CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053044	Proteus cibarius strain HNCF43W chromosome, complete genome	4 crisprs	csa3,WYL,DinG,DEDDh,RT,cas3,TnsE_C	0	1	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053044_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053044_1

251868-251941

Orphan

Consensus_repeat	Method
CACGGTGAAGAAGGCGGATGCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053044_1

>merge|NZ_CP053044|1|251868-251941|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTGTGGCGGTGGCCACGGTCACGGTCATTCACACGGTGAAGAAGGTGGATGCTG

>NZ_CP053044|1|1|251868-251941|CRISPRCasFinder
CACGGTGAAGAAGGCGGATGCTG	TGGCGGTGGCCACGGTCACGGTCATTCA
CACGGTGAAGAAGGTGGATGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053044.1\|WP_075674196.1\|253492_254374_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP053044.1\|WP_075673320.1\|239643_240504_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|183195
NZ_CP053044.1\|WP_075673318.1\|242297_244043_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP053044.1\|WP_075673319.1\|240653_242198_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP053044.1\|WP_159242120.1\|244583_246272_-\|Tar-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP053044.1\|WP_083629137.1\|256135_256504_+\|sulfurtransferase-complex-subunit-TusC	unknown	unknown	gnl\|CDD\|178930
NZ_CP053044.1\|WP_004246897.1\|257429_257900_+\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP053044.1\|WP_075674195.1\|252641_253394_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|236791
NZ_CP053044.1\|WP_159242118.1\|256535_256829_+\|sulfurtransferase-complex-subunit-TusB	unknown	unknown	gnl\|CDD\|184101
NZ_CP053044.1\|WP_075674194.1\|249210_251064_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	unknown	unknown	gnl\|CDD\|179625
NZ_CP053044.1\|WP_075674193.1\|248659_249205_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	unknown	unknown	gnl\|CDD\|179895
NZ_CP053044.1\|WP_075673322.1\|237245_238226_-\|hydrolase	unknown	unknown	gnl\|CDD\|182883
NZ_CP053044.1\|WP_156734278.1\|254520_254679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_075674197.1\|255740_256136_+\|sulfurtransferase-complex-subunit-TusD	unknown	unknown	gnl\|CDD\|178928
NZ_CP053044.1\|WP_036914399.1\|251077_251281_+\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|226060
NZ_CP053044.1\|WP_023583298.1\|252088_252307_-\|SlyX-family-protein	unknown	unknown	gnl\|CDD\|179472
NZ_CP053044.1\|WP_159242119.1\|246603_248538_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236729
NZ_CP053044.1\|WP_004236497.1\|256956_257331_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP053044.1\|WP_075673321.1\|238325_238931_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP053044.1\|WP_023583301.1\|255026_255731_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225512

Protein	Function_ID	Function_description	E-value
NZ_CP053044.1\|WP_075674196.1\|253492_254374_-\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	6.93127e-08
NZ_CP053044.1\|WP_075673320.1\|239643_240504_+\|SIS-domain-containing-protein	gnl\|CDD\|183195	PRK11557, PRK11557, MurR/RpiR family transcriptional regulator.	3.68404e-85
NZ_CP053044.1\|WP_075673318.1\|242297_244043_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	7.15924e-112
NZ_CP053044.1\|WP_075673319.1\|240653_242198_+\|PAS-domain-containing-methyl-accepting-chemotaxis-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	2.00704e-74
NZ_CP053044.1\|WP_159242120.1\|244583_246272_-\|Tar-ligand-binding-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	1.14831e-112
NZ_CP053044.1\|WP_083629137.1\|256135_256504_+\|sulfurtransferase-complex-subunit-TusC	gnl\|CDD\|178930	PRK00211, PRK00211, sulfurtransferase complex subunit TusC.	8.05796e-60
NZ_CP053044.1\|WP_004246897.1\|257429_257900_+\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	4.22371e-104
NZ_CP053044.1\|WP_075674195.1\|252641_253394_+\|FKBP-type-peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|236791	PRK10902, PRK10902, FKBP-type peptidyl-prolyl cis-trans isomerase; Provisional.	1.65204e-140
NZ_CP053044.1\|WP_159242118.1\|256535_256829_+\|sulfurtransferase-complex-subunit-TusB	gnl\|CDD\|184101	PRK13510, PRK13510, sulfurtransferase complex subunit TusB.	1.44498e-37
NZ_CP053044.1\|WP_075674194.1\|249210_251064_+\|glutathione-regulated-potassium-efflux-system-protein-KefB	gnl\|CDD\|179625	PRK03659, PRK03659, glutathione-regulated potassium-efflux system protein KefB; Provisional.	0
NZ_CP053044.1\|WP_075674193.1\|248659_249205_+\|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG	gnl\|CDD\|179895	PRK04930, PRK04930, glutathione-regulated potassium-efflux system ancillary protein KefG; Provisional.	6.32408e-116
NZ_CP053044.1\|WP_075673322.1\|237245_238226_-\|hydrolase	gnl\|CDD\|182883	PRK10985, PRK10985, putative hydrolase; Provisional.	0
NZ_CP053044.1\|WP_075674197.1\|255740_256136_+\|sulfurtransferase-complex-subunit-TusD	gnl\|CDD\|178928	PRK00207, PRK00207, sulfurtransferase complex subunit TusD.	2.10189e-74
NZ_CP053044.1\|WP_036914399.1\|251077_251281_+\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|226060	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].	6.65397e-29
NZ_CP053044.1\|WP_023583298.1\|252088_252307_-\|SlyX-family-protein	gnl\|CDD\|179472	PRK02793, PRK02793, phi X174 lysis protein; Provisional.	1.65095e-19
NZ_CP053044.1\|WP_159242119.1\|246603_248538_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|236729	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional.	0
NZ_CP053044.1\|WP_004236497.1\|256956_257331_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.89954e-89
NZ_CP053044.1\|WP_075673321.1\|238325_238931_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	2.77673e-28
NZ_CP053044.1\|WP_023583301.1\|255026_255731_+\|transcriptional-regulator	gnl\|CDD\|225512	COG2964, COG2964, Uncharacterized protein conserved in bacteria [Function unknown].	5.86016e-99

>NZ_CP053044.1|WP_036914399.1|251077_251281_+|YheV-family-putative-metal-binding-protein
MSATRKRFIAGAVCPHCQAQDTLKMWREDKVDIVECAKCGHQQRQTEGEVNSLVRENEQVIGIFTPQ
>NZ_CP053044.1|WP_075674194.1|249210_251064_+|glutathione-regulated-potassium-efflux-system-protein-KefB
MEDNWMIKAVLFFLCAAVIMVPIAQRLKIGAVLGYLIAGIAIGPWGLGLFKDVDNILHFAELGVVFLMFLIGLELNPAKLWELRRAIFGVGSMQVVLTASIFSGLILVFTSFSWQAAVIGGLGIAMSSTAMALQLMNEKGMNHNEGGQLGFAVLLFQDMAVIPILAVIPLLAGETASSDWYRIGVKVAAFAGLLICGRYLLRPLLRLVVKSGVREVFTAAALLVVLGAAIFMETLGFSMAMGTFIAGVLLADSEYRHELEISIEPFKGLLLGLFFISVGMSLDIGILWRYLPQVLLGVLVLVIVKALILYSIAWLARLRFSTRLQFSAVLSQGGEFAFVVFSTSMAMGVLDSQQMALLLVVVTLSMMTTPLVMQMTDAVFARRYNEAKTDEQPFVENNHPEVILVGFGRMGQVVGRLLMANKINVTVLEHDVGSISTMRKYGYKVYYGDATDLNLLRAAGAEHAKTIVITCNEPEATMEIVHLCQHHFPNLHIIARARGRVEAHELLKAGVTDFSRETFSSALELGRKTLIELGMHPHQAYRAQQHFRRLDINLLRKLVDESPEEVSNVSRVKEARRELEELFSEEIRQEHHQPDIWDESLTEDIPQIHKEKKSIDK
>NZ_CP053044.1|WP_075674193.1|248659_249205_+|glutathione-regulated-potassium-efflux-system-ancillary-protein-KefG
MSNASNVLLVYVHPEPRQSIANKALLKAVRDLENITIHDLYATYPDFFIDIHHEQSLLCKHQVIVFQFPLQTYSCPALLKEWQDRVLTRPFANKAGRAQLKGKSFRCVITTGEPEQAYQHDGKNHYTLTELLRPFELMAEMCGMRWLSPMIVYSARQQSKTTLTHIGEAYRHWLSAPLEGE
>NZ_CP053044.1|WP_159242119.1|246603_248538_-|ABC-transporter-ATP-binding-protein
MIVFSSLQIRRGVRVLLDNASATINPGQKIGLVGKNGCGKTTLLSLLKGELQSEAGNVTYPSTWSMAWVNQETPALDVPAIDYVIDGDREYRQLEQRLQKANEINDGHAIALIHGQLDAINAWTIQSRAATLLNGLGFSQQQLNEPVKSFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYTGTLILISHDRDFLDPIVDKILHIEQEKIFEYSGNYSSFEMQRATKLAQQQALFENQQAKIAHLQSFIDRFKAKATKAKQAQSRVKMLERMEKVAPAHLDNPFHFSFRQPESLPNPLLSMEKVSAGYGEKIILNDIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGEIEPLQGKLALSKGIKLGYFAQHQLEFLRSDESALQHLTRLAPKETEQKLRDYLGGFGFHGDKVTDACGQFSGGEKARLVLSLLVWQRPNLLLMDEPTNHLDLDMRQALTQALISFEGAIVVVSHDRHLLRSTTDDLYLVHDGQVEPFDGDLDDYQQWLVDQNRQETQANKSQQDNDNITTTTNLSAQDKKEQKRKEAEFRQQTQPLRKKLTTLESKMDKLSQELSDIETALSDSGIYDTSRKNELSDCLNRQGVAKSALEEVEMEWMELQETLEEMTNTFEAQ
>NZ_CP053044.1|WP_159242120.1|244583_246272_-|Tar-ligand-binding-domain-containing-protein
MLKRIKISQGLMCVLTLFCIIQIISGVQSIHDAYQTQNTLKRISYSFDQLRTMDNTYAELNTLRTDIIAQAFNYISNPQTEDANVTAFMQTMPERKAQVDALMNEYVELSAQTGFDQQRMAQIKQLYQKSRADLDLLAQYLSERNTNAVRLILKSPANTNFTNSLYEATDFITDEVVNPSVIEAEGNYHSMLWIASLFMGIFLIFTTLVLIWIRKYIIVRINQMIIYQEAIAKGNLVSRIDSDVSGKTEIDQLMLGLQQMRAQLKEMVSSIRNTSATIYTGVQEIAAGNNDLSSRTEEQASALEETASSMEQMTATIRNNTESAREVTELVMSTADIAVQGGEHSNKMVMTMTDIADRSQKIGEITAVIDDIAFQTNILALNAAVEAARAGEQGRGFSVVASEVRNLAQRSAEAAKEIKELIESTILRVRQGNDLVEQVSLSMGEIVTSVNHVSGSMKEILSASEEQTRGIAQISLAVNEMDKATQQNAAMVEQSTAASATLSEQAGMLDTIVNTFKVEHEKVAPTKTKLPTFSAKSQDTETLKTPTIKTNNHETDDNWESF
>NZ_CP053044.1|WP_075673318.1|242297_244043_-|HAMP-domain-containing-protein
MLKRIKISNGLMFILILFCAIQLFSGAMSIRDASLTNKRISQLANGFEQIKTMDYGYAELNKLREDMLNVMFEAHLTPDIAESKISDFISSYPKRKQEITRIITAYFTATEEADFDPEKIESMKKLFNRVLYDLDQLVSCLEIRDYYGFQSLYAHNTNDRFTQSLYEATDYLSDNVVTHAIKAAQGNYERTLVLAFVFMFIFILFTVLVVLWIRRNIVLRINQIVDYMSKISQGNLLENKDVTVKGNNEIDQLITGIQYMRTELSLIVNAIRGTSHHIYTGVQELSAGNTDLSCRTEEQASALEETASSMEQLTATVRNNTESAREVSHLISQTSNIASKGGDVTNRMVKTMTDIADSSQKIGEITAVINSIAFQTNILSLNAAVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKELIDASISRVRHGNDLVEQVSISMGEILTSVKHVEDSMTEILSASEEQTRGITQVSLAVTEMDKATQQNATMVEQSSAVASLLTEEAGNLEQIVEQFKTAESEQFNKKTQHKVIEKQFSSEKSQHTKDENMKNIAKDDVKERKSAKGTATVNDGEDDDWTSF
>NZ_CP053044.1|WP_075673319.1|240653_242198_+|PAS-domain-containing-methyl-accepting-chemotaxis-protein
MRNNQPVTQREYPVSENATLMSTTDLDGNIIYANEDFVEASGFSVEELVGQPHNIVRHPDIPSAVFKDMWKTLKQGEVWTGIVKNRRKNGDYYWVRANITPIIRQGKIQSFMSVRTSARKEEIAQASALYAAFNQGKYPSHMFLKGAFVYKGWQRWRSWNQTISLKKRLRLFILLPLPFMLLSAWFAGLSGYALFMHMAILLVLLMANERILYFQIVKPIRLLNEQANRVATGDEHNVTYINRIDEVGMTQRSVNQLGRMFRWLVSDVSHQIHQVDISCDQLAAGNRDLYVRTEQTASNVEATASTMNELTTAVSSNSETAGQANNLSNVTCEAAIKGGNAMDNIVNTMNDIAKSSDRISNIIGVIDSIAFQTNILALNASVEAARAGEQGRGFSVVATEVRELAQRSAEAAKEIKTLISASSSNIKVGSKQVNETVGTMEDIVVHVKNVTDLIGEISLASSEQSAGLKELGRAVEKLESITHENANYVSKASMISGEMKVQTNYLVSAINVFH
>NZ_CP053044.1|WP_075673320.1|239643_240504_+|SIS-domain-containing-protein
MPTLTKIAWIKPGMATNQRKIADYILDNPEKTITLSSQQLAETMGVSQSAIVKFSQKIGFKGFPSLKLAISEELGRKNANSGANPSLLHNQIGSEDSLEVIAQKLAQEKNNSICDTTRQINYLHFEKVIQLIDEAQRVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSSKDLQIVISYSGKRKDMLVAASVAKKQGAKIIAITGEKHSPLGRISDYILETIADEGEWRSASISSRTAQNTITDLIFMALLKKRDECAKTLVLSSQALINSLDN
>NZ_CP053044.1|WP_075673321.1|238325_238931_+|LysE-family-translocator
MTLSLVFSLTIFLFIAAITPGPNNLLLTSSGANVGFKGSLKLMAGIMLGMQCVLLSSAFGVAALLIIYPALHIGLKIIGSAYLLWLAWKTATSSYQRLDIPAKTPQAVSWFQGGLLQFLNPKAWMMGLGAVGSFSLSGDAYFSSVIAISIVMVIVNFVAGIVWILGGTLISLFLQSRRSWFVFNISMGLLTALCVPLIWIE
>NZ_CP053044.1|WP_075673322.1|237245_238226_-|hydrolase
MSQYFNPIRWAKNPHLQTLLPRIVRRTPQLTPHWQRLNLPDNDFVDLAWSEDPATALDKPRLVIFHGLEGGFSSPYAHGMLAAAKERGWLSVVMHFRGCSGEPNRQNRIYHSGETEDARYFLNWLKKEFGEQPTAAVGYSLGGNMLAYYLAESGENAVVDAAVIVSAPLMLEPCSTKIEHGFSRFYQWYLLKELKNNATRKLIRYPESLPISLLTIKSIKKLRQFDDLITSKIHGFKDALDYYRQCSALPLLNKIKKTTLIIHAKDDPFMSADVIPDVKTLPNNIEYQLTEFGGHVGFVGGKLSKPVMWLERRIPDWLATYLEKAK
>NZ_CP053044.1|WP_023583298.1|252088_252307_-|SlyX-family-protein
MDIKEVERLLIQLESKVAFQDATIEELNQVVTQQQIEISRFKEALKIVSERLKNSQTSILARPEDETPPPHY
>NZ_CP053044.1|WP_075674195.1|252641_253394_+|FKBP-type-peptidyl-prolyl-cis-trans-isomerase
MKSLLKTTLLATSLAFAFSAPHAFAEEATAKVPTLNSAFKTQNEQNAYALGASMGRYMEAALQEQKNIGITLDSKQLLAGVQDAFNSKSKLSDAEIELTLAAFEDQVRTAATAKMEKEATENKAAGDKFRTEFAAEKGVVKTKSGLLYLVENPGKGKTPTDADRVTVNYKGMLIDGKQFDSSYDRNEPLTISLKSVIPGWTEGMKYIKEGGKIKLVIPPELGYGQRATSGIPANSTLVFEVELLSVESDK
>NZ_CP053044.1|WP_075674196.1|253492_254374_-|DMT-family-transporter
MYLRQYWAKFGPTTLFVLLWSSGAIFSRWGLDNGSSFAILTWRFIIALAFLSFLCIQRHRFLPPKGSRLKTAWVGLLIIGGYSICYLLALANSITPGMLATIMGVQPIITLWIIERNFTATRLLGLLIALAGLVLVVAQSLFNTALSLTGMIYALVALLCMSFGAISQKKLQLAPMDALPLQYVVSLALCLLFVPFQPFHASFDIGFIIPVLWLAVIISVVAQLLLYRLLTAGNLVNVTSLFYLVPGVTALMDYIFLGNKMSWLSLAGMGAIIVGLLFVFKKPKAIIIEETID
>NZ_CP053044.1|WP_156734278.1|254520_254679_-|hypothetical-protein
MNTLMICQSQQTSSIIGSISVASMPIEILSSPPPPVKVVVVNTTVVVATHVA
>NZ_CP053044.1|WP_023583301.1|255026_255731_+|transcriptional-regulator
MSSPLFNGDSSEFEKLDSRPFTQTDHEILKSYEAAVDGLAMLIGNHCEIVLHSLEDLKCSAVKIANGEHTGRKIGSPITDLALQMLHDITDEDSSFSKAYFTRAKSGALMKSITIAIRNRERRVIGLLCINMNLDVPFSEIIKTFIPEETHEVASDVNFASSVDDLVAQTLEFTIEEVNNDREVANNAKNKQVVLSLYEKGIFDIKDAINQVADRLNISKHTVYLYIRQFKNGE
>NZ_CP053044.1|WP_075674197.1|255740_256136_+|sulfurtransferase-complex-subunit-TusD
MSSLTYCLVVTGPHYGTEQASSAYLFANALLEKGHKISQVFFYREGVVNANKLVSPANDEFDLPKAWVTLAKKHQIPLNVCVAAALRRGIIDEQQAKEQERDCHNMATEFELSGLGSLAQAMLTCSRVVQF
>NZ_CP053044.1|WP_083629137.1|256135_256504_+|sulfurtransferase-complex-subunit-TusC
MKKMNSIAFLFTQAPHGNSAGREGLDALLATSALTEDIGVFFISDGVFQLVENQQPEGVLSRHHAATFKVLPLYDVTNVYISQKDMAHRGLSSQTSFVLDAQVISQEDIAQKLSEYDVVLRF
>NZ_CP053044.1|WP_159242118.1|256535_256829_+|sulfurtransferase-complex-subunit-TusB
MLYTYSVSIYQSDLEAFLSLLAKEDDVLLIQDGVLAVLEDNPLLKYCLQQQISVYALIDDILARGLKDQVSHHIKLINYGDFVDLTVKHPQQIHWGA
>NZ_CP053044.1|WP_004236497.1|256956_257331_+|30S-ribosomal-protein-S12
MATINQLVRKSRSSKVVKSNVPALEACPQKRGVCTRVYTTTPKKPNSALRKVCRVRLTNGFEVSSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDRKQARSKYGVKKPKA
>NZ_CP053044.1|WP_004246897.1|257429_257900_+|30S-ribosomal-protein-S7
MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYNALETLAQRSGKTELEAFEIALDNVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRLANELSDAAENKGAAVKKREDVHRMADANKAFAHYRW

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Crispr_ID: NZ_CP053044_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053044_2

864245-864360

Orphan

Consensus_repeat	Method
ATGGAAACGTCGAAAGCGAGGAATC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053044_2

>merge|NZ_CP053044|2|864245-864360|CRISPRCasFinder
TCTGAAACGTCGAAACTGAGGAATGGAAACGTCGAAAGCGAGGAATCGGAACGTCGAAACTGCGGAATGGAAACCGCAGAAATGCAGAATCATGGAAACGTCGAAAGTGAGGAATC

>NZ_CP053044|2|2|864245-864360|CRISPRCasFinder
TCTGAAACGTCGAAACTGAGGAATG	GAAACGTCGAAAGCGAGGA
ATCGGAACGTCGAAACTGCGGAATG	GAAACCGCAGAAATGCAGAATC
ATGGAAACGTCGAAAGTGAGGAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053044.1\|WP_115370633.1\|870411_870660_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_099660100.1\|860687_861182_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_036904909.1\|866648_867452_+\|KilA-N-domain-containing-protein	unknown	unknown	gnl\|CDD\|367917
NZ_CP053044.1\|WP_159242324.1\|865622_866015_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_109391850.1\|863680_863860_+\|DUF4222-domain-containing-protein	unknown	unknown	gnl\|CDD\|372855
NZ_CP053044.1\|WP_036900998.1\|862934_863393_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_109395844.1\|862652_862865_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|374243
NZ_CP053044.1\|WP_036934641.1\|869125_870292_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|180601
NZ_CP053044.1\|WP_159242320.1\|861949_862612_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|238045
NZ_CP053044.1\|WP_109373189.1\|870988_871378_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374892
NZ_CP053044.1\|WP_159242319.1\|861393_861597_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_159242321.1\|863481_863691_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_115065560.1\|871374_871674_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|368449
NZ_CP053044.1\|WP_159242326.1\|868501_868885_+\|antitermination-protein	unknown	unknown	gnl\|CDD\|368957
NZ_CP053044.1\|WP_006533955.1\|859902_860277_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_159242318.1\|859009_859837_-\|DUF2303-family-protein	unknown	unknown	gnl\|CDD\|378375
NZ_CP053044.1\|WP_023582529.1\|866014_866185_+\|Lar-family-restriction-alleviation-protein	unknown	unknown	gnl\|CDD\|274704
NZ_CP053044.1\|WP_159242323.1\|864987_865626_+\|phage-N-6-adenine-methyltransferase	unknown	unknown	gnl\|CDD\|368643
NZ_CP053044.1\|WP_159242317.1\|858453_858951_-\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236362
NZ_CP053044.1\|WP_159242325.1\|867448_868474_+\|DUF968-domain-containing-protein	unknown	unknown	gnl\|CDD\|310615

Protein	Function_ID	Function_description	E-value
NZ_CP053044.1\|WP_036904909.1\|866648_867452_+\|KilA-N-domain-containing-protein	gnl\|CDD\|367917	pfam04383, KilA-N, KilA-N domain. The amino-terminal module of the D6R/N1R proteins defines a novel, conserved DNA-binding domain (the KilA-N domain) that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses. The KilA-N domain family also includes the previously defined APSES domain. The KilA-N and APSES domains may also share a common fold with the nucleic acid-binding modules of the LAGLIDADG nucleases and the amino-terminal domains of the tRNA endonuclease.	3.72752e-26
NZ_CP053044.1\|WP_109391850.1\|863680_863860_+\|DUF4222-domain-containing-protein	gnl\|CDD\|372855	pfam13973, DUF4222, Domain of unknown function (DUF4222). This short protein is likely to be of phage origin. For example it is found in the Enterobacteria phage YYZ-2008. It is largely found in enteric bacteria. The molecular function of this protein is unknown.	2.31484e-13
NZ_CP053044.1\|WP_159242323.1\|864987_865626_+\|phage-N-6-adenine-methyltransferase	gnl\|CDD\|368643	pfam05869, Dam, DNA N-6-adenine-methyltransferase (Dam). This family consists of several bacterial and phage DNA N-6-adenine-methyltransferase (Dam) like sequences.	1.83617e-61
NZ_CP053044.1\|WP_109395844.1\|862652_862865_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|374243	pfam15943, YdaS_antitoxin, Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT. YdaS_antitoxin is a family of putative bacterial antitoxins, neutralising the toxin YdaT, family pfam06254.	4.04483e-18
NZ_CP053044.1\|WP_036934641.1\|869125_870292_+\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|180601	PRK06520, PRK06520, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase.	5.3485e-151
NZ_CP053044.1\|WP_159242320.1\|861949_862612_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	3.89434e-10
NZ_CP053044.1\|WP_115065560.1\|871374_871674_+\|phage-holin-family-protein	gnl\|CDD\|368449	pfam05449, Phage_holin_3_7, Putative 3TM holin, Phage_holin_3. This is a family of putative proteobacterial phage three-transmembrane-domain holins.	2.12612e-25
NZ_CP053044.1\|WP_109373189.1\|870988_871378_+\|hypothetical-protein	gnl\|CDD\|374892	pfam16931, Phage_holin_8, Putative phage holin.	5.11616e-23
NZ_CP053044.1\|WP_159242326.1\|868501_868885_+\|antitermination-protein	gnl\|CDD\|368957	pfam06530, Phage_antitermQ, Phage antitermination protein Q. This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.	3.67197e-62
NZ_CP053044.1\|WP_159242318.1\|859009_859837_-\|DUF2303-family-protein	gnl\|CDD\|378375	pfam10065, DUF2303, Uncharacterized conserved protein (DUF2303). Members of this family of hypothetical bacterial proteins have no known function.	4.14996e-107
NZ_CP053044.1\|WP_023582529.1\|866014_866185_+\|Lar-family-restriction-alleviation-protein	gnl\|CDD\|274704	TIGR03655, hypothetical_protein_VT2-Sap32, restriction alleviation protein, Lar family. Restriction alleviation proteins provide a countermeasure to host cell restriction enzyme defense against foreign DNA such as phage or plasmids. This family consists of homologs to the phage antirestriction protein Lar, and most members belong to phage genomes or prophage regions of bacterial genomes. [Mobile and extrachromosomal element functions, Prophage functions, DNA metabolism, Restriction/modification].	5.03213e-07
NZ_CP053044.1\|WP_159242325.1\|867448_868474_+\|DUF968-domain-containing-protein	gnl\|CDD\|310615	pfam06147, DUF968, Protein of unknown function (DUF968). Family of uncharacterized prophage proteins found in Gammaproteobacteria. These may be HNH-nucleases, as there are several conserved cysteines and histidines.	1.93742e-75
NZ_CP053044.1\|WP_159242317.1\|858453_858951_-\|single-stranded-DNA-binding-protein	gnl\|CDD\|236362	PRK09010, PRK09010, single-stranded DNA-binding protein; Provisional.	1.74392e-75

>NZ_CP053044.1|WP_109391850.1|863680_863860_+|DUF4222-domain-containing-protein
MNNENPKQLDRYYKNHRGIVVHVVRYDREKQRVIFMLDGCDDPQCEPLQRFKEKYTRVK
>NZ_CP053044.1|WP_159242321.1|863481_863691_+|hypothetical-protein
MSRLAHLIPKKQFRCLPITNGKSFRYVEIIAFDEQPDNYQQKTGLVDRQALKKAWADFYFSSGERGNEQ
>NZ_CP053044.1|WP_036900998.1|862934_863393_+|hypothetical-protein
MSNQSIKQVVKEMCEATAGGREAMAGALGLSLTSFNNKLYEKNGCRSFDLNELLAMQDISQTVLFAEFVARESNRLLVDRISPADLDQTELFTLRSNVDEMQGRLALLMKDSLADGVIDNEEEQKIKMMLDGLISQIRTFMNAFVSLHQKRN
>NZ_CP053044.1|WP_109395844.1|862652_862865_+|helix-turn-helix-domain-containing-protein
MKNKAIEKAISIVGSQQKLAALCGVSQPTVWRWLHGGGMDSKYVVKIVKATSHQVRAQDISPELGELLAQ
>NZ_CP053044.1|WP_159242320.1|861949_862612_-|helix-turn-helix-domain-containing-protein
MSIKTFNSNCNLIFDTQTYKFRDMKTTIAERLKLAMKTRGNMTQAALAEASGVAQPTIWRLVNGNAKGSSKLVDIANALAVNIDWLANGVGEMESPNSTPQFRADRSLEIPVWDENGYTGEAILSPVGKPLKTYKAYILKKNSGCSEAPAGSIAIVDTQLQPGTDDLVIAQIGSSFSVYKFLEGGAQGFLAVDDSRVPLIDISSSVFLGVIVFLVRDFRR
>NZ_CP053044.1|WP_159242319.1|861393_861597_-|hypothetical-protein
MTTEPVIIPPANFTDADVVDWMKEKLSSIKVIGELNARREELVDKLAKLDAEIAEYTNKSAIQIQIK
>NZ_CP053044.1|WP_099660100.1|860687_861182_+|hypothetical-protein
MAEFNRTLQLDLVKCAVDSYPAPIDTKNLPSTIKNADTETLAKNIMYLNEEELLIGGAEYVIGGIHVSLNNVRATKNAINLLSEDGSISASLKVVTVKFHDDTIAALREFITQNVPDPEERKGYLQRLKELPADATKHIVLQLLGKGLNQIPDAVQWLQTVLRS
>NZ_CP053044.1|WP_006533955.1|859902_860277_-|hypothetical-protein
MSQEDRKTNVPDFLSELDAGVFENKVSAVLNDVALGVLNNGGKGKVTIELDIARLSNSMEEKRVEITHKLKFSAPTPRGKRAEEDTTKTPMYVGKGGKLTIMQEDQGQLFSLQGQPDGKLKSVN
>NZ_CP053044.1|WP_159242318.1|859009_859837_-|DUF2303-family-protein
MSQLDGNAISQIQNMAVASLSLDAIEKSLCPAIVLPNDFKVSSLENLQEGRFRFRGEMKTTSISDFVKYSIKNAIDEGVSCFIDANEMSAKTIFNIGTIGEPGHADNTALVKLKQTAPFAALLKIDGVKHRQKELAEWLEDWRDYLMAFDADGNVLDIKQAISAVRRITIESTRSAEHEDHDFSAKRSVLENVEARSKDVMPTAFQFTCTPYDELKERSIKLRYSVLTGGDVPVLVLRIVQLENLEEQIAQEFRNLLCDEFDESDIETFIGKFSA
>NZ_CP053044.1|WP_159242317.1|858453_858951_-|single-stranded-DNA-binding-protein
MANGSVNKVILIGNLGRDPEIRYLPSGGAVANLAVATSEKWRDKQTGENREKTEWHRVILFGKLADIASGYLCKGSQIYIEGQLQTREWDDNGVKRYTTEIVVKVGGSMQMLGGATKSAGSQLAQQNQPPAQPQAQSSQPPMDFEDDIPFAPIGLMYPRHLINVI
>NZ_CP053044.1|WP_159242323.1|864987_865626_+|phage-N-6-adenine-methyltransferase
MIDYALKLQTLKSQSAHKLKEIGDQWRTPENLYWGINSLYGPFTLDLFTDAQNSKCPHFYTVEDNTLTQDWSEKLKEIGGSAFANPPYSRSSYHEKQAVTGVRHIMNHALAMREKGGRYVFLLKVATSETWWCEEADHICFIRGRVGFDVPEWFAPADENQVPTGAMFAGAIVIFDKTWNGKPMDYIQRSELEQIGKTFVEQAKWLVSKGVA
>NZ_CP053044.1|WP_159242324.1|865622_866015_+|hypothetical-protein
MKITEQILALYKVGEEVNRDIVIRDLDTNLAGASRALAHLWTLGALVRISEERPLRYRVTKEAERVYSVITESRKSGESVYIEKLNTQKAKKCALPTIKWVKHATSNFALMGKLPTEPYDSLVRAVRGNH
>NZ_CP053044.1|WP_023582529.1|866014_866185_+|Lar-family-restriction-alleviation-protein
MNNKSCPFCNSKKLEVMQVMINTFTRCQKCGARGPIANNADEALKAWDKRSVNDAN
>NZ_CP053044.1|WP_036904909.1|866648_867452_+|KilA-N-domain-containing-protein
MNGLIVIDGFQVRRDVAGRYCLNDLHRVSGGEKRHQPSNWSSLAQTKELIDEISTAPEITGAPIVTVAGGYNQGTYVCKELVYAYAMWISASFHLKVIRTFDALVTQQHQEKLSDKVQAGVILLESMSKSLNFSNSSKLGAYQKLQAMAGLPELAPVYAIDAPSGSMDGSSRPTVALSTLINKHNLPISAQQAYKRLAELGIVERLSRPSTKTASKTKEFWSVTARGCQFGKNMTSPSNPRETQPHFFESKTDELIRMVMLNKQVSA
>NZ_CP053044.1|WP_159242325.1|867448_868474_+|DUF968-domain-containing-protein
MKLLLTPYIQPELGVVLLKPGAELLEQFKKHHRVIISDVPKSLDVLPSGALTGDEQPILNNKYIIQFLNSKKVIHTIDKVAPMDSWVISNIKYCQIDNDEDNYHHHELVTTFNEAGVIRTCWHHDNHIRHSSAGWVAELAHKNRINWMLDTIRFRLRLDSGHQLTIPDFFSFAVMHNLVDELPEPILRQILNWSDKQEERKVHGGFPEADIIPSNVTALSAMNERLDAIKPVIKIVVDPEPPASFLLKPKMQRWENTNWLQWVKTQPCCVCGQQADDPHHIIGHGMGGMGTKAHDLFTIPLCRIHHDELHRDPKQWEVTHSNQLELLFHFLNRSLGIGAFI
>NZ_CP053044.1|WP_159242326.1|868501_868885_+|antitermination-protein
MRDIQEFLSRWGAWSADNTESVQWYSIAAGFSGLIPSKVKARPQCCEDDAIIISSCMAQLNKKNSDMHDLLLDYYLFGMTFMQLANKHNCSDGHIGKKLQKAEGIIEGMLMMLDVSLEMDRYVEKII
>NZ_CP053044.1|WP_036934641.1|869125_870292_+|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MSTNIPPFKADVVGSYLRPEYLHKARSDYANGTISSHELKKIEDKAIIELVEKQKKAGLHVITDGEFRRSWWHLDFMWGLNGVEKAFLSKGYSFDGIETRPETARLTGKISGNNHPFIEHFSFLLKFAEDNIVPRLTIPAPAQFFKELYRPENLDSTNAIYPSKDELINDIIGAYQEFIKELYLVGCRNLQLDDCTWGMMVDSRYHNSGIAESESVNSCSCHSDHTVISNDINSLAETLVYLNNEAIKNAPSDLVLTTHVCRGNYRSTWAASGGYGPIAEILFGRENVSAYYLEFDTDRAGDFSPLSYVSGNKKVVLGLISSKTGELESKQKVIERIYEASKFVPLDRLCLSTQCGFASTEEGNALTEEQQWDKIALVKEIAQEVWKY
>NZ_CP053044.1|WP_115370633.1|870411_870660_+|hypothetical-protein
MYALKLITEREGRKVEEVHCLGEMYRLEFYPESENKDIVARVEHTRKDAIPSFDINRTDHAYITTVTGDTVRVISRGRKACQ
>NZ_CP053044.1|WP_109373189.1|870988_871378_+|hypothetical-protein
MNEPLTGTTTASLAGVSIVGLFAGMDAGVVIGAFAGAVIFVLSAHDIRLLKRWTYFAVAFLIGIYGADFMSGILSDITGGRDVDKSVGAMFSSAGLVGVLVSISKPGAMTDGINKFINNLIDKFRGGGR
>NZ_CP053044.1|WP_115065560.1|871374_871674_+|phage-holin-family-protein
MTISMFWIYINFFSCLLAVIRLINYRRNGAQYKFGASFIAWVLIILLGSVPLRILTDDYSHADPFEVGINLSLCILILLSRGNIMQIFRGVRHGKDGSR

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Crispr_ID: NZ_CP053044_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053044_3

1150147-1150235

Orphan

I-F

Consensus_repeat	Method
TGTTCACTGCCACATAGGCAGCTTAGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053044_3

>merge|NZ_CP053044|3|1150147-1150235|CRISPRCasFinder
TGTTCACTGCCACATAGGCAGCTTAGAAAAACAGCCCACCATATTCACGTCCAAAGTGAATGTTCACTGCCGCATAGGCAGCTTAGAAA

>NZ_CP053044|3|3|1150147-1150235|CRISPRCasFinder
TGTTCACTGCCACATAGGCAGCTTAGAAA	AACAGCCCACCATATTCACGTCCAAAGTGAA
TGTTCACTGCCGCATAGGCAGCTTAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053044.1\|WP_075670928.1\|1139198_1139603_+\|DUF1311-domain-containing-protein	unknown	unknown	gnl\|CDD\|377758
NZ_CP053044.1\|WP_006533588.1\|1154218_1154653_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	unknown	unknown	gnl\|CDD\|182678
NZ_CP053044.1\|WP_083629114.1\|1157370_1158270_-\|NAD(+)-kinase	unknown	unknown	gnl\|CDD\|235122
NZ_CP053044.1\|WP_099659342.1\|1137604_1137988_-\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|223799
NZ_CP053044.1\|WP_171880593.1\|1151762_1152299_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|334348
NZ_CP053044.1\|WP_075673655.1\|1153579_1154062_-\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP053044.1\|WP_075673656.1\|1154645_1154939_+\|RnfH-family-protein	unknown	unknown	gnl\|CDD\|234982
NZ_CP053044.1\|WP_075673651.1\|1148217_1148796_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|132718
NZ_CP053044.1\|WP_099659346.1\|1148886_1149774_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP053044.1\|WP_159242104.1\|1152320_1152662_-\|colicin-transporter	unknown	unknown	gnl\|CDD\|112349
NZ_CP053044.1\|WP_159242103.1\|1146159_1147710_-\|MCP-four-helix-bundle-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP053044.1\|WP_099659343.1\|1141866_1142586_-\|(Fe-S)-binding-protein	unknown	unknown	gnl\|CDD\|223325
NZ_CP053044.1\|WP_075670932.1\|1140432_1141854_-\|iron-sulfur-cluster-binding-protein	unknown	unknown	gnl\|CDD\|129374
NZ_CP053044.1\|WP_075670930.1\|1139726_1140431_-\|lactate-utilization-protein-C	unknown	unknown	gnl\|CDD\|224473
NZ_CP053044.1\|WP_075673657.1\|1155145_1155508_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|183190
NZ_CP053044.1\|WP_075670926.1\|1138397_1138742_-\|DMT-family-protein	unknown	unknown	gnl\|CDD\|377316
NZ_CP053044.1\|WP_159242105.1\|1155621_1157283_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|236781
NZ_CP053044.1\|WP_075670936.1\|1142705_1144232_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|224535
NZ_CP053044.1\|WP_171880508.1\|1150589_1151744_+\|S-type-pyocin-domain-containing-protein	unknown	unknown	gnl\|CDD\|377742
NZ_CP053044.1\|WP_075673658.1\|1158370_1158982_+\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|184539

Protein	Function_ID	Function_description	E-value
NZ_CP053044.1\|WP_075670928.1\|1139198_1139603_+\|DUF1311-domain-containing-protein	gnl\|CDD\|377758	pfam07007, LprI, Lysozyme inhibitor LprI. This family consists of several bacterial proteins of around 120 residues in length. Members of this family contain four highly conserved cysteine residues. Family members include lipoprotein LprI from Mycobacterium, which binds to and inhibits macrophage lysozyme, which may aid bacterial survival.	4.43412e-12
NZ_CP053044.1\|WP_006533588.1\|1154218_1154653_+\|type-II-toxin-antitoxin-system-RatA-family-toxin	gnl\|CDD\|182678	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin.	2.74661e-84
NZ_CP053044.1\|WP_083629114.1\|1157370_1158270_-\|NAD(+)-kinase	gnl\|CDD\|235122	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	0
NZ_CP053044.1\|WP_099659342.1\|1137604_1137988_-\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	7.83013e-18
NZ_CP053044.1\|WP_171880593.1\|1151762_1152299_+\|hypothetical-protein	gnl\|CDD\|334348	pfam01024, Colicin, Colicin pore forming domain.	2.88542e-60
NZ_CP053044.1\|WP_075673655.1\|1153579_1154062_-\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.19817e-87
NZ_CP053044.1\|WP_075673656.1\|1154645_1154939_+\|RnfH-family-protein	gnl\|CDD\|234982	PRK01777, PRK01777, RnfH family protein.	3.95184e-45
NZ_CP053044.1\|WP_075673651.1\|1148217_1148796_+\|histidine-phosphatase-family-protein	gnl\|CDD\|132718	cd07067, HP_PGM_like, Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly phosphatases; contains a His residue which is phosphorylated during the reaction. Subgroup of the catalytic domain of a functionally diverse set of proteins, most of which are phosphatases. The conserved catalytic core of this domain contains a His residue which is phosphorylated in the reaction. This subgroup contains cofactor-dependent and cofactor-independent phosphoglycerate mutases (dPGM, and BPGM respectively), fructose-2,6-bisphosphatase (F26BP)ase, Sts-1, SixA, and related proteins. Functions include roles in metabolism, signaling, or regulation, for example, F26BPase affects glycolysis and gluconeogenesis through controlling the concentration of F26BP; BPGM controls the concentration of 2,3-BPG (the main allosteric effector of hemoglobin in human blood cells); human Sts-1 is a T-cell regulator; Escherichia coli Six A participates in the ArcB-dependent His-to-Asp phosphorelay signaling system. Deficiency and mutation in many of the human members result in disease, for example erythrocyte BPGM deficiency is a disease associated with a decrease in the concentration of 2,3-BPG.	1.2371e-06
NZ_CP053044.1\|WP_099659346.1\|1148886_1149774_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	3.29733e-75
NZ_CP053044.1\|WP_159242104.1\|1152320_1152662_-\|colicin-transporter	gnl\|CDD\|112349	pfam03526, Microcin, Colicin E1 (microcin) immunity protein.	0.000500826
NZ_CP053044.1\|WP_159242103.1\|1146159_1147710_-\|MCP-four-helix-bundle-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	3.90136e-80
NZ_CP053044.1\|WP_099659343.1\|1141866_1142586_-\|(Fe-S)-binding-protein	gnl\|CDD\|223325	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion].	4.15859e-50
NZ_CP053044.1\|WP_075670932.1\|1140432_1141854_-\|iron-sulfur-cluster-binding-protein	gnl\|CDD\|129374	TIGR00273, Uncharacterized_electron_transport_protein_YkgF, iron-sulfur cluster-binding protein. Members of this family have a perfect 4Fe-4S binding motif C-x(2)-C-x(2)-C-x(3)-CP followed by either a perfect or imperfect (the first Cys replaced by Ser) second copy. Members probably bind two 4fe-4S iron-sulfur clusters. [Energy metabolism, Electron transport].	0
NZ_CP053044.1\|WP_075670930.1\|1139726_1140431_-\|lactate-utilization-protein-C	gnl\|CDD\|224473	COG1556, COG1556, Uncharacterized conserved protein [Function unknown].	3.18862e-64
NZ_CP053044.1\|WP_075673657.1\|1155145_1155508_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|183190	PRK11548, PRK11548, outer membrane protein assembly factor BamE.	6.12185e-71
NZ_CP053044.1\|WP_075670926.1\|1138397_1138742_-\|DMT-family-protein	gnl\|CDD\|377316	pfam04342, DMT_6, Putative member of DMT superfamily (DUF486). This family contains several proteins of uncharacterized function. The family is represented in the Transport classification database as 2.A.7.34, though the exact nature of what is transported is not known.	1.85019e-53
NZ_CP053044.1\|WP_159242105.1\|1155621_1157283_-\|DNA-repair-protein-RecN	gnl\|CDD\|236781	PRK10869, PRK10869, recombination and repair protein; Provisional.	0
NZ_CP053044.1\|WP_075670936.1\|1142705_1144232_-\|L-lactate-permease	gnl\|CDD\|224535	COG1620, LldP, L-lactate permease [Energy production and conversion].	9.46171e-113
NZ_CP053044.1\|WP_171880508.1\|1150589_1151744_+\|S-type-pyocin-domain-containing-protein	gnl\|CDD\|377742	pfam06958, Pyocin_S, S-type Pyocin. This family represents a conserved region approximately 180 residues long within bacterial S-type pyocins. Pyocins are polypeptide toxins produced by, and active against, bacteria. S-type pyocins cause cell death by DNA breakdown due to endonuclease activity.	6.03981e-18
NZ_CP053044.1\|WP_075673658.1\|1158370_1158982_+\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|184539	PRK14150, PRK14150, heat shock protein GrpE; Provisional.	2.32788e-91

>NZ_CP053044.1|WP_099659346.1|1148886_1149774_+|PhzF-family-phenazine-biosynthesis-protein
MQNEVIRSVEHEIKVHLINSFTRNNKGGNPAGVVLNPPLLSDEQKIAIAKEVGFSETAFVYQGEETDFKVDFFTPEGEVDFCGHATLAVFFTLSSLNLLASGHYTQKTKAGILSVAIDTENVVMEQSLPVSRQAPSVDDVATALGINREVILETGLPIEIFSTGLPDILIPVQFGQLDMLKPNFDAIANLSREFNTIGFHVFELSQDKEITAHCRNFAPLYGINEESATGSSSGALGCYLVKHVFPHKTHFLLEQGRAMQCSSLIHVIIDSTENTISRVRVGGKATMIGSKIITL
>NZ_CP053044.1|WP_075673651.1|1148217_1148796_+|histidine-phosphatase-family-protein
MRSVFIFLSIFILGFSHMAYSDQTLVFIRHGEKPDNDSGQLTCKGLNRALALPDVLINQFGKPDALFAAAPKQSKLGNSLRSLQTISPIAIKTSLPIHLQYHAKEIKELREDLLSQQYENSVIFIAWEHDNLVKVARDIMKQEGGDPKLIPKWKSSDFDSIYILKIIREGDKKSVIFEQKQQGLDSVSEDCP
>NZ_CP053044.1|WP_159242103.1|1146159_1147710_-|MCP-four-helix-bundle-domain-containing-protein
MFFKNFKIRTKLTIAFTTFVMLIMLGSGFALMGLNSANQDIHDVVDDIYPATVKANLLINNFNEFIIFQQLTMLDEQGSLAAEQESKKAEITAKVAQLLKELDETAHDAESKKILAEVYDIRQQYITSQNFVVKAFNENNRHAAVNELITKTSAIQLKYRDKILEFIELQNKKMNEAGDAVEHDFIEKRIFLVLLTLASIIVGSILGWFITKGITLPLEKAINFAKAIANGDLTQEVKTDYHDEAGILLRTLAEMKMHLLDVVQNVQNGAENISSAAEQITAGSQNLAARTEEQATSVEETASSMEQMTSTVKNTADHTHDAINVAEKTEIAVHHNGEMMLQLTEKMRAINSSSSQMTDIINLIDAIAFQTNILALNAAVEAARAGEHGKGFAVVAGEVRLLAQKSADSANDIRTLIDNSSTQTQEGMELVEQAGSQIQKMITDVEDISTLLREIGQASNEQSDGISQINNAISQLDSTTQQNAGLVEESVAAANSLNEQALNLNKLVNYFQIHRA
>NZ_CP053044.1|WP_075670936.1|1142705_1144232_-|L-lactate-permease
MSDYLSFLLGIVPLAVLIFMILKMKSAVHHAVLVSLVITVALAIFHWNNTIQFASVSVLYGAVKGLWPIIIVILAAIYSYNLMLKTGGMDVLKDVLAGISDDKRVQVLLISWCFGGFLEAVAGYGTAVAIPIGILIALGFDPFKAAVASLVANTVPTAFGAVGIPVSILAQNTGLDVLVLSKTIIIQLGLFNILLPFVIVAIAGGGIKAIKGVGFITLMCGISTLIPQYIVAANLGAELPAFAGSLVSLIVVIFLAKRMKNSGDKQKNVKKHTGKELLVASSIYLFTFIFILACSPLFPAIQSMAGAISTKIPFVLSETQTEYQTIAWLSTPGVLIILASFVGGTIQGASISTLISVLVKTTIQLKNSIIAITAIVAMATVMDFSGMIGSIAETLVDFTGAGFIFIAPVIGALGTFVTGSDTNSNVLFGKLQTSAAAKLNIDPFILAAANTSGATGGKMISPQSIAIAVSATKMDGQSSAIMRETLKYCIAYIIILGAKIGIIYHLMN
>NZ_CP053044.1|WP_099659343.1|1141866_1142586_-|(Fe-S)-binding-protein
MKVNFYATCLGDVLKADSARDTVLLLEKLGCEVLFQERQGCCGQPALNSGYVNNAKPAMKSLIETLEVNDYPIISPAGSCTYAIKGYPTYLADEPQWALRAQGVADRLIDLTSFIVNTLGVVDVGARLPGKAVYHPSCSLTRKLGVVSEPLTLLKHVEGLEMLPFANSETCCGFGGTFSVKMSEISGEMVTEKVKHIMDVSPDYVIGADTSCLINIQGRLSREKRPVKVLHIAQVLMSQ
>NZ_CP053044.1|WP_075670932.1|1140432_1141854_-|iron-sulfur-cluster-binding-protein
MSIKTSDIDFRPRLEHEMKDTIMRNAVVMAQERIGANRQIMVKELGNWEEWRDRAEQIRNHVLENLDAYLYQLSEKVTENGGHVYFAKTAEDASRYICEVAKKKNAKKIVKSKSMVTEEIGMNKALQNEGIEIIETDLGEYILQLDNDPPSHIVVPAIHKDRYQIRKVLNEKLNYEGSETPEDMTLFIRQRIRQDFLSADIGVTGCNFAVAETGTVCLVTNEGNARMTTTLPKTHIAVMGMERVAPTFEEVDPLITMLCRSAVGSRLTSYNTWVTGPREAGNVDGPEEFHLVIVDNGRSEILGSQFKDILRCIRCGACLNTCPAYRNIGGHAYGSIYPGPIGAVISPLLGGYKDFHDLPYACSLCNACNVVCPVKIPLAQLILKHRRVMAETGLTPKAERRVTGMFNYLNSHPALWKVGMNVGAKMAGLMIKNGSTPIKISVLNDWMESRDLPKPDGYSFRSWFKRHKAEGKK
>NZ_CP053044.1|WP_075670930.1|1139726_1140431_-|lactate-utilization-protein-C
MLNEQNRNEFLQTIAEKLGRPIAHKPQPQPTPINDLAKTRLTNLTQDELCKEFTDFAQTQMVKCVVTKPDEVINSLIELCESYDCKGSVVISGDERLDALGVTKAVSEKYETYIWDPALGRENIVYAERSQIGIVYAEAGLTESGGIVLFSSPEKGRAVSLLPETSIVILRKSDILPRVAQIAERLHKMAQEGVRMPSCINLIGGASSTADIELIKVWGVHGPVHAAYLIIEDC
>NZ_CP053044.1|WP_075670928.1|1139198_1139603_+|DUF1311-domain-containing-protein
MKISLFLISCSLLTVSFFSSAQGKYDPLAKCYEVTANEPRTAVQACLLDELKLTEQQMNVIYDKSKSDLEDTDSVAAKSAIDALASSQQHFIQFRSAECQRQSALLMGGSGAGDVLLACEIKLNQWRAKILLNN
>NZ_CP053044.1|WP_075670926.1|1138397_1138742_-|DMT-family-protein
MFYKFTPIILLIISNVFMTFAWYGHLKYGNKPLIVVIILSWLIAFVEYCFAVPANRIGHNYYSAAELKTIQEVITLTIFAIFSVTYLGENFTLNHFIGFLLIGAGALFIFKGPF
>NZ_CP053044.1|WP_099659342.1|1137604_1137988_-|YkgJ-family-cysteine-cluster-protein
MSKHSNDFIYMQDNPCMHCGACCAYFRVSFYWAEMVSGGGVVPDELTEPLTPFLSCMKGTNSKKPRCEKLIGEVGECVSCSIYEQRPSPCREFQQSWVNGIPNEACDRARAAYGLPPLTHTILPHTA
>NZ_CP053044.1|WP_171880508.1|1150589_1151744_+|S-type-pyocin-domain-containing-protein
MFITRANVDQYPGLPPDIIRDIKQNGWTYDTEGDDGYGGWITDGGKVSDNGAEEELLAVLSEIPINKSNHNFNWSKIPTLADSDKDEYPSPNVGNGGSSPFNPNTKITVNKPQKPVIISSNNNKLTNSSNNRELATNKGVMHFNGVVIEQLETFKKKYFLTKEAVNLVQDKLVESVISLYSKENCIDDNNVNSVKFMEFSEFDNNSFDELDLMSTIPAENLINNPDLMSGKLNEIAKNNGTVNVNARMAVIKENNKASATLVRTDGVLVTKEVPVYPANYIGNGYHMDIKNFGIEYVLIPAGSYSGLGLQGNIIQKYSNENKKFSYPEKVELSNKVESKRIDAPYPHQINDAIIVFPRNSNLPPLYAYSGFPAIKLKDKDPRPQ
>NZ_CP053044.1|WP_171880593.1|1151762_1152299_+|hypothetical-protein
MKNGVKFTSDFYKEVFNTYGNEAEKLARDLASEAKGNTIRNVDDALKTYNQHKDNINKKVSTKDREAIAKALESVKVNDIANNLKKFSKGMGFVSKAMDVNDLRIELIKAVETDNWRPFFVKAETIATSMAVSAVVGFAFSALLGGPIGILGYALIMAGVGALINDKLIERTNKLIGI
>NZ_CP053044.1|WP_159242104.1|1152320_1152662_-|colicin-transporter
MTKKYYINNMFWGWFMGLLLIYSCLYHDISEYKWLLLFVLSIIGIGLYPLAKFAVESFFLIFTTREFWNKGLFMDTPAKLGGIALYQGIIFFLSLPIILIFTLVIFIRRWLTK
>NZ_CP053044.1|WP_075673655.1|1153579_1154062_-|SsrA-binding-protein-SmpB
MTKKKSHKPGSATIALNKRARHEYFIEDEIEAGLALQGWEVKSLRAGKANISDSYVVMRDGEAYLFGATITPLNVASTHVVCDPTRTRKLLLKQRELDNLYGQINRDGYTVVALSLYWKNAWCKIKIGVAKGKKDHDKRDTIKDREWKLDKARIMKNANR
>NZ_CP053044.1|WP_006533588.1|1154218_1154653_+|type-II-toxin-antitoxin-system-RatA-family-toxin
MPQISRSALVPFSTEQMFKLVNDVLTYPDFLPGCVGSKLIKSTPEEMIASINVSKAGISKTFTTHNFLKTNERVDMRLVDGPFRKLTGGWVFTALDDNACKIEFQLDFEFTNKLIELAFGRIFKDLTNNMVQAFTHRAKEIYRD
>NZ_CP053044.1|WP_075673656.1|1154645_1154939_+|RnfH-family-protein
MTKIWVEVTYALPDKQYLIPVELTLGDTVEQAIIASNILTICSDIDLTKNKVGIYSRPTKLSDNVRDGDRIEIYRPLIADPKEMRRKRAEKARQKAD
>NZ_CP053044.1|WP_075673657.1|1155145_1155508_-|outer-membrane-protein-assembly-factor-BamE
MRFKLLKVAALSLVVMTSGCSMFERLVYHPDINQGNYLTPAEVAKVQQGMTQQQVQFALGTPMLKDPFGSQTWYYVFREEPGHQKVRQETLTLTFDSNGILTKIDKQGNMPSFSAPETKS
>NZ_CP053044.1|WP_159242105.1|1155621_1157283_-|DNA-repair-protein-RecN
MLTQLTISHFAIVRELEIDFSGGMTTITGETGAGKSIAIDALGLCLGNRGDANMVRPGATRADLCARFSLSDTPSAQRWLEEHHLDDHNECLLRRTISTDGRSRGFINGTSVPLSQLRELGSLLIQIHGQHAHQQLLEPRYQKQLLDIYAHEPALLKSMKSAYQTWHQSCQTLATFQQLSLEREARQQLVDYHLKELNEFQPVQGEYPELDQEYKRLSNCGQFLTLSQNSLQILSDNEEQNILSMLNVAKHEITELTSMESQFNSLLEMLEEATIQISEVSDELRHYSDRLEMDPNRLFEVEKRMSKYINLSRKHRVAPEELYDLHQQLIEEKNALLRQNDDCEALIEQVKADHLMALDVAKQLHQVRQQYANELSQLITNSMHQLSMPHGYFTVDTHFDDNSLQIDGATKVEFNVTTNPGQPHQALSKVASGGELSRIALAIQVITAKKMDTPALIFDEVDVGISGPTATIVGKLLRELGESTQVMCVTHLPQVASCGHQHYFVNKETNGEETETTMKLLSKKERLQELARLLAGSEVTKNTLANAKDLLAA
>NZ_CP053044.1|WP_083629114.1|1157370_1158270_-|NAD(+)-kinase
MPDNTVTEEKHFKCIGIVGHPRHPEAISTHEMLYHWLLAQGYDVIIDTQVAQELKLENAQTGDLTQVGKVADLVIVVGGDGNMLGAARVLSRYNIKVIGVNRGNLGFLTDLDPDNALQQLTNVLAGHYREEKRFLLEARVCAEGQRTRIGTAINEVVLHPGKVAHMIEFEVYIDDRFAFSQRSDGLIIATPTGSTAYSLSAGGPILTPNLDAIALVPMFPHTLSARPLVISSDSQIRLKFSQTNIDYEVSCDSQLVLPIKEGDEVIIKRSRQKLNLVHPTDYNYFNTLSSKLGWSKKMF
>NZ_CP053044.1|WP_075673658.1|1158370_1158982_+|nucleotide-exchange-factor-GrpE
MSSKEQNVHEEQVSKEKEGMGSVMDESQEQVMTEETTADFNAQAELVEALARIDSLEKQLEQSQKTEREAMARALAEVENVRRRTQQDIEKAHKFALEKFSNELLPVLDNLERALSAADHENETMKPMIEGLELTLKSFLDAVRKFGIEVVEEKNVVFNPEVHQAMTLIDSPEHESNHVVDVMQKGYTLNGRLLRPAMVIVSK

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Crispr_ID: NZ_CP053044_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053044_4

1250127-1250279

Orphan

Consensus_repeat	Method
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053044_4

>merge|NZ_CP053044|4|1250127-1250279|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCACATATTGGATTGTTCTAGAAGTATATTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

>NZ_CP053044|4|4|1250127-1250279|CRISPRCasFinder
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAACCCCA	CATATTGGATTGTTCTAGAAGTATATTGGTGGAGCTAAGCGGGATCGAACCGC
TGACCTCTTGCATGCCATGCAAGCGCTCTCCCAACTGAGCTATAGCCCCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053044.1\|WP_075670694.1\|1249279_1250032_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP053044.1\|WP_075670528.1\|1247086_1248271_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP053044.1\|WP_075670518.1\|1240919_1241873_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273465
NZ_CP053044.1\|WP_023581656.1\|1248437_1248653_+\|DUF3820-family-protein	unknown	unknown	gnl\|CDD\|378970
NZ_CP053044.1\|WP_159241926.1\|1256011_1257058_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238562
NZ_CP053044.1\|WP_075670534.1\|1255112_1255415_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP053044.1\|WP_023581663.1\|1260258_1260837_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|274451
NZ_CP053044.1\|WP_075670526.1\|1244830_1246858_+\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|236137
NZ_CP053044.1\|WP_006533407.1\|1240330_1240588_-\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP053044.1\|WP_109419083.1\|1266354_1266558_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371128
NZ_CP053044.1\|WP_075670532.1\|1250435_1251854_-\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP053044.1\|WP_159241998.1\|1257070_1259200_-\|TonB-dependent-siderophore-receptor	unknown	unknown	gnl\|CDD\|273805
NZ_CP053044.1\|WP_109419089.1\|1248655_1249096_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP053044.1\|WP_075670546.1\|1264912_1265689_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380379
NZ_CP053044.1\|WP_159241929.1\|1264004_1264808_-\|TSUP-family-transporter	unknown	unknown	gnl\|CDD\|376667
NZ_CP053044.1\|WP_159241928.1\|1260851_1263131_-\|thiosulfate-reductase-PhsA	unknown	unknown	gnl\|CDD\|237973
NZ_CP053044.1\|WP_075670524.1\|1243746_1244775_+\|cell-division-protein-ZipA	unknown	unknown	gnl\|CDD\|235124
NZ_CP053044.1\|WP_159242113.1\|1242752_1243523_-\|sulfate-transporter-CysZ	unknown	unknown	gnl\|CDD\|179898
NZ_CP053044.1\|WP_171455319.1\|1242057_1242639_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053044.1\|WP_159241927.1\|1259482_1260262_-\|thiosulfate-reductase-cytochrome-B-subunit	unknown	unknown	gnl\|CDD\|184968

Protein	Function_ID	Function_description	E-value
NZ_CP053044.1\|WP_075670694.1\|1249279_1250032_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	8.02224e-79
NZ_CP053044.1\|WP_075670528.1\|1247086_1248271_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	1.45849e-148
NZ_CP053044.1\|WP_075670518.1\|1240919_1241873_-\|cysteine-synthase-A	gnl\|CDD\|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	1.24499e-173
NZ_CP053044.1\|WP_023581656.1\|1248437_1248653_+\|DUF3820-family-protein	gnl\|CDD\|378970	pfam12843, QSregVF_b, Putative quorum-sensing-regulated virulence factor. QSregVF_b is a family of short Pseudomonas proteins that are potential virulence factors. The structure of UniProtKB:Q9HY15 a secreted protein has been solved and deposited as Structure 3npd, from pfam13652. It is predicted that these two adjacent proteins form a single transcriptional unit based on the prediction that together they interact with their adjacent protein PotD, which is the putrescine-binding periplasmic protein in the polyamine uptake system comprising PotABCD. These two adjacent proteins are predicted to be quroum-sensing-regulated virulence factors.	1.01036e-33
NZ_CP053044.1\|WP_159241926.1\|1256011_1257058_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238562	cd01142, TroA_e, Periplasmic binding protein TroA_e. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	5.68709e-76
NZ_CP053044.1\|WP_075670534.1\|1255112_1255415_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.95221e-11
NZ_CP053044.1\|WP_023581663.1\|1260258_1260837_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|274451	TIGR03149, cyt_nit_nrfC, cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase. [Energy metabolism, Electron transport].	3.28934e-76
NZ_CP053044.1\|WP_006533407.1\|1240330_1240588_-\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	1.73301e-41
NZ_CP053044.1\|WP_109419083.1\|1266354_1266558_+\|hypothetical-protein	gnl\|CDD\|371128	pfam10547, P22_AR_N, P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	3.25464e-07
NZ_CP053044.1\|WP_159242113.1\|1242752_1243523_-\|sulfate-transporter-CysZ	gnl\|CDD\|179898	PRK04949, PRK04949, putative sulfate transport protein CysZ; Validated.	3.04338e-144
NZ_CP053044.1\|WP_159241998.1\|1257070_1259200_-\|TonB-dependent-siderophore-receptor	gnl\|CDD\|273805	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor. This subfamily model encompasses a wide variety of TonB-dependent outer membrane siderophore receptors. It has no overlap with TonB receptors known to transport other substances, but is likely incomplete due to lack of characterizations. It is likely that genuine siderophore receptors will be identified which score below the noise cutoff to this model at which point the model should be updated. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.86292e-78
NZ_CP053044.1\|WP_109419089.1\|1248655_1249096_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.61862e-15
NZ_CP053044.1\|WP_075670546.1\|1264912_1265689_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380379	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain. This family contains mostly bacterial proteins containing an AraC/XylS family helix-turn-helix (HTH) DNA-binding domain C-terminal to a cupin domain, and may be possible transcriptional regulators. Included in this family is Escherichia coli HTH-type transcriptional regulator NimR (also called YeaM) that negatively regulates expression of the nimT operon and its own expression. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	2.21656e-29
NZ_CP053044.1\|WP_159241929.1\|1264004_1264808_-\|TSUP-family-transporter	gnl\|CDD\|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	1.11416e-20
NZ_CP053044.1\|WP_159241928.1\|1260851_1263131_-\|thiosulfate-reductase-PhsA	gnl\|CDD\|237973	PRK15488, PRK15488, thiosulfate reductase PhsA; Provisional.	0
NZ_CP053044.1\|WP_075670524.1\|1243746_1244775_+\|cell-division-protein-ZipA	gnl\|CDD\|235124	PRK03427, PRK03427, cell division protein ZipA; Provisional.	2.71136e-138
NZ_CP053044.1\|WP_075670526.1\|1244830_1246858_+\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|236137	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated.	0
NZ_CP053044.1\|WP_075670532.1\|1250435_1251854_-\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP053044.1\|WP_159241927.1\|1259482_1260262_-\|thiosulfate-reductase-cytochrome-B-subunit	gnl\|CDD\|184968	PRK15006, PRK15006, thiosulfate reductase cytochrome B subunit; Provisional.	5.89424e-142

>NZ_CP053044.1|WP_075670694.1|1249279_1250032_+|SDR-family-oxidoreductase
MDYFKDKVILVTGASTGVGEGIAQLLFQRGATVFITGRHLEEITKTARSIDITGKKVIALQADMTSFSQVEKMIETIIAQVGALHGLVNNAGITGPHNTSIVDYEIEDWKAVIDTDINGVFYGMKYGIPAILKSGGGSIVNLSSSNGIVGIAGISAYTAAKHAVLGITRSAALEFADKGIRINAIGPGYVDTPKMQMLPNEVREWMANTHPMKRMATREEVAKTVAFLLSDESSFSTGAFYAIDGGYTAQ
>NZ_CP053044.1|WP_109419089.1|1248655_1249096_-|MarR-family-transcriptional-regulator
MEKCKLENALSLLQCTLVAQRTRYTPEQVTWGQYDILELLRLRGDLTPSQLSDSLAISRQNLSKFMRGLKSLGFIAQYRSEKDKRELITHLTDEGHAFLARAALGRKQNAEKISECLTLGEQTLFIELSQKIINALTPGKSAMDND
>NZ_CP053044.1|WP_023581656.1|1248437_1248653_+|DUF3820-family-protein
MLEKQHLIDIANTQMPFGKYKGRMLVDLPEEYLLWFAKKGEFPEGKLGQLMEMTLAIKIEGLEGLLKPLKR
>NZ_CP053044.1|WP_075670528.1|1247086_1248271_+|NupC/NupG-family-nucleoside-CNT-transporter
MSSIIHFVLALAVIGALAFVASNNRKGIRLRYIVQLLVIEIALAWFFLNSDVGEGFVRGFAGLFDHLLGYAAQGTEFVFGGMMKGGLAFFFLNVLCPIIFISALIGILQHIKVLPFVIRIIGTVLSKVNGMGKLESFNAVSSLVLGQSENFIAYKDVLSKMSQRRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSVINPYSVENEEEIQMGNLHEGQSFFEMLGEYILAGFKVALIVAAMLIGFIALIAAVNAIFSMIFGISFQDCLGYVFYPLAWVIGVPEQDALRVGSVMATKLVSNEFVAMGSLQDIAAEISPRSVGILSVFLVSFANFSSIGIVAGAIKGLNEVQGNVVSRFGLKLLFGSTLVSFLSAAIAGLFV
>NZ_CP053044.1|WP_075670526.1|1244830_1246858_+|NAD-dependent-DNA-ligase-LigA
MNKNTQQKIDKLRVTLRHHEYLYHVMDAPEIPDAEYDRLMNELKALEAEHPELITSDSPTQRVGALPLTAFEQVRHEIPMLSLDNAFDETSYLAFDKRLRDRLKNSEEITFCCELKLDGLAVSLLYENGVLVQAATRGDGTTGENITENVRTIKAIPLRLYGEDIPARIEIRGEVFMNEKGFEYLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPTSHYERLQQFKKWGLPVSDAVKLCSGSKAVLDFYHHVEEIRPNLGFDIDGVVIKVDDIALQEELGFVSRAPRWAIAYKFQAQEQMTIIKDVEFQVGRTGAITPVARLEPVQVAGVVVSNATLHNADEIERLGIRIGDTVVIRRAGDVIPQVVSVIEEKRPDDAQEIIFPTHCPICDSDVERIEGEAVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLDEKILSGLERMGEKSAKKLITALDKAKSTTFARFIYALGIREVGEATASGLTTHFSTLDALRNADVEALKSVPDVGDVVAKHVVNFFQEEHNRTVIEQLINDAGITWQAPVIVTHEAGDNPFAGKTVVLTGSLSQLTRDEAKDRLAALGAKVSGSVSKKTDMVIAGEAAGSKLVKANELGIAIIDEDEMIRLLDQSK
>NZ_CP053044.1|WP_075670524.1|1243746_1244775_+|cell-division-protein-ZipA
MMQQNLRLILIVVGAILIIALLLHGLWIGRKERSKLFRNRPVKRQKQNYQSDENDDEPQYAGASHQTSTLSSTEKRESEPPIKSESLHEPEISVADRDPLMSETQTKGSSHDTSLQQEPSLGVFDVIEKEPVPIVRDEPKQEPVVNVASEIKSHVNTVSPSVSFEPSISETTAHVTPVETEASHHALAEEPIAESAPQATEAEKELVIVLNVSAHHGQMLDGEVLMQSIIQAGFQFGEMNIFHRHLNPTANGPVLFSLANMVKPGTFNIDTMAELTTPGVSMFMMVPSYGDANQNFKLMLLTAQRIASDVGGVVLDDERKLLTPQKIELYKSRIRRTLDLNQ
>NZ_CP053044.1|WP_159242113.1|1242752_1243523_-|sulfate-transporter-CysZ
MTNLTETNKNLNGFHYFALGWRLITRKGLKRFVILPLLANIIILGSAFWWLYGQIGGMVNWMMEKVPDWLQWLSYLIWPLSVIFILLVFTYFFSTLANIIASPFNGLLAEKLEGQITGIAPPDTGVAGILKDVPRILKRELTKIAYYLPRAIVLLLLYFIPAIGQTVAPILWFAFGAWMMAIQYNDFPFDNHKISFSAMKSSLKQDKWNNLQFGMVINIFTMIPILNLVIMPVAICGATAMWCDRYRKQHVQDGQW
>NZ_CP053044.1|WP_171455319.1|1242057_1242639_+|hypothetical-protein
MADNLFLTTFIANTGVIMETIEELISALELAVPELDAQVLRENLPESDAQEDVLNWLYESLSAQGLMDYVEWTEYFGDIPDLKSLEHISFPESPSALILSQVENIDWDEVSVDPYMLPYELPYLEYINHFLTEKGLRLVDLTPFENAYIFCIRDDEEIMEKLDGALNIFEMGINEREPMDKEETKDYIRSLIE
>NZ_CP053044.1|WP_075670518.1|1240919_1241873_-|cysteine-synthase-A
MSKIFEDNSQTIGHTPLIRLKHFGNGNILAKVESRNPSFSVKCRIGANMIWDAEKKGILKEGVELVEPTSGNTGIALAYVAAARGYKLTLTMPDTMSVERRKLLKALGANLVLTEGAKGMKGAIDKANEIRESDPKRYLLLQQFSNPANPEIHEKTTGPEIWNDTDGEVAAVIAGVGTGGTITGIGRYLKKTQGKAVTMVAVEPTGSPVITQALAGEEIKPGPHKIQGIGAGFIPENLDLSLLDRVIQITNEEAFDTARELMTKEGILAGISSGAAIAAAVKLAKEPEFANKEIVVILPSSGERYLSTPLFADISDS
>NZ_CP053044.1|WP_006533407.1|1240330_1240588_-|phosphocarrier-protein-Hpr
MYQQEVTITAPNGLHTRPAAQFVKEAKTFSSDITLISSGKSASAKSLFKLQTLGLTQGTVVTISAEGEDEKQAVEALVKLMAELE
>NZ_CP053044.1|WP_075670532.1|1250435_1251854_-|glutamate--tRNA-ligase
MSKIKTRFAPSPTGYLHVGGARTALYSWLYSRHNKGEFVLRIEDTDLERSTQPAIDAIMDGMNWLNLNWDEGPYYQTKRFDRYNQVIDQMLSAGTAYRCYCTKERLEQLREDQMAKGEKPRYDGCCRGGNHNHSADEPHVVRFLNPQEGSVIFDDKIRGPIEFSNQELDDLIIRRTDGSPTYNFCVVIDDWDMEITHVIRGEDHINNTPRQINILKALGAPVPEYAHVSMILGDDGKKLSKRYNAVSVMQYRDEGYLPEALLNYLVRLGWSHGDQEIFTIDEMIEHFTLEAISKSASAFNTDKLLWLNHHYINTLPAEKVAVHLDWHIKQQNIDTSNGPSLVELIKLLGERCKTLKEMAESCHYFYVDFDTFEETAAKKHLRPVARQPLEVVRDKLSAITEWTAENVHQAIQDTADELEVGMGKVGMPLRVAVTGAGQSPGLDVTVHAIGKTRSVARINKALDFITERENQA
>NZ_CP053044.1|WP_075670534.1|1255112_1255415_+|helix-turn-helix-transcriptional-regulator
MSSKYPVAYAVGQKIKSLRKSQGYTVFQLAKEIDISEQQLFRYERGVNRIDIDCLVRVLEVLGVNIGSFFEEVTGGMAQESEHNEQHIPAHFDSKALSIF
>NZ_CP053044.1|WP_159241926.1|1256011_1257058_-|ABC-transporter-substrate-binding-protein
MYKGFFKILCIALLEASALSISFNVQAQRVVQYYQNQTITIPDSPERVATSWNAQNAILAMLGAGDKIVSTTDLVKTIPFFTEIVPAIKTASISSKGNNETLNIETLIVSQPQIFFATGKLSDAQMTALKNAGISVALLKSGSMDALLERTLITGEILGSSSHQLANDYLAYFQRNEALVKSAVSEISTNKPMKVYHAFGSPLRTSGAPSLNHDWITLAGGINVAEHWFDNVSSRAGDVSLEQVIHANPDVIVTMYARDTEIIKNAPEWQSISAVREGRVYTNPKGLFWWCRETTEEALQFLWLATVLYPEQTKHINISKETQQFYKTFFNITLTDQQLKHILKPLKD
>NZ_CP053044.1|WP_159241998.1|1257070_1259200_-|TonB-dependent-siderophore-receptor
MISTIACAIAQTLAVSASVAAENAEKIVVTAQPVNNSEAGAGFVTREVDMGPLGEKKWLDTPYTTNTFTQSMIENQQVTNVADILKYNASSQMQARGGMDVGRPQNRGMQGNVVANSRLDGVNIISTTAFPIEMLDRVDIINGLTGSLYGPASPSGQFNFTQKRPTLKRLTSLNATYVSDNQFKGHLDLGGFIDDNNTFGYRINLMHDEGKGYVAGSKTRRQLISTVFDWNISSDTVLEVNFSDYWFKKIGYPGAFSYGPKVTALPDAPDPTKAGYGQAFAGVDLHTRTVSSRLKHDFNEDWQISAAIGYQTADRGFRSVSNQLSHDGKQFTPTLSVPTTYGRFTILSHSVNVNGHVMTGALSHDLILATSGYRWDIYGANGNDQKFTLPTQDINNPHRYDDPSHEGFYTGAARTKNSRSQVQSFTLGDTVTFNPQWSVMGSLSQNWIKETSYRAGGGNHTENGLSPAVALMFKPIPEVMTYVSYADSLEEGDSAPNTANNKNEVLKPYRSEQWEMGVKSQIGDLNLNAAIFQLERPFAYVGNDNIFKEQGKQRNRGLELIANGKVTDELFVFSSMTWLDPTLTNTGNAQTQDKDVVGVPKYQANLLAEYHYPTLPNVIYSANVHYTGKRAANTTNTMWAKAYITLDLGARYQTQYWDKKTTFRLNLDNVTNEHYWASIFSGNQNGAIGGANAFLGTPRQVSASVSIEL
>NZ_CP053044.1|WP_159241927.1|1259482_1260262_-|thiosulfate-reductase-cytochrome-B-subunit
MTSIWGAELHYTPDYWPVWLMAAGLLIVAMIAVLVIHGLLRYALAPKHSDHYEEERVYLYSKAIRFWHWGNALLFILLLLSGFLGHFSIGNVTSMVLLHKICGFVLIAFWIGFILINLTTSNGVHYKVRFSGLIGRCIKQARFYLYGIMKGEPHPFAATETDKFNPLQQLAYLGVMFGLVPLLLVTGLLCLYPEVLGEGYWMLKAHLVLGIVALMFICAHFYLCTLGDTFTQTFRSMIDGHHRHQKHDDHSSVTEKTEH
>NZ_CP053044.1|WP_023581663.1|1260258_1260837_-|4Fe-4S-dicluster-domain-containing-protein
MNNNDKQFVMLHDEKRCIGCQACTVACKVINDIPEGFSRLQVQIQGPHDDEAGNPHYQFFRVSCQHCEDAPCVSVCPTGASFIDENGIVQVKKELCIGCDYCVGACPYHVRYINPMTHIADKCNFCSDTRLAEGELPACVSVCPTDALAFGRIDSPEIQAWIKQKSVYQYQLDNVGKPSLFRRKEIHQGDKA
>NZ_CP053044.1|WP_159241928.1|1260851_1263131_-|thiosulfate-reductase-PhsA
MSISRRSFIKGMGIGCVGCTVSSLPPGALAFNPVDSLKGQSTLTPSLCEMCSYRCPIEAQVVNNKTVFIQGNRNAEHQSSRVCARGGSGVSLVNDPNRIVKPMKHKGPRGAGEWEVISWEQAYKEIAEKMNAIKQNYGAESISFSSKSGSLSSHLFHLAAAFGSPNTFTHASTCPAGKAIAASVMMGGDLKMDLANSKYILSFGHNLYEGIEVAETHELMTAQERGAKLVSFDPRLSVVSSKADEWFAIRPGGDLPVLMAMCHILIKEDLYDKAFIEKFTIGFPQLKEVLQDTTPEWAQAHSDVPAKDIVRIAREIAAKAPHALIMPGHRATFNKEEINMRRMIFTFNALLGNIEREGGMYQKKAATKYNKLAGIDVAPELAKPSVKGMPEITAKRIDATAPQFKYINKGGGIVQSIIDSTLEGVPYQTRAWIMSRHNPFQTVSCRPDLEKAAQKLDLIVSCDVYLSESAAYADYLLPECTYLERDEEVADVSGLNPAYALRQQVVEPIGDTKPSWLIWMELGKALGLEACFPWENMGVRQLYQVNGSEELYKEMHKKGYISYGIPLLLREPSYVKAFVEQYPDAIKHVDSNNTMEKALSFKSPSGLIEIYSEELESRLENYGIPRFHNFPLKEKDELYFIQGKVAVHTNGATQYVPLLAELMWENPVWLHPETAKNHGIKHGDEIILENNIGKEKAHALITEGIRPDTVFVYMGSGAKAGARTAATTTGVHCGNLLPHEISPVSGTDVHTSGVRISRA
>NZ_CP053044.1|WP_159241929.1|1264004_1264808_-|TSUP-family-transporter
MTLWLISFGLISGITTWLFGFGGGFVTVPLLYTLILTLWGIDSLPAEHAMQIAVATSALIMLFSATVTTIKHHKAKRLDWNIMSILFMGIALGGILGALLALTVEGTWIKWIFIGYLFITILDCYFRPGFMAPTHNSKTVTKAKESINGTVIGIIAAFLGVGGSVMTVPLLRRRGTPMAQSAAMANALTLPLALTATFTYVALSFTSPLNSESGFIGYIWLKAALILICSTWVGLKISERFLSRIPDKWHARVYPLLLSLVLIVMLF
>NZ_CP053044.1|WP_075670546.1|1264912_1265689_+|helix-turn-helix-transcriptional-regulator
MRNIDINSVDDLPRDILALGSDYPYDTLLEAHHHRRAQFLYAPSGVMKVKTEDGQWIVLPYSGVWIPAEKVHQVLMLGSSTYSLYIEPNKIPRHSEYCEVLQVSPLLHQLLLSANELPLLYDLGGRDSALLTLLCHELSQAKPLPYFTPLPQHALLDELCTEFMSRPNIRTTPEMWAEKLNKSLRTFTRLFHKETGLSFRDWRQKACLMYALTALKKGDSVTEVALELGYENPSAFSAMFNKEMGYSPKLFLKRLKEF
>NZ_CP053044.1|WP_109419083.1|1266354_1266558_+|hypothetical-protein
MNMVVIDKELRNILCMALKKLNGWLLRINSSKVKEGIRNYSDYSRNQTIVLQLLLNILCLYTVIVCS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_CP039965	Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence	1369011-1369038	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	392006-392033	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	234009-234036	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	234093-234120	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	MN310546	Microbacterium phage PhriedRice, complete genome	6113-6140	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	MT310890	Microbacterium phage Phedro, complete genome	6113-6140	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	MT310889	Microbacterium phage Phractured, complete genome	6113-6140	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	MT310891	Microbacterium phage Pharky, complete genome	6113-6140	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	CP040467	Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence	213362-213389	6	0.786
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	306272-306299	7	0.75
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_AP014579	Burkholderia sp. RPE67 plasmid p1, complete sequence	391880-391907	7	0.75
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NC_016626	Burkholderia sp. YI23 plasmid byi_1p, complete sequence	98640-98667	7	0.75
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	444273-444300	7	0.75
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_CP021115	Rhodobacteraceae bacterium strain G7 plasmid unnamed1, complete sequence	78385-78412	7	0.75
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NZ_CP041158	Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence	57142-57169	8	0.714
NZ_CP053044_1	1.1\|251891\|28\|NZ_CP053044\|CRISPRCasFinder	251891-251918	28	NC_017957	Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence	295428-295455	8	0.714

1. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_CP039965 (Pseudorhodobacter sp. S12M18 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
aggcggtggccacgatcacgctcatggc	Protospacer
 *************.***** ****

2. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

3. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

4. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacgggcacggc	Protospacer
*****.*************** **.

5. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to MN310546 (Microbacterium phage PhriedRice, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

6. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to MT310890 (Microbacterium phage Phedro, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

7. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to MT310889 (Microbacterium phage Phractured, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

8. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to MT310891 (Microbacterium phage Pharky, complete genome) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
gggcggtggccacggtcaccgtccctgt	Protospacer
 ****************** *** .*

9. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to CP040467 (Streptomyces albidoflavus strain UYFA156 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.786

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtgaccacggtctcggtcggccc	Protospacer
********.******** *****. .*

10. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtggcctcgctcacggtcgcgac	Protospacer
*********** ** ********..

11. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcgatggccacggtcacggcgacggt	Protospacer
*****.***************. *.

12. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
tggcggtggcctcgctcacggtcgcgac	Protospacer
*********** ** ********..

13. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
cggcgatggccatggtcacggtcacggc	Protospacer
.****.******.***********.

14. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_CP021115 (Rhodobacteraceae bacterium strain G7 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

tggcggtggccacggtcacggtcattca	CRISPR spacer
atgcggtggccacgatcacgctcatcgc	Protospacer
  ************.***** ****.

15. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NZ_CP041158 (Leisingera aquaemixtae strain R2C4 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.714

tggcggtggccacggtcacggtcattca	CRISPR spacer
gatcggcggccacggtcacggtcacgac	Protospacer
 . ***.*****************.

16. spacer 1.1|251891|28|NZ_CP053044|CRISPRCasFinder matches to NC_017957 (Tistrella mobilis KA081020-065 plasmid pTM1, complete sequence) position: , mismatch: 8, identity: 0.714

tggcggtggccacggtcacggtcattca	CRISPR spacer
cggcggtggccgcggtcacggtggcggg	Protospacer
.**********.********** ..  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

829400 : 935564

107

Proteus_phage(29.63%)

tail,head,holin,portal,terminase,protease,lysis,integrase,plate,capsid,tRNA

attL 856458:856481|attR 897451:897474

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075673315.1\|829400_829880_-\|tRNA	Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK	NA	NA	NA	NA
WP_075673316.1\|829914_830724_-	TraB/GumN family protein	NA	NA	NA	NA
WP_159242310.1\|830833_832303_-	YadA-like family protein	NA	NA	NA	NA
WP_159242311.1\|832676_835619_-	copper-exporting P-type ATPase CopA	A0A218MNH6	uncultured_virus	5.9e-115	36.7
WP_075673930.1\|835751_836165_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA
WP_075673931.1\|836118_836607_-	NfeD family protein	NA	NA	NA	NA
WP_075673932.1\|836609_837533_-	SPFH/Band 7/PHB domain protein	NA	NA	NA	NA
WP_075673933.1\|837570_838428_-	co-chaperone YbbN	NA	NA	NA	NA
WP_159242312.1\|838512_839298_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_075673935.1\|839348_839978_-\|protease	multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1	NA	NA	NA	NA
WP_075673936.1\|839948_840635_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	8.5e-09	28.7
WP_156733951.1\|840631_843073_+	ABC transporter permease	NA	NA	NA	NA
WP_159242313.1\|843161_845324_-	ornithine decarboxylase	NA	NA	NA	NA
WP_075673939.1\|845500_846526_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_099660093.1\|846593_847853_-	MFS transporter	NA	NA	NA	NA
WP_075673941.1\|847976_849044_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_075673942.1\|849040_849562_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	NA	NA	NA
WP_075673943.1\|849696_850419_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_036934689.1\|850431_850926_-	peptidylprolyl isomerase B	NA	NA	NA	NA
WP_075673944.1\|851301_852693_+\|tRNA	cysteine--tRNA ligase	A0A2K9L6B7	Tupanvirus	4.7e-38	32.3
WP_075673945.1\|852782_853226_-	hypothetical protein	NA	NA	NA	NA
WP_075673946.1\|853460_854402_-	1-phosphofructokinase	NA	NA	NA	NA
WP_075673947.1\|855054_855267_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_075673948.1\|855270_856143_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.7e-34	36.8
856458:856481	attL	NA	NA	NA	NA
WP_099660096.1\|856486_856675_-	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_159242337.1\|856728_857166_-	SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	1.5e-62	77.5
WP_159242314.1\|857185_857407_-	hypothetical protein	NA	NA	NA	NA
WP_159242315.1\|857409_857988_-	hypothetical protein	A0A077SLQ8	Escherichia_phage	5.3e-36	44.4
WP_159242316.1\|857989_858445_-	hypothetical protein	A0A248SL53	Klebsiella_phage	2.3e-26	39.2
WP_159242317.1\|858453_858951_-	single-stranded DNA-binding protein	I3PGW4	Xanthomonas_phage	6.1e-49	59.4
WP_159242318.1\|859009_859837_-	DUF2303 family protein	A0A2R2Z323	Escherichia_phage	3.8e-80	56.6
WP_006533955.1\|859902_860277_-	hypothetical protein	Q8HAA1	Salmonella_phage	4.6e-41	69.7
WP_099660100.1\|860687_861182_+	hypothetical protein	A0A077K9U2	Edwardsiella_phage	8.3e-14	30.5
WP_159242319.1\|861393_861597_-	hypothetical protein	NA	NA	NA	NA
WP_159242320.1\|861949_862612_-	helix-turn-helix domain-containing protein	A0A1R3Y604	Salmonella_virus	8.8e-19	55.6
WP_109395844.1\|862652_862865_+	helix-turn-helix domain-containing protein	Q76H55	Enterobacteria_phage	1.0e-21	66.7
WP_036900998.1\|862934_863393_+	hypothetical protein	K7PJS5	Enterobacterial_phage	6.0e-27	50.8
WP_159242321.1\|863481_863691_+	hypothetical protein	NA	NA	NA	NA
WP_109391850.1\|863680_863860_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	1.1e-11	58.6
WP_159242322.1\|863869_864991_+	replication protein 15	K7PLZ7	Enterobacterial_phage	6.8e-48	56.0
WP_159242323.1\|864987_865626_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	1.0e-80	63.1
WP_159242324.1\|865622_866015_+	hypothetical protein	NA	NA	NA	NA
WP_023582529.1\|866014_866185_+	Lar family restriction alleviation protein	NA	NA	NA	NA
WP_036904909.1\|866648_867452_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	9.7e-89	63.1
WP_159242325.1\|867448_868474_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	2.4e-84	45.6
WP_159242326.1\|868501_868885_+	antitermination protein	A0A088CD47	Shigella_phage	1.4e-48	69.8
WP_036934641.1\|869125_870292_+	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	8.6e-86	43.6
WP_115370633.1\|870411_870660_+	hypothetical protein	NA	NA	NA	NA
WP_109373189.1\|870988_871378_+	hypothetical protein	S4TRS4	Salmonella_phage	2.7e-12	35.9
WP_115065560.1\|871374_871674_+\|holin	phage holin family protein	S4TNV9	Salmonella_phage	1.7e-06	32.9
WP_115065559.1\|871651_872071_+	structural protein	A0A2R3UAM8	Myoviridae_environmental_samples	4.4e-24	45.5
WP_115065558.1\|872270_872849_+	hypothetical protein	A0A0H4IQ87	Shigella_phage	4.0e-68	66.1
WP_159242338.1\|872919_873294_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.2e-17	44.6
WP_036904935.1\|873540_873744_-	KTSC domain-containing protein	NA	NA	NA	NA
WP_159242327.1\|874684_875032_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	6.3e-61	95.7
WP_017827278.1\|875237_875696_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	2.1e-27	55.4
WP_159242328.1\|875698_877429_+\|terminase	terminase large subunit	Q8W631	Enterobacteria_phage	8.5e-207	60.8
WP_109372933.1\|877438_877618_+	hypothetical protein	A0A1B5FP99	Escherichia_phage	8.9e-11	59.3
WP_159242329.1\|877617_878847_+\|portal	phage portal protein	Q8W629	Enterobacteria_phage	2.2e-177	73.4
WP_170832166.1\|878824_879469_+\|head,protease	HK97 family phage prohead protease	Q8HAD3	Salmonella_phage	3.6e-94	79.9
WP_159242330.1\|879482_880691_+\|capsid	phage major capsid protein	M1FPN2	Enterobacteria_phage	6.9e-155	68.5
WP_023582511.1\|880786_881095_+\|head,tail	phage gp6-like head-tail connector protein	A0A1B5FP86	Escherichia_phage	3.7e-12	41.2
WP_023582510.1\|881091_881415_+\|head	phage head closure protein	A0A1P8DTK6	Proteus_phage	5.0e-52	94.4
WP_159242331.1\|881411_881852_+	HK97 gp10 family phage protein	A0A1P8DTH7	Proteus_phage	1.1e-73	99.3
WP_159242332.1\|881848_882184_+	hypothetical protein	A0A1P8DTJ3	Proteus_phage	7.7e-56	96.4
WP_159242333.1\|882249_882717_+\|tail	phage tail protein	A0A1P8DTJ5	Proteus_phage	2.8e-80	99.4
WP_088495895.1\|882719_883100_+\|tail	phage tail protein	A0A1P8DTJ2	Proteus_phage	7.9e-65	100.0
WP_159242334.1\|883123_883405_+	DUF4035 domain-containing protein	A0A1P8DTH5	Proteus_phage	3.1e-42	93.6
WP_159242335.1\|883424_886691_+\|tail	phage tail tape measure protein	A0A1P8DTH2	Proteus_phage	0.0e+00	82.4
WP_023582503.1\|886693_887026_+\|tail	phage tail protein	A0A1P8DTI9	Proteus_phage	2.1e-61	98.2
WP_171729888.1\|887019_887772_+\|tail	phage minor tail protein L	A0A1P8DTI3	Proteus_phage	4.5e-144	98.8
WP_159242339.1\|887777_888485_+	C40 family peptidase	A0A1P8DTI6	Proteus_phage	6.9e-139	98.7
WP_023582500.1\|888575_889076_+	hypothetical protein	A0A1P8DTJ8	Proteus_phage	1.9e-87	100.0
WP_171880504.1\|889132_889723_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	1.5e-102	98.0
WP_159287616.1\|889742_893411_+	DUF1983 domain-containing protein	A0A1P8DTI4	Proteus_phage	0.0e+00	91.6
WP_159242490.1\|893424_894921_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	2.1e-153	64.3
WP_159242488.1\|895758_896133_-	hypothetical protein	NA	NA	NA	NA
WP_087803148.1\|896198_897425_-\|integrase	site-specific integrase	A0A248SL35	Klebsiella_phage	1.1e-35	30.7
WP_075674158.1\|898122_898662_+	hypothetical protein	NA	NA	NA	NA
897451:897474	attR	NA	NA	NA	NA
WP_075674159.1\|898807_899116_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_099659264.1\|900188_900608_+	hypothetical protein	NA	NA	NA	NA
WP_075674162.1\|901099_902515_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_075674163.1\|902783_903311_+	hypothetical protein	NA	NA	NA	NA
WP_099659265.1\|903830_904124_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_171880505.1\|904267_905005_-	ankyrin repeat domain-containing protein	A0A0G2Y7V3	Acanthamoeba_polyphaga_mimivirus	1.9e-06	33.1
WP_075674115.1\|905414_906035_-	hypothetical protein	NA	NA	NA	NA
WP_159242466.1\|906045_907428_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_075674113.1\|907507_907942_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_099659268.1\|907944_908508_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_075674111.1\|908482_909580_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_159242465.1\|909543_911307_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_075674109.1\|911339_912962_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_159242463.1\|913007_916331_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_171880506.1\|916330_917728_-	hypothetical protein	NA	NA	NA	NA
WP_075674106.1\|917728_917983_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_159242460.1\|918021_920160_-	hypothetical protein	A0A077K801	Ralstonia_phage	1.4e-30	30.1
WP_099659274.1\|920171_920909_-	hypothetical protein	NA	NA	NA	NA
WP_075674103.1\|920962_923101_-	hypothetical protein	A0A077K801	Ralstonia_phage	1.6e-45	26.2
WP_159287617.1\|923179_923950_-	hypothetical protein	NA	NA	NA	NA
WP_159287618.1\|924108_924879_-	hypothetical protein	NA	NA	NA	NA
WP_159287619.1\|925040_925808_-	hypothetical protein	NA	NA	NA	NA
WP_159242456.1\|925807_928336_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	7.7e-15	34.0
WP_159242454.1\|928332_931044_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	8.9e-94	30.8
WP_023583757.1\|931329_931821_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_159242453.1\|931843_933583_-	OmpA family protein	NA	NA	NA	NA
WP_075674252.1\|933561_934230_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_075674251.1\|934226_935564_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_2

1368301 : 1374695

Enterobacteria_phage(25.0%)

holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075674218.1\|1368301_1369039_-	helix-turn-helix transcriptional regulator	A0A088CBP2	Shigella_phage	1.8e-57	46.3
WP_109849680.1\|1369277_1370093_+	antitermination protein	M9NZB0	Enterobacteria_phage	3.8e-56	44.8
WP_075674216.1\|1370455_1370764_+\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	3.1e-27	55.4
WP_075674215.1\|1370756_1371161_+	structural protein	A0A2I7RXE2	Vibrio_phage	4.5e-26	50.8
WP_075674214.1\|1371157_1371607_+\|lysis	lysis protein	M1FJ79	Enterobacteria_phage	4.3e-09	31.1
WP_159241950.1\|1371702_1372215_+	hypothetical protein	NA	NA	NA	NA
WP_159241951.1\|1372223_1373711_+	DUF3383 family protein	Q6IWV2	Burkholderia_phage	7.4e-58	30.8
WP_075674211.1\|1373721_1374174_+	hypothetical protein	B5M9T3	Pseudomonas_phage	1.1e-12	33.8
WP_075674210.1\|1374236_1374695_+	hypothetical protein	Q6IWV4	Burkholderia_phage	7.4e-25	47.6

DBSCAN-SWA_3

1377873 : 1386636

Pseudomonas_phage(14.29%)

plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_075674206.1\|1377873_1378686_+	hypothetical protein	W5S7J0	Pseudomonas_phage	1.5e-15	29.0
WP_075674205.1\|1378688_1379381_+	hypothetical protein	A1Z003	Burkholderia_virus	8.2e-36	35.6
WP_075674204.1\|1379377_1379722_+	hypothetical protein	NA	NA	NA	NA
WP_075674203.1\|1379714_1380902_+\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	6.5e-73	37.2
WP_159241953.1\|1380898_1381555_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	2.8e-41	42.3
WP_159241954.1\|1381560_1383027_+	hypothetical protein	A5X9J3	Aeromonas_virus	2.9e-22	62.4
WP_099660635.1\|1383073_1383988_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_036912664.1\|1384364_1384544_-	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_159241955.1\|1385242_1385785_+	DUF924 family protein	A0A1V0SIY0	Klosneuvirus	2.0e-21	35.3
WP_075674188.1\|1385859_1386636_-	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	6.6e-42	40.5

DBSCAN-SWA_4

1568850 : 1621757

Escherichia_phage(33.33%)

integrase,protease,transposase

attL 1588135:1588149|attR 1605779:1605793

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159241988.1\|1568850_1570323_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_075671888.1\|1570477_1571554_+	AI-2E family transporter	NA	NA	NA	NA
WP_075671886.1\|1571639_1572110_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_036912784.1\|1572127_1572685_-	glycine cleavage system transcriptional repressor	NA	NA	NA	NA
WP_023581903.1\|1572900_1573800_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_075671884.1\|1573816_1574863_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_075671882.1\|1575150_1575741_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_075671880.1\|1576263_1576977_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A127KMU1	Cyanophage	4.1e-38	37.0
WP_075671878.1\|1577133_1577745_-	glutathione S-transferase	NA	NA	NA	NA
WP_075671876.1\|1577837_1578536_-	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	6.0e-10	27.7
WP_075671874.1\|1578760_1579645_+	neutral zinc metallopeptidase	NA	NA	NA	NA
WP_006533030.1\|1579706_1580159_+	DUF441 domain-containing protein	NA	NA	NA	NA
WP_159241989.1\|1580161_1582210_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_075671870.1\|1582172_1582382_-	YpfN family protein	NA	NA	NA	NA
WP_098942505.1\|1582480_1582864_+	DUF454 family protein	NA	NA	NA	NA
WP_075671866.1\|1582866_1583535_-	M15 family metallopeptidase	NA	NA	NA	NA
WP_109418869.1\|1583531_1584662_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA
WP_075671864.1\|1584667_1585039_-	ArsC family reductase	NA	NA	NA	NA
WP_075671863.1\|1585245_1585806_+	hypothetical protein	NA	NA	NA	NA
WP_075671862.1\|1585885_1586509_-	response regulator	NA	NA	NA	NA
WP_075671861.1\|1587065_1589348_+	NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase	NA	NA	NA	NA
1588135:1588149	attL	NA	NA	NA	NA
WP_075671859.1\|1589530_1590400_+	ChaN family lipoprotein	NA	NA	NA	NA
WP_159241990.1\|1590418_1591228_+	TonB family protein	NA	NA	NA	NA
WP_159241991.1\|1591256_1593425_+	prolyl oligopeptidase family serine peptidase	NA	NA	NA	NA
WP_159241992.1\|1593588_1595832_+	TonB-dependent receptor	NA	NA	NA	NA
WP_098942515.1\|1595939_1597322_-	exodeoxyribonuclease VII large subunit	A0A2H4UVM9	Bodo_saltans_virus	7.1e-39	34.2
WP_075671849.1\|1597491_1598958_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	2.3e-88	38.3
WP_098942517.1\|1599059_1600637_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_159241993.1\|1600943_1602152_+\|integrase	tyrosine-type recombinase/integrase	G9L697	Escherichia_phage	1.0e-121	53.9
WP_159241994.1\|1602433_1602664_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_159241995.1\|1602667_1603546_+	AAA family ATPase	NA	NA	NA	NA
WP_159241996.1\|1605052_1605427_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_159241997.1\|1605865_1606444_+	recombinase family protein	E5FFF9	Burkholderia_phage	4.0e-52	61.6
1605779:1605793	attR	NA	NA	NA	NA
WP_001067856.1\|1606928_1607633_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	6.9e-139	100.0
WP_001199192.1\|1607746_1608523_+	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA
WP_000742814.1\|1608751_1609777_+	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
WP_000602738.1\|1610198_1610951_-\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_044502095.1\|1612919_1613297_+	hypothetical protein	NA	NA	NA	NA
WP_159242446.1\|1613293_1614457_+	tetracycline-inactivating monooxygenase Tet(X)	NA	NA	NA	NA
WP_077782102.1\|1614474_1615335_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_001120888.1\|1615979_1617473_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_001447541.1\|1617503_1618388_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214122.1\|1618604_1619819_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001255015.1\|1619846_1620152_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001120888.1\|1620263_1621757_+\|transposase	IS91 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

2193306 : 2252693

Morganella_phage(20.0%)

tail,holin,terminase,lysis,integrase,capsid,tRNA

attL 2206899:2206958|attR 2252864:2252965

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159242171.1\|2193306_2195289_-	bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA	A0A2K9KZK0	Tupanvirus	8.7e-22	27.5
WP_075673352.1\|2195288_2196269_-	undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase	A8CG95	Salmonella_phage	1.1e-38	34.7
WP_099659662.1\|2196269_2197415_-	UDP-4-amino-4-deoxy-L-arabinose aminotransferase	A0A2K9L470	Tupanvirus	3.5e-39	28.8
WP_075673354.1\|2197548_2198298_-	ATP-binding cassette domain-containing protein	A0A2K9L090	Tupanvirus	7.1e-09	28.1
WP_099659661.1\|2198299_2199310_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_023582381.1\|2199689_2199986_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	4.2e-13	38.9
WP_075673356.1\|2199990_2202378_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	3.5e-09	27.4
WP_023582383.1\|2202392_2203376_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	4.9e-34	37.7
WP_120655563.1\|2203551_2203599_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_006537111.1\|2203707_2204064_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_004263702.1\|2204106_2204304_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_036937410.1\|2204398_2204938_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	3.7e-15	34.4
WP_075673357.1\|2204941_2206870_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	3.9e-128	37.2
2206899:2206958	attL	NA	NA	NA	NA
WP_159242439.1\|2207552_2207840_-	hypothetical protein	Q8H9M8	Vibrio_phage	7.6e-44	96.7
WP_171880527.1\|2207898_2208039_+	hypothetical protein	NA	NA	NA	NA
WP_171880597.1\|2208112_2209315_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	D4HTV7	Vibrio_phage	2.0e-210	92.4
WP_171880528.1\|2209682_2213306_-	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	63.8
WP_171880529.1\|2213305_2213872_-\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	3.1e-49	78.2
WP_171880530.1\|2213808_2214528_-	C40 family peptidase	A0A1W6JNU8	Morganella_phage	9.0e-110	74.5
WP_171880531.1\|2214531_2215230_-\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	5.3e-115	83.6
WP_171880532.1\|2215226_2215556_-\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	3.3e-43	73.4
WP_103004656.1\|2215702_2215960_+	hypothetical protein	NA	NA	NA	NA
WP_149127646.1\|2215956_2216163_-	hypothetical protein	NA	NA	NA	NA
WP_171880533.1\|2216178_2219547_-	tape measure protein	A0A1W6JNU2	Morganella_phage	4.5e-212	46.8
WP_171880534.1\|2219613_2219916_-	hypothetical protein	NA	NA	NA	NA
WP_171880598.1\|2219953_2220256_-	hypothetical protein	NA	NA	NA	NA
WP_171880535.1\|2220355_2220700_-	hypothetical protein	NA	NA	NA	NA
WP_171880536.1\|2220824_2221607_-	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	3.2e-44	45.3
WP_171880537.1\|2221683_2222256_-	hypothetical protein	H6WRU8	Salmonella_phage	1.8e-41	71.7
WP_171880538.1\|2222328_2222499_-	hypothetical protein	NA	NA	NA	NA
WP_171880539.1\|2222596_2222920_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_171880540.1\|2222992_2223685_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.9e-88	70.2
WP_171880541.1\|2223734_2224490_-	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	2.1e-101	76.9
WP_171880542.1\|2224554_2224923_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.1e-10	30.3
WP_171880543.1\|2224919_2225288_-	HK97 gp10 family phage protein	F1C5E3	Cronobacter_phage	2.4e-42	69.7
WP_171880544.1\|2225289_2225631_-	hypothetical protein	R9TRK0	Aeromonas_phage	5.9e-19	43.4
WP_171880545.1\|2225630_2226029_-	hypothetical protein	I6S619	Salmonella_phage	1.7e-54	77.3
WP_004247764.1\|2226085_2226259_-	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_171880546.1\|2226268_2227363_-	hypothetical protein	G0ZND9	Cronobacter_phage	1.4e-143	67.8
WP_171880547.1\|2227379_2227817_-	hypothetical protein	I6S1Q2	Salmonella_phage	3.8e-47	69.9
WP_171880548.1\|2227816_2229091_-	hypothetical protein	G0ZND7	Cronobacter_phage	2.9e-151	63.4
WP_171880549.1\|2229094_2230024_-\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	8.3e-92	56.6
WP_171880550.1\|2229974_2231330_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	2.0e-163	64.7
WP_171880551.1\|2231329_2232574_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	4.6e-186	74.0
WP_171880552.1\|2232554_2232977_-	hypothetical protein	A0A068CGC1	Acinetobacter_phage	1.7e-31	61.4
WP_004247755.1\|2232993_2233176_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	6.3e-20	74.1
WP_171880553.1\|2233168_2233327_-	hypothetical protein	NA	NA	NA	NA
WP_171880554.1\|2233357_2233888_-	Rha family transcriptional regulator	G8C7W4	Escherichia_phage	2.6e-50	56.4
WP_171880599.1\|2234258_2234627_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	1.1e-52	91.0
WP_094960058.1\|2234707_2235112_-	structural protein	A0A2I7RXE2	Vibrio_phage	2.0e-26	50.8
WP_170833859.1\|2235104_2235413_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	6.0e-31	61.8
WP_161681235.1\|2235583_2235829_-	hypothetical protein	NA	NA	NA	NA
WP_171880555.1\|2236140_2236644_-	DUF1133 family protein	A0A1P8DTF1	Proteus_phage	6.3e-86	93.4
WP_171880556.1\|2236845_2237211_-	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	3.9e-37	63.2
WP_161769587.1\|2237207_2237498_-	DUF1364 family protein	A0A220NQY2	Salmonella_phage	1.3e-38	78.9
WP_159262704.1\|2237490_2237643_-	hypothetical protein	NA	NA	NA	NA
WP_171880557.1\|2237735_2238176_-	DUF1828 domain-containing protein	A0A1P8DTF9	Proteus_phage	3.5e-32	52.3
WP_171880558.1\|2238297_2238522_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	1.0e-24	75.4
WP_171880559.1\|2238527_2238974_-	recombination protein NinB	E5AGF7	Erwinia_phage	4.1e-36	55.2
WP_171880560.1\|2239185_2239440_-	Lar family restriction alleviation protein	A0A1P8DTF4	Proteus_phage	6.7e-44	95.2
WP_171880561.1\|2239436_2239610_-	hypothetical protein	NA	NA	NA	NA
WP_171880562.1\|2239796_2240078_-	hypothetical protein	NA	NA	NA	NA
WP_171880600.1\|2240097_2241465_-	replicative DNA helicase	I6R0N4	Salmonella_phage	9.5e-161	64.0
WP_171880601.1\|2241467_2242334_-	replication protein	G9L680	Escherichia_phage	1.3e-57	43.2
WP_164484703.1\|2242380_2242557_-	hypothetical protein	NA	NA	NA	NA
WP_171880563.1\|2242653_2242995_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	7.9e-48	91.0
WP_049257589.1\|2243158_2243368_-	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	1.8e-31	94.2
WP_161706179.1\|2243450_2244134_+	helix-turn-helix domain-containing protein	A0A1P8DTH0	Proteus_phage	1.2e-127	95.6
WP_154640079.1\|2244186_2245032_+	protein rexA	M1FPD4	Enterobacteria_phage	1.4e-58	45.8
WP_171880564.1\|2245056_2245488_+	biopolymer transporter ExbB	M1FPN8	Enterobacteria_phage	3.4e-32	57.2
WP_171880565.1\|2245911_2246229_+	hypothetical protein	A0A1W6JNZ0	Morganella_phage	8.7e-17	50.5
WP_171880566.1\|2246249_2246621_+	hypothetical protein	NA	NA	NA	NA
WP_171880567.1\|2246643_2246808_+	hypothetical protein	A0A1W6JP47	Morganella_phage	1.0e-13	59.3
WP_171880568.1\|2247028_2247304_+	hypothetical protein	NA	NA	NA	NA
WP_171880569.1\|2247300_2247453_+	hypothetical protein	NA	NA	NA	NA
WP_171880570.1\|2247449_2247770_+	hypothetical protein	NA	NA	NA	NA
WP_171880571.1\|2247771_2248386_+	ERF family protein	A0A1W6JP21	Morganella_phage	5.9e-86	77.9
WP_171880572.1\|2248385_2248868_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	2.6e-52	81.7
WP_171880573.1\|2248900_2249062_+	hypothetical protein	NA	NA	NA	NA
WP_123822252.1\|2249102_2249438_+	hypothetical protein	A0A1C9LVV9	Vibrio_phage	1.1e-25	39.9
WP_171880574.1\|2249524_2249713_+	hypothetical protein	NA	NA	NA	NA
WP_171880575.1\|2249705_2250068_+	hypothetical protein	NA	NA	NA	NA
WP_171880576.1\|2250067_2250295_+	hypothetical protein	NA	NA	NA	NA
WP_171880577.1\|2250281_2250884_+	DNA methyltransferase	G8C7S6	Escherichia_phage	4.2e-60	58.6
WP_171880578.1\|2250891_2251098_+	DUF4060 family protein	NA	NA	NA	NA
WP_109372516.1\|2251302_2251536_+	hypothetical protein	A0A1P8DTG1	Proteus_phage	8.3e-41	100.0
WP_171880579.1\|2251511_2252693_-\|integrase	site-specific integrase	A0A1P8DTG6	Proteus_phage	6.8e-224	98.0
2252864:2252965	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2314165 : 2331818

Yersinia_phage(15.38%)

tail,head,portal,terminase,protease,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_109418983.1\|2314165_2317924_-	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	3.7e-199	51.6
WP_159242473.1\|2317923_2318322_-	hypothetical protein	A0A059VK01	Pseudomonas_phage	2.1e-31	47.0
WP_012367795.1\|2318378_2318960_-	hypothetical protein	Q7Y3Z7	Yersinia_phage	4.0e-52	50.0
WP_109418985.1\|2318959_2319556_-	hypothetical protein	S4TSP7	Salmonella_phage	2.1e-51	52.8
WP_109418986.1\|2319556_2322832_-\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	4.9e-54	46.7
WP_004242485.1\|2322958_2323150_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_041701216.1\|2323174_2323453_-	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_109418987.1\|2323449_2323866_-	hypothetical protein	NA	NA	NA	NA
WP_109418988.1\|2323930_2324596_-	hypothetical protein	NA	NA	NA	NA
WP_109372567.1\|2324605_2324947_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_159242472.1\|2324952_2325426_-	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	3.3e-12	31.5
WP_012367787.1\|2325415_2325745_-\|head	phage head closure protein	NA	NA	NA	NA
WP_109418990.1\|2325744_2326044_-\|head,tail	phage head-tail connector protein	K7PKV5	Enterobacterial_phage	7.4e-34	65.3
WP_012367785.1\|2326082_2327249_-\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	9.6e-170	79.8
WP_020946083.1\|2327252_2327921_-\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	1.9e-82	65.3
WP_109418991.1\|2327938_2329207_-\|portal	phage portal protein	Q77W97	Enterobacteria_phage	1.9e-200	80.0
WP_109418992.1\|2329206_2330940_-\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	5.8e-147	46.2
WP_017628364.1\|2330893_2331361_-\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.6e-43	59.7
WP_004242468.1\|2331479_2331818_-	HNH endonuclease	F1C587	Cronobacter_phage	5.4e-41	67.9

DBSCAN-SWA_7

2335755 : 2350524

Morganella_phage(53.33%)

integrase,lysis

attL 2334070:2334084|attR 2357838:2357852

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2334070:2334084	attL	NA	NA	NA	NA
WP_109418994.1\|2335755_2336220_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	7.5e-25	49.0
WP_171880580.1\|2336222_2336381_-	hypothetical protein	NA	NA	NA	NA
WP_109418995.1\|2336362_2336833_-	lysozyme	A0A1W6JNW4	Morganella_phage	1.2e-51	64.5
WP_109418996.1\|2336832_2337102_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	2.7e-19	53.3
WP_109418997.1\|2337167_2337590_-	hypothetical protein	NA	NA	NA	NA
WP_109372591.1\|2338048_2338723_+	hypothetical protein	NA	NA	NA	NA
WP_109418998.1\|2338811_2339984_+	hypothetical protein	A0A1W6JNS5	Morganella_phage	4.8e-12	23.0
WP_098943205.1\|2340327_2340786_-	Hsp20 family protein	NA	NA	NA	NA
WP_004244726.1\|2341117_2341330_-	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	3.1e-26	81.4
WP_049219743.1\|2341669_2342068_-	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	54.3
WP_171880581.1\|2342095_2343121_-	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	1.6e-83	46.2
WP_109419000.1\|2343117_2343924_-	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	3.0e-90	62.5
WP_049219770.1\|2343945_2344461_-	hypothetical protein	U5P0A0	Shigella_phage	2.0e-23	44.2
WP_017628377.1\|2345018_2345198_-	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_072062657.1\|2345459_2345936_-	hypothetical protein	A0A1W6JP72	Morganella_phage	3.0e-45	60.4
WP_109419001.1\|2345973_2346180_-	cell division protein	NA	NA	NA	NA
WP_109419002.1\|2346280_2346913_+	LexA family transcriptional regulator	K7PLZ5	Enterobacterial_phage	1.5e-39	44.4
WP_100157866.1\|2347191_2347716_+	hypothetical protein	A0A1W6JP41	Morganella_phage	2.3e-54	61.0
WP_017628380.1\|2347801_2348053_+	excisionase	NA	NA	NA	NA
WP_109419003.1\|2348027_2349161_+\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	5.0e-155	72.2
WP_006537208.1\|2349270_2350524_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-20	90.7
2357838:2357852	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2800856 : 2811697

Mycobacterium_phage(22.22%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_159241856.1\|2800856_2802068_+	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	3.1e-102	48.1
WP_036912266.1\|2802268_2802532_+	YbeD family protein	NA	NA	NA	NA
WP_075671560.1\|2802692_2803337_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_075671558.1\|2803438_2804404_+	lipoyl synthase	NA	NA	NA	NA
WP_023581134.1\|2804417_2804792_+	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.5e-23	48.0
WP_023581133.1\|2804929_2805139_-	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	4.5e-22	74.2
WP_075671556.1\|2805336_2805810_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A167R6J9	Powai_lake_megavirus	5.0e-16	35.8
WP_075671554.1\|2806093_2806318_+	glutaredoxin family protein	V5UN81	Mycobacterium_phage	7.8e-12	45.7
WP_075671552.1\|2806329_2806749_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	8.0e-10	37.6
WP_099660164.1\|2806754_2808881_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.2e-202	50.4
WP_075671548.1\|2808905_2809874_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	7.5e-136	72.8
WP_075671546.1\|2810497_2811697_+	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	2.4e-27	36.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP053044

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection