CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP030944	Arcobacter aquimarinus strain W63 chromosome, complete genome	3 crisprs	cas6,PrimPol,DEDDh,csa3,cas3,WYL	1	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP030944_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030944_1

15755-15879

Orphan

Consensus_repeat	Method
GAATTTACAAATGTCAAGTGATAAGAAACCACAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030944_1

>merge|NZ_CP030944|1|15755-15879|CRISPRCasFinder
GAATTTACAAATGTCAAGTGATAAGAAACCACAAATGCCACCACCACCTAAACCTAGAATGATTAGAGAAGATACAAAAAAATAAAGGAGAATTTACAAATGTCAAGTGATAAGAAACCACAAAT

>NZ_CP030944|1|1|15755-15879|CRISPRCasFinder
GAATTTACAAATGTCAAGTGATAAGAAACCACAAAT	GCCACCACCACCTAAACCTAGAATGATTAGAGAAGATACAAAAAAATAAAGGA
GAATTTACAAATGTCAAGTGATAAGAAACCACAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030944.1\|WP_129095472.1\|20382_20640_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129095469.1\|23045_23531_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237082
NZ_CP030944.1\|WP_129095480.1\|14046_15066_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|236591
NZ_CP030944.1\|WP_129095483.1\|9181_10075_-\|RNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|211346
NZ_CP030944.1\|WP_164967057.1\|6081_6459_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	unknown	unknown	gnl\|CDD\|237320
NZ_CP030944.1\|WP_129095488.1\|4939_5941_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379355
NZ_CP030944.1\|WP_129095473.1\|18909_20235_-\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|183427
NZ_CP030944.1\|WP_129095481.1\|11532_13917_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236266
NZ_CP030944.1\|WP_129095478.1\|16106_16535_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|223894
NZ_CP030944.1\|WP_129095475.1\|17841_18330_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129095470.1\|22030_23041_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP030944.1\|WP_129095474.1\|18416_18887_+\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|143629
NZ_CP030944.1\|WP_129095484.1\|7995_9174_+\|YbfB/YjiJ-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340869
NZ_CP030944.1\|WP_129095482.1\|10189_11521_+\|adenylosuccinate-lyase	unknown	unknown	gnl\|CDD\|181437
NZ_CP030944.1\|WP_129095485.1\|7310_7718_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|224159
NZ_CP030944.1\|WP_129095486.1\|6470_7076_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP030944.1\|WP_129095477.1\|16536_16923_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319916
NZ_CP030944.1\|WP_129095471.1\|20636_21854_-\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236967
NZ_CP030944.1\|WP_129095489.1\|2585_4907_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|237860
NZ_CP030944.1\|WP_129095476.1\|17100_17826_-\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223489

Protein	Function_ID	Function_description	E-value
NZ_CP030944.1\|WP_129095469.1\|23045_23531_+\|hypothetical-protein	gnl\|CDD\|237082	PRK12373, PRK12373, NADH-quinone oxidoreductase subunit E.	2.78416e-25
NZ_CP030944.1\|WP_129095480.1\|14046_15066_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|236591	PRK09614, nrdF, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	1.13532e-134
NZ_CP030944.1\|WP_129095483.1\|9181_10075_-\|RNA-pseudouridine-synthase	gnl\|CDD\|211346	cd02869, PseudoU_synth_RluA_like, Pseudouridine synthase, RluA family. This group is comprised of eukaryotic, bacterial and archeal proteins similar to eight site specific Escherichia coli pseudouridine synthases: RsuA, RluA, RluB, RluC, RluD, RluE, RluF and TruA. Pseudouridine synthases catalyze the isomerization of specific uridines in a n RNA molecule to pseudouridines (5-ribosyluracil, psi) requiring no cofactors. E. coli RluC for example makes psi955, 2504 and 2580 in 23S RNA. Some psi sites such as psi1917 in 23S RNA made by RluD are universally conserved. Other psi sites occur in a more restricted fashion, for example psi2819 in 21S mitochondrial ribosomal RNA made by S. cerevisiae Pus5p is only found in mitochondrial large subunit rRNAs from some other species and in gram negative bacteria. The E. coli counterpart of this psi residue is psi2580 in 23S rRNA. psi2604in 23S RNA made by RluF has only been detected in E.coli.	1.8065e-54
NZ_CP030944.1\|WP_164967057.1\|6081_6459_+\|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF	gnl\|CDD\|237320	PRK13258, PRK13258, 7-cyano-7-deazaguanine reductase; Provisional.	3.4701e-60
NZ_CP030944.1\|WP_129095488.1\|4939_5941_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|379355	pfam13738, Pyr_redox_3, Pyridine nucleotide-disulphide oxidoreductase.	1.45857e-57
NZ_CP030944.1\|WP_129095481.1\|11532_13917_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236266	PRK08447, PRK08447, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP030944.1\|WP_129095478.1\|16106_16535_+\|acyl-CoA-thioesterase	gnl\|CDD\|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	1.44063e-29
NZ_CP030944.1\|WP_129095473.1\|18909_20235_-\|hydroxylamine-reductase	gnl\|CDD\|183427	PRK12310, PRK12310, hydroxylamine reductase; Provisional.	0
NZ_CP030944.1\|WP_129095470.1\|22030_23041_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	1.355e-34
NZ_CP030944.1\|WP_129095474.1\|18416_18887_+\|CYTH-domain-containing-protein	gnl\|CDD\|143629	cd07891, CYTH-like_CthTTM-like_1, CYTH-like Clostridium thermocellum TTM-like subgroup 1. This subgroup contains the triphosphate tunnel metalloenzyme (TTM) from Clostridium thermocellum (CthTTM) and similar proteins. These are found primarily in bacteria. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. These enzymes are members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily, which have a unique active site located within an eight-stranded beta barrel.	6.23566e-77
NZ_CP030944.1\|WP_129095484.1\|7995_9174_+\|YbfB/YjiJ-family-MFS-transporter	gnl\|CDD\|340869	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli YjiJ and other uncharacterized proteins. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.44493e-56
NZ_CP030944.1\|WP_129095482.1\|10189_11521_+\|adenylosuccinate-lyase	gnl\|CDD\|181437	PRK08470, PRK08470, adenylosuccinate lyase; Provisional.	0
NZ_CP030944.1\|WP_129095485.1\|7310_7718_+\|DedA-family-protein	gnl\|CDD\|224159	COG1238, COG1238, Predicted membrane protein [Function unknown].	3.15001e-31
NZ_CP030944.1\|WP_129095486.1\|6470_7076_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	0.00550711
NZ_CP030944.1\|WP_129095477.1\|16536_16923_+\|VOC-family-protein	gnl\|CDD\|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.13787e-61
NZ_CP030944.1\|WP_129095471.1\|20636_21854_-\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|236967	PRK11749, PRK11749, dihydropyrimidine dehydrogenase subunit A; Provisional.	0
NZ_CP030944.1\|WP_129095489.1\|2585_4907_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|237860	PRK14939, gyrB, DNA gyrase subunit B; Provisional.	0
NZ_CP030944.1\|WP_129095476.1\|17100_17826_-\|dienelactone-hydrolase-family-protein	gnl\|CDD\|223489	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism].	1.09064e-33

>NZ_CP030944.1|WP_129095480.1|14046_15066_+|ribonucleotide-diphosphate-reductase-subunit-beta
MERKTIYNPDSKESLNDRRIFGGNSDGMINFTKMKYQWALNLWDTMEANTWFPKEVQMTGDAKDYKFLTPAEKRMYDLVLSQLIFMDSLQTNNLMDNINPYITAPEINACLSRQSYEEANHSKSYAVMVESISDNTDLIYDMWKNDVKLREKNTYIAKVYKNLSGEITDEKIVLALFANQILEGLYFYAGFAAIYALGKSGKMLGSSQMIRFIQRDEVTHLLLFQNMINSVRKERPELFTTELEETVRAMFRKAVELESAWGAYITQGQILGFTDAIIKQYIQYLADRRLEAVGYKPEYNVKHPIPWVDGYASFNDQRTNFFEGNVVNYSKGSIDFDDF
>NZ_CP030944.1|WP_129095481.1|11532_13917_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MGIMIKKRNGRKEILDITKIQKMTIDATSDLEGVSQSELELDAQIKFIDGMSSSDIQDALIKTAVEKIDIDVPNWTFVAARLFVFDLYHRVGKSTHGIKGEPYCHLKDYLKYGKDAGRLIPNLGEGYDLDELNSYIDPKRDFLFNYLGIKTLYDRYLIKNNQGDPIELPQQMFMAIAMFLAQNETNKQQCAKEFYDVISKFEVMLATPTLSNARTNRHQLSSCYIGSSPDNIEGIFDGYKEMALLSKFGGGIGWDWTQIRALGGVIDNHKSAAGGTVPFLKITNDIALAVDQLGTRKGAIAVYLEPWHMDIVDFIDLKKNSGEERRRAHDLFPALWITDLFMERVLEDSHWTLFDPYEVKDLSECYGDEFKAKYIAYENDETITKNTMKAKDLWKKVLTSYFESGSPFLCFKDTANKANPNSHVGHIRSSNLCTEIFQNTNPNHYLIKLEFEDGMIETYEEEDLIVVDGGITKKANKVSALDSINGKKVFIVEKEKIDGDTAVCNLASVNLSRINTKEDIQRVVPIAIRMLDNVIDLNFYPLRKVKATNMKSRSIGLGVMGEAEMLAEYKLAWGSNEHFKMIDSIMEAISYNAIKSSSDLAIEKGIYPTFEGSKWSQGIMPHDHAPQAVNALVNKDLFDTGYDWDSLREKVKKDGMRNGYLMAVAPTSSISILVGTTQAIEPVYKRKWFEENLSGLIPVVVPKLSPETWNYYTPAFEIDQLQVIKAAAIRQKWIDQGQSTNIFMSLDKASGKYLHEIYTLAWKLGLKSTYYLRSQSPEAKNDVEDRSMECAGCQ
>NZ_CP030944.1|WP_129095482.1|10189_11521_+|adenylosuccinate-lyase
MVERYAREQMSSKWTQQARYAAWLEVEKAAVKAWNKLGLIPDEDCEKIVKNATFSVERIEEIEAITKHDLIAFNTSVSESLGEESRWFHYGMTSSDAVDTGVALQMRDSLEIIIEDVKMLMESIKIRAYEHKMTLMIGRSHGIHGEPITFGLTLAVWYDEVARHLKNLEETMEVIAVGQISGAMGNFAHAPLELEEYAMAELGLKPEPCSNQVIHRDRYARLATALALLASSVEKFAVQVRHLQRTEVYEAEEYFAKGQKGSSAMPHKRNPILTENITGLARMIRAYAVPAMENVALWHERDISHSSTERFWLPDAFITTDFMLHRMNNVIANLTVMPENMMKNLNLTGGLVFSQRVLLELPLAGVSREDAYRIVQRNAMKVWEEIQQGKPTTNEKGESLYLQYLLADEELRNSLSEEQIRECFNFDYYTKNVDKIFERVFNK
>NZ_CP030944.1|WP_129095483.1|9181_10075_-|RNA-pseudouridine-synthase
MPFTLKKHKAIVGKKIQIFLIQELGIEPKVGQRLTSKGRIFDENMNTINTGDTIPTEYIYIAVFEGATRGLKPLIEFNDFAIFDKPTNLMVHPISKNTPYSLLDEIRYHFGEDANLIHRIDAETSGLIIVGKNKKSEIELKDMFQEKKYHKSYLAIVQGKIKEEIKIDKGLDREGLAIGVRMKVCDDGKESVTIIKPIKYNKEKDLTLIEAIPLTGRQHQIRVHLHSIGHTILGDPIYGIDDVNAENYLNKTLSEEDRFKVTKSHRLWLHANYLEFTFKDVTYKIFSKNRDIYKEFK
>NZ_CP030944.1|WP_129095484.1|7995_9174_+|YbfB/YjiJ-family-MFS-transporter
MNRLLNKDDNLSILIAGIFAIIVGIGVARFAFTSLIPSMLQDYLDITFAGILASLNFAGYLTGSILSVFIKDINQKVVLFRIGLVLAILTTFVLGFSTNETYWIIARIIAGFAGAMALVVGSAIVMTKLKIESKTKAMGIHFSGIGFSILTTDLLNRYILSSGGTWQESWKVLAIFGAILSIYSIYILSFDKEVKQNVVKHKFDISIFTIFVILLIMAYFTEGVGFVVQGTFLPDIINNLPGLEGYGNLTWTLVGLAGIPSCIIWMRLAHKYGSVNIIIIALLIQMVGILIPTFTNNIYLNLLSGIFYGGTFVGLVALFMNLGGQLAKHNPVVLMGALTTSYGIGQVIAPLYSVYLIEKYGNYDYALYLTAFIVFGGVLLLLIAKKFQTQRV
>NZ_CP030944.1|WP_129095485.1|7310_7718_+|DedA-family-protein
MTYLILFISAFLSATLLPFGSEALLIYNISEGYDIYLLLFFATLGNSLGSILNYYLGLKGEEYLIEKKLLKEKYINISKKYFDKYGFLSILFAWVPIIGDPITFVAGVLKYDFKKFVILIIISKFSRYLFIALII
>NZ_CP030944.1|WP_129095486.1|6470_7076_+|helix-turn-helix-domain-containing-protein
MERLVTTSQAAEILGLSLQGIHYRIKKNQLKSIKKDGKIFVYVDDSKKVYQQEQKVEAIKQESNFNNYEAVIEVKNEQIELLKKSMKWMKKQYISEIFRLEKNQKRIIEVFNSEIKLLQSAFNEMRSIYKPQIEQKISEQKQNSGFIALKDFFILMKRENKSDKEIKHIIFEAIKNGDKRFIYNKIEKKLLILDSNFEDLI
>NZ_CP030944.1|WP_164967057.1|6081_6459_+|NADPH-dependent-7-cyano-7-deazaguanine-reductase-QueF
MKYGEQEILDFNIDNEENFWPNQHEKNYVIDIELPEFMAKCPRSGYPDFATIKIQYTPNKKVIELKALKIYINSFMNRYISHENSANEIFDILYTKLEPKWLKVIADFKPRGNVHTVIEIDSSKM
>NZ_CP030944.1|WP_129095488.1|4939_5941_-|NAD(P)-binding-domain-containing-protein
MKDKIYDVVIIGGGPGGIGCAIEASAHKIGEILLIEKSDNHSNTIRKFYKDNKRVDKDYKGQVTTLQGNVDFFDGTKETTIDYFNDLLDNEKIDSIFNTEVEKIIRNEKTDLLEVHTSKGIIQTKNAIVAIGKMGKPNKPDYKIPPSIKPFVNFNLDHCSSNEKILVVGGGNSAAEYAYHLADENNNVTLVYRKATFSRLNDLNEDLLRKYNGEEKLRLRMNTDIESLENEDGKVKVTFNDGFNVIYDRIIYAIGGTTPVDFLKACGIEVDKDLKPIFDEHQETTAKDIYVAGDIAFASGGSIAIALNHGYHIVNNILRKRGKIFAHTEKFSN
>NZ_CP030944.1|WP_129095489.1|2585_4907_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNTNGLHHLVYEVVDNSIDEAMAGYCKNIKITMGKDNWIKVEDDGRGIPTAIHEGEGISAATVVLTVLHAGGKFDKDTYKVSGGLHGVGVSVVNALSKHLKMTIYREGKIHYQEFKCGIPQGPLEIIGDSPRKTGTTIEFLADDTIFEVTKYEFSILAKRFREVAYLNSFISITLDNEITKTKEVYHFEGGIKQFVEDMNKDTAVCDAVSFNDTIEGVEVDIAVMYNDTYVEKTLSFVNNIRTIDGGTHEAGFKAGLTRSIVKYLNENAAAREKDTKITGDDVREGLIAVISVKVPEPQFEGQTKSKLGSSYVKAITQKLTGDALDKYFEENPTQAKAIMEKALMAARGREAAKKARDLTRKKDAMSVGTLPGKLAECQSKDPAIRELYLVEGDSAGGSAKQGRDRVFQAILPLKGKILNVEKSRLDKILKSDEIRNMITALGCGIGEDFDDEKIRYHKIIIMTDADVDGSHIQTLLLTFFFRFLRPVIEKGYLYIAQPPLYRYKKGKNEIYLKDDSALSAFLIENGLESFSFEGLGYNDLLDLFKIVARYRGMLGQLGKRYSLLEVLKYLIENNDLVNLDFPALYEKIKEYLDAKGYNILSKTILEDKIQLFVQTNEGLEELIIDEELFASPYFSEATYIYSKLVERDLTVFEGRDLLDILDDIETLAKKGAYIQRYKGLGEMNPEQLWETTMIPENRRLLRVKIEDAEVASDTFTLFMGDEVEPRRNYIEEHAKDVEHLDV
>NZ_CP030944.1|WP_129095478.1|16106_16535_+|acyl-CoA-thioesterase
MFTEIIKPRFLETDALGHINNNTYGVWFEAARDDIFHIFMPKANIKEWNLIMAHSSFDFLKEVFWGKEVIIKTGISKLGNSSIELCHAVYQDGKLCTTGKCVLIHYDFTTKVAVRIPDNIRIELEKHLFMKPWSATLEELED
>NZ_CP030944.1|WP_129095477.1|16536_16923_+|VOC-family-protein
MIKVNRLDHLVLTVKDIDKTVDFYTKVLGMEKEIFKENRVALKFANQKINLHKLGNEFDPKAFNVKSGSADLCFIIDIPLIEAKNYIELLGIKIEEGIVNRTGAMGEIESIYLRDPDKNLIELSNYKN
>NZ_CP030944.1|WP_129095476.1|17100_17826_-|dienelactone-hydrolase-family-protein
MKKLIFTALSLSSFVFAQNITYKIDGKEYEGYYKSPSKDAPLVYMVHDWDGITDYEIKRADMLNELGYAVFAVDLYGKGIRPTALEDKKAMTKSLYENRTEMRKRLDVGLEEAKKLGANTQNAVGMGYCFGGSSILEFARSGKDLKAFIPFHGNLATPTGQDYKNTKGKVVVFHGTADVVVPMSEFSDLAVELEKTEIEHEMITYSKAPHAFSVFGSKSYREDADKKSWKRFTEVLEETLK
>NZ_CP030944.1|WP_129095475.1|17841_18330_-|hypothetical-protein
MKTIIAMFVFLGSVFASELPEEFDRLLYDKGEKVFENKCMECHQKSMPIPLLMKNFIEENNKLLNLKAPTGNEISFRLKQQIGSRDDMEFHLHQTEDFLKDYLYNPDLSKTICLEGVIRHFEVMPSMKGKISEEEISKVNHFLYFLEGFNGVNKFYHDETKF
>NZ_CP030944.1|WP_129095474.1|18416_18887_+|CYTH-domain-containing-protein
MPLEIERKYLVDLEKLGTLENGNRIKQGYLSTNKDAVVRVRVKNDKAYLTIKGSNIGATRLEFEYEIPVDEANEMLDKLCQKPVIDKTRYLIDYENHTFELDIFYGDNDGLVVAEVELLDENETIKLPSWIKEEVTSDERYYNSNLMKNPYKNWKK
>NZ_CP030944.1|WP_129095473.1|18909_20235_-|hydroxylamine-reductase
MSMFCYQCEMSQKGGCGSTGATVGTCGKDENLSRLQDIMIFGLKGLSAYREHLNTFKPELTKEIDDVMSETLYFTLTNVNFNFNDHINQLMKVGSAGVKVMNLLGEAHTNRFGIPTPVRVPQNKVEGKAILVSGHDLEFFEKLLIATEDKGINVYTHSEMLPAHGYPELRKFKHLKGNVGKAWFDQAKLMEKFTGTFVVNTNCIVPPKKNCSYIDRVFTHKIVGIEGSTPIENYDFTELIERTLACEPANGIDLNEDTTLVTGHNYKTVLTLAPQILKAIEEGKIKQFFVVAGCDAPGKPGEYYRELTQNLPKDTVILTSSCGKFRFNDIDFGEIEGTGIPRYLDLGQCNDSYGAVEIAKALSDALKTPINDLPVSIVLSWMEQKAVIILLALFSLGVKNIYLGPKPPQFVNEDIFNFLAQNFNLTLTTNAKDDLKKLLIA
>NZ_CP030944.1|WP_129095472.1|20382_20640_+|hypothetical-protein
MSKERIKDFIDKQLENLDNFSYKLEEDENHIYAIFSEILSKYTNKELTFKLLDDVLYLHSITYGWKPVEKGVANKYFWLEILNKA
>NZ_CP030944.1|WP_129095471.1|20636_21854_-|NAD(P)-dependent-oxidoreductase
MQHIINSAQTCLDCKKPKCQKGCPVGTPIADMIRLFLSGNIKEAGEMVFNNNPLSIICSLVCPHEKHCEGHCVLNKKLSPVNVGGIENYISTYYMNYREFEKPVQNGRNLAIIGSGPAGISLAMMMAIKGYNVTMYEGNNQIGGVLRYGIPDFRLDKTIIDKIEENLKKLGVKIRKNIMIGKNITIDDLQRDGFDAIFIGTGVWAPKKLGIKGESLGNVHFAIDYLKTPKAYDLGKKVVVVGAGNVAMDVARTAIRNGARDVSIMYRKGEENMPAERIEIEHAKIDGVKFNLYKSPIEFTENGIKYENTKEDDTSEGFEKADTILIAISQTARDLIVRHNSGLSLGENGLLQSDENGVTTRDGVFASGDVVTGARTVVEAVAFSKRVAISIEEYINNLPPKNKAC
>NZ_CP030944.1|WP_129095470.1|22030_23041_+|OmpA-family-protein
MSLARKILFLLVFFIFLNIYSIYGFDYNSYFEEKSNTISFVKSDDNFLDKIKNYFKQEEESKFLELVLEKKSGVVVMSGVFPKQNDAHKIADLLDVNREGDYKYEENIIIDEHLITELTNLITPFKDFFSDDSKIVVSNNEVILKGELKDANYKELLNTIISRMNIDIKNELSDEIKAEEVIVLNNEEEKVEEKIETPVVEEVVESKVVDIKSQIEELQSKINNILLEKKITFERRSTELTADSKSVVEDISKILKEYPTLNFEIAGHTDSRGNDDLNKKISQDRANSVKNLLISFGIDENRIKAVGYGEEFPIAKDDENGLSETNRRVEFNILGE
>NZ_CP030944.1|WP_129095469.1|23045_23531_+|hypothetical-protein
MFEVASQIVINLLIACFIGFLAGYIVAKSRSSKIKAISNEKSENFIDDPKVRTSINPIFKKGFSVDNKPLVLSFPKSTGKDNLKKIKGINSRIEAELNNLGIYHFEQIAKWSNKNCDWIEAFLDIPGSIKNNQWLDQAKILQTGNETIYSQKVVDGEIEVD

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Crispr_ID: NZ_CP030944_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030944_2

363795-363890

Orphan

Consensus_repeat	Method
ATTTTTTCTAAATATTGTTCTTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP030944_2

>merge|NZ_CP030944|2|363795-363890|CRISPRCasFinder
ATTTTCTCTAAATCTTTTATTTTTTCTAAATATTGTTCTTTTCTTGAAGTTACAAAATTTATTCTATCTTCATTTATTTCTAAATATTGTTCTTTT

>NZ_CP030944|2|2|363795-363890|CRISPRCasFinder
ATTTTCTCTAAATCTTTTATTTTT	TCTAAATATTGTTCTTTTCTTGAAGTTACAAAATTTATTCTATCTTCA
TTTATTTCTAAATATTGTTCTTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030944.1\|WP_129094399.1\|377185_377707_-\|NADH-quinone-oxidoreductase-subunit-J	unknown	unknown	gnl\|CDD\|235844
NZ_CP030944.1\|WP_128985251.1\|370967_371768_-\|fumarate-reductase-cytochrome-b-subunit	unknown	unknown	gnl\|CDD\|237423
NZ_CP030944.1\|WP_129094408.1\|363156_363726_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094398.1\|377699_378206_-\|NADH-quinone-oxidoreductase-subunit-I	unknown	unknown	gnl\|CDD\|235637
NZ_CP030944.1\|WP_129094417.1\|353603_354635_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|225439
NZ_CP030944.1\|WP_129094400.1\|376868_377183_-\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_CP030944.1\|WP_129094406.1\|365802_368154_-\|dynamin-family-protein	unknown	unknown	gnl\|CDD\|206739
NZ_CP030944.1\|WP_129094405.1\|368251_368983_-\|fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|184136
NZ_CP030944.1\|WP_129094401.1\|374985_376872_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP030944.1\|WP_129094402.1\|373496_374984_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_CP030944.1\|WP_129094409.1\|362411_363149_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094414.1\|357221_359327_+\|DNA-helicase-RecQ	unknown	unknown	gnl\|CDD\|273594
NZ_CP030944.1\|WP_129094410.1\|361912_362404_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|224368
NZ_CP030944.1\|WP_129094416.1\|354641_355862_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP030944.1\|WP_129094413.1\|359327_360116_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP030944.1\|WP_129094404.1\|368982_370968_-\|fumarate-reductase-flavoprotein-subunit	unknown	unknown	gnl\|CDD\|181507
NZ_CP030944.1\|WP_129094403.1\|371979_373500_-\|NADH-quinone-oxidoreductase-subunit-N	unknown	unknown	gnl\|CDD\|235603
NZ_CP030944.1\|WP_129094411.1\|360727_361840_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340825
NZ_CP030944.1\|WP_129094415.1\|356021_357221_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|224294
NZ_CP030944.1\|WP_129094412.1\|360118_360679_-\|HPP-family-protein	unknown	unknown	gnl\|CDD\|377434

Protein	Function_ID	Function_description	E-value
NZ_CP030944.1\|WP_129094399.1\|377185_377707_-\|NADH-quinone-oxidoreductase-subunit-J	gnl\|CDD\|235844	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J.	4.7788e-32
NZ_CP030944.1\|WP_128985251.1\|370967_371768_-\|fumarate-reductase-cytochrome-b-subunit	gnl\|CDD\|237423	PRK13553, PRK13553, fumarate reductase cytochrome b subunit.	1.30397e-160
NZ_CP030944.1\|WP_129094398.1\|377699_378206_-\|NADH-quinone-oxidoreductase-subunit-I	gnl\|CDD\|235637	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI.	5.19871e-44
NZ_CP030944.1\|WP_129094417.1\|353603_354635_-\|OmpA-family-protein	gnl\|CDD\|225439	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane].	1.15087e-19
NZ_CP030944.1\|WP_129094400.1\|376868_377183_-\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	9.77211e-29
NZ_CP030944.1\|WP_129094406.1\|365802_368154_-\|dynamin-family-protein	gnl\|CDD\|206739	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins. The dynamin family of large mechanochemical GTPases includes the classical dynamins and dynamin-like proteins (DLPs) that are found throughout the Eukarya. This family also includes bacterial DLPs. These proteins catalyze membrane fission during clathrin-mediated endocytosis. Dynamin consists of five domains; an N-terminal G domain that binds and hydrolyzes GTP, a middle domain (MD) involved in self-assembly and oligomerization, a pleckstrin homology (PH) domain responsible for interactions with the plasma membrane, GED, which is also involved in self-assembly, and a proline arginine rich domain (PRD) that interacts with SH3 domains on accessory proteins. To date, three vertebrate dynamin genes have been identified; dynamin 1, which is brain specific, mediates uptake of synaptic vesicles in presynaptic terminals; dynamin-2 is expressed ubiquitously and similarly participates in membrane fission; mutations in the MD, PH and GED domains of dynamin 2 have been linked to human diseases such as Charcot-Marie-Tooth peripheral neuropathy and rare forms of centronuclear myopathy. Dynamin 3 participates in megakaryocyte progenitor amplification, and is also involved in cytoplasmic enlargement and the formation of the demarcation membrane system. This family also includes mitofusins (MFN1 and MFN2 in mammals) that are involved in mitochondrial fusion. Dynamin oligomerizes into helical structures around the neck of budding vesicles in a GTP hydrolysis-dependent manner.	1.03783e-26
NZ_CP030944.1\|WP_129094405.1\|368251_368983_-\|fumarate-reductase-iron-sulfur-subunit	gnl\|CDD\|184136	PRK13552, frdB, fumarate reductase iron-sulfur subunit; Provisional.	3.00228e-176
NZ_CP030944.1\|WP_129094401.1\|374985_376872_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_CP030944.1\|WP_129094402.1\|373496_374984_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	1.04557e-139
NZ_CP030944.1\|WP_129094414.1\|357221_359327_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP030944.1\|WP_129094410.1\|361912_362404_-\|M48-family-metallopeptidase	gnl\|CDD\|224368	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only].	3.88928e-25
NZ_CP030944.1\|WP_129094416.1\|354641_355862_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	0.000907917
NZ_CP030944.1\|WP_129094413.1\|359327_360116_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.47379e-10
NZ_CP030944.1\|WP_129094404.1\|368982_370968_-\|fumarate-reductase-flavoprotein-subunit	gnl\|CDD\|181507	PRK08626, PRK08626, fumarate reductase flavoprotein subunit; Provisional.	0
NZ_CP030944.1\|WP_129094403.1\|371979_373500_-\|NADH-quinone-oxidoreductase-subunit-N	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	1.10956e-108
NZ_CP030944.1\|WP_129094411.1\|360727_361840_-\|glycosyltransferase	gnl\|CDD\|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	7.06718e-17
NZ_CP030944.1\|WP_129094415.1\|356021_357221_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|224294	COG1376, ErfK, Uncharacterized protein conserved in bacteria [Function unknown].	1.44933e-18
NZ_CP030944.1\|WP_129094412.1\|360118_360679_-\|HPP-family-protein	gnl\|CDD\|377434	pfam04982, HPP, HPP family. These proteins are integral membrane proteins with four transmembrane spanning helices. The most conserved region of the alignment is a motif HPP. The function of these proteins is uncertain but they may be transporters.	1.0388e-53

>NZ_CP030944.1|WP_129094408.1|363156_363726_-|hypothetical-protein
MQITSFTNNNYNTSNKTSNLEKTKNNDFESLISSTKSTNETTTQKTEEKDIIVDKSSTQSLYEDIISLLRTGFTVGELKAFEERLKQILKMKEDKDSGKEISIKDIEAALKQLEMEILEAKKNRIGEVIKKASDDTASPSNSNLNSNFDTTLSNITNMLQEIKTSSKNTKQDFDNNKEYDRLRLLLKMS
>NZ_CP030944.1|WP_129094409.1|362411_363149_-|hypothetical-protein
MDKNNILISALNIENISQKELSDKSSVDLIKRDDFDKLISKLEVSFNEKEINKIFSIVEDRYISEKEILSLSYEEVKKLKELIMEEDENGNVYDASLIRSSYKVSSFMATSLISDNEDFNKAIFEKLKTLKDEKETVLFMAAITGSFAIQSVVAWDEKIDDEGKSFGFKKIKENNIEEYLKDKIKYFKDILDDGVSTLASKTYEKVLSWYEDILENYSSIKKEREYKIAQIIRNNKPNPLEILSL
>NZ_CP030944.1|WP_129094410.1|361912_362404_-|M48-family-metallopeptidase
MKYLNHYPKDLQDKIKVLIEKEKLSSYIKTKYPIAHNYTNDKTLYSYVMDFKNEYFKKYQVSKVMYDGKINVINNALGMHSIVSRVQGGKLKSKNEIRVATIFKNMPEEFLQMIVVHELAHFKEREHDKAFYNLCTFMMPSYHQVEFDLRVYLTHIDLYGKLY
>NZ_CP030944.1|WP_129094411.1|360727_361840_-|glycosyltransferase
MNKFLYVTDQNEHTDHSFIGPLFQKYLNKHFDINTIFFSKSKTVIEKKDNGTIIVPENLSINLLDELAINGINISEYSFVVVRNNINLLKEVLKRKDKYNYKVGFRLSFPKRIAKLQTDEANNKKTLFDIISNKIQTYTEINLINECDIFLPTSFQMKNDYFKDVKTRTFVIPSAIDPDNLHENIQHEKDEKRFFYAGTLDKLREFETVLKAFSNIKSTNYKLMISTKDPEYLETILDDFPKLKDNIEVYDAKTRQELLNLIAISDIGLAVLPNIALFNSSTPMKVLDYYSSAVPCIMSDNENNSSIFEDNISAWFCDFNENSIKEKLEYIINLSKDEVAQVGINGQKRLLAVRNYERIAADLAHQLNIL
>NZ_CP030944.1|WP_129094412.1|360118_360679_-|HPP-family-protein
MQKFFKQFKKINSEPLEKSNLIWSWIGSFLGILAISYFHSDILNDKDLTLLVGSFGASAVLVYGAVNSPLSQPRNLIGGHLISAIIGVICFKLFSFNLLFASAVAVSTSILMMQLTLTLHPPGGATALIAVIGSEQIHDLGFLYILFPVTTGAFILLIIALIINNIPKHRYYPESLKDFNKKWFEK
>NZ_CP030944.1|WP_129094413.1|359327_360116_+|class-I-SAM-dependent-methyltransferase
MRFEDIDFNKLYIEQKEASTFKQKSKEAWDIKADSMNKRVHKSIYNEQFLKLLNLEKIDTLLDIGCGVGNISLKLAPKLSKVYCLDYSTKMLELLNENAKKQNINNITTINKSWYDSWDDISNADLVIASRSMEVKNMKEALEKLNNKANKKVVISYKVGGSFVSDEILDVLQKDIIKKPDYIYVLNILYNMGINASLNFVQSEGRGTIYTSKEKFIESVSWSIGSLRSDEIKKLEDYYDNLDENKKFKEDFVSWAIISWDK
>NZ_CP030944.1|WP_129094414.1|357221_359327_+|DNA-helicase-RecQ
MNTKYQILKDIFGHDKFRSFQEEVVDCILNKQDILTILPTGGGKSLCYQLPTLLMSGTTVVISPLIALMQDQIKALNDLNISADMISSATSNDENSFTLQKLLNGELKFIYVAPERFTSNEFVSVLQRININYFVIDEAHCVSAWGHEFRAEYRNLDRLKRFFPNTAICAFTATATKKVEADIASSLNLQNPRHFRAKTIRNNLDIKVEPRIANGKTQILNFLKTHKGLCGIIYTFTRKEAESTAEFLSENGYSAKAYHAGLSSDKKDEVFNDFVYEKIDIVVATIAFGMGIDKSNIRFVIHTSLPKTLENYYQEIGRAGRDGEMSYVYMLYSKSDEVKRKLQIEEAIDNSYKQTALDKLEFMYRYCVSNNCRHKMIAGYFEDEIEACKTLCDNCTKGEVELIDVSVDAQKLLSAIYRTEQRFGLNHIIDILRGSKNQKILEFGHEKLNVYNLGVEKSKNEWIAIADKLIDIEALSLGEFRALKISSLGLEILKGKEKLFIDSDKLGIASKIQEEETELTFDELIYERFRTLRKEIALQSEIPAYVIFGDKTLKEFALKLPITKDEMLNINGVGLVKYEKYGEDFLNLSKEIKEEFKEKLEQKEPLKKLTKTYLETFELLNEGKSVEEIAQIRDLGLTSILGHISVLFEHEKISKEKKEELLKPLEISKEIRNWIEEGLKLDTLKELRQKLYLYEYLSKEL
>NZ_CP030944.1|WP_129094415.1|356021_357221_+|L,D-transpeptidase-family-protein
MFKNFLILLFILCNVSFVFASTKKYTISVCTTSNMQNALTCKKRVLKSMSGEVFIVKQNYNRYFTYLNLYDSYQEAKNEMKNLSSYVKKQKAYIKQIDYEEKEELKEKVIETVMVKEESIAEVKEEKIKPKEIIPLASSLPLLEDLKLVSSYRFEEENTQENIKEQIEDSVKIEQMEEPKDLIVSKEEIQYVEELRQISMDEFDKENEKQKQIIKPKEEKKPKITVSQNIQNNLESKKYDVSDYEQLIIEVDSSTNYMTIKAKVDDKLEKIKNYRVSTGKDSVKKPFGVGKVSQISLNPVWYPTQETKKTFKKRGINLPSVVPPGHKYNYMGAAKINLTHIVDGKSTYRIHGTLNEKTIGTNESAGCIRMKNSEVVELANLINQFSSMRSLSDVKVVLK
>NZ_CP030944.1|WP_129094416.1|354641_355862_-|MotA/TolQ/ExbB-proton-channel-family-protein
MFTDDDFIELNSKFYTTCKPLSRIFILLTVPAALFGIILLCYLSVLPLKVEMHSVILIGFIFFIYLFFVKHNAYFVSCKFKTQYYELAYDLKEYINKNLLTIGGTTKANGSVDDFLQDYTSNLRNTNFSSIASGIFPTLGILGTFISIAFSMPDFNSGNSADLEKEISTLLGGVGTAFYVSIYGIFLSIWWTFFEKIGMSRFEHDSFIIKEGTKHFFWTKVDIESIHIKSNLDNFTKMSEVFNQLTSSNILDNINSSIEQRFDVLEEILKKEFILSSKISENIDNNEKLSLMLKDMTLNMHTTIKSFEKQKDLYALNAELLNNNIEKLNSHMHNLSSDNLKAIYSNIVKSIETMKSDMEKLEWKFKKGIEEYDENITNKLKTSLEMIDEETTKILEDFKEFKEISK
>NZ_CP030944.1|WP_129094417.1|353603_354635_-|OmpA-family-protein
MYNKEQKNDENFWISYADLMAGLLFVFILVIGAIVIKYIYTQNTLEKEKAALNSSEEAKSKLFYELAKAKNLYETTKNELDKTSKDLKEKEEKLSLNLTEIEKLKSLLLEYELNIKDEKDKNEKLSTELLDKTNMISLKDEELTLLADKLLVQTQIHQKMVEEFDVAKLKIKNLTGIKLNVIAKLREKLGKSINVDEKSGAIKFSSNILFDQNEYKLKEESKKELSNTLKKYLTTLLGDKDIKKYIESITIEGHTNSDGTYLSNLALSQQRAHAVMQFLYESNIIDRKLLSTYVNSSGRSSSDLILDKNGVEDKDASRRIEIKFTIKNEEAMKELQNFLGEKK
>NZ_CP030944.1|WP_129094406.1|365802_368154_-|dynamin-family-protein
MSLANDYFLLYHGITFEQNLDVEPIDAIINDETFTIFALIISATRKNFDKYLPLTSFKTLCQQLKVKSPSNLNELNHLQHNIIETILQNKTKQNISIIHSSFEYLKTENIINNENFNKLISLFDYKELDIIEENTITLHEEIDEENKSSFKDLKATLEDIIEDLKADISNQEILNEIESCKNYLNNQKFSIGITGVMNAGKSTMLNALMGKEILGSAVVPETANLTIVKHNTTDTAKVYYWNTQEWDRIKKSAEQLESMKEFVNETNKIFGENLKNYIRPTSRFDEIDIKDLSSYTSAEASGKKCNLVKYVELGSKLDFLSDGIEIVDTPGLDDPVIQREEITKEYISACDMMLHLMNVSQSATLKDVEFIIDAVLYQNISKLLIVITRADTVTKEQLDEVIKYTKNSIEKQLRAQNKDSQLDYILKTIKFIPISGRMALLHRTGRAKEALDAGFTLEDTGILEIEKYLTETLFGSNSQKGELVIQSSKTQLQRIIEKQNSFYNYELKLLSKSKDELEKELEEFNKKKAVNTRIFQAMSEDITYYKNDAKSYIDSLETFLQSELIDLQTVIKQRVVSDVRYSFEKTKKRPENSRIKVIVETAIKDGIIDVIRDYRYKFIKKSQTIGEQCEQKYHDMGFTIGHKNENFDARGFFQDDFKSGFLTSNNEVLVSLITEAVSKSKESKINELDREIEEAIKNQFTSIEEDIKTKAKKVSTLLIESFFTTLNAPLKTFEQKLKSDEETLQNQINSFEETDKNRAQISIDIHKNIKKLENITTNIKGLY
>NZ_CP030944.1|WP_129094405.1|368251_368983_-|fumarate-reductase-iron-sulfur-subunit
MSTQKGREITISVLKFNPRSKVSKPHFVEYKLEETPGMTLFIALMKIRETMDADLSFDFVCRAGICGSCGMVVNGKPTLACRTLIANYPTGKLQLMPMPAFELIKDLSVNTGKWMDAMSKRVESWIHTNEEIDITKMEERVDPDVADQTFELDRCIECGICVASCGTALMRPNFVGPVGLNRVARFEVDPHDKRTAEDFYELIGDDDGIFGCMSLMACEDHCPKHLPLQNKIAYLRRKLVALR
>NZ_CP030944.1|WP_129094404.1|368982_370968_-|fumarate-reductase-flavoprotein-subunit
MKINYCDALVIGGGLAGLRAAVAAQKKGLSTTVLSLVPVKRSHSAAAQGGMQASLGNSKMSDGDNEDLHFADTVKGSDWGCDQVVARMFVHTAPKAIRELASWGVPWSRVKAGTREAVINAKKTTITEEQDRHGLITSRDFGGTKKWRTCYTADATGHTMLFGVANEALKHNVDIRDRKEALSLIHENGRCYGAVVRDLITGELEAYVAKGTCIATGGYGRVFKQTTNAVICEGTGAAIALETGIATLGNMEAVQFHPTPIVPSGILLTEGCRGDGGILRDVDGHRFMPDYEPEKKELASRDVVSRRMIEHIRNGKGVPSPYGYHVWLDISILGREHIERNLRDVQEICMIFNGIDPADEGKKGWAPVLPMQHYSMGGIRTKPTGESQNLNGLFACGEAACWDMHGFNRLGGNSVSETVVAGMIIGNYFADYCLANDVTIPTSTVQKFLDKQDAYLNEILAYNGNEDIFKIKNRMQNLMDEKVGIFRDGVNLKAAVDELEDLLKKTKQITVKSKERAGNPELEEAYRVPKMLKIALCVAKGALERTESRGAHYREDFLKRDDANWLNRTLTSWPDENQTIPTITYEPLDIMTMELPPAFRGYGAKGMIIEHPDSEKRQAVVDEVTEKMQAEGKDRHEIQHALMPFDLPMNYREKNERAGDL
>NZ_CP030944.1|WP_128985251.1|370967_371768_-|fumarate-reductase-cytochrome-b-subunit
MSDLIEGYLGKTVEGKKSRLPAKLDYMQSFTGGFLALFMWAHMLLVASILVSKDFMYTVTKLLEGSFIFEGGNPILVTIAAAVIFVVFIVHAALGMRKLPGNFKQYQVMKAHAKSMNHDDTKLWFIQAFTGFAMFFLGSVHLYIIMTNSADIGPYESADRIWSEWMWPLYILLLLAVEFHGTIGLYRLCVKWGWFDGENPKATRIALKKVKWALTVFFLVLGFASLAAYMKIGMENAKNGTVGQKYTPTAKVMEFNITNKSVGGIA
>NZ_CP030944.1|WP_129094403.1|371979_373500_-|NADH-quinone-oxidoreductase-subunit-N
MSQFFYLIPALSILIGALVLMFMSMYERFNVKNFIVVSSIFLIIALVFSLISINSLYSIQPFPHFLNNVLTFDTYSNFFNILLIAGTLLTLLIGEHYFQHREYFKGEFFSILLFALFGMMILAHSNELVTAYIALEIASFSVYIMVGYNTEDSKRVEAIFKYLVLGSFIGAFYLLGVVLVYGATGSTNLAAISSFIINANEENMALVYIGLTLILFTFLFKIAAFPFQSWVLDIYRGSPMIITAYMASTFKIAIFSFFLRAILDYIYPIIDFWDEIISIIIIFTLIFGTWLAITQQIVKRMLAASSIVHTGYLLLAFIALSYKDGELLNIDSAYAIMFYLIAYLLSALGAFGLASHIISDTNIKITYDDFKGLAKERPFLAAMMTIFLFSLAGIPSTIGFIGKFYVFTEAINAGYTALTIVAIVATIISVYYYFKLIAVMYFYSAKEEAISIEFNDRRVSTYAIAFVAILTVLGGIGSAIVFFIPVMNIDTIINLTQMAVQSLFIK
>NZ_CP030944.1|WP_129094402.1|373496_374984_-|NADH-quinone-oxidoreductase-subunit-M
MSSDILSFIIFLPAVVAFGLMLTTRDINTIRNIAFLTTTVILALVLKIYIEFEPSSGMQFVTNIPWIETYGINYYIGLDGFSLTILMMIAILIPSSYLLLWEGKTKGYWINMLLVQTGVTGTLLSLDVVLFYFFWEVMLLPVFLLIGLYGFGNKVFTTIKVTVYTMAGSLLMFIAILYLGVSYNNEFGHWSFAYDKLMTISTLDHNAKIWLFLAFLAAFAIKIPIFPLHTWIMETYKNAPTGAVFLLSSIMAKLGVYAIVRFMIPIFPDIYIEFSTWFVAVGLFGLIYFGIAALMQDDIKRMFAYSSASHLSFIAAGIFSLNSYGINGALYLIIAHAIATGALFLLVGLMQEQTGFKTIKDLGGIAKKAPIFTFIFAIMLFANVGLPGTNGFVSELLIIFGIYEFNKGLGYVAALTVIIGATYMLWMFQRAILQDRPEGSNELVMRDLKIKEIIGLIPWVILVFLMGFYPEVFINKFEPTVTHYLNDILQIGATK
>NZ_CP030944.1|WP_129094401.1|374985_376872_-|NADH-quinone-oxidoreductase-subunit-L
MNSSLLIWIILAPLLGAIFNGLLYFYHIKKHKVDDIYFALIGTITPFISFLITFSLFLRMNEENIIFKQHLFTWLNVDKLNIEMSLLGDNLSIFMSMFVTFVGWLIHIYAIGYMKGDNGFGKFFAYFNLFLASMLILVLADNPIILFIGWEGVGVCSYLLIKFHYGNAQNVLAANKAFIVNRVGDFGFLLGVVTLFFALAQVDLSFGTIEANIGNVSNELLIVSGFLLFVGAMGKSAQIPLYVWLPDAMAGPTPISALIHAATMVTAGVYMVARFHFLYSEIEEIGLFIAYIGAFSALLAAIIATRQTDIKKILAYSTMSQLGYMFIAVGLGFYSTGLFHVFTHAFFKAMLFMGAGGIIIALHHEQNIFKIAQHRASLPIIGTTFLIGVIAISGIPPFSGFFSKDAILAAAFQEKQYLIWAIAMFTAFLTAYYMFRMYFIVFVAPNHHNEEYVYTSKTITIPLLILAVGAIGAGFLNLPAIFGGSHFVDTWLSQLNSKQIHMDHTTEYVLMALSIIVAATGIMAAYSKYANFDLSKPENETGFIGNKFYIDEIYDSIFVQPTKALSVFIDRILDNKIIDALIMNSSNAFVNIGKKVAMIQNANVRFYAAFMLVGMTCIFVYLYIKLGL
>NZ_CP030944.1|WP_129094400.1|376868_377183_-|NADH-quinone-oxidoreductase-subunit-NuoK
MLTLTSYAFVSMILFSIGVVGVIARKNIFVIYMSIELMLNGVNLFLVTFARYHFNLDPQIITIMVISIAAAEAAIFLSVIILLYRSKKSLNTDIFTTLTQGEKS
>NZ_CP030944.1|WP_129094399.1|377185_377707_-|NADH-quinone-oxidoreductase-subunit-J
MADLIFIALAIFAIGGAITMVISSNPMHSALGILITMLSVAGMFALLNAIFLFLVQIIVYAGAIMTLILFILMFLNIKEEDLPKEPNKYKLIAITAVIMIPLNVLVLKAVSNLPHKDLSIVDTGFGDIKPVGLELYNNWIISFELISILLLIALIGSVVLAKKRKSKLNSKEN
>NZ_CP030944.1|WP_129094398.1|377699_378206_-|NADH-quinone-oxidoreductase-subunit-I
MGIKVVPRYGKSFKDKLYLPAIAGGMKTTLKHFMKNLSNVNNLKTMQYPEVQPTDLNERYRGVHRLTKHDDGTEKCVACFMCATACPAECIFIEAEERFDEHDEKRPKEFKIDLLECVFCGYCVEACPCDAIRMDTGIFSFTASKREDFVLNKKALMANERSKDLNDG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP030944_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP030944_3

1866014-1866248

Orphan

Consensus_repeat	Method
ATCGAATTTTTTAATTTATCTAAAAAGATTTATTATCATTATTCAAGAAA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP030944_3

>merge|NZ_CP030944|3|1866014-1866248|PILER-CR
ATCGAATTTTTTAATTTATCTAAAAAGATTTATTATCATTATTCAAGAAATTTTTCACCAAATGTTTAGTGGATTTTTTCTCAATAATGATAATATAGCATAATAGATAAAATTATTTATATCTAATAAGATTTATAAATATTAATATTAAAATCATTTTTTCATTAAATGTAATGCTAAAATATATCGAATTTTTTAATTTATCTAAAAAGATTTATTATCATTATTCAAGAAA

>NZ_CP030944|3|1|1866014-1866248|PILER-CR
ATCGAATTTTTTAATTTATCTAAAAAGATTTATTATCATTATTCAAGAAA	TTTTTCACCAAATGTTTAGTGGATTTTTTCTCAATAATGATAATATAGCATAATAGATAAAATTATTTA
TATCTAATAAGATTTATAAATATTAATATTAAAATCATTTTTTCATTAAA	TGTAATGCTAAAATATATCGAATTTTTTAATTTATCTAAAAAGATTTAT
TATCATTATTCAAGAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP030944.1\|WP_129096115.1\|1856292_1857411_-\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NZ_CP030944.1\|WP_164967078.1\|1857413_1858307_-\|polyphosphate-kinase-2	unknown	unknown	gnl\|CDD\|213852
NZ_CP030944.1\|WP_129094302.1\|1864877_1865435_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094295.1\|1869323_1869641_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094297.1\|1867642_1867927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094296.1\|1868091_1869261_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094292.1\|1870461_1872141_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379114
NZ_CP030944.1\|WP_129096120.1\|1861626_1862859_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP030944.1\|WP_129094301.1\|1865448_1865808_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094300.1\|1866450_1866756_+\|DUF2958-domain-containing-protein	unknown	unknown	gnl\|CDD\|371405
NZ_CP030944.1\|WP_129094299.1\|1866752_1867283_+\|DUF4375-domain-containing-protein	unknown	unknown	gnl\|CDD\|379547
NZ_CP030944.1\|WP_129096119.1\|1859701_1860895_-\|saccharopine-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|224662
NZ_CP030944.1\|WP_129096118.1\|1859511_1859676_-\|rubredoxin	unknown	unknown	gnl\|CDD\|238372
NZ_CP030944.1\|WP_129094298.1\|1867448_1867646_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_164967020.1\|1867279_1867447_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129094294.1\|1869715_1869985_-\|type-II-toxin-antitoxin-system-YafQ-family-toxin	unknown	unknown	gnl\|CDD\|379750
NZ_CP030944.1\|WP_129094303.1\|1864176_1864878_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP030944.1\|WP_129096117.1\|1858373_1859522_-\|carboxynorspermidine-decarboxylase	unknown	unknown	gnl\|CDD\|143502
NZ_CP030944.1\|WP_129094293.1\|1869977_1870244_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_CP030944.1\|WP_129096121.1\|1862822_1863365_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271182

Protein	Function_ID	Function_description	E-value
NZ_CP030944.1\|WP_129096115.1\|1856292_1857411_-\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	2.34834e-119
NZ_CP030944.1\|WP_164967078.1\|1857413_1858307_-\|polyphosphate-kinase-2	gnl\|CDD\|213852	TIGR03707, PPK2_P_aer, polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1). [Central intermediary metabolism, Phosphorus compounds].	8.91034e-146
NZ_CP030944.1\|WP_129094292.1\|1870461_1872141_+\|AAA-family-ATPase	gnl\|CDD\|379114	pfam13304, AAA_21, AAA domain, putative AbiEii toxin, Type IV TA system. Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system.	1.52154e-10
NZ_CP030944.1\|WP_129094293.1\|1869977_1870244_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	1.85905e-16
NZ_CP030944.1\|WP_129096120.1\|1861626_1862859_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	3.77021e-70
NZ_CP030944.1\|WP_129094300.1\|1866450_1866756_+\|DUF2958-domain-containing-protein	gnl\|CDD\|371405	pfam11171, DUF2958, Protein of unknown function (DUF2958). Some members are annotated as lipoproteins however this cannot be confirmed. This family of proteins has no known function.	1.89911e-13
NZ_CP030944.1\|WP_129094299.1\|1866752_1867283_+\|DUF4375-domain-containing-protein	gnl\|CDD\|379547	pfam14300, DUF4375, Domain of unknown function (DUF4375). This family of proteins is found in bacteria. Proteins in this family are typically between 156 and 204 amino acids in length. There is a single completely conserved residue G that may be functionally important.	4.78973e-07
NZ_CP030944.1\|WP_129096119.1\|1859701_1860895_-\|saccharopine-dehydrogenase-family-protein	gnl\|CDD\|224662	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism].	2.77794e-152
NZ_CP030944.1\|WP_129096118.1\|1859511_1859676_-\|rubredoxin	gnl\|CDD\|238372	cd00730, rubredoxin, Rubredoxin; nonheme iron binding domains containing a [Fe(SCys)4] center. Rubredoxins are small nonheme iron proteins. The iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc. They are believed to be involved in electron transfer.	1.49073e-21
NZ_CP030944.1\|WP_129094294.1\|1869715_1869985_-\|type-II-toxin-antitoxin-system-YafQ-family-toxin	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	2.34799e-32
NZ_CP030944.1\|WP_129096117.1\|1858373_1859522_-\|carboxynorspermidine-decarboxylase	gnl\|CDD\|143502	cd06829, PLPDE_III_CANSDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Carboxynorspermidine Decarboxylase. Carboxynorspermidine decarboxylase (CANSDC) catalyzes the decarboxylation of carboxynorspermidine, the last step in the biosynthesis of norspermidine. It is homologous to eukaryotic ornithine decarboxylase (ODC) and diaminopimelate decarboxylase (DapDC), which are fold type III PLP-dependent enzymes that contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. Based on this similarity, CANSDC may require homodimer formation and the presence of the PLP cofactor for its catalytic activity.	0
NZ_CP030944.1\|WP_129096121.1\|1862822_1863365_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271182	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain. P4-like integrases are found in temperate bacteriophages, integrative plasmids, pathogenicity and symbiosis islands, and other mobile genetic elements. The P4 integrase mediates integrative and excisive site-specific recombination between two sites, called attachment sites, located on the phage genome and the bacterial chromosome. The phage attachment site is often found adjacent to the integrase gene, while the host attachment sites are typically situated near tRNA genes. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	1.02895e-31

>NZ_CP030944.1|WP_129094301.1|1865448_1865808_+|hypothetical-protein
MLSYNKYYLSDERHEYTEVANATFVLIFKQWEERNFRTKYIKSIYPSIFKNNEIPLACVKTKVSQLRRYKTTGDTFRISPKLIDLYESLKDVSIYKLESTIKQVLTGFNIRYSIFYDLI
>NZ_CP030944.1|WP_129094302.1|1864877_1865435_+|hypothetical-protein
MFDTKTYVTNVTIDTINNSIITINGEKFKIYLEKLNVKQKIPLTIILAFEPNSNDKVKYIEPYDNYNTGSKKYKRFIFIIACLYISKIVFESKNDKEKVEEAKHSMLSFFNADEINIFSPTIKEFKNFYKSENLTSVSKQVEDIFNTYFPFDNLILFKIIVFAFYHSFDFEIEIDISENFNLLNI
>NZ_CP030944.1|WP_129094303.1|1864176_1864878_+|hypothetical-protein
MENTKTEFPTIVDDAPIADCDWLPSYYNGINNNYRDESNGINSIGKIEFRAILDDNPIAERYVSPFSNLAIYDEKIAEENNKIFPYEIEDLERLYNIERFPNRIRREPRVLRKYNELANYVVVTAYLLFKEATIANKKPRLPYEAKPNPRPQLTKYAELAHEIIDAPMKSLKAKISQLDRWDYMENNPQVSFGLIKAFYDLANINPQILWNIIKNHNKLNALEEIKKLIKKDK
>NZ_CP030944.1|WP_129096121.1|1862822_1863365_+|tyrosine-type-recombinase/integrase
MVCKLVGQYKKINFFNNSDNLCNLKWSYIDFDKKILIIPRELMNVKNINLPDFKMPLTDEVINILKEQEIFSGHQEWIFLGNNNRDPINSETPNGALKRMGYNDERKGRKQRLYSFRGAFRSLIDTLDLENKFSFEIKEKALNHQEESKTVRAYTNQVDYVNRFIPLMNFWSDYLLSFKD
>NZ_CP030944.1|WP_129096120.1|1861626_1862859_+|tyrosine-type-recombinase/integrase
MPKSVTPLNDALLKNLKPQTKDYIKTDGNGLRILVKTSGTKLWEFEYTSPTLKKRRKTSFGNYPQTTLVMARNKRDENIKLIRSGIDPLEQKQIEHDTIKKQNEIKNNTFQKVALEWHDNYSTEVSLNYHYKLLRALELYIFPFIKNKPISEITRKDIITILQELKNKSLVETANRTLMILNKIYMYAVTLEYAPHNIIADIDKKVLLGKIEKVHYPTFTKIQDIKGLLLSIDEYQGEISTQFAIKLLPYVFVRSFNIRNMTWDEIDFQKKEWIIPANKMKTNKEFILPLPLQAIRILKNLKKRQTNDSKYVFVGIRSVNAPISDNTLISALRRMGYTKDQIVPHSFRSIFSTIAYENMPIHGFSSEVIEALLAHQETNKVKEAYNRATYKEQMKNLIQWYANWLDNIKK
>NZ_CP030944.1|WP_129096119.1|1859701_1860895_-|saccharopine-dehydrogenase-family-protein
MSKKGILIIGAGGVSRVATVKCAMNIDTFEHITLASRTVSKCESIAADILKNQGVKIDVASVDADSVDELVKLIEKVNPKLVLNVALPYQDLTIMDACTKCKVDYVDTANYEHPDEAKFEYKLQWERDGQFKEAGIMALLGSGFDPGVTGVFCAYAQQNLFDEIHYIDIMDCNAGDHGYKFATNFNPEINLREVSANGRYWENGQWIETTPLEIRVDHDYPEVGVKPSYLLYHEELESLSKNIKGLKRIRFFMTFGDAYIQHMNCLQNVGMLGIEPVEHKGMMITPIEFLTTLLPDPASLGPRTVGKTNIGCIIEGIKDGKPRKVYIYNVCDHQECYKETGAQAVSYTTGVPAMIGSKLLYKGIWKNTGVFNIEEFDAKPFMDELMTQGLPWKILEL
>NZ_CP030944.1|WP_129096118.1|1859511_1859676_-|rubredoxin
MQKYICTACDYIYDPAVGDPDSGIEAGTAFEDLPQDWSCPDCGVGKEDFEPYEE
>NZ_CP030944.1|WP_129096117.1|1858373_1859522_-|carboxynorspermidine-decarboxylase
MKNSYTTVDSFDKLPSPSFVCEEALLEKNLKLLKRVQDEADISILLALKGFAMHSTFDLCKKYLKGCCASGLHEAILAKEEFGGEVHTYSPAFKDEEIDEIISISNHLVFNSFSQLKRFKDKAFGKVSLGIRLNPEYSSVEVDLYNPCAPFSRMGTTKANFDESQLEFLDGFHFHALCEQNVDALEGALAAFEKNFSQYFDKLKWVNFGGGHHITRADYDVEALIKLLKDFKSRYPHLKVYMEPGEAVGWQTGYLVATVLDVIHNGMDLAILDTSAEAHMPDTLAMPYRAMIRNSGVAQEKAYTYRLGGNTCLSGDIIGDYSFDEPLKVGDKIILEDMIHYTMVKTTTFNGIKLPSIIIKKDENNYEIIKNFGYNDYKQRLS
>NZ_CP030944.1|WP_164967078.1|1857413_1858307_-|polyphosphate-kinase-2
MEAIDTKESVKHDYKNKERKREDLEEKEEDGIKKVQIWVKKDTLEYEKRLIKLQIELLKLQNYVKEKGLKVLMLFEGRDAAGKGGTIKRITEHLNPRGARVVALEKPSDLEKTQWYFQRYTQHLPSAGEMVFFDRSWYNRAGVEPVMGFCTTEEHHEFLREVPEFEKMLVKSGIILFKFYFSVSKKEQAKRFKKREVDPLKQYKLSPVDKESQNLWEKYTIAKFSMLMASNTDIAPWTIIKSDNKKKARLNCISHILLNIDYANKTKEDIFSYDEDIIISGTQEIEKMEHDNKFTRL
>NZ_CP030944.1|WP_129096115.1|1856292_1857411_-|polyphosphate-kinase-2
MNLNDFEKTSHSGLYISKDSHPKFGQKYIARFQYDRKRYVKVLGYTKRDNLSIKTAIELMQSFKDSVIPKVEEKITKQEDKLSTKDNETLIKLKEENDFLKSILGDYKNLNPQVLNEGIQKIYDLEALKKYQIELIKLQNWLEKENKRMIILFEGRDASGKGGAIRRITRYMNNKHYRVVALGKPTETQRNQWFLQRYIEHFPTGGEIVLFDRSWYNRAMVEPIFGFCTPEEHEIFMEDIVNFEQDLVRQGMILIKLYFSVSKEEQKRRFDRRIQDPLRQWKFSEVDMQAQDLWDEFSEKKYEMLRRTTSRSAPWHIVRSDNKHLARLEAMKIILNSVDYDGRNYSLDFDENEEINISVQRELLQMRKTKDY
>NZ_CP030944.1|WP_129094300.1|1866450_1866756_+|DUF2958-domain-containing-protein
MVLLPKEIEEKLPPLYATENIATKNKIVKIKFFTPDSNWSWYVVEYDKEEKIFFGYVKGHYPEWGYFCLAELENATGPLGLHIERDIHFKEQPFGKIKELQ
>NZ_CP030944.1|WP_129094299.1|1866752_1867283_+|DUF4375-domain-containing-protein
MSVTPSKKLIDKLLCMEVDDNDFHQATLDIMYDKWQNNHKKYSYKEILDWFEETYDSFAKFAVLIGKYNQQVCNGGHIQYFNNGYANGNGGCFNEHSSSIPLHKELIQLFKQTELKDEISLKALEILTKFEIEQEDDEILNCEYLQVLDKKYYEINEQFMDLINEYIKEKILGENR
>NZ_CP030944.1|WP_164967020.1|1867279_1867447_+|hypothetical-protein
MNNYNPKQAYFDRRNKTQRNNDRKRDNHQYSSSIGGCSCNYIVNSTSETKTKKEK
>NZ_CP030944.1|WP_129094298.1|1867448_1867646_+|hypothetical-protein
MKKFEEIDKTLQNQIIDICNDDPYGLNPEFLYINILHSTGSTETLSKVFEVPETLIIKIKEQGKK
>NZ_CP030944.1|WP_129094297.1|1867642_1867927_+|hypothetical-protein
MKTIKEVTNNTAILRFVEHNNKKFKLTYDNRNGTPLGFDYRFQAEILKDDVWKTIAGKNDIEFKEISYVSDKTRLLEDSKRFFSKMQEHISLMY
>NZ_CP030944.1|WP_129094296.1|1868091_1869261_+|hypothetical-protein
MKLLSILVLFITLSFADTNNPFKTKVNLIELEKTYQQYEQTDYKNFILGAEYYFGQGKEQNIKVAKDIFEKNDYDEFMIIYSNELKKLIDAEIIPTQNTGVDLIKNSLQIYKKTNSNDTYTINMLNQMINSWNQNTIKYSPDKKSKVIEYKADYLAISQYDGYNRPSFVEIESPYGKVSFKDFAFEPFDFAEEYLFLNNQKLLIHFGSDTASGTYILDLTNFEMNLIGYGSLSSVQTINSEKIINLVLKGYHDEGGAFWYGKSYDSNGIELKNQTLNNFINDFDKAHNTKNSDLLNIFYLNSISYYNSKNYSKENVLKDKKRLFKKYPNFNMKSKILGIQQETENDFTIIYRKDVIYGNNNKIFDSYLKVKIIGEKVFIKEENDIFESI
>NZ_CP030944.1|WP_129094295.1|1869323_1869641_-|hypothetical-protein
MLFATVHPYKFWLLYPYWWYFAYEKEYTFEQAEKEYLQYRRKLGGYFPFEESTSFLESFKAKKQEGDKLYLYRSPTRNWFRLAGVEKFILVRDGKTIASSRIYGN
>NZ_CP030944.1|WP_129094294.1|1869715_1869985_-|type-II-toxin-antitoxin-system-YafQ-family-toxin
MLDLSVHKIFTKDLKKAQLNPTNSAKLFLYISMLLNNEELPSEARDHYLTGEWKDTKEFHISGDLLVIYMINDNILQLLRIGTHSQLFK
>NZ_CP030944.1|WP_129094293.1|1869977_1870244_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MTATTNKVRTNVYLDATTKEKAQEIFKQYGLGLSEAFNIFLTQSVLERGIPFEIKIPNDETLEAIKDARANKNMTKVSLEDLKKDLGA
>NZ_CP030944.1|WP_129094292.1|1870461_1872141_+|AAA-family-ATPase
MKIYFCSDKIDVFDDNSIYLFQDHIYDRHSKPWDDYGYTIMFQAYIKKNDELKNLGFLRILTKEYTDTSKYFLEKAQKLNDEIYDISNILKPENTISIGFTIDYYHKLNKLFAKQSRDVLKSICDASYNYNKYQIYSKWNGFNVALMRGKSSDSLLVKGYKTALGEYSIPDEFNINLTSLNNIEDTDFYFNNVNELSKININVLVGNNGVGKTTILQEIIDIVSGVKDIKEKWPYFNKLITVAFSPFEKFYTKEQLIKELDNKNIEDQNIQIKNEKEKTRKRKRKLKTEYAYIGFRNEDNVFDLNFPKSNIILSIIKIFEYDLENSWWQEKNRLKILFDTLSLSITFDAIKFKKKNGDYLLLSKNNVTDFQKEEIDLKEEIKFCILKENKDEEITLSSGQMIYSYMLPAIISELEDESLIIIDEPELYLHPTIEVGLISMLNYLLDVTSSYAIVATHSSIIVREVNRRGIKVLRRSADKYTEVNNPSVETYGESIDIITGEIFDDFYTDKPYQKKITNYISKDFDKNIEKIKSEIGDDALAFAFSKKSTNKSLVFKEDV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP030944_3	3.2\|1866183\|49\|NZ_CP030944\|PILER-CR	1866183-1866231	49	NZ_CP030944.1	1865965-1866013	0	1.0

1. spacer 3.2|1866183|49|NZ_CP030944|PILER-CR matches to position: 1865965-1866013, mismatch: 0, identity: 1.0

aaatattaatattaaaatcattttttcattaaatgtaatgctaaaatat	CRISPR spacer
aaatattaatattaaaatcattttttcattaaatgtaatgctaaaatat	Protospacer
*************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

494836 : 503173

Indivirus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129094155.1\|494836_495370_-	peptidylprolyl isomerase	A0A1V0SCU1	Indivirus	2.6e-29	45.6
WP_129094156.1\|495515_495878_+	(2Fe-2S) ferredoxin domain-containing protein	NA	NA	NA	NA
WP_129094157.1\|495892_496276_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_129094158.1\|496268_496589_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_129094159.1\|496592_497453_+	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	2.4e-08	27.4
WP_129094160.1\|497594_497852_+	co-chaperone GroES	A0A221S4G8	uncultured_virus	2.0e-11	43.0
WP_129094161.1\|497901_499536_+	chaperonin GroEL	A0A240F779	uncultured_virus	3.5e-170	61.9
WP_164967016.1\|499704_500925_+	HD domain-containing protein	NA	NA	NA	NA
WP_129094163.1\|501135_502512_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	5.5e-23	30.3
WP_164967017.1\|502501_503173_-	response regulator	Q8QKV7	Ectocarpus_siliculosus_virus	6.0e-07	32.1

DBSCAN-SWA_2

940553 : 948932

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129094621.1\|940553_941681_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.0e-19	37.6
WP_129094622.1\|941705_942149_-	GatB/YqeY domain-containing protein	A0A292GL36	Xanthomonas_phage	5.9e-19	41.1
WP_129094623.1\|942194_944144_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	7.2e-37	26.1
WP_164967032.1\|944362_944746_+	PAS domain-containing protein	A0A1B0V854	Salmonella_phage	5.2e-24	42.7
WP_129094625.1\|944754_946998_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	9.6e-09	45.6
WP_129094626.1\|947171_948932_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.4e-23	41.0

DBSCAN-SWA_3

1394852 : 1468716

Campylobacter_phage(12.0%)

tail,tRNA,plate,head,integrase,transposase,holin,capsid

attL 1431609:1431625|attR 1463481:1463497

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129094574.1\|1394852_1396868_-\|tRNA	glycine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_164967029.1\|1396860_1397016_-	hypothetical protein	NA	NA	NA	NA
WP_129094575.1\|1397064_1397442_-	hypothetical protein	NA	NA	NA	NA
WP_128986174.1\|1397452_1397671_-	hypothetical protein	NA	NA	NA	NA
WP_129094576.1\|1397670_1398252_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_129094577.1\|1398251_1398827_-	GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.2e-37	42.9
WP_129094578.1\|1398886_1399861_+	porphobilinogen synthase	NA	NA	NA	NA
WP_129094579.1\|1399863_1401078_+	PAS domain S-box protein	A0A1B0V854	Salmonella_phage	1.8e-14	39.4
WP_129094580.1\|1401080_1401758_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.4e-18	29.0
WP_129094599.1\|1401734_1402412_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	NA	NA	NA
WP_129094581.1\|1402389_1402554_-	hypothetical protein	NA	NA	NA	NA
WP_129094582.1\|1402531_1404646_-	ribonucleoside triphosphate reductase	D9ZNH0	Clostridium_phage	3.3e-120	40.2
WP_129094583.1\|1404859_1405789_+	ornithine carbamoyltransferase	M1I6M4	Paramecium_bursaria_Chlorella_virus	1.4e-17	26.6
WP_129094584.1\|1405788_1407156_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_128986165.1\|1407168_1407372_-	PLDc N-terminal domain-containing protein	NA	NA	NA	NA
WP_129094585.1\|1407372_1408326_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_129094586.1\|1408332_1409469_-	DegT/DnrJ/EryC1/StrS aminotransferase family protein	A0A218MN59	uncultured_virus	3.8e-06	25.5
WP_129094587.1\|1409476_1410238_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	2.6e-27	32.4
WP_129094588.1\|1410259_1410472_-	hypothetical protein	NA	NA	NA	NA
WP_129094589.1\|1410474_1410705_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_129094590.1\|1410697_1410937_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_129094591.1\|1410938_1411694_-	DnaJ domain-containing protein	NA	NA	NA	NA
WP_129094592.1\|1411784_1412198_+	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA
WP_129094593.1\|1412197_1412926_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA
WP_129094594.1\|1412928_1413951_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_129094595.1\|1413964_1414708_+	3'-5' exonuclease	A0A1X9SH08	Bradyrhizobium_phage	5.6e-06	29.2
WP_129095018.1\|1415611_1416259_-	S24 family peptidase	NA	NA	NA	NA
WP_129095017.1\|1416322_1416985_+	DUF4145 domain-containing protein	NA	NA	NA	NA
WP_129095016.1\|1417012_1417588_-	hypothetical protein	NA	NA	NA	NA
WP_129095015.1\|1417675_1418458_-	DNA adenine methylase	A7YG95	Campylobacter_phage	2.9e-77	56.6
WP_129095014.1\|1418563_1419505_-\|tail	phage tail protein	D4HTW7	Vibrio_phage	1.0e-20	29.0
WP_129095013.1\|1419501_1419708_-	hypothetical protein	NA	NA	NA	NA
WP_129095012.1\|1419704_1420073_-\|tail	phage tail protein	NA	NA	NA	NA
WP_129095011.1\|1420072_1422088_-\|tail	phage tail tape measure protein	K4ICR4	Acidithiobacillus_phage	5.1e-86	37.8
WP_129095010.1\|1422233_1422527_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_129095009.1\|1422539_1423028_-\|tail	phage major tail tube protein	NA	NA	NA	NA
WP_129095008.1\|1423028_1424213_-\|tail	phage tail protein	NA	NA	NA	NA
WP_129095007.1\|1424240_1424486_-	hypothetical protein	NA	NA	NA	NA
WP_129095006.1\|1424478_1425081_-	hypothetical protein	NA	NA	NA	NA
WP_171920689.1\|1425084_1426104_-\|tail	phage tail protein	A7YGK4	Campylobacter_phage	2.0e-30	46.3
WP_129095005.1\|1426100_1426745_-\|tail	phage tail protein I	A7YG82	Campylobacter_phage	2.1e-09	39.5
WP_129095004.1\|1426716_1427892_-\|plate	baseplate J/gp47 family protein	A0A088FQL4	Escherichia_phage	2.3e-09	23.2
WP_129095003.1\|1427899_1428205_-\|plate	baseplate assembly protein	NA	NA	NA	NA
WP_129095002.1\|1428204_1428936_-\|plate	phage baseplate assembly protein V	A0A2H4JFJ8	uncultured_Caudovirales_phage	2.1e-05	29.7
WP_046996170.1\|1428932_1429250_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_129095001.1\|1429347_1429575_-	hypothetical protein	NA	NA	NA	NA
WP_129095000.1\|1429567_1429894_-	hypothetical protein	NA	NA	NA	NA
WP_129094999.1\|1430069_1430510_+	DUF1834 family protein	NA	NA	NA	NA
WP_129094998.1\|1430502_1431303_+	hypothetical protein	NA	NA	NA	NA
WP_046996173.1\|1431299_1431635_+	hypothetical protein	NA	NA	NA	NA
1431609:1431625	attL	NA	NA	NA	NA
WP_129094997.1\|1431643_1432621_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_004509476.1\|1432750_1433152_+	DUF1320 family protein	NA	NA	NA	NA
WP_129094996.1\|1433151_1433658_+	DUF1804 family protein	NA	NA	NA	NA
WP_129094995.1\|1433644_1435375_+	hypothetical protein	Q6TM76	Pseudomonas_phage	1.0e-71	45.0
WP_129094994.1\|1435375_1436767_+	DUF935 family protein	M4M9P3	Vibrio_phage	1.1e-10	22.1
WP_164967037.1\|1436759_1437935_+\|head	phage head morphogenesis protein	Q6QIB9	Burkholderia_phage	5.3e-35	42.2
WP_129094992.1\|1438034_1438532_+	phage virion morphogenesis protein	NA	NA	NA	NA
WP_129094991.1\|1438523_1438799_-	hypothetical protein	NA	NA	NA	NA
WP_129094990.1\|1438941_1439319_-	DUF1018 domain-containing protein	NA	NA	NA	NA
WP_129094989.1\|1439413_1440322_-	helicase DnaB	NA	NA	NA	NA
WP_129094988.1\|1440314_1440626_-	hypothetical protein	NA	NA	NA	NA
WP_129094987.1\|1440606_1440819_-	DUF3496 domain-containing protein	NA	NA	NA	NA
WP_129094986.1\|1440988_1441309_-	hypothetical protein	NA	NA	NA	NA
WP_164967036.1\|1441308_1441485_-	hypothetical protein	NA	NA	NA	NA
WP_171920690.1\|1441594_1442161_-	N-acetylmuramoyl-L-alanine amidase	A0A2I7RHK5	Vibrio_phage	6.3e-34	45.1
WP_129094984.1\|1442160_1443003_-	DUF3164 family protein	NA	NA	NA	NA
WP_129094983.1\|1443064_1443313_-	hypothetical protein	NA	NA	NA	NA
WP_129094982.1\|1443428_1443656_-	hypothetical protein	NA	NA	NA	NA
WP_129094981.1\|1443643_1444282_-	hypothetical protein	NA	NA	NA	NA
WP_129094980.1\|1444259_1444970_-	AAA family ATPase	R9U430	Rhizobium_phage	3.6e-10	27.6
WP_129094979.1\|1445033_1447142_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	M4T586	Rhodobacter_phage	7.6e-32	29.4
WP_129094978.1\|1447143_1447377_-	hypothetical protein	NA	NA	NA	NA
WP_129094977.1\|1447380_1447569_-	hypothetical protein	NA	NA	NA	NA
WP_129094976.1\|1447720_1447927_+	hypothetical protein	NA	NA	NA	NA
WP_129094975.1\|1447917_1448124_-	hypothetical protein	NA	NA	NA	NA
WP_129094974.1\|1448508_1449165_+	LexA family transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.5e-15	31.3
WP_129094973.1\|1449186_1450140_+	hypothetical protein	NA	NA	NA	NA
WP_129094972.1\|1450661_1452755_-	5-histidylcysteine sulfoxide synthase	NA	NA	NA	NA
WP_129094971.1\|1452777_1455000_-	hypothetical protein	NA	NA	NA	NA
WP_129094970.1\|1454986_1455562_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA
WP_129094969.1\|1455564_1456044_-	ribonuclease E activity regulator RraA	NA	NA	NA	NA
WP_129094968.1\|1456179_1457163_+	hypothetical protein	NA	NA	NA	NA
WP_129094967.1\|1457255_1458554_+	(Fe-S)-binding protein	NA	NA	NA	NA
WP_129094966.1\|1458557_1459370_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_129094965.1\|1459370_1459643_-	DUF2116 family Zn-ribbon domain-containing protein	NA	NA	NA	NA
WP_129094964.1\|1459642_1459837_-	hypothetical protein	NA	NA	NA	NA
WP_129094963.1\|1459875_1460580_-	response regulator transcription factor	NA	NA	NA	NA
WP_129094962.1\|1460674_1463359_-	DNA polymerase I	A0A142F1Q9	Bacillus_phage	2.3e-65	29.9
WP_129094961.1\|1463444_1464170_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
1463481:1463497	attR	NA	NA	NA	NA
WP_129094960.1\|1464265_1466248_+	bifunctional diguanylate cyclase/phosphodiesterase	NA	NA	NA	NA
WP_129094959.1\|1466240_1467566_+	diguanylate cyclase	G3MA91	Bacillus_virus	3.0e-18	36.6
WP_129094958.1\|1467584_1468307_-	LPS export ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-25	30.4
WP_129094957.1\|1468299_1468716_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	NA	NA	NA	NA

DBSCAN-SWA_4

2201523 : 2208456

Campylobacter_virus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129094728.1\|2201523_2202195_+	7-cyano-7-deazaguanine synthase QueC	M1PKZ7	Cellulophaga_phage	4.4e-26	36.4
WP_129094727.1\|2202194_2202728_+	6-carboxytetrahydropterin synthase	H6SU72	Campylobacter_virus	1.2e-45	51.1
WP_129094726.1\|2202720_2203485_+	7-carboxy-7-deazaguanine synthase QueE	D5GV09	Campylobacter_virus	1.1e-49	42.9
WP_129094725.1\|2203554_2204298_+	3-oxoacyl-ACP reductase FabG	A0A0N9R355	Chrysochromulina_ericina_virus	6.8e-12	27.0
WP_004510944.1\|2204391_2204622_+	acyl carrier protein	M4QDG5	Prochlorococcus_phage	5.4e-08	66.0
WP_129094724.1\|2204733_2205993_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_129094723.1\|2206045_2206978_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_129094722.1\|2206986_2207331_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA
WP_129094721.1\|2207463_2208456_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2I2L4E3	Orpheovirus	1.9e-33	35.7

DBSCAN-SWA_5

2242221 : 2252628

Staphylococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129094688.1\|2242221_2244276_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.0e-105	37.6
WP_128986456.1\|2244392_2245289_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_129094687.1\|2245311_2246274_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.0e-12	30.1
WP_129094686.1\|2246273_2247623_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.5e-54	34.5
WP_129094685.1\|2247635_2248409_-	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_129094684.1\|2248423_2249353_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-61	43.9
WP_129012437.1\|2249566_2249884_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	5.5e-19	42.2
WP_129094683.1\|2250072_2252628_+\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	6.7e-75	35.4

DBSCAN-SWA_6

2473138 : 2481208

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_129095532.1\|2473138_2474365_-	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.4e-06	31.6
WP_129095531.1\|2474460_2474775_-	cupin	NA	NA	NA	NA
WP_129095530.1\|2474986_2476255_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	2.9e-10	24.7
WP_129095529.1\|2476259_2476673_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_129095528.1\|2476801_2477734_+	cysteine synthase A	A0A1X9I5K7	Streptococcus_phage	7.3e-80	52.4
WP_129095527.1\|2477765_2477996_+	DUF2061 domain-containing protein	A0A1B0XTK5	Freshwater_phage	3.5e-07	40.3
WP_129095526.1\|2478004_2478706_+	phosphoadenylyl-sulfate reductase	M4W6M9	Bacillus_phage	3.3e-08	34.1
WP_129095525.1\|2478834_2479749_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_129095524.1\|2479750_2481208_+	sulfate adenylyltransferase subunit CysN	A0A1V0SGC3	Hokovirus	3.1e-32	26.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP030944

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection