGRDVVTKLLKVGLDLLAVHYGMMMGR
>NZ_CP033368.1|WP_064985830.1|3318039_3318342_-|hypothetical-protein
MKKLLLVSVIAIASAAAMIAPAAARSHVFIGIGGFDNYYGNDYYDGYGDYGGGRYVYSPYDPYDDGYRPRYFHRHHRCHIEVINHWRHHHRIVEEVRVCG
>NZ_CP033368.1|WP_064985828.1|3318534_3320505_-|acyltransferase
MAASFRPDIQGLRALAVGGVVAYHFGLSALPGGFAGVDIFFVISGWLITTHLMGEITETGRLDLWRFYARRARRLLSAALFVILMTLGLGYFILAPQEQALYSRGAMFASAYAINLWLLRWSFDYFAADALSNPFIHFWSLSVEEQFYLVWPALLLFAAWLRPDRRMAVVVIGVAGLASFAACLWLTSLSPAWAFYFSPLRAWEFAAGGLATQAPAALWQQRPWLRSAEGWLGLVLIAVAYLSLSEDLPFPGWYALLPVAGTVLVLLSGAGEENDAAETSPARWQALAPASVLSLAPLQWVGTLSYSLYLWHWPVIVYAGMLAPDLSILRRFGCGALALAFLTYHLIENPARRGGWLTVGARALAPALALTGMGVAAAYANAHLAARNIDSAQRGIEQAAEQPSIARAVDKNCLLDFHTVKPKPCTFGPADAAHTIVLFGDSHADHWSTPLVEAAKRNDTKVVTYLKSSCRASRLSTFNTVLKRDYTECDAWREQAITDIIRRKPRLVVISEFSIGNLTRDMPAAGRKAETARWQAGLRSTLQAFSQAGVETAVIRDTPIGDSFADSCVARALWWREAPSRCDTPRAQAANDSTAAQERAVVKSVPDTRYVDLTDRFCGPTQCHVFIGGKLAFRDRHHLATAFAETLEGPLEKALF
>NZ_CP033368.1|WP_064985825.1|3320643_3321141_-|DUF2306-domain-containing-protein
MSLSPLFHASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLFIWTIRLWGPFSPIHLLSLFVLVMLWRGVRAARGGNIAAHRRIMQGTYIFGLIITGLLTFIPGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYASRSARVPG
>NZ_CP033368.1|WP_064985822.1|3321276_3321582_-|hypothetical-protein
MNTKMICFGAMALSMVAGSALAASGSGTSALDDPAKMQPFYTDSTMKTMRSNDEFIKAWKALTPEDQKMVMAACDDEAKNANPTNAHPEFCSSVKQNGGSK
>NZ_CP033368.1|WP_081296214.1|3322030_3322858_-|ABC-transporter-permease
MLLSPYPTPGERIRVALLWLWCGLVILFLLVPILIPVPLSFNSGAFFIFPLEGLSTRWYEVVLGTQRWQSAIGNSLIVAFGTTLIATTLGTLTAIALSNEKFPGRRIVMPLLLSPLIVPVVITAVGSYLFYARIGLASTYAGIILAHTALASPFVVVTVGASLTGFDRNLMRAAAISGAKPLTAFFRVMLPLILPGVLSGAAFAFVTSFDEVVVVQFLASAGQRTMPLEMFIGLREKLSPAITAAATLMMALSIVLLVVANLLARRGQARRPASG
>NZ_CP033368.1|WP_064985820.1|3322860_3324141_-|ABC-transporter-permease
MSALQPSELDRPALARGRPAAGADPKTASAAMRRAEFGDRLRSLALAAPLLLLLALSFGIPIVLLLSRAVYDPTIADALPRTSQALADWNGQGLPADAAFIALAADLSENQAKGTAYELAKALNARLPGARSQVLKTVRQLEGAAGKPPLEIVKAVPFWSAPGTWPTIANGTHALTSFYLLSALDLRWNADGGIERVPPEQAIFLQVFLRTFFVAAAVTLATLLLGFPLAYLIASVPKGLAAILIVAVLLPFWTSILVRTAAWTVLLQKFGLVNDMLLWLGFASERLDLMYSRIGLIIAMTHIQLPFTLLPIYSVMRTIAPSQMKAAYSLGARPFTAFRRVYLPQVFPGVMAGCLLTFILCLGYYITPALIGGASDQLISNFIANYVNVELNWEMAAALSFILLVFTLALFGIFARILGLDRLKMV
>NZ_CP033368.1|WP_081296213.1|3324147_3325200_-|ABC-transporter-substrate-binding-protein
MKIAKTRMLAFAAATALFSIGHAALADELSIMASGGAWQDAQRKAWFEPFSKETGAKILEQEYLGDLGKVKAMVDTGNVPIDLVTVETATVLQGCDAGILERLDYSKIGPRDKFIEGSALDCGVGLDAYGDILAYDPTVLKEAPTSVLDLFDTEKFPGKRAMRKFPAQNLEWALMADGVAPADVYKVLATPEGVDRAFKKLDTIKNDIVWWDAGAQPAQLLASKEVVMTTAWNGRIQNAIDTDKKPFKIVWNNQILEYDMIAIPKGAKNPELAYKYLAYISKPDNNAKLASYITYGPVRTDAASFVAADALPKLPNAPDHLAGAYLVADTEFWGDYGEDLVKRFNAWLAQ
>NZ_CP033368.1|WP_064985816.1|3325243_3326377_-|ABC-transporter-ATP-binding-protein
MSALAASSPASASAAGPAFVDFVDVEKSYDGRAFAVTRLNLGVARGEFLTLLGPSGSGKTTTLNMLAGFERPTSGTITLEGRPVDRLPPYQRNIGMVFQNYALFPHMSVAENVAFPLSVRQVSKADIAGRVGRALDMVRLKQFGDRKPAQLSGGQQQRVALARALVFEPSLVLMDEPLGALDKKLREHMQLEIKQIHTMLGVTIVYVTHDQSEALTMSDRVAVFNNGAIVQLGSPDDLYNAPQSSFVASFIGENNTLEGIVDRVSGKECRVRLTGGGELTALAIGVAQGNACHVAIRPERLSLMPAGANALPATVDGRIYLGDHLRLLARLGNDQVLTVKVGPEATMANGEAVTVSCAPQDCRAFPADAAAAKAGPS

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Crispr_ID: NZ_CP033368_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033368_2

3554581-3555030

Orphan

Consensus_repeat	Method
GCCTTGCCCTGGGCCTGC	CRT

12 spacers

The CRISPR arrays of NZ_CP033368_2

>merge|NZ_CP033368|2|3554581-3555030|CRT
GCCTTGCCCTGGGCCTGCTGATCGGTGGTAGCATTTGCCTTGCCCTCGGCCTGCTGATCCGTCTGGACCTTGGCCTTGCCCTGGGCCTGCTGGTCGGTGGTCGCATTTGCCTTGCCCTGGGCCTGCTGATCCGTCTGGACCTTGGCCTTGCCCTGGGCCTGCTGATCGGTGGTAGCATTTGCCTTGCCCTCGGCCTGCTGATCCGTCTGGACCTTGGCCTTGCCCTGGGCCTGCTTATCGGTGGTAGCATTCGCCTTGCCCTGGGCCTGCTGGTCCGTCTGGACCTTGGCCTTGCCCTGGGCCTGCTGATCGGTGGTCGCGTTTGCCTTGCCCTCGGCCTGCTGGTCCGTCTGAACCTTGGCTTTGCCCTGAGCCTGCTCGTCGGTCTTGAGCTTGGGCTTGCCCTGGGCCTGCTGGTCAGTCTGGACCTTGGCCTTGCCCTGGGCCTGC

>NZ_CP033368|2|1|3554581-3555030|CRT
GCCTTGCCCTGGGCCTGC	TGATCGGTGGTAGCATTT
GCCTTGCCCTCGGCCTGC	TGATCCGTCTGGACCTTG
GCCTTGCCCTGGGCCTGC	TGGTCGGTGGTCGCATTT
GCCTTGCCCTGGGCCTGC	TGATCCGTCTGGACCTTG
GCCTTGCCCTGGGCCTGC	TGATCGGTGGTAGCATTT
GCCTTGCCCTCGGCCTGC	TGATCCGTCTGGACCTTG
GCCTTGCCCTGGGCCTGC	TTATCGGTGGTAGCATTC
GCCTTGCCCTGGGCCTGC	TGGTCCGTCTGGACCTTG
GCCTTGCCCTGGGCCTGC	TGATCGGTGGTCGCGTTT
GCCTTGCCCTCGGCCTGC	TGGTCCGTCTGAACCTTG
GCTTTGCCCTGAGCCTGC	TCGTCGGTCTTGAGCTTG
GGCTTGCCCTGGGCCTGC	TGGTCAGTCTGGACCTTG
GCCTTGCCCTGGGCCTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033368.1\|WP_147377513.1\|3550208_3550664_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_147377514.1\|3545210_3546695_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_171880378.1\|3546971_3547868_+\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270704
NZ_CP033368.1\|WP_064981765.1\|3562585_3563488_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|366166
NZ_CP033368.1\|WP_019859309.1\|3557530_3558688_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226434
NZ_CP033368.1\|WP_064981965.1\|3560713_3561010_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064981768.1\|3559224_3559470_-\|DUF982-domain-containing-protein	unknown	unknown	gnl\|CDD\|368772
NZ_CP033368.1\|WP_019859308.1\|3558871_3559105_-\|DUF378-domain-containing-protein	unknown	unknown	gnl\|CDD\|225066
NZ_CP033368.1\|WP_120145566.1\|3551315_3553505_-\|caspase-family-protein	unknown	unknown	gnl\|CDD\|226700
NZ_CP033368.1\|WP_064981783.1\|3547995_3550212_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP033368.1\|WP_064981779.1\|3550997_3551225_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064981772.1\|3556636_3556939_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064981766.1\|3562052_3562589_+\|MgtC/SapB-family-protein	unknown	unknown	gnl\|CDD\|224204
NZ_CP033368.1\|WP_064981789.1\|3541853_3542927_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP033368.1\|WP_064981787.1\|3543137_3545114_+\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP033368.1\|WP_064981777.1\|3553899_3554130_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_064981770.1\|3557212_3557452_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235093
NZ_CP033368.1\|WP_019859315.1\|3553558_3553723_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP033368.1\|WP_019859304.1\|3561413_3561896_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|379804
NZ_CP033368.1\|WP_064981773.1\|3555445_3556450_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381302

Protein	Function_ID	Function_description	E-value
NZ_CP033368.1\|WP_019859304.1\|3561413_3561896_-\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|379804	pfam16242, Pyrid_ox_like, Pyridoxamine 5'-phosphate oxidase like. This domain, approximately 140 residues in length, is mainly found in general stress proteins in various Xanthomonas species. It is composed of a six-stranded antiparallel beta-barrel flanked by five alpha-helices and can bind to FMN and FAD, suggesting that it may help the bacteria to react against the oxidative stress induced by the defense mechanisms of the plant.	4.69498e-53
NZ_CP033368.1\|WP_064981789.1\|3541853_3542927_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	4.94999e-165
NZ_CP033368.1\|WP_064981768.1\|3559224_3559470_-\|DUF982-domain-containing-protein	gnl\|CDD\|368772	pfam06169, DUF982, Protein of unknown function (DUF982). This family consists of several hypothetical proteins from Rhizobium meliloti, Rhizobium loti and Agrobacterium tumefaciens. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.	3.12169e-21
NZ_CP033368.1\|WP_019859308.1\|3558871_3559105_-\|DUF378-domain-containing-protein	gnl\|CDD\|225066	COG2155, COG2155, Uncharacterized conserved protein [Function unknown].	4.15717e-24
NZ_CP033368.1\|WP_120145566.1\|3551315_3553505_-\|caspase-family-protein	gnl\|CDD\|226700	COG4249, COG4249, Uncharacterized protein containing caspase domain [General function prediction only].	3.11432e-107
NZ_CP033368.1\|WP_064981783.1\|3547995_3550212_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.57634e-11
NZ_CP033368.1\|WP_064981766.1\|3562052_3562589_+\|MgtC/SapB-family-protein	gnl\|CDD\|224204	COG1285, SapB, Uncharacterized membrane protein [Function unknown].	4.51296e-48
NZ_CP033368.1\|WP_019859309.1\|3557530_3558688_+\|PAS-domain-S-box-protein	gnl\|CDD\|226434	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms].	1.09327e-48
NZ_CP033368.1\|WP_064981787.1\|3543137_3545114_+\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	4.8365e-71
NZ_CP033368.1\|WP_064981770.1\|3557212_3557452_+\|hypothetical-protein	gnl\|CDD\|235093	PRK02967, PRK02967, nickel-responsive transcriptional regulator NikR.	0.00651596
NZ_CP033368.1\|WP_171880378.1\|3546971_3547868_+\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|270704	cd05155, APH_ChoK_like_1, Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase and Choline kinase. This subfamily is composed of uncharacterized bacterial proteins with similarity to APH and ChoK. Other APH/ChoK-like proteins include ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). These proteins catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. The APH/ChoK-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.12437e-83
NZ_CP033368.1\|WP_064981765.1\|3562585_3563488_-\|alpha/beta-hydrolase	gnl\|CDD\|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	8.48609e-25
NZ_CP033368.1\|WP_064981773.1\|3555445_3556450_-\|aldo/keto-reductase	gnl\|CDD\|381302	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR). Schizosaccharomyces pombe aldo-keto reductase YakC is a founding member of aldo-keto reductase family 13 member A1 (AKR13A1). It catalyzes the reversible reduction of ketones to the respective alcohols using NADP(+) as a hydride donor. Rauvolfia serpentina PR is a founding member of aldo-keto reductase family 13 member D1 (AKR13D1). It catalyzes the NADPH-dependent reduction of the aldehyde perakine to yield the alcohol raucaffrinoline in the biosynthetic pathway of ajmaline in Rauvolfia, a key step in indole alkaloid biosynthesis. This family also includes Arabidopsis thaliana aldo-keto reductases, ALKR1-6.	1.24089e-180

>NZ_CP033368.1|WP_064981777.1|3553899_3554130_+|hypothetical-protein
MRSFELVDLLYVVEACKHDRVVGNFVSMAEGVEELRVLTGDFVSPDDVVANALSTVALARGCSVVFDEQAGAEIQL
>NZ_CP033368.1|WP_019859315.1|3553558_3553723_-|hypothetical-protein
MRDKIRADVMGERLPSIVKLTSEYRNIFGPARLADISADGFFPPDLKPSLYMRF
>NZ_CP033368.1|WP_120145566.1|3551315_3553505_-|caspase-family-protein
MISRMLPSGNGGEGMLRKSFSSYLRQGLLLAFLATFSTLWLAQAHAERRAAIVVGNSEYPFAPLTNPRNDAKLIANTLTELKFDVLLFYDVKKSAEKDLNDAIRAHLIGADMAVFYYAGHALQYNGQNLLLPVDTRISSAKDVAADAMRLNDLIDIVKNDPVGVKVFILDACRNNPVAKEKGLQQGLAYTEAGSGQVLVAFATSAGEVAYDGTGINSPYSSALANALLMPNLDVYDTFRTVRGDVRQATAGSQIPWITGSIETKFVFRQGDAGKQVAQAEHAAEANGGLTIDEVLWSFISDSQNPEDFERFVKVFPNSRYAAEATEKSRFKVAALTKRGLYVNGNLVSSSIAAVAPVEASDKALSEEFVFQQAGERAVSETFRIWPSNLPDTQRGMRTMVTDCDLYAADPNDPQRAVPGVTNGLVNVRDALRACAFALAADINNPRLQFQFGRVLEIARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDFYVRAAALGNLRARTDIGSAYIAGQGVPKLPQEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLAADPRRALTLLELSANRGNEYAYVRLAWGHRDGLFTGKPDLRRAYFDASLAARLRADQGEQAKAEIAKKIDPATRKEIDGEVELYIKQNGP
>NZ_CP033368.1|WP_064981779.1|3550997_3551225_+|hypothetical-protein
MARLLLAKMASAAALVSTSVMLSGCWTIAGRPILCDFGFSLKDGRCAKVTKLTKVTKVSTPQPDKSSSKRGDSHY
>NZ_CP033368.1|WP_147377513.1|3550208_3550664_-|hypothetical-protein
MRKLKELFLRKDKQDPGDEGPGNIYVYKSKEEISTIIVTTLGVDPDLLEEIIVTTKRKLSGKSDRLIYLTDNSDFTIFRRHGVIFEYLPPLVEQRLHAADMPWQAYLREHWGLLLAKWRPRRVLAYGTTIDSFLAAAPTASVRNAPDMPRS
>NZ_CP033368.1|WP_064981783.1|3547995_3550212_-|glycosyltransferase-family-1-protein
MRLDILFVADVRFEGGTSTALAVEIRAAARAGFKTGLLAVKGPLLRNPYPMHPDLRALIDGGATERIDPDTKVDADLVLVHHPAIMSNRFTRRTGIRTERMVMVLHHPMVDRRGKLQYDLARIVSNCRWAFGVKVWLATVSAVVRDALPRHLPAGAELLPENWTNLIDLDDWPRRPDGPPHNPVIIGRHARPDKLKWPSRAADALRIYPADAARYSIRILGGGPFLRELYGPLPANWEILPFAWTGIAGFLQGLDFYVYYHSDSWSEAFGRTILEALAVGLVTILPAHFQPLFGDAAVYAAPRDVEGVIGKFITDADAYARQSALAREFVARYHSAELFPQRLERLFNISKPRDAAAVRASTIQPLPIRQVLFASSNGIGMGHLAQQLAVAQRLPRGLKPVFATMSYAMKIAAEEGYHAHFLTHHRGIDAAPVDWNDVLAEELFDLISHLRPAVFAYDATAVFDGVVAALAMDPNLFSIWVRRPMWRESHRPFLEMADAFDAVIEPGELADEFDHGPTSEVRDKVLLVPPVLLLEPNQRLDRAAARNFLEIPDGMTVVALQLGSGSNFDMRGVRNGVLKAVLDRPDTLVLDIRSPIRADFESDEPVGPRHRIVELFPSFNYSRAFDAAVVAPGYNTFHENILGAVPTLFVPNESDEMDLQLNRARWAELGGFGLLMRRDHDLPHVDRFIEQLLDPTEREGMAARCEAVPWTNGADVIANYIEDHARMVRTDWDITKDS
>NZ_CP033368.1|WP_171880378.1|3546971_3547868_+|aminoglycoside-phosphotransferase-family-protein
MMHDDQVDIDIDIARQMIRDQFPQYRHEDVTSVGSSGTVNAIFRIGSKSAARFPLRAMKPTECADMLRSEAAAMVEIGQHCLFPTPQPIGLGQPGPRYPMPWAVQTWIEGEVATPNGLSGSAIFALDLASLVASLRQADTRGRRFDGQGRGGHLPDHDDWMAVCFENSEGLLDVARLRDLWARLRELPAAEPVVMSHKDLIPPNLLVQGERLVGVLDSGSFGPADPSLDLAVAWHLLDRERRATFRSGLQVEDLLWKRGAAWAFQQAMGLVWYYRRTNPAMSALGRSTLSRILDNPDI
>NZ_CP033368.1|WP_147377514.1|3545210_3546695_-|hypothetical-protein
MPNEQTSIDPGAAETQLGPSVSVQVNPEDSVPFRPEPVFISLGLKRDVFVGFSGGNAAPNPDPMGIPPVDLKTENGLLKAFLLLGFEPGPDTTPFGFSMPAIFRASAAFRETVDLPGLNVPMPPAVIGQQPPVIKPGMIQNYMALQANFFQMSLAPLQAKLREARVPFTQGGIPAPEDLRPQLFLVEQYQLASFRGDLARDDLVDSISLSPGGSMTYKVIIKKRTSASNELTSTVLDSQDREAKDNFNKQLKDTADKRSGTNNYDYGFEGSFHGEASVEIGGGSADARVHARGSTNEVRQDFAESTTSAIDSQVSETNRSRKQSIETGREDTQTDEQTESVREKTAHNPTAQPVNVGIFLLKEEFVSVLSLVDVEIAYRNGDANQDRQVPLRKLGELLDAVIERPEDRTEIAATIKALLEGIADYQDEIRSIVKPDPSSPLGFSRDAQLRSEYRLLKSDGTLRRTFSVKGIPIRGCERSLRRPNITVELPIAGI
>NZ_CP033368.1|WP_064981787.1|3543137_3545114_+|AI-2E-family-transporter
MAANRRNGTASEAHGLDDILAAAAPHPRTALPNVATTVTTVAALYFGREVFLPIAIALLLTFALAPFVSALKRVGIPRIAAVIASVLSAFAALALFSFVVATQVSELAQNIPVYQTNILAKIRSLKETGVGGGIIARLSSVVERVGQEIDRQDATLPAATADKPPREPVPVEIVARERPLEVLQNIVGPLISPLGSAGLIIVVVIFMLLEREDLRDRFIRLVGYGDLHRTTEALQDAAKRVGRYLLMQLVVNIVYAIPIAIGLWILGIPNALLWGMLALALRFVPYIGPAIGMLLPLFLALAVAPGWSLVLWTAALFVVMELVTGNVVEPWLYGSRTGLSPLAIIVAAIFWTWLWGPLGLVLSTPLTVCLVVLGRHVPQFEFLDVLFGNEPVLEPHARLYQRLLAGDPDEATDHAEEMLEEKYLVEFYDKVAIPALLLGERDRVRGVMGDLQRRQVAASALALVANLEDDAKEEAAEDESPEAGEPGDAADEDEAELPDGTGMSLLCAGGRGELDDAAAAMLAQVLEVQGATASKAGFADMEPASIRRLELETIDTVVVGFLNRDSVKHARFLVRRLKRAKAALRVGIVFWSETGNGDKEAADKLAQDINADFVAHGMVDAVTGALSNEPPVALKLVAKRRMRRPRAAPRKVPAAAAS
>NZ_CP033368.1|WP_064981789.1|3541853_3542927_+|D-alanine--D-alanine-ligase
MTEKTRVAILYGGRSAEHDVSRLSAANVLKAIDRTRYQVVPIAISRDGRWRLQPSSEAGADGAGAPVSEDGVEVALLPGGKGRLVALTESGEQPDPVDVVFPVLHGPFGEDGSVQGYAEVADVAYVGCGVLASAAAMDKDVAKRLLREAGLAVARSVTVRRGDVGSFQEIAGALGLPFFAKPARQGSSFGVSKVHDRDGFEQAVETALRYDSKALIEEFVDGREIECSVLERADGSLTVSPPGEIIPADKHGFYTYEAKYFDADGALVKVPADVPADVVARTSEMAARAFRALGCEAMARVDFFLRADGSLLVNEVNTLPGFTDISMYAKALAAIGIGYSQVIDVLIEHALARHAAR
>NZ_CP033368.1|WP_064981773.1|3555445_3556450_-|aldo/keto-reductase
MTLATRKLGSQGLKVSAIGLGCMGMSQSYGPADEAESIATLHRAIELGCTFLDTAEVYGPHTNEALLGRALKGKRDQVTIATKFGFRIENGKQLSGVDSRPEHIREVVEASLGRLATDHIDLLYQHRVDPDVPMEDVAGAVGKLVAEGKVRFFGMSEAGSANIRRAHAVLPVSALQSEYSLWERNLEPEIIPLLKELGIGLVPFSPLGRGFLTGDVKRAEDYPEGDYRRNDPRYQGENYDANVEAAGTVRDIAAARGVKPGQIALAWLLGKGSDFAVDIVPIPGTKRRKYLEENVAATSLKLDAAEMAALDEALAPGKISGPRYGERGMAMVDR
>NZ_CP033368.1|WP_064981772.1|3556636_3556939_-|hypothetical-protein
MRYDYSMRLRDDVNSAVEKAFKTAGIVNITVTAEQVRVMNLAENVALEDVEYLVLQAAQMLGAAIEFDTLGSGLVLSGNGVEGDEPVISPLILSQPASIQ
>NZ_CP033368.1|WP_064981770.1|3557212_3557452_+|hypothetical-protein
MAELERPERLQIMLTTDELAALENWRFEKRMPSRSAAVRELLRRGLSSDGFLTAEQGVKSQEFGVLPEGDGKTSDRPSE
>NZ_CP033368.1|WP_019859309.1|3557530_3558688_+|PAS-domain-S-box-protein
MPMTEIVAATATNNEKQSATADARLAAIVDSSFDAIISKDLTSIITSWNLAAERMFGYTAEEAVGQSILMLIPDHLKSEETEIISRVRGGHRVASYETTRRRKDGALISVSLTVSPIKNANGEIVGASKIARDISAAKESERRIRLLMREVNHRVKNQFAVILSMVRETSKRSSDPREFEELIRARIMALSRSHDLLVTSEWAGASLFDLIQEHLKPFGREEQILLSGPVLTLQSNAVQNLGMAFHELGTNSSKYGALGSEDGQVEITWTIGSSAQGSGTQDLGAKDLGAKDLGRSVGASGGRDFQLLWTETSTPRPDDKGDESARKGFGTVVLQRVAPQSLGGSAQLERSPGRLSWRLSAPLASIIVPQAGIEGDDGAALGFGI
>NZ_CP033368.1|WP_019859308.1|3558871_3559105_-|DUF378-domain-containing-protein
MRIMNLVTLALIILGGLNWLSMGVTGYDVIGTVLGGAMLARLAYLIIGLAAIWQLMPGFQSFTVGEVDAERHLPHHR
>NZ_CP033368.1|WP_064981768.1|3559224_3559470_-|DUF982-domain-containing-protein
MQPGWFSKPVVVSVGVAGATRHLSNTQQAIELLTTHWRDAGSLKHQSALRACRQATSGDVPPDIAREALIEAAREAHILVE
>NZ_CP033368.1|WP_064981965.1|3560713_3561010_-|hypothetical-protein
MPARLPVLLMSLGALLAATAAAEARPDSRGMSCADIRAMIQSRRAVVLTTGPNTYDRYVRQFGNECDWPEVPMSAYIPARDGHCPVYRCEEPVDNFPN
>NZ_CP033368.1|WP_019859304.1|3561413_3561896_-|pyridoxamine-5'-phosphate-oxidase-family-protein
MAIEKNDLDRVWKLMDKIGFCMLATREGDDIRSRPMAAHVVRGENAVYFLTDVDSHKDDEIEAEPNVALAFADSGGQKYVSVSGQAEVSNDRAKIKELWSTPAKAWWDSADDPAIRVLKITPKDAQYWDSPGTVVSYVKMLAAAVSDSRPEIGDSGKVRM
>NZ_CP033368.1|WP_064981766.1|3562052_3562589_+|MgtC/SapB-family-protein
MEQLVEEFGHPSYTSFPVIAARLLLAALYGAVIGFEREWRNRPAGLRTHILICVAAATFGILTIEIVHAPMFAQDSVKVDPIRVVEAVTAGVAFLAAGSILFSRGEVHGLTTGAGMWLAGAIGVACGLGLWQVAGLATLIVLVVAGLVYRLGPHPQDIKGDRGAPSPRSGDSPGKVDH
>NZ_CP033368.1|WP_064981765.1|3562585_3563488_-|alpha/beta-hydrolase
MFGIFQSMEIDTGEAGIFIRRAGNGPALLLLHGFPQTHLMWRDVAPELAERFTVICADLRGYGASACPSSDSAHAPYAKRAMAADMAALMAKLGFGSFMVAGHDRGGRVAYRMALDHPGRVEKLAVLDIVATADAWDRADARLAQGYWPWSLLAQPEPLPELMLAGAAEAVVDNALGGWGSSPSAFPPEVRQAYVDALRDPAHIHAICEEYRAAATLDREHDHADKAAGRRIRCPVLALWSGQGALADWYAGEGGPLALWRGWADDVRGQAMPGGHFFPEEAWQQTARALANFFGEPDRA

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Crispr_ID: NZ_CP033368_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP033368_3

4993117-4993204

Orphan

Consensus_repeat	Method
CGCAAGACCGGATTCCACTTTTGCTGATCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP033368_3

>merge|NZ_CP033368|3|4993117-4993204|CRISPRCasFinder
CGCAAGACCGGATTCCACTTTTGCTGATCGCAACCTCCCGGTTGGCGCGCGATCTGACGCAAAACCGGATTCCACTTTTGCTGATCGC

>NZ_CP033368|3|2|4993117-4993204|CRISPRCasFinder
CGCAAGACCGGATTCCACTTTTGCTGATCGC	AACCTCCCGGTTGGCGCGCGATCTGA
CGCAAAACCGGATTCCACTTTTGCTGATCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP033368.1\|WP_019857745.1\|4994535_4997916_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273971
NZ_CP033368.1\|WP_038646392.1\|4988634_4989285_+\|FMN-binding-negative-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225366
NZ_CP033368.1\|WP_019857742.1\|4999656_5000655_-\|sterol-desaturase-family-protein	unknown	unknown	gnl\|CDD\|225546
NZ_CP033368.1\|WP_038646368.1\|5003957_5004701_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP033368.1\|WP_064982729.1\|4998529_4999660_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|227940
NZ_CP033368.1\|WP_019857749.1\|4989281_4990112_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239483
NZ_CP033368.1\|WP_064982727.1\|5002521_5003961_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP033368.1\|WP_019857741.1\|5000962_5002267_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP033368.1\|WP_010909058.1\|4991848_4992181_-\|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|226461
NZ_CP033368.1\|WP_019857736.1\|5005224_5006253_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378117
NZ_CP033368.1\|WP_019857752.1\|4984829_4986347_-\|Fe-S-cluster-assembly-protein-SufB	unknown	unknown	gnl\|CDD\|236990
NZ_CP033368.1\|WP_064982724.1\|5004697_5005141_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|366361
NZ_CP033368.1\|WP_027051599.1\|4992173_4992908_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133022
NZ_CP033368.1\|WP_064982732.1\|4990157_4991807_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|224720
NZ_CP033368.1\|WP_027046762.1\|4987938_4988613_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225496
NZ_CP033368.1\|WP_064982734.1\|4984046_4984802_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP033368.1\|WP_064982731.1\|4993275_4994529_+\|tyrosine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235645
NZ_CP033368.1\|WP_051112893.1\|4982758_4984027_-\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_CP033368.1\|WP_064983521.1\|4986534_4987698_-\|cysteine-desulfurase	unknown	unknown	gnl\|CDD\|224029
NZ_CP033368.1\|WP_038646379.1\|4998011_4998479_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|224146

Protein	Function_ID	Function_description	E-value
NZ_CP033368.1\|WP_019857745.1\|4994535_4997916_-\|hypothetical-protein	gnl\|CDD\|273971	TIGR02099, probable_transmembrane_protein, TIGR02099 family protein. This model describes a family of long proteins, over 1250 amino acids in length and present in the Proteobacteria. The degree of sequence similarity is low between sequences from different genera. Apparent membrane-spanning regions at the N-terminus and C-terminus suggest the protein is inserted into (or exported through) the membrane. [Hypothetical proteins, Conserved].	0.00117136
NZ_CP033368.1\|WP_038646392.1\|4988634_4989285_+\|FMN-binding-negative-transcriptional-regulator	gnl\|CDD\|225366	COG2808, PaiB, Transcriptional regulator [Transcription].	2.51031e-106
NZ_CP033368.1\|WP_019857742.1\|4999656_5000655_-\|sterol-desaturase-family-protein	gnl\|CDD\|225546	COG3000, ERG3, Sterol desaturase [Lipid metabolism].	7.0705e-45
NZ_CP033368.1\|WP_038646368.1\|5003957_5004701_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	4.75542e-60
NZ_CP033368.1\|WP_064982729.1\|4998529_4999660_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|227940	COG5653, COG5653, Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane].	2.65629e-120
NZ_CP033368.1\|WP_019857749.1\|4989281_4990112_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239483	cd03389, PAP2_lipid_A_1_phosphatase, PAP2_like proteins, Lipid A 1-phosphatase subfamily. Lipid A 1-phosphatase, or LpxE from Francisella novicida selectively dephosphorylates lipid A at the 1-position. Lipid A is the membrane-anchor component of lipopolysaccharides (LPS), the major constituents of the outer membrane in many gram-negative bacteria.	1.36844e-64
NZ_CP033368.1\|WP_064982727.1\|5002521_5003961_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.20182e-106
NZ_CP033368.1\|WP_019857741.1\|5000962_5002267_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.99719e-43
NZ_CP033368.1\|WP_010909058.1\|4991848_4992181_-\|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein	gnl\|CDD\|226461	COG3952, COG3952, Predicted membrane protein [Function unknown].	2.31388e-50
NZ_CP033368.1\|WP_019857736.1\|5005224_5006253_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|378117	pfam09084, NMT1, NMT1/THI5 like. This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.	3.33313e-65
NZ_CP033368.1\|WP_019857752.1\|4984829_4986347_-\|Fe-S-cluster-assembly-protein-SufB	gnl\|CDD\|236990	PRK11814, PRK11814, cysteine desulfurase activator complex subunit SufB; Provisional.	0
NZ_CP033368.1\|WP_064982724.1\|5004697_5005141_+\|VOC-family-protein	gnl\|CDD\|366361	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.	1.97856e-15
NZ_CP033368.1\|WP_027051599.1\|4992173_4992908_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133022	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.	1.05821e-46
NZ_CP033368.1\|WP_064982732.1\|4990157_4991807_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	8.79821e-76
NZ_CP033368.1\|WP_027046762.1\|4987938_4988613_+\|alpha/beta-hydrolase	gnl\|CDD\|225496	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only].	1.60916e-121
NZ_CP033368.1\|WP_064982734.1\|4984046_4984802_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.1118e-142
NZ_CP033368.1\|WP_064982731.1\|4993275_4994529_+\|tyrosine--tRNA-ligase	gnl\|CDD\|235645	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated.	0
NZ_CP033368.1\|WP_051112893.1\|4982758_4984027_-\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	8.42422e-119
NZ_CP033368.1\|WP_064983521.1\|4986534_4987698_-\|cysteine-desulfurase	gnl\|CDD\|224029	COG1104, NifS, Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism].	8.63829e-148
NZ_CP033368.1\|WP_038646379.1\|4998011_4998479_+\|peroxiredoxin	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	8.46284e-78

>NZ_CP033368.1|WP_027051599.1|4992173_4992908_-|glycosyltransferase-family-2-protein
MPDALISIVIPCRNEAANLPLLIDEIEAAMAGRDFELIIVNDGSTDETAAVLTEQAALRSFPVRELRHQKSAGQSLSVRSGAWAARGGIVATIDGDGQNDPQYIPVLVDALRQAGPDFGAAQGQRLKRRDSKVKQLASRFANWLRNAILHDETRDTGCGLKAVHTDILRKLPFFDGTHRFVPALVIQEGYRVVHCDVVDRSRRHGKSNYGIFDRGLQGALDLGGVWWLRRRRRRMPKVEEIKRV
>NZ_CP033368.1|WP_010909058.1|4991848_4992181_-|lipid-A-disaccharide-synthase-N-terminal-domain-containing-protein
MFNVLQELGTWLHQVFIKQFDAWILLGFVAQFFFTMRFVVQWLASEKAKRSVVPVAFWFFSLFGGGLLLIYAIQRQDPVFIAGQAMGMFIYIRNLWLIANERKAAMTKVD
>NZ_CP033368.1|WP_064982732.1|4990157_4991807_-|glycosyltransferase-family-39-protein
MALNRNYIFLFLFSLAMTLSGLASLPPIDRDESRFVQATKQMAESGDYVDIRFQEASRYQKPIGIYWLQSAAVTLSGKGAEAPIWVYRTISALGIAIAVLAIAWTGTNLFGANAGIAAGLVMAAIFATAFEGRDAKTDAMLLACCVAAQGALAQIYFASRRNEPVAGHLWWIFWIAQGAAILIKGPIAPLLSALTIAVLFAFERDGRWLAKLRVGRGLLLVVVIALPWLAAITWKSHGAFLQQAVGKDMLGKVASGEESHGLPPGFYMLTYSLFMWPFGLIAVGAGLQALNRMRDDVRLRFCLAWYIPFWLVFELIPTKLPHYVLPAYPGMALLIGWLLMLQPEDANAPLKRWQQWLWWSTAFGLVVVSLGLAAVCIGAPIYLTHSFSWWSIPAAAAALGTGYFAFSRQLQVPLPRIGATAACAGITYALLFGVIAPSLKPIWLSPAIKQAVLANKPCATTVLASARYQEPSLVFLVGTKTVLTDVGGVAQHLLADPACALGLAPIEDEQKLNGMLSVQGKSMNRVAEVDGLNYSSGDKLSLGLYRVAP
>NZ_CP033368.1|WP_019857749.1|4989281_4990112_-|phosphatase-PAP2-family-protein
MLVKSRPTVSGRLLGVGRRSLSNFRDTTQIVRRRFAARPARYPNIAWPVWLVVWVLLTAAAFVRLDTPAGMVHGQWSGAGVAEFLTQFALGGWYLIPSALLLVGANLTDWRSLSRRSLMLVYNWTCLAFLVLSAVGLSGLLVNVLKYAIGRARPLYFQDFGVLALHPFAFDARFAGFPSGHATTMGAVFGVLLLLFPRRWYIALVITACLASTRVFVGAHYPSDTVAGFGLGCTFALACGLVFARLGFIFRPTPSGLPVRKASFRLIAPENKSLPD
>NZ_CP033368.1|WP_038646392.1|4988634_4989285_+|FMN-binding-negative-transcriptional-regulator
MYEPPHFQETRPDVLHGLIRAHPLGMLISNGPDGPVANAIPFLLDAAAAPNGRLRAHLAKANPHWRLIADNPASPVLIVFQGADAYVTPSWYETKRETGKVVPTWNYAIVQVRGAAKVIDDQEWLARQIGDLTASQEGAREAPWAVTDAPPPFIQSQIKGIIGLEIEISEIHGKWKVSQNRPVADRAGVAEGLESEVADASDMARLVRSYGGLDSN
>NZ_CP033368.1|WP_027046762.1|4987938_4988613_+|alpha/beta-hydrolase
MPEVIFTGPAGRLEGRYQPSKEKSAPIAIVLHPHPQFGGTMNNKIVYDLFYMFQKRDFTTLRFNFRGIGRSQGEFDHGTGELSDAAAALDWVQSLHPDSKSCWVAGYSFGSWIGMQLLMRRPEIEGFISIAPQPNTYDFSFLAPCPSSGLIIHGDADKVAPPKDVQGLVDKLHTQKGITITQKTLPGANHFFANHADLLIEECADYLDRRLAGELSDPRPKRLR
>NZ_CP033368.1|WP_064983521.1|4986534_4987698_-|cysteine-desulfurase
MAAKRAYLDYNASAPLLPAAREAMVAALDVAANPSSVHAEGRAARRLIETARREVAALVNARPEHVVFTSGATEAASTLLAPEWQMGRGSVRMSRLYVCEADHPCLLNGGRFPAGQVTRIGVDANGIADLAALAGALAGHDKADGLPLVAIHGANNETGVIQPIDRIAEIVKAAGGILVVDAVQAAGRVSIDMSAGYADYLILSSHKIGGPKGIGAIVAAADLMMPKPLINGGGQEKGHRGGTENLAAISGFGVAAREALAGLPAIDAVRQHRDEIEAIVKMLVPDAEIFGTDAPRLANTTFFAIAGIKAETAQIAFDLAGVALSAGSACSSGKVGPSHVLKAMGYGDSLGALRVSIGAATGAEDIELFRTALAGIAQRRAGREQAA
>NZ_CP033368.1|WP_019857752.1|4984829_4986347_-|Fe-S-cluster-assembly-protein-SufB
MPAVQDTIDRVRKIDVDQYKYGFQTEIAVDKAPKGLSEDIIRFISAKKDEPSWMLEWRLEAYRRWLTLEEPTWARVHYPKIDFQDIYYYAAPKSTPGPSSLSDVDPELLKVYEKLGIPLREQEILAGVQKTDASELEEPSDNVYKSGRVAVDAVFDSVSVVTTFKKELAQAGVIFCSISEAIREHPELVQKYLGSVVPTSDNFYATLNSAVFTDGSFVFVPKGVRCPMELSTYFRMNEKNTGQFERTLIIAEEGAYVSYLEGCTAPQRDENQLHAAVVELVALDDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGDCRGDRSKISWTQVETGSAITWKYPSCILRGDDSSGEFYSIAVSNGYQQVDSGTKMIHLGKNTSSRIISKGIAAGFSQNTYRGQVSAHRKATNARNFTNCDSLLIGDQCGAHTVPYMEAKNSTAQFEHEATTSKISEDQKFYVMQRGIPEEEAIALIVNGFVKDVIQQLPMEFAVEAQKLIGISLEGSVG
>NZ_CP033368.1|WP_064982734.1|4984046_4984802_-|Fe-S-cluster-assembly-ATPase-SufC
MLEIKNLHARIVDDGTEIIRGLNLTVKAGEVAAIMGPNGSGKSTLSYILAGREDYEVTEGDILYNGRSILEMDPAERATSGIFLAFQYPMEIPGVATMEFLKVAMNEQRKARGEEPLKIPEFLKRVKEAAASLSMDMAMLKRPLNVGFSGGEKKRAEILQMKLLEPKLCVLDETDSGLDIDALKIVSDGVNALRAPDRAFLVITHYQRLLEHIVPDSVHVLYRGQVIKSGDKSLALDLEANGYAGVIGEAA
>NZ_CP033368.1|WP_051112893.1|4982758_4984027_-|Fe-S-cluster-assembly-protein-SufD
MNMHTQPQRTPAETALIDAFGDRLSLLPGDGAVMLKRDDAIEAIKHGLPTRRVESWHYTDLRRLLSVVPDFDPAAMAKAIAPIVEGSAVLPVLNGKSDAKVPAIEGVAVQCLSEKLIDGSIAPGLDPYGSDDAIGALNTAFVADGYFVDIADGAELEKPIELQNVQAGGQTHVRLAVRVGAGAKAVIVERQAGDGAALVSSVSQLVLGEGAEVTWLIVQEQPDTATHLAQFKAHIGKNAKLTLFVMNAGGKLVRQEVMVKTTGEGADFKLRGINLLAGDTHSDVTMVLDHAVPHTTSTEVIRNVVTGKARGVFQGRINVHQYAQKTNAKMACNTLLLSDDGEFSTKPELEIFADDVVCGHGATVTEIDHDHLFYLMARGVDEKSARGLLVKAFVAEVIEELDDETIVEALEARLDEWFVTHG
>NZ_CP033368.1|WP_064982731.1|4993275_4994529_+|tyrosine--tRNA-ligase
MPAFKSDFLRTMSERGFIHQISDETGLDELFAKETVTAYVGYDATATSLHIGNLISATMLYWLQETGHRPIALMGGGTSMIGDPSFRDDQRSLLTPEAIATNIEGIKRIFGRILRFGDGPNDAIMVNNADWLMKLNYVEFLRDVGRHFSVNRMLTFDSVKLRLDREQSLSFLEFNYMILQGYDFVELARRQNCRLQMGGSDQWGNIINGVDLGHRMGTPQLYALTTPLLTTSSGAKMGKSAKGAVWLNGDLFSPYDFWQYWRNTEDADVERFLKIFTRLPLDEIARLAALGGSEINEAKKILATETTAIVHGREAANQAEETARKTFEEGALADTLPTVGADKAALEAGIGILSLLVTAGLASSNGEARRHIQGGAVRINDQTVNDDRRMVTLQDLSPENVVKLSLGKKKHVLVRPA
>NZ_CP033368.1|WP_019857745.1|4994535_4997916_-|hypothetical-protein
MDQEQPQHEKIRFRRDEITDLGALPSACRVPPLGQASIGRGFRILSRVFAGMVAFMVLAAVVVYLVGASGVGSERLRAEAETAIEKLAGVDVNVAVGPARITLDSSSFVALQVSDVSLRTSDDKPMADAGRVRFGMRLIPLLWGEVRLTSARISDAHIVVAAMPSGGDWTAQLRNEDGLVDPERLSDALFGNIHRALDAVREDSMRRIDLSNVEFLLPDAGAIKLVKIADATVLQSGPGAVEFSSEADVDGRKVTVAASATRDVAAHRVTALNASVDLVSADETAAGAGKLGAIALKLTGAEGSGTNESRLTASLSSAGSVLDLGTRGLLPADVDVDATLVHGSNKIQVDRLLLKTGRSSFNFGGSIGPKPATGAAGEEPSYRYDLTSDGSTLAPSESPEPALTFLARIAGVYQTKSHKLVAEQIAVRSAASGEVLGTAAVAFVDGKAPGVNLALNVHDMPVSHVKQLWPWFSARNARLWVLDNLFGGRVVDADLQFQVVPDRLGNGVPLSAEEVFGRFQIEGSRFDTAGRIPPIRDAVGVVAFHGNDVDISLSSGTVYMPSGRTVAASNGTLAVKAANRPPVIGALDIDVEGEAPAVAELASYEPINAMRHVGFLPEDLSGSVTGHVRADIPLQSGVDTSKLDWLVSLDYTGLSLAKPFEGQTVTDADGSITVDPEKAVISAKAALNGIPAELDLIEPLADNGPARSRKVAMVLDDKVRAAAMPGLTPLLGGTVKVAIDKSGDGNQNVSADLTNARLDIPWAGWSKGAGVPANVTFVMTKAGDTTTLSDFSLDGKTFSIDGSIVLINGALSSAKFGKVTLNRGDDVAISVKRSGKGYAVDINGNALDARSLIKQFTSDVDTATKTTGTDNISVSADVEQLTGFHDEQLSNLKLDYSAAGSRVNGLKVSATASSGAAITISNTTGDGRRSLNVKSADAGAILRFLNVYEHMEGGSIMLALTGAGDGPMKGKVDTSNFFIVNEPKLASIVSTTPAGDNRSLNQAVKGNLDTSRVKFERGYAEIEKGSGYLKLANGVLRGPRIGTTFQGILYDQNNNMDMTGTFMPVYGLNRIFGELPIVGALLGNGRDRGLIGVTYRLRGNANKPVLDVNPLSVIAPGIFRSIFEYR
>NZ_CP033368.1|WP_038646379.1|4998011_4998479_+|peroxiredoxin
MADLDVGDLAPQFDLPRDGGGSLSLTASAGKPVVLYFYPQDDTTSCTQEAISFSQLKPEFEKAGAVVIGLSPDNVKKHDKFKSKYNLTVDLAADEERKVIEAYHLWVEKSMYGRKYMGVERATFLIGRDGRIARIWRKVRVKGHAEEVLEAVRAL
>NZ_CP033368.1|WP_064982729.1|4998529_4999660_-|GNAT-family-N-acetyltransferase
MNAPFVLAIPRTRTFEVVTSAARLAEIAPAWAALWQRAGGLVFQHPDWIAAWWRTTPHQQRRTLRIGLAWNGDRLDGVIALATFKRSGIRMLEWAAKDHSDYGDALVAPDSDPHVISRLWQHVFDQGGFDLVYLNRLLPDAGVRGLLDPASHLRPNHRSEISYRVVGPWQSGAEWFETLSKKARQNYRRGRKFMEEGGAVRFRLLGADDPREPVLARVAVLKRLWLARHGRASDLFDEGSPVLAALVSVLAELGLLRIFVLELDDTIIAVSINFEQHGTMMAFVTTYDPEYERASPGMVLMMDYIQWSLDRGLAKVDFLCGGEDFKRRFATQSARLSSMIGARGLRGHLAALADRVVHVTESWRAQPQPKAQTSDE
>NZ_CP033368.1|WP_019857742.1|4999656_5000655_-|sterol-desaturase-family-protein
MLGDLVGKILDKISGTSLLATGLLLLTAFVSALVAYWRTVEEKSWKEFFEFVIPHEVITHPSARADLLFWVTKKALMPFLMLPAGIVFVSAVGYATNWLFSTLFQFQPPLVQGPAGPVTVLIFTITMLLAYDISYYLYHVAQHRYPVLWELHKVHHSAEVMVGITKDRVHPLDELMNRAWDGLIVGVCFGIWSLISLNLVELTVFGVNVYVMRNILMMDFVRHTHFKISFGPLNNVILCPHWHQLHHSTDPRHYDKNFGLLFSFWDRLFGTLCVPKPDEDFKFGLVDRNVRDYQSLAGLYVMPLKRMWGHIARRIRPAKPRTVQSSEEGTRP
>NZ_CP033368.1|WP_019857741.1|5000962_5002267_+|M23-family-metallopeptidase
MNATGQSAVFGRRKEPHTVIIARGNEIRHFTIRPWLAAFIGSALAAIAIGYLLATSYLVLRDDLIGATTARQARMQQAYEDRISALRAQVDRITSRQLLDQQLMENKVSELIERQTQLSQRHGRLGPLLERAENEVGAAPAEDPAAAAKPDKHAEVTGSISQPARNYAVASLGADLGAADTRPFSLWSTRTDPLPSDTAADRADKLFVSINQSLKSIENEQLTRISTLADNAYKSADAIQQALQAAGLPVDSDFGKNESDVGGPLIPLDSSMIFDSKVKELDEALDTLDQLKKEARQLPLANPAPGHSVTSPFGVRTDPILGTAALHSGMDFRAPIGMAAKVTAPGIVTKAGWNGGYGRMVEVDHGNGFATRYGHLSEIDVTVGEKLDAGAIIGKTGSSGRSTGPHLHYEVRHNGEAIDPLRFLTVGRKVAQYL
>NZ_CP033368.1|WP_064982727.1|5002521_5003961_+|FAD-binding-oxidoreductase
MTIHGISPDVLTALEHVLGQSGVAADAADMAKYLVDWSGDHHGGALAVLKPASVAEVQAAVRLCGTLGLAMIPQGGNTGLVAGAIDIGTARGAVVISLERLNRIRLVDADNFILQADAGCILQHIKDAADEQDCLFPLALGAQGSCQIGGNAASNAGGVNVLRYGMARDLIVGLEAVLPDGALWNGFSGLRKDNRGYDLKQLFIGAEGTLGIITGVEMKLFPKPGRVETAYLGLPSFEAAISLFRRARRQCCDLISAFEIIGAECMELARLADPNIVAPVTTPVHVLIELSSSAAIDLRALLVDFLAGTMAEDLVTDAVLAESGAQARAFWAIREGLVEGQAKRGYHVRTDLSVRISDIPTLIAQARQFIELQHPGWISQAYGHAGDGNIHFNVLPPLDLAEPAARATGATITTGLYDIVNALGGSISAEHGIGRTRQRVYWAGMSAVQRRLVSTLKDALDPGGLMNPGCLFPATETSS
>NZ_CP033368.1|WP_038646368.1|5003957_5004701_+|FadR-family-transcriptional-regulator
MKQRLAAIGTVEALPHRVAAFLSREIESGDLNPGSLLPTEQQLSEKFGVSRNVVREAIAQLRADGMVEARQGIGSFVLAPEQRAAIRIDRETLKEGQNMERLFELRCILEAESAALAAERREQEHLDAIKGALDRMSGEERWEDGSIDADLLFHREIARATGNSYIHTFISFVCEQIRRSIYYARQTNPLHDLVEVNVGEHVRIYEALVAGDPAAAEAAMRAHIIGAANRVGVKLPSARGERTGGGK
>NZ_CP033368.1|WP_064982724.1|5004697_5005141_+|VOC-family-protein
MSMAVASITRISDVCLLVEDIERTVAFYVDKLGFRLRRRAEGFADFHGEGVTLAAWEIDHISQHAGVSKLRSPRHAHKVCVAVQLGAPDEIDRLHAELTAKGVPFYGPPENYVWNARCAYFTDPDDTLWELYAWLDGGPGDYHDDQP
>NZ_CP033368.1|WP_019857736.1|5005224_5006253_+|ABC-transporter-substrate-binding-protein
MNRRGFMKSGLAAVAMASGGMQLVLTPGAKAAGKVVIQYDWLMSNGQIGDIVAVANGYFKDAGLDVEFSPGGPNASTVPPVISGAAQLGQFSETPQLFAARASGVPVKIIACGFRTGPYALTSKASNPIKGVADLKGKKIGIQPTARFVLDEILAKNGMSASDLTVINVGFDKGPLVRGDVDAIGGWITNTQALSVVGDDRIDLLVRDLGLNSYADVYFATDAAIEKDPDTLAKFIGAVAKGWGWVHANPQEAVKKMVAAYPEMDLGWEEKTVNLVLRLSFDAATAKDGWGTFDPASIEEQLALLDKVGQYPNGRPKAADVYTTKILELSAADRPKLDAPAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP033368_3	3.1\|4993148\|26\|NZ_CP033368\|CRISPRCasFinder	4993148-4993173	26	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	141981-142006	6	0.769

1. spacer 3.1|4993148|26|NZ_CP033368|CRISPRCasFinder matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 6, identity: 0.769

aacctcccggttggcgcgcgatctga	CRISPR spacer
gcgcgcccggttggcgcgcgatctac	Protospacer
.  * *******************.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2935553 : 2986330

Orpheovirus(20.0%)

integrase,tRNA,transposase

attL 2952930:2952946|attR 2989061:2989077

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064986455.1\|2935553_2937050_+\|tRNA	histidine--tRNA ligase	A0A2I2L577	Orpheovirus	7.3e-29	26.3
WP_038644909.1\|2937228_2938350_+	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA
WP_038644911.1\|2938346_2939045_+	ATP phosphoribosyltransferase	NA	NA	NA	NA
WP_038644913.1\|2939147_2940920_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.5e-28	28.9
WP_064986457.1\|2940989_2942093_+	calcium:proton antiporter	NA	NA	NA	NA
WP_038644917.1\|2942140_2943049_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_064986459.1\|2943126_2943957_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_064986461.1\|2943969_2944494_+	hypothetical protein	NA	NA	NA	NA
WP_019860008.1\|2944546_2945218_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_064986462.1\|2945321_2946266_-	nucleoside hydrolase	NA	NA	NA	NA
WP_064986464.1\|2946369_2947383_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_064986466.1\|2947414_2948272_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019860004.1\|2948328_2949270_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_167470412.1\|2949320_2950073_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.9e-26	35.8
WP_019860002.1\|2950091_2951000_-	hydrogen peroxide-inducible genes activator	NA	NA	NA	NA
WP_064986469.1\|2951149_2953348_+	catalase/peroxidase HPI	NA	NA	NA	NA
2952930:2952946	attL	NA	NA	NA	NA
WP_019860000.1\|2953420_2954098_-	MIP family channel protein	NA	NA	NA	NA
WP_064986471.1\|2954399_2955689_+	RsmB/NOP family class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_064986472.1\|2955764_2956217_+	tryptophan-rich sensory protein	NA	NA	NA	NA
WP_023686843.1\|2956313_2956772_+	PaaI family thioesterase	NA	NA	NA	NA
WP_038644938.1\|2956771_2957437_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA
WP_010914447.1\|2957492_2959055_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_019859995.1\|2959371_2960625_+\|integrase	site-specific integrase	T1S9J3	Salmonella_phage	1.6e-109	49.6
WP_080643972.1\|2960605_2960860_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_027047176.1\|2961372_2962713_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_155249130.1\|2963549_2963690_+	hypothetical protein	NA	NA	NA	NA
WP_019859992.1\|2963755_2964100_-	hypothetical protein	NA	NA	NA	NA
WP_019859991.1\|2964096_2965185_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_155766988.1\|2965313_2965625_+	hypothetical protein	NA	NA	NA	NA
WP_155249221.1\|2965976_2971475_+	DUF3320 domain-containing protein	NA	NA	NA	NA
WP_019859987.1\|2973402_2973636_-	hypothetical protein	NA	NA	NA	NA
WP_167626435.1\|2973622_2974357_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_019859983.1\|2975062_2976748_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_171880415.1\|2978290_2979376_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_155249129.1\|2979449_2979773_+	hypothetical protein	NA	NA	NA	NA
WP_155249128.1\|2979893_2980058_-	hypothetical protein	NA	NA	NA	NA
WP_019859975.1\|2982627_2983047_+	hypothetical protein	NA	NA	NA	NA
WP_019859973.1\|2984224_2985418_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_019859972.1\|2985421_2986330_-\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	2.6e-29	29.9
2989061:2989077	attR	NA	NA	NA	NA

DBSCAN-SWA_2

4145311 : 4153566

uncultured_Mediterranean_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064984339.1\|4145311_4146115_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-32	33.1
WP_019858563.1\|4146111_4146876_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.1e-40	46.2
WP_015317533.1\|4147056_4147278_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	5.1e-08	65.9
WP_064984143.1\|4147309_4148071_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_019858559.1\|4148067_4148943_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	1.5e-50	46.3
WP_038647242.1\|4149047_4150352_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	1.2e-99	56.0
WP_019858557.1\|4150351_4151110_+	5'/3'-nucleotidase SurE	NA	NA	NA	NA
WP_064984145.1\|4151106_4151760_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.9e-18	38.5
WP_019858555.1\|4152018_4153566_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2K9VGT1	Pontimonas_phage	1.6e-10	37.4

DBSCAN-SWA_3

5024630 : 5061703

Sinorhizobium_phage(36.0%)

head,capsid,portal,protease,terminase,integrase

attL 5024680:5024694|attR 5066049:5066063

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064982691.1\|5024630_5025734_-	acyltransferase	A0A2H4JA46	uncultured_Caudovirales_phage	3.5e-12	30.2
5024680:5024694	attL	NA	NA	NA	NA
WP_064982689.1\|5025793_5027914_-	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_064982687.1\|5027965_5030248_-	hypothetical protein	A0A076G8H4	Sinorhizobium_phage	1.3e-194	51.6
WP_064982685.1\|5030232_5030640_-	hypothetical protein	A0A076G6J4	Sinorhizobium_phage	2.6e-21	40.7
WP_064982683.1\|5030647_5031280_-	hypothetical protein	A0A076G707	Sinorhizobium_phage	2.2e-67	60.9
WP_064982681.1\|5031283_5032039_-	hypothetical protein	A0A076GD29	Sinorhizobium_phage	4.3e-70	52.2
WP_064982677.1\|5032042_5035000_-	hypothetical protein	A0A076G7H2	Sinorhizobium_phage	3.2e-60	29.5
WP_147377474.1\|5035066_5035369_+	hypothetical protein	NA	NA	NA	NA
WP_064982673.1\|5035365_5035833_-	hypothetical protein	F8TVA8	EBPR_siphovirus	7.8e-22	37.3
WP_064982670.1\|5035915_5036143_-	hypothetical protein	NA	NA	NA	NA
WP_064982668.1\|5036139_5037081_-	hypothetical protein	K4JUH2	Caulobacter_phage	4.3e-11	26.9
WP_010915693.1\|5037125_5037566_-	hypothetical protein	NA	NA	NA	NA
WP_064982666.1\|5037565_5038207_-	hypothetical protein	F8TVA4	EBPR_siphovirus	7.7e-20	32.7
WP_064982665.1\|5038206_5038584_-	hypothetical protein	NA	NA	NA	NA
WP_064982663.1\|5038580_5039198_-	hypothetical protein	I3UM02	Rhodobacter_phage	1.4e-07	39.0
WP_064982661.1\|5039201_5039564_-	hypothetical protein	A0A1B1IUW2	uncultured_Mediterranean_phage	9.6e-12	40.3
WP_064982659.1\|5039605_5039851_-	hypothetical protein	NA	NA	NA	NA
WP_081296001.1\|5039914_5041213_-\|capsid	phage major capsid protein	A0A2H4JD98	uncultured_Caudovirales_phage	2.8e-101	55.9
WP_064982658.1\|5041228_5041921_-\|head,protease	HK97 family phage prohead protease	A0A0U2BX10	Paracoccus_phage	2.5e-48	49.1
WP_081296000.1\|5041930_5043163_-\|portal	phage portal protein	M4QP41	Tetraselmis_viridis_virus	3.1e-78	41.4
WP_081295999.1\|5043159_5044956_-\|terminase	terminase large subunit	A0A2K5B285	Erysipelothrix_phage	6.4e-80	34.6
WP_064982654.1\|5044958_5045585_-\|terminase	phage terminase small subunit P27 family	NA	NA	NA	NA
WP_064983514.1\|5046162_5046711_-	transcriptional antiterminator NusG	NA	NA	NA	NA
WP_064982652.1\|5046817_5047948_-	helix-turn-helix domain-containing protein	A0A291AUK7	Sinorhizobium_phage	6.9e-48	38.5
WP_064982650.1\|5047944_5048418_-	hypothetical protein	NA	NA	NA	NA
WP_064982647.1\|5048414_5048975_-	hypothetical protein	A0A291AUJ2	Sinorhizobium_phage	3.8e-23	40.7
WP_064982646.1\|5048971_5049259_-	hypothetical protein	NA	NA	NA	NA
WP_064982644.1\|5049255_5049543_-	hypothetical protein	NA	NA	NA	NA
WP_167470450.1\|5049539_5049698_-	hypothetical protein	NA	NA	NA	NA
WP_064982642.1\|5049694_5050126_-	hypothetical protein	NA	NA	NA	NA
WP_064982640.1\|5050122_5052771_-	DNA methylase N-4	J7I4L6	Pseudomonas_phage	9.2e-269	53.0
WP_064982638.1\|5052767_5053970_-	hypothetical protein	M4MB46	Vibrio_phage	1.4e-19	37.2
WP_064982636.1\|5053969_5054890_-	DUF2303 family protein	A0A291AUR3	Sinorhizobium_phage	2.7e-66	44.0
WP_120145524.1\|5054922_5055291_-	hypothetical protein	NA	NA	NA	NA
WP_064982633.1\|5055287_5055767_-	hypothetical protein	NA	NA	NA	NA
WP_044550287.1\|5055766_5056252_-	hypothetical protein	A0A291AUJ7	Sinorhizobium_phage	2.5e-23	40.8
WP_064982631.1\|5056379_5056901_-	hypothetical protein	NA	NA	NA	NA
WP_064982629.1\|5056897_5057137_-	hypothetical protein	A0A0A8IN86	Aurantimonas_phage	1.6e-10	42.5
WP_064982627.1\|5057293_5057923_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_064983512.1\|5057919_5058171_-	hypothetical protein	NA	NA	NA	NA
WP_064982625.1\|5058357_5058582_+	hypothetical protein	NA	NA	NA	NA
WP_064982623.1\|5058587_5058833_+	hypothetical protein	NA	NA	NA	NA
WP_064982621.1\|5058990_5059371_+	hypothetical protein	NA	NA	NA	NA
WP_064982619.1\|5059373_5059742_+	DUF4031 domain-containing protein	R9TSA1	Rhizobium_phage	1.7e-19	61.5
WP_064982617.1\|5059741_5060116_+	hypothetical protein	NA	NA	NA	NA
WP_064982616.1\|5060112_5060454_+	DUF4326 domain-containing protein	A0A088FBM0	Mycobacterium_phage	1.4e-17	46.3
WP_081295996.1\|5061043_5061703_+\|integrase	site-specific integrase	A0A240F4W2	Ochrobactrum_phage	1.4e-40	41.7
5066049:5066063	attR	NA	NA	NA	NA

DBSCAN-SWA_4

5845454 : 5867890

EBPR_siphovirus(16.67%)

head,capsid,portal,terminase,integrase,tail

attL 5848491:5848506|attR 5869511:5869526

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064983106.1\|5845454_5845781_-\|head	phage head closure protein	NA	NA	NA	NA
WP_064983109.1\|5845782_5846082_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_064983110.1\|5846074_5846560_-	hypothetical protein	NA	NA	NA	NA
WP_064983112.1\|5846562_5846910_-\|head,tail	phage gp6-like head-tail connector protein	B5WZS4	Pseudomonas_phage	9.9e-14	40.5
WP_064983114.1\|5846911_5847913_-	hypothetical protein	B6DZX7	Stx2-converting_phage	4.0e-15	47.8
WP_064983116.1\|5847912_5849328_-\|portal	phage portal protein	F8TVA0	EBPR_siphovirus	4.9e-144	62.0
5848491:5848506	attL	NA	NA	NA	NA
WP_167470404.1\|5849320_5849488_-	hypothetical protein	NA	NA	NA	NA
WP_064983118.1\|5849539_5850529_-	hypothetical protein	NA	NA	NA	NA
WP_064983119.1\|5850525_5851338_-	hypothetical protein	A0A1B1ITU6	uncultured_Mediterranean_phage	2.6e-17	25.4
WP_064983121.1\|5851334_5851544_-	hypothetical protein	NA	NA	NA	NA
WP_064983123.1\|5851540_5852149_-	hypothetical protein	NA	NA	NA	NA
WP_147377450.1\|5852145_5852499_-	hypothetical protein	NA	NA	NA	NA
WP_064983126.1\|5852636_5853284_-	hypothetical protein	F8TV98	EBPR_siphovirus	2.4e-21	40.0
WP_167470405.1\|5853271_5853826_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_064983130.1\|5853831_5854419_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_064983132.1\|5854419_5855193_-	hypothetical protein	K4JSB7	Caulobacter_phage	2.7e-19	41.8
WP_147377443.1\|5855193_5855520_-	hypothetical protein	NA	NA	NA	NA
WP_081296026.1\|5855516_5856224_-	hypothetical protein	A0A2P0VNH9	Tetraselmis_virus	4.8e-47	44.2
WP_064983137.1\|5856220_5856706_-	hypothetical protein	M4QNT5	Tetraselmis_viridis_virus	3.0e-16	44.4
WP_064983139.1\|5856807_5857131_-	hypothetical protein	NA	NA	NA	NA
WP_064983141.1\|5857193_5859161_-\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	2.0e-135	43.4
WP_081296027.1\|5859185_5861051_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	3.9e-173	54.8
WP_147377444.1\|5861013_5861412_-	hypothetical protein	NA	NA	NA	NA
WP_120145478.1\|5861937_5862150_-	hypothetical protein	NA	NA	NA	NA
WP_064983146.1\|5862234_5862441_-	hypothetical protein	NA	NA	NA	NA
WP_064983148.1\|5862440_5863160_-	hypothetical protein	A0A141GF38	Brucella_phage	1.6e-13	31.0
WP_064983150.1\|5863156_5863396_-	hypothetical protein	NA	NA	NA	NA
WP_064983152.1\|5863392_5863839_-	hypothetical protein	NA	NA	NA	NA
WP_064983154.1\|5863835_5864219_-	hypothetical protein	NA	NA	NA	NA
WP_064983156.1\|5864215_5864410_-	hypothetical protein	NA	NA	NA	NA
WP_064983158.1\|5864406_5864742_-	hypothetical protein	NA	NA	NA	NA
WP_081296028.1\|5864738_5865041_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_064983163.1\|5865245_5865920_+	hypothetical protein	NA	NA	NA	NA
WP_064983165.1\|5865919_5866363_+	hypothetical protein	NA	NA	NA	NA
WP_147377445.1\|5866359_5866644_+	hypothetical protein	NA	NA	NA	NA
WP_155772697.1\|5866640_5866814_+	hypothetical protein	NA	NA	NA	NA
WP_167470406.1\|5867017_5867890_+\|integrase	tyrosine-type recombinase/integrase	A0A291AUF0	Sinorhizobium_phage	3.8e-38	33.8
5869511:5869526	attR	NA	NA	NA	NA

DBSCAN-SWA_5

6393247 : 6471039

Bacillus_phage(14.29%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019856465.1\|6393247_6393805_-\|transposase	transposase	A0A0K2CZ57	Paenibacillus_phage	6.5e-07	29.1
WP_155249076.1\|6393804_6394080_-	hypothetical protein	NA	NA	NA	NA
WP_019856462.1\|6394724_6395042_-	ferredoxin III, nif-specific	NA	NA	NA	NA
WP_019856461.1\|6395295_6395955_-	chitooligosaccharide deacetylase NodB	NA	NA	NA	NA
WP_027046519.1\|6396640_6398110_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_019856459.1\|6399533_6400748_-	hypothetical protein	NA	NA	NA	NA
WP_027046517.1\|6400961_6402983_-	carbamoyltransferase	E3SL39	Synechococcus_phage	5.7e-53	27.9
WP_019856457.1\|6403248_6404037_-	ABC transporter permease	NA	NA	NA	NA
WP_080643697.1\|6404040_6405057_-	nodulation factor ABC transporter ATP-binding protein NodI	W6JKT0	Anomala_cuprea_entomopoxvirus	3.3e-25	27.4
WP_019856455.1\|6405112_6406387_-	chitooligosaccharide synthase NodC	NA	NA	NA	NA
WP_027046516.1\|6406442_6407036_-	NodA family N-acyltransferase	NA	NA	NA	NA
WP_019856454.1\|6407824_6408439_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_027046515.1\|6409488_6410670_-	5-demethoxyubiquinol-8 5-hydroxylase UbiM	NA	NA	NA	NA
WP_155249075.1\|6412034_6412199_+	hypothetical protein	NA	NA	NA	NA
WP_155249074.1\|6412233_6412392_+	hypothetical protein	NA	NA	NA	NA
WP_019856452.1\|6412509_6413595_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_019856451.1\|6413627_6415784_+	peptidase domain-containing ABC transporter	W8CYL7	Bacillus_phage	1.6e-40	27.9
WP_027046513.1\|6415938_6417669_-	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	8.7e-10	30.0
WP_019856449.1\|6417748_6418168_-	DUF2958 domain-containing protein	NA	NA	NA	NA
WP_064982001.1\|6418351_6419314_-	ArdC family protein	A0A1B1IRD0	uncultured_Mediterranean_phage	1.2e-48	41.6
WP_019863563.1\|6421881_6422178_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	5.4e-21	55.4
WP_019863562.1\|6422242_6423907_+	chaperonin GroEL	A0A240F779	uncultured_virus	4.7e-170	59.8
WP_080644019.1\|6424243_6424720_-	ProQ/FinO family protein	NA	NA	NA	NA
WP_051112871.1\|6425027_6426308_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_019863557.1\|6426729_6429477_+	hypothetical protein	NA	NA	NA	NA
WP_019863556.1\|6430100_6431489_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_019863554.1\|6432188_6434264_-	recombinase family protein	NA	NA	NA	NA
WP_155249177.1\|6434247_6434421_-	hypothetical protein	NA	NA	NA	NA
WP_019863552.1\|6436213_6437242_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_019863550.1\|6438221_6438797_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA
WP_051112870.1\|6438814_6440122_+	diaminobutyrate--2-oxoglutarate transaminase	NA	NA	NA	NA
WP_019863548.1\|6440132_6440525_+	ectoine synthase	NA	NA	NA	NA
WP_019863547.1\|6440712_6442098_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_027047825.1\|6442257_6443274_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	4.2e-20	32.9
WP_155249176.1\|6443594_6444500_+	6-bladed beta-propeller	NA	NA	NA	NA
WP_027047824.1\|6444640_6445414_+	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	W5SAS9	Pithovirus	6.4e-13	24.7
WP_027047823.1\|6445510_6446365_+	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_019863541.1\|6446522_6447182_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
WP_019863540.1\|6447181_6447841_+	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
WP_019863539.1\|6447846_6448623_+	ectoine utilization protein EutA	NA	NA	NA	NA
WP_019863538.1\|6448805_6449984_+	ectoine hydrolase DoeA	NA	NA	NA	NA
WP_019863537.1\|6449988_6450993_+	N-alpha-acetyl diaminobutyric acid deacetylase DoeB	NA	NA	NA	NA
WP_155249175.1\|6451087_6451351_+	hypothetical protein	NA	NA	NA	NA
WP_019863536.1\|6451356_6451701_-	hypothetical protein	NA	NA	NA	NA
WP_019863535.1\|6451702_6452806_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_155249174.1\|6452834_6453653_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	5.2e-13	32.1
WP_080643887.1\|6453739_6454084_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_027047822.1\|6454349_6456536_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_167626428.1\|6458364_6458646_+	hypothetical protein	NA	NA	NA	NA
WP_051112868.1\|6459275_6460421_-	ImmA/IrrE family metallo-endopeptidase	B6SBZ6	Clostridium_virus	1.2e-39	31.4
WP_155249173.1\|6460433_6461159_-	hypothetical protein	NA	NA	NA	NA
WP_019863526.1\|6461183_6461414_-	hypothetical protein	NA	NA	NA	NA
WP_019863525.1\|6461413_6462493_-	macro domain-containing protein	A0A0B4N0V6	Escherichia_phage	1.1e-21	39.9
WP_027047818.1\|6463408_6464446_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_019863523.1\|6465410_6466595_+	acyltransferase	A0A0S2SXM2	Bacillus_phage	8.6e-17	31.6
WP_032920917.1\|6468464_6469433_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_027047816.1\|6470073_6471039_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA

DBSCAN-SWA_6

6488167 : 6620946

Brevibacillus_phage(15.38%)

protease,integrase,transposase

attL 6533038:6533055|attR 6582548:6582636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019863503.1\|6488167_6489136_-\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_027047811.1\|6490094_6490499_-	hypothetical protein	NA	NA	NA	NA
WP_019863500.1\|6490495_6491683_-	ThiF family adenylyltransferase	NA	NA	NA	NA
WP_019863499.1\|6491657_6492335_-	multiubiquitin domain-containing protein	NA	NA	NA	NA
WP_032921561.1\|6492462_6492669_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_019863497.1\|6492665_6493313_+	hypothetical protein	NA	NA	NA	NA
WP_032920912.1\|6493328_6493856_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_019863494.1\|6493852_6494809_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_019863493.1\|6495677_6495887_+	hypothetical protein	NA	NA	NA	NA
WP_019863490.1\|6496178_6496634_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_019863489.1\|6498225_6499101_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_019863488.1\|6499275_6499647_+\|transposase	transposase	NA	NA	NA	NA
WP_019863487.1\|6499877_6500570_+	OmpW family protein	NA	NA	NA	NA
WP_027047808.1\|6502202_6503678_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_019863485.1\|6504128_6506459_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	NA	NA	NA	NA
WP_020629161.1\|6507180_6507429_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_019863483.1\|6507700_6508003_-	DUF982 domain-containing protein	NA	NA	NA	NA
WP_019863481.1\|6508247_6508712_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	2.3e-26	54.4
WP_080643883.1\|6508970_6509570_-	CspA family cold shock protein	A0A1W6JNX5	Morganella_phage	6.7e-10	45.9
WP_027047806.1\|6509947_6510940_-	adenosine kinase	NA	NA	NA	NA
WP_019863479.1\|6511040_6512216_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	5.6e-117	56.2
WP_019863478.1\|6512273_6513611_-	serine hydroxymethyltransferase	G9I092	Helicoverpa_zea_nudivirus	1.2e-83	42.2
WP_019863476.1\|6513806_6514346_+	hypothetical protein	NA	NA	NA	NA
WP_019863475.1\|6514572_6514782_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_019863474.1\|6514939_6515137_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_019863473.1\|6515201_6515417_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_010913773.1\|6515719_6515929_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_019863472.1\|6516054_6516306_+	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_027047805.1\|6516336_6516765_-	DUF2285 domain-containing protein	NA	NA	NA	NA
WP_019863470.1\|6517866_6518592_-	LuxR family transcriptional regulator	NA	NA	NA	NA
WP_019863469.1\|6519259_6520666_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_019863468.1\|6520828_6521326_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_019863467.1\|6521394_6522939_-	fumarate hydratase	NA	NA	NA	NA
WP_020629160.1\|6522945_6524379_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_019863465.1\|6524576_6525503_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_019863464.1\|6525678_6526614_-	CoA ester lyase	NA	NA	NA	NA
WP_019863463.1\|6526734_6527886_-	CoA transferase	NA	NA	NA	NA
WP_019863462.1\|6527901_6529155_-	methylaspartate ammonia-lyase	NA	NA	NA	NA
WP_019863461.1\|6529384_6529795_-	M24 family metallopeptidase	NA	NA	NA	NA
WP_019863460.1\|6530010_6530319_-\|transposase	transposase	NA	NA	NA	NA
WP_080643881.1\|6530744_6530948_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_019863459.1\|6531247_6532243_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA
WP_167626459.1\|6532983_6533580_-	M24 family metallopeptidase	NA	NA	NA	NA
6533038:6533055	attL	NA	NA	NA	NA
WP_167626460.1\|6534803_6535331_-	aminopeptidase P family N-terminal domain-containing protein	NA	NA	NA	NA
6533038:6533055	attL	NA	NA	NA	NA
WP_019863458.1\|6536387_6537974_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019863457.1\|6538091_6538868_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_080643878.1\|6539825_6540338_-\|transposase	transposase	U5P429	Shigella_phage	3.1e-16	34.8
WP_051112864.1\|6540285_6540690_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_080644017.1\|6540686_6541052_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_019863450.1\|6542967_6543168_-	hypothetical protein	NA	NA	NA	NA
WP_019863416.1\|6544057_6545047_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_019863417.1\|6545043_6545970_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_019863418.1\|6545969_6547184_-\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	5.7e-08	22.5
WP_171880434.1\|6547375_6547807_+\|transposase	transposase	A0A220NQR7	Corynebacterium_phage	1.7e-15	37.4
WP_019863449.1\|6547819_6548005_+	hypothetical protein	NA	NA	NA	NA
WP_155249248.1\|6550058_6550421_+\|transposase	transposase	NA	NA	NA	NA
WP_019863444.1\|6550417_6550768_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_019863443.1\|6550840_6552424_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	1.2e-98	40.4
WP_019863442.1\|6552420_6553023_+	UPF0149 family protein	NA	NA	NA	NA
WP_019863440.1\|6553355_6553817_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_019863439.1\|6554040_6555204_-	aminopeptidase P family protein	NA	NA	NA	NA
6554152:6554169	attR	NA	NA	NA	NA
WP_019863438.1\|6555455_6557123_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.9e-18	31.8
6554152:6554169	attR	NA	NA	NA	NA
WP_019863437.1\|6557122_6557947_-	ABC transporter permease	NA	NA	NA	NA
WP_019863436.1\|6557957_6558917_-	ABC transporter permease	NA	NA	NA	NA
WP_019863435.1\|6558929_6560516_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019863433.1\|6561454_6562876_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_019863432.1\|6562940_6564335_-	MmgE/PrpD family protein	NA	NA	NA	NA
WP_019863431.1\|6565837_6567073_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_019863429.1\|6568570_6569497_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_019863428.1\|6569696_6570116_+	DUF2267 domain-containing protein	NA	NA	NA	NA
WP_171880405.1\|6570705_6572391_+	GMC family oxidoreductase N-terminal domain-containing protein	M1PW31	Moumouvirus	2.2e-26	24.1
WP_019863424.1\|6574195_6574429_-	hypothetical protein	NA	NA	NA	NA
WP_019863422.1\|6574914_6575754_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_027047800.1\|6577010_6577754_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_019863418.1\|6579391_6580606_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	5.7e-08	22.5
WP_019863417.1\|6580605_6581532_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_019863416.1\|6581528_6582518_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_019863413.1\|6583288_6584638_-	diaminobutyrate--2-oxoglutarate transaminase	NA	NA	NA	NA
WP_167626461.1\|6585830_6586271_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_080643874.1\|6586446_6586722_+	hypothetical protein	NA	NA	NA	NA
WP_019863410.1\|6586832_6588488_-	MFS transporter	NA	NA	NA	NA
WP_080643873.1\|6589428_6590226_-	polysaccharide deacetylase	NA	NA	NA	NA
WP_019863407.1\|6590466_6591870_-	aspartate aminotransferase family protein	NA	NA	NA	NA
WP_019863406.1\|6591883_6593362_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_019863405.1\|6594276_6595455_-	M24 family metallopeptidase	NA	NA	NA	NA
WP_019863402.1\|6596920_6598069_-	M20 family metallopeptidase	NA	NA	NA	NA
WP_020629152.1\|6598106_6599285_-	aminotransferase class V-fold PLP-dependent enzyme	A0A2K9L679	Tupanvirus	3.9e-09	21.6
WP_019863399.1\|6600130_6600598_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_027047798.1\|6602318_6603752_+	amidase	NA	NA	NA	NA
WP_019863397.1\|6604004_6606155_-	hypothetical protein	NA	NA	NA	NA
WP_019863396.1\|6606393_6607740_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_019863382.1\|6611634_6612864_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_155249247.1\|6613044_6613809_-	ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA	G9BWD6	Planktothrix_phage	4.4e-30	38.5
WP_019863390.1\|6613940_6614609_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA
WP_019863389.1\|6614605_6615277_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA
WP_019863388.1\|6615335_6616208_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA
WP_155249166.1\|6616729_6617581_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_019863384.1\|6617551_6618373_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_019863382.1\|6619716_6620946_+\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP033368

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection