CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP053975	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed6, complete sequence	0 crisprs	NA	0	0	0
NZ_CP053971	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed3, complete sequence	0 crisprs	cas4,RT	0	0	2
NZ_CP053976	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed7	0 crisprs	NA	0	0	0
NZ_CP053969	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP053973	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed4, complete sequence	0 crisprs	csa3	0	0	1
NZ_CP053974	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed5, complete sequence	0 crisprs	NA	0	0	1
NZ_CP053972	Bacillus thuringiensis strain FDAARGOS_796 chromosome, complete genome	3 crisprs	WYL,csa3,DEDDh,cas14k,cas3,c2c9_V-U4,cas14j,DinG	0	3	10
NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	2 crisprs	NA	3	10	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26405 : 74557

Streptococcus_phage(50.0%)

transposase,bacteriocin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014895385.1\|26405_26564_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.7e-05	55.6
WP_012211087.1\|26586_27294_-\|transposase	IS6-like element IS240A family transposase	A0A1X9I6E7	Streptococcus_phage	1.9e-40	45.6
WP_012211086.1\|27861_28569_-\|transposase	IS6-like element IS240A family transposase	A0A1X9I6E7	Streptococcus_phage	4.3e-40	46.1
WP_000004357.1\|31456_32002_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001078053.1\|32383_32698_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000926085.1\|32718_34173_+	cell division protein FtsZ	NA	NA	NA	NA
WP_057096667.1\|34631_34859_+	hypothetical protein	NA	NA	NA	NA
WP_012211087.1\|34761_35469_+\|transposase	IS6-like element IS240A family transposase	A0A1X9I6E7	Streptococcus_phage	1.9e-40	45.6
WP_000269095.1\|36516_37932_+	metallophosphoesterase	NA	NA	NA	NA
WP_012211126.1\|38001_38709_-\|transposase	IS6-like element IS240A family transposase	A0A1X9I6C6	Streptococcus_phage	6.7e-41	45.0
WP_000232218.1\|39034_39472_+	hypothetical protein	NA	NA	NA	NA
WP_001123509.1\|39731_40037_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000648298.1\|40161_40443_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A1B1P791	Bacillus_phage	4.8e-11	32.1
WP_000448533.1\|40464_40698_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_000283265.1\|40949_41141_+	hypothetical protein	NA	NA	NA	NA
WP_000053706.1\|41271_41865_-	cell division protein FtsN	NA	NA	NA	NA
WP_003310239.1\|42436_43120_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	1.0e-14	36.2
WP_042993026.1\|43679_44321_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.7e-12	27.2
WP_000755554.1\|44337_44871_-	stage II sporulation protein M	NA	NA	NA	NA
WP_000678886.1\|44896_46564_-	hypothetical protein	NA	NA	NA	NA
WP_000461691.1\|46654_46876_-\|bacteriocin	circular bacteriocin, circularin A/uberolysin family	NA	NA	NA	NA
WP_012211123.1\|47291_48485_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_000631611.1\|48481_49162_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	6.2e-36	40.2
WP_000054352.1\|49158_50358_+	ABC transporter permease	NA	NA	NA	NA
WP_000387959.1\|50466_51165_+	DUF1282 family protein	NA	NA	NA	NA
WP_002164839.1\|51455_51752_-	hypothetical protein	NA	NA	NA	NA
WP_001106704.1\|52127_52313_+	hypothetical protein	NA	NA	NA	NA
WP_000070735.1\|52632_53544_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_000576480.1\|54150_54507_-	hypothetical protein	NA	NA	NA	NA
WP_000581812.1\|55034_55247_-	hypothetical protein	NA	NA	NA	NA
WP_000335715.1\|57212_57473_+	SEC-C domain-containing protein	NA	NA	NA	NA
WP_000494382.1\|58297_58705_+	DUF3221 domain-containing protein	NA	NA	NA	NA
WP_001042062.1\|59426_59738_+	zinc-finger domain-containing protein	A0A1C8E9C1	Bacillus_phage	1.3e-09	32.7
WP_001202920.1\|59912_60326_+	hypothetical protein	NA	NA	NA	NA
WP_014895392.1\|60683_60944_+	hypothetical protein	NA	NA	NA	NA
WP_012211115.1\|60846_61554_+\|transposase	IS6-like element IS240A family transposase	A0A1X9I6E7	Streptococcus_phage	1.9e-40	46.6
WP_012211114.1\|62300_65843_+	pesticidal crystal protein cry4Aa	NA	NA	NA	NA
WP_001070502.1\|68896_70924_+	hypothetical protein	NA	NA	NA	NA
WP_012211101.1\|70990_72460_+	hypothetical protein	NA	NA	NA	NA
WP_012211087.1\|73849_74557_+\|transposase	IS6-like element IS240A family transposase	A0A1X9I6E7	Streptococcus_phage	1.9e-40	45.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP053971

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

76250 : 111964

Bacillus_phage(60.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000107146.1\|76250_77483_-	WXG100 family type VII secretion target	A0A2H4J389	uncultured_Caudovirales_phage	2.1e-66	58.4
WP_000130747.1\|77602_78364_-	nucleotidyltransferase domain-containing protein	X2JMW4	Bacillus_phage	7.3e-86	62.2
WP_000337749.1\|78360_78615_-	hypothetical protein	NA	NA	NA	NA
WP_000138198.1\|78616_78907_-	hypothetical protein	A0A0S2SXU6	Bacillus_phage	1.5e-23	60.2
WP_000386879.1\|78899_79205_-	hypothetical protein	NA	NA	NA	NA
WP_000450054.1\|79223_79376_-	hypothetical protein	NA	NA	NA	NA
WP_014895379.1\|79470_79653_-	hypothetical protein	NA	NA	NA	NA
WP_000404326.1\|79652_79904_-	thioredoxin family protein	NA	NA	NA	NA
WP_000626116.1\|79936_80965_-	class 1b ribonucleoside-diphosphate reductase subunit beta	G3MBF3	Bacillus_virus	5.4e-108	59.6
WP_000019971.1\|80983_83068_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	G3MBF2	Bacillus_virus	2.3e-267	64.6
WP_000634706.1\|83049_83412_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	1.7e-29	51.3
WP_001235407.1\|83596_84694_+	tyrosine recombinase XerS	A0A166YH27	Gordonia_phage	2.0e-07	30.8
WP_000469986.1\|84732_85011_-	hypothetical protein	NA	NA	NA	NA
WP_000393454.1\|85028_85415_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000013355.1\|85743_86382_-	sigma-70 region 4 domain-containing protein	Q0SPI3	Clostridium_phage	9.3e-10	35.9
WP_000394584.1\|86511_87408_-	S8 family peptidase	A0A127AWU5	Bacillus_phage	1.1e-61	46.6
WP_000145790.1\|87641_88826_-	NupC family nucleoside transporter	NA	NA	NA	NA
WP_000260123.1\|88911_89433_-	hypothetical protein	G3MBS8	Bacillus_virus	3.0e-14	33.8
WP_000886924.1\|89642_90368_-	NAD-dependent protein deacylase	A0A068EPD4	Bacillus_phage	1.7e-31	32.5
WP_003310334.1\|90387_91458_-	phosphoesterase	NA	NA	NA	NA
WP_000429546.1\|91477_92227_-	hypothetical protein	S5MAL1	Bacillus_phage	1.6e-40	42.0
WP_001207091.1\|92360_92588_-	hypothetical protein	NA	NA	NA	NA
WP_000290289.1\|92592_93195_-	TerD family protein	A0A2I7QY15	Vibrio_phage	7.4e-25	40.6
WP_000996769.1\|93246_93897_-	TerD family protein	S5M8H7	Bacillus_phage	1.4e-29	38.2
WP_001008937.1\|93912_94122_-	hypothetical protein	NA	NA	NA	NA
WP_003254066.1\|94118_94580_-	hypothetical protein	A0A1I9S5V4	Bacillus_phage	3.4e-54	67.1
WP_014895378.1\|94710_95592_-	nucleotide excision repair endonuclease	A0A218KC00	Bacillus_phage	9.9e-18	41.7
WP_000220506.1\|95699_97235_-	nicotinate phosphoribosyltransferase	A0A218KC49	Bacillus_phage	4.0e-192	67.8
WP_000593824.1\|97261_98227_-	hypothetical protein	A0A173GBG1	Bacillus_phage	6.9e-57	46.1
WP_000209660.1\|98281_98716_-	GatB/YqeY domain-containing protein	NA	NA	NA	NA
WP_000427813.1\|98737_99175_-	hypothetical protein	A7KV30	Bacillus_phage	2.3e-23	39.4
WP_000733263.1\|99177_99426_-	hypothetical protein	NA	NA	NA	NA
WP_003310329.1\|99443_100649_-	AAA family ATPase	A7KUV6	Bacillus_phage	1.9e-67	44.7
WP_000499887.1\|100675_101791_-	hypothetical protein	A7XX66	Thermus_virus	9.3e-13	28.9
WP_001064689.1\|101765_102488_-	hypothetical protein	A7KUV4	Bacillus_phage	9.9e-16	33.3
WP_000386129.1\|102608_103049_-	hypothetical protein	NA	NA	NA	NA
WP_000568325.1\|103385_103640_+	hypothetical protein	NA	NA	NA	NA
WP_000161131.1\|103884_104688_+	PD-(D/E)XK nuclease family protein	NA	NA	NA	NA
WP_000186693.1\|104713_105139_+	hypothetical protein	NA	NA	NA	NA
WP_001053438.1\|105177_105369_-	hypothetical protein	NA	NA	NA	NA
WP_000687311.1\|105479_106307_-	metallophosphoesterase	O64184	Bacillus_phage	4.2e-119	66.9
WP_000342987.1\|106329_106539_-	hypothetical protein	NA	NA	NA	NA
WP_001284343.1\|106589_107018_-	nucleoside 2-deoxyribosyltransferase	A0A2P0ZL88	Lactobacillus_phage	3.1e-17	38.1
WP_000483063.1\|107079_107367_-	hypothetical protein	NA	NA	NA	NA
WP_000504037.1\|107477_107669_-	hypothetical protein	NA	NA	NA	NA
WP_001208820.1\|107709_108144_-	hypothetical protein	A0A127AXQ6	Bacillus_phage	1.1e-17	46.2
WP_000500661.1\|108486_108741_-	hypothetical protein	A0A076G7F3	Bacillus_phage	2.1e-29	67.5
WP_000642957.1\|108740_108974_-	hypothetical protein	NA	NA	NA	NA
WP_000477626.1\|108948_109272_-	hypothetical protein	A0A1I9S626	Bacillus_phage	1.7e-20	61.9
WP_001146641.1\|109284_109920_-	hypothetical protein	NA	NA	NA	NA
WP_003254025.1\|109945_110218_-	hypothetical protein	NA	NA	NA	NA
WP_003310322.1\|110223_110367_-	hypothetical protein	NA	NA	NA	NA
WP_003254024.1\|110461_111073_-	hypothetical protein	NA	NA	NA	NA
WP_000180796.1\|111148_111964_-	phage repressor protein/antirepressor Ant	A0A2D1GQG9	Lysinibacillus_phage	2.0e-20	58.1

DBSCAN-SWA_2

129941 : 140918

Bacillus_phage(55.56%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000548555.1\|129941_130691_-	hypothetical protein	A7KV01	Bacillus_phage	1.6e-16	40.7
WP_000156298.1\|130683_130962_-	hypothetical protein	NA	NA	NA	NA
WP_001068334.1\|130986_131466_-	hypothetical protein	NA	NA	NA	NA
WP_000583728.1\|131469_132084_-	dTMP kinase	A0A1V0QGB5	Shearwaterpox_virus	6.0e-14	29.9
WP_001023489.1\|132080_132563_-	dUTP diphosphatase	Q332E8	Clostridium_botulinum_C_phage	2.4e-26	43.0
WP_000881565.1\|132593_134555_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	9.6e-106	36.4
WP_003254307.1\|134704_134902_-	hypothetical protein	NA	NA	NA	NA
WP_000487831.1\|135031_135922_-	DUF1071 domain-containing protein	A0A1B1P7F0	Bacillus_phage	1.8e-30	48.1
WP_000945823.1\|136015_136225_-	hypothetical protein	NA	NA	NA	NA
WP_000624473.1\|136227_136746_-	dihydrofolate reductase	A0A0E3D9G3	Bacillus_phage	1.5e-21	40.4
WP_001173852.1\|136742_137603_-	thymidylate synthase	A0A0H3V0R8	Geobacillus_virus	1.3e-75	47.7
WP_131202515.1\|137671_138046_-	hypothetical protein	NA	NA	NA	NA
WP_000691718.1\|138110_139190_-	ATP-binding protein	A0A0E3D9S6	Bacillus_phage	2.9e-160	77.4
WP_001031181.1\|139301_140918_-	hypothetical protein	A0A0K2FMB2	Brevibacillus_phage	1.4e-131	41.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP053974

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

37 : 11017

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000159134.1\|37_952_-	hypothetical protein	A0A161JRA8	Bacillus_phage	9.9e-146	100.0
WP_000819106.1\|964_1477_-	hypothetical protein	A0A160LKQ7	Bacillus_phage	1.3e-91	100.0
WP_001162469.1\|1424_2177_-	glucosaminidase domain-containing protein	A0A160LKR7	Bacillus_phage	3.4e-136	100.0
WP_001113796.1\|2176_2791_-	hypothetical protein	A0A160LKP5	Bacillus_phage	7.7e-78	100.0
WP_000384937.1\|2794_3070_-	hypothetical protein	A0A169E435	Bacillus_phage	1.7e-48	100.0
WP_000169698.1\|3081_3228_-	hypothetical protein	Q5ILA8	Bacillus_phage	2.8e-18	100.0
WP_000657808.1\|3224_3401_-	hypothetical protein	Q5ILA9	Bacillus_phage	3.8e-22	100.0
WP_001057983.1\|3397_3829_-	hypothetical protein	A0A160LKQ5	Bacillus_phage	6.4e-55	100.0
WP_000339993.1\|3908_4115_-	hypothetical protein	A0A160LKQ4	Bacillus_phage	2.5e-12	100.0
WP_000523935.1\|4118_4349_-	hypothetical protein	A0A160LLA6	Bacillus_phage	7.2e-37	100.0
WP_000068587.1\|4390_5461_-	hypothetical protein	A0A160LKS4	Bacillus_phage	2.7e-203	100.0
WP_000558559.1\|5460_5715_-	hypothetical protein	A0A160LKS3	Bacillus_phage	1.9e-38	100.0
WP_000517094.1\|5716_5857_-	hypothetical protein	Q7WSF4	Bacillus_phage	9.1e-19	100.0
WP_000398580.1\|5873_6014_-	hypothetical protein	Q5ILB8	Bacillus_phage	1.5e-16	100.0
WP_001013356.1\|6028_6667_-	hypothetical protein	A0A161J814	Bacillus_phage	3.0e-125	100.0
WP_014905374.1\|6647_6956_-	hypothetical protein	A0A160LKS9	Bacillus_phage	5.8e-58	100.0
WP_003257741.1\|7012_7597_-	hypothetical protein	A0A160LKS6	Bacillus_phage	5.3e-76	100.0
WP_003310637.1\|7584_8022_-	hypothetical protein	A0A160LKS8	Bacillus_phage	1.4e-25	100.0
WP_000339646.1\|8034_8208_-	hypothetical protein	Q7WSG0	Bacillus_phage	1.7e-22	100.0
WP_172870317.1\|8441_8579_-	hypothetical protein	Q7WSG2	Bacillus_phage	2.4e-08	79.5
WP_000957403.1\|8596_8797_-	LexA repressor	A0A161ISH4	Bacillus_phage	1.9e-30	100.0
WP_014905375.1\|8812_11017_-	hypothetical protein	A0A160LKS5	Bacillus_phage	0.0e+00	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

4. NZ_CP053972

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053972_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053972_1

1890641-1890757

Orphan

Consensus_repeat	Method
CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053972_1

>merge|NZ_CP053972|1|1890641-1890757|CRISPRCasFinder
CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTTCGTTAACCTTTGAACTACATGAGTTTCTTTCTACCGAACATACAGCTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT

>NZ_CP053972|1|1|1890641-1890757|CRISPRCasFinder
CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT	CGTTAACCTTTGAACTACATGAGTTTCTTTCTACCGAACATACAG
CTTAAACAAGCGTTTGATTAATTCTCCATTTTTCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053972.1\|WP_003280640.1\|1888267_1888576_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP053972.1\|WP_000026896.1\|1889654_1890038_-\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_CP053972.1\|WP_000735090.1\|1884837_1885650_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP053972.1\|WP_000416287.1\|1895863_1897648_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173850
NZ_CP053972.1\|WP_000929162.1\|1882935_1883721_-\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_CP053972.1\|WP_001226751.1\|1883959_1884766_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_CP053972.1\|WP_000666176.1\|1892235_1893249_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|379113
NZ_CP053972.1\|WP_000601782.1\|1886331_1887357_-\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_CP053972.1\|WP_001180555.1\|1894729_1894915_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053972.1\|WP_000864824.1\|1895028_1895748_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP053972.1\|WP_001002987.1\|1894467_1894716_-\|spore-coat-protein	unknown	unknown	gnl\|CDD\|377935
NZ_CP053972.1\|WP_000359401.1\|1885673_1886339_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_CP053972.1\|WP_000713769.1\|1891528_1892176_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239481
NZ_CP053972.1\|WP_000640870.1\|1888579_1888924_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224572
NZ_CP053972.1\|WP_000826875.1\|1890856_1891384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053972.1\|WP_000218968.1\|1890079_1890445_-\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334
NZ_CP053972.1\|WP_001242142.1\|1887770_1888115_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053972.1\|WP_000486369.1\|1899230_1901612_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	unknown	unknown	gnl\|CDD\|224170
NZ_CP053972.1\|WP_106081637.1\|1893271_1894441_-\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|133427
NZ_CP053972.1\|WP_001206329.1\|1898036_1899209_-\|acetyl-CoA-C-acetyltransferase	unknown	unknown	gnl\|CDD\|181072

Protein	Function_ID	Function_description	E-value
NZ_CP053972.1\|WP_003280640.1\|1888267_1888576_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	4.18685e-18
NZ_CP053972.1\|WP_000026896.1\|1889654_1890038_-\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	6.96592e-70
NZ_CP053972.1\|WP_000713769.1\|1891528_1892176_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239481	cd03386, PAP2_Aur1_like, PAP2_like proteins, Aur1_like subfamily. Yeast Aur1p or Ipc1p is necessary for the addition of inositol phosphate to ceramide, an essential step in yeast sphingolipid synthesis, and is the target of several antifungal compounds such as aureobasidin.	8.02684e-16
NZ_CP053972.1\|WP_000416287.1\|1895863_1897648_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173850	cd01161, VLCAD, Very long chain acyl-CoA dehydrogenase. VLCAD is an acyl-CoA dehydrogenase (ACAD), which is found in the mitochondria of eukaryotes and in some bacteria. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. VLCAD acts as a homodimer.	0
NZ_CP053972.1\|WP_000929162.1\|1882935_1883721_-\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	5.15323e-150
NZ_CP053972.1\|WP_001226751.1\|1883959_1884766_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	5.121e-112
NZ_CP053972.1\|WP_000666176.1\|1892235_1893249_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|379113	pfam13303, PTS_EIIC_2, Phosphotransferase system, EIIC. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. The sugar-specific permease of the PTS consists of three domains (IIA, IIB and IIC). The IIC domain catalyzes the transfer of a phosphoryl group from IIB to the sugar substrate.	1.25572e-86
NZ_CP053972.1\|WP_000601782.1\|1886331_1887357_-\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	2.96413e-176
NZ_CP053972.1\|WP_000864824.1\|1895028_1895748_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	6.40912e-64
NZ_CP053972.1\|WP_001002987.1\|1894467_1894716_-\|spore-coat-protein	gnl\|CDD\|377935	pfam07875, Coat_F, Coat F domain. The Coat F proteins, which contribute to the Bacillales spore coat. It occurs multiple times in the genomes it is found in.	9.62029e-15
NZ_CP053972.1\|WP_000359401.1\|1885673_1886339_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.57648e-99
NZ_CP053972.1\|WP_000640870.1\|1888579_1888924_-\|hypothetical-protein	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	2.03274e-21
NZ_CP053972.1\|WP_000218968.1\|1890079_1890445_-\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	6.13259e-61
NZ_CP053972.1\|WP_000486369.1\|1899230_1901612_-\|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein	gnl\|CDD\|224170	COG1250, FadB, 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism].	5.25516e-83
NZ_CP053972.1\|WP_000735090.1\|1884837_1885650_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	6.69253e-111
NZ_CP053972.1\|WP_106081637.1\|1893271_1894441_-\|L-lactate-dehydrogenase	gnl\|CDD\|133427	cd05291, HicDH_like, L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.	0
NZ_CP053972.1\|WP_001206329.1\|1898036_1899209_-\|acetyl-CoA-C-acetyltransferase	gnl\|CDD\|181072	PRK07661, PRK07661, acetyl-CoA C-acetyltransferase.	0

>NZ_CP053972.1|WP_000218968.1|1890079_1890445_-|arsenate-reductase-family-protein
MTVTFYSYPKCGTCQKAKKWFEANDVAYEMIHIVENPPSKEDLRNLHEKSELPLKKFFNTSGMRYRELGLKDKLKDASEDEMYELLASDGMLIKRPIVTDGTNVTLGFNEEQFESVWKKYQ
>NZ_CP053972.1|WP_000026896.1|1889654_1890038_-|glycine-cleavage-system-protein-GcvH
MSIPNNLRYSEEHEWVKTEGNEVVIGITHFAQGELGDIVFVELPEVGATIEADEPFGSVESVKTVSELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMTNQD
>NZ_CP053972.1|WP_000640870.1|1888579_1888924_-|hypothetical-protein
MIYVEKVIIVEGTSDRRKIESIIREPVEIVCTNGTIGLSKMDELVDQFFDKEVYVLVDADDAGEKLRKQFRKEFPQAEHIYIDRSYREVATAPSTHLANVLWGADIDVYTEYLR
>NZ_CP053972.1|WP_003280640.1|1888267_1888576_-|thioredoxin-family-protein
MIEVIDWTGAEATSLIENEEKTVLYVYTPMCGTCQLAKKMLTVVEMTIEELKIGMLDLNYAPHLAKEYGIESVPCLLVFENGTLMKKIYAFHSVEYLYTELK
>NZ_CP053972.1|WP_001242142.1|1887770_1888115_-|hypothetical-protein
MRLYSLLQSFVNYANGQYHLEPLLRREEKTVNFRLGDESCSLQISRDYIELVHEERGTEQIICLDEKDIEQLVNGNVRLQMLMNDGRVQYSGTYRTMLLVESMFHICKPMPVGA
>NZ_CP053972.1|WP_000601782.1|1886331_1887357_-|methionine-ABC-transporter-ATP-binding-protein
MILLENVKKIYKAKSGDVTAVDNANLKIEKGEIFGVIGYSGAGKSSLIRLFNQLEKPTSGQITIANRVISTITGSELRKARQEIGMIFQHFNLLWSRTVRENIEFPLEIAGVDKTKRRKRVDELIHLVGLEGRGDAYPSQLSGGQKQRVGIARALANNPQVLLCDEATSALDPETTDQILDLLLDINKRLGLTIVLITHEMHVIRKICNRVAVMERGKIVETGPVLDVFRNPKQDITKRFVQQLTDSEDTNETIESLIEKYPDGKVIRLQFIGEAVERPVLQRLMQRSDIEVSILQGNIAQTNNGSYGSLVVHLNGEETAIQQAIEGIHQDQVELEVIAHG
>NZ_CP053972.1|WP_000359401.1|1885673_1886339_-|ABC-transporter-permease
MDKLLANVDWNQMLEATGETLYMTAIAALATFVLGLILGLLLFMTAKDNLWENKSINTVIGAFVNIFRSIPFIILIILLIPFTKILLGTILGASAALPALIIGAAPFYARMVEIALREIDKGVIEASKAMGAKTSTIILKVLIPESLPALVSGITVTTIALVGYTAMAGVVGAGGLGTLAYLEGFQRGNNDVTIVATICVLLVVFLIQWIGDSLTTRIDKR
>NZ_CP053972.1|WP_000735090.1|1884837_1885650_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLLLTALISTSIFGLAACGGKDKDEKKLVVGASNVPHAEILEKAKPLLEKKGIELEVKKFQDYVLPNKSLADKDLDANYFQHIPYLEKEIKDKKYDFEVAGKIHLEPIGVYSQKYKSLKELPDGATIIMSNSVADHGRGLAILQKEGILKVKDGVDPVKATPKDIADNPKNLKFKTDIEPGLLPQVYNNKEGDAVLINSNYAIDAKLNPEKDAIAIEGNDSPYANIVAVRKGDKDKKEIKALVEVLHSKEIEDFINKEYKGAVVPVKE
>NZ_CP053972.1|WP_001226751.1|1883959_1884766_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MRKILLSVVTALSVFTLAACGGKEENKLVVGASNVPHAVILEKAQPILEKKGIKLEIKKFQDYVLPNKALADKEIDANYFQHIPYLDKEIQEKGYKIVNAGKIHLEPMGIYSKKYKSLKELPDGGTVIMSNNVAERGRMLALLQKGGVIKLKDGVDVVKATVKDVVENPKNLKFKTDVEPGLSPKLYENNEGDALFINSNYAIDAKLNPTKDAIAIEGSDSPYANIIAVRKGDEKKKEIKELVEVLHSKEIQDFINKEYKGAVLPISE
>NZ_CP053972.1|WP_000929162.1|1882935_1883721_-|Fe-S-cluster-assembly-ATPase-SufC
MAGSTLTVKDLHVSIDGKEILKGVNLEVKGGEIHAIMGPNGTGKSTLSSAIMGHPKYEVTEGSIIIDGEDVLEMEVDERAQAGLFLAMQYPSEISGVTNADFLRSAINARREEGDEISLMKFIRTLDKNMEFLEMDPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINQMRGEEFGCLMITHYQRLLNYITPDFVHVMMNGRIVKSGGPELAQRLEAEGYDWIKKELGIEDETAEQEA
>NZ_CP053972.1|WP_000826875.1|1890856_1891384_-|hypothetical-protein
MKRLSYFLFFILICLVGAGCAKDKEGEKLEYNGRALVIGVVGEKPKDTFRNVKFEEMKLEALEKKSKEVDGFLIMKDHFQEASTEQYKNVFSSLKKPVFFIGLQDKLYSIFITKGIEYNSARKDVNAMYTQGFANIGSGEGQQWAIGLSNGGNTEESIHNMYIVVFQTIADYLNR
>NZ_CP053972.1|WP_000713769.1|1891528_1892176_+|phosphatase-PAP2-family-protein
MKKFKLSSFLPLSYILLLVLVSPLYDVLNKSTVHAVDVTTVVDDWIPFVKAFIIPYLLWFPYLYGALIYYCFADRKQYYVTLSSVIFGKLACFSIYYFWQTTVPRPTVVGTDVFSELVRYIYSIDQPVNCFPSIHVLTTFVIMLAAFKRREQHAFEYYILTFFGTLIILSTLFTKQHAFLDAVSGMTLASILYFGVQLLLAKEPIKVPVKQNHKM
>NZ_CP053972.1|WP_000666176.1|1892235_1893249_-|PTS-sugar-transporter-subunit-IIC
MKEYIMSRVFKASAGIAQGIFVSLGIGLLIENIGRIVDIPLLITIGVVAKSLMAPAIGAGIAFMLGANGLVIFSAMVAGAIGAGSISITEAGLIIKTGEPIGALLTATLAVYIGKRLSGKTALDMMLVPFAAILGSGLVGIWLSHNITPVLNTVGAFIKDSSAGSPFIASIVIAVVWGLLLISPASSAALAIALSLDGVAGGAALAGCVAQFIGFSVISAKENNLGGILAQALCTPKVQLPNITKNPMILVPTVVASAIVGPVSALIFQLEAGKEIAGLGLSSLIAPINLISSEGWEVVPAMVITYIIIPVAVSYILYIALKKAGRIHSGDMTVPQS
>NZ_CP053972.1|WP_106081637.1|1893271_1894441_-|L-lactate-dehydrogenase
MRSFYFLYVNKYIINIFPVVTNMTKMEYNNSQKGQKLCSIFHKVSMVSIVGTSIIKNVKNKRNRLYDQLGEIAMKRHTRKIAIIGTGLVGSSCAYSIVNQGICEELLLIDINHERAVGEAMDLSHCINFTNTRTKVYAGSYEDCKDMDIVIITAGPAPKPGQSRLDTLGASAKIMESVVGGVMESGFDGIFLLASNPVDIITYEVWKLSGLPRNRVIGTGTSLDSSRLRTILSEMLHVDPRSIHGYSLGEHGDSQMVAWSHVTVGGKPILQILEEQKERFGEIDLDEIVEKTAKAGWEIYKRKGTTYYGIGNSLAYIASSIFNDDHRVIAVSAILDGEYGEYDICTGVPAIITRDGIREVVELNLTEDEESRFAKSNDILRDYMKTIGY
>NZ_CP053972.1|WP_001002987.1|1894467_1894716_-|spore-coat-protein
MNEKDMVNDYLAGLNASLTSYANYIAQSDNEQLHQTLIQIRNQDEMRQRNMYEYAKQKSYYKPAAPANPMIVQQLKSQLSAE
>NZ_CP053972.1|WP_001180555.1|1894729_1894915_-|hypothetical-protein
MQNLTELEVENLRHLIGGHATIINKLEQYAQTCTDPQLKQMLQKDAQDARNTKQQLMTFLG
>NZ_CP053972.1|WP_000864824.1|1895028_1895748_-|MBL-fold-metallo-hydrolase
MKVISVGTVHQIAFLPRLFPINCYFVEEETGLTLIDAALPFCAKKILQSARKIGKPITNIVITHAHDDHVGALDVIKQVLPDVPVYISKRDACLLEGDKVLQEGERNTPIKVGVSKQINTIPDILLQEGDKVGSLVAIGAPGHTPGSMAFLDTRNDALIVGDAFQTRGGLAVAGQLKWLFPFPMFGTWDAEVSLASAQKLLEYKPSLLATGHGKMIENPLIQMQRAIEEAERNLSRKSL
>NZ_CP053972.1|WP_000416287.1|1895863_1897648_-|acyl-CoA-dehydrogenase-family-protein
MEKTVGNAVKGGSFLVDEITIDQVFTPEDFSSEHKMIAKTTEDFIVNEVLPELEYLEQHEFDRSVRLLKEAGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAGGFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDGEHFSAFIVEKEYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMKGELPLLQKAQKLQEELMMMMPEEVGDEPLALQKYLVTNAKKIGLMVAGLAAQKYGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEADAKETLIAVENGDMLRMMLSSLRKLTRHTPLNVIPKKREIAAKILEDERYTV
>NZ_CP053972.1|WP_001206329.1|1898036_1899209_-|acetyl-CoA-C-acetyltransferase
MREAVIVAGARTPIGKAKRGSLKTVRPDDLGALVVKETLKRANYEGPIDDLIFGCAMPEAEQGLNMARNIGGLAGLSYDVPAITINRYCSSGLQSIAYGAERIMLGHSEAVLSGGAESMSLVPMMGHVVRPNSRLVEAAPEYYMGMGHTAEQVAVKYGISREEQDAFAVRSHQRAAKALAAGNFADETVSVDVTLRSVGSNNKLQEETIIFAQDEGVRAETSLDILGKLRPAFNVRGSVTAGNSSQMSDGAASVLLMDREKAVSDGMKPLAKFRSFAVAGVPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAFASQSIQVIRELGLDEEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKRRNEQFGIVTMCIGGGMGAAGVFELL
>NZ_CP053972.1|WP_000486369.1|1899230_1901612_-|3-hydroxyacyl-CoA-dehydrogenase/enoyl-CoA-hydratase-family-protein
MFQIKKAAVLGSGVMGSGIAAHLANIGIPTLLLDIVPPALTKEEEAKGLTLEHKSVRNRFSNTAVQKLLKQKPAPLTVKGNLALIEAGNLEDDLERLADVDWIIEVVVENLDIKKKLFEKVDAVRKPGSIVSSNTSGISVEKMAEGRSDDFQKHFLGTHFFNPPRYLKLLEVIPTKETDPQVLSFMKLFGEDVLGKGVVIAKDTPNFIGNRIGTYGLLVTLQEMIKRGYSIGEVDSVTGPLIGRPKSATFRTLDVVGLDTFVHVANNVYENVQEEERDVFKVPAFMHDMLEKKWLGSKTGQGFFLKQGKEILELNPETMEYEARKKLKAASVELSKQEKGLANKLKALVYAKDRAGELLWNIITPTLLYSAKLHKEIADDIVAIDQAMKWGFGWEQGPFEVWDAIGVEKSVQKMEENGVVVPTWVKEMLEKGFTTFYKHDNGDSYYYDNGEYKLIERNKKAISLKQLKAKNGVLKKNSGASLIDLGDGILCLEFHSKSNAIGMDITQMINYAVDEVEKNYKGLVIGNQSKNFCVGANLAMILMEAQDDNYFEIELVVKNFQDAMTKIKYSSKPVVAAPYGMTLGGGTEVCLPAASIQASSETYMGLVEVGVGLIPGGGGNKELYIKHLNKMPNGVEFDLQKVANKVFESVAMAKVSTSAQEAVSNNFLGDKDGISVNGDHLLYDAKQKALALYEAGYKAPIRKKIPVVGETGYATLVLGAEAMHLSGYISEHDLHIAKKLAYVIAGGKVPYGTEVDEQYLLDVEREAFISLVSEMKSQARMQHMLVKGKPLRN

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Crispr_ID: NZ_CP053972_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053972_2

2146079-2146212

Orphan

Consensus_repeat	Method
GTTGATTTCTCTTCTTTTTGAGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053972_2

>merge|NZ_CP053972|2|2146079-2146212|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGGTTCTTCTTTTTTGTCACTAGTTGAACCGCTTGTTGATTTCTCTTCTTTTTGAGACTTGTCTTCTGTTTTATTTTCTGGTTTCGTGCTCGTTGACTTCTCTTCTTTTTGAGA

>NZ_CP053972|2|2|2146079-2146212|CRISPRCasFinder
GTTGATTTTTCTTCTTTCTTCGG	TTCTTCTTTTTTGTCACTAGTTGAACCGCTT
GTTGATTTCTCTTCTTTTTGAGA	CTTGTCTTCTGTTTTATTTTCTGGTTTCGTGCTC
GTTGACTTCTCTTCTTTTTGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053972.1\|WP_014894859.1\|2139554_2140322_-\|tyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|226870
NZ_CP053972.1\|WP_000931959.1\|2143150_2143585_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP053972.1\|WP_000998960.1\|2155226_2156729_-\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_CP053972.1\|WP_000411275.1\|2151165_2152470_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|236486
NZ_CP053972.1\|WP_000672657.1\|2149937_2150957_-\|stage-II-sporulation-protein-D	unknown	unknown	gnl\|CDD\|274332
NZ_CP053972.1\|WP_003272396.1\|2152509_2153220_-\|YwmB-family-TATA-box-binding-protein	unknown	unknown	gnl\|CDD\|370056
NZ_CP053972.1\|WP_000457978.1\|2144013_2145015_-\|rod-shape-determining-protein	unknown	unknown	gnl\|CDD\|237563
NZ_CP053972.1\|WP_001207164.1\|2140433_2141135_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP053972.1\|WP_000144420.1\|2147100_2147808_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_CP053972.1\|WP_000544012.1\|2145175_2145448_-\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP053972.1\|WP_000467945.1\|2142131_2142809_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP053972.1\|WP_000243437.1\|2148831_2149839_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP053972.1\|WP_000568213.1\|2156725_2158588_-\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_CP053972.1\|WP_000008903.1\|2145756_2145891_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053972.1\|WP_000367477.1\|2153704_2155225_-\|NADH-quinone-oxidoreductase-subunit-NuoN	unknown	unknown	gnl\|CDD\|235603
NZ_CP053972.1\|WP_000757801.1\|2138436_2139315_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP053972.1\|WP_000170827.1\|2147807_2148650_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP053972.1\|WP_000393115.1\|2141124_2141868_-\|capsular-polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NZ_CP053972.1\|WP_000847747.1\|2137758_2138418_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	unknown	unknown	gnl\|CDD\|274398
NZ_CP053972.1\|WP_000057889.1\|2153265_2153502_-\|DUF1146-domain-containing-protein	unknown	unknown	gnl\|CDD\|227173

Protein	Function_ID	Function_description	E-value
NZ_CP053972.1\|WP_014894859.1\|2139554_2140322_-\|tyrosine-protein-phosphatase	gnl\|CDD\|226870	COG4464, CapC, Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane].	4.47552e-106
NZ_CP053972.1\|WP_000931959.1\|2143150_2143585_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	5.26499e-95
NZ_CP053972.1\|WP_000998960.1\|2155226_2156729_-\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	1.2119e-172
NZ_CP053972.1\|WP_000411275.1\|2151165_2152470_-\|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl\|CDD\|236486	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated.	0
NZ_CP053972.1\|WP_000672657.1\|2149937_2150957_-\|stage-II-sporulation-protein-D	gnl\|CDD\|274332	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination].	6.60741e-135
NZ_CP053972.1\|WP_003272396.1\|2152509_2153220_-\|YwmB-family-TATA-box-binding-protein	gnl\|CDD\|370056	pfam08680, DUF1779, TATA-box binding. TATA-box_bdg is a family of bacterial proteins. YwmB from Bacillus subtilis contains a circularly permuted TATA-box binding protein-like fold. Jian-Xiang Liu, Qi Xie, Jun Lin. Protein Structural Data Mining and Evolutionary Bioinformatic Analysis on Domains of TATA-box Binding Protein-like Fold. Life Science Journal 2014; 11(2): 298-302 (not yet in PubMed 27-02-2014).	1.11897e-33
NZ_CP053972.1\|WP_000457978.1\|2144013_2145015_-\|rod-shape-determining-protein	gnl\|CDD\|237563	PRK13928, PRK13928, rod shape-determining protein Mbl; Provisional.	0
NZ_CP053972.1\|WP_001207164.1\|2140433_2141135_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	8.02666e-84
NZ_CP053972.1\|WP_000144420.1\|2147100_2147808_-\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	3.22291e-09
NZ_CP053972.1\|WP_000544012.1\|2145175_2145448_-\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	1.17272e-38
NZ_CP053972.1\|WP_000467945.1\|2142131_2142809_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	5.32085e-82
NZ_CP053972.1\|WP_000243437.1\|2148831_2149839_-\|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.63553e-31
NZ_CP053972.1\|WP_000568213.1\|2156725_2158588_-\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_CP053972.1\|WP_000367477.1\|2153704_2155225_-\|NADH-quinone-oxidoreductase-subunit-NuoN	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	1.04015e-150
NZ_CP053972.1\|WP_000757801.1\|2138436_2139315_-\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	0
NZ_CP053972.1\|WP_000170827.1\|2147807_2148650_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.14749e-90
NZ_CP053972.1\|WP_000393115.1\|2141124_2141868_-\|capsular-polysaccharide-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	1.97657e-83
NZ_CP053972.1\|WP_000847747.1\|2137758_2138418_-\|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	9.86921e-99
NZ_CP053972.1\|WP_000057889.1\|2153265_2153502_-\|DUF1146-domain-containing-protein	gnl\|CDD\|227173	COG4836, COG4836, Predicted membrane protein [Function unknown].	1.23409e-23

>NZ_CP053972.1|WP_000008903.1|2145756_2145891_-|hypothetical-protein
MSFLFVLSTAIILLFVLFTLYYYIAGKKEVPHHQLLEEELEREE
>NZ_CP053972.1|WP_000544012.1|2145175_2145448_-|sporulation-transcriptional-regulator-SpoIIID
MHDYIKERTIKIGKYIVETRKTVRVIAKEFGVSKSTVHKDLTERLPEINPELANEVKEILDYHKSIRHLRGGEATKQKYRKEDVEKPVRQ
>NZ_CP053972.1|WP_000457978.1|2144013_2145015_-|rod-shape-determining-protein
MFARDIGIDLGTANVLIHVKGKGIVLNEPSVVAIDRNSGKVLAVGEEARSMVGRTPGNIVAIRPLKDGVIADFEITEAMLKYFINKLDVKSFFSKPRILICCPTNITSVEQKAIREAAERSGGKTVFLEEEPKVAAVGAGMEIFQPSGNMVVDIGGGTTDIAVLSMGDIVTSSSIKMAGDKFDMEILNYIKRKYKLLIGERTSEDIKIKVGTVFPGARSEELEIRGRDMVTGLPRTITVCSEEITEALKENAAVIVQAAKGVLERTPPELSADIIDRGVILTGGGALLHGIDMLLAEELKVPVLIAENPMHCVAVGTGIMLENIDRLPKRALR
>NZ_CP053972.1|WP_000931959.1|2143150_2143585_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MLNIEQIKEIIPHRYPFLLVDKILEVDEGKRAVGIKNVSANEEFFNGHFPDYAVMPGVLIVEALAQVGAVAVLKKEENRGRLAFFAGIDNCRFKKQVRPGDQLRLEVEMTRVRGPIGKGKAIATVDGEVACEAEITFAIGDKKE
>NZ_CP053972.1|WP_000467945.1|2142131_2142809_-|CpsD/CapB-family-tyrosine-protein-kinase
MFGRKKRKPLRQLITHKEPKSRITEQYRNIRTNIEFTSVDNHVRSIIVTSADPGDGKTTTIANLAVVFGQQGKKVLLIGADLRKPTIQNLFAIHSSNGLTNLLSGQAKLMQCIQKTDIENVYLMAAGPIPPNPAELLGSRAMDEALLEAYNMFDIILIDTPPVLAVTDAQILANKCDGIVLVVRSEKTEKDKIVKAKQILDKASGKLLGVVLNDKREEKEQYGYY
>NZ_CP053972.1|WP_000393115.1|2141124_2141868_-|capsular-polysaccharide-biosynthesis-protein
MEETISLKELFHIFKKRLAMILVIAFGAAIVSAIISFFFMTPIYQSSTQILVNQKKQEGAMFQAGEIQTNIQLTNTYKVIIKSPVILEQVNEKLNLNMTAQELTKKVNVANEKDSQVIAVTAEDKDPKIARDIANATADVFKGEVAKIMNVDNVTVISKAEVAENQSPIKPAPMLNIAIAFIVGLMASVGLAFLLEYLDNTVKKEEDVENLLGLPVLGIVARMDEETLNVKSHAPSSRKVRGQTIGS
>NZ_CP053972.1|WP_001207164.1|2140433_2141135_-|CpsD/CapB-family-tyrosine-protein-kinase
MALNLFKKKKNHRQRRQLIAHQQPKSPISEQYRNIRTNIEFAAVDTNLHSLMVTSANPSEGKTTTTANMAVVFAQQGKKVLLIDADMRKPAMHQMFQVDNIFGLTNVLTHSERLEKCVQTTSVDNLHFLACGPIPPNPAELLGSKSMKELLGQAYSMYDLVIFDMPPILAVTDAQIMANVCDASILVVRSESTEKETAVKAKGLLESAKGKLLGVVLNDREREEGLYYYYGAN
>NZ_CP053972.1|WP_014894859.1|2139554_2140322_-|tyrosine-protein-phosphatase
MIDLHCHILPGIDDGAQTITDSLTMAQQAVSEGIHTIVATPHHQNGKYINEYTSVIHHVKQLNDELQQYNIPLTILPGQEIRLYGDLLEDYEAGKIVTLNETNKYIFIEFPSNHVPRYAEHLLYELRVKGMIPIIVHPERNAELIERPDKLYNLVNKGALTQVTAGSLLGNFGKKIKKFSLQLVEHNLTHMVASDAHNTTSRGFHLAESYELIEKEFGTSVMSDLKENPYLLISGKAIYKEDPEQIRRKKLFGIF
>NZ_CP053972.1|WP_000757801.1|2138436_2139315_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKVRKAIIPAAGLGTRFLPATKAMPKEMLPIVDKPTIQYIVEEAIESGIEDIIIVTGKGKRAIEDHFDHSFELEQNLLEKGKYEMLEKVQASSKINIHYIRQKEPKGLGHAVWCARKFIGNEPFAVLLGDDIVQAETPCLRQLMNQYEGTQSSVIGVQTVPENETHRYGIIDPIERNGRSYQVRQFVEKPAEGTAPSDLAIMGRYVLTPEIFMFLEDQQTGAGGEIQLTDAIQRLNEMQRVFAYDFEGTRYDVGEKFGFIRTTIEMALQQKELKEQLIKYMVELVHKEAIK
>NZ_CP053972.1|WP_000847747.1|2137758_2138418_-|exopolysaccharide-biosynthesis-polyprenyl-glycosylphosphotransferase
MKTGENIARDYQITPDTQTIQVESNQSKIYLGIKYLLDVMFSLVGLILLMPVILIFSILIILESPGSPFYLQERLGLNGKRFKVIKLRSMRNDAEKNGAKWAEKNDPRVTKIGLFIRKTRIDELPQLFNILKGDMSLVGPRPERPIFTEKFERDIPGFKKRLEVKPGLTGWAQVNGGYEITPKEKLNLDVYYINHASIILDFKIIIKTVRVVITGDGAR
>NZ_CP053972.1|WP_000144420.1|2147100_2147808_-|ABC-transporter-permease
MTFSMKRFSAIVRKEINDAGKNSQVILMALLPILLAVFYSNMDSIKEFFAGFVIVMTITMVGSYVQAIIIAEEKEKHTLRVLMLSPASPIEVILGKSVLTVFFVLASSFISLVILDTFKGNIGMLVIIILIGTLLCVVLGTIVGLLSQNIAQTSILGLPIFIIFIMGPMLQEMVKNEFIIKVVNLLPTNHVMEALQKVIKGEGFIAIQEHILNNTIWTICLIILCIIVYKKKQLD
>NZ_CP053972.1|WP_000170827.1|2147807_2148650_-|ABC-transporter-ATP-binding-protein
MTLAIEMKDVMKSFDGKTALRNVNIEVKQGEIFGFLGPSGSGKTTTVKILTSQLLHSVGTVRVLGKDITGPSSIDYKRIGILTDNSGLYERLSIYDNLLLFCDLYDCKKERIDEVLAQVNLLDDKKTPVKKLSKGMKQRVTLARAILHKPDILFLDEPTSALDPVNVQNIHKILKDLNEEGTTIFLTTHNMDEAETLCNRIAFLCGGEIVALDTPENLRLQYAKDQIEVVLKDKQKEVVQKDELGAKRISEWMKKGELLSIHSHEPTLGDIFIEVTGRGL
>NZ_CP053972.1|WP_000243437.1|2148831_2149839_-|LytTR-family-transcriptional-regulator-DNA-binding-domain-containing-protein
MVLLELKQLGKTNQLPVIDLKVAKGQCVVLQCNNHTAKVLHRIIIGEEEASTGNVLFEGGAIGKKNYPRIGFCFLKDEAYDRLKVKEYFKFLIGLYESKISIEEVVQSVGLLDKLNVKIEKLSFSEKRRLHIGRVMIHNPDLVILEEPEQNVDIESTIIIRKAIMKMKEQGKAIFITSSFLSDALSLTEDVYILNNDGVKKIEIEQEEVEEVGEEKVIQMIPQMKLERIPAKVNDKIILLDPMEIHFIETQNGVTHIHVREGDFVCALTLSELEARLTGFGFFRCHRSYLVNLQRVREVITWTRNSFSLILDDERKSSIPLSKGRMDELKGVIGL
>NZ_CP053972.1|WP_000672657.1|2149937_2150957_-|stage-II-sporulation-protein-D
MKFSKPLFITVALLIALVIIVPAALVIPFAKAKVGEETASKTPPAIESIPAPGKVDTAVQVAVYREKQKKVESLPMEEYVTGVVASEMNASFEIEALKAQALAARTFVVQRMLSGGKKNNADVTDTVKDQVYKSKEELKKQWGNNYENNLKKIEEAVSKTAGQVLTYDGKPISASFFSTSNGRTENAADYWGNDYPYLKSVDSPWDQASPKFTSEQTFTVADFQKRLGVKVLADGKVGNIKDLTEGKRVKDVAFQGKTLTGKEVREKLDLRSSDFTWKQRGDKIIITTKGFGHGVGMSQYGANGMAAEGKKYTDIVAHYYKGVEIKTMNDYEGKLMVKK
>NZ_CP053972.1|WP_000411275.1|2151165_2152470_-|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKIIVRGGKRLNGTVRVEGAKNAVLPIIAAALLASDGKNVLSEVPVLSDVYTINEVLRHLNAEVVFENNQVTIDSSKELNIEAPFEYVRKMRASVQVMGPLLARNGRARIALPGGCAIGSRPIDQHLKGFEAMGAKVQVGNGFVEAYVEGELKGAKIYLDFPSVGATENIMSAATLAKGTTILENAAKEPEIVDLANFLNAMGAKVRGAGTGTIRIEGVDKLYGANHSIIPDRIEAGTFMVAAAITGGDILIENAVPEHLRSITAKMEEMGVKIIEENEGVRVIGPDKLKAVDIKTMPHPGFPTDMQSQMMALLLQADGTSMITETVFENRFMHVEEFRRMNADIKIEGRSVIMNGPNSLQGAEVGATDLRAAAALILAGLVSEGYTRVTELKHLDRGYVDFHKKLAALGATIERVNEKVEEVKEQEVSDLHA
>NZ_CP053972.1|WP_003272396.1|2152509_2153220_-|YwmB-family-TATA-box-binding-protein
MKLKLKAILIVALSVVLFLVGYREMKPISDEQKMESMIKALEKNDAKVEKWSWLARETKTISNIHTFQKLLNDVKDKANIQKWEVEQSPDGYKATSYKKFASHEERVVVTWSKENTKENTFIIFEVSGAKWDPKYVQKVNKIFSEKPIIYTCVQGVLNDKIEGVLQNKTNQVLKDLSARAIEQVEERAFVSVSAYNKKWDDALSTNREKINVQIAIRSTDNKDTIVVGTPIITSEY
>NZ_CP053972.1|WP_000057889.1|2153265_2153502_-|DUF1146-domain-containing-protein
MAQLLGQQALIAIVSHLLFITITWWALQGIHIERLMKSGKVLQTRVLLILITIAIGTSVSNFFLDYLGYSKSLTYLVK
>NZ_CP053972.1|WP_000367477.1|2153704_2155225_-|NADH-quinone-oxidoreductase-subunit-NuoN
MDMNTLLSLSWHLMVPEFIILGAAILLSICDLFFKLNHRYVALGAIAAIVLAIVSLITLYSEPAGDILNGSFVLDGFSKGFKTLLLGASALILCIAMSDDKKNPIEDKGEYYYLFLMALLGAMFMASSVDFITLFVGLELLSLSSYILVGIRKKNRASNEAAMKYVISGGIGTAITLFGMSYLYGITGSTNIVDMQKVLTGELASGIQLLLALAFLLLLVGLSFKIATVPFHMWAPDVYEGATTPVTAFLGTISKIAGFLLIIRLFLMVFASVLIQGDMQSLYGHMSIYIAVLASITMIVGNVVALKQYNIKRLFAYSGIAHAGYLLVPLVALSPFTLDSMWFYMLAYMLMNIGAFAIIHGLILQNDKENITIFTGLYKKSPFAAIMMTIFILSLAGIPGTAGFIGKINIFLGALHVEPAHYVLASIMMGTTVVSFVYYFRILQQMFFRTGETEERIRLPLNIKVVMSLCAISIVILGIMPMIGYNFFYEYFPLMKDFFFLGNVVQ
>NZ_CP053972.1|WP_000998960.1|2155226_2156729_-|NADH-quinone-oxidoreductase-subunit-M
MNDLLLTFFIFSPLLGILLLVLTSKKELRTVRALGLFGTALPFGIAIVLACTYASGKSLSLFDEKVKWIKFGDFTAVDKRWFSIYYELGIDGLSLIMMVLTALLAMLAAIAAFSIKSNLKAFYMLLLMLEIGMLGVFAAQNLMLFFIFLEITLPPMFLLIGKWGKLSSEKAAYSYLIYNGIGSAILLIVFSILFAKTGTTNIVELKEILRSVSAGGELVIPSSLQLGVFIAIMIAFAIKLPVFPLHRWMVNVHIEAHPAVVMLHAGVLLKIGAYGIIRFGKGLFPEYFHDVATLIAILGVINLLYGTFLALIQTDFRKVLAYSSISHMGIVLMGLASLNAPGTQGALFQVVSHGLIAALLFFLLGVIEQRFGTSDIMVLGGLAKSVPILSGFFLAGGMASLGLPGMSGFVSEFLAFLGLFQGEPVIAAVGVIGIILTAVYVLRATLQVTFGKKEWEAKSDIHGWEYVPVLLLIFCIIAIGVMPEILGDPLQNTLKTLGVK
>NZ_CP053972.1|WP_000568213.1|2156725_2158588_-|NADH-quinone-oxidoreductase-subunit-L
MIDYAWLIPLFPLVSFLLLIIFGKKIREGSSVLSIFFVFLSFILAVLVLIERFSEASVKHKWVWLRAGDVDISFGFEVTALGALMLFIVTLVSLLVHVYSKGYMKGDERLPTFYAYLGLFTFAMLGLVISTNLLQLYIFWELVGLGSFLLIGFYFFKEEAKAAAKKAFIMTRIGDVGLFIGMILIFWYAGSFEYDAIFRAIYTGALPPYMITITAILIFIGAMGKSGQFPLHTWLPDAMEGPTPVSALIHAATMVAAGVYLVATMFPLFSASAVAMQTVAIVGAFTAIFAASIGLVQTDIKRVLAYSTVSQLGYMMLALGSAGYVAGIFHLTTHAFFKALLFLAAGSVIHAVHTQNINKMGGLQKKMKVTGTLFLIGTLAISGVPLLSGFFSKDEILAATWMNGNYFLFVLAVIAAFLTAFYMFRLYFLVFTGEAKTKEDVHESPRVMKYPMIVLGVLAVVAGYINTPWFGTFLGDWLTKDVGFKVEEAHGPVWIMIVATLVSFAGIALAYFIYGKKSISREWAGGTGTSFYNLLKEKYYVDELYNMTVIPITKGIARVLRLFEVYVVEGIAVLIGSVVKGTSNLGSKLQNGNVQVYGTVTAVSLAVLVIILLYTGGDLR

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Crispr_ID: NZ_CP053972_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053972_3

3057784-3057859

Orphan

Consensus_repeat	Method
ATCATCATCATGGAGGACACAATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP053972_3

>merge|NZ_CP053972|3|3057784-3057859|CRISPRCasFinder
ATCATCATCATGGAGGACACAATCATGGTGGGCACAATCATAACGGCGGACATCATCACCATGGAGGACACAATCA

>NZ_CP053972|3|3|3057784-3057859|CRISPRCasFinder
ATCATCATCATGGAGGACACAATCA	TGGTGGGCACAATCATAACGGCGGAC
ATCATCACCATGGAGGACACAATCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053972.1\|WP_000723120.1\|3051610_3052576_+\|L-threonine-3-dehydrogenase	unknown	unknown	gnl\|CDD\|187580
NZ_CP053972.1\|WP_000743027.1\|3056003_3057533_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|171510
NZ_CP053972.1\|WP_000885973.1\|3049430_3050162_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP053972.1\|WP_000387173.1\|3071169_3072630_+\|alanine:cation-symporter-family-protein	unknown	unknown	gnl\|CDD\|376500
NZ_CP053972.1\|WP_000185806.1\|3067260_3068367_-\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP053972.1\|WP_000760052.1\|3047506_3048565_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP053972.1\|WP_000656109.1\|3064461_3066123_+\|alpha,alpha-phosphotrehalase	unknown	unknown	gnl\|CDD\|274115
NZ_CP053972.1\|WP_000193671.1\|3068347_3069850_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_CP053972.1\|WP_000925213.1\|3046505_3047510_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|376439
NZ_CP053972.1\|WP_001248844.1\|3053095_3054979_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|226921
NZ_CP053972.1\|WP_001167972.1\|3048577_3049399_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP053972.1\|WP_000448446.1\|3060317_3061715_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129983
NZ_CP053972.1\|WP_000987242.1\|3062167_3062878_+\|trehalose-operon-repressor	unknown	unknown	gnl\|CDD\|274116
NZ_CP053972.1\|WP_000892989.1\|3054982_3055876_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP053972.1\|WP_003309076.1\|3070866_3071010_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053972.1\|WP_000513939.1\|3063020_3064448_+\|PTS-system-trehalose-specific-EIIBC-component	unknown	unknown	gnl\|CDD\|273916
NZ_CP053972.1\|WP_001189930.1\|3052635_3053058_+\|NUDIX-hydrolase	unknown	unknown	gnl\|CDD\|239217
NZ_CP053972.1\|WP_000401661.1\|3070038_3070860_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|225213
NZ_CP053972.1\|WP_000893348.1\|3058582_3060286_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP053972.1\|WP_000095913.1\|3050375_3051566_+\|glycine-C-acetyltransferase	unknown	unknown	gnl\|CDD\|235893

Protein	Function_ID	Function_description	E-value
NZ_CP053972.1\|WP_000723120.1\|3051610_3052576_+\|L-threonine-3-dehydrogenase	gnl\|CDD\|187580	cd05272, TDH_SDR_e, L-threonine dehydrogenase, extended (e) SDRs. This subgroup contains members identified as L-threonine dehydrogenase (TDH). TDH catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. This group is distinct from TDHs that are members of the medium chain dehydrogenase/reductase family. This group has the NAD-binding motif and active site tetrad of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	0
NZ_CP053972.1\|WP_000743027.1\|3056003_3057533_-\|cardiolipin-synthase	gnl\|CDD\|171510	PRK12452, PRK12452, cardiolipin synthase.	0
NZ_CP053972.1\|WP_000885973.1\|3049430_3050162_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.07831e-20
NZ_CP053972.1\|WP_000387173.1\|3071169_3072630_+\|alanine:cation-symporter-family-protein	gnl\|CDD\|376500	pfam01235, Na_Ala_symp, Sodium:alanine symporter family.	0
NZ_CP053972.1\|WP_000185806.1\|3067260_3068367_-\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	6.39068e-40
NZ_CP053972.1\|WP_000760052.1\|3047506_3048565_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	8.98999e-88
NZ_CP053972.1\|WP_000656109.1\|3064461_3066123_+\|alpha,alpha-phosphotrehalase	gnl\|CDD\|274115	TIGR02403, Trehalose-6-phosphate_hydrolase, alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.	0
NZ_CP053972.1\|WP_000193671.1\|3068347_3069850_-\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP053972.1\|WP_000925213.1\|3046505_3047510_+\|iron-ABC-transporter-permease	gnl\|CDD\|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	6.49512e-87
NZ_CP053972.1\|WP_001248844.1\|3053095_3054979_-\|VWA-domain-containing-protein	gnl\|CDD\|226921	COG4548, NorD, Nitric oxide reductase activation protein [Inorganic ion transport and metabolism].	1.90481e-97
NZ_CP053972.1\|WP_001167972.1\|3048577_3049399_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	8.44295e-133
NZ_CP053972.1\|WP_000448446.1\|3060317_3061715_-\|amino-acid-permease	gnl\|CDD\|129983	TIGR00905, Arginine/ornithine_antiporter, transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions. [Transport and binding proteins, Amino acids, peptides and amines].	1.33606e-97
NZ_CP053972.1\|WP_000987242.1\|3062167_3062878_+\|trehalose-operon-repressor	gnl\|CDD\|274116	TIGR02404, Trehalose_operon_transcriptional_repressor, trehalose operon repressor, B. subtilis-type. This family consists of repressors of the GntR family typically associated with trehalose utilization operons. Trehalose is imported as trehalose-6-phosphate and then hydrolyzed by alpha,alpha-phosphotrehalase to glucose and glucose-6-P. This family includes repressors mostly from Gram-positive lineages and does not include the TreR from E. coli. [Regulatory functions, DNA interactions].	1.60325e-130
NZ_CP053972.1\|WP_000892989.1\|3054982_3055876_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	6.9487e-37
NZ_CP053972.1\|WP_000513939.1\|3063020_3064448_+\|PTS-system-trehalose-specific-EIIBC-component	gnl\|CDD\|273916	TIGR01992, phosphotransferase_system_trehalose_permease, PTS system, trehalose-specific IIBC component. This model represents the fused enzyme II B and C components of the trehalose-specific PTS sugar transporter system. Trehalose is converted to trehalose-6-phosphate in the process of translocation into the cell. These transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci and Streptococci which contain their own A domain as a C-terminal fusion. This family is closely related to the sucrose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively). In E. coli, B. subtilis and P. fluorescens the presence of this gene is associated with the presence of trehalase which degrades T6P to glucose and glucose-6-P. Trehalose may also be transported (in Salmonella) via the mannose PTS or galactose permease systems, or (in Sinorhizobium, Thermococcus and Sulfolobus, for instance) by ABC transporters.	0
NZ_CP053972.1\|WP_001189930.1\|3052635_3053058_+\|NUDIX-hydrolase	gnl\|CDD\|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	1.7486e-24
NZ_CP053972.1\|WP_000401661.1\|3070038_3070860_+\|phosphotransferase	gnl\|CDD\|225213	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only].	2.62392e-28
NZ_CP053972.1\|WP_000893348.1\|3058582_3060286_+\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	2.99317e-109
NZ_CP053972.1\|WP_000095913.1\|3050375_3051566_+\|glycine-C-acetyltransferase	gnl\|CDD\|235893	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional.	0

>NZ_CP053972.1|WP_000743027.1|3056003_3057533_-|cardiolipin-synthase
MKKPIVQLLLIFTIVSIVLFLLNTSYISLYTFVGALWSITIVGISFVIFIENRSPQSTLAWFLVLALLPIIGVLLYAIFGRSRWRRKKHLHRSEEQRKLFREILEGRRLELLLTVPLNERSIHLTEVIQKFGGGPAADKTTTKLLTNGDQTFSEILRAIEQAKHHIHIQYYIYKSDEIGTKVRDALIQKAKDGVIVRFLYDGLGSNTLRRRFLQPMKEAGIEIVEFDPIFSAWLLETVNYRNHRKIVIVDGEIGFTGGLNVGDEYLGRSKKFPVWRDSHLKIEGKALYKLQAIFLEDWLYASSGLNTYSWDQFMNRQYFPGKEISHAEGAVQIVASGPSSDDKSIRNTLLAVMGSAKKSIWIATPYFIPDQETLTLLRLSAIAGIDVRILYPGKSDSIISDQASQSYFTPLLKAGASIYSYKDGFMHAKIVLVDDTIATIGTANMDVRSFELNYEIISVLYESKTVHDIKRDFEKDFKHSTEIKWNSFQKRSIKKRILESFMRLISPLL
>NZ_CP053972.1|WP_000892989.1|3054982_3055876_-|MoxR-family-ATPase
MLEQFHIHSDLKQQLSTIHEKNKQEAGENAHLIGTKIYKASDNSIIEDAITALLLGKNILLKGPTGSGKTVLAETLSSLFQKPMHSINCSVDLDVEGILGYNTLQTKDGASEVSFVNGPLMKAMKNGHFLYIDEINMAKPETLPLLHGALDYRKMITNPFTQEVVYGDEEYRVIAAINEGYVGTSELNEALKNRFVIIEVPYIQGDTLKELLLAESKLNDVATIEKFVAFASDLMPLARDGRVSEEAASIRGIIDACDLGVYIPVMRAIERSIIAKLNDETEQMTVRELAESYFFEG
>NZ_CP053972.1|WP_001248844.1|3053095_3054979_-|VWA-domain-containing-protein
MRQIFSDKKIDASLFLQMENLMYALLKEDDAYLEYGYKAYYDEIEKKVVISHFWDDRKEEDTVIGLKSEVFLKALGNKHYSDMTLIRSYAIELQESPLKKFLTQLFVLLEDLRVEEIVKNLRPGTKHIFKRRKEMYRNYFGSQNEINRVRNYHGDRLFCLCYLSLTSDKYEMFNNEYFEQIEAILHETFQARNTEDIMYVVEKIRYRLEALLESDMLNNYFGHAPLYLSVLADEKNCRVEDLANDDTQLIDDDENKNKMDESFSTWHRENKNNENENFLRFELESGTKTNMMGDTARESEDGDQALGSVQGTSQKSTQSNFDGADTEEARASHASSQHDGAYGKYNVGASHTFKEARKANIDEKKDYQAIKSVVNKDVKELKKIIEKTIENKTNANNDKYYGRLRKKFLRIYTEKQPRMFYKKGQESQELDVAFQLLVDCSGSMYNKMEETKKSVVLFHEALKSLKIPHAISGFWEDASSAKPEDKPNVIHEVVNYKNSTLPNVGPEIMQLREEEDNRDGYIIRIVSEKLAKRPEKHKFLLVFTDGEPSALDYQQDGILDTHEAVKLARKSGMEVIGIFIEEGEAKEATYQLMKNIYNHHFLVANHAEDLRLKIKPLLKKLLLKTIE
>NZ_CP053972.1|WP_001189930.1|3052635_3053058_+|NUDIX-hydrolase
MQRVDVVYALIHDEETDKILMVHNAEQNVWSLPGGAVEKGEILEEALIREVKEETGLIATLGGLVAINEKFFEESGNHALFFTFRANVVKGELIAEDEGEISAIEWVDRTIANERFPYYDGGFESLLEVAIPYKFQPETK
>NZ_CP053972.1|WP_000723120.1|3051610_3052576_+|L-threonine-3-dehydrogenase
MKKILVTGSLGQIGSELVMKLRDVYGASNVIATDIRETDSEVVKSGPFETLDVTDGQKLHDIAKHNEVDTIIHLAALLSATAEKNPLFAWNLNMGGLVNALEAARELNCKFFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGLISYVAPPGGGTTDYAVEIYYEAIKKGAYTSYIAEGTYMDMMYMPDALQAIISLMEADPSKLVHRNAFNITAMSFEPEQIAASIRKHIPTFTMDYAVDSARQTIADSWPNSIDATAAMKEWGFKAEYDLDKMTTDMLAKLKKKLTAELVMN
>NZ_CP053972.1|WP_000095913.1|3050375_3051566_+|glycine-C-acetyltransferase
MSSKTLAKFLEENLEDLKSKGLYNVIDPLESSNGPIITIGGKEYINLSSNNYLGLATDSRLQEAAIGAIHKYGVGAGAVRTINGTLDLHIKLEETIAKFKHTEAAIAYQSGFNCNMAAISAVMDKNDAILSDELNHASIIDGSRLSKAKIIVYKHSDMEDLRQKAIAAKESGLYNKLMVITDGVFSMDGDVAKLTEIVEIAEELDLMTYVDDAHGSGVLGKGAGTVKHFGLSDKVDFQIGTLSKAIGVIGGYVAGKQNLIDWLKVRSRPFLFSTALTPADAAACMRSIEILMESTELHDRLWENGRYLKQGLKELGFNIGESETPITPCIIGDEVLTQEFSKRLNEEGVYAKSIVFPTVAKGKGRVRNMPTAAHTKEMLDEAIRKYEKVGKEMGII
>NZ_CP053972.1|WP_000885973.1|3049430_3050162_-|class-I-SAM-dependent-methyltransferase
MAFTESDVYNNTAFFEQYMKRRYRENSPNESIEKPVFFQLIGHVQGKQILDLGCGDAKFGAELLEKGCYSYTGIEGSELMYEKAKNQLENKNGSVHFLNLKDYTYPSSTFDLVTSRLALHYIEHLDTIFQNVFQTLKTNGTFTFSVQHPVITSSFESLQTSGKRTSWLVDDYFKLGKRVEPWIDQEVIKYHRTTEEYFTLLQQAGFTITSLKEATPNPIYFQNEEEYKRRLRIPLFLLFSCTK
>NZ_CP053972.1|WP_001167972.1|3048577_3049399_+|ABC-transporter-ATP-binding-protein
MQKALETKRLTLSYGETSIIDELNLEIPKGEITIFIGSNGCGKSTLLRSLARLLKPTTGDILLDNQAIQSMQTKQIARQMAILPQGPQAPEGLTVLQLVKQGRYPYQTWLKQWSEKDEEMVQKALAATGMTEFAERDVHALSGGQRQRAWIAMTLAQDTDIILLDEPTTYLDMTHQIEVLDLLFELNETEQRTIVMVLHDLNLACRYADNIVAIQDKQIYAQGKPEEVVDEKLVRDVFRMECQISTDPLFGTPLCIPHGRGRRVVKEVAQAIR
>NZ_CP053972.1|WP_000760052.1|3047506_3048565_+|iron-ABC-transporter-permease
MKKYIPFRIGKGELSFLMYKRACLVLLSLLLVLIGLFFASAGMGDMKIAPYDVWQAITGNGDAMSNMVVNKFRMPRILIAILVGIALAVAGCILQGLVRNPLASPDIIGITGGASVAVVLFLALFSDKNNALTVSIHYMPLAAFAGATIVAVFVYLFAWQNDGLSPISLVLIGVGFWALTKAATTLFMLLAPIYQASQANVWITGTVYGSSWQNVMVLAPWVLILTVISFIAARHLNAQELGDDIAVGLGVPLTKSRVFMLLLSTALIGGAVAFAGGIGFVGLMAPHISRRLVGSLYGALLPVAAIVGAILVLAADLIGRTIFTPLEIPAGVFTSAIGAPYFIYLLYKSRNS
>NZ_CP053972.1|WP_000925213.1|3046505_3047510_+|iron-ABC-transporter-permease
MLLKTNRAKGIGLFVGIIAVVICIWGSIIFGYTNTSWKLALDAFFHFNGSNEHIIIQNVRLPRALIAASVGASLAIAGCLMQTLTKNPLASPDFIGLNSGAAFFIVVAIVIFSVTSLSAFTWIAFLGAAVAAVLVFASSSLGKEGTTPLKLTLAGVAISALFSSLTQGLLVLNEKALEEVLFWLAGSVQGRKLEILQSVFPYLLIGWIASLIMAGKVNTLMMGEDVAKGLGQRTILMKSFVLLIIVLLSGGSVAVAGPIGFIGIITPHFARFLVGVDHRWRVPYSGLLGAILLILADIAARYVIMPQEVPVGVMTAFIGAPFFIYIARKRGLSK
>NZ_CP053972.1|WP_000893348.1|3058582_3060286_+|EAL-domain-containing-protein
MLEQRGHALYDSSLRDLKLALDESSIVAITDRKGLITYVNDKFCEISKYKREELIGKDHRILNSGHHPKTFFQNLWKRILNGKVWTGEIRNRAKDGTYYWVKTTIVPFLNEKGEPYQFIAIRNDISSRKEAEHRLRLSESRYRELAYHDALTSLPNRLQLITTVNKLIADKKEFGMIYFDLDRFKLVNDTLGHMIGDLLLSEVASRLHYVLGEKDVLARLGGDEFVLLTKNHRQDDMSQLATSVLSCFQAPFMLEGHEVYISASLGLCSYPQDGLDVETLLKNSDLAMYSAKEQGRNAACFFTDELRAKINRRMKVEFALQKAIRDEELDVALQPIIDLKTKRYSGIEALVRCMTEDGPIAPSEFIPVAEESGLIIKLGDWVLEKSCRLFKTLPNYQEGLKLSVNLSIQQLMQKRFILSVRSILKRTGFPPNRLILEITESIAVRHFDYIIATLQELRNMGVLIALDDFGTGYSSLYYLKQLPLDIVKIDRNFIREFHYDHAQPERTIVKSVIEIAHSLNLAVVAEGVETVEQESLLQSMSCDYVQGFYYAKPLSVGELKEKLITDF
>NZ_CP053972.1|WP_000448446.1|3060317_3061715_-|amino-acid-permease
METKKWGLWVLTAFVIGNMVGGGVFMLPANLAQVSGPMGSTLAWSITGLGVFMIALVFGNLAIRKPELKAGPQSYAQAMFPSKKAGKVAGYSMAWGYWAANWAATASVIISFAGYLSTFFPVLQSKQILFSINGFSLELGKGLTFLVCSLMLWGIQYILSQNIDRAGNMNLLATIAKIIGFTMFIVITLFIFNASNFGDGQTFMNEAGQSISLGGQINSAAIATLWAFIGIESAVMLSNRAKSQRDVKKATIFGLIIALLIYMSITLLTMGALPQDALKESQKPLVDALNLAIGNKGAYIMALLALISLFGSTVGWIVVSSEVPYQAAKNGLFPKFFGKTNKKGSPSKSLLITNVMTQIFLFSTISGTVSEAYSFAIVVATLAYLIPYLVSTLYQFKLVITGETYDIMPGSRIKDGIITTLAFVYSIWVIKTGTADLKTFFLGIGLFVLGLILYPVLMKDSQKTD
>NZ_CP053972.1|WP_000987242.1|3062167_3062878_+|trehalose-operon-repressor
MMSKYEQIYTEISKSIDNKQLKEGCKIPSETELMKQYEASRGTVRKAVDLLQERGYVQKIHGKGVFVLKRKNIEFNFGGIVSFQEENERLGRHCITEVVEMDKEKATKEIAKLLNVKEKTEIDHIKRVRNIDGEKVILDINHFVSEFIPGLTKEIATASIYKYIEKELGLHISYSQRVIEVQPCTEDDRKYLDLNGTDYVVVVKNFTHLYDGSQFEYTESRHRLDIFHFSDVARRK
>NZ_CP053972.1|WP_000513939.1|3063020_3064448_+|PTS-system-trehalose-specific-EIIBC-component
MGKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNAGIFQVVIGPGDVDRVYAELITLAGMEESTVADVKDSGNQKLNPAQKFVKIFSDVFMPILPAIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDLINMMANTAFVFLPALVGWSATKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLEGQKIEYFNILGLFQIEKVGYQGQILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTVGLVGVYETVPVVGAVLFGALYAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQGSAALAMFWISKNQNDKSMASTSAISAYFGITEPAMFGVNLRNKFPFYAAIIGSAVAAIFITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK
>NZ_CP053972.1|WP_000656109.1|3064461_3066123_+|alpha,alpha-phosphotrehalase
MKDWHKSVVYQIYPKSFNSYYNKETGDIKGVTEKLDYLKELGVDYIWLTPIYQSPQNDNGYDVSDYYSIDPSYGTMEEFEELLAEAKVRNIEIMLDIVVNHSSTEHKWFKEAKEDKNSPYRNYYIWRDEKNNWQSKFGGSAWKYDEKTEQYYLHLFDETQADLNWENEQLREEVYDMMRFWLDKGVTGFRLDVINLISKDQCFLNDEGNTATSDGRKYYTDGPRVHEYLQEMNRKVFAGKDVITVGEMSSTTIDNCIKYSNPERNELSMTFSFHHLKVDYPNGDKWTKAEFDFIKLKEIMSNWQIEMQKGGGWNALFWCNHDQPRIVSRFGDDRKYRNESAKMLATAMHMLQGTPYIYQGEEIGMTNPKFESIEQYRDVESLNIYDIKREEGLSKEEIIGILKQKSRDNSRTPMQWNEEMNSGFTTSTPWISVAENFTEINVEKALEDKESVFYHYKKLIELRKTYDVITEGEYAILDKNDPKIWAYTRTTESEVLLVINNFYGEEITYSVPAHVQLDGMKQEVLLSNYKDASKDIAKLNLRPYESIVYRYTK
>NZ_CP053972.1|WP_000185806.1|3067260_3068367_-|GerAB/ArcD/ProY-family-transporter
MTNTQSKISLVQLTFFVIQCQIGVGILSLPNRLHPIAKGGGWISVLIAGLATQLIILLMWFLLRRFPDANMYEIACMMFGNKFGKLLGFSYVFYFTLIGMTVMLNACTVIKIWILQATPWYAILLLFTIACCYVAYNTFKVIVRFYVMASILILPMALLIGLGLSRADFSYIFPITEAGWWNIIKASKETITAMYGFEIFLIAFPKVNGTAVAKLKAISIANGFVTLFYAFTVWICFIVFSPKQVELIPEPVAYLLRSLHIGIVDRTDLIFIPIWMITVVASIASCYAAASIGIGHIFNLANHKKSVPIVGVISFSIALFIDTPEELKLIANFTDKFTYIFIIVLPFLFLLYSLLRNKKGAPYAQKNS
>NZ_CP053972.1|WP_000193671.1|3068347_3069850_-|spore-germination-protein
MTQQEEQQKSKNQKHMFPSLPENINYIENKLCHSDDIKKLDIPFQNGKGIILYIESLADPNLIHQLALEPLLTRSDLSLDKAFSTLNMKKETNLNYGVQLLLQGKSLYFHEHVESFCTFETALSLKRAITEPDNEGIVRGPHTGFVEDLATNLASIRKLIKSPNVVVKYFTLGEEMHTKVAITYIQNIANDDLVAEVKRRLEMIKTDALMPPGYIQEFIEDTSFSPFPQQLNTERPDRTAANLMEGRVAILSDGDPTALIVPVTLFAFYQSPDDYNNRWIVGSFVRMIRLVSFLIAFLLPAIYIATVAFHPDVLPLELVYTIKASLEQVPLPPIFEALLMELIFELLREAGIRLPSRVGQTIGIVGGLVIGDAIVKAGLVSYTMIIVVALTAIASFLVPSNDMSSAVRILRFPLMVLAAIFGYVGISFGIIITFVHLCQLHSFHTPYLSPLAPMRIKDMKDSFVRFPIWSFWERPHDSKPKKMQRQHVTREDENGDKHAK
>NZ_CP053972.1|WP_000401661.1|3070038_3070860_+|phosphotransferase
MEIAVERVFTKEILRRAAKAFHVTVEEKPLGDFENYIFKAKGDNDEDYVLRLTHSSHRSKKEVEAELDFLRYVAEHGAKVAGPLNSTSQNLVEEIGAEDSTFFFASLFTYAKGEQVKGEGSPYWGDDYFEAWGKAIGQLHRLTMSYPKTDYRDTWEEDESGIVNELEDDQVKKIAAVLMDEIKALPVERETFGLMHGDIHPGNFHYDGKELTIFDFDDAAYNYFIHDLAMVLYYSILFTPWTAEEKTDFARKQLQVLRKGYEHEHRLADSWYE
>NZ_CP053972.1|WP_003309076.1|3070866_3071010_+|hypothetical-protein
MFLRLRDVGLYGTLQKKFKGKGMPDNFRELSEELYERIIKREAIVNI
>NZ_CP053972.1|WP_000387173.1|3071169_3072630_+|alanine:cation-symporter-family-protein
MEAFVNWLNNIVWSPALVYLCLGVGLYFSIRTRFLQVRHVGEMVKLTFQGEKSEAGVSSFQALALSLSGRVGTGNIAGVATAVAFGGPGAVFWMWAVAFLGAGSAYIESTLAQIYKTKHQGQFRGGPAYYIEKGLGVKWYALVFVAATILATGLLLPGVQANSIAVSLETAFGINTTVSGVLLVVVLAIIIFGGVKRIVNVAQVVVPFMAVGYILVACVIVAMNIEKLPEAFMLIIRSAFALEAAFGGIIGLAISWGVKRGIYSNEAGQGTGPHAAAAAEVSHPAKQGLVQAFSVYIDTLFVCSATAFMMIITGMYNVFDASGKNFIVNKLNGAQPGPGYTQAAVESVFPGFGNGFVAISLLFFAFTTIMAYYYIAETNIAYLNRDKDRPWLSIVLKFVFLGAVFYGCIKTAATAWALGDIGVGIMAWVNIIAILLLQKPALVALKDYEKQKKEGKDPVFDPQPLGIKNADFWEHEYGKDKKEEVS

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053972_3	3.1\|3057809\|26\|NZ_CP053972\|CRISPRCasFinder	3057809-3057834	26	NZ_CP045855	Agrobacterium sp. MA01 plasmid punnamed1, complete sequence	103187-103212	5	0.808
NZ_CP053972_2	2.1\|2146102\|31\|NZ_CP053972\|CRISPRCasFinder	2146102-2146132	31	JX238501	Bacillus phage phiAGATE, complete genome	124559-124589	8	0.742
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_CP014851	Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence	100650-100683	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812210	Flavobacterium phage vB_FspS_hemulen9-1, complete genome	22854-22887	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812215	Flavobacterium phage vB_FspS_lillamy9-4, complete genome	22191-22224	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812216	Flavobacterium phage vB_FspS_lillamy9-5, complete genome	22191-22224	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NC_048835	Flavobacterium phage vB_FspS_lillamy9-1, complete genome	22191-22224	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812213	Flavobacterium phage vB_FspS_lillamy9-2, complete genome	22191-22224	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812230	Flavobacterium phage vB_FspS_sniff9-2, complete genome	21831-21864	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812209	Flavobacterium phage vB_FspS_hemulen6-2, complete genome	22983-23016	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812218	Flavobacterium phage vB_FspS_lillamy9-7, complete genome	21454-21487	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812233	Flavobacterium phage vB_FspS_snork9-1, complete genome	22007-22040	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812219	Flavobacterium phage vB_FspS_morran9-1, complete genome	22308-22341	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812217	Flavobacterium phage vB_FspS_lillamy9-6, complete genome	21930-21963	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NC_048840	Flavobacterium phage vB_FspS_snork6-1, complete genome	22137-22170	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NC_048839	Flavobacterium phage vB_FspS_sniff9-1, complete genome	22057-22090	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NC_048842	Flavobacterium phage vB_FspS_stinky9-1, complete genome	21673-21706	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812232	Flavobacterium phage vB_FspS_snork6-2, complete genome	21655-21688	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	MN812208	Flavobacterium phage vB_FspS_hemulen6-1, complete genome	22983-23016	8	0.765
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	47181-47214	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	47565-47598	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	47949-47982	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	48333-48366	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	48717-48750	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	49101-49134	11	0.676
NZ_CP053972_2	2.2\|2146156\|34\|NZ_CP053972\|CRISPRCasFinder	2146156-2146189	34	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	49485-49518	11	0.676

1. spacer 3.1|3057809|26|NZ_CP053972|CRISPRCasFinder matches to NZ_CP045855 (Agrobacterium sp. MA01 plasmid punnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

tggtgggcacaatcataacggcggac	CRISPR spacer
atctgggcacaatcatagcggcggaa	Protospacer
   **************.*******

2. spacer 2.1|2146102|31|NZ_CP053972|CRISPRCasFinder matches to JX238501 (Bacillus phage phiAGATE, complete genome) position: , mismatch: 8, identity: 0.742

ttcttcttttttgtcactagttgaaccgctt	CRISPR spacer
ctaaccttttttgccactagttaaaccgccc	Protospacer
.*  .********.********.******..

3. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_CP014851 (Bacillus thuringiensis strain HD12 plasmid pHD120112, complete sequence) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tttatcttcttttttattttctggtttattttcc	Protospacer
.**.****** ****************  * ..*

4. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812210 (Flavobacterium phage vB_FspS_hemulen9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

5. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812215 (Flavobacterium phage vB_FspS_lillamy9-4, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

6. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812216 (Flavobacterium phage vB_FspS_lillamy9-5, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

7. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NC_048835 (Flavobacterium phage vB_FspS_lillamy9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

8. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812213 (Flavobacterium phage vB_FspS_lillamy9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

9. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812230 (Flavobacterium phage vB_FspS_sniff9-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

10. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812209 (Flavobacterium phage vB_FspS_hemulen6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

11. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812218 (Flavobacterium phage vB_FspS_lillamy9-7, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

12. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812233 (Flavobacterium phage vB_FspS_snork9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

13. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812219 (Flavobacterium phage vB_FspS_morran9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

14. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812217 (Flavobacterium phage vB_FspS_lillamy9-6, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

15. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NC_048840 (Flavobacterium phage vB_FspS_snork6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

16. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NC_048839 (Flavobacterium phage vB_FspS_sniff9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

17. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NC_048842 (Flavobacterium phage vB_FspS_stinky9-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

18. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812232 (Flavobacterium phage vB_FspS_snork6-2, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

19. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to MN812208 (Flavobacterium phage vB_FspS_hemulen6-1, complete genome) position: , mismatch: 8, identity: 0.765

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
ttcggcttctgttttattttctggttgcgatatt	Protospacer
.*.* ********************* **   *.

20. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

21. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

22. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

23. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

24. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

25. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

26. spacer 2.2|2146156|34|NZ_CP053972|CRISPRCasFinder matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.676

cttgtcttctgttttattttctggtttcgtgctc	CRISPR spacer
tatgtcttctgtttttgtttctggttccccagct	Protospacer
. *************  *********.* .. ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

458662 : 469011

Bacillus_phage(100.0%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000730121.1\|458662_459646_+	helix-turn-helix domain-containing protein	A0A0S2MVF4	Bacillus_phage	1.1e-134	74.9
WP_003262705.1\|459671_460292_-	replication-relaxation family protein	H0USY2	Bacillus_phage	1.1e-111	95.6
WP_014895314.1\|460233_461415_-	cell division protein FtsK	H0USY1	Bacillus_phage	1.2e-217	95.7
WP_000170774.1\|461530_461713_-	hypothetical protein	Q2I8E2	Bacillus_phage	1.0e-22	90.0
WP_001256514.1\|461709_462027_-	hypothetical protein	H0USY0	Bacillus_phage	3.2e-51	97.1
WP_001009469.1\|462232_462436_+	helix-turn-helix transcriptional regulator	Q2I8E4	Bacillus_phage	2.2e-13	56.1
WP_001171598.1\|462440_463025_+	type IV secretory system conjugative DNA transfer family protein	A0A288WFT6	Bacillus_phage	1.1e-81	74.3
WP_000405770.1\|463414_464119_-	N-acetylmuramoyl-L-alanine amidase	W8CZ46	Bacillus_phage	2.9e-113	84.4
WP_000392441.1\|464118_464349_-\|bacteriocin	bacteriocin biosynthesis protein	A0A1B1P7Q9	Bacillus_phage	1.6e-28	87.8
WP_003261708.1\|464415_464640_-	hemolysin XhlA family protein	A0A1B1P780	Bacillus_phage	5.9e-20	75.0
WP_014895315.1\|464739_469011_-	hypothetical protein	A0A0A0RPU4	Bacillus_phage	4.2e-138	37.2

DBSCAN-SWA_2

473451 : 499192

Bacillus_phage(60.0%)

capsid,terminase,integrase

attL 462967:462985|attR 510138:510156

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
462967:462985	attL	NA	NA	NA	NA
WP_014895319.1\|473451_474642_-\|capsid	phage major capsid protein	A0A1B1IV93	uncultured_Mediterranean_phage	2.3e-33	28.2
WP_000917220.1\|474657_475506_-	hypothetical protein	NA	NA	NA	NA
WP_000791086.1\|475589_475844_-	hypothetical protein	A0A1B1P7N4	Bacillus_phage	6.5e-39	86.6
WP_000668389.1\|475843_476104_-	DUF2829 domain-containing protein	S5MAK7	Bacillus_phage	4.3e-30	70.6
WP_003269488.1\|476103_476355_-	DUF2829 domain-containing protein	A0A1B0VMG3	Pseudomonas_phage	3.3e-19	54.2
WP_000366285.1\|476354_476630_-	DUF2829 domain-containing protein	A0A0A7AQX0	Bacillus_phage	9.2e-23	59.0
WP_000467413.1\|476630_478754_-	hypothetical protein	NA	NA	NA	NA
WP_000124815.1\|478811_479012_-	hypothetical protein	NA	NA	NA	NA
WP_000222862.1\|479025_479256_-	hypothetical protein	NA	NA	NA	NA
WP_003259447.1\|479252_480716_-\|terminase	phage terminase large subunit	U5PVG8	Bacillus_phage	9.8e-196	68.9
WP_000515245.1\|480681_481218_-	hypothetical protein	A5GYP7	Lactococcus_phage	9.5e-40	56.3
WP_003259446.1\|481260_481833_-	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	4.9e-42	48.1
WP_003309811.1\|481985_482168_-	hypothetical protein	NA	NA	NA	NA
WP_000248554.1\|482253_482409_-	BC1881 family protein	NA	NA	NA	NA
WP_000876114.1\|482693_482909_-	hypothetical protein	NA	NA	NA	NA
WP_001072816.1\|483270_483645_-	ArpU family transcriptional regulator	Q9ZXB9	Bacillus_phage	6.0e-17	40.7
WP_000164426.1\|484314_485112_-	phage antirepressor KilAC domain-containing protein	A0A1Q1PVZ8	Staphylococcus_phage	1.5e-73	52.1
WP_000520931.1\|485146_485329_-	hypothetical protein	A0A1B1P7L7	Bacillus_phage	2.9e-09	58.5
WP_000433162.1\|485507_485672_-	hypothetical protein	W8CYP0	Bacillus_phage	1.1e-12	66.7
WP_000973815.1\|485904_486639_-	sigma-70 family RNA polymerase sigma factor	C7DTL2	Bacillus_phage	2.1e-58	51.2
WP_000778925.1\|486622_487045_-	hypothetical protein	NA	NA	NA	NA
WP_000762586.1\|487054_487777_-	zinc-finger domain-containing protein	NA	NA	NA	NA
WP_000323349.1\|487766_488435_-	hypothetical protein	NA	NA	NA	NA
WP_000049838.1\|488450_488876_-	DUF1064 domain-containing protein	A0A2P1JTY5	Anoxybacillus_phage	4.1e-30	51.9
WP_000049348.1\|488888_489368_-	YpiB family protein	NA	NA	NA	NA
WP_000611881.1\|489373_490006_-	ATP-binding protein	S6B1M2	Thermus_phage	2.7e-57	52.5
WP_000224585.1\|491154_491961_-	recombination protein RecT	S6AVW6	Thermus_phage	1.1e-95	67.1
WP_000543065.1\|491982_492918_-	YqaJ viral recombinase family protein	S6C475	Thermus_phage	2.2e-100	58.5
WP_000572113.1\|492996_493191_-	hypothetical protein	NA	NA	NA	NA
WP_000866208.1\|493183_493447_-	hypothetical protein	A0A2H4J4P5	uncultured_Caudovirales_phage	7.2e-17	52.5
WP_000167563.1\|493447_493750_-	hypothetical protein	H0USU0	Bacillus_phage	9.5e-29	66.7
WP_000788396.1\|493812_493968_-	hypothetical protein	I7J4K2	Bacillus_phage	4.1e-20	88.2
WP_000187073.1\|494027_494675_-	sigma-70 family RNA polymerase sigma factor	W8CYN8	Bacillus_phage	6.0e-105	89.3
WP_000549470.1\|494695_494884_-	helix-turn-helix transcriptional regulator	A0A0S2GLE9	Bacillus_phage	1.4e-17	74.2
WP_000819158.1\|494949_495156_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003259427.1\|495325_495670_+	helix-turn-helix transcriptional regulator	H0UST7	Bacillus_phage	1.4e-15	40.6
WP_001033745.1\|495666_495813_-	hypothetical protein	NA	NA	NA	NA
WP_000947503.1\|496072_497293_-	hypothetical protein	A0A0U3TNF6	Bacillus_phage	1.1e-112	50.9
WP_000237495.1\|498100_499192_+\|integrase	site-specific integrase	A0A0S2GLI2	Bacillus_phage	2.5e-164	79.8
510138:510156	attR	NA	NA	NA	NA

DBSCAN-SWA_3

614514 : 623771

Bacillus_phage(40.0%)

bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000413739.1\|614514_615135_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	8.2e-19	62.2
WP_000976234.1\|615225_616029_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_000031383.1\|616029_616572_-	DUF1700 domain-containing protein	NA	NA	NA	NA
WP_001102628.1\|616564_616888_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_000392443.1\|617259_617490_-\|bacteriocin	bacteriocin biosynthesis protein	A0A1B1P7Q9	Bacillus_phage	1.7e-25	77.6
WP_001051376.1\|617551_618394_-	M23 family metallopeptidase	A0A218KCJ1	Bacillus_phage	1.4e-32	47.7
WP_033795297.1\|618517_619504_-	lysozyme family protein	A0A223LKM8	Bacillus_phage	5.8e-35	43.3
WP_000464432.1\|619741_620128_-	hypothetical protein	A0A288WG73	Bacillus_phage	5.4e-45	68.3
WP_000900737.1\|620102_620267_-	hypothetical protein	NA	NA	NA	NA
WP_000511422.1\|620536_621424_-	DnaD domain protein	A0A2H4J394	uncultured_Caudovirales_phage	1.0e-94	64.6
WP_001189066.1\|621576_621771_-	hypothetical protein	A0A2H4J4V8	uncultured_Caudovirales_phage	2.6e-16	72.6
WP_000531298.1\|621782_622541_-	phage regulatory protein	A0A2H4JBC7	uncultured_Caudovirales_phage	4.1e-97	70.2
WP_000283161.1\|622737_622950_-	hypothetical protein	A6M975	Geobacillus_virus	1.3e-11	63.0
WP_000708856.1\|623111_623771_+	helix-turn-helix domain-containing protein	A0A2H4J441	uncultured_Caudovirales_phage	8.7e-35	41.0

DBSCAN-SWA_4

678325 : 797099

106

Bacillus_phage(47.06%)

holin,terminase,bacteriocin,capsid,integrase,protease,tRNA,portal,tail,head,coat

attL 752835:752851|attR 769192:769208

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000878483.1\|678325_678682_-\|holin	CidA/LrgA family holin-like protein	NA	NA	NA	NA
WP_000454959.1\|678715_680149_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_000006462.1\|680335_680527_-	hypothetical protein	NA	NA	NA	NA
WP_000008148.1\|681040_682756_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-09	47.2
WP_001244684.1\|682955_683936_-	phosphatidylinositol diacylglycerol-lyase	NA	NA	NA	NA
WP_000689209.1\|684115_685957_-	peptidase	NA	NA	NA	NA
WP_000771008.1\|686251_687049_+	LysM peptidoglycan-binding domain-containing protein	A0A172JHR8	Bacillus_phage	2.8e-35	39.4
WP_000272409.1\|687314_688652_+	NAD(P)-binding protein	NA	NA	NA	NA
WP_000791034.1\|689156_691076_+	LTA synthase family protein	W6LM83	Streptococcus_phage	4.4e-95	36.8
WP_001235297.1\|691173_693957_-	dynamin family protein	NA	NA	NA	NA
WP_000461138.1\|694461_694647_+	hypothetical protein	NA	NA	NA	NA
WP_000516485.1\|694924_696889_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.5e-61	29.7
WP_000195994.1\|696897_699576_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	1.8e-33	24.5
WP_001288799.1\|699756_700299_-\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_000870460.1\|700425_700857_-	YlbF family regulator	NA	NA	NA	NA
WP_001005392.1\|700860_702390_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_000190155.1\|702818_703685_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_000625417.1\|703671_705429_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_003309838.1\|705654_706614_-	membrane dipeptidase	NA	NA	NA	NA
WP_000404341.1\|706636_706897_-	stage V sporulation protein SpoVS	J9PTX7	Bacillus_phage	8.4e-10	43.8
WP_001221092.1\|707046_707841_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_000099770.1\|707999_709565_-	ribonuclease Y	NA	NA	NA	NA
WP_001283853.1\|710048_711080_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	3.2e-137	71.5
WP_000990684.1\|711224_712463_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_001052967.1\|712483_713062_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000137465.1\|713127_714042_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000574107.1\|714063_714849_-	DUF3388 domain-containing protein	NA	NA	NA	NA
WP_000114444.1\|714987_715236_-	DUF3243 domain-containing protein	NA	NA	NA	NA
WP_000759625.1\|715311_716025_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000411971.1\|716125_717412_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	3.8e-10	28.4
WP_000772416.1\|717412_718687_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	1.6e-56	30.3
WP_000008857.1\|718896_719856_-	ABC transporter permease	NA	NA	NA	NA
WP_001085255.1\|719856_720915_-	ABC transporter permease	NA	NA	NA	NA
WP_000456929.1\|720907_722440_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-11	25.9
WP_000725767.1\|722557_723634_-	BMP family protein	A0A0A7DN02	Lactobacillus_phage	5.6e-47	33.6
WP_000114182.1\|723726_724452_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_001118795.1\|724989_727371_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.0e-89	51.4
WP_000605020.1\|727583_727787_-	YlzJ-like family protein	NA	NA	NA	NA
WP_000139825.1\|727783_728533_-	translocation-enhancing protein TepA	NA	NA	NA	NA
WP_000823089.1\|728637_730308_-	ribonuclease J	NA	NA	NA	NA
WP_000564763.1\|731234_732113_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_000692456.1\|732124_733357_-	aspartate kinase	NA	NA	NA	NA
WP_000414846.1\|733380_734427_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_085960240.1\|734577_734814_-	dipicolinate synthase	NA	NA	NA	NA
WP_002000636.1\|735016_736723_+	hypothetical protein	NA	NA	NA	NA
WP_000050864.1\|736737_737226_+	hypothetical protein	NA	NA	NA	NA
WP_000722940.1\|737909_738416_+	hypothetical protein	NA	NA	NA	NA
WP_000540632.1\|738617_739427_-	N-acetylmuramoyl-L-alanine amidase	D2XR33	Bacillus_phage	2.0e-134	83.3
WP_001261076.1\|739426_739663_-\|bacteriocin	bacteriocin biosynthesis protein	A0A2H4JGN9	uncultured_Caudovirales_phage	1.7e-25	100.0
WP_001075307.1\|739693_740059_-	hypothetical protein	A0A0S2MVE0	Bacillus_phage	2.8e-43	69.7
WP_001260218.1\|740080_744400_-\|tail	phage tail protein	A0A0S2MVB4	Bacillus_phage	0.0e+00	62.6
WP_000094137.1\|744396_745866_-\|tail	phage tail family protein	A0A0S2MV63	Bacillus_phage	2.3e-229	78.3
WP_000415912.1\|749766_750129_-	hypothetical protein	A0A2H4JAG8	uncultured_Caudovirales_phage	2.4e-42	70.8
WP_001004907.1\|750133_750721_-\|tail	phage tail protein	A0A2H4JDV4	uncultured_Caudovirales_phage	5.1e-87	82.1
WP_000176454.1\|750721_751057_-	hypothetical protein	D2XR22	Bacillus_phage	2.0e-51	90.8
WP_000997535.1\|751053_751398_-	HK97 gp10 family phage protein	A0A2H4JAH8	uncultured_Caudovirales_phage	6.3e-45	79.6
WP_003310446.1\|751399_751750_-\|head	phage head closure protein	D2XR20	Bacillus_phage	2.1e-51	86.2
WP_001243202.1\|751751_752048_-	hypothetical protein	D2XR19	Bacillus_phage	2.3e-43	90.6
WP_000152777.1\|752060_753224_-\|capsid	phage major capsid protein	A0A2H4JH29	uncultured_Caudovirales_phage	2.7e-209	95.9
752835:752851	attL	NA	NA	NA	NA
WP_000216398.1\|753243_754017_-\|protease	Clp protease ClpP	R9TLM7	Paenibacillus_phage	7.0e-60	54.1
WP_043333521.1\|754000_755107_-\|portal	phage portal protein	A0A2H4JAJ1	uncultured_Caudovirales_phage	3.1e-186	89.9
WP_000635288.1\|755172_756828_-\|terminase	terminase large subunit	A0A2H4JI41	uncultured_Caudovirales_phage	6.1e-311	95.5
WP_000763336.1\|756824_757181_-	hypothetical protein	A0A2H4JBV9	uncultured_Caudovirales_phage	3.6e-59	100.0
WP_001209624.1\|757331_757667_-	HNH endonuclease	D2XR61	Bacillus_phage	4.7e-53	91.0
WP_000877970.1\|757632_757905_-	hypothetical protein	A0A1B1P7D2	Bacillus_phage	1.8e-07	47.8
WP_000778987.1\|757901_758123_-	hypothetical protein	B5LPQ8	Bacillus_virus	1.9e-23	75.7
WP_001099642.1\|758401_758842_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_000434817.1\|760366_760567_+	cold-shock protein	Q9AZD3	Lactococcus_phage	6.3e-21	72.7
WP_001012125.1\|760689_761232_-\|integrase	site-specific integrase	W8CYP1	Bacillus_phage	8.6e-89	91.7
WP_000192854.1\|761231_761696_-	ArpU family transcriptional regulator	D2XR57	Bacillus_phage	1.1e-73	92.2
WP_000140896.1\|761951_762116_+	hypothetical protein	A0A288WGN0	Bacillus_phage	4.5e-09	53.7
WP_000032820.1\|763284_764601_+	collagen-like protein	A0A285PWR0	Cedratvirus	4.4e-38	62.6
WP_000512856.1\|765641_765833_-	DUF3954 domain-containing protein	D2XR48	Bacillus_phage	6.4e-15	63.5
WP_001126004.1\|765906_766269_-	hypothetical protein	D2XR47	Bacillus_phage	1.6e-54	88.3
WP_000926798.1\|766243_766432_-	hypothetical protein	D2XR45	Bacillus_phage	9.7e-16	85.5
WP_000063910.1\|766434_767757_-	replicative DNA helicase	D2XR44	Bacillus_phage	5.1e-236	95.0
WP_000312141.1\|767753_768704_-	DnaD domain protein	D2XR43	Bacillus_phage	7.7e-85	61.2
WP_000998369.1\|768983_769268_-	hypothetical protein	D2XR42	Bacillus_phage	1.9e-23	55.3
769192:769208	attR	NA	NA	NA	NA
WP_000782004.1\|769451_769751_+	hypothetical protein	NA	NA	NA	NA
WP_000354295.1\|769747_769963_-	hypothetical protein	A0A0S2GLC6	Bacillus_phage	1.0e-24	69.0
WP_000215309.1\|770146_770368_-	hypothetical protein	NA	NA	NA	NA
WP_000537277.1\|770381_770969_-	hypothetical protein	D2XR41	Bacillus_phage	2.2e-74	69.7
WP_001141265.1\|771059_771308_-	hypothetical protein	NA	NA	NA	NA
WP_001060851.1\|771342_771534_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000900757.1\|771707_772145_+	helix-turn-helix domain-containing protein	A0A2P1JU09	Anoxybacillus_phage	7.5e-35	55.2
WP_000351864.1\|772158_772593_+	ImmA/IrrE family metallo-endopeptidase	D2XR38	Bacillus_phage	5.1e-60	79.0
WP_001046154.1\|772748_773552_+	hypothetical protein	NA	NA	NA	NA
WP_000844788.1\|773824_775372_+	recombinase family protein	I3VYZ3	Thermoanaerobacterium_phage	1.8e-144	54.0
WP_000954735.1\|775826_776729_-	dipicolinic acid synthetase subunit A	NA	NA	NA	NA
WP_001239759.1\|776899_777151_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_000593001.1\|777286_778528_-	insulinase family protein	G3MBJ8	Bacillus_virus	4.4e-56	34.5
WP_000868223.1\|778615_779515_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_000076743.1\|779667_781806_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_001229392.1\|781966_782236_-	30S ribosomal protein S15	NA	NA	NA	NA
WP_000766703.1\|782336_783308_-	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SD03	Indivirus	2.1e-05	31.8
WP_000399363.1\|783351_784275_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_000776437.1\|784361_784718_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_000634349.1\|784733_785015_-	DUF503 family protein	NA	NA	NA	NA
WP_000036346.1\|785011_787078_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.9e-19	25.9
WP_001286522.1\|787082_787394_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_000071123.1\|787394_787667_-	YlxR family protein	NA	NA	NA	NA
WP_000102611.1\|787678_788785_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_000359095.1\|788802_789273_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_000059996.1\|789606_793908_-	PolC-type DNA polymerase III	A0A0A8WJ41	Clostridium_phage	4.1e-24	39.6
WP_000814295.1\|794032_795733_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_001090241.1\|795842_797099_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA

DBSCAN-SWA_5

1361230 : 1418870

Klosneuvirus(22.22%)

tRNA,coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000125365.1\|1361230_1362370_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	1.1e-82	42.3
WP_000354035.1\|1362382_1363435_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_000138162.1\|1363454_1363655_-	DUF2905 domain-containing protein	NA	NA	NA	NA
WP_000344464.1\|1363651_1364653_-	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	6.8e-07	26.3
WP_000464512.1\|1364658_1365276_-	Holliday junction DNA helicase RuvA	NA	NA	NA	NA
WP_000823610.1\|1365464_1366409_+	iron-hydroxamate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000871202.1\|1366420_1366951_-	BofC C-terminal domain-containing protein	NA	NA	NA	NA
WP_000874881.1\|1367432_1367813_+	hypothetical protein	NA	NA	NA	NA
WP_001093530.1\|1367846_1368494_-	YhcN/YlaJ family sporulation lipoprotein	NA	NA	NA	NA
WP_003261053.1\|1368672_1370751_-\|coat	spore coat assembly protein ExsA	NA	NA	NA	NA
WP_000025282.1\|1370977_1372084_-	quinolinate synthase NadA	NA	NA	NA	NA
WP_001092241.1\|1372114_1372948_-	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_001138541.1\|1372967_1374497_-	L-aspartate oxidase	NA	NA	NA	NA
WP_000973781.1\|1374649_1375792_+	IscS subfamily cysteine desulfurase	A0A1X7QGF3	Faustovirus	8.5e-30	29.2
WP_000812273.1\|1375791_1376334_+	transcription repressor NadR	NA	NA	NA	NA
WP_000511662.1\|1376415_1377063_+	MOSC domain-containing protein	NA	NA	NA	NA
WP_000796367.1\|1377254_1377725_+	hypothetical protein	NA	NA	NA	NA
WP_000621701.1\|1377902_1378754_-	prephenate dehydratase	NA	NA	NA	NA
WP_001026364.1\|1378850_1380761_-	ABC transporter permease	NA	NA	NA	NA
WP_001011408.1\|1380810_1382733_-	ABC transporter permease	NA	NA	NA	NA
WP_000114530.1\|1382707_1383484_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.6e-19	31.0
WP_000865417.1\|1383577_1384660_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_002082113.1\|1384649_1385357_-	response regulator transcription factor	NA	NA	NA	NA
WP_000497121.1\|1385545_1386832_-	GTPase ObgE	NA	NA	NA	NA
WP_001003585.1\|1386836_1387379_-	Spo0B domain-containing protein	NA	NA	NA	NA
WP_000944957.1\|1387442_1387733_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_002082112.1\|1387736_1388081_-\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_000270907.1\|1388092_1388401_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_000855475.1\|1388566_1389958_-	Rne/Rng family ribonuclease	NA	NA	NA	NA
WP_000599047.1\|1390025_1390886_-\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_000797477.1\|1390878_1391625_-	stage IV sporulation protein SpoIVFA	NA	NA	NA	NA
WP_000503309.1\|1391758_1392556_-	septum site-determining protein MinD	NA	NA	NA	NA
WP_000391514.1\|1392558_1393245_-	septum site-determining protein MinC	NA	NA	NA	NA
WP_000975762.1\|1393280_1393826_-	rod shape-determining protein MreD	NA	NA	NA	NA
WP_001135484.1\|1393840_1394692_-	rod shape-determining protein MreC	NA	NA	NA	NA
WP_000466736.1\|1394733_1395753_-	rod shape-determining protein MreB	NA	NA	NA	NA
WP_001013396.1\|1395910_1396588_-	DNA repair protein RadC	NA	NA	NA	NA
WP_000720491.1\|1396634_1397210_-	septum formation inhibitor Maf	NA	NA	NA	NA
WP_000360995.1\|1397442_1398393_-	hypothetical protein	NA	NA	NA	NA
WP_000582072.1\|1398557_1399859_-	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_000072243.1\|1399952_1402598_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.5e-165	43.0
WP_000350651.1\|1403081_1404107_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_003256548.1\|1404141_1405143_-	stage VI sporulation protein D	NA	NA	NA	NA
WP_000712938.1\|1405223_1406510_-	glutamate-1-semialdehyde 2,1-aminomutase	A0A1V0SKB7	Klosneuvirus	1.7e-05	34.1
WP_001087080.1\|1406509_1407499_-	porphobilinogen synthase	NA	NA	NA	NA
WP_000992324.1\|1407519_1408272_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_001226404.1\|1408274_1409204_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_000009002.1\|1409219_1410053_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_000547856.1\|1410070_1411405_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_000133913.1\|1411821_1412274_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_000359773.1\|1412276_1412693_+	organic hydroperoxide resistance protein	NA	NA	NA	NA
WP_000869118.1\|1412727_1413324_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA
WP_000097281.1\|1413320_1415651_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.3e-177	43.7
WP_000119171.1\|1415833_1417504_-\|protease	ATP-dependent protease LonB	E3T4F6	Cafeteria_roenbergensis_virus	8.7e-15	33.5
WP_000472289.1\|1417610_1418870_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.0e-148	66.3

DBSCAN-SWA_6

1466773 : 1474461

Staphylococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000221121.1\|1466773_1467697_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-45	43.5
WP_000247674.1\|1467822_1468758_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.4e-24	26.6
WP_000018046.1\|1468759_1469452_-	response regulator transcription factor	B5LWA6	Feldmannia_species_virus	6.8e-06	26.9
WP_001293576.1\|1469622_1469796_+	hypothetical protein	NA	NA	NA	NA
WP_001014310.1\|1469796_1469991_+	YwbE family protein	NA	NA	NA	NA
WP_001255945.1\|1470030_1471230_-	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	6.1e-71	41.0
WP_000587818.1\|1471524_1471848_+	heme oxygenase	NA	NA	NA	NA
WP_002162479.1\|1471920_1472685_-	class B sortase	NA	NA	NA	NA
WP_000403765.1\|1472717_1473488_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.7e-13	28.6
WP_001036830.1\|1473477_1474461_-	iron ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	4.2e-17	27.2

DBSCAN-SWA_7

2733580 : 2741956

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000625687.1\|2733580_2734888_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.1e-20	25.3
WP_001170545.1\|2734976_2735696_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	G8EYA2	Synechococcus_phage	4.0e-49	44.3
WP_000278823.1\|2735688_2735943_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_000666782.1\|2735939_2736623_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_000055594.1\|2736606_2738826_+	phosphoribosylformylglycinamidine synthase II	A6N228	Microbacterium_phage	3.3e-163	41.2
WP_000879034.1\|2738810_2740226_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	7.3e-55	35.0
WP_001262424.1\|2740331_2741372_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.5e-68	46.3
WP_000088579.1\|2741368_2741956_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	9.1e-28	37.4

DBSCAN-SWA_8

3080384 : 3088542

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114365429.1\|3080384_3081371_-	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	4.2e-17	29.4
WP_000085772.1\|3081446_3081968_+	dihydrofolate reductase	NA	NA	NA	NA
WP_000822548.1\|3082133_3083525_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.6e-33	29.8
WP_000565487.1\|3083536_3084214_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.9e-33	35.6
WP_000738865.1\|3084389_3085637_+	hypothetical protein	NA	NA	NA	NA
WP_000277057.1\|3085770_3086301_+	DUF4352 domain-containing protein	A0A0S2MVG4	Bacillus_phage	8.6e-17	34.3
WP_000831286.1\|3086313_3086658_+	DUF4064 domain-containing protein	A0A0S2MVJ2	Bacillus_phage	8.5e-42	78.1
WP_000487912.1\|3087090_3088542_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	1.7e-139	54.2

DBSCAN-SWA_9

4271673 : 4280528

Bacillus_phage(71.43%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000755524.1\|4271673_4272966_+	C40 family peptidase	A0A1V0DZX6	Clostridioides_phage	2.9e-10	30.3
WP_001194308.1\|4273065_4273830_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_000453881.1\|4274066_4275827_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.5e-275	99.2
WP_000612415.1\|4275867_4276545_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.0e-123	99.6
WP_001231613.1\|4276541_4277615_+	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	3.7e-192	99.7
WP_000818985.1\|4277842_4278562_+	3-ketoacyl-ACP reductase	W8CYX9	Bacillus_phage	5.9e-61	100.0
WP_002083265.1\|4279274_4279529_+	hypothetical protein	W8CYN0	Bacillus_phage	4.5e-40	100.0
WP_001258546.1\|4279658_4280528_+	aminoglycoside 6-adenylyltransferase	E4ZFP8	Streptococcus_phage	5.6e-66	44.6

DBSCAN-SWA_10

4466912 : 4473822

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000427801.1\|4466912_4467188_+	stage V sporulation protein S	J9PTX7	Bacillus_phage	2.9e-08	41.2
WP_000478848.1\|4467386_4467650_+	hypothetical protein	A0A218KBU4	Bacillus_phage	3.4e-06	38.9
WP_001012095.1\|4467681_4467855_+	hypothetical protein	NA	NA	NA	NA
WP_000541075.1\|4468296_4468644_-	YolD-like family protein	A0A2H4JEH6	uncultured_Caudovirales_phage	2.5e-09	27.1
WP_000109862.1\|4468830_4469904_+	tetratricopeptide repeat protein	A0A2H4J8G3	uncultured_Caudovirales_phage	6.9e-74	42.0
WP_000709202.1\|4469900_4470026_+	hypothetical protein	NA	NA	NA	NA
WP_000499713.1\|4470345_4471173_-	hypothetical protein	NA	NA	NA	NA
WP_000165966.1\|4471282_4471930_+	HD domain-containing protein	S4W232	Pandoravirus	2.5e-10	28.3
WP_000783172.1\|4471926_4473822_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2H4UUX5	Bodo_saltans_virus	2.8e-46	25.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

5. NZ_CP053970

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053970_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053970_1

6354-6814

Orphan

Consensus_repeat	Method
GATATCATTGAAGACGAAGATGA	CRISPRCasFinder

9 spacers

The CRISPR arrays of NZ_CP053970_1

>merge|NZ_CP053970|1|6354-6814|CRISPRCasFinder
GAATTAATTGATGAGGAAGAGGAAGAGTTCACTCATGAGCCGGAAGACGATGATGACGAAGAAGAGGAACTTATTGAAGATGAAGATGAGGAAGAAGAGGAAATAGAGGACGAAGATGAAGAGGAGGAAGACGAGGAACTTGAAGAAGACGAGGATGAAGATTTAGAAGACGAAGATGATGATTTCGAAGAGGAAGATGAAGAATTAGATGACGAGGATGAGGAAATAGAAGACGAAGATGAAGATTTGGATGACGAGGATGAAGATTCAGAAGACGAGGATGAGGAAATCCTAGACGAAGATGATGATGAGAGTGGTTTAGTAGACACGGATGATGAAGATGAAGACGAAGCTGATTCTGAAGAAGACGAGGACGAAGAATTAGATGATGAAGATGATGATTCAGAAGACGAAGCTGATTTTGAAGAAGACGAAGATGAGGAATTAGAGGACGAAGATGA

>NZ_CP053970|1|1|6354-6814|CRISPRCasFinder
GAATTAATTGATGAGGAAGAGGA	AGAGTTCACTCATGAGCCG
GAAGACGATGATGACGAAGAAGA	GGAACTTATTGAAGATGAAGATGAGGAAGAA
GAGGAAATAGAGGACGAAGATGA	AGAGGAGGAAGACGAG
GAACTTGAAGAAGACGAGGATGA	AGATTTAGAAGACGAAGAT
GATGATTTCGAAGAGGAAGATGA	AGAATTAGATGACGAGGAT
GAGGAAATAGAAGACGAAGATGA	AGATTTGGATGACGAGGATGAAGATTCAGAAGACGAGGAT
GAGGAAATCCTAGACGAAGATGA	TGATGAGAGTGGTTTAGTAGACACGGAT
GATGAAGATGAAGACGAAGCTGA	TTCTGAAGAAGACGAGGACGAAGAATTAGATGATGAAGAT
GATGATTCAGAAGACGAAGCTGA	TTTTGAAGAAGACGAAGAT
GAGGAATTAGAGGACGAAGATGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053970.1\|WP_043333180.1\|11846_12374_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000283262.1\|671_866_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000830697.1\|7594_8152_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_003255420.1\|11293_11812_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000823845.1\|9364_9985_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000687689.1\|3161_3950_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|341491
NZ_CP053970.1\|WP_000830179.1\|8155_8647_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000464419.1\|4355_5081_+\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP053970.1\|WP_000850686.1\|478_655_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000461270.1\|897_1914_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_001135708.1\|90_297_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000824419.1\|8664_9342_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000252699.1\|5179_6127_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|237394
NZ_CP053970.1\|WP_000823696.1\|10008_10491_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_003298989.1\|3965_4325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_001004734.1\|283_469_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000823697.1\|10513_10993_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000508139.1\|1901_3155_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238017
NZ_CP053970.1\|WP_000476432.1\|6945_7479_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000644807.1\|12416_13154_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053970.1\|WP_000687689.1\|3161_3950_+\|hypothetical-protein	gnl\|CDD\|341491	cd17792, CtkA, serine/threonine-protein kinase CtkA and similar proteins. The Helicobacter pylori serine/threonine-protein kinase CtkA (proinflammatory kinase), encoded by the jhp940 gene, has been shown to be secreted by the bacterium and to induce cytokines in gastric epithelial cells. It may play a role in chronic gastric inflammation. CtkA autophosphorylates itself at a threonine residue near the N-terminus and it translocates into cultured human cells. It also enhances phosphorylation of the NF-kappaB p65 subunit at Ser276 in human epithelial cancer cells; phosphorylation at this position is known to activate the transcriptional activity of NF-kappaB.	5.16994e-13
NZ_CP053970.1\|WP_000508139.1\|1901_3155_+\|FHA-domain-containing-protein	gnl\|CDD\|238017	cd00060, FHA, Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. Members of the FHA family include: Dun1, Rad53, Cds1, Mek1, KAPP(kinase-associated protein phosphatase),and Ki-67 (a human nuclear protein related to cell proliferation).	4.41815e-16
NZ_CP053970.1\|WP_000252699.1\|5179_6127_+\|HD-domain-containing-protein	gnl\|CDD\|237394	PRK13480, PRK13480, 3'-5' exoribonuclease YhaM; Provisional.	6.24554e-08
NZ_CP053970.1\|WP_000464419.1\|4355_5081_+\|serine/threonine-protein-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	3.48276e-55

>NZ_CP053970.1|WP_000252699.1|5179_6127_+|HD-domain-containing-protein
MVRVEEMQKLDKESISGVVWVHGYKQAPKKNKTGFYGMGDCYVKGGEKVAYRIWDDKLMNMMEQAVAKVGSSFFIEFEATGNVFNGLFSMSITELRFPKQENFNETDFMTVNLNARELNGKVNQILRNRVTPDALLVVGAILKGDIANRFATEFAGMHMHDAEPVGLLHHTTKMMEILDLVMVQHKNFGLDSNGVDLMYTGVLLHDIGKILELKNGLYTDIAIATHRFLGAEMIMEHKNFIIEKYDTLFYYNLISIITQHHGQYEERPRTIYSYIIHLIDNLEAQMTIIDEKYKEAKNGTEIYVNDFRLTVQKPQ
>NZ_CP053970.1|WP_000464419.1|4355_5081_+|serine/threonine-protein-phosphatase
MFEVVPFTDIGVVRETNEDNLVFLVGEFQGEEIALIVVCDGMGGLDDGENASRTVCQNLEETFANEEYETIAELKRAITMSITMSNKQLLNINMAKGKKGGTTVSCVLLADKGYLWHVGDSRIYQIKDGQVNRLTEDHTLVNKYIKDGDITEEEAKTHHQRNVILRAVGIKAGVKIDTNTFDYKDSSLVLCSDGFWHSLEDRQLVDLNNKHVSLNDLFQFAIAEGETDNITSVFVEHKSTN
>NZ_CP053970.1|WP_003298989.1|3965_4325_+|hypothetical-protein
MFDNIQIAHQEVVNNRHELVLENHLPSVYIIPRELFPQGVKRIPLGDIVNFIEWRIFPKEREDCKKLLKQLGLREYDPLEIAKRTKASLVEDGWWIAFSDTDTFEKDTVRGKMGYPRWN
>NZ_CP053970.1|WP_000687689.1|3161_3950_+|hypothetical-protein
MKIELLQLVDSTTSRGNLPKGWYNINGDVFLVKGNFHPNMVSGHTYDPYSEAMATLIARRLGFEHINYMLLPKQYFPELDVHGINHVSICKKLTLPQQTMRPLQRYLIDRFGVTKDDAFTQYKQVLPSLPLYKMLVFDALTGNEDRHLYNIDIIVDVLTGEERLAPIFDNGASLLSWVDDKDLKLASHFNKLDRAKPFRTTHQKQIKLVDQKIFPKLNLDALYTAIIQDITPILSLLPEDRANAIVKYLKWRMRYIGKVMEV
>NZ_CP053970.1|WP_000508139.1|1901_3155_+|FHA-domain-containing-protein
MGFVKLLTQDNEWVIVNELEKKEKAREDLAEYLKSENVDCILPFEIEKVKRKTFIRAKLTGKYSVLTRLQSPIDSREFVLLLKGIVDAMQTISSHNISPDYLDLDLDFIFINKENGKIELTLWILDNLAPKQNILHMFYQMGEVAKPKSSKDKTFLEGYAKMFQKEDMGLDKLDMFVNKTYSMLEQSVESSERAKENLAKQEVEIKETPIEEPVLEEPIIEEPVVQEQVIDEPDLVEPLIQEDDIEADVIIEEVKEPVVEAREEVASSVEIEESIQESDDDEILMPTDKTTFLMDDIEDEQEEDFDSGKTTILDEDDEEQIPYLIRESDGERYELSILKTETTFGKLGTDIQIKGNGLISRKHAVFHFEYGVVELEDIGSANGTFVNKKKLIKGRREQLAEGDVIKFANEVFQFFEG
>NZ_CP053970.1|WP_000461270.1|897_1914_+|hypothetical-protein
MFEDRLKIVDTSIPTFDILNEIDKKGRLRDVVVGGYVKHKIEKPPIFHSEELAPNCKFVSFRVHFIGEQGREKKLTKGELVVYVPNDLVENDFYEFRGTLSLAGFDYTRVVTMMRFKKKEVKLQDKGMKGHNRKDSYKQEYPKKENKMQYVWEVHPVSVSDLDLGSLSSNLYHETMQFIQSPLSYTHKKLNSILETQSSRIDTDKYYYDFSTPIDKDELLKRPTKDSTSFEEENNYIIDKDYGIILEALEYPVLLLNLEAFGLDKTMLNYMIWLVDGALDVYDSIEDLQNNKINQDYVVNEQEGVLNGTRRKVVLVSEPSKGYPYLELKKGDMISWGL
>NZ_CP053970.1|WP_000283262.1|671_866_+|hypothetical-protein
MYPKELLKKYSEKKEDSTQLLSMQGVVEIDKGKDSSEYMEIETRLKELENEMTDIAKVFIESFI
>NZ_CP053970.1|WP_000850686.1|478_655_+|hypothetical-protein
MKTKNNHVLYTKEDFTNKSPEEMESDTIANLVLDGGLAICKVCGEFEAGLDKECKPKE
>NZ_CP053970.1|WP_001004734.1|283_469_+|hypothetical-protein
MNENEFYKPVVPEWVAKILEKKKRNDPLATIGHSKEWENWKRKYPRKYKYAMLNGWIVEEK
>NZ_CP053970.1|WP_001135708.1|90_297_+|hypothetical-protein
MPQKKTYIGKVVEQEIDYGNSNALYHDVYIKEINDYLTQDLFNFEGKKVKVTVEVIEEDTKECQNERK
>NZ_CP053970.1|WP_000476432.1|6945_7479_+|hypothetical-protein
MFKRKILSIALPLMLVGGGCVQVYSGKAIEKKEIPKSHQTVTTVMYIDYLVNFMVDLEEANKSANKLLQLDESLNSVDMEFKSEIHSLKTSINVFKSIEPPKKYKEVHAKLLDSIISLDKGLDLVEQGIVDVESADFKTGKQTVMDSAEDYIKGLEEIDKLSGGEVSEAIDTWEEDK
>NZ_CP053970.1|WP_000830697.1|7594_8152_+|hypothetical-protein
MKRSLICLAVPMMLFAGGCGNEESKKEDKIAVASKEEKVAYIDQVIGFSNDFETIMKKMSKLTSDDMTLFSNKEEFIGVINEFTDLFDRLNNMEPDEKYKTQHEKLKRAMGYYAESFQIQLDNIDNPSSSELALSTSKLKDGLAIYKKSMGAINDIRRGNEIGTTEKSLEEKKQQNTTSETTEGE
>NZ_CP053970.1|WP_000830179.1|8155_8647_+|hypothetical-protein
MKRRLVALTIPVMLLGGVGCSKEEAQVKETDSLEVSQNDSSGTVSSSSSSNYQKETLKMTDEWSNLYLEISRKTSVGGDFKEVQGDLSELRMLTKKIEDIQAPDKYKKSQDKLKVAIRDYFIAVNESVSYLMSSSESSTVDYASQRERASQKFIEVLDEIRGL
>NZ_CP053970.1|WP_000824419.1|8664_9342_+|hypothetical-protein
MKRKVLAVALPITLALGVGCSKDSSEESKTDSIKVEDYKNADSVKETDSLKDAETKKEEADKGKFMKVVDEEMDKEALAQNPTLKKEATDKGQATGTMSEDKKELVAYQNKVNEGFEQFKTDLEATIPITQKDMELKTNKAELKAQYGKVKEQAIKLSEIEPPKEYPQFKENLKTNSDIIVMNIDQLFDDLLRDNTEKARSTKGDILDGLKYLKNTVEEIRRAGK
>NZ_CP053970.1|WP_000823845.1|9364_9985_+|hypothetical-protein
MKRKMLAVVLPLTLALGVGCSNGEDEKKKEEKANIEAEANKKALETVNKELDKLKEEKADLEKQTKEDKKIDKAKLKTVKEYQQEVDNKGLDFATEVQKVNPIIEKDQTLITNHQEVKEQFDKVKVVSKKLQDIKAPEQYEGLQTELKKSLIIYEKSIDKILEGVDELDENKVTTNINYMFEGLEMFGKAIDEIRALDEQNMSEVQ
>NZ_CP053970.1|WP_000823696.1|10008_10491_+|hypothetical-protein
MKRKLLALAIPMLLITGVGCESKDKKKDEVMEASIKQNKKEDYNKNASYLLKEFMEQTEEIDDSLDSWKSMDKKAVKLKELKKPYFELIEKIENLDYALKEDTQLQKDVGRAMFTAKTGIDMIEIGLKDEDKEAVNTSRKDLESASKSADKIVKELDKKK
>NZ_CP053970.1|WP_000823697.1|10513_10993_+|hypothetical-protein
MKRKLLALAIPMLLVTSIGVGCSAKEKQVDPKVSIEQNKKEDYKENLAYLMKDLSEQSKVVSDILTSKKSVEEKQKEFETASKDLLAIGDKVKALNASDKYKDVQLTMETAMGLLNMSVLSIKDGFEQKDGNLMSIGNDAIIKASKKIDEANKMMQEIK
>NZ_CP053970.1|WP_003255420.1|11293_11812_+|hypothetical-protein
MKRKVLAISLPVMLLSNVGCSADWIFAKDNEKEIHAIEKETKKEEQSYSNNISRLSSQLEIDVTELQKYFFDSSETGKEDLNTRLALFKTTISKIKKLEVPKNYKEAHKEVLKAVDLYESSINYRLESIEKKDQKGIDESKEKTKEAGDKLEEARKKVNSVDLQKSKEMWGK
>NZ_CP053970.1|WP_043333180.1|11846_12374_+|hypothetical-protein
MLLFGCGVVKDTKPKVEETSKAMLKTTVSEKEYPSYMYEQLVTFSFNKDDIILGISSKQKGDDRYNKIFETASIMDEALDRMENVKVPDKYKANHKLILEGVEDARKGIKPILEAKGKDVNEVNIAITNNLPHLDGMDRPQWKEAIYQLAKENKDDFEKVFTKVMEEQVKKKSNS
>NZ_CP053970.1|WP_000644807.1|12416_13154_+|hypothetical-protein
MKAKKLIALTLPVLLFTGCTLNTYGLTQAEYRKVDKEFKADRMIEDMERLHYSDEQIEAQLRGALSQLEYEEEQKKEEKSGKKEEKETDKEDSGESKIIRDSVYVSATDYVDFMFRELVNYKSYIKTITKESNALAEGGYEGSAKDTVRSLRKNLTDMLEVKIPKKYSDYEYKIRDANEALVKQMPDLEKAVDNYEDSSQDKKKVKEEVDKVLKEIDKAMYIWEPFFSDMNSMNPNSLRKAVEGK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP053970_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053970_2

162785-162922

Orphan

Consensus_repeat	Method
CTAAACCTGTACAAAAGCAAGAAG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP053970_2

>merge|NZ_CP053970|2|162785-162922|CRISPRCasFinder
CTCAACCTACTGAAAAGAAAGTAGAAGCACCTAAACCAACAGAACAGCCTAAAGAAGAGTCTAAACCTGTACAAAAGCAAGAAGTTGCTCAAACACAACAAGCGAAGTCTCAACCTAAACCTGTTCAAAAGCAAGAAG

>NZ_CP053970|2|2|162785-162922|CRISPRCasFinder
CTCAACCTACTGAAAAGAAAGTAG	AAGCACCTAAACCAACAGAACAGCCTAAAGAAGAGT
CTAAACCTGTACAAAAGCAAGAAG	TTGCTCAAACACAACAAGCGAAGTCTCAAC
CTAAACCTGTTCAAAAGCAAGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053970.1\|WP_001246921.1\|164927_165539_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000924700.1\|163436_164285_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198393
NZ_CP053970.1\|WP_000058018.1\|147982_148564_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000204760.1\|167227_167587_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000732164.1\|135666_136935_+\|L,D-transpeptidase-family-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP053970.1\|WP_003254758.1\|165646_166387_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000553982.1\|148643_149060_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000218244.1\|168911_169235_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_001007096.1\|166828_167209_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_003299120.1\|137574_145257_+\|VaFE-repeat-containing-surface-anchored-protein	unknown	unknown	gnl\|CDD\|227268
NZ_CP053970.1\|WP_003254767.1\|149311_150370_+\|DUF5011-domain-containing-protein	unknown	unknown	gnl\|CDD\|374521
NZ_CP053970.1\|WP_000843774.1\|166406_166823_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_003254777.1\|134269_135457_+\|potassium-transporter-TrkH	unknown	unknown	gnl\|CDD\|214682
NZ_CP053970.1\|WP_003298828.1\|168633_168891_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000810633.1\|150948_161529_+\|isopeptide-forming-domain-containing-fimbrial-protein	unknown	unknown	gnl\|CDD\|275067
NZ_CP053970.1\|WP_000961607.1\|167598_168309_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000258289.1\|145679_147092_+\|C39-family-peptidase	unknown	unknown	gnl\|CDD\|227323
NZ_CP053970.1\|WP_000442156.1\|147252_147963_+\|class-A-sortase	unknown	unknown	gnl\|CDD\|320680
NZ_CP053970.1\|WP_000957118.1\|164451_164850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP053970.1\|WP_000444162.1\|133622_134033_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053970.1\|WP_003254767.1\|149311_150370_+\|DUF5011-domain-containing-protein	gnl\|CDD\|374521	pfam16403, DUF5011, Domain of unknown function (DUF5011). This small family of proteins is functionally uncharacterized. This family is found in Bacteroides, Prevotella, and Parabateroides. Proteins in this family are around 230 amino acids in length.	1.91661e-09
NZ_CP053970.1\|WP_000924700.1\|163436_164285_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198393	cd10446, GIY-YIG_unchar_1, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria. The family includes a group of uncharacterized bacterial hypothetical proteins with a GIY-YIG domain that shows statistically significant similarity to the N-terminal catalytic domains of GIY-YIG family of intron-encoded homing endonuclease I-TevI and catalytic GIY-YIG domain of nucleotide excision repair endonuclease UvrC.	1.71269e-53
NZ_CP053970.1\|WP_003254777.1\|134269_135457_+\|potassium-transporter-TrkH	gnl\|CDD\|214682	smart00475, 53EXOc, 5'-3' exonuclease.	3.79747e-21
NZ_CP053970.1\|WP_000810633.1\|150948_161529_+\|isopeptide-forming-domain-containing-fimbrial-protein	gnl\|CDD\|275067	TIGR04226, Fimbrial_subunit_type_2, fimbrial isopeptide formation D2 domain. The Streptococcus Pneumoniae pilus backbone protein, RrgB, has three tandem domains with Lys-to-Asn isopeptide bonds, but these three regions are extremely divergent in sequence. This model represents the homology domain family of the D2 domain. It occurs just once in many surface proteins but up to twenty times in some pilin subunit proteins. Three of every four members have the typical Gram-positive C-terminal motif, LPXTG, although in many cases this motif may be involved in pilin subunit cross-linking rather than cell wall attachment. Proteins with this domain include fimbrial proteins with lectin-like adhesion functions, and the majority of characterized members are involved in surface adhesion to host structures.	5.57425e-22
NZ_CP053970.1\|WP_000732164.1\|135666_136935_+\|L,D-transpeptidase-family-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	5.40714e-36
NZ_CP053970.1\|WP_000442156.1\|147252_147963_+\|class-A-sortase	gnl\|CDD\|320680	cd06165, Sortase_A, Sortase domain found in class A sortases. Class A sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). They perform a housekeeping role in the cell as members of this group are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They do so by catalyzing a transpeptidation reaction in which the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class A sortases recognize a canonical LPXTG motif, X can be any amino acid), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase A protein from Staphylococcus aureus (named Sa-SrtA) cleaves the amide bond between threonine and glycine residues of the canonical LPXTG motif in a wide range of protein substrates with diverse functions that can promote bacterial adhesion, nutrient acquisition, host cell invasion, and immune evasion. Next, it catalyzes a transpeptidation reaction by which the proteins are covalently linked to the peptidoglycan precursor lipid II. SrtA is therefore affects the ability of a pathogen to establish successful infection. SrtA contains an N-terminal hydrophobic segment, a linker region and an extra-cellular C-terminal catalytic domain. The hydrophobic segment functions as both a signal peptide for secretion and a stop-transfer signal for membrane anchoring. The catalytic domain contains the catalytic TLXTC signature sequence where X is usually a valine, isoleucine or a threonine. The gene encoding SrtA is generally not located in the same gene cluster as its substrates while the gene encoding SrtB is usually clustered in the same locus as its substrate.	6.7124e-55
NZ_CP053970.1\|WP_000258289.1\|145679_147092_+\|C39-family-peptidase	gnl\|CDD\|227323	COG4990, COG4990, Uncharacterized protein conserved in bacteria [Function unknown].	8.3381e-42
NZ_CP053970.1\|WP_003299120.1\|137574_145257_+\|VaFE-repeat-containing-surface-anchored-protein	gnl\|CDD\|227268	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane].	4.64929e-59

>NZ_CP053970.1|WP_000810633.1|150948_161529_+|isopeptide-forming-domain-containing-fimbrial-protein
MKQKKYLSAVMATVIAFTTFMQPVVAGAETITGDKAKSEVKVEQEKAVQEPTVSPDVQTSEMDKKEVTNDKTPKSTTEEQERNKGQPVDEKKTVVEPKVSTTNANPTGVALTDEQKKEQAQLASTDEVKLSQNYVETDDNGDPLRLIEAGKDYTYEVNLDVSGNVTLLSDYVVKVEVEKKYLRDWGEPLHISKPELASEVTYADEGDKKVAYIKFPQLAGGTTLSFPVQLIVEAGLTPDMYEMKPMASLMDSKLNLVKKANEISYKVTYKKPGSQKYVNGQKENGSMVWAGIDDGKGVIKEGTEVPVEFSFSTDLEFLDNYRYFKAIEVVDTLPQGAKFDPKANPDWKLSADGKSVSTTVSLNEEIGMSTNGTLANKLSKLKLSLTFPNGKVNGTYTNNVTKTYIPEKAESYEPKVESKASIDFVLDAKPVGFVFTKKRSEDATIKDSLHYKGLDYTYRIEFKNPNSMPLHNVVIDDYKRKDGTYALDKRMEFTKVQTLNGEGEKVIAYIEEDGKVTEKQITKDGKYYNFPKGTKGYRYEVAKLDGAKFFQFLAYVKISNPKDVKYDTKDASKNLFENEASFKGEIQNPTDGKVIYKAEGTDKDDIPLVEFKESISLRKEITNSRDKVLKGGELHNRLFIHGADSNLDAETVIKGGKIIDLLPKGMTVVKSSVSRQGEVIPNYKNSGQTAIVWTFEDMKAGDFAPYTSKEYPQVGFTAIANDLSEEGTNINQAYLVFDDMENMGIEYKKDAQDKFDFNENSKTDDKVVYSEDYYVYVPNKEVVLTKSVQNEELAKNKVWSTDGVFVKYGEKANYKLNIKNHLDVDVPQVTVYDVLPFKGDRAIVPNDGGEYLSRESMYSNTLTGAINAPQGFTVYYTTDKVLDNASDSMTKLNWSKTLTDYSKATGIKIVMDNGKVLKSKESVDFEFGAIVPKTGLKAEDKAYNSAAVSVNGGTSFVEGNKVYTQMDIPEYPTITKDVEGKEHHDVDKGRTYQYNVKVKIPKNIKGYETLTIKDKLDRRLTYKYATLYKGYDVYNDAKVKVDGQELQVNLTKQDIENLQGKELNLKINAYINYDAPYELIENKADLQLNNESAIESNIVTVKPNPRKAKVTIAKVSGEGLNSFESVTKKLFGTTVKEVTEGNMVINPLDVLKANEEPKLLSGATFEILDSSKNVIHTVSTDYTGTVDIRDLDMGDYFIRETVAPKGYVLDSTEYPFTVKDTGTPSLEFKYSFYNKVDPIEPKLEKNILEHMTDGTVNRVSHKDVFRGEKYKYEVGTTIENLEGYKTIKLSDSLDARLDVHSAKLVVNSKDIQDVKPTIKGQDVSIVLTKEQLESFGMNKDGKLRIDLVIESSVKEGTNNEVIPNKGTLSLNDKPAVESNEVTVKPKDVTAKLVVVKTSGEKEHTFGQLADGQEPGKDLVKLAGAKFEVSNADRSKVETVVSNDNGLVELDNLPLGKYFIKEVEAPKGYKLDTNEYPFELKELKGTFHPVYEFTFYDVVDPETPQIVKDVNGKTHLETEYDKAFDYNVTTTIPKDLSGYEKVVMADSLDKRLDIKGVKVLVDGQESSYKATVKGQDVTLTLDRTELNKLANKQVRLQIEASIKYGTPAEIIDNKATITVNDKPSVDSNNVTVVPFLPLDPTIKKDVKGVEHLRVERERTYNYNVKSKIVDDVRGYKSLTVSDKLDKRLDVVDAKILVDGVESSYKATKSGQNVEVTFTREQLETLKGKEVNLQIQFKVKESTLAEEVPNMATITRNGDFNLDSNVVTVVPVDPETPKVVKDVNDVAHIDVVKGDEFTYHVKTTIPEDLLSYKSLTLADTLDKRLTINGSDVKIGGKAVKGIETKVDGQNVKFVLDRKQLEDYKGQEVVISIRAKVKYDAPIEIVNNKATIQVNDKPSVDSNNVTVKPENRKATLYLYKLSGEQSNTFGPALVEKGARKTSTTNPLLDSLKETEKNSVVNPLSSLTQSKHQPVPLEGGVFQILDASKNVVGTITSDSIGTAYIENLDLGNYFIKEVQAPKGYQLDSKEHPFTIVENGSKQLAFEYIFHDVKDPETPVITKDVEGKKHLEVEKGKEYKYNVKTTIPENVEGYESLTITDTLDNRLDLVNAKVYVDGRISTHVANIKGQTVTLNLTRVQLDQIEGKEVKIQITSKIKEDVAIETIENKANIQVNNKPSVDSNVVTVVPPTPENPNIKKDVEGLDHIVVEEGDNYNYNVKTVIAKNVKGYKTLTIKDELDNRLEVVNAKVLVDGKVSTLKADFKGNKVKLELTRSQLDSLQGKEVNLQITSKIKEGTGIVLIPNKATIELNDNPSIESNEVTVIPPTPDEPNIVKDVNGEKHAVVEHEENFNYNVKSVIPKDTKGYKTLTLKDTLDNRLDIVSTKVLVDGKPSTFKAVVEGQEVKLIVERSQLKTIEGKTLNLQITAKIKEGTPIETINNKATVQLNDKPEVDSNVVTVVPPTPIDPNIKKDVEGKEELVVEHKNEYNYNVKTKVADSVAGYKSLTIADTLDDRLDFVKSTVYVDGKASSFKAKVTGQNVVLELTRKQLDGLEGKELNLQITSKIKEGTPIEKIPNKATIQLNDKPSIDSNVVNVVPPTPIQPNIEKDVEGLQHLIIDTEKEFDYNVKSVIPKSVAGYKHITISDTLDKRLDLVDAKVQVNGKDTDFKVVKEGQKVTVKVDRKDLNGLEGKELNLVITAKIKDGTPIELIDNKANIQLNDQPLVESNEVTVIPPTPVQPDIYKNVEGTDRLEIEKEKEYNYTVKSVVPFNVMGYKHLTIEDMLDNRLDIVGVKVLVDDKESKYEAKVEGQHISLKLDRKELDTLLGKEVQLVITSKIKDSAPIEVIDNKATVQLNDEPKIDSNTVTVVPPTPVVPNIHKDVEGQEHIQVELEKEYKYNVKSVIPSKIDGYKTLTIADTLDKRLDVVEVNVFVDGKASKLVAERKGQDVKLVLDRKQLDDLKGKEVNVQITSKIKDGTPVEKIPNGASIQMNNLDAIQSNVVTVVPPTPVDPNIVKDIEGKQHLEVERGKVFNYNVKTKIADKVDGYKTLTIADKLDKRLGVVSATVLVDGKVSDLKAVVKGQDVTLTLDRKQLDKLMGAEVNVQIKALVLGDTKAENVPNKATIKLNDKPSIDSNVVTVIPPNPITPNIVKDVEGKEHLEIEQGKDYNYNVKTKIADSVAEYKYLTISDTLDKRLDIVKTTVLVDGVASELEANVKGQTVTLKLGRKQLDELVGKEVNVQITAQIKEGTEVNLIDNKATIQLNDNDAIESNVVTVIPPMPPVNPKVTKDVEGMNHIVIETGKEYDYNVKTTVANKLEGYKSLTIKDILDSRLTVVGAKVLVDGKETNFKVNIDNQEVTVKLTREQLETIKGKEINLVITSKINKGVAIENIENKATIQLNNRDLVESNTVTVIPPKPEEPVTPIPPKPEPPVTPEPPVKPEPPVKPEPPVKPEPPVKPEPVKPEPPKPVKPVKPEPPKPNKVEKPVPPKKPDRYLPRTGNAGDFGYTSYILFGSVIAIIVAVVYFTRRRKA
>NZ_CP053970.1|WP_003254767.1|149311_150370_+|DUF5011-domain-containing-protein
MLNKKLGIALGITAVLGLGIFGYKVYAKAPEIKTNEITIDYGKKLGTDKIETSTDVVKKQYKSATDTNKLGKQTIKVEVENDKGVTTEKEITLNVVDKEKPVIKTTQDKFVTKKGHSINLKQFVTAKDNVDGDLTNKILIQRFDYSKVGDIKVSMGVADSSDNFAEKTVIVSVVDEMPEVLTVPESRIVRTGDAFKPIDGVEAKDYNGKDLTSKININGNVDTSKAGEYSLTYQVTDSQGIFHQKSGLVVVKDEVVEKALRDEQKYKEENSVGDFVRPDKPETAKLLEDIADAKRKEGKKSIKDRAYDTVDKEKAAQTEKEIKDKVNDTTDSIKKEYDEHVKEHRKELGIDE
>NZ_CP053970.1|WP_000553982.1|148643_149060_+|hypothetical-protein
MHQLDFENKLADISKGRIVIEDSQIEHRDKEEDNIYKANWKGFEIYAKMGKNDWVENSYSVSTNRNVFEDKTLYENYHKLMESLIRIMDSKLTLEEIDKLIAKGVDENESPNTYDFGYERYVGKDKGNQIRFTITDRK
>NZ_CP053970.1|WP_000058018.1|147982_148564_+|hypothetical-protein
MSLQERIKAYRIPIVGVLLLLVVWFIFFRGSGSSGILTQQEFEDKLKEMSNGKIVISDSKIKMYESEDGGVYSANWNGFMLSSRVDKDKKLDRTFSIITKQAGYMDEISIGQYHDLVVYLTRLSNEKMSVDEANVLVDTGLNFNQQITTGEQHETSKGDLYYRLSGGKKDINFFSFLIMDEDGHKRVINPNKK
>NZ_CP053970.1|WP_000442156.1|147252_147963_+|class-A-sortase
MERRLKIRYGLIAGIIALGVGGYYVVDSMLQTDMRGIELDKNTIDENKKAKADFDLDSIKPLSEQELLENSLKRSTGWGKDLHYGNQGVVGGIYVPSVDIKLPISKGIGNNSLSRGVGTGFEDREMGKGNYVLLGHNSPNKHVLFSPLEDMKTGDIIYVTDATWMYEYETTDKKRIHQSQGEVMDNTTEDIITLITCFGGLNTDKRTVVTGKLKHKYPVSGAEKEIKTALNIKEDN
>NZ_CP053970.1|WP_000258289.1|145679_147092_+|C39-family-peptidase
MVTMKKLIKTGKSAIVGTVGVGVLLSTSHSISADTLKPVDEKVQESQLERLSQEEDKKLDVQVPDLNKEKQENEEGVEKPQTENQEVKDEKVVEDGNKEKKPEVKNEEKPVVNEEEKPKTDSLQVVDEEKKEEPQVEEEEIYVVYKKVNSTQIIEKSNNESIWSKPHMLKGAENLGSVDEYVGKEVQMSEMALANRKAWFKISVEGKELGWVSSSVMSVATDLESINKAVGTEGTDDKYSIYSLPKGMQNSQEVAKVNDYANQELKATKQTVYNGTMWYKVSQNGNEIGWLDSRSVSERTVLPHMNVPIESQLDAKDPSRNLETGCEITAVSMMLQFAGANVDKVLLAKEMPYHDYDPNKGYVGDPWSDGPINTVYPPALLDLVKKYAGSSVNLTGVSLDKIKEKLNQNHPVVAWVGDMHGFGIHAITLTGYTNDKVFYNDPWTGEKDASMSWDSFDSKWTPKKSRALSY
>NZ_CP053970.1|WP_003299120.1|137574_145257_+|VaFE-repeat-containing-surface-anchored-protein
MYMLDAFKRGKVSKVMFSVLSLLMLTISTLISPIFAHADDGEPNVVQRASGNWTQMWHEKYNNKGWVYDAGQKYSIETDVIRFGDNSIAYCLEMMLESPNGHSLEEKTRLSDEYYKIMNNGYPVKTPEQLGANSWQEAHYATQVAVWIVNQDVKYSNLTFKNANVKQVVDKILADANNSSDTQDLSFSITPDHIKAEMTPWSTEYRQAGPFTIKTNGNGTFKPEAINAPGKVTFVDSMGNPKTELNSWEPFFAQINSNTPTGSFNIKVTGDMTKTETVWYKSHSGGIQHTTALVTLHKTPTAQNASISWDSNGGFKIKKVDDAGNPLGGAKFDVINWGNQVVRSLTTDSNGMASTDGLWFEDYTVKETQAPDGYELDNTPQKVTVDSKDKTLTFVNRKSKGGFRIHKVDDSNKPLQGVVFTIYGNDGLKMFDRTTDANGIIQLGDLPYGEYHFKESKGLDGYEFDDDVKHITINADSQNKEYKVVNKLISGSIKITKTDEENRPLKGVQFLVYNQNGDVVGEAYTNEQGIATMGNLPYGTYAWLENKGLDGYEAEKKTGSFVVGKDQKDHAVTVINKRMKGGLEIYKIDDSHQPLQGVEFTIYKDGKEFKKVTTGKDGKIKLPDLEFGKYSVKETKGLEGYVTDFKEESFELSSQNRSKSMVVVNKKIKGSLEITKTDDASKPLAGVQFTIYKDGKEYEQITTDANGKIVLNDLPMGKYTFKETRGLEGYVVSTKEEAFEIKNLGDSKKFTVVNKAIKGSIEITKTDDASKPLKGVEFTVYKDGKEYTKVTTNDKGIAEVKDLPYGSYTFKETKGIEGYVPDSTTKGVDIKEDGKTHKYTVINKKIKGNLEITKTDDAKKPLKGVEFTVYDAKDKEVAKVVTDDKGKASVKDLPYGKYYFKETKGLEGYVFSKEKVEFEIKNLNETKSYNVVNKLIRSNIEITKVDNEGKLLEGVEFTIYDSNDKEVAKVVTDAQGKAKYENLPYGKYYFKETKNLEGYVKNGTKYDIDVKQDMQTLKYDVINKKIRGSVEVLKVDADKKEKPLQGVEFTLFDQNNKVVGKPKLTDKDGKVSFDKLAFGKYYIKETKTIKGYNINNEKFPVDIDTDGKVVKHTVTNKVIRGNVELLKVDTENKNVTLKGAEFELRGSNDEVLGKYKTDANGKLVIKDLVFGDYKLIETIAPTGFNLEQTPISFSISEEGKTIGLTKENLKIYGNMEVTKVDAEDNKKVLANAKFEVYNEKGDKVVEGTTDAKGKAKFEHLPYGKYTFKEVVAPEGYLVNPTVFNFDILENGKTVSHKVTDQIIKGDLEVKKVDMADKKGLSDAKFEVFNAEGKKVAEGKTNKDGYAKFEKLPYGKYTFKETVAPKGYFLNETVFNFEIKEDGKIIAQVVENEKVPSIKTTATEKHDGAKEMHTSKEVTITDKVEYKDLLIGKEYTVKGKLMDKETKKPLLVGGKEVTAEATFTPDKATGSINLDFTFDATGLEEKEVVVFEDLIKEGKTLTTHSDLEDKDQTVKFVKPSVSTTATDKADGTKELHAIKDVTIIDVVEYKNLVVGKNYTLKGKLMDKATKQPLVIDGKEVVAEKNFSPREKDGKVPLEFKIDASTLEGKQVVVFEDVVHNNFVIATHADIEDKGQTVDFVKPEVKTTATNKADKEKEIHAIKNITVQDKVDYKNLVVGKEYTVKGKLMVKETNKPLVIEGKEVTAEKTFKPTAKNGSVTLDFTFDASKLEGKELVVFEDVVFNKTTIATHSDIEDKDQTVRVVKPEVHTTATNKADEGKEIHAQEKVTIQDKVAYKDLVKGKEYTVKGKLMDKATNKPFKVDGKEVTAESKFTAKEKDGVVTVDFTFNAEKLQGKSLVVFEDLYYEKELIATHSDIKDEGQTVRIVKPEVKTTATNKADEGKEIHADQTVTIQDKVEYKDLIIGKEYTVKGKLMDKATNKPLLVNDKEVTAESKFKAEAKDGSIILDFTFDAKALQGKEVVVFEDLYNEKLLVATHSEIEDKDQTVKFVKPEVKTTATNKADELKEVHSNREITLKDVVEYKDLIVGKEYTVKGKLIDKGTEKPFLVNDKEVTSEAKFIAEAKDGSITLDFTFEAKDVEGKDIVVFEDLYQDSLLVATHSDIEDKGQTVNFVKPEVKTTATNKEDGLKNIHSNKTVTIQDKVEYKDLIVGKEYVVKGKLMDKATNEPFLVDGKEVTSETKFTAEDKNGSVILDFTFEAKGVEGKEVVVFEDLYNEDILIATHSDIEDKDQTVEFVKPEVGTKATNKADGGKELHTNKSVTIQDTVDYKGLIVDKEYVVKGKLMDKETNKPLLVNDKEVTAEAKFTAKKETGSVTLDFTFDATGLEGKEVVVFEDLYQDNVLVATHSDITDEGQTVKFVKPEVKTTATNKENGSKELDANKSVTVTDKVEYHDLIVGKEYVVKGKLMDKATNKPLIINGIEVTSETKFTAKEKNGSVNLDFTFDATELQGKELVVFEDLYQDNVLVATHSDINDVNQTVKVKVKPVQPKPEQPKPEQPKPQKKPVPQTGSDSNFGTTMSILMGIIALALGGVFVFTRKNKAE
>NZ_CP053970.1|WP_000732164.1|135666_136935_+|L,D-transpeptidase-family-protein
MKKLDVETLKKHKKKLIVAGIGVAVLTSAGFGGNYYVQAKETEKQEIQQKEAKKKEVAKQEAEKKKQDELKAKLAKEEADKKAEEERVKAEEQKKAEEEKAKAEEQAKQEAERVKQEEEKKVEEQKKAEEGKQEEQVNGNQEGKKQGNSQENKQSKTQGNEQTQGIKGVAKKAEEPQQGSQENPQAKQGGEQAKQQTNNQEQPKQVSQQPTNKGGNQQANVQQEQGTAMTRAVSNSSVGKRTDQIVAVVAQGSSAKVTYLEKHNGNWKEVFTTNGFVGSQGVGQANESVSRTPRGAHSLGFAFGTSNPGTNLPFRQITPKSYWISNVNDDQYNTWQERDSSSPQDEHLIKETVAYKYGIVINYNTSNPVKGGGSGFFLHVSNGRPTAGCVSVPQAKMVELMQKLHGGAYIVNVNSINEISNY
>NZ_CP053970.1|WP_003254777.1|134269_135457_+|potassium-transporter-TrkH
MKDEMLDLIGENADRRRVIIIDFNHLAWRYAFSNAKGLSINRLVNGVSTIIDTTVPSYAIKQIVRWSNFGVNPTIVCLDAPVKSRKAYFSNILNKDKKELIPSDYKGDRKTPNGDFIQQIEIAGALMQQGGIYVYRKENYEADDIIHACVQKAKKDFPYLPIDVITGDADMIPLVDEQVSVYMKSKVHTYANEYSPTIKGYVQYTPESYQTYVQELSKYKTSSTQILVPYNTLLLAKILRGDSSDGLKGKPDWKPRMYNQLIEQLIRYEEPIHEIFRYGTWTSEIIDRRTKEVVTDWSSWTPEERKHLFQNYKEPKELKMIEDVLSRHVDDEDIEFIRERYIGMLLNGAFLPNIHVPDEFKRRPYEIEDKKPFTGFDITKLQEAVNVLEIRLPMG
>NZ_CP053970.1|WP_000444162.1|133622_134033_+|hypothetical-protein
MESKLFKTEKTERGTRVFLKDPLLHNMLPKRVFFFLERPVWSIFSIPFTIPFLPVRVSFGLSTNEFSRVLDKYCENLEELSNIQVVDPKTSILPYPSLGVYKVNMVEGVMFDFKSDKDMKSLLCKMDKAVERFRRT
>NZ_CP053970.1|WP_000924700.1|163436_164285_+|GIY-YIG-nuclease-family-protein
MLLKDMLQVCGLDLTKRIKVARHVDKDIDVQELYEKDNFELYQSYQGKNSFNCDYIVSFLGLENSQAVFIGVYEVKNPTEVTGLPQSIDTTEELRKRLSKAKWQYTLEKVDGFETLENRVIVQWEGVATSWCRYLNTFDLEVLQMLPKGETRKFTGYLDFILKRWELESIVNNPLKYKSWHESLSIVAGVYLIVDTKTGKQYVGSAYNTEGIWGRWKTYVNNGHGGNKLLMEILKQDPDRVNDFTYTILQVLPNTYKDTEVFKVESLYKRKLGSRAFGLNSN
>NZ_CP053970.1|WP_000957118.1|164451_164850_+|hypothetical-protein
MLTNEYLDDLFEGIKIEGEDYFYYFYVYQIPKEGVLLVNGIIPVGDIEHIIVCFTNKRLLFLEITMMGKYTGNMKSIDLIEFEHIKVKRGMIRTSIVLTSKNGKGNTVIKANSFTFGLSNQKKNLIALEKLY
>NZ_CP053970.1|WP_001246921.1|164927_165539_+|hypothetical-protein
MRNYEKVSLETWVNQLNSLVEYEIKETQVHVEENNFEPFSRGNIGRSTVHDLEELEGILAGVVVEGDMLTIKLLDGKQSSYDLNYVTSIMRRTDSPCFYLYFGRVETHVEITIKVDRLGVPIKSTSSINKNISKDINIPVKEFINNKELVKSVNNGNNSEGYIVLKDVELRLPINALNGIRETEDGCLLSFHVAQTLDIKVDK
>NZ_CP053970.1|WP_003254758.1|165646_166387_+|hypothetical-protein
MEVVKMGEIKLAEDIKGEVISFKNFVSELKEKENKHIVVHKLIADLDKELYTDGELLHVKEGRGGSFTLIVDEEQAPSERTYFSFLVKEIRKNKTKYYMIFKQGYVLEFSFKKSGSPCIKREVKVATKPTSNKEASELRHTLNNLGFTETRSFKTFSNFLLKSKESGYTDILTINPKGKKVEGLLDSVTIIDGGILVHVYQLGKGLSAVKFLEQDTILVSEVKMEDLVYFMVYGKSIVSPVIVKTK
>NZ_CP053970.1|WP_000843774.1|166406_166823_+|hypothetical-protein
MKSVKVNSNCSVIIEQHLVESLLRKANLKEGEEVFTIQFNQDYKYILLGYIKQDLYIFLMTNKRMLLHKVNETTGHLMGGLITLDEKKVLIGNMETGVISLPFKEKKHQTFISYLVGVSEDYKSNLFRYRERFKWVKE
>NZ_CP053970.1|WP_001007096.1|166828_167209_+|hypothetical-protein
MNEWMREEVLKTVEDYVKGSGVQDYFFVSGKKFLHELLECGKYPYRLTALWEGYTYTGKVNEIVKEEEKGTITINLDVTEEGKEKSMVLEEIHTKHAIMQRTVDSVHFTLFYKDSLVPLHFVYLKK
>NZ_CP053970.1|WP_000204760.1|167227_167587_+|hypothetical-protein
MTSTLSTKRKQVLISNVGKSKVIPFNKLFYHMFKRIETGATISTFQDGLVVRGKFVSLTNLIHKNEIELILELPNSREVELYFKANDIEEVVHGFGSNYNSYTLFTSREVVPIIISNIE
>NZ_CP053970.1|WP_000961607.1|167598_168309_+|hypothetical-protein
MLVTEERTARGIKDLKGSKITFQELVAKLKSYEGCLVELTRVRDVGLHPVIVRSIETCQINQVDVQEDAWFKLHLENEQDHYYYFKSSIECILQNGTTYYIIQTNNTYFEFKVKEEVCHSKRLKNYIDGMRNSLGVFRFTDTLTYDDFLEFLDNFEDYNYTKVSVLDGNGNHVTGQIDEVITSRARVGFCIILDNGEHTTIDFERENIVSIVDIKNSRNKYFMIYELDSITPLILE
>NZ_CP053970.1|WP_003298828.1|168633_168891_+|hypothetical-protein
MYPMRNYQEAMAFINYKFQQYHANDVSMLINFLESQATSLQYQVNQLLTHYQPNYNLIERNRTYIDILGVDVDKLKQARAIINQY
>NZ_CP053970.1|WP_000218244.1|168911_169235_+|hypothetical-protein
MTVQYDYKAMIQANKDFDVSTLENARHYVQQLSQGRSYTSVKDLLAGIDWLHTQAHHNIARYDGEATPQQLEHMKDVKQLYYVQKQKLSEVFKTYKNYGFDPSQVLF

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP053970.1	195788-195806	1	0.947
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP053972.1	3327578-3327596	1	0.947
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP053972.1	1454796-1454814	2	0.895
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP053970.1	195788-195806	2	0.895
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP053972.1	2688848-2688866	2	0.895

1. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to position: 195788-195806, mismatch: 1, identity: 0.947

agatttagaagacgaagat	CRISPR spacer
agaattagaagacgaagat	Protospacer
*** ***************

2. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to position: 3327578-3327596, mismatch: 1, identity: 0.947

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacaaagat	Protospacer
*************.*****

3. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to position: 1454796-1454814, mismatch: 2, identity: 0.895

agatttagaagacgaagat	CRISPR spacer
agatttagaagaagatgat	Protospacer
************ ** ***

4. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to position: 195788-195806, mismatch: 2, identity: 0.895

agaattagatgacgaggat	CRISPR spacer
agaattagaagacgaagat	Protospacer
********* *****.***

5. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to position: 2688848-2688866, mismatch: 2, identity: 0.895

ttttgaagaagacgaagat	CRISPR spacer
tttagaagaagccgaagat	Protospacer
*** ******* *******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74482-74500	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6377-6395	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264191-264209	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	132911-132929	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	249912-249930	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	132911-132929	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8678-8696	0	1.0
NZ_CP053970_1	1.1\|6377\|19\|NZ_CP053970\|CRISPRCasFinder	6377-6395	19	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132419-132437	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74428-74458	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6419-6449	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264233-264263	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	132953-132983	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	249954-249984	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	132953-132983	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8624-8654	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132461-132491	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74347-74365	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8543-8561	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6512-6530	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264326-264344	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133046-133064	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250047-250065	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133046-133064	0	1.0
NZ_CP053970_1	1.4\|6512\|19\|NZ_CP053970\|CRISPRCasFinder	6512-6530	19	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132554-132572	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74305-74323	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8501-8519	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6554-6572	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264368-264386	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133088-133106	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250089-250107	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133088-133106	0	1.0
NZ_CP053970_1	1.5\|6554\|19\|NZ_CP053970\|CRISPRCasFinder	6554-6572	19	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132596-132614	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6596-6635	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264410-264449	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133130-133169	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250131-250170	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133130-133169	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132638-132677	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74242-74281	0	1.0
NZ_CP053970_1	1.6\|6596\|40\|NZ_CP053970\|CRISPRCasFinder	6596-6635	40	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8438-8477	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74191-74218	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8387-8414	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6659-6686	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264473-264500	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133193-133220	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250194-250221	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133193-133220	0	1.0
NZ_CP053970_1	1.7\|6659\|28\|NZ_CP053970\|CRISPRCasFinder	6659-6686	28	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132701-132728	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6710-6749	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264524-264563	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133244-133283	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250245-250284	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133244-133283	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132752-132791	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74128-74167	0	1.0
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8324-8363	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	74086-74104	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6773-6791	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264587-264605	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133307-133325	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250308-250326	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133307-133325	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8282-8300	0	1.0
NZ_CP053970_1	1.9\|6773\|19\|NZ_CP053970\|CRISPRCasFinder	6773-6791	19	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132815-132833	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	267632-267667	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	162809-162844	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	71022-71057	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	289344-289379	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	56745-56780	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	289345-289380	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	201829-201864	0	1.0
NZ_CP053970_2	2.1\|162809\|36\|NZ_CP053970\|CRISPRCasFinder	162809-162844	36	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	288957-288992	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	267578-267607	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	162869-162898	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	71082-71111	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	289404-289433	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	56805-56834	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	289405-289434	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	201775-201804	0	1.0
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	289017-289046	0	1.0
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KJ019094	Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome	126876-126906	5	0.839
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KJ019156	Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome	126967-126997	5	0.839
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KJ019054	Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome	126967-126997	5	0.839
NZ_CP053970_2	2.2\|162869\|30\|NZ_CP053970\|CRISPRCasFinder	162869-162898	30	NZ_CP022523	Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence	39281-39310	5	0.833
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_014533	Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence	849306-849336	6	0.806
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MN694597	Marine virus AFVG_250M99, complete genome	9510-9540	6	0.806
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_041878	Pectobacterium phage CBB, complete genome	189070-189100	6	0.806
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	73969-73999	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	6878-6908	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	264692-264722	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	133412-133442	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	250413-250443	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	133412-133442	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	8165-8195	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	132920-132950	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MT325768	Psychrobacillus phage Perkons, complete genome	24091-24121	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248783-248813	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_041887	Rhodococcus phage Weasels2, complete genome	61428-61458	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_047920	Citrobacter phage vB_CroP_CrRp3, complete genome	3181-3211	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	LC494302	Escherichia phage SP27 DNA, complete genome	271901-271931	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	370932-370962	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MK817115	Escherichia phage vB_EcoM_phAPEC6, complete genome	204541-204571	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_027364	Escherichia phage PBECO 4, complete genome	12987-13017	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MH383160	Escherichia phage UB, complete genome	73575-73605	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MK327931	Escherichia phage vB_EcoM_G17, complete genome	229835-229865	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	LT603033	Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I	213513-213543	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KM236246	Bacillus phage Moonbeam, complete genome	124274-124304	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KM507819	Escherichia phage 121Q, complete genome	272645-272675	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_049857	Lactococcus phage P1048, complete genome	82457-82487	7	0.774
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_014534	Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence	2052-2082	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP050837	Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-3, complete sequence	10031-10061	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP008843	Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence	2602-2632	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP024642	Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence	13775-13805	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP024642	Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence	144599-144629	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP042547	Klebsiella michiganensis strain C52 plasmid pC52_002, complete sequence	114591-114621	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP011634	Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-228, complete sequence	26911-26941	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP026718	Klebsiella oxytoca strain AR_0028 plasmid unitig_3_pilon, complete sequence	88033-88063	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MG967616	Bacillus phage v_B-Bak1, complete genome	44632-44662	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_047815	Erwinia phage vB_EamM_Yoloswag, complete genome	248759-248789	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	KC595511	Bacillus phage Basilisk, complete genome	45666-45696	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MG967618	Bacillus phage v_B-Bak10, complete genome	46060-46090	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MG967617	Bacillus phage v_B-Bak6, complete genome	44632-44662	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_013160	Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence	58963-58993	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP032289	Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence	43-73	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MG592495	Vibrio phage 1.121.O._10N.286.46.C4, partial genome	130932-130962	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MK448911	Streptococcus phage Javan34, complete genome	36795-36825	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MH518298	Pseudomonas phage SCYZ1, complete genome	16480-16510	8	0.742
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_018516	Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence	255363-255393	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053970	Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence	175083-175113	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP053979	Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence	83296-83326	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP013277	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence	301618-301648	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP039723	Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence	69019-69049	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009348	Bacillus thuringiensis HD1002 plasmid 2, complete sequence	301619-301649	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP009334	Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence	189560-189590	9	0.71
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NZ_CP045024	Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence	301231-301261	9	0.71
NZ_CP053970_1	1.8\|6710\|40\|NZ_CP053970\|CRISPRCasFinder	6710-6749	40	MH844558	Exiguobacterium phage vB_EauM-23, complete genome	29181-29220	9	0.775
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MK448704	Streptococcus phage Javan213, complete genome	32825-32855	10	0.677
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_048080	Acinetobacter phage vB_AbaM_B09_Aci05, complete genome	92031-92061	10	0.677
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MT623546	Acinetobacter phage Ab_121, complete genome	42972-43002	10	0.677
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	NC_048074	Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome	92258-92288	10	0.677
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MH800199	Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome	92464-92494	10	0.677
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	MT121964	Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds	66589-66619	11	0.645
NZ_CP053970_1	1.2\|6419\|31\|NZ_CP053970\|CRISPRCasFinder	6419-6449	31	AP014193	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C71-MedDCM-OCT-S24-C63, * SEQUENCING IN PROGRESS *	10293-10323	11	0.645

1. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

2. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

3. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

4. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

5. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

6. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

7. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

8. spacer 1.1|6377|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agagttcactcatgagccg	CRISPR spacer
agagttcactcatgagccg	Protospacer
*******************

9. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

10. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

11. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

12. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

13. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

14. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

15. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

16. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggaacttattgaagatgaagatgaggaagaa	Protospacer
*******************************

17. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

18. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

19. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

20. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

21. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

22. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

23. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

24. spacer 1.4|6512|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttagaagacgaagat	CRISPR spacer
agatttagaagacgaagat	Protospacer
*******************

25. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

26. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

27. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

28. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

29. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

30. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

31. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

32. spacer 1.5|6554|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agaattagatgacgaggat	CRISPR spacer
agaattagatgacgaggat	Protospacer
*******************

33. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

34. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

35. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

36. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

37. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

38. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

39. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

40. spacer 1.6|6596|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

agatttggatgacgaggatgaagattcagaagacgaggat	CRISPR spacer
agatttggatgacgaggatgaagattcagaagacgaggat	Protospacer
****************************************

41. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

42. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

43. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

44. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

45. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

46. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

47. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

48. spacer 1.7|6659|28|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

tgatgagagtggtttagtagacacggat	CRISPR spacer
tgatgagagtggtttagtagacacggat	Protospacer
****************************

49. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

50. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

51. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

52. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

53. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

54. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

55. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

56. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
ttctgaagaagacgaggacgaagaattagatgatgaagat	Protospacer
****************************************

57. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

58. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

59. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

60. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

61. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

62. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

63. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

64. spacer 1.9|6773|19|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttttgaagaagacgaagat	CRISPR spacer
ttttgaagaagacgaagat	Protospacer
*******************

65. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

66. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

67. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

68. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

69. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

70. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

71. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

72. spacer 2.1|162809|36|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

aagcacctaaaccaacagaacagcctaaagaagagt	CRISPR spacer
aagcacctaaaccaacagaacagcctaaagaagagt	Protospacer
************************************

73. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

74. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

75. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

76. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

77. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

78. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

79. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

80. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 0, identity: 1.0

ttgctcaaacacaacaagcgaagtctcaac	CRISPR spacer
ttgctcaaacacaacaagcgaagtctcaac	Protospacer
******************************

81. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KJ019094 (Synechococcus phage ACG-2014e isolate Syn7803US33, complete genome) position: , mismatch: 5, identity: 0.839

ggaact--tattgaagatgaagatgaggaagaa	CRISPR spacer
--atctggtattgaagaggaagatgaagaagaa	Protospacer
  * **  ********* ********.******

82. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KJ019156 (Synechococcus phage ACG-2014e isolate Syn7803C2, complete genome) position: , mismatch: 5, identity: 0.839

ggaact--tattgaagatgaagatgaggaagaa	CRISPR spacer
--atctggtattgaagaggaagatgaagaagaa	Protospacer
  * **  ********* ********.******

83. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KJ019054 (Synechococcus phage ACG-2014e isolate Syn7803C85, complete genome) position: , mismatch: 5, identity: 0.839

ggaact--tattgaagatgaagatgaggaagaa	CRISPR spacer
--atctggtattgaagaggaagatgaagaagaa	Protospacer
  * **  ********* ********.******

84. spacer 2.2|162869|30|NZ_CP053970|CRISPRCasFinder matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 5, identity: 0.833

ttgctc-aaacacaacaagcgaagtctcaac	CRISPR spacer
-tgcacgaaacacaacaagcgaactcgcaaa	Protospacer
 *** * **************** ** ***

85. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_014533 (Gloeothece verrucosa PCC 7822 plasmid Cy782201, complete sequence) position: , mismatch: 6, identity: 0.806

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
gcagcttattgaagaggaagatgatgaagtt	Protospacer
* *.*********** ******** ****

86. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MN694597 (Marine virus AFVG_250M99, complete genome) position: , mismatch: 6, identity: 0.806

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
gtatccttttgcagatgaagatgaggaggaa	Protospacer
* * *.* *** ***************.***

87. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 6, identity: 0.806

ggaactta--ttgaagatgaagatgaggaagaa	CRISPR spacer
--aagtgaatttgatgatgaagatgacgaagaa	Protospacer
  ** * *  **** *********** ******

88. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

89. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

90. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

91. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

92. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

93. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

94. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

95. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgatatcatcgaagacgaagatgaggaagat	Protospacer
 **  *.**.*****.**************

96. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MT325768 (Psychrobacillus phage Perkons, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
atggattattgaaaatgaatatgaggaagaa	Protospacer
. .. ********.***** ***********

97. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ggacgaagatgaagatgaagatgaggacgaa	Protospacer
***    . ****************** ***

98. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_041887 (Rhodococcus phage Weasels2, complete genome) position: , mismatch: 7, identity: 0.774

----ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
gcgcgga----tttgaagatgaagatgagggagat	Protospacer
    ***     ******************.***

99. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_047920 (Citrobacter phage vB_CroP_CrRp3, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttat-tgaagatgaagatgaggaagaa	CRISPR spacer
-agtctggtatgaagatgaagaagaggaagaa	Protospacer
 .. ** .* ************ *********

100. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to LC494302 (Escherichia phage SP27 DNA, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

101. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 7, identity: 0.774

---ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
tatcgaat---ttgaagatgaagatgatgaggaa	Protospacer
    ***.   **************** **.***

102. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MK817115 (Escherichia phage vB_EcoM_phAPEC6, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

103. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_027364 (Escherichia phage PBECO 4, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

104. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MH383160 (Escherichia phage UB, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

105. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MK327931 (Escherichia phage vB_EcoM_G17, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

106. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to LT603033 (Escherichia phage vB_Eco_slurp01 genome assembly, chromosome: I) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

107. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KM236246 (Bacillus phage Moonbeam, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgaacgtattgtagatgaagatgaaaaacac	Protospacer
 **** ***** ************..** *

108. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KM507819 (Escherichia phage 121Q, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaatcagttgaagaagacgatgaggaagaa	Protospacer
.***.. .******* ** ************

109. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_049857 (Lactococcus phage P1048, complete genome) position: , mismatch: 7, identity: 0.774

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agagttatttgaagatgatgatgaagaagaa	Protospacer
.**..*  ********** *****.******

110. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_014534 (Gloeothece verrucosa PCC 7822 plasmid Cy782202, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
tgcctgtattgaagatgaagataaggcagat	Protospacer
 *  . ****************.*** ***

111. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP050837 (Klebsiella pneumoniae strain Bckp021 plasmid pBckp021-3, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

112. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP008843 (Klebsiella michiganensis strain M1 plasmid pKOXM1B, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

113. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP024642 (Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

114. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP024642 (Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

115. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP042547 (Klebsiella michiganensis strain C52 plasmid pC52_002, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

116. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP011634 (Klebsiella oxytoca strain CAV1374 plasmid pCAV1374-228, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

117. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP026718 (Klebsiella oxytoca strain AR_0028 plasmid unitig_3_pilon, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ctacgtagatgaagatgaagatgaagaagaa	Protospacer
  *  * . ***************.******

118. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MG967616 (Bacillus phage v_B-Bak1, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agttggtattgaagatgaagttgaggaatta	Protospacer
.*    ************** *******  *

119. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_047815 (Erwinia phage vB_EamM_Yoloswag, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
cgacgaagatgaagatgaagatgaggacgaa	Protospacer
 **    . ****************** ***

120. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to KC595511 (Bacillus phage Basilisk, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agttggtattgaagatgaagttgaggaatta	Protospacer
.*    ************** *******  *

121. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MG967618 (Bacillus phage v_B-Bak10, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agttggtattgaagatgaagttgaggaatta	Protospacer
.*    ************** *******  *

122. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MG967617 (Bacillus phage v_B-Bak6, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agttggtattgaagatgaagttgaggaatta	Protospacer
.*    ************** *******  *

123. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_013160 (Rippkaea orientalis PCC 8802 plasmid pP880201, complete sequence) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ttatttaattgaacatgaagatgacgaagat	Protospacer
  * .* ****** ********** *****

124. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP032289 (Acinetobacter lwoffii strain ED9-5a plasmid pALWED3.4, complete sequence) position: , mismatch: 8, identity: 0.742

---ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
ttcaaaat---ttgaagatgaagatgaagatgaa	Protospacer
   ..**.   ****************.** ***

125. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MG592495 (Vibrio phage 1.121.O._10N.286.46.C4, partial genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
tgtgtatcttgaagtagaagatgaggaagaa	Protospacer
 * .. * ******  ***************

126. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MK448911 (Streptococcus phage Javan34, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
tcagtttattgaagctgaagaggaggaaaag	Protospacer
  *..********* ****** ******.*.

127. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MH518298 (Pseudomonas phage SCYZ1, complete genome) position: , mismatch: 8, identity: 0.742

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
gttctatgttgaagatgaagaagaggaggaa	Protospacer
*   . *.************* *****.***

128. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_018516 (Bacillus thuringiensis HD-789 plasmid pBTHD789-1, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

129. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053970 (Bacillus thuringiensis strain FDAARGOS_796 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

130. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP053979 (Bacillus thuringiensis strain FDAARGOS_795 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

131. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP013277 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-2-350K, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

132. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP039723 (Bacillus thuringiensis strain BT-59 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

133. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009348 (Bacillus thuringiensis HD1002 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

134. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP009334 (Bacillus thuringiensis strain HD1011 plasmid 2, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

135. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NZ_CP045024 (Bacillus thuringiensis strain JW-1 plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.71

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
agaaccaattgaagatgaagatgaaatcgtt	Protospacer
.****. *****************..  *

136. spacer 1.8|6710|40|NZ_CP053970|CRISPRCasFinder matches to MH844558 (Exiguobacterium phage vB_EauM-23, complete genome) position: , mismatch: 9, identity: 0.775

ttctgaagaagacgaggacgaagaattagatgatgaagat	CRISPR spacer
tgcctaaaccgacgaggacgaagaatgtgatgatgaagaa	Protospacer
* *. **.  ****************  ***********

137. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MK448704 (Streptococcus phage Javan213, complete genome) position: , mismatch: 10, identity: 0.677

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
acgctggattgaagatgaagaacaggaagag	Protospacer
. . .  **************  *******.

138. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_048080 (Acinetobacter phage vB_AbaM_B09_Aci05, complete genome) position: , mismatch: 10, identity: 0.677

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
aagtattattgaggatgaagatgagcaattc	Protospacer
...  *******.************ **

139. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MT623546 (Acinetobacter phage Ab_121, complete genome) position: , mismatch: 10, identity: 0.677

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
aagtattattgaggatgaagatgagcaattc	Protospacer
...  *******.************ **

140. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to NC_048074 (Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome) position: , mismatch: 10, identity: 0.677

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
aagtattattgaggatgaagatgagcaattc	Protospacer
...  *******.************ **

141. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MH800199 (Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome) position: , mismatch: 10, identity: 0.677

ggaacttattgaagatgaagatgaggaagaa	CRISPR spacer
aagtattattgaggatgaagatgagcaattc	Protospacer
...  *******.************ **

142. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to MT121964 (Phage DP SC_6_H4_2017 DNA cytosine methyltransferase and putative helicase genes, complete cds) position: , mismatch: 11, identity: 0.645

ggaacttattgaagatgaagatgaggaagaa------	CRISPR spacer
------tactgatgatgaagatgaagaggaggaagaa	Protospacer
      **.*** ***********.**.**.

143. spacer 1.2|6419|31|NZ_CP053970|CRISPRCasFinder matches to AP014193 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C71-MedDCM-OCT-S24-C63, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 11, identity: 0.645

ggaacttattgaagatgaagatgaggaagaa------	CRISPR spacer
------cgatgaagatgaagatgaagaagaggaagaa	Protospacer
      .. ***************.*****.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage