Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP053988 Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome 8 crisprs csa3,WYL,cas3,DEDDh 0 1 145 0

Results visualization

1. NZ_CP053988
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_1 234715-234844 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_2 638169-638278 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_3 1281855-1281942 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_4 1571600-1571707 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_5 1575720-1575829 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_6 1588689-1588801 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_7 1590206-1590330 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP053988_8 1608449-1608559 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP053988_1 1.1|234763|34|NZ_CP053988|CRISPRCasFinder 234763-234796 34 NZ_AP022593 Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence 1563640-1563673 10 0.706

1. spacer 1.1|234763|34|NZ_CP053988|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 10, identity: 0.706

cgccgagtggaccactggctccggacatttgtgg	CRISPR spacer
ttcaaagtggaccactggctccggaggttttgca	Protospacer
. * .******************** .***   .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 7410 6 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_2 36169 : 39885 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_3 51098 : 51836 1 Acanthamoeba_polyphaga_moumouvirus(100.0%) NA NA
DBSCAN-SWA_4 63591 : 65561 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_5 74706 : 86708 10 Bacillus_phage(40.0%) tRNA NA
DBSCAN-SWA_6 90078 : 97432 6 Acanthamoeba_polyphaga_moumouvirus(25.0%) NA NA
DBSCAN-SWA_7 101992 : 102643 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_8 107574 : 110220 1 Klosneuvirus(100.0%) tRNA NA
DBSCAN-SWA_9 116253 : 118464 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_10 130439 : 130715 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_11 137313 : 142164 6 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_12 176646 : 184474 7 Synechococcus_phage(50.0%) NA NA
DBSCAN-SWA_13 189190 : 189649 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_14 192771 : 202641 8 Mycobacterium_phage(20.0%) tRNA NA
DBSCAN-SWA_15 205733 : 206336 1 Euphorbia_ringspot_virus(100.0%) NA NA
DBSCAN-SWA_16 218889 : 221069 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_17 228437 : 234666 5 Bacillus_phage(33.33%) transposase NA
DBSCAN-SWA_18 238589 : 245521 4 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_19 248881 : 254654 3 Bacillus_phage(50.0%) tRNA NA
DBSCAN-SWA_20 283143 : 286479 3 environmental_halophage(50.0%) NA NA
DBSCAN-SWA_21 293746 : 297455 3 Saccharomonospora_phage(33.33%) transposase NA
DBSCAN-SWA_22 300656 : 301955 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_23 313579 : 319090 3 Lactobacillus_phage(50.0%) NA NA
DBSCAN-SWA_24 326162 : 332714 4 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_25 340124 : 341405 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_26 345479 : 348863 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_27 359468 : 364313 5 Aeromonas_phage(33.33%) NA NA
DBSCAN-SWA_28 377012 : 377705 1 Clostridium_phage(100.0%) NA NA
DBSCAN-SWA_29 380875 : 382704 2 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_30 393823 : 398003 5 Geobacillus_virus(50.0%) NA NA
DBSCAN-SWA_31 403587 : 406539 3 Mycoplasma_phage(66.67%) NA NA
DBSCAN-SWA_32 417667 : 427166 10 Synechococcus_phage(20.0%) tRNA NA
DBSCAN-SWA_33 432127 : 433189 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_34 444276 : 444822 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_35 452028 : 461148 7 Staphylococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_36 468315 : 473830 4 uncultured_virus(50.0%) tRNA NA
DBSCAN-SWA_37 483026 : 494755 8 Ralstonia_phage(25.0%) NA NA
DBSCAN-SWA_38 499675 : 500485 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_39 517171 : 518401 1 Moumouvirus(100.0%) NA NA
DBSCAN-SWA_40 559819 : 560293 1 Saccharomonospora_phage(100.0%) transposase NA
DBSCAN-SWA_41 572865 : 576457 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_42 598387 : 599335 1 Oenococcus_phage(100.0%) NA NA
DBSCAN-SWA_43 608121 : 609561 1 Tupanvirus(100.0%) tRNA NA
DBSCAN-SWA_44 613849 : 616234 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_45 620366 : 621299 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_46 627411 : 632018 5 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_47 636693 : 640692 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_48 653340 : 654027 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_49 659117 : 659861 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_50 665093 : 666479 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_51 674827 : 675121 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_52 684408 : 688806 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_53 708313 : 710443 3 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_54 714055 : 715240 1 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_55 724471 : 738345 13 Planktothrix_phage(28.57%) NA NA
DBSCAN-SWA_56 743828 : 745534 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_57 762662 : 764687 1 Hokovirus(100.0%) tRNA NA
DBSCAN-SWA_58 784619 : 797614 12 Streptococcus_phage(44.44%) NA NA
DBSCAN-SWA_59 803618 : 825079 20 Streptococcus_phage(28.57%) protease,tRNA NA
DBSCAN-SWA_60 847996 : 849289 1 Megavirus(100.0%) NA NA
DBSCAN-SWA_61 855296 : 856472 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_62 867226 : 874607 8 Bacillus_phage(40.0%) NA NA
DBSCAN-SWA_63 878373 : 890347 11 Bacillus_virus(40.0%) NA NA
DBSCAN-SWA_64 894513 : 896100 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_65 908673 : 913723 4 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_66 918645 : 924205 9 Beluga_whale_alphaherpesvirus(33.33%) tRNA NA
DBSCAN-SWA_67 929366 : 937920 7 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_68 961190 : 983828 15 Streptococcus_phage(28.57%) tRNA NA
DBSCAN-SWA_69 987753 : 988398 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_70 991807 : 998008 5 Streptococcus_phage(25.0%) NA NA
DBSCAN-SWA_71 1007856 : 1012115 3 Chrysochromulina_ericina_virus(33.33%) tRNA NA
DBSCAN-SWA_72 1016674 : 1024392 5 Organic_Lake_phycodnavirus(25.0%) tRNA NA
DBSCAN-SWA_73 1029432 : 1030677 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_74 1040419 : 1040665 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_75 1053081 : 1059298 7 Streptococcus_phage(33.33%) protease NA
DBSCAN-SWA_76 1068780 : 1075753 5 Streptococcus_phage(25.0%) transposase NA
DBSCAN-SWA_77 1082343 : 1086065 4 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_78 1098795 : 1100346 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_79 1104926 : 1109538 5 Mycobacterium_phage(50.0%) transposase NA
DBSCAN-SWA_80 1115002 : 1118167 4 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_81 1124825 : 1129439 3 Streptococcus_phage(66.67%) NA NA
DBSCAN-SWA_82 1133000 : 1142438 7 Bacillus_phage(40.0%) transposase NA
DBSCAN-SWA_83 1147067 : 1150192 2 Moraxella_phage(50.0%) tRNA NA
DBSCAN-SWA_84 1162434 : 1163928 1 Klebsiella_phage(100.0%) NA NA
DBSCAN-SWA_85 1170010 : 1174559 3 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_86 1181823 : 1182741 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_87 1188247 : 1188817 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_88 1198919 : 1199723 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_89 1206161 : 1208505 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_90 1217878 : 1221488 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_91 1226998 : 1228882 2 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_92 1234731 : 1240511 3 Ralstonia_phage(33.33%) NA NA
DBSCAN-SWA_93 1245546 : 1250130 2 Herpes_simplex_virus(50.0%) NA NA
DBSCAN-SWA_94 1255686 : 1261028 6 Oenococcus_phage(50.0%) NA NA
DBSCAN-SWA_95 1268593 : 1269829 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_96 1291358 : 1293094 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_97 1298115 : 1298964 1 Microcystis_virus(100.0%) NA NA
DBSCAN-SWA_98 1304285 : 1306958 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_99 1311877 : 1314446 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_100 1325404 : 1326094 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_101 1344512 : 1351669 6 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_102 1355237 : 1358796 3 Enterococcus_phage(66.67%) NA NA
DBSCAN-SWA_103 1366346 : 1367843 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_104 1386507 : 1403978 18 Lactobacillus_phage(12.5%) transposase NA
DBSCAN-SWA_105 1411241 : 1412219 1 Indivirus(100.0%) NA NA
DBSCAN-SWA_106 1415438 : 1416329 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_107 1425613 : 1437093 10 Streptococcus_phage(57.14%) NA NA
DBSCAN-SWA_108 1440747 : 1441932 1 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_109 1458258 : 1459776 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_110 1474220 : 1482538 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_111 1490781 : 1492287 1 Vibrio_phage(100.0%) NA NA
DBSCAN-SWA_112 1499109 : 1502122 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_113 1509557 : 1510274 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_114 1515654 : 1521725 5 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_115 1533284 : 1545826 11 Streptococcus_phage(28.57%) NA NA
DBSCAN-SWA_116 1550229 : 1597380 42 Paenibacillus_phage(30.77%) transposase,protease,holin NA
DBSCAN-SWA_117 1608624 : 1609809 1 Paenibacillus_phage(100.0%) transposase NA
DBSCAN-SWA_118 1625003 : 1637699 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_119 1657949 : 1658393 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_120 1666392 : 1667682 1 Flamingopox_virus(100.0%) NA NA
DBSCAN-SWA_121 1673554 : 1675978 1 Iris_mild_mosaic_virus(100.0%) NA NA
DBSCAN-SWA_122 1690360 : 1693770 5 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_123 1703251 : 1704460 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_124 1711224 : 1718733 6 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_125 1725722 : 1732404 5 Bacillus_virus(33.33%) tRNA NA
DBSCAN-SWA_126 1736479 : 1737211 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_127 1744516 : 1757034 11 Klosneuvirus(16.67%) tRNA NA
DBSCAN-SWA_128 1761374 : 1768575 5 Bacillus_phage(66.67%) NA NA
DBSCAN-SWA_129 1772576 : 1778005 3 Mycobacterium_phage(50.0%) NA NA
DBSCAN-SWA_130 1782111 : 1792550 7 Streptomyces_phage(25.0%) NA NA
DBSCAN-SWA_131 1797998 : 1798640 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_132 1802805 : 1809001 5 Bacillus_virus(33.33%) protease NA
DBSCAN-SWA_133 1817806 : 1830878 11 Bacillus_phage(16.67%) protease NA
DBSCAN-SWA_134 1837824 : 1839201 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_135 1846115 : 1847708 2 Xanthomonas_phage(50.0%) NA NA
DBSCAN-SWA_136 1854282 : 1855263 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_137 1861836 : 1862553 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_138 1868924 : 1871528 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_139 1886768 : 1889066 1 Cafeteria_roenbergensis_virus(100.0%) NA NA
DBSCAN-SWA_140 1892373 : 1990865 107 Streptococcus_phage(18.6%) capsid,protease,portal,tRNA,head,integrase,tail,holin,terminase attL 1898802:1898820|attR 1950071:1950089
DBSCAN-SWA_141 1995579 : 1999788 5 Clostridium_phage(33.33%) NA NA
DBSCAN-SWA_142 2014430 : 2019606 4 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_143 2026511 : 2029123 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_144 2035004 : 2041766 6 Halovirus(33.33%) NA NA
DBSCAN-SWA_145 2045649 : 2046540 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage