CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP048103	Kroppenstedtia eburnea strain DSM 45196 chromosome, complete genome	17 crisprs	csa3,cas14j,cas3,WYL,DEDDh,cas6,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7,RT,cas2,cas1,cas4,cas5,cas7,cas8b2	7	4	7	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP048103_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_1

82097-82171

Orphan

Consensus_repeat	Method
AGTGACCTAGGCGAGACTTGTGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_1

>merge|NZ_CP048103|1|82097-82171|CRISPRCasFinder
AGTGACCTAGGCGAGACTTGTGCTGGTGAGTGCATAGCGAGACCGGAAACGAAGTGACCTTGGCGAGACTTGTGC

>NZ_CP048103|1|1|82097-82171|CRISPRCasFinder
AGTGACCTAGGCGAGACTTGTGC	TGGTGAGTGCATAGCGAGACCGGAAACGA
AGTGACCTTGGCGAGACTTGTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076523527.1\|79156_80887_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NZ_CP048103.1\|WP_076523537.1\|69015_72408_+\|phage-tail-family-protein	unknown	unknown	gnl\|CDD\|368574
NZ_CP048103.1\|WP_009710732.1\|94594_94891_+\|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl\|CDD\|198403
NZ_CP048103.1\|WP_076523529.1\|76108_76816_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|119407
NZ_CP048103.1\|WP_009710720.1\|81311_81908_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP048103.1\|WP_076525195.1\|91334_91991_+\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP048103.1\|WP_076525199.1\|92339_93362_+\|DNA-polymerase-III-subunit-delta'	unknown	unknown	gnl\|CDD\|181214
NZ_CP048103.1\|WP_009710723.1\|83331_83604_+\|pro-sigmaK-processing-inhibitor-BofA-family-protein	unknown	unknown	gnl\|CDD\|163046
NZ_CP048103.1\|WP_076525193.1\|89892_91308_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224893
NZ_CP048103.1\|WP_076525197.1\|91987_92317_+\|cyclic-di-AMP-receptor	unknown	unknown	gnl\|CDD\|283747
NZ_CP048103.1\|WP_084190095.1\|89622_89859_+\|sigma-factor-G-inhibitor-Gin	unknown	unknown	gnl\|CDD\|378490
NZ_CP048103.1\|WP_009710719.1\|80920_81232_+\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP048103.1\|WP_076523539.1\|67324_69019_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP048103.1\|WP_076525398.1\|93321_94128_+\|stage-0-sporulation-family-protein	unknown	unknown	gnl\|CDD\|224688
NZ_CP048103.1\|WP_076523531.1\|75667_76063_+\|holin-family-protein	unknown	unknown	gnl\|CDD\|227161
NZ_CP048103.1\|WP_084189840.1\|77620_79036_+\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|236901
NZ_CP048103.1\|WP_076523533.1\|75399_75684_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387558.1\|94213_94558_+\|DNA-replication-initiation-control-protein-YabA	unknown	unknown	gnl\|CDD\|183876
NZ_CP048103.1\|WP_076523535.1\|72409_75403_+\|phage-tail-protein	unknown	unknown	gnl\|CDD\|377677
NZ_CP048103.1\|WP_076523525.1\|82220_83219_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	gnl\|CDD\|376806

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076523527.1\|79156_80887_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP048103.1\|WP_076523537.1\|69015_72408_+\|phage-tail-family-protein	gnl\|CDD\|368574	pfam05709, Sipho_tail, Phage tail protein. This family consists of several Siphovirus and other phage tail component proteins as well as some bacterial proteins of unknown function.	1.15787e-24
NZ_CP048103.1\|WP_009710732.1\|94594_94891_+\|GIY-YIG-nuclease-family-protein	gnl\|CDD\|198403	cd10456, GIY-YIG_UPF0213, The GIY-YIG domain of uncharacterized protein family UPF0213 related to structure-specific endonuclease SLX1. This family contains a group of uncharacterized proteins found mainly in bacteria and several in dsDNA viruses. Although their function roles have not been recognized, these proteins show significant sequence similarities with the N-terminal GIY-YIG endonuclease domain of structure-specific endonuclease subunit SLX1, which binds another structure-specific endonuclease subunit SLX4 to form an active heterodimeric SLX1-SLX4 complex. This complex functions as a 5' flap endonuclease in yeast, and has also been identified as a Holliday junction resolvase in human.	3.92797e-34
NZ_CP048103.1\|WP_076523529.1\|76108_76816_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|119407	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3.5.1.28) is an autolysin that hydrolyzes the amide bond between N-acetylmuramoyl and L-amino acids in certain cell wall glycopeptides. These proteins are Zn-dependent peptidases with highly conserved residues involved in cation co-ordination. MurNAc-LAA in this family is one of several peptidoglycan hydrolases (PGHs) found in bacterial and bacteriophage or prophage genomes that are involved in the degradation of the peptidoglycan. In Escherichia coli, there are five MurNAc-LAAs present: AmiA, AmiB, AmiC and AmiD that are periplasmic, and AmpD that is cytoplasmic. Three of these (AmiA, AmiB and AmiC) belong to this family, the other two (AmiD and AmpD) do not. E. coli AmiA, AmiB and AmiC play an important role in cleaving the septum to release daughter cells after cell division. In general, bacterial MurNAc-LAAs are members of the bacterial autolytic system and carry a signal peptide in their N-termini that allows their transport across the cytoplasmic membrane. However, the bacteriophage MurNAc-LAAs are endolysins since these phage-encoded enzymes break down bacterial peptidoglycan at the terminal stage of the phage reproduction cycle. As opposed to autolysins, almost all endolysins have no signal peptides and their translocation through the cytoplasmic membrane is thought to proceed with the help of phage-encoded holin proteins. The amidase catalytic module is fused to another functional module (cell wall binding module or CWBM) either at the N- or C-terminus, which is responsible for high affinity binding of the protein to the cell wall.	4.64737e-64
NZ_CP048103.1\|WP_009710720.1\|81311_81908_+\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	5.18924e-124
NZ_CP048103.1\|WP_076525195.1\|91334_91991_+\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	1.25326e-85
NZ_CP048103.1\|WP_076525199.1\|92339_93362_+\|DNA-polymerase-III-subunit-delta'	gnl\|CDD\|181214	PRK08058, PRK08058, DNA polymerase III subunit delta'; Validated.	1.94248e-111
NZ_CP048103.1\|WP_009710723.1\|83331_83604_+\|pro-sigmaK-processing-inhibitor-BofA-family-protein	gnl\|CDD\|163046	TIGR02862, Sigma-K_factor-processing_regulatory_protein_BofA, pro-sigmaK processing inhibitor BofA. Members of this protein family are found only in endospore-forming bacteria, such as Bacillus subtilis and Clostridium tetani. Among such bacteria, it appears only Symbiobacterium thermophilum lacks a member of this family. The protein, designated BofA, is an integral membrane protein that regulates the proteolytic activation of the RNA polymerase sigma factor K. [Cellular processes, Sporulation and germination].	1.4149e-09
NZ_CP048103.1\|WP_076525193.1\|89892_91308_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224893	COG1982, LdcC, Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].	4.94899e-120
NZ_CP048103.1\|WP_076525197.1\|91987_92317_+\|cyclic-di-AMP-receptor	gnl\|CDD\|283747	pfam06153, CdAMP_rec, Cyclic-di-AMP receptor. CdAMP is a family of bacterial cyclic-di-AMP receptor proteins. Cyclic-di-AMP (c-di-AMP) is a bacterial secondary messenger involved in various processes, including sensing of DNA-integrity, cell wall metabolism and potassium transport. CdAMP_rec has a ferredoxin-like fold and is structurally related to Pii-signal transduction proteins.	9.61646e-67
NZ_CP048103.1\|WP_084190095.1\|89622_89859_+\|sigma-factor-G-inhibitor-Gin	gnl\|CDD\|378490	pfam10764, Gin, Inhibitor of sigma-G Gin. Gin allows sigma-F to delay late forespore transcription by preventing sigma-G to take over before the cell has reached a critical stage of development. Gin is also known as CsfB.	4.23673e-12
NZ_CP048103.1\|WP_009710719.1\|80920_81232_+\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	2.10003e-44
NZ_CP048103.1\|WP_076523539.1\|67324_69019_+\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	3.18152e-17
NZ_CP048103.1\|WP_076525398.1\|93321_94128_+\|stage-0-sporulation-family-protein	gnl\|CDD\|224688	COG1774, COG1774, Uncharacterized homolog of PSP1 [Function unknown].	1.31341e-107
NZ_CP048103.1\|WP_076523531.1\|75667_76063_+\|holin-family-protein	gnl\|CDD\|227161	COG4824, COG4824, Phage-related holin (Lysis protein) [General function prediction only].	2.80946e-41
NZ_CP048103.1\|WP_084189840.1\|77620_79036_+\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|236901	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS.	3.11166e-71
NZ_CP048103.1\|WP_040387558.1\|94213_94558_+\|DNA-replication-initiation-control-protein-YabA	gnl\|CDD\|183876	PRK13169, PRK13169, DNA replication initiation control protein YabA.	4.16761e-44
NZ_CP048103.1\|WP_076523535.1\|72409_75403_+\|phage-tail-protein	gnl\|CDD\|377677	pfam06605, Prophage_tail, Prophage endopeptidase tail. This family is of prophage tail proteins that are probably acting as endopeptidases.	9.90471e-37
NZ_CP048103.1\|WP_076523525.1\|82220_83219_+\|CPBP-family-intramembrane-metalloprotease	gnl\|CDD\|376806	pfam02517, Abi, CAAX protease self-immunity. Members of this family are probably proteases (after a isoprenyl group is attached to the Cys residue in the C-terminal CAAX motif of a protein to attach it to the membrane, the AAX tripeptide being removed by one of the CAAX prenyl proteases). The family contains the CAAX prenyl protease. The proteins contain a highly conserved Glu-Glu motif at the amino end of the alignment. The alignment also contains two histidine residues that may be involved in zinc binding. While they are involved in membrane anchoring of proteins in eukaryotes, little is known about their function in prokaryotes. In some known bacteriocin loci, Abi genes have been found downstream of bacteriocin structural genes where they are probably involved in self-immunity. Investigation of the bacteriocin-like loci in the Gram positive bacteria locus from Lactobacillus sakei 23K confirmed that the bacteriocin-like genes (sak23Kalphabeta) exhibited antimicrobial activity when expressed in a heterologous host and that the associated Abi gene (sak23Ki) conferred immunity against the cognate bacteriocin. Interestingly, the immunity genes from three similar systems conferred a high degree of cross-immunity against each other's bacteriocins, suggesting the recognition of a common receptor. Site-directed mutagenesis demonstrated that the conserved motifs constituting the putative proteolytic active site of the Abi proteins are essential for the immunity function of Sak23Ki - thus a new concept in self-immunity.	5.89387e-17

>NZ_CP048103.1|WP_009710720.1|81311_81908_+|recombination-protein-RecR
MNVPEPISKLIDGFMRLPGIGPKTAQRLAFFVLGMEEEDVMELAKALVHAKRDLKRCQVCSNITDQPVCSVCRDKSRDRSMICVVQDPRDVIAMERTREYAGLYHVLHGAISPMEGIGPDELSIPDLLKRLEDETVQEMILATNPNIEGEATAMYLQRLVKPFGIKVTRIAHGLPVGGDLEYADEVTLTKALEGRREL
>NZ_CP048103.1|WP_009710719.1|80920_81232_+|YbaB/EbfC-family-nucleoid-associated-protein
MKNMNQMMKQMKKMQAQMAKAQEELADKEVEGTAGGGVVKVVMNGHKQVLSVEIDPEAVDPEDVEMLQDMVTAAFNEAMKNVDDLVSKDLGKLTGGLNIPGLF
>NZ_CP048103.1|WP_076523527.1|79156_80887_+|DNA-polymerase-III-subunit-gamma/tau
MSYRALYRVWRPQKFEDLIGQEHVTTTLKNALAEGHFSHAYLFSGPRGTGKTSAAKIMAKAVNCLQGPAPEPCNECDACRKITDGSLMDVVEIDAASNRGVDEIRDLRDKVKYAPSEVRCKVYIVDEVHMLTAEAFNALLKTLEEPPGHAIFILATTEPHKLPSTIISRCQRFSFRRHTLGNTLGHLRKICDSQGIQAEDSALAVIAQAADGGMRDALSLLDQVLAFSDDRVDEAAVLSVTGSVSRATLGDLMEACLGRDAGTALEKVEELLADGLEPERLIHDLVQLSRDLLLLAAAPELKEVQERLAGEERWNRLIKRESIDGLEGVLETLIQTQQQMKWAPHPRVLLEMALVRICHHSGPPSPQERGDADLIAGLQEQLKQLKQKVEELSGLAASPPVAEPAPPPSVRREPAAGGGERTGRKNLGPARLAPLLKEASTEALQKLQRAWPEVLARVKERKITVHAWLIDGEPVAATEDTLLMAFKNNIHRETTEKDSNKKLIEQVMKEVLGSTIRLMTVMREDWEKERSAAGVPSVTGRESGEKEVPPQEGSESDDPVERAVEMFGKDMVEITD
>NZ_CP048103.1|WP_084189840.1|77620_79036_+|PAS-domain-containing-sensor-histidine-kinase
MPIAFHLDLHPDQLASWVKNCTQAVVTVDDQGVVKTVSPQFLKLLQCPLDQVVEQPLDRYLHLPPEEMERLRHPDAHGGLRWVQGELLPFGSSPKTVTLQRISGKSSDGWLHLLLIYSRDQGAHHLQRHAEQIVNSLPQGIVLLDSTLRVTEINPAACRMFGVNKDDLCGQEMKRLFLRLEGGEGVDELEDRIRRREPFRDIPASWILEGVPQVVTVDYEIAAESGGESFLTINDITRNHLLDLKVRQTDRLAMIGQMAAGTAHEIRNPLTSIRGFLQVIRHTLDERGDLKGQGYAEIMLREIDRINHLLGEFLLMGKPRNVKKRRVELDHSLRELLPIIENEAILHNIEVRYLPGLKDFPPVWADPELLKQVVLNLCKNGIEAMGEGGLLQLRLSGDEERLILEVEDHGPGIPDSEINLIFDPFYTTKENGTGLGLAVSKQIIEDIGGEIQVSSGEAGSIFSVILPCVRD
>NZ_CP048103.1|WP_076523529.1|76108_76816_+|N-acetylmuramoyl-L-alanine-amidase
MAKKIFIDPGHGGKDPGATGNGLKEKDLTLAIARECRRVLQQEYTGHSIRMSREKDQTVSLRQRTEEANRWGAHFFLSIHINAGGGTGFESYRYVKQGSAMTMAVQKEVHAVVLARSGWKDRRKKWANFHVLRESKMPAVLTENGFIDTGADAAKLKDPAFVKKLGRAHAEGLAKALGLKKKPSSAPPVSAPKRDQLIRVRVNGKQAGAFAQPENAVDLVEKVAKPGAVIDVNMV
>NZ_CP048103.1|WP_076523531.1|75667_76063_+|holin-family-protein
MEKAIKWILGLGGASASFLWGGWSSLLGVLLFLVILDYLSGMIAAAMEGKLNSGVGMIGITKKILTFALVAVAHLVDGTLGENHLFRDAAIFFYLANEMLSILENAGRIGVPIPPGFHQAIELLKGKEEEK
>NZ_CP048103.1|WP_076523533.1|75399_75684_+|hypothetical-protein
MKIVLHNDERVVDVIGGCQEIRVHGDRIRWEGGDLCAPFFLVPDEVDVHPEDPVDSVADHCRKQDWEPPDPQWMQELLERVEALEKGVEHGKSD
>NZ_CP048103.1|WP_076523535.1|72409_75403_+|phage-tail-protein
MICIFDKDENLRSTLLQEEGFLHWAEAKIEEELNGQTSMDLSVPYFVNSPDHPGSGERNHPDVHWIEVENTLVVKMTDYNRDEEYFREFVIKETELDTEADLKIAYCHDSAIAELNDEKVEEKRPGYGSDSGTTARIALQDALEGSRWVPGIVEDLGLSRAHFFHESRLACVHKILEAWGAEVRFRVEVSGSGIVGRYVDLFAERGADRGKRIELGKDLMALNLNISSENLKTAIWPRGKGLKSDGEEDLDPAAGRRVSIAEVEWSQALGDPVEKPKGQEWIGLPEELEAWGRGKPGQKRHKMVDVVFEEIEDPETLAQEAFKLLQELAKPEVSADIRMMDLEHQTSHEAVRLGDTVRLVISSVDPAIRLRARVVKRVQYLGEMERTEVTIGSQVETTLELSREIRREVEKEFGKVAPITWKDSMIDLLNNEIVSSNAYLYMNTSDGMILFNRPRDQHPDEAMQMVAAGLRISATKDPEGEFIWTTAITAKGIHADAITTGQMKADRIGAGILSLGGKDFGAAQLFLRDREDNIIAHFDGEARSWNELRAGAMYAPNVPRRTTLEDELSTTSLYVHPVAGDDVEGDGTSSHPFRTLQRAVDFIPEVNDATWDIRVIEPTKYPISEHLEIRGFRGDGIVRFRMDGVRFNGWVRLSSNLHRFAFYGGHYYHNGQGHPRTPEGPIATFHVIRTNILYMENCCVSAEQKAEHAMSATYGSFVEAHDCYFDRGLRNGAQAIRGSKMYINNCGGRENGEFGAYASINSEIAISGDVVDQKIYCPAGKGGGTGEDHFFWYSTWTSEVRVPSTYAGRKRSGLRVAIPENKILTAYPTEVASWRGQGGDTDDGRGWHVGRLLQGAGFYPHLLAEGEDGYGGNHAGFVWFGNINFKTRLAGRTIKDVRVQLRRAPRFTPDTPKEVQCWLHNYVRQDEAEDWEPSRVLMESHKVGSYSWNDERRFTLPRSAGERLAKGEAIGLAFFHEDWTQGLEIVPRSVVLEVVYE
>NZ_CP048103.1|WP_076523537.1|69015_72408_+|phage-tail-family-protein
MIRWNGVDLLDHFDKILDIRRDILPPRMLRTQEAPGRDGVYLAGVTRGARIIEVDVLMIDRSHSSLRQRVEEVASILDRDEPVPMEIEDEPDRIRYVILSEETDLEEIVHTGRTTLRFFMPDPWKVSKEENFKEITSPPVTFERQSTADDPEGMVPPQQPRYREGKFGQGIFIEEGTTNLLSTPENPAVEEVDVQAGETYTLSHDMGQVEVGHHREEDLSAGEFHNVRLVEGKLVLNKYGEDRKEDLNIAEGGHFQTVYDPEKGWIQLGTETEGPTSLTHDEGTAEWAGGQNSGVQVEKSSIIMNNFPDWEETDNLTDYVKTGWEARIKPTRVTQTANTVRMDSYLNESVALVKEMPGRSDLRSIEFLYYLTTPPEPYDETAGFRTQFIWVLDMPMPGDESRRVAFYPTLFQEASINGKYPGYAWVRLVITRMPVAGDGGNVDVYINGQYNRSLPASGSTLSPRFQFIMENEMQGRFYLADFKFSSTSLHETQSSYLFPLTGERVTPDIELNDLGEYRDSSVTYSWRSNSDLPAGAEDYEHQVGLEADVYVNPIVEWSGYEPVVKGKIPQLESGQSLAGKKVRFRARLQSFDNYRSPYLDGLSVTVEGFRSETYTSGTWTADPIPLDGVGRACRATLNYIADTPLLTRVVAEVALEVDGILGEWVVVGNGEEIPALTRKLDLTGARLHVRFHLSGTTRTSPHLESVEVDLVSAFVEEGVRISPVTDLSSIRRAADSFAGMVQHSPEGTRVIYEAQLGDGVWQEITADILPGIETGDDLQGVTLRTRLRLSADPRGEQTPAVLAARWRVDQEMSGENGVTRLVPATAQLVLTPVGVRRWQLEAREYGTSFHPDTRKPEVLWFPAPVALNEGEGTLSLWAYEDGIPRRKYLLDTDGEFRFSIYRSEGMEGYRVRVNNEPLFDLPLPPTGQFNQIVVRWSGNEVAAFINGVLRDSSSLSEPVSFAEASRLYLGSDRLGNAQWNERLDEVHFSSVARPDAYLTDPERLTQPEAVDRDTAYLLRFDASLADSSTILIHEGSAPTLPRFEVRIERDMDALKILHIETGRFLLIQGTLKPGDTVLLGDPGDPVRINGHPRKQWLSLDSDFFRLVKGDNTFEVTEGAQVIAYWRERWK
>NZ_CP048103.1|WP_076523539.1|67324_69019_+|hypothetical-protein
MSASIKVDFEDFNKRVKGLSEAMDKAKTQLIAAAAAAGGTISVVLGLSVAASPEVKKAFAQLKESFDQAKENIGEALAPAVLLVIDVLKTFVDIFNHLPGPIQTFLVVAVTLGTIMLGMVVMAANLAGAFLALAMAEWSVLAPVLAVLAAIVAVIAIFALLVYAIVEAYNRVSWFRTAVDTVWSAIKEAFATALTFIKEIVQTVMTAVTDFFRSQMEWIMEVVEPVWQWIKEAFHTGLTFIQDIVQTVMTGVTDFFQSKLEQIQQFWDENGELIMAAVKRVWGWIEPFISAVMEAVSGVIQFVWELIKSITLFIWNGIKDVITTVLGWIQTFISGVMSTIQSIIQMAWTVIKTVTMSVWEGIKGYISTIITAIQNIVKAVAQLIMGDWSGALNTMWSTGKSILKGILSTFNNMLGGLPAKALAWGANLITGFIDGFKSKLSYLKKVVEDAAKVVGDFLGFSSPTKRGPGRTSHRWAPNLMEMFSTGIRAGVPDVRMATREVVSTLAVVGEGGAAPVTGEGNVPEYVMVQIDLDKRQLAQVLAKPTAQLHNRTNRRHATAMGVSF
>NZ_CP048103.1|WP_076523525.1|82220_83219_+|CPBP-family-intramembrane-metalloprotease
MLPNVSVQPAGKGPDPDKNPVSAKLRLAAAWLLCFSYFYMIPMEFSSLEWEKTGEGLWRATEGGTGLLVAVQLLLWLTGTLLVSILFLVTGLVGGFQYERKPGDGPLRGRDLAYYFAWVQVLTFASLFLFSPFVQDGGWISTFLPYFPHLLMVLLALFLFRGRLSSLGFRSFPGRRWLGICAAVGIAYAFIYFLLDPLVTEPVARIFSLDMTSWREDSISRGLAKAAGLGWVFGAGQVLMIGVIGPIAEEVLFRGVLMGVLAKRVGVAAAVFLSSAVFALSHVDVAFLAPLFVMGLILGILYAYFKNLWVPILFHIVNNTVSVVLDLLQMNG
>NZ_CP048103.1|WP_009710723.1|83331_83604_+|pro-sigmaK-processing-inhibitor-BofA-family-protein
MAIEWWMLAAAVSVILFMLISRSVVKPLRWIWYSLLYSAVGALLLFVLNLAAEWVEFRIPINPVTAFITGVLGLPGLVCLVMVKLFLVGG
>NZ_CP048103.1|WP_084190095.1|89622_89859_+|sigma-factor-G-inhibitor-Gin
MDEKIEKGGSILEKNDRIRCIVCNEWHEQGIGVLDGFICEACEQEIVKTDVKDQKYPHFVTRLKLLWMDGKNQIERGL
>NZ_CP048103.1|WP_076525193.1|89892_91308_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MNQEEAPLFEALCFHKDQNRGNYHVPGHKQGKAFDPLGRELFGDLLTIDLTEIAALDDLHQPEGVIRQAQELAAAAFGADRTFFLVGGSTAGNISLILAACQPGDQLIIHRASHQSVFNGCHLAGVRPVFLSGRGDVPLGGEITVEDLEEAILRHPGVKGVFLTSPDYFGRLQPISQLAKICHRHGLPLMVDEAHGAHFQFHPHLPPPALTQGADGVVQSTHKMLTAMTMGSMLHLKGSRLDRNRVAKGLGMIQSSSPSYPLMASLDLARRLMATGGQKELQKTLHQASLIREQVAGMRHLQEEVQPEGDPLKLNIRADRRISGYKMLKWLEKQGIDPELADHEKVLFVLSPGMEGEESVRLIEALHRLDQAIPGWEEDPRQPVPDIPVLSESHLSWDRLRSVAGETVSLPQAEGRMAAEMVVPYPPGVPSVLPGEMLSAEQIRHILHTLDKGGRVRGLTPGFPPGLHVIK
>NZ_CP048103.1|WP_076525195.1|91334_91991_+|dTMP-kinase
MKGCFITLEGPEGAGKSTQTTRLKRFLEKRRLPCIATREPGGTPIGDRIRELLLDPGAGEMSLQAEVLLYAASRAQLVEEVIRPALEKGWTVLCDRYVDSSMVYQAYGAGASPKDVRQVNQVAIQGLLPDRTYLLDLPLEESIRRLEGRGISRDRIELKGQAYHQKVRDGFHHLATLHPERFCIIDGTLSADEVFSRIVMDLQKTLGEKIPLREDGSG
>NZ_CP048103.1|WP_076525197.1|91987_92317_+|cyclic-di-AMP-receptor
MKMVIAVVQDKDSNRLSDALVKNNIRATKLASTGGFLKSGNTTFLIGIEDDRVEGVLQIIKENCSSRKQLMAPISSMGGNADSYVPYPVEVEVGGATVFILPVHRFEQF
>NZ_CP048103.1|WP_076525199.1|92339_93362_+|DNA-polymerase-III-subunit-delta'
MSFEEIRGQDQVIRLLQNALKNGRVAHAYCFAGPEGAGKKKAAIEWAKALNCENPASAPCDRCRSCRRISNGNHPDITILAPEGASIKIEQVRELQRRFSFTPPEEVTRVVILHQAETLTLQAANSLLKFLEEPVARMVAVLITEQVHSLLPTILSRCQLLRFRPLPPVLIESSLVEAGVDPANARIAAHLVSGVEAAEKLAGDDKFAPVCERMIKWMGEIPSGKSNPLVEIQTVWLADFDPGEMNLLLDLSLLWLRDLLNERLGVTGDSVFVGWKESRRHQASRWTISGLLNGMEAVIQARQALAGPVQPQAVLERMVLAMQGGPKHVVSRRSPFQTSG
>NZ_CP048103.1|WP_076525398.1|93321_94128_+|stage-0-sporulation-family-protein
MLSVVGVRFRQAGKIYYFDPGDLAIRKNQAVIVETVRGIEFGTVVIGIRHVSEEEVVLPLRRVIRTATPEDVEQMEKNLKAAGEALSICEEKIQNHGLEMKLVDAEYTFDRNKIIFYFTADGRVDFRELVRDLASVFRTRIELRQIGVRDEAKMLGGIGPCGRVLCCSSFLGDFEPVSIKMAKDQNLSLNPAKISGLCGRLMCCLKFENDTYVEAKQMMPDIGTRVTTPEGDGRVVVLNLLERRVQVELADSGRRVEHPAEVVKAQAR
>NZ_CP048103.1|WP_040387558.1|94213_94558_+|DNA-replication-initiation-control-protein-YabA
MDKRAILSRMTRIEDQIGELYKELGGLKLQIVQMLEENTRLVLENEALKEQLEQKQTGKPEPDSQETAGEGHDNLARLYHEGFHICNVHYGSMRGDGDCLFCLSFLNKTSQEDD
>NZ_CP048103.1|WP_009710732.1|94594_94891_+|GIY-YIG-nuclease-family-protein
MEMKRSVERNYVVYILECGDGTLYTGITNNLKQRLMHHQQGTGAKYTRGRGPFTLKWLETGITRSQALRREREIKKMSRTKKLELIQRRPAGEATKEF

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Crispr_ID: NZ_CP048103_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_2

433111-433191

Orphan

Consensus_repeat	Method
CCCGGTCTCGCTATGCACTCACCAGTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_2

>merge|NZ_CP048103|2|433111-433191|CRISPRCasFinder
CCCGGTCTCGCTATGCACTCACCAGTAGAAAGTCTCGCCAGGGTCGCTTCGCTCCCCGGTCTCGCTATGCACTCACCAGTA

>NZ_CP048103|2|2|433111-433191|CRISPRCasFinder
CCCGGTCTCGCTATGCACTCACCAGTA	GAAAGTCTCGCCAGGGTCGCTTCGCTC
CCCGGTCTCGCTATGCACTCACCAGTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_009711132.1\|449618_450086_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|376377
NZ_CP048103.1\|WP_076526298.1\|436711_437404_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP048103.1\|WP_009711111.1\|423631_424372_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP048103.1\|WP_009711120.1\|431953_432829_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP048103.1\|WP_076526296.1\|437400_438186_+\|carbon-nitrogen-family-hydrolase	unknown	unknown	gnl\|CDD\|143607
NZ_CP048103.1\|WP_009711118.1\|428529_429741_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP048103.1\|WP_076525629.1\|447929_449165_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP048103.1\|WP_172998889.1\|441728_442001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_009711115.1\|426430_427396_-\|pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|107205
NZ_CP048103.1\|WP_084190216.1\|438196_438901_+\|DUF2848-domain-containing-protein	unknown	unknown	gnl\|CDD\|371339
NZ_CP048103.1\|WP_076526292.1\|440287_441520_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|290220
NZ_CP048103.1\|WP_009711117.1\|427551_428526_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP048103.1\|WP_009711122.1\|433661_435188_+\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_CP048103.1\|WP_172998887.1\|429721_431431_+\|transglutaminase-domain-containing-protein	unknown	unknown	gnl\|CDD\|376628
NZ_CP048103.1\|WP_172998888.1\|431381_431936_+\|DUF4129-domain-containing-protein	unknown	unknown	gnl\|CDD\|379261
NZ_CP048103.1\|WP_009711127.1\|438929_440153_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|224826
NZ_CP048103.1\|WP_084190217.1\|424496_425165_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387619.1\|425921_426161_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_159439745.1\|435240_436548_+\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP048103.1\|WP_009711113.1\|425246_425681_-\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_009711111.1\|423631_424372_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	2.99969e-105
NZ_CP048103.1\|WP_009711120.1\|431953_432829_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	2.97364e-87
NZ_CP048103.1\|WP_076526296.1\|437400_438186_+\|carbon-nitrogen-family-hydrolase	gnl\|CDD\|143607	cd07583, nitrilase_5, Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.	5.04922e-140
NZ_CP048103.1\|WP_009711118.1\|428529_429741_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	1.8995e-39
NZ_CP048103.1\|WP_076525629.1\|447929_449165_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	3.39455e-129
NZ_CP048103.1\|WP_009711132.1\|449618_450086_+\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|376377	pfam00731, AIRC, AIR carboxylase. Members of this family catalyze the decarboxylation of 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR). This family catalyze the sixth step of de novo purine biosynthesis. Some members of this family contain two copies of this domain.	3.4321e-85
NZ_CP048103.1\|WP_009711115.1\|426430_427396_-\|pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|107205	cd01562, Thr-dehyd, Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.	3.73114e-153
NZ_CP048103.1\|WP_084190216.1\|438196_438901_+\|DUF2848-domain-containing-protein	gnl\|CDD\|371339	pfam11010, DUF2848, Protein of unknown function (DUF2848). This bacterial family of proteins has no known function.	4.56701e-82
NZ_CP048103.1\|WP_076526292.1\|440287_441520_+\|hypothetical-protein	gnl\|CDD\|290220	pfam13485, Peptidase_MA_2, Peptidase MA superfamily.	4.91141e-05
NZ_CP048103.1\|WP_009711117.1\|427551_428526_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.50268e-105
NZ_CP048103.1\|WP_009711122.1\|433661_435188_+\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_CP048103.1\|WP_172998887.1\|429721_431431_+\|transglutaminase-domain-containing-protein	gnl\|CDD\|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	2.48512e-29
NZ_CP048103.1\|WP_172998888.1\|431381_431936_+\|DUF4129-domain-containing-protein	gnl\|CDD\|379261	pfam13559, DUF4129, Domain of unknown function (DUF4129). This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.	1.86163e-07
NZ_CP048103.1\|WP_009711127.1\|438929_440153_+\|divalent-metal-cation-transporter	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	3.03062e-68
NZ_CP048103.1\|WP_076526298.1\|436711_437404_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.6411e-42
NZ_CP048103.1\|WP_159439745.1\|435240_436548_+\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	1.04919e-158
NZ_CP048103.1\|WP_009711113.1\|425246_425681_-\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	6.52876e-22

>NZ_CP048103.1|WP_009711120.1|431953_432829_-|cation-transporter
MSNRAETGVWVSLIAYLLLSTTKVGLGYWLSSQALTADGLNNVTDVLAAGGVLIGLRIARKPRDEDHPYGHSRAESISALIASFIMATIGLEVLQSGIRTAWKGTASPPDLWAAWIALGCAGVMFAVFGYTRHLAHRTRSSALSAVSKDNLSDAMVSIGAAAGIIGSQWGMPWLDPAAAIIVGLIILKTAWGIFKEMSHLLTDGFHEGELSRYRDTMEEVKGVKSVVDLKGRMQGNEVILDAVIEVDRELTVEESHRITELLEAEMARRHQVRQTHIHVEPDGSPDSSSDH
>NZ_CP048103.1|WP_172998888.1|431381_431936_+|DUF4129-domain-containing-protein
MNPPRASPTPPPVMEDERGADAGASEGEEQGTATNREQRLNRMERELARTGGETEGGSPQGSWDWKMGLAWIGGSLVVAFFLLRMLRRRIAWMVLDRRNRKNRDLVDAFHGFLRWLAWSRGPRKPHETVREYLFQRDPFSQASPELRRLSQAYEAVRYGGVRGGKAGLDRIRELWQRVLKQFRP
>NZ_CP048103.1|WP_172998887.1|429721_431431_+|transglutaminase-domain-containing-protein
MAKARPDSRSPLSPAARVGGFLFAFLIGWECLLPLVQVLESGRVGGFLAAFLFFLVITFVGGNRWITVPLRLLLLPVFLHPLLFHQMPWEDPAWIQLAVSHLITDLEHLFTGEVVPAPVLQTLGFLLMLWLIASGYRRFQERGGGVLVLFLAAVIHLSILDSFTSFDGGWAIVRVLVYGFIALSASRLVGLRSKTAGDPPKPGGWVPLTLSLLLLALGVGWVAPKPEAGWPNPVEWIASQDDRAQGRKIAKIGYGNHDQQLGGPFKQNSSPILFATVDVPYYWRGETRDFYTGKGWQSTLKKTPVDPVKPDRGESELQSGFEGIAVKKNDSIVMVERKYPVLFTPGWLRWVEGINADNRWEQIPEMGGLTTPDDEWPARYRLRTEIPVIDEDQLRQTGTEYHDLGEAGNVYLQLPESLPDRVRQKAEELTRGEDNPYDRAAAVENWLRSGGGFRYETEDIPVPGQREDFVDQFLFDSQRGYCDHFSTSMVVMLRSVGIPARWMKGFAPGEGEMVEVDDPKQKGKTVTEHRITVRNSDAHSWVEVYFAGVGWIPFEPTPGFANPTPRHGG
>NZ_CP048103.1|WP_009711118.1|428529_429741_+|DUF58-domain-containing-protein
MRRRGHGFVWGLTVIAYVFGRFQGGFVPWFLFYASLVISIYITSVVWFSLREPEVKRRLSVHRLTAGERLTVRLRYRWHAPLPPSWIYFKDEGDLKPREGMGWLRFPGWSREGVFEYVLRDLPRGRHRFQGVEIKSGDVFGLVEKKWDISLLEEIVVYPRIREIRVWQPLNEQNTGRSTSTLRVGEDVTSVVGVREYSQRDPLSRIHWKATARGQGLKAKEFEHQVSNDFMFLLDCRDSSFAGKGDPLFERSVSLTASLARYAVSRRFSAGLIAWGNRRLHLPTGRSQEHLLRLFEPLAVIQPEGEIAVGELLLRESVHLPRGTTTVVITPGLTSSDVRAIGLLVLRKIKVEVFWVCHPDSWEEKERSAVGMLDSLGVRVHPVPHDDFGKITEGGVSFGQGSA
>NZ_CP048103.1|WP_009711117.1|427551_428526_+|MoxR-family-ATPase
MNWNTEADALDREHPGIAKVVANVEKVMIGKREPIQMCLVALLCGGHVLLEDVPGVGKTMLVRALARSVGCGFSRIQFTPDLLPSDVTGVSVFNQQTSQFEFRPGPVMSQVVLADEINRTSPKTQAALLEALEEGSVTVDGDTYELEKPFFVMATQNPIEYEGTFPLPEAQLDRFLLKLKLGYPDHREEMEMLDRIREHHPIDDLGEVLSREELINLQREVRRVRVDPSISDYIVRIVRATRNPEEVYLGASPRGSIALYQTAQALAWVRGRPYVIPDDVKKLVPLTLSHRIILKSEARLSGRSVEQLLQELLRRIPVPVSVGD
>NZ_CP048103.1|WP_009711115.1|426430_427396_-|pyridoxal-phosphate-dependent-enzyme
MQPTLNFQEILSAEKQLAGVSHQTPVLTSRTLNQRAGCEVWLKCENLQRMGAFKFRGAYNRISRLTEEQKRRGVIAFSSGNHAQATALAAGLLGVPAVLCMPMDAPGVKVDATREYGAEVIFYDRFKEDREEVATRTATDRSLTLIPPYDHPHIMAGAGTAALELLREVPDLDSVIAPVGGGGLLSGTSVAAKGVRPQICVFGVEPETADDTRRSLQAGKRIAIPAPHTLADGLRVTIPGEATFPVIQQHAEKIVTVSEREIRAALRFALFRMKLVVEPSGAVPLAALLFRRLPRNLRRIGVIISGGNIDPSVLAEISQGE
>NZ_CP048103.1|WP_040387619.1|425921_426161_+|hypothetical-protein
MGKFEQVASLSSDIQDLCKSPREGEKPETKLIEMLVEIAKGTRYWDDVEAAVNAYEAYHRDQSEREKHVYKPKRLPWRV
>NZ_CP048103.1|WP_009711113.1|425246_425681_-|Hsp20/alpha-crystallin-family-protein
MKKDSYDWSNVQGKVGGVFGDKFWNELHQALPRRGPGVDIYETEREGVIVVEIPGLSSPNDIQITLESQNLILQGEIPYGYPVPKEKIALGERRFGRFKRRIQLPFHYSPDRIQASYKSGLLEIRLLKEMVGKEVEVRFEEESS
>NZ_CP048103.1|WP_084190217.1|424496_425165_+|hypothetical-protein
MLEWIATHRWWFLIAVEVSFWVLIIGFLVMRYGFGIRSHRVFLWLLALNLLSFLALGIIDYRETGQFSTFQVVVVVALLYSITYGPKDLKRLDRYIRLKMARWKGESLPPEEEARLREEREKEEKKNYGRLHARGQRRGWYLHLLLFLIAHFVFAYLFGWKPASGVGGWVETWIDSWNTPELFPFRKEEVNQISRIWTLILLIDGINSFYYTIFPKKKKKTD
>NZ_CP048103.1|WP_009711111.1|423631_424372_+|ABC-transporter-ATP-binding-protein
MGEMMLIVMEGLCKRYPSGERPVVDGVNLHVEQGEFVAVMGPSGSGKSTLLNLMGGFDSPDQGKVCVDGLSLYDLSEKRRTLIRRRKIGFVFQNYNLIPTLNVRENIAFPMAVDRCPREEIQMRVKQLVQDLELEGKEESFPAELSGGQQQRVAIARALSMQPRVILADEPTGNLDRRRSREVLEILSRLHRKERLTIVMVTHDLSAAGYAERILLYKDGRIESDIRQSAGDLQHVLEDFLTILRT
>NZ_CP048103.1|WP_009711122.1|433661_435188_+|glutamine-hydrolyzing-GMP-synthase
MEQVVVLDFGGQYNQLIARRIRDLGVYSELLPPHTDAERLKKLAPKGIVFSGGPASVYAEGAPKCDPAIFELGIPILGICYGMQLISAHFGGEVKRAEKREYGKADVEILSDSPLFQGPGTRESVWMSHSDVVTAPPRGFQVDGRTASAPVAAMSDPDRRIHAVQFHPEVRHTQHGDEMIRSFLYEVCRCEGNWSMETFIGDTVRELQEKIGEKRVLCALSGGVDSSVVAALIHRAIGDQLTCVFVDHGLLRKGEADSVMGTFADHFHMNVVKVDARERFLSKLKGVTDPEKKRKIIGNEFIRVFEEETEKLGKHDFLAQGTLYTDIVESGTETAQTIKSHHNVGGLPEDMQMDLVEPVNTLFKDEVRKVGEELGLPREIVWRQPFPGPGLGIRVIGEVTEEKLEIVRESDAVLRDEIQKAGLDSEIWQYFTTLPDFRSVGVMGDARTYAYTVGVRAVTSIDGMTADWARIPHDILERISNRIINEVDGVNRVVYDITSKPPATIEWE
>NZ_CP048103.1|WP_159439745.1|435240_436548_+|NCS2-family-permease
MARYFRFGQHGTNLKTEILAGITTFLTMAYVLLVNPFLLGKEAGMDFGAVFVATAVAAAIGSLLMGLFANYPIVLAPGMGLNAYFTYTVVLGMKVPWQTALGAVFISGLIFLLLTVTKVRELIINSIPPVLKHSVSAGIGLFIAFIGLKNAELIVANKATYISLNSDLMQPEILLTIFGLVLTLFLMVRRVKGAVFFGMIGTAVVGMITGVVEIPTQFFSAPPSLAPTFLKMDIVGALDMGFFAIIFAFLFVDLFDTAGTLVGVANQAGLLKENRLPRAGRALTADSLATMSGAALGTSTVTSYVESTAGVATGGRTGMTAVTAAALFLLALFFFPLVETFASVSAITSPALIIVGVLMASSLKEIEWKDLSEGAPAFLTVLMMPLTFSIATGIAIGFILYPLIKMFAGKARQVHPILYVLAVIFIARFVFLGSI
>NZ_CP048103.1|WP_076526298.1|436711_437404_+|GntR-family-transcriptional-regulator
MPELDIGSVIKKETMHQAAYKQLKHAILSGKLTPDHFYTETDFAHVLNISRTPVREAVKDLIHDNLLLSVPRKGLKVREFTESEVEQIFLVRKAIESQVIGQLLKTVTEERISFLENLVEDQKRAIETDDRIAFIRLDQKFHHQMIRFVHYELIEELIIKLHNLTRLIGHQAIKKQGRREEVIREHQEILESLKRGDSDQAKQAMVTHLENTQQSYRMVKTKSDDRRDSK
>NZ_CP048103.1|WP_076526296.1|437400_438186_+|carbon-nitrogen-family-hydrolase
MKYAIYQMNIAVGDPEKNRSKVRAWLDRVAKAEKPDVVVLPEMWTTAYTLPRLEEVADRNGEPTLPFLQSLAKEYGVHMIGGSVANNKGQGFYNTAFVVDRNGTLIHQYDKIHLVPMLDEPRYLKGGEKGVEVFELDGVKMGLIICYDLRFPELARKLALEGVEVLHVVAEWPTARLDHWKTLQVARAIENQMFVVSCNSVGLQDGVEFAGTSMIIDPWGNVMEAGGDDREETLTGELSLELVSKVRKDVPVFDSRMPELY
>NZ_CP048103.1|WP_084190216.1|438196_438901_+|DUF2848-domain-containing-protein
MEAVQLENKLILNIQGTDETIELIVNRVFNAGYAGSDQEKVQEHIDELAELGVPVPTTTPTLYPIADYLPTTTDRIQVQHQETSGEIEYVLIRAKGEWFVTVGSDHTDRKLETFSVPMSKQAYPNIIAEDVWRLEDVKDHWERLELECWVTAEGERQLYQKGSCADLMTPGQWKDIFEQMNVADEGNLFFSATINTVAKSLTFAEKYEFEMRDPVLNRVIKHQYRVDMLSAPIE
>NZ_CP048103.1|WP_009711127.1|438929_440153_+|divalent-metal-cation-transporter
MNQLNTSSGSVTKANKRLMWGAVFLMATSSIGPAFLTQTAVFTEQFAANFAFAILASVIIDIGAQLNIWRIITVSGKRGQDVANMVLPGLGSVIAVLIVFGGLAFNIGNVAGAGLGLNVLFGISPVVGAVITGILAIIIFSLKDAGKAMDLVAQALGILMLVMVGYVMFTTHPPAGDALVKSILPDDYGVLLLPMITLVGGSVGGYITFAGGHRLVDAGVTGKENVSFVSKAANLGVLTTGVMRVFLFLAVLGVISAGYSLDPGNPPASVFQIALGDVGYKIFGIVLFSAAMTSVIGCAYTSVSFLRSFHRSVEKYNNWIIIAFIAFSTLIFAVVGKPVNILVIAGSLNGLILPLTLGSILLASRKRKIVGDYHHPTWMILFGFLAVVVTLIASWYSLQGIADLWNK
>NZ_CP048103.1|WP_076526292.1|440287_441520_+|hypothetical-protein
MIRKGRALVLMLLLMIGTVLPGWVFPSFGLSQRVHGSEPEAQVQIRHLIEEKQNAVNQRERERFLRLLHPDMKTYIQEQKRWFDDTVQWIDPGSYRLRVISMIPWAEHQIRVWMEQCYTRKGKRFTLKYPVLFQETAAGWRDADFPLHHLTRGDVTVRYSDTGLAEQAAIALETGHKAIQELKRKMGWMPKRPVEVKIYHRPEWFRQSVKLSLPRWAGGWHEAGESIKLIGARGVEDRQLVSSGIVHEVTHLMVSEMTGDNAAYWLQEGAAEYFQSHLLPGLHSREESSGERPRWSLSQLKKANLEQMGEKEAAAYYTQCYQLFRFLMETYGEEKVKRLFSVLQLSPEEDRDIVGKLSLTNRRTEAALKKVLGKSLKELEKDWLQHLKKEKRKDSPHPPDQKMDPFTWSF
>NZ_CP048103.1|WP_172998889.1|441728_442001_-|hypothetical-protein
MTGSFFRSSVFKERSISLFLPLGEASASLAATRTILSCSVVPVNSFFIFTRVSSDPAGQADLAATDINLPRTPSFVNTFFGDLNPKLSTQ
>NZ_CP048103.1|WP_076525629.1|447929_449165_+|dicarboxylate/amino-acid:cation-symporter
MKITTKTFLGIILGLVVGLVLNQFYPEAFKVLNTWLFAPIGDLFIRAIKMIVVPLVFFSIVMGAAGIGNPKKLGRIGGKTVFLYLITTAIAITIALLLANAIGPGEGVHVAKPEKTDIEAAPPVVETLMNIIPDNPIKALAEGEMLQIIFFALAFGIGIALLGDKVARVKEVVEQANEVMMKLVNMLMTVVPYAAFALMAKAVGEAGLEMIGSMGMYMITLLLALVIHASLIYSLFLKFWAKISPIKFFKTMFPAMEVAFTTSSSAAALPVTIEQVERGLKVPKGISSFVLPLGATINMDGTAIMQGVASIFIAQVYGIDLTFTQQLLIILTATLASIGTAAVPSAGIVMLTMVFPVVGLPLEGLGIVLGVDRLLDMSRTAINITGDAMVAACVARSEGEDAGDQAAPQSA
>NZ_CP048103.1|WP_009711132.1|449618_450086_+|5-(carboxyamino)imidazole-ribonucleotide-mutase
MGSTSDWPTMGKVCEVLEELEIPFEKRVVSAHRTPDEMFGYAESAQERGLEVIIAGAGGAAHLPGMVAAKTVLPVIGVPIKSSALNGLDSLLSIVQMPGGVPVATVSIGEAGAVNAGLLAAEMVGIKRPELQKKLVERREEIRRRVWEQSILGEG

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP048103_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_3

561012-561088

Orphan

Consensus_repeat	Method
GGCACGACTTGTGCCCTATGGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_3

>merge|NZ_CP048103|3|561012-561088|CRISPRCasFinder
GGCACGACTTGTGCCCTATGGGTGCATAGCGAGACCGGGGAGCGAAGCGACCCTGGCACGACTTGTGCCCTATGGGT

>NZ_CP048103|3|3|561012-561088|CRISPRCasFinder
GGCACGACTTGTGCCCTATGGGT	GCATAGCGAGACCGGGGAGCGAAGCGACCCT
GGCACGACTTGTGCCCTATGGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_159439719.1\|559884_560025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_009711243.1\|554157_554676_+\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP048103.1\|WP_076525735.1\|560009_560864_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|319742
NZ_CP048103.1\|WP_040387644.1\|559225_559420_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387647.1\|566815_568561_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048103.1\|WP_009711257.1\|562309_562528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526324.1\|563475_563712_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_052528860.1\|558150_559068_-\|aminoglycoside-phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|366736
NZ_CP048103.1\|WP_076525729.1\|555476_555953_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048103.1\|WP_076525733.1\|557168_558128_+\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_CP048103.1\|WP_076526332.1\|568575_570381_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048103.1\|WP_159439718.1\|555990_556149_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076525727.1\|554806_555382_+\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP048103.1\|WP_009711261.1\|565985_566192_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076525755.1\|561199_561841_+\|hemolysin-III-family-protein	unknown	unknown	gnl\|CDD\|224191
NZ_CP048103.1\|WP_159439720.1\|561930_562107_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526326.1\|563708_565448_-\|sulfate-permease	unknown	unknown	gnl\|CDD\|183265
NZ_CP048103.1\|WP_076526335.1\|570389_570851_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340887
NZ_CP048103.1\|WP_076525731.1\|556298_556925_+\|SCO-family-protein	unknown	unknown	gnl\|CDD\|239266
NZ_CP048103.1\|WP_076526337.1\|570886_571216_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_009711243.1\|554157_554676_+\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	4.77366e-86
NZ_CP048103.1\|WP_076525735.1\|560009_560864_+\|hypothetical-protein	gnl\|CDD\|319742	cd16443, LplA, lipoate-protein ligase. Lipoate-protein ligase A (LplA) catalyzes the formation of an amide linkage between free lipoic acid and a specific lysine residue of the lipoyl domain in lipoate dependent enzymes, similar to the biotinylation reaction mediated by biotinyl protein ligase (BPL). The two step reaction includes activation of exogenously supplied lipoic acid at the expense of ATP to lipoyl-AMP and then transfer to the epsilon-amino group of a specific lysine residue of the lipoyl domain of the target protein.	1.36782e-35
NZ_CP048103.1\|WP_076526324.1\|563475_563712_+\|hypothetical-protein	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	0.00222293
NZ_CP048103.1\|WP_052528860.1\|558150_559068_-\|aminoglycoside-phosphotransferase-family-protein	gnl\|CDD\|366736	pfam01636, APH, Phosphotransferase enzyme family. This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881.	9.71045e-21
NZ_CP048103.1\|WP_076525729.1\|555476_555953_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.92931e-21
NZ_CP048103.1\|WP_076525733.1\|557168_558128_+\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	3.92169e-122
NZ_CP048103.1\|WP_076526332.1\|568575_570381_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP048103.1\|WP_076525727.1\|554806_555382_+\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	9.36075e-45
NZ_CP048103.1\|WP_040387647.1\|566815_568561_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP048103.1\|WP_076525755.1\|561199_561841_+\|hemolysin-III-family-protein	gnl\|CDD\|224191	COG1272, COG1272, Predicted membrane protein, hemolysin III homolog [General function prediction only].	3.91806e-53
NZ_CP048103.1\|WP_076526326.1\|563708_565448_-\|sulfate-permease	gnl\|CDD\|183265	PRK11660, PRK11660, putative transporter; Provisional.	1.58886e-174
NZ_CP048103.1\|WP_076526335.1\|570389_570851_+\|hypothetical-protein	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.52339e-10
NZ_CP048103.1\|WP_076525731.1\|556298_556925_+\|SCO-family-protein	gnl\|CDD\|239266	cd02968, SCO, SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properties of Sco1 implies that it participates in signaling events rather than functioning as a chaperone that transfers copper to COX II.	1.22053e-39

>NZ_CP048103.1|WP_076525735.1|560009_560864_+|hypothetical-protein
MEDLLRQAEARFREVKPWRVLYEPGGEGSLPYAMEEAIGESVARGEAPATVRIWQGPRALVVAKKDLRTWQAVKAARMMKEVDWPVYVRQSGGTAVPHGPGTLNLSLFLPRPKEMKWNIDDIYRLLGAPLIRMLERSFGLEPYFGEVPGSFCDGRYNVVVRGKKIVGTSQIWKGGPAGLRSKRPGYILAHATLLTWIDREQAVSALNAFYEMAEGTRPVYIDTVATLASLVSSTPEEAGRLAAEGLLEVIGEWTGVRERELPTEKERMAARAYLDRSLPESYGE
>NZ_CP048103.1|WP_159439719.1|559884_560025_+|hypothetical-protein
MAGSKLLQEHVGGGAGFLPIPPLLPIIGYNGQDVTGTEGWERWKIC
>NZ_CP048103.1|WP_040387644.1|559225_559420_+|hypothetical-protein
MDGMKVEMNLSGEEWRAALSCIERRYNELKRKLAEGERMGRSIRYYREESLLLERVLDELKNQE
>NZ_CP048103.1|WP_052528860.1|558150_559068_-|aminoglycoside-phosphotransferase-family-protein
MTRDDFSMEEISRWITGITGGWAPEAAFEELPGATSSVLYRVKPEGQSGERPLVLRLFTNREWLEEEPELPLHEVSALGAARKIAVTAPRPVAVDRSGTACGIPAVLMTEVPGAVNLQPDHLSHWLKKMAWTLSSIHEGEVGEFPWEYAPWYELTDLKPLEWSRHRKRWDRVLTLLAEGRPGRTAFIHRDFHPANILWEEDRVSGVVDWVNACRGPAEADVAHCRINLALLMGLEAAESFSQAYEQFSGHKYDPWWDLNAFAEFFPDRPVVYPGWPAFGVHHLTDRVMVERADLFLEAALAHMKE
>NZ_CP048103.1|WP_076525733.1|557168_558128_+|zinc-ABC-transporter-substrate-binding-protein
MNRRIARIGILFILFALVVSGCGESGATSGPEDGKLKISASLYPLAFFAEEIGGEHVTVTHLVPPGVDAHDFEPTPKDVVKMADSDVLLYNGIGLEGWVDQVKSSLEGNTLIVNASKGVPLIKTDPHEEHGHDEHEKDHAHEHGNQDPHVWLDPVRAKQQAANIKNALVEKDPKQRGDYERNYDQLAQRLDHLHQQFKETVNKAEGKSFVVSHAACGYLADRYGLNQISVSGLSPSEEPSPKKLREVVKTARKHRVKYILFETLVSSKVAKTVQKEVGARPLTIHPLEGLTQQEKSRGENYFTLMEKNADHLGKALETK
>NZ_CP048103.1|WP_076525731.1|556298_556925_+|SCO-family-protein
MKNLWGRRTKILGLVALLLAVVGWMRWNPDPPSHPPDPVGVLSSPVPEFTFTDQKGKAFGFKDLKGKVWIADMIYTRCPGVGSPMTANMVRLQERLKKEGLAVQLVSFSIDPMYDSPAVLERYGKNLRADFENWKFLTTPSEPVMHRFLQTAFGSPISRKTEVEEEEEPLISHSSCFYLVDGRGKVISAYNGIRPDYGQIIRDVRSIQ
>NZ_CP048103.1|WP_159439718.1|555990_556149_-|hypothetical-protein
MPTNDERHRSPMVEPAAGKKRADTDDPVDPRRKTAKEPFPETAPWQTPRSEK
>NZ_CP048103.1|WP_076525729.1|555476_555953_-|GNAT-family-N-acetyltransferase
MFQLRQLLPSDYPAVISVLNLWWGGRHMTDMLPKLFFHHFHNTSLIMEKEGQPVAFLVGFVSPARSGEAYVHFVGVHPDYRRQGLAGQLYQRFFDAVSKEGCRRVRCLTSPSNRRSIRFHTRLGFQLIPSETLREGVPVHKDYDGPGRDRVLFVKELD
>NZ_CP048103.1|WP_076525727.1|554806_555382_+|RNA-2',3'-cyclic-phosphodiesterase
MGSNPVHRLFIAIPLPDAQKEMLARQCESWATQWSFKKWVHPSDYHLTVQFLGACTFCQARDVQQTLKKLSPHLRPFRLALDGIGQFGVPTRPRILWAGVEGDLEQLHLLYSQVIQAVEPLGFPREKRPYRPHITLAKKYRLNDFPHQSMGRHFQPHPDRSQWTVEELVLYETHIYRSPMYQPRAVFRLGE
>NZ_CP048103.1|WP_009711243.1|554157_554676_+|thiol-peroxidase
MAEERQGAITFKGNPVTLLGPELKPGMTAPDFSALANDLSPVTLGDSNGFVRIFSVVPSLDTGVCDAQTRRFNEEAVNLGDRVKVITVSVDLPFAQQRWCGAAGIDRVQTVSDHRDLSFGTAYGVAIKELRLLARAVFVVDASDKVVHVEYVSEATQHPDYEAAVEAAKKAL
>NZ_CP048103.1|WP_076525755.1|561199_561841_+|hemolysin-III-family-protein
MKEPVNTWTHFVTFLAGIVGLVFLILLSREQLSALVTMTIYGVSVILLYGASSLYHWVRTTPEKEMILKKLDHIAIYLLIAGSYTPVFYYGLEGAWKWVMLTAVWVLALIGMILKIWFIHAPRYVSTAFYVTLGWIALIPLVQLIHSLPVGALVLMVAGGVAYTLGAVIYATKWCDLFPNRFGFHEVFHLFIMAGTGLHFAMMVAYILPMGVK
>NZ_CP048103.1|WP_159439720.1|561930_562107_-|hypothetical-protein
MVQDLGAAVGPVFAYAMIGLPIGMTGVYLVGALALLCLAFLPGPRLQTNSCTRPPDSR
>NZ_CP048103.1|WP_009711257.1|562309_562528_-|hypothetical-protein
MIQHQGETYYSKDVFFQTDGYPTPDARDTGEKASQDAGMLASGRIFKDLKTGELFVEDKSVKPSRWILYSKK
>NZ_CP048103.1|WP_076526324.1|563475_563712_+|hypothetical-protein
MIQSVRWWRVRVAMWVPEMVVREELRKGRWRPAHVEGISFRRPISLCFREGAELFPLRQNFGNGGRRKAGRELLKSVR
>NZ_CP048103.1|WP_076526326.1|563708_565448_-|sulfate-permease
MLADERFHRYQFPDVKRDLMAGITVGIVALPLAMAFAIASGVKPEYGIYTTIIAGLIVALLGGSRFQIAGPTGAFVPILLAVVLQHGYEDLLIAGFLAGILLVVMGLFKLGNLIKYMPRSVTIGFTSGIAVIIFTGQIANFFGLRGVEKKEAFHENILELIQRFPTVNSYSLLTAVIGLLLLIIIPKIAPRLPVLLLALVIPTLISVLFYPDQVESIGSAFGGIPQGLPTFHFPEITPDKIMKLLPSAFVIAVLGGIESLLSAVVADGMTGKRHHSNRELIGQGVANLVTPLLGGIPATGAIARTATNIRSGAVSPLSGVFQSLFVLIILLVFAPFASYIPLASMAPILMVVAWNMSEQKAFMHILKLRSGDSLVLVTTFLLTVFVNLTVAVQVGLLLAMVSFIKRMGNQLEVEKVLPDQPHGEQVSPHPVNAGRHCPQLSIYTIEGPLFFGAADRFERTLTRSIHHRPKVLLLRMRLVSLIDATGESHLSSLVSDFQQQGGVVLISGIRKQPLEMLKKSGLYGKIGPEHFFPRTGMALRHGLTLIDREKCGSCRHSAFRECEGWHKSRETKREMAVPD
>NZ_CP048103.1|WP_009711261.1|565985_566192_-|hypothetical-protein
MQVEQFLQERNLTPQKFKQDVLRYLEQGLTMEDIALIYQIKLVHLLQYTRILGVFKVSSARASSNSQT
>NZ_CP048103.1|WP_040387647.1|566815_568561_+|ABC-transporter-ATP-binding-protein
MNTFKRLKSFYWPYKGRFLLSIGALILVTGITVVYPLVLKLTIDEVIGKGKYEWVPWIAGGFLLLMTLKAVAVFFHQYHGDLFGIQSVYELRNALYKKLEALPFRFYDNAKTGDLMSRLTADVEAFRFFLSFGCAQFINFLLLLTLGLGIMMVLNLKLALVTLLAMPFLAVTVYRFDQKVHPAFKNIRRSFAQLTTKVQENISGIQTVKAMAREDFEIGQFNRRNEQYKQTNVETGYIWGTYFPLMELIGNIAVVALLGYGGWLVLRGELLLGELVAFFSLIWYIIGPLMFLGFTINTYSQSKAAGERLLEILDEPEEIQSGSGAIVQERLKGDVQFRSVSHRYPGKEEWALRGVDLDAPAGKVIGLIGATGSGKTTITQLISRFYEATEGEVLIDGRRVQDFDLRCLRQNIGVVFQESFLFSSTIRDNIAYGNPEVSMDEIREAARRAQAHDFIESFPRGYETMLGERGLGLSGGQKQRIAIARALVINPAILILDDSTSAVDMETEHKIQAAFREVMKGRTTFVIAHRISSVKDADEILVLDRGRVAERGTHAELLQQKGYYRRIYDIQFRDRHRVPVS
>NZ_CP048103.1|WP_076526332.1|568575_570381_+|ABC-transporter-ATP-binding-protein
MSRSKSRERFSYPGEVVIDKPFNWSLMTRLLTYVKPYTKKLLPLALAAMIVSTGARLFAPFMVSLAIDYALVDRDVPRLLLFAGVLITLYLLNWIGNMLRTRWMQVLGQSVIYDLREHLFRHIQRLSHRFFDQRSAGSILVRITNDINSLQELLTNGIINVFMDIILLVGIIIMLTVLSPSLTAAILVILPVMFLISVKLRRRIRRSWQKVRLKQSVLNSHLNESIQGMRVTQSYTQEEENMGFFTRLNRDNFNAWNEAAKKSATFRPLVELAGAIGTVILIVYGAALYQAGEITIGVFVAFAYYMGNFWEPISRLGQVYNQLLMAMASTERIFEFLDEKPSVPERAGAKPMERIRGHVELENVVFSYDGERKALKGICLEFLPGQKVALVGHTGSGKTSIVNLICRFYDPTAGCVKIDGRDLLDLKLDDLRSQVSIVLQETFIFSGTIRENIRFGRPGATDEEVEAAAQAVGADEFIRRLPQGYDTEVEERGNILSTGERQLLSFARTLLADPRIIILDEATASIDTETELRIQEAMQTLLAGRTSILIAHRLSTIRDADKIVVLQEGHIIEEGNHEQLMAERGEYFNLVTAQFRVLGAG
>NZ_CP048103.1|WP_076526335.1|570389_570851_+|hypothetical-protein
MEKTRPPNSGDVPLCLDIEGSNPFHVKLALNAGVVWSGFRWHHPPGEGRPILTQMTLGSLMFTLGLICRVIGGHWGWFVAGMIILTIGEILLFPSGSLFIDGLAPARMRGVAFAPSVSLSARPWAGGCRWAAASEPFSCWRGLSLWGCSSTGP
>NZ_CP048103.1|WP_076526337.1|570886_571216_+|hypothetical-protein
MKRLDSVLIGLLAASAVVFGVLDAAGVIALKPVYLLCYALAVAVIFIPGKGNTGRVIRLALLFLIFAAVPYGWEQWAFFRQGVDRFTPAVLAVVLGCSLFAYRRGKGGS

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Crispr_ID: NZ_CP048103_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_4

656762-656849

TypeV

Consensus_repeat	Method
TTCCGCATAGGTACGTTATAAAC	CRISPRCasFinder

1 spacers

cas14j

The CRISPR arrays of NZ_CP048103_4

>merge|NZ_CP048103|4|656762-656849|CRISPRCasFinder
TTCCGCATAGGTACGTTATAAACGCTCGCATGATTCCGGAAGATGCTGTAAAATACGCGTTTCAATTCCTCATAGGTACGTTATAAAC

>NZ_CP048103|4|4|656762-656849|CRISPRCasFinder
TTCCGCATAGGTACGTTATAAAC	GCTCGCATGATTCCGGAAGATGCTGTAAAATACGCGTTTCAA
TTCCTCATAGGTACGTTATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076525766.1\|665462_665900_+\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|227014
NZ_CP048103.1\|WP_076525772.1\|669030_669840_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|214854
NZ_CP048103.1\|WP_076525760.1\|660337_661636_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274531
NZ_CP048103.1\|WP_076525768.1\|665902_667057_+\|mannitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|235031
NZ_CP048103.1\|WP_076526529.1\|650332_651658_+\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_CP048103.1\|WP_076526535.1\|653061_653721_-\|DUF4272-domain-containing-protein	unknown	unknown	gnl\|CDD\|379466
NZ_CP048103.1\|WP_172998892.1\|658866_660000_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	cas14j	-	gnl\|CDD\|223747
NZ_CP048103.1\|WP_076525762.1\|661889_663323_+\|PTS-mannitol-transporter-subunit-IICB	unknown	unknown	gnl\|CDD\|225123
NZ_CP048103.1\|WP_076525764.1\|663351_665460_+\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP048103.1\|WP_076526540.1\|657064_658555_-\|amidase	unknown	unknown	gnl\|CDD\|180608
NZ_CP048103.1\|WP_143457201.1\|648272_649349_+\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|213783
NZ_CP048103.1\|WP_076526531.1\|652171_652519_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526527.1\|649341_650319_+\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_CP048103.1\|WP_009711357.1\|646150_646945_+\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|236163
NZ_CP048103.1\|WP_076526549.1\|655511_656693_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048103.1\|WP_076525775.1\|669866_671150_-\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP048103.1\|WP_076526533.1\|652733_652943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526537.1\|654546_655515_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP048103.1\|WP_084190235.1\|647079_648255_+\|amino-acid-dehydrogenase	unknown	unknown	gnl\|CDD\|133444
NZ_CP048103.1\|WP_076525770.1\|667637_668600_-\|sporulation-protein	unknown	unknown	gnl\|CDD\|369195

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076525766.1\|665462_665900_+\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|227014	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism].	4.94808e-60
NZ_CP048103.1\|WP_076525772.1\|669030_669840_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|214854	smart00849, Lactamase_B, Metallo-beta-lactamase superfamily. Apart from the beta-lactamases a number of other proteins contain this domain. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.	5.45954e-26
NZ_CP048103.1\|WP_076525760.1\|660337_661636_-\|hypothetical-protein	gnl\|CDD\|274531	TIGR03348, VI_IcmF, type VI secretion protein IcmF. Members of this protein family are IcmF homologs and tend to be associated with type VI secretion systems. [Cellular processes, Pathogenesis].	0.0057335
NZ_CP048103.1\|WP_076525768.1\|665902_667057_+\|mannitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|235031	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional.	0
NZ_CP048103.1\|WP_076526529.1\|650332_651658_+\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	6.10378e-157
NZ_CP048103.1\|WP_076526535.1\|653061_653721_-\|DUF4272-domain-containing-protein	gnl\|CDD\|379466	pfam14094, DUF4272, Domain of unknown function (DUF4272). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 221 and 399 amino acids in length.	2.53402e-40
NZ_CP048103.1\|WP_172998892.1\|658866_660000_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.79035e-50
NZ_CP048103.1\|WP_076525762.1\|661889_663323_+\|PTS-mannitol-transporter-subunit-IICB	gnl\|CDD\|225123	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism].	0
NZ_CP048103.1\|WP_076525764.1\|663351_665460_+\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	2.19663e-56
NZ_CP048103.1\|WP_076526540.1\|657064_658555_-\|amidase	gnl\|CDD\|180608	PRK06529, PRK06529, amidase; Provisional.	4.97823e-180
NZ_CP048103.1\|WP_143457201.1\|648272_649349_+\|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha	gnl\|CDD\|213783	TIGR03181, PDH_E1_alph_x, pyruvate dehydrogenase E1 component, alpha subunit. Members of this protein family are the alpha subunit of the E1 component of pyruvate dehydrogenase (PDH). This model represents one branch of a larger family that E1-alpha proteins from 2-oxoisovalerate dehydrogenase, acetoin dehydrogenase, another PDH clade, etc. [Energy metabolism, Pyruvate dehydrogenase].	1.60793e-173
NZ_CP048103.1\|WP_076526527.1\|649341_650319_+\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	1.36588e-176
NZ_CP048103.1\|WP_009711357.1\|646150_646945_+\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|236163	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional.	4.75669e-111
NZ_CP048103.1\|WP_076526549.1\|655511_656693_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	2.79755e-81
NZ_CP048103.1\|WP_076525775.1\|669866_671150_-\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	2.83896e-149
NZ_CP048103.1\|WP_076526537.1\|654546_655515_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	8.08881e-47
NZ_CP048103.1\|WP_084190235.1\|647079_648255_+\|amino-acid-dehydrogenase	gnl\|CDD\|133444	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts.	2.13822e-99
NZ_CP048103.1\|WP_076525770.1\|667637_668600_-\|sporulation-protein	gnl\|CDD\|369195	pfam07070, Spo0M, SpoOM protein. This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis.Spo0M exerts certain negative effects on sporulation and its gene expression is controlled by sigmaH.	5.58447e-59

>NZ_CP048103.1|WP_076526549.1|655511_656693_+|Gfo/Idh/MocA-family-oxidoreductase
MSKKQVRVGMIGYKFMGKAHSHAYRDLPFFFDTDVVPVQQALAGRDREGVEQAATQWGWASTETDWRRLLEREDIDLIDIVTPNHLHAEMAIAAAEAGKHVICEKPLAMSVDEARRMVEAVQKAGTVHMLCHNYRFAPAVQFAKKLIEEGRLGRIYHIRGQYLQDWIMDPQFPLVWRLRKEVTGSGALGDVGAHILDLARFLVGEFQEVSGMMETFIRERPLGEMSGGLNARAEAGNRGEVDVDDAAVFMARFENGALGVFEATRFAGGNRNGNRFEINGEKGSIRWDLENMNNLEVYLEEDEPGLQGFRTINCTEEHHPYGAAYWPSGHIIGYEHTFINLFSELMKGIADGSSPAPNFEDGLRNQLVLAAVEKSSRSGQWIKVSDLNPVTRR
>NZ_CP048103.1|WP_076526537.1|654546_655515_+|sugar-phosphate-isomerase/epimerase
MKLGVFAVLFGDKPLEEALDYIAESGLEAVEIGAGGFPGDSHCNPRNLLEDESRLNRFKQAVESRGLEISALSCHGNPLHPNPQIARRDHETFEQTVRLAARLGVENVITFSGCPGESEHSLNPVWVTCPWPDEFSSVLKWQWEEKVIPYWKEQDRFLKQHGVRVAIEPHPGFVVYNTETMLRLREECGDNIGVNFDPSHLFWQQMDPVAAIKELGKAGALYHFHAKDTGIDRQNTAANGVLDTKSYRDELNRSWIFRTVGYGHGEETWKQIISALQMVGYQGAISIEHEDSLMSVEEGFQKAVSFLKNLLIKERVGDLWWA
>NZ_CP048103.1|WP_076526535.1|653061_653721_-|DUF4272-domain-containing-protein
MLEHDLVRKQQSERMLREHGIPMDPGLKYVEDFQFRSPQEVARRALVLHALLGVIFYHRPLDVVEWVREEGLWEELTPREKEIFQIPLIEDEGERVWKLRRMQSNRITWRMEALWALLWSLGKIETLGWPSGQSNAEQVGNAVPQLGESTESFIENAEFRPLSEIADQADLMFRLFHGLQKAREENSEAPAGVEPFTVDEWHLALQWICHDWEWAETTG
>NZ_CP048103.1|WP_076526533.1|652733_652943_+|hypothetical-protein
MLDPSIIGATGAGFFMIGFFLLVDKIKGFPKGSYLIKDIPKGSDPIYYLSPLVLLVIGATLMLTGLIFR
>NZ_CP048103.1|WP_076526531.1|652171_652519_+|hypothetical-protein
MGNKKRKKMKELARQRKLQKERAVTNRKMKENLFYRIGSWVITTLLLLLKGMVMIVSAVFSLGSMAFQLLIILLLLILSFYLLYSLSTDDREGMFVSAAALLIWGSVWFLMRRTR
>NZ_CP048103.1|WP_076526529.1|650332_651658_+|2-oxo-acid-dehydrogenase-subunit-E2
MGVKFRLPDVGEGMTEAEVVRWLVREGETVASDQPVVEIQTDKAVVELPAPVPGKVGQIPWKEGDTVAVGEVLLVIDTDNESAHRETAAASEAAPAPEAKEESPSSLHHTLVEEETASPHRRRVLAAPSTRRLARDLGVEIQQVTGTGPGGRVTKEDVRKVAASLAESHGVIRFADRVARAAKKGSPADPDDTGVSSGGETEKAGDTGTITEEPLSPTRRVIADRLLFSVTRKPHATHFDELEAEGLVAWRHRLKEETGSGASPVGYLPILLKATAVALKRHPLLNAHFDEEKMTVRRFSPIHLGVAADTPRGLLVPVIRDVDRKSILQIADELRELTEAARLGRLMPDRMKGSTFTVSNAGALGGHFATPIINPPEVAILALHPVEQRPVVRDGELVPGWRMNVSLSFDHRILDGADAIRFTQTLGSYTADPGRLLLELT
>NZ_CP048103.1|WP_076526527.1|649341_650319_+|alpha-ketoacid-dehydrogenase-subunit-beta
MAEKTLIQGINDGLRTALGQDAEVVVLGEDVGKNGGVFRATEGLWEEFGDERVIDTPLAEAGIVGAAVGMAVNGLRPVAEIQFMGFIYPAFEQIVTHVARLRTRTQGQYPASLVIRAPYGGGIRAPELHSDSTESFFVHTPGLKVVVPSTPSDAKGLLLAAIRDPDPVIYLEPMKIYRSFREEVPEGWHEVPIGKARKVRAGDDVTLIAWGAMVPVAQRAAHSCAERGISCEVLDLRSLYPLDEEAVIASVKKTGRAVIIHEAPKTAGLGAELAARIHELAFLWMEAPVERVTGYDVPVPMFALEDDFRPGPGRIEAAVQKVIHF
>NZ_CP048103.1|WP_143457201.1|648272_649349_+|pyruvate-dehydrogenase-(acetyl-transferring)-E1-component-subunit-alpha
MKLMDRVDRQYILPDGKLSPEGRQAWGKLPKERKLDFHRWMVQVRTFDRRAVILQRQGRIGTYAPLEGQEAAQVGSALALSQEDWIFPSYREHGVAMIAGMPLSQILLYWMGRVEGNLAPPGVRLLPPYVPIATQMPQAMGAAWASRLKRESAISVAYFGDGATSEGDFHEACNFAGVFRLPVIFFCQNNHYAISVPFTRQSAVPTVAERAAAYNIRGIRVDGNDVLAVYTAMEEAVTCARDGKGATLIEAVTYRKGSHTTADDAARYREPAEVGEWVRNRDPIPRLEKLLQAEGLLTEAEIREWEEHCAERVEQAVKEAESSPAPPADHLFAHVYETPPPELRRQQAELLREGKRDG
>NZ_CP048103.1|WP_084190235.1|647079_648255_+|amino-acid-dehydrogenase
MAMKVLGSNQRTREKENTTRSEEMDQQSRMEDVFKLMEEGGHQQVVFCRDPGSGLKAIIAIHDTTMGPALGGCRMIPYPSTEEALKDVLRLSRGMTYKCGLADVDYGGGKAVVIGDPAKDKSPELFRALGRFVGGLNGRFFTGTDMGTTPEDFVHAARESKSFAGLPKSHGGSGNTAIPTAFGVMQGFRATARHLWGTDSLKGRTVALQGVGKVGARVVDHLVEEGARCVIADVSPERTDRIQARHPGVAVMHVEEIHRADCDIFAPCAIGGVINDETVEELRCQAVVGSANNQLEADRHGDRLHEKGILYAPDYLVNAGGLIQVADELEGYNHERVMEKTRGIYDMLLRIYELSRREDLPTCRAADRLVLERLQRTTDLKRIFLGLDRRS
>NZ_CP048103.1|WP_009711357.1|646150_646945_+|enoyl-CoA-hydratase/isomerase-family-protein
MKFQGDTITWQLEEGVGVITLNRPEVYNAFNREMDRALTTALKEAASDADVRALVITGAGKAFCSGQDLNDRSDPNIGSLSLGESVRERYNPLIRTIAEMEKPVIASVNGVAAGAGCSLALACDMRIVSDRAKFVEAFVRIGLVPDSGSSWFLPRLIGFGRAMELLVTGRDVDAQEAVQIGLANRLVPHDRLAGESIAFARKLAQAPTRAIGWTKRALHQAMDSGLEEALEMEARLQELAGKTEDFREGVQAFAEKRPPRFQGK
>NZ_CP048103.1|WP_076526540.1|657064_658555_-|amidase
MNPSEYISYDATALAEKIKKREVSPRELVEAAFARLEEVDPRLQAVVRTRREKVLREIEQLNLSQQPFAGVPILLKDISQAVAGEKLTAGARLLSSHVARRDSHLVAKLREAGFLFLGHTNTPEFGLKNITEPELYGSSRNPWNPACSPGGSSGGSAAAVASGVVPLAGASDGGGSIRIPASFTGLFGLKPTRGRTPVGPGVGRQWQGASIDFVLTRSVRDSAALLDLLQTVQPEAAFQTPLFDGSFREDMQRGMKPLRIAFATASPVGTPVSEEAVVAVHKTVKWLEEQGHHVEEQETGVDGIRLMQDYYLMNSGEMASMVASLETSLGRPITSQDMEIVSWVLNEAGKKVTAAEFAASLASWDTAAEQMAEFHKTYDLYVTPATAHAAPRVGELTHTPQETKELMKVSQLTKQEQQSLIYDMFLPSLTYTPFTQLANLTGQPAMSVPVHLTPDGLPLGVQFIAPKGMENRLLRLACALEQSELWVGMKGNPFMG
>NZ_CP048103.1|WP_172998892.1|658866_660000_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MHKAYKFRLYPTPKQATLIHKSIGCSRFVFNQFLAKWNENYQLTGKGLTYHTCSSQITQLKKEIDWLNEVDSTSLQNSLKNLADAFSRFFKKQNDKPRFKSRRNRVQSYTSQCNYPKGRKPSIEVAGNRIKLPKLGWVKFAKSREVEGRILSATIRRNPSGKYFVSVQCEMDRCPYQPVDKEKAIGIDLGLTDFAIFSNGTPKVKPPRSFRTYEKKLAKAQKIMSRRTKGGSNWHRARVKVARIHEKIVNARHDFLHKLSSKLIYENQVISVEDLPVKNLVQNHKLAKSISDASWSEFGSMLEYKAKWHGRTLVKVGKDFPSSQLCSGCKYRNQEVKKLSVREWTCPECHEHHDRDINAATNILREGLRIIAAGHAV
>NZ_CP048103.1|WP_076525760.1|660337_661636_-|hypothetical-protein
MFKKRSSRLCLFLLPVLLTSFLISSGPQGAHAETKTGCFDSRVSITPEEKRITDGAPIPQRILKESRFDRYVDRFEHALCSAPDLRTAEKVVERHSTRLWQTAVDRAQGKRPDLGTLDRYDDRPLYWARLQMTRALRQWKPDFPMTGAQRQELLKQLEYASRGITSVQFPKGKGIKRILVSGFDPYRLEQEFRRSNPSGASALQLDGMRIRTEDGPAVIQAVTFPVRWEDFEDGIVEDAFGPHLTQGPHRIDLMMTISQGGPRRMAIEGYAGRWHTGIDNRLESRSEVTPTVSHWPMPDPLPEFIETTLPVQAMIDAGTGPWPVLRNDEVCEWLPPDFSDPYSCHDGGPTPGSKARSGGGGSYLSNESQYRSNRLRLGLGAQDLPGGHLHIAELEFYPEDPSIHTDPDFQHHRRVTVDQTVSLVKAAARAVH
>NZ_CP048103.1|WP_076525762.1|661889_663323_+|PTS-mannitol-transporter-subunit-IICB
MSANQQAIDQNREPAQEQNWKVKVQRMGSHLSGMIMPNIGAFIAWGLITALFIPTGWLPNEHLAKLVDPMIKYLLPLLIGFTGGNMVYGARGGVVGATATIGVIVGADIPMFLGAMLMGPLGGFAIKQVDRLFEGKVRSGFEMLVNNFSAGIVGGLLTLAAYLGIGPVVLWLNKALAAGVEVIVGAGLLPLANIFIEPAKVLFLNNAINHGVLSPVGIEQAANTGKSILFLLEANPGPGLGILLAFTIFGKGSARQSAPGAAIIQFLGGIHEIYFPYILMKPLLILAAIGGGVAGVFTFTLFDAGLVAVPSPGSIFAVLAMTPRGGYVGVLAGVLVAAVVSFLIAALFLKRSSGDEAGDLEEAAKSMEAMKGKKSAAASMLTSQKPVRKIVFACDAGMGSSAMGASVLKNKVNKAGLEIQVTNTSISQLPEDADLVITHKNLTDRAKEKLPHARHISVDNFLNSPEYDALISRLKED
>NZ_CP048103.1|WP_076525764.1|663351_665460_+|BglG-family-transcription-antiterminator
MYFSSRERNLIRLLMDSDQVWTVKKLAETLGVSERTIHRDLSGVEASLDGMGLSLRKKTGVGISLEGDSAGLEALRSVLAEQPETEFTPDERKTLLLCTLLVTSEPVKLIALAQDLHISSATVSQDLSRIEGWLASFGLTLVKKRGWGVQVTGNEKDRRAAIRSLLAEHFDEAEILGMLKQSLQRKTGNYSGLVMERLLGMVEREKLSAVEEAVKEEIGRLPYSLADGAYIGLVVHLALAVERIEQGETLTFDSKLLHELQMTREYRIAARIASRLESEFQQEFPESEVANLTLHLRGAKLGSDRQNWLESEVGAAAVEAGELIRRVEQELNVSLADDPSLMQGLAAHLERAVYRMKLNLPIHNPLLARIEQDYPAVFAAVEQAIKEVFPQYRVPREEIGYLVMHFGSALARKRRGRSPSVLVVCASGIGTSKLLVSQLQTEFPELRRIRNASLLELQQQGLSEYDLVISTIPLESDEVDVLRVHPYLTGEDLVKIRAYLDERMQRRIRGKPREQAVEGKDGQRTMDRLENIQLLIQTTLELVKGFSLSSLPAEPLRSLLDRACGKLEETGVLRDGKPVVDRLLERAEGGGLGIPGTGMALFHTRSGEVLRPSFTMYHLTDSIPVEGMDGTTMLMDDLLLLLAPGDTRKIVSDLLSRISVLIIESPHSLAVFQSKDEERIRDYLTEHLNRYIYDQIEEQRSV
>NZ_CP048103.1|WP_076525766.1|665462_665900_+|PTS-sugar-transporter-subunit-IIA
MSHSILTEETVLLNADAKNKEEAIRLAGQLLVDQGCVEPSYIERMLEREQSLTTYIGNSVAIPHGTEEGKKNILRSGISILQIPGGVDFGDGQTAKILIGIAGKGDEHMEILSKIALVCAEEESVDKMVHAQSKEELLSLFDEVN
>NZ_CP048103.1|WP_076525768.1|665902_667057_+|mannitol-1-phosphate-5-dehydrogenase
MLAVHFGAGNIGRGFVGALLSHSGYEVCFVDIQASLVEAIRERRAFTIHLLGDEGKRIDVNNVTALNSGTEPERVIETIAGADVVTTAVGPTVLKSVAPLLADGLRRRLEKGGGPLNVIACENMLGGSSLLKRLVTGEMTEEECREVDSLIGFPDAAVDRIVPEQRETDLLAVEVEPFYEWVVDLRGVKGNLPSIQGVTYVEGLAPYIERKLFTVNTGHAVCAYLGHHLGYGTVQEAIADPSVSETLRGVWEETGELLVRKHGFDPRDHRKYVGEIRHRFQNPHLTDPVTRVGRSPIRKLGREERLLGPALQLMDRGIQPDHLAVGIAAALRFENPADPEAVELQRILQGEGVAGALDTIAGLSPEHPLVRRVWERYQKLGQGV
>NZ_CP048103.1|WP_076525770.1|667637_668600_-|sporulation-protein
MIKNLMAKLGKGGAKVDLVLEKEDYLPGEEVKGELMIQGGTVDQQINRIQVDLRLSVRVKEKTLSQTIQSFPFQQSFTIQSAERRSFPFSYRLPEDLPVSGNHIFYTFDTRLDIAAGVDHLDHDTIRIHPPRPLQKVLDAFSQLGFREKYDSRSFTGQTQEFELFPTEFLQGQVEEVEFIAALDGSGVRLLLEVDVFTGFGKQEARRELFLASDCLDDENYLQEHLREVLTEMVSDPSSGFSPIQHQPMQSHAAKSGPNWGGMVGGFAAGLLGGMVLSELAEGGLDGLSETIEEATDFELPDGGELLDDIGDFFGGDDED
>NZ_CP048103.1|WP_076525772.1|669030_669840_+|MBL-fold-metallo-hydrolase
MSKLQIEQMQQGEVDALQFRFNFFGNGFRICVYHVDGLLLETGPRRVRKQMKEFAEVIQPRAIALTHFHEDHSGNAGFLSGQGRIPVWMGRQTAEILSDPPRIPFYRRLVWGSIDPVQGEDRDVIETDRFRLRAVPTPGHAEDHIAWVEEEQGWAFTGDLFLGTRLNYGLREESLTAMAASIRRLLAFPIRTVFCSHAGVVPEGAKSLEKKLDFLDWLREETLRLHRQGAQPGEIASRLLKKTPGLVWFSRGELSPVHLIRTILREEGV
>NZ_CP048103.1|WP_076525775.1|669866_671150_-|PTS-sugar-transporter-subunit-IIC
MNTFISFLDKNLSGPMARLSEQRHLRAIRDGVISALPFIIVGSFFLIVAFPPLPEDSSISRWAAENVNEILIPYRLTMFIMSLYIAFGVGYNLAKSYELDPLSGAQTAVAALLLTITPRMIEDLGFVLPMNNLGGHGLFVAMLVSILSVEILRFCKGSKLTIKMPEQVPASVSRSFEALIPVALVVLLMSLITVVFEIDLHQVVDKAVSPLVTAGDSIFGVWIPVFLITFFWSFGIHGVSVVGTVARPVWEVYLFNNADAVASGASHIPHIAPETFYQWFIWIGGSGATLGLVLAMLLFSKSKYSKTLSRACLVPGIFNINEPVIFGVPIVLNPIMIIPFVITPLITATLSYVATAAGWVTPTYIQPPWTLPAPIGAYLATGGDWRAILLVLLNIAISFCIYLPFFKIYDRKMAEMETEGGSDPQSA

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Crispr_ID: NZ_CP048103_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_5

1724507-1724584

Orphan

Consensus_repeat	Method
TGCATAGCGTGACCAGGGAGCGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_5

>merge|NZ_CP048103|5|1724507-1724584|CRISPRCasFinder
TGCATAGCGTGACCAGGGAGCGAAGCGACCCCGGCACGACTTGTGCTGGTGAGTGCATAGCGTGACCGGGGAGCGAAG

>NZ_CP048103|5|5|1724507-1724584|CRISPRCasFinder
TGCATAGCGTGACCAGGGAGCGAAG	CGACCCCGGCACGACTTGTGCTGGTGAG
TGCATAGCGTGACCGGGGAGCGAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076522847.1\|1724750_1725680_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|378820
NZ_CP048103.1\|WP_040387141.1\|1730929_1732093_-\|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223153
NZ_CP048103.1\|WP_052528602.1\|1715734_1716388_+\|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl\|CDD\|234657
NZ_CP048103.1\|WP_009708450.1\|1714974_1715766_+\|segregation/condensation-protein-A	unknown	unknown	gnl\|CDD\|234635
NZ_CP048103.1\|WP_009708491.1\|1735196_1735688_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|376376
NZ_CP048103.1\|WP_009708480.1\|1720546_1721257_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP048103.1\|WP_076522853.1\|1729371_1730952_-\|phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|237436
NZ_CP048103.1\|WP_076522855.1\|1733046_1735152_+\|ATP-dependent-helicase	unknown	unknown	gnl\|CDD\|223288
NZ_CP048103.1\|WP_076522843.1\|1721592_1723188_+\|cytochrome-c-biogenesis-protein-ResB	unknown	unknown	gnl\|CDD\|377471
NZ_CP048103.1\|WP_009708453.1\|1717156_1717609_+\|sporulation-protein-YtfJ	unknown	unknown	gnl\|CDD\|131921
NZ_CP048103.1\|WP_159439646.1\|1728547_1729249_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP048103.1\|WP_084189830.1\|1726740_1728456_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|380161
NZ_CP048103.1\|WP_172998955.1\|1719852_1720386_+\|spore-maturation-protein	unknown	unknown	gnl\|CDD\|223772
NZ_CP048103.1\|WP_052528609.1\|1735851_1736178_+\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP048103.1\|WP_159439645.1\|1716494_1717184_+\|DUF2953-domain-containing-protein	unknown	unknown	gnl\|CDD\|378578
NZ_CP048103.1\|WP_076522845.1\|1723190_1724393_+\|c-type-cytochrome-biogenesis-protein-CcsB	unknown	unknown	gnl\|CDD\|274447
NZ_CP048103.1\|WP_040387882.1\|1725940_1726657_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP048103.1\|WP_009708493.1\|1736511_1736721_-\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_CP048103.1\|WP_009708454.1\|1717722_1718856_+\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP048103.1\|WP_076522841.1\|1718859_1719447_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225336

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076522847.1\|1724750_1725680_+\|alpha/beta-hydrolase	gnl\|CDD\|378820	pfam12146, Hydrolase_4, Serine aminopeptidase, S33. This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.	2.59993e-69
NZ_CP048103.1\|WP_040387141.1\|1730929_1732093_-\|alanine--glyoxylate-aminotransferase-family-protein	gnl\|CDD\|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	2.58646e-154
NZ_CP048103.1\|WP_052528602.1\|1715734_1716388_+\|SMC-Scp-complex-subunit-ScpB	gnl\|CDD\|234657	PRK00135, scpB, segregation and condensation protein B; Reviewed.	4.47487e-69
NZ_CP048103.1\|WP_009708450.1\|1714974_1715766_+\|segregation/condensation-protein-A	gnl\|CDD\|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	2.81783e-73
NZ_CP048103.1\|WP_009708491.1\|1735196_1735688_-\|inorganic-diphosphatase	gnl\|CDD\|376376	pfam00719, Pyrophosphatase, Inorganic pyrophosphatase.	8.45542e-86
NZ_CP048103.1\|WP_009708480.1\|1720546_1721257_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	6.78719e-98
NZ_CP048103.1\|WP_076522853.1\|1729371_1730952_-\|phosphoglycerate-dehydrogenase	gnl\|CDD\|237436	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional.	0
NZ_CP048103.1\|WP_076522855.1\|1733046_1735152_+\|ATP-dependent-helicase	gnl\|CDD\|223288	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair].	2.36617e-139
NZ_CP048103.1\|WP_076522843.1\|1721592_1723188_+\|cytochrome-c-biogenesis-protein-ResB	gnl\|CDD\|377471	pfam05140, ResB, ResB-like family. This family includes both ResB and cytochrome c biogenesis proteins. Mutations in ResB indicate that they are essential for growth. ResB is predicted to be a transmembrane protein.	2.6915e-94
NZ_CP048103.1\|WP_009708453.1\|1717156_1717609_+\|sporulation-protein-YtfJ	gnl\|CDD\|131921	TIGR02874, conserved_hypothetical_protein, sporulation protein YtfJ. Members of this protein family, exemplified by YtfJ of Bacillus subtilis, are encoded by bacterial genomes if and only if the species is capable of endospore formation. YtfJ was confirmed in spores of Bacillus subtilis; it appears to be expressed in the forespore under control of SigF (see ). [Cellular processes, Sporulation and germination].	6.81546e-52
NZ_CP048103.1\|WP_159439646.1\|1728547_1729249_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	5.52355e-69
NZ_CP048103.1\|WP_084189830.1\|1726740_1728456_+\|HAMP-domain-containing-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	3.46189e-122
NZ_CP048103.1\|WP_172998955.1\|1719852_1720386_+\|spore-maturation-protein	gnl\|CDD\|223772	COG0700, SpmB, Uncharacterized membrane protein [Function unknown].	1.74043e-56
NZ_CP048103.1\|WP_052528609.1\|1735851_1736178_+\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.13536e-20
NZ_CP048103.1\|WP_159439645.1\|1716494_1717184_+\|DUF2953-domain-containing-protein	gnl\|CDD\|378578	pfam11167, DUF2953, Protein of unknown function (DUF2953). This family of proteins has no known function.	1.20516e-13
NZ_CP048103.1\|WP_076522845.1\|1723190_1724393_+\|c-type-cytochrome-biogenesis-protein-CcsB	gnl\|CDD\|274447	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB. Members of this protein family represent one of two essential proteins of system II for c-type cytochrome biogenesis. Additional proteins tend to be part of the system but can be replaced by chemical reductants such as dithiothreitol. This protein is designated CcsB in Bordetella pertussis and some other bacteria, resC in Bacillus (where there is additional N-terminal sequence), and CcsA in chloroplast. We use the CcsB designation here. Member sequences show regions of strong sequence conservation and variable-length, poorly conserved regions in between; sparsely filled columns were removed from the seed alignment prior to model construction. [Energy metabolism, Electron transport, Protein fate, Protein modification and repair].	1.3696e-47
NZ_CP048103.1\|WP_040387882.1\|1725940_1726657_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.55636e-94
NZ_CP048103.1\|WP_009708493.1\|1736511_1736721_-\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	2.84697e-20
NZ_CP048103.1\|WP_009708454.1\|1717722_1718856_+\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	4.4781e-103
NZ_CP048103.1\|WP_076522841.1\|1718859_1719447_+\|hypothetical-protein	gnl\|CDD\|225336	COG2715, SpmA, Uncharacterized membrane protein, required for spore maturation in B.subtilis. [General function prediction only].	4.37669e-86

>NZ_CP048103.1|WP_076522845.1|1723190_1724393_+|c-type-cytochrome-biogenesis-protein-CcsB
MVQVMEYALLGAFLFYLFATIAFVTAVTGKGSRVGKEAHTRLWGNWGISLTIIGVALHLVFIVTRVLLGGHFTSNMFEFTAFLCFTIVAAFIVLFFIYRSVTLGAFAMPVAMLMVAYAAVFPKDVEPLIPALQSYWLHVHVTTVAVGQGALAVGFVAGLIYLIRWVGMDRNSKTAVWLEVIMVTILMVAGFVITFFVFSVTDYQATIQHTAEGQSLVQEYDLPPIAGPHNGKVVQMDSFLGMNNPLFEVPSWMKGAEAAKKFNSVLWSVLSGLVLYALLRLLLRKRVYELLYPLVKSLDLEKVDEISYRAIAIGFPIFTLGGLVFAMIWAHEAWGRFWGWDPKETWALITWLYYSGYLHLRLSRGWHGLKSSWLAVGGFAVIMFNLIAINLVFAGLHSYA
>NZ_CP048103.1|WP_076522843.1|1721592_1723188_+|cytochrome-c-biogenesis-protein-ResB
MINNTKCDCGHNNPVGTVLCEHCGKPLDEKGDSDRPLEMRYEGKARRSQTQKATLFDRIWNFFSSVKVAIWLILITLVVSILGTLLPQEQYIPSNRPEIYYSETYGFWGEVFYRLGLSNLYESPVYIALLASIGISLVVCSLDRVIPLYKALTHQKVVKNIRFINRQRVSRTETVPESDKETLLDRLAESLSQKHYRIRREGDSILAEKGRFSRWGPYINHIGLILFLVGILLRHTVPGWYLDKYVYVREGETKKLPELNYYVKNVKATAELYDPKEMPESDKSQPTVKKYETRLILYEKDHETGKLRELKRGTAIVNHSFKYDDLELFQSDFTTETQAIQLNVKDKQKNRNLDTFKVDLFDPAPKYQLKNGIHIDILDYFPDFVMEGNRPATKSETPNRPAFIFSVDAPDLKKPEVSWMISGTNLDDINRKNRYTMELKGLETANVSGLMIRVDKGLPIIFLGGIISMIGLVMGFFWNHRRVWIRWQDGHLHVGAHTNKNWFGLRRELEQATEKTDLPLSFSTDRRQEVD
>NZ_CP048103.1|WP_009708480.1|1720546_1721257_+|rRNA-pseudouridine-synthase
MERLQKVMARAGVASRRKSEEWILSGKVRVNGKTVTQLGTRVDPERDRIEVEGRLIRPEQKRYFLFYKPKGVITSLSDPDGRPVVTDWFREVEERVYPVGRLDYDTEGLLLLTNDGELTHGLAHPRHEVDKVYQATVKGIPAKKSLRRLETGVKLTDGWTAPAKVRMLRSGKEQACLELTIHEGRNRQVRRMCEAVGHPVVHLVRVQLAFLTLSGLQPGEYRELSKEEIRRLKELL
>NZ_CP048103.1|WP_172998955.1|1719852_1720386_+|spore-maturation-protein
MEAVSFLSNIMIPAILAFIPLYATYRRIPVYESFVEGAKEGFPTAIQLIPHLVGMMVAVSIFRETGALQFYLGLFKPLVAWIGFPEEALPLGLLRPISGSGSLAFAESIFRTHGPDSYLGRLASTMQGSTDTTLYVLTVYFGAVGIRRSLYAVKVGLFADLCGLVASWLIVTWVFGV
>NZ_CP048103.1|WP_076522841.1|1718859_1719447_+|hypothetical-protein
MVNYIWLFMIVSGVVAGVIQGNVDTVTEAALKGAKDGVAVCLGLISILVFWLGMMRIAQEAGLLEKLARILGPAARLLFPGVPRDHPAMGYILSNMSANLFGLGNAATPMGLKAMEELQKLNPDPKTASPAMCTLLALNTSSLTLIPTTIIGIRMEHGSAHPTEIIGTTIFATCCSTLAAILLDRWYRARWTAKG
>NZ_CP048103.1|WP_009708454.1|1717722_1718856_+|D-alanyl-D-alanine-carboxypeptidase
MRLTRWLLAVWIGGVLVLLPAESLASHRPDHLELSARAAAVIDVQSGRILYEKKAGQQMRIASLTKIMTAIVAIENSDLTEKVKVKPGAVGVEGSSIYLKPGEEIPLEHLLYGLMLRSGNDAAVAIAEHVGGSVEGFVYKMNEKAEYLGLRNTHFQNPHGLDAKEHYSSAEDLARLTAYALKNPEFRKIVSTQVKTVPWPGEEWHRKWYNKNKMLRLYPGGDGVKTGFTKLSRRTLVSSATREGRQIATVTLNAPNDWEDSMRLLEYGFRHFQRVRLVKKGEEFSSGLKGRAPLEIVASRSFTYPLTEEERDRVEVRPMITYPLKKAKVSGIRVGTARIFVEGKPVGSIPLITRGESEETVWGDWFTVLASIYEQEG
>NZ_CP048103.1|WP_009708453.1|1717156_1717609_+|sporulation-protein-YtfJ
MAEHPIQGLMTTAMENIKEMVDVNTIVGEPVETPDGSIIIPVSRVGFGFAAGGSEFKGLEPPDPPQGKEGPGKKGGDTPDFPFGGGSGGGVSITPVGFLVVSKTGIRMLNMEGSTHLFDRLLDLAPGVMEKLQKWTKDEMKSSQEPKTDI
>NZ_CP048103.1|WP_159439645.1|1716494_1717184_+|DUF2953-domain-containing-protein
MALVWMILSAVILIILILFPFTSVRIHLIYRRKAEKDHLEFRFRLFFGWIRFRIQVPSLQLQGSGVTVRSKEKGNMPGSEPRRQKLRITWRKLRNLRHRFARLQQRILQLNETLMEAGRRFMSRVVCERLEWETLIGTGDAASTGIVTGMIWGVKYTLIGFAGSHIRWEKAPRIEVQPLFNTERIETCLESIFRFRIGHAILAVIRLLVRLLQNQKGGEGSWQNTRFKA
>NZ_CP048103.1|WP_052528602.1|1715734_1716388_+|SMC-Scp-complex-subunit-ScpB
MEEQRLKPIIEGLLFAAGEDGLRVAEIAEVTETDKRTLRRVLKEMAQEWKEQGRGIQIVEVAQVYQLTTLPEHREYFERLAKSPSRSQISRAALETLAVIAYRQPIIRAEVEEIRGVKSEKVIHYLKRKGLIREVGRAEGAGRPILYGTTREFLEYFGLRSLDQLPPADSIFEWAEWERERQELYERLGVDPPSGEDPPAPDTEAEAEVVEASNPER
>NZ_CP048103.1|WP_009708450.1|1714974_1715766_+|segregation/condensation-protein-A
MEMKIKLDMFEGPLDLLLHLIDKSELDVCEIPIARITDQFMESLAAMQVFELESASEFLVMAATLLAIKSRMLLPRAEPADLSDVLEDEDGMDPREELVQRLLEYKRYKRLSDVLREREAARNQVYTRMPMDLTEYTPDENPLEGITPDELLQLFVDVINNREEEGEEEPTKMTREEISVSDRMDEIHDFLTRQGGTLFFSELLHWEVITRERVITTFLALLELLKLKRIRIRQGGLFDDIRVEALISEGGEAAGGTTVEANY
>NZ_CP048103.1|WP_076522847.1|1724750_1725680_+|alpha/beta-hydrolase
MNHTTFTFTSDGKDQLQIVANRWEPDAPARAAVQIAHGMAEHIDRYDAFAKSLVQQGFVVYGNDHRGHGRTAGEEDRGWFAEENGFEQVVQDLHRLTQIIHREQPGLPLFLFGHSMGSFLARRIIQLHGDEYQGVILCGTGGDPGWVGKLGLGLASREVRKKGSRTPSPMMAKLVTGGFNRKLRPRRTEADWLSRDEEEVDQYLADPLCGGVLTAGFYRDLLAGLILIHRKENMELTPKSLPILLIAGEDDPVGDFGKGVRRVAEGYRRAGIKDLTCKLYPGARHELLKELNREEVVQDLIDWLEERVK
>NZ_CP048103.1|WP_040387882.1|1725940_1726657_+|response-regulator-transcription-factor
MEKQERILVVDDEDRIRRLLRMYLEREGYLIDEAEDGETALKKGLEIDYDLILLDLMLPGMDGVDVCRELRNKKATPVIMLTARGEETNRVEGFEAGTDDYVVKPFSPRELVHRVKAVLRRSSATAFLSTETETHNVIVFPELTIDHDAHEVRAGGTEVSLTPKEYELLHYLASSPDKVFTREELLRDVWNYEFFGDLRTVDTHIKRLREKLNRASPKAAAMIHTVWGVGYKLEVPKD
>NZ_CP048103.1|WP_084189830.1|1726740_1728456_+|HAMP-domain-containing-protein
MEQILSTYYEAELDNMNALAREVHDTLQGPETHGRAEYLRSVLKVAELNETYTIILGPDGSVQPLASPKVPDIPWRDILEQTEIDKVFRGEPASLRTRVIVGDKGSSPFPLFKDEVMLVALPLKKGEKVTGAVVMYRTQGQLSENEIKKVILYAALIGIFLTTIFAFFLSSRITQPLIQMKRGAERMARGEFSARVPVRSHERDEIGDLAVAFNRMAGQLEESIQALSREKEQLASILRSMADGVITLDAKGHVIVTNPPAEKFLSDWREEGGGSLWPSPLEQFFHQVLEGEREVFGDIDVHGRTWALVMAPLYAGPDEIRGAVAVLRDVTEERRMDKLRKDFVANVSHELRTPLSMLQGYSEALLDDIAASPEDQREITRVIHDESLRMGRLVRELLDLARMEAGHIRLEPSTVHVPELIRRVYRKFQAIAREEKVALQVDLPDGMDPVQWDEDKVEQVLTNLTDNAIRHTPEGGRVTLRALFAEKGVQLIVEDTGSGIPQEDLPFVFERFYKADKARTRGQGGTGLGLAIVKHIAEAHAGSVSVKSKEGEGTRFTVQLPVKTPIEKEQS
>NZ_CP048103.1|WP_159439646.1|1728547_1729249_-|SDR-family-oxidoreductase
MADLQGKTAIITGGSKGLGAVLARRFARGGAQVVAAARSTDALEKLAGEFPDHIIPFTCNITQADQVKSLIDSTVNRFGKLDILVNNAGVGRFDRIPELSEEDWDLMMAVNLKGPFLASKFAIPHLIPTKGHIVNVSSVAGTVAFPGGGGYCASKFGLMALSDVLTQELKKHEVKVNTICPGSIQTEFSGNPKSYSLTAEQVTEAIWHMVTAPEGVIYNQVIMRPQVPSQMQK
>NZ_CP048103.1|WP_076522853.1|1729371_1730952_-|phosphoglycerate-dehydrogenase
MYRVLISDPLSDQGIEKLLEAPDVEVIRKTDLSVNQLMEEISTVDALIVRSQTQVTAQVIQAGRKLKAIGRAGVGVDNIDISAATARGILVVNAPDGNTVSTAEHTFAMLISLARNIPQGYRDLIQGEWNRKRFVGVELNHKTLGIVGLGRIGTELAKRARAFNMNVIAFDPYLTEERAKKAGIQQATLEEVITGADFLTVHTPLTKETRHLIDADAFAKMKDGVRVINCARGGIIDENALAQAIQSGKVAGAALDVFETEPPGKHPLFALPQVIATPHLGASTREAQENVAVDVSGEILHILRGEPFKNAVNLPSIPAELQERLRPYQKLAEKLGSFATQIADGALDEIIVTYSGDLAEVDTSPLTRIILKGALSHYLAEINDVNAPHLAKERGVRVTEQKMSQSHGFNQLIHLKVRTNRSDSSISGTLLNGLGPRIVKIDSYSVDVQPFGHLLLIRHRDQPGAIGRVGTVLGSHDVNIATMQVGRRDQGGSAIMMLTVDKQLPEELLPTLEELEEIQQVIAIDL
>NZ_CP048103.1|WP_040387141.1|1730929_1732093_-|alanine--glyoxylate-aminotransferase-family-protein
MLKDKFRLQIPGPTPIPPRVQQAMSRPMVGHRDPDCSRLVRDLSLRLAPVFGTRNPVLLLAGSGTSALEAAAVNTLSREDEAAVVVTGAFGDRFANILSSMEVTLRRLDIPWGTSCSPEELTAFLKNYPRVKTVFLTYCETSTGVLNPVRELAAVVREQTDALTVVDGVSCIGGVPAGVEDWGIDILVSGSQKALMLPAGLAFAAISDKAWKQIEANPHPRFYLDFRKYRNSLQNATTPFTPTVSLLFGLEEVLNMIEEEGLEATFARHRLMRDMIRAGMRALGLALLTDDRDASPTVTAVRGGDSWSAEALGKELRRLGLRVAGGQQHLKGEIFRIGHMGYADPLDMLTAITAIEVALARLGAPVEPGAGTKAAEEELIHVSSADL
>NZ_CP048103.1|WP_076522855.1|1733046_1735152_+|ATP-dependent-helicase
MQSVEAVDLSGLNPGQREAVTLEGKSAVVFAGPGSGKTTVLTRRAAWLLSRGVPGNRMMVVTFTRAAAQEMKQRLLKQTGGSAGITIGTFHSIFLRLLRNSGVPIPRLAGEREQTGLIRELLIGSGRPADEEAVSNTLSQIGFCKGNLMLPERMKLKQEKNIAFRELFQTYQRVMEQRGIWDYDDILLRFHDLLRGDHPLQRRFVHILVDEFQDINRVQMETIRLLLPEGGTLFAVGDDDQSIYGFRGSDPGYMLDLPRTLPNCTRIVLTTNHRSTEPIIRVGQQLIAHNRLRQPKRVEGTGKAGEEPRWWEPADEEDEAGQILDMLRDGVETAVLYRTSTQARAIIDALVRADLPFAVSPGDAAFYRRWQVTDVLSYLKLANHPDDLDALVRVVNRPKRYLFGEEWLDELQRSSRERNLPLLLCLPKLKGLESYQTKYLERMVQQVTALRGCSPAAAVKRVRREIGYDTFLSAMAKDLGHDFQTLAEPVDELAMAAAAHGEIEDFLDHIEQVDRKVREQPESPRVRLMTLHKSKGLEFDRVVLIGLHGMVLPHRRSLQVPDKMKSRAWEEERRLLYVGLTRARRELILSVSRTRQGKRVGPSPFLREMGYTGEEEGPVAQPASRSRPDPEQPQLRYAGESLTEGETLLHSRWGDGVVIRVESLEGSAPGRKVTVRFGDEIHTLHYELSRQLGLLERGGGQ
>NZ_CP048103.1|WP_009708491.1|1735196_1735688_-|inorganic-diphosphatase
MTQKRFTVDAFIEIPAGSQNKYEYDKEKGVFRLDRVLYSPMHYPTEYGYLENTLAEDGDPLDILVLTTFPTFPGCVIQTRVIGVLLMSDDKGKDEKLLGVPVDDPRWDQVHSLEDVPAHTLREIEHFFKVYKDLENKETRIEGWQGADVAERLYRESLERYSG
>NZ_CP048103.1|WP_052528609.1|1735851_1736178_+|rhodanese-like-domain-containing-protein
MKEVKDQQIPADSFAKMYIKGELEDSILLDVREKHEWEVHHLEGSIRIPLRCLPLEWKRLDPGKKIYVLCAHGIRSLHATLFLYERGCRQVVNVEGGLARVSLYLERT
>NZ_CP048103.1|WP_009708493.1|1736511_1736721_-|ferredoxin
MRTWVDKDTCIACGACGAAAPDVYDYDDEGIAYVILDDNAGTAEVPEEFHEDVYDALEGCPTDSIKVEE

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Crispr_ID: NZ_CP048103_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_6

1998326-1998485

TypeIII

Consensus_repeat	Method
GTTTCAATTCCTCATAGGTACGTTGAAAAC	CRISPRCasFinder

2 spacers

cas6,cmr6gr7,cmr5gr11,cmr4gr7

The CRISPR arrays of NZ_CP048103_6

>merge|NZ_CP048103|6|1998326-1998485|CRISPRCasFinder
TTTTCCATTCCTCATAGGTACATTGAAAACGGTCGCTCAGAAAATCAAGGCCGTTTATGACATTGGTTTCAATTCCTCATAGGTACGTTGAAAACGCGAATTCCCCCATCACCCGCATCTCACCAAGTATGTTTCAATTCCTCATAGGTACGTTGAAAAC

>NZ_CP048103|6|6|1998326-1998485|CRISPRCasFinder
TTTTCCATTCCTCATAGGTACATTGAAAAC	GGTCGCTCAGAAAATCAAGGCCGTTTATGACATTG
GTTTCAATTCCTCATAGGTACGTTGAAAAC	GCGAATTCCCCCATCACCCGCATCTCACCAAGTAT
GTTTCAATTCCTCATAGGTACGTTGAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076523076.1\|2002681_2003674_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP048103.1\|WP_076523071.1\|1999671_2001105_-\|sucrose-6-phosphate-hydrolase	unknown	unknown	gnl\|CDD\|273554
NZ_CP048103.1\|WP_040387926.1\|1991061_1992387_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP048103.1\|WP_076523078.1\|2003797_2004025_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP048103.1\|WP_143456997.1\|1992925_1994026_-\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP048103.1\|WP_009708808.1\|2006660_2007776_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	COG1604_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP048103.1\|WP_159439653.1\|1992505_1992676_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_009708795.1\|1995073_1996234_-\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_CP048103.1\|WP_143456998.1\|1996848_1997088_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523069.1\|1997233_1997707_+\|cupredoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|259877
NZ_CP048103.1\|WP_040387201.1\|2005559_2006375_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387203.1\|2008219_2009044_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP048103.1\|WP_040387199.1\|1997808_1998234_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523062.1\|1988627_1990703_-\|type-I-DNA-topoisomerase	unknown	unknown	gnl\|CDD\|235516
NZ_CP048103.1\|WP_040387200.1\|1998686_1999622_-\|aminoimidazole-riboside-kinase	unknown	unknown	gnl\|CDD\|238572
NZ_CP048103.1\|WP_009708806.1\|2004170_2004944_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	COG1583_cas6_CAS-I:CAS-III:CAS-IV	gnl\|CDD\|273848
NZ_CP048103.1\|WP_076523074.1\|2001196_2002600_-\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_CP048103.1\|WP_009708796.1\|1996543_1996681_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387202.1\|2007768_2008206_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	cmr5gr11	cd09749_cmr5gr11_CAS-III-B	gnl\|CDD\|378242
NZ_CP048103.1\|WP_009708794.1\|1994097_1995030_-\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076523076.1\|2002681_2003674_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	9.4648e-122
NZ_CP048103.1\|WP_076523071.1\|1999671_2001105_-\|sucrose-6-phosphate-hydrolase	gnl\|CDD\|273554	TIGR01322, Sucrose-6-phosphate_hydrolase, sucrose-6-phosphate hydrolase. [Energy metabolism, Biosynthesis and degradation of polysaccharides].	0
NZ_CP048103.1\|WP_040387926.1\|1991061_1992387_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.68001e-74
NZ_CP048103.1\|WP_143456997.1\|1992925_1994026_-\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	1.04321e-122
NZ_CP048103.1\|WP_009708808.1\|2006660_2007776_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	4.32917e-55
NZ_CP048103.1\|WP_076523078.1\|2003797_2004025_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	8.34085e-10
NZ_CP048103.1\|WP_076523069.1\|1997233_1997707_+\|cupredoxin-domain-containing-protein	gnl\|CDD\|259877	cd04215, Nitrosocyanin, Nitrosocyanin (NC) is a mononuclear red copper protein. Nitrosocyanin (NC) is isolated from the ammonia oxidizing bacterium Nitrosomonas europaea. Nitrosocyanin exhibits remote sequence homology to classic blue copper proteins; its spectroscopic and electrochemical properties are different. The structure of NC is a trimer of single domain cupredoxins. Nitroscocyanin may mediate electron transfer. It could have a novel role as a nitric oxide dehydrogenase or a nitric oxide reductase in the oxidation of ammonia.	7.32146e-08
NZ_CP048103.1\|WP_040387203.1\|2008219_2009044_-\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	2.81785e-60
NZ_CP048103.1\|WP_076523062.1\|1988627_1990703_-\|type-I-DNA-topoisomerase	gnl\|CDD\|235516	PRK05582, PRK05582, type I DNA topoisomerase.	0
NZ_CP048103.1\|WP_040387200.1\|1998686_1999622_-\|aminoimidazole-riboside-kinase	gnl\|CDD\|238572	cd01167, bac_FRK, Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.	1.32294e-113
NZ_CP048103.1\|WP_009708806.1\|2004170_2004944_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	3.19994e-36
NZ_CP048103.1\|WP_009708794.1\|1994097_1995030_-\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_CP048103.1\|WP_040387202.1\|2007768_2008206_-\|type-III-B-CRISPR-module-associated-protein-Cmr5	gnl\|CDD\|378242	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5). CRISPR is a term for Clustered, Regularly Interspaced Short Palindromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species.	3.66756e-29
NZ_CP048103.1\|WP_009708795.1\|1995073_1996234_-\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_CP048103.1\|WP_076523074.1\|2001196_2002600_-\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0

>NZ_CP048103.1|WP_040387199.1|1997808_1998234_+|hypothetical-protein
MNIRFSTPHQYVFIHENVKHLLLVWSKEAKKQLFIAEETGDTLTLTHPGETYEETVWNHLEPFFFRQLETDEGTFPVVLGATFHVHGHRIGMYYRRPPGDNSPFFFRLADGQLHDIPDEEYEEVVKTFLQEFPEYIGEEAQ
>NZ_CP048103.1|WP_076523069.1|1997233_1997707_+|cupredoxin-domain-containing-protein
MTTSRQWLYLSIAFALVLIAILALLPMPWFDGKTTLQEVEEVSSTSTPEERTFHLVTTEYKAQLDGNEIEVYRWNPGSLVVREGDRVHLVLHGIHGKSHRFSLKEFGIEGTVNKGKQTKVSFTADRPGTYELICHDHLTPQSHGPMVAYITVLEKGR
>NZ_CP048103.1|WP_143456998.1|1996848_1997088_-|hypothetical-protein
MVETVLQLAARRKETVELIYLDRKGCLTQRRVRILELGEAEVRVFCWERKAFRRLRREGILAAERKERRRQPGKNVSFS
>NZ_CP048103.1|WP_009708796.1|1996543_1996681_-|hypothetical-protein
MGSQTNSQDQHEENDFLDMVKGTALFTGLFLGIALVGGILAEVLK
>NZ_CP048103.1|WP_009708795.1|1995073_1996234_-|ADP-forming-succinate--CoA-ligase-subunit-beta
MNVHEYQGKEILKQYGVVVPRGHVAFTPDEAVDAAKQLGGDLWVVKAQIHAGGRGKAGGVKLAKSLDEVKQYAEELLGKTLVTHQTGPEGKEVKRLLIEEGCKIEKEYYVGVVIDRSTDRVTMMASSEGGTEIEEVAANTPEKIVKVVVDPAVGLQPFQARKLAFAIGIPKNLVNKAVKFMMGLYQAFVEKDGSLAEINPLITTTDGQVMALDAKLNFDSNALYRHPEVVELRDFSEEDPKEIEASKFDLTYIALDGNIGCMVNGAGLAMATMDIIKHYGGEPANFLDVGGGATTEKVTAAFKIILEDPQVQGILVNIFGGIMKCDVIAEGVVEAAKQIGLDRPLVVRLEGTNVDLGKKILNESGLKITAADSMADAAEKIVSLVK
>NZ_CP048103.1|WP_009708794.1|1994097_1995030_-|succinate--CoA-ligase-subunit-alpha
MSIFINKDTKVITQGITGKTGLFHTKGGLEYGTQMVAGAVPGKGGTQVEITLDNGEIKSVPVFDTVAEAKEKTGANASVIYVPPAFAADAIMEAVDADLDLVICITEGIPVMDMVKVNRYMEGKRTRLIGPNCPGVITPGESKIGIMPGYIHTPGRVGVVSRSGTLTYEAVHQLTQRGIGQSTAVGIGGDPVNGTNFIDVLEQFQQDPDTSAVIMIGEIGGTAEEEAADWIKANMTKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTAKEKVAKLEACGVAVAPTPADIGETLVRVLKEKGLLEECTTVK
>NZ_CP048103.1|WP_143456997.1|1992925_1994026_-|DNA-protecting-protein-DprA
MRAWDEREGLVAMHQIRGVGWGTLDKLRQAGWDPGRPPEEKEMKTWRKAGVSSATIGRIREKWTPRWVERVSRELEKREIRAVTLLDGEYPPLLGQLPQPPWVLYVRGDVSHLQGPGLAVVGTRKPTSYGKRVTRQLAGNIADRGWTVVSGLAAGVDGEAHRAALEAGGRTVAVLGCGVDVVYPRHHRDLYKEVVRKGAVISEVPPGTEPRPGLFPRRNRIISGLSWGTLVVEAAEKSGSLITAHHSLEQGREVFAVPGPVTSAWSRGTNRLIQEGAKCVIDADDLWMELNHVPQPEAPLREGPLPGTELQPQEQALLDLLGEEPLTVDSLADRSDLPLGELHRQLLQLQVKGWVRQLPGAQFVKK
>NZ_CP048103.1|WP_159439653.1|1992505_1992676_-|hypothetical-protein
MRIQTPIVAGIIKRISPKLCVATALHGIRLSLAGKTSQFIHRRKGFLSISFAVHSV
>NZ_CP048103.1|WP_040387926.1|1991061_1992387_-|MFS-transporter
MRWKDWDLNLKIRLLGEGMINVLFWMFFPFMAIYFAESFGKGTAGTLLILSQVIGVLANVIGGYCADRFGRKRMMLIASAVDGIAFVVFALANSPWYHSPVLTFFCFSALGVSGSLYWPASHAMVADLVEPKHRNEVFAVFYTTVNIAVVVGPILGGIFFFKYRFGLLVAAAVLSLLLTVAISWLIRETVPRSEEASGFPEGKKLPWYRFLLVQLQDYRVILSDRNFMLFILAGILVAQTFMQLDLTVAVYVKEAIPQQTLFSLGDGSIRTGGAEFFGWLLAVNGFLVALFTVIVTRWVNRFPEGRVFIISALLYGVSMWVFGSSTALWVAVAGMVVLTAGELAVVGIQEGFVSKLAPENMRGQYFAAASLRFSIGRAIAPLAIPVTAWVGYGWTFILLGICAFISAWVYQLLFRRLNRVPGESGLPRAQGRDSLKEGVSS
>NZ_CP048103.1|WP_076523062.1|1988627_1990703_-|type-I-DNA-topoisomerase
MADSLVIVESPAKAKTIGKYLGRKYIVKASMGHVRDLPKSQLGVDTENGFQPKYITIRGKGDVLKELRDAKKKVKRVYLAADPDREGEAIAYHLAHSLNMEVDEECRVVFNEITKQAVKDAFKHPRKIDLDLVQAQQARRILDRLVGYGISPVLWKKVKKGLSAGRVQSVAVKLIIDREKEIRNFQPEEYWTVTAVLDAEGETFEAKFHGYGKKKKELKNEAEVKELLEAIKGKRFVVDEVNRSERRRNPAPPFITSSLQQEAARKLNFRAAKTMAVAQQLYEGVNLGKKEGSVGLITYMRTDSTRISETARQEARDYIQGQYGESYVPARPRTHKKQTGAQDAHEGIRPTSVLRTPAEMKPHLSRDQYRLYKLIWERFVASQMSPAVLDQISADIRVGEALFRATGSKVKFPGFMKVYTEGNDDGTKEENKFLPALEKGQLLKRKSIRPKQHFTQPPPRYTEARLVKTLEEKGIGRPSTYAPTLSTIQKRGYVMLEERRFVPSELGEVVISLMEEFFPEILDVEFTVNMEESLDYIEEGKVDWVQILERFYEKFQKRLEVAEEEMKEVEIRDEVSDEVCEKCGSPMVYKFGRYGKFLACSGFPDCRNAKPILKSTGVTCPGCKQGEIVERKSKKQRTFYGCNRYPECEFVSWDKPVPRPCPRCKSLMVEKKRKKGTMIQCTHCDYQEEKN
>NZ_CP048103.1|WP_040387200.1|1998686_1999622_-|aminoimidazole-riboside-kinase
MNGVICLGEALIDFIPLDGDHLTYKKAPGGAPANVAVGIAKLGGKSTFIGKVGDDVLGHFLIETLTGFGVDVSSMVLTDEVRTGVTFVTLEPSGERDFSFYIDPSADRFLQKEELDPAVFAGQKIFHFGSISLISEPAKSATLHAAALAKNKGMLTSYDPNLRLSLWDSAEQAKETILAALPYVDLLKMSEEELLFLTGCDTLEEGMNQLPDLPLIVVTLGEEGSLYRFQGETGRVPAMDCKVVDTTGAGDAFVSGILYSLNESQKGLAELSAPDIAEMLRFANVSGGLATTKKGALTGLPTLAEIQAILK
>NZ_CP048103.1|WP_076523071.1|1999671_2001105_-|sucrose-6-phosphate-hydrolase
MTDRESLLMKQAFEKALKNKAIVEKDPYRLSYHLMPPVGFLNDPNGLIKYQGVYHVFYQWNPFAATHGAKFWGHYTSVDLVHWREEPIALAPSEWYEKDGCYSGSAIEAGGKLHLFYTGNVKHEDGTRGTYQCLALSTDGIYFEKKGPIVRLPDGYTTHFRDPKVWRKNDRWYMIVGAQTLAGEGRAVLFTSVDLTHWEELGAVAGSGMNGLGDFGYMWECPDLITLNDRDLLLVSPQGLEPDGHFYRNLYQSGYFVGQLDYETARFRHGAFTELDRGFDFYAPQTFTDESGRRILFAWMGMTDDSEQYQPTIANNWLHALTIPRELQLQNDKIYQKPVAELRKLRKKEVRMDHVALEGDQLSLKDMHSAELILDFAEPVVGGFEVYFRREAFLTYDPGSKEVRLQRRNVRTNRMEERVCSIDSLTKLHIFLDHSSLEIFVNDGQEMFTARYFPDPAESGVILAGRAELGVKMWDLG
>NZ_CP048103.1|WP_076523074.1|2001196_2002600_-|PTS-sucrose-transporter-subunit-IIBC
MPENRKIAEEVIEAVGGRENIQSIAHCATRLRIMVNDKEKIKQEKIEHIDKVKGAFFNSGQYQIIFGTGTVNKIYEEISRLGMNTMSASEQKKEAVKSGSRFQRVVRTFGDVFVPIIPVLVATGLFMGLRGLVMQEQILALFGMKPEDIPQNFILFTQVLTDTAFIFLPALVAWSTFRVFGGTPIIGLVLGLMLVSPALPNAWDVAGGDVKPLHFLGFIPVVGYQGSVLPAFIAGILGAKLERAIRKRVPEALDLIMTPFLTLLVMITFSLLVIGPIFHIVEQGILKVATNVLAWPFGISGFLIGGLNQLIVITGVHHIFNMLEIQLLAQYHNNPYNAIVTCAVAAQGGAALAVGLKTRSAKLKALALPSSFSSFLGITEPAIFGVNLRYGKPFIMALIGGGAGGFLASVFGLKATGMAVTVIPGTLLYLNGQIPLYILVNLVAIVVAFVLTWLFGYSDRVKKEIEQ
>NZ_CP048103.1|WP_076523076.1|2002681_2003674_-|LacI-family-DNA-binding-transcriptional-regulator
MITIKEIAERANVSRTTVSRVLNKSGYVSEEARKRVQKVIEETGYVPSEHAKSLRTKKTNVIGVVLPKISTETSNRLVKGMDEIFAKEGYQILLANTNLEPEKEIEYLRLLKSRHVDGIILSATTINPSLVEEIYNLNIPFVAVGQSISGLTNVILDDYQATKDMVDFLIQKGHKQIAFIGVDERDRAVGYLRKAGYLDAMRENNLAVESTWVQKGEFNVESGFECMSQILGTSEKQPTAVLAVTDRLAIGALQRIKESGLSIPEDISLAGMGASEFSRYVTPALTTIDFSIEKAGREAAALILRKIGGENDHGMNITIPYRLIERASVQ
>NZ_CP048103.1|WP_076523078.1|2003797_2004025_+|transposase
MGTRRKFSPELKAQIVQVILKEEKPLSQLSSEHGIHPVQLSKWKRKAVQNFSQLFADDRKGVNQDEGENKRGSNG
>NZ_CP048103.1|WP_009708806.1|2004170_2004944_-|CRISPR-associated-endoribonuclease-Cas6
MQLRMTLESDEPSFVLPLHYNHMIQSALYKLLDPGFATFLHEEGYVHGNRRFKLFTFSQLQGEYRLLRDEKKIRFFNPVSLTVCSPIPAFCEGVMNAIVDEKGISLGQARLRVTHIECQQPQVEDQTIIVNTLSPITVYSTLLRPDGRKYTLYFHPSEKDFAKQVQENILKKFQLVYQEAPTSPRFDMEAVGRVKQRTILYKGFIIKGYMGKFKVSADDRRLLALALDASVGAKGSQGFGCIEQVDQSLNGGEKDAG
>NZ_CP048103.1|WP_040387201.1|2005559_2006375_-|hypothetical-protein
MLWVSVAGMAPSLAWAEESPEKLSRQIDTLEREVERLKTKEERYDYLKEETTDHREFVEAEWERFLNFIYCIISIGIGIVGATLVFFNISTRKDIKKTKKEIRETAEQEFKKVLAEERSEMDHKFAVWKEMIKREMRFQNSSILVLYQQESKIKSRISRILHGENIFSFVVGPQFSLDSLLKKNKVDIIVYEYDTEAENRRDPYILGLLKQLDEYKDNPIAFIVYYPGQIEKGKILDRIRSYPWHHFANNLMALMTNIHSFSLFLHDEKNE
>NZ_CP048103.1|WP_009708808.1|2006660_2007776_-|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MDKQTGLLPLYRNDFVPGFRPPNSHTGLWYEKFCNVWSQQDGAWTLGTDKSRWIESVIGETGDQAGIRELVERMKSMVLRGSGMLLYTKTEGRFVTGLGRSHPVENGFAWHPTLGTAYLPGSSVKGLVRSWAEQWEDSVKPEDVKRIFGCQDQPSTGVGSVIFYDAIPIKQIKLEADVMTPHYGPYYQEGKAPVDWHAPVPIPFLTVAADQPFLFSLAPRRPGEHEKDVKTAMCWLKEALRWMGAGAKTAVGYGRFMVDENKQNEWKQALADQKREQEKQAKLARLARMTPVEREMEEDGYQQDPNRFMEVLAKKWLVRMEEENTPPADRMEIAQRLAEWYQTHRSNHWKKPNLKNEEKIRRIRAVLNGKS
>NZ_CP048103.1|WP_040387202.1|2007768_2008206_-|type-III-B-CRISPR-module-associated-protein-Cmr5
MSNQKRMLDLERAQFSLTKVKQMEQDFSEEEADSYANYTERLPAAILSNGLGQALAQLRAAAAGSENEKTDPHYLLYRDIQDWLCREDPRAPYAKAEDLLKALIAGDRSTYLQARAETMALLEWHKKLAVAYLKQPETVGENGNG
>NZ_CP048103.1|WP_040387203.1|2008219_2009044_-|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MKSLMMGMLAETSLHPGSGQTTGVIDLPVAREATTQYPVIVGSSLKGALRDKAKLEKWEEITQIFGSTDGAGGIAVADGRLLLLPIRSLSGHYRWITCPYILERLTRDLQMIGKEGLHVTLEPQSGEVIVAKEKKGGGEGEEFLFLEELSFKRSESEKVEDIAEGIKPLIAHESVKNRLSSQLVVLHNDDFSHFAQFGLSVQARNSLDENKRSKSLWYEETLPPDTLFYSLLMARPGQEERLNSLHRKLQAPSYLQIGGNETIGQGWCVLSMLD

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Crispr_ID: NZ_CP048103_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_7

2104540-2104621

Orphan

Consensus_repeat	Method
ACAAGTCTCGCCAGGGTCGCTTCGCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_7

>merge|NZ_CP048103|7|2104540-2104621|CRISPRCasFinder
ACAAGTCTCGCCAGGGTCGCTTCGCTCCGCGGTCTCGCTATGCACTCACCAGTACAAGTCTCGCCCAGGGTCGCTTCGCTCC

>NZ_CP048103|7|7|2104540-2104621|CRISPRCasFinder
ACAAGTCTCGCCAGGGTCGCTTCGCTCC	GCGGTCTCGCTATGCACTCACCAGTA
CAAGTCTCGCCCAGGGTCGCTTCGCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076523191.1\|2107981_2108929_-\|transketolase-family-protein	unknown	unknown	gnl\|CDD\|226467
NZ_CP048103.1\|WP_084189786.1\|2106519_2107968_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|215463
NZ_CP048103.1\|WP_076523464.1\|2100158_2101409_-\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|236456
NZ_CP048103.1\|WP_076523195.1\|2109858_2110359_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_CP048103.1\|WP_076523197.1\|2110532_2111876_-\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP048103.1\|WP_076523199.1\|2112398_2113610_+\|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377939
NZ_CP048103.1\|WP_076523173.1\|2094980_2095949_+\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380496
NZ_CP048103.1\|WP_076523185.1\|2102450_2103236_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_CP048103.1\|WP_076523193.1\|2108929_2109754_-\|transketolase	unknown	unknown	gnl\|CDD\|238970
NZ_CP048103.1\|WP_076523177.1\|2096419_2097343_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197
NZ_CP048103.1\|WP_076523204.1\|2114223_2115111_-\|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|377939
NZ_CP048103.1\|WP_076523189.1\|2104775_2106506_-\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|223107
NZ_CP048103.1\|WP_076523180.1\|2097356_2098754_-\|allantoinase	unknown	unknown	gnl\|CDD\|235732
NZ_CP048103.1\|WP_076523182.1\|2098866_2100132_-\|ArgE/DapE-family-deacylase	unknown	unknown	gnl\|CDD\|349869
NZ_CP048103.1\|WP_076523201.1\|2113811_2114198_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379258
NZ_CP048103.1\|WP_076523171.1\|2093746_2094733_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270389
NZ_CP048103.1\|WP_076523207.1\|2115519_2117112_+\|urate-oxidase	unknown	unknown	gnl\|CDD\|226174
NZ_CP048103.1\|WP_076523169.1\|2093177_2093672_-\|TRAP-transporter-small-permease	unknown	unknown	gnl\|CDD\|225632
NZ_CP048103.1\|WP_076523466.1\|2103339_2104293_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|366542
NZ_CP048103.1\|WP_076523175.1\|2096023_2096392_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309308

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076523191.1\|2107981_2108929_-\|transketolase-family-protein	gnl\|CDD\|226467	COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism].	8.08341e-133
NZ_CP048103.1\|WP_084189786.1\|2106519_2107968_-\|hypothetical-protein	gnl\|CDD\|215463	PLN02858, PLN02858, fructose-bisphosphate aldolase.	1.14048e-115
NZ_CP048103.1\|WP_076523464.1\|2100158_2101409_-\|allantoate-amidohydrolase	gnl\|CDD\|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	0
NZ_CP048103.1\|WP_076523195.1\|2109858_2110359_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	2.73765e-83
NZ_CP048103.1\|WP_076523197.1\|2110532_2111876_-\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	4.59736e-158
NZ_CP048103.1\|WP_076523199.1\|2112398_2113610_+\|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	3.35423e-41
NZ_CP048103.1\|WP_076523173.1\|2094980_2095949_+\|substrate-binding-domain-containing-protein	gnl\|CDD\|380496	cd06272, PBP1_hexuronate_repressor-like, ligand-binding domain of DNA transcription repressor for the hexuronate utilization operon from Bacillus species and close homologs, all members of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor for the hexuronate utilization operon from Bacillus species and its close homologs from other bacteria, all of which are members of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type 1 periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	9.43478e-108
NZ_CP048103.1\|WP_076523185.1\|2102450_2103236_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	1.08527e-93
NZ_CP048103.1\|WP_076523193.1\|2108929_2109754_-\|transketolase	gnl\|CDD\|238970	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the pentose phosphate pathway and provides precursors for nucleotide, aromatic amino acid and vitamin biosynthesis. In addition, the enzyme plays a central role in the Calvin cycle in plants. Typically, TKs are homodimers. They require TPP and divalent cations, such as magnesium ions, for activity.	1.92041e-141
NZ_CP048103.1\|WP_076523177.1\|2096419_2097343_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	1.60525e-118
NZ_CP048103.1\|WP_076523204.1\|2114223_2115111_-\|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein	gnl\|CDD\|377939	pfam07905, PucR, Purine catabolism regulatory protein-like family. The bacterial proteins found in this family are similar to the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR). PucR is thought to be a transcriptional activator involved in the induction of the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression. The other members of this family are also annotated as being putative regulatory proteins.	9.88954e-38
NZ_CP048103.1\|WP_076523189.1\|2104775_2106506_-\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|223107	COG0028, IlvB, Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism].	0
NZ_CP048103.1\|WP_076523180.1\|2097356_2098754_-\|allantoinase	gnl\|CDD\|235732	PRK06189, PRK06189, allantoinase; Provisional.	0
NZ_CP048103.1\|WP_076523182.1\|2098866_2100132_-\|ArgE/DapE-family-deacylase	gnl\|CDD\|349869	cd02697, M20_like, M20 Zn-peptidases include exopeptidases. Peptidase M20 family; uncharacterized subfamily. These hypothetical proteins have been inferred by homology to be exopeptidases: carboxypeptidases, dipeptidases and a specialized aminopeptidase. In general, the peptidase hydrolyzes the late products of protein degradation in order to complete the conversion of proteins to free amino acids. Members of this subfamily may bind metal ions such as zinc.	2.5134e-155
NZ_CP048103.1\|WP_076523201.1\|2113811_2114198_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	9.91166e-21
NZ_CP048103.1\|WP_076523171.1\|2093746_2094733_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|270389	cd13671, PBP2_TRAP_SBP_like_3, Uncharacterized substrate-binding protein of the Tripartite ATP-independent Periplasmic transporter family; the type 2 periplasmic-binding protein fold. This subfamily includes uncharacterized periplasmic substrate-binding proteins similar to TRAP transport systems such as SiaP (a sialic acid binding virulence factor) and TeaA (an ectoine binding protein). TRAP transporters are a large family of solute transporters ubiquitously found in bacteria and archaea. They are comprised of a periplasmic substrate-binding protein (SBP) and two unequally sized integral membrane components: a large transmembrane subunit involved in the translocation process and a smaller membrane of unknown function. The driving force of TRAP transporters is provided by electrochemical ion gradients (either protons or sodium ions) across the cytoplasmic membrane, rather than ATP hydrolysis. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.71598e-151
NZ_CP048103.1\|WP_076523207.1\|2115519_2117112_+\|urate-oxidase	gnl\|CDD\|226174	COG3648, COG3648, Uricase (urate oxidase) [Secondary metabolites biosynthesis, transport, and catabolism].	5.52242e-113
NZ_CP048103.1\|WP_076523169.1\|2093177_2093672_-\|TRAP-transporter-small-permease	gnl\|CDD\|225632	COG3090, DctM, TRAP-type C4-dicarboxylate transport system, small permease component [Carbohydrate transport and metabolism].	2.35479e-26
NZ_CP048103.1\|WP_076523466.1\|2103339_2104293_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|366542	pfam01261, AP_endonuc_2, Xylose isomerase-like TIM barrel. This TIM alpha/beta barrel structure is found in xylose isomerase and in endonuclease IV (EC:3.1.21.2). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae.	1.40618e-13
NZ_CP048103.1\|WP_076523175.1\|2096023_2096392_-\|hypothetical-protein	gnl\|CDD\|309308	pfam04126, Cyclophil_like, Cyclophilin-like. This domain has a cyclophilin-like fold, consisting of an eight-stranded beta-barrel with an alpha helix located between the beta-2 and beta-3 strands and a 310 helix located between the beta-7 and beta-8 strands. The catalytic site found in human cyclophilin is not conserved in this domain, suggesting a different function for this domain.	2.23477e-43

>NZ_CP048103.1|WP_076523466.1|2103339_2104293_-|sugar-phosphate-isomerase/epimerase
MKGDLQHYMQVGIVHFMAYPETMGGEGPILETVNRIVTDDFFSAIEITRVNQAEKRKQVAQLLESGRMTVGFGAQPVLLGNKADLNAFDEEKRKAAIDLVKGAIDQAYELKAGKLGLLSGPKPAQNQEKAVQLLVDSLTELCKYAKSKGDLVLSLETFDDATDKKRLIGPNSLAVEVAQEVRKTDPSFGLMLDLSHLPMQRETSESALHTARDYLNHAHIGNCYIDDPADPAYGDEHPRFGYPGSENDVDELTEYLRVLLEIGYIGEGSDNVVAFEVKPVGGESSDAIIAQSKRTLIRAWNRMERAKQTLTAAWNKV
>NZ_CP048103.1|WP_076523185.1|2102450_2103236_-|IclR-family-transcriptional-regulator
MAKDNIIQSVDRALKILEVLSTRKEGYGVTELSHILPLNKTSVYRMLSTLVLHGFVEQDLETERYKLGYKVLELSSILLDSIDLRMEAKAYLKEVERLTNEVVHLVVYDRGEAVYIEKLEGNETLRMHSKVGSRAPMHCSGVGKVILAHLPEQEAVQIIERYGMAAHTAHTITDRELLFDHLRMIRKKGYALDLEENELGINCIAGPIFDHSGRVVAAVSISGPTMRMTKERIDQLKDGIIAVSKKISKRLGWRGDHIPQQ
>NZ_CP048103.1|WP_076523464.1|2100158_2101409_-|allantoate-amidohydrolase
MHKQKTTHRYLSADRMVGRIEALAKCSASAGPGVTRLSFTRESEAANQLVAGWMRDAGMTVRRDEAGNLIGRYEGTRTDAPVLLIGSHLDSVIEAGKYDGILGVIAGLEVVQALDEGGVRPEHPIEVIAFCDEEGARFHTTLLGSRAICGMLGREDLEAKDEKGVTLATAMKEVGLDPERIHLATRAPRQLLGYLELHIEQGPVLEKMDQACGIVTGIAGQSRLRFLVKGSAGHAGTVPISMRKDALVGTAEMVHSMERIALQYPSLVATVGQLSVHPGASNVIPGQVEGTLDIRSIDDKARLEALDRMMDTCQLIAGRRGLNCEFTKIMESSAVACSEPMIRTIGSVFQDHGMKPIQLVSGAGHDAMAVSSLTEMGMIFVRCKGGISHHPDEAVTPEDMKTGAAILLDVTLQLVS
>NZ_CP048103.1|WP_076523182.1|2098866_2100132_-|ArgE/DapE-family-deacylase
MDTAQLSTEKRGIMEWIESERENLVQFLQELVAIPSDNPPGDCYEIAEHTQKRLQDFQFEDVSLLEVEPEKVKEKGMIRVANVVSKTGFGNGEGPDIVLNSHGDVVAPGSGWTYDPYGGKIVDGKLYGRGAAVSKSDIATYTFATMALRPFADQLSGKVTLAYTFDEEVGGLLGPKWLLDQGHIDPDLAISAGFSYSIVNAHNGCLHLEIKLKGKSAHAAAPHTGHDALEAMTGVLQAIYEYRDTLKEIHSNVPGIDSPAITVGLITGGINTNVVPDECTIRIDRRLIPEEDAGKVETEIRRLVERKAGEYEGIRVEIRQVLLAKNFGPTPEDSPLVQTLAANWKEVMKKDEVEIDGIPLYTDGRLFAEAGIPTVLFGAGPRTLLEANGHRADEHVRVDDLVKATQIVALTLYDLLRKNAR
>NZ_CP048103.1|WP_076523180.1|2097356_2098754_-|allantoinase
MPVAGKYDLVIKGGNVVLLDEVRNLDIAVKNGMIVELAEQISGDGENVLDASGQYVLPGMIDAHVHFNEPGREDWEGFRHGSGLLAAGGCTTYFDMPLNNIPSTVDVAALLDKANRGGSESRVDFALWGALVPGNEEELEGLANHGVIGFKAFLSPTGTPEFEAVDDLTLYRGMKRIAGLNRILALHSESAPIIHCLEAEKKGTTVRDYCETRPVLAEMEAVSRALLMARETGCSLHFVHISSARTVRLIQEAKAAGLDVTLETCPHYLLFNIEDFERLGSVAKCAPPLREEAERLQLWEALVSGQIDMITSDHSPCPTSMKTAHEHDMFQAWGGITGGQFSLEAMIDQGHVERRLPLTQIARWTAIHPAKRFGLYPRKGVLSVGSDADLALVSLNQDHLITEQDLLSRYRHSPYIGRRFRCRVTATIQRGTIVYTLRDGVMEQPRGQWLQPCEAAQAEGRTIKA
>NZ_CP048103.1|WP_076523177.1|2096419_2097343_-|2-hydroxy-3-oxopropionate-reductase
MRVGFIGLGIMGKPMARNLIRAGYKLVVHNRTVSKADELVREGAEAAENPRRVAEKSDVVITMLPDSPDVKKVVEGVDGIFEGAREGSLLIDMSTISPVVSRELSRKARERNLGMLDAPVSGGEPGAEEGTLSIMVGGPVQDFDRARPLFKVLGRTITHVGEAGAGQVVKACNQIVVASVIGAVSEALVLGAKAGVNPELIIDTLSGRLAGNKVMEVRRSNFLEHDFKPGFKLDLHHKDLGIALAAGRKYGVSLPLTSVADQLQGALVAKGRGKEDHIAMLTLIEEMARYRIDDWAGQSREQTMAGE
>NZ_CP048103.1|WP_076523175.1|2096023_2096392_-|hypothetical-protein
MKKIRLHVNQHHLHGILYDTPAGRAIWENLPVTAKGNTWGEEIYFSIDADVKMEKGTEIVEEGDLCYWPPGSAFCIFYGQTPASLEGEIRPASAVEVVGKITDDVEVLKQVNGLPKVMVARE
>NZ_CP048103.1|WP_076523173.1|2094980_2095949_+|substrate-binding-domain-containing-protein
MGITIKDIAKAAGVSYSTVSKALNDSPLVKKETKQKILRVADEMGYQPNIAAKKLVSNESRTIGVVWPTVERVALTTLAAKINAALEQQKYHMLLSINPTKTAVDLFNRFQVDGVLVFGEEAHEEIISSSIPLLYYGEPGPATYPTIDVNRRKAIQLGVRHLVQLGHSRIAYIGDLNPQHSNQREKATGYTLGMEEAGYSHLHEAVDSRGLSWQAGYQAVKQLLSKKKPTALISASYDLTVGIIRGIKELHLTIPQDISLVSYDHIPEMEKLDVPVTAVGTPVQTIATEITNHLLQLASGKKVPPAILDVELFQRQSSRSPE
>NZ_CP048103.1|WP_076523171.1|2093746_2094733_-|TRAP-transporter-substrate-binding-protein
MKKVAWAILLASLLVGLTACQNGNGADGKVVLKLAENQPNDYPTTIGDKAFAEEVEKKTDGRIKVEVHAGGDLGDEKSVIEQVQLGSIHMARVNVVPLSEYTHEIGVLTLPYLFPDEETMWKTLTGSVGDELLKTMEKDQLVGLTYYDSGKRGFYNSKRPIRTPKDLKGLKIRTHQSKLAIDTANSLGASATPMSYEEVYSAIQNGVIDGAENNYPSYFSSSHYEVAKYYTTDGHSTAPEVLMISKSVWDSLSAEDQKVLREAARNSMDVQRKAWNDLVEKSKENVKKNGNEVVEIKDLTPWRKAVQPVYDKHGKEYKQWLDKLEQVK
>NZ_CP048103.1|WP_076523169.1|2093177_2093672_-|TRAP-transporter-small-permease
MTVLFRIEKWIDIIVSRLIQILLLLTVIIVSLQVALRYLFSFTPSWSEEITLVFIIWVSFIGIAYGFRENLHIAVELVASRFPETWQKGLDWLTRLMVLVVGGLFLYFGTQFTILMSHTTMPGTHLPLATLYFCVPVSGLLMILYTITGVMKTGDPAEMKEGMD
>NZ_CP048103.1|WP_076523189.1|2104775_2106506_-|biosynthetic-type-acetolactate-synthase-large-subunit
MAKQKMLAAEAIALFLEKKGVEHIYGVPGAAILPFYDAIREKTNIKSFVVRHEQTGAFMADGYSRATGKVGVCAATSGPGGTNLLTGLYGAYMDSVPMLAFTGQVTVPLIGSMAFQEAPVTEMAKPVCKAVYQPTDPHRIPEMIHEAWETATTGRKGPVLIDLPQDVQKVEIEVDLDAFTSVPEKLPEATDQDIAQVVDLLKRAKKPVLLSGGGVNLANATEELKQLAETLQIPVVTALMGIDTFPNDHPLFAGRMGTMLNTPYGNKTILESDLIINLGGRFGDRSTGRTDVFKRDAKIVHVNLDKKEIGKSVETEVGVVADVKSFMVKLTGAVKAAKSEIAVTVSDGVKKLDLTEERKRHARKTDFETLPIKPQRALRELREFLDRDAFVSHDCGISQIWSCQLFETYVPRTYLITGGAGTMGWGLGAAMAAKLAYPERQSVNIVGDGSLSMSLQDLATAAKFEIPVIVFVLHNALLGLIRQQQNWFYEERDISTDLIYRNELSDNEERGIDFVKTAEGMGVRGELVTHWKDIKPALQRAQELNKPYLIEVVVDPKAVCGFANDGTLRGIDYSQN
>NZ_CP048103.1|WP_084189786.1|2106519_2107968_-|hypothetical-protein
MNPTSNRKSVDELSRAYPPLNREKGLRQKIARLWERKNHKIIVLDDDPTGVQTVHDLFVITDWSKEWIRKGLLDRRNVLFILTNTRSYQPEKAAAINREVMGNLTEVARELNLEFSVISRGDSTLRGHYPLEIDVIRGELSRLSGTDFDGHLIIPGFFEGGRYTLDDTHYLREGEYLIPVHETEFARDEVFGFSSAYLPGWVVEKGGAGSLQEVLTIGLEDIRIGGADQVYNILLSVRDQRPVIVNAACYEDLDVVSVALIRAMEAGKRYLFRTAASFVKSFAGIGERAFLSAEELTADQGKNHGGLIIVGSHTKKTTDQLGELIKRYPVRTMEIDVAKILQDASRVEEEVRIIKALEEAVAGGRDTVLYTSRQVVTAANKHDNLSISQQISGSLASLVGSLRVTPKFIVAKGGITSSDIATQGLKIKKAKILGQATFGVPVWLTGPESRFPNTPYIVFPGNVGDQFTLSEIVGKIATNRLK
>NZ_CP048103.1|WP_076523191.1|2107981_2108929_-|transketolase-family-protein
MTTMAAPREGYSQALIQLGKQHEDLVVLDADCAKSNMTNLFKQEFPDRFFNIGISECDLVGTAAGFALAGKVPFANAYANFLTGRAFDQMRISVCYANNNVKVVGHNAGTSPAQEGATHLPLEDISLMRSLPRMTVVVPADAVEMEKAVKAAYHFEGPLYLRVGKLPVPIVTQRDDPFQIGKAIHYRRGSDVSIISTGIMLDETFKAAEELEKRGIHADVLHVHTIKPIDVDAVVQSATRTGRVVTVEEHSIIGGLGSAVAEVLAEHQPTPLRRVGTQDRFGVSGKMDELLDFFELRAARIIKSVEGLMETAEAL
>NZ_CP048103.1|WP_076523193.1|2108929_2109754_-|transketolase
MSFTAEKLTRYTELSKRIRRHIVRMTHHAGSGHPGGSLSATELLTVLFFEHMNVDPKNPDWADRDCFFLSKGHCTPVYYSVLAEKGFFPVEELMTFRDVDGRLHGHPCSEHCPGVDISSGSLGQGLSVANGVALSAKLDGKSRRAYVMIGDGEAQEGQVWEAAMTTPHFGLDNVCAILDWNKIQLDDYVEDVMGLGDFAGKWKSFGWHVVEIDGHDLSEVDDAFREAKRTKGKPTAILAHTVKGKGISYMENTHKWHGLAPDDDELEMALKELV
>NZ_CP048103.1|WP_076523195.1|2109858_2110359_-|thiol-peroxidase
MSQFTLQGKPITLLGNRVKKGDQAPDFTVLAHDQKPVSLRDTGGGVRIFCAVPSLDTPVCDQQTRRFNEEAASLDDVTIWTVSVDLPFAQNRWCGAAGIEKVQTVSDHRDLSFGNAYGVVIKELRLLARSVFVVDRSDRLVHVEYVAEMSQYPDFEAVLEAAAKAG
>NZ_CP048103.1|WP_076523197.1|2110532_2111876_-|purine-permease
MGKMSSWKMILLGFQHVCVMYGGAVAVPLMIGPAIGLSQQQLVYLISFDLVTCGIVTWIQVIGGRYYGIKLPALMAVSFVVVEPVIAIGKIHSITGVLGAVIVSGVVVTILAQFFGKIVKYFPPLVTGSVVLIIGTSLMPVAMNNAAGGAGASDFGHAHNLLLAVFTLICFLILNHYLRGFMKTIAVLISMVIGSFVGAFMGLVDVGVMAKASWFTMVTPFYFGMPTFQLSSILAMSVIAIIIMIESVGVFMALGEFCDRKVGEEEIKKGLRAEGIGGVISGILNSFNHSTFSQNVGLVFLTGVKSRYVVITAGGILILLGLMPKVAALTTMIPKPVLGGAMIPMFGMLISAALRMILKSDLTKTTNQLIVAVGVGVGLAVKGVPDVFAGYPDLIQLLFGNGVVMGSIMLFVLNLFLNGPEEEVEKAEPTAGERDDSLKSVEPEATL
>NZ_CP048103.1|WP_076523199.1|2112398_2113610_+|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein
MPLTAAEVLKIQELDHCRLIAGHRGLNRHIRTVSIMDSPDTPLWLKPGELLITTGYVFKDDTNLQIRLIQELADRNCAGLAIKIKRFLPSIPEPMHREADRLNLPLFEIPYDMSLSDVLYTLTREILDRRHPEYDTRRTRFFTGLLRGELSDRTNVWNRGRDYGLLPRCEYIVLCMMIHPNPEEESPSSARTDFKELVREAESSLNVYLLGISRDDDIVILQSRRTTGPPSSSLARKVANLFLERFSVKSEQTITVGIGTPQSDILHLHKSYREAKEAIDLGRRIFSKTNEGIYEYTDLEPESLLQHLPGNVLTQYVTSTLEVLKRYDRENGTELLHTLELYLNCGRRLGDTARKLYVHRNTVKFRINRIEELLGTDLSDGEAAFRLQLGLRVARLLNGPDRP
>NZ_CP048103.1|WP_076523201.1|2113811_2114198_-|helix-turn-helix-domain-containing-protein
MLQNVPADILSSYVSEILTPLIRYDQENHSNLVQTLEVYLAHSGRSSETARSLGIHRNTVNFRMTRIKALLNLDLADGETVFRLQLALHMSHLLGLSVKNAERSQQGSDGSVIWVRGGEEKCRGGCST
>NZ_CP048103.1|WP_076523204.1|2114223_2115111_-|PucR-family-transcriptional-regulator-ligand-binding-domain-containing-protein
MLTMAEVMRIPPLDGCSVIAGHRGLTRRVQSVNSFDAPDVVPWYKAGELVLTTGYVIRNDEVAQVKLVQQMAQRNCAGLGIKVNHFSSEFSTLLLQAAEEHDLPLFEIPGHLSLSDLVFPLLRELFTFQDRHKEQTRRKRFFAGLLQEEWTSRDEVLARGKEFGVLPGHGFICIYVSQGSPHSGDRLTDPRRLPEFIHFSGENTGVDWMMSQPGDAVIILQSPLEGEACELPVTARKLAGDLIDHRRVSDSEGGVIIGIGTYQDDVMGISTSYRKAREAARLGCRVAPPRQARGI
>NZ_CP048103.1|WP_076523207.1|2115519_2117112_+|urate-oxidase
MRLSLEDLNRMDQTTFTVTLGWIFEHSPWVAERAWKNRPFSSLDALHQALQSVVEEATMAEKLNLLRAHPELAARVKMADASVREQAAAGLDQLTQNEYEDFTALNQAYSQRFGFPFIIAVRGKNKNEIQAALWKRLGAEPEAELENALQEIYKIARFRLEDVIGKKTDGIPGQTDERPQWNKKSAPTDAIPQLRSDSMQTEPTQRKRVMFYGKGDVFVYRTYAKPLVGVKQIPESTFTKKENVIFGMNVKIALHGDKFLSSFTEGDNSLVIATDSMKNFIQRQAAHYEGSTIEGFLEFVCKRFLEKYPHVTSIDISADEVPFDPCIVPGEFGMQGSGLVYRHSRNEHATVSMEVTRGPQGYEISRHQSGISDLHLIKVSGSSFYGYIQDEYTTLKEAYDRPLFIYVNIGWRYGNVADASGADPSRYVPAEQIRDIARTVFHELNNRSIQHLIYHIGRRILQRFPQLAEVQFETNNRTWFTVVEDIPDSQGGVFTEPMPPYGFQGFTMTRADLGETTTEGEPALVGVETR

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Crispr_ID: NZ_CP048103_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_10

2250373-2250493

Orphan

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTACGTTATAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_10

>merge|NZ_CP048103|10|2250373-2250493|CRISPRCasFinder
CGTTCAATTCCTTATAGGTACGTTCTAAACGGTACTCCACGATTCAAGACAACACGCCCGCACTGTCCTGCCAAGACTTTTCAAAATAGTGTTTCAATTCCTCATAGGTACGTTCTAAACC

>NZ_CP048103|10|10|2250373-2250493|CRISPRCasFinder
CGTTCAATTCCTTATAGGTACGTTCTAAAC	GGTACTCCACGATTCAAGACAACACGCCCGCACTGTCCTGCCAAGACTTTTCAAAATAGT
GTTTCAATTCCTCATAGGTACGTTCTAAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	unknown	unknown	gnl\|CDD\|235407
NZ_CP048103.1\|WP_084189799.1\|2248324_2248792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_143457014.1\|2261885_2262113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523303.1\|2243699_2243975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523301.1\|2243397_2243598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	unknown	unknown	gnl\|CDD\|319781
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP048103.1\|WP_009709037.1\|2248782_2248926_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.61771e-31
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	gnl\|CDD\|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.25055e-50
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.63087e-38
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	9.3246e-76
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.57027e-141
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.3896e-88
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	0.000147576
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43981e-87
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.65032e-76
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.4644e-119

>NZ_CP048103.1|WP_009709037.1|2248782_2248926_+|hypothetical-protein
MALTDLPAIKPSKGVNFLFTAFLVVFIFFFTQPKSTDVSPGSNGNLV
>NZ_CP048103.1|WP_084189799.1|2248324_2248792_+|hypothetical-protein
MRKKRMNLRARKTVHSLYQDMNLITAALLLTGQLTIGGLFVNPAGGFAIPLTGPITGGTRTEGKSGSRAATLMIDVIDIIIVILLLIDQISVRSTFVTSGGTFAVVVSGPIFGLPKIEADLPTRKRFFAHFGEHLTPPDHPSVPKRRKRRGHAWL
>NZ_CP048103.1|WP_040387239.1|2247639_2248119_+|CarD-family-transcriptional-regulator
MFQVGDKIVYPLHGAGVIDAVEEKEILGKKQRYYIIHMSLGNVQIMIPADRIDDMGLRHIVDPDTMENVFLLFNDDPSASSGSWNQRFRMNMDKMKTGDIFKTTEVIRDLAQINKEKSLGTGEKKLLDNAKQILISELVLVKEIEEEQAIQLLDEAAHC
>NZ_CP048103.1|WP_040387238.1|2247136_2247337_-|cold-shock-protein
MIEGTVKWFNADKGFGFIEVEGRDDVFVHFSAIQSEGFKSLDEGDKVSFEIVQGNRGDQAANVVKL
>NZ_CP048103.1|WP_084189798.1|2245718_2246435_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MTQTIAIISAMPEEVEPLRQQLGIGEPEQVGGLELSMTEWNGLQVITAVSGIGKAQAGACMQYLITRHHPTEVVNIGAAGALSDRLRIGDLVLVEESIYHDVDCTGVGQPPHTFPGVPRVIPSDPALVRTLSHVAANLGIPCHSGRVATGDAFVSDKEQRLSIRRETEAVLVEMETAAFAQIAHLNGVPFVSVRSVSDNADGGAEVSFQTFLTEVSKRNATLLEAYLRAKAEQESSRH
>NZ_CP048103.1|WP_076523305.1|2244112_2245468_-|glucose-6-phosphate-isomerase
MGKGLRFDYSSALAFFGPHELEQMAPAVQMAHDQLHGRSGAGREVLGWIDLPETYDREEFKRIRIAADKIRSDSDALVVIGIGGSYLGARAALEMLTHTYYNEQPPGERRGPEIHFAGNHLSSTGLVHLLQHLKGKRVSLNVISKSGTTTEPAIAFRILKEWMEQQYGREGARKRIYATTDRKRGALKQLAETEGYETFVIPDDVGGRYSVLTAVGLLPIAAAGIDLDQMMAGAREAGVAFGAPDLMENDAYQYAAIRNILYRKGKHVELLVHYEPALQYFSEWWKQLFGESEGKDGKGIFPASVQFTTDLHSMGQYIQEGHRNLFETVIQVEQPSESLTIGKDPDNLDGLNYLAGRTMDEVNRKALEATMLAHTDGGVPNLRLRIPEISPFNFGEMVYFFEKACGISGYLMGVNPFDQPGVEAYKRNMFALLGKPGFEGEGEKLNRRLNP
>NZ_CP048103.1|WP_076523303.1|2243699_2243975_+|hypothetical-protein
MKKTEKVKETKKVKETKKAKTSTDGKSKKGAKQTTPKGKQTKKSPPKKKVNIKKEARRKKKQAELGVELLYVFCGFILAGAILFISSLVRG
>NZ_CP048103.1|WP_076523301.1|2243397_2243598_-|hypothetical-protein
MVENKLHHLKFNIISSSGRVNLGDTVNVRSQVKFYLVGRGFVIGDCTGTSYGMRNQQVDPDSADQS
>NZ_CP048103.1|WP_076523299.1|2242162_2243146_-|galactose-1-phosphate-uridylyltransferase
MELRYNPLLDDWTMVASNRKDRPTLPRTDCPFCPGSGKVPDSYEVLKYDNDFPALMPDPPAPDPVGSAFYRTEKAHGKCEVILYSPEHQVTLPELPVPHIEKLVDLWTERFAELEKDPRHQYVLIFENRGEEVGVTMPHPHGQIYAYSRMPLKIQRELSSCKAHHERTGRCLICEMNREEVKFQGRVIAENDHFLAYLPFFTDYPYGLFIVSKQHLTALTDFSRSQKRSLAGILKEMTGAMDSLFNRPFPYMMVLHQRPVNGEDVEKYYHFHIEFYTPLRERDKIKYYASSEMGAWAACNPSSVEETAAELREAHRRFLEQEGGGLR
>NZ_CP048103.1|WP_009709026.1|2240975_2242166_-|galactokinase
MRGGEAAREAFKGVYGPGEVRLFFAPGRVNLIGEHTDYTGGYVFPAALTLGTWAALRPRKDGVFRLASTRFAERAEFRADEVRERREEGWTNFPKGMIRELADSGAGLPGADILYHGDLPPGAGLSSSASIGLVTGVALAALEDRRWRMLDLIQMVRRSENRYIGVQCGIMDPFASGMGKAGHAILLHCRRLDYRHVPLKLGDYRLMIIHTNKVRELAESRYNQRRRECEEGFRQLRQRLPEATDLGSVGEEAWLEAREAVESPLLRRRLAHVVTENARVLRSEQALVAGDLHRFGELMKESHRSLRENYEVTGRELDTLFEAAIQVPGCIGARMTGAGFGGCTVNLVHREALETFRRRVGEQYIAETGREPVFHETAIGDGAREIGEEEQAWQCW
>NZ_CP048103.1|WP_076523497.1|2252464_2253703_-|threonine-ammonia-lyase-IlvA
MSVEEIIVANHILKDVIIHTPLQRDPVLSAKYDCDLYLKREDLQVVRSFKIRGAYNVIRHLDPQKLERGVVCASAGNHAQGVAFSCQSLQIPGRIFMPSTTPKQKVSQVKRFGGSFVEVVLTGDTFDDSLAEALRYGEEKGMEFIHPFENPLTIAGQGTVGLEILNDLQEPVDYLFVGIGGGGLAAGVASYVKSLSPDTRVIGVEPAGAPSMKSSVEAGRVIELNEIEKFVDGAAVRQVGELTHAICRETVDEFTLVPEGKVCTTILNLYNENAIVAEPAGALSIAALDGFREQIRGKTVVCVVSGGNNDIDRMQEIKERSLIHEGLKHYFSVNFPQRAGALREFLDEVLGPDDDITRFEYTKKNSKENGPALVGIELKRKEDYAPLIDRMNRKGFHYIEINKDPHLFNLLI
>NZ_CP048103.1|WP_009709041.1|2253923_2254832_-|LysR-family-transcriptional-regulator
MDSHLRVFVTVAEKKNFSRTAEELHMTQPAVSQYIQALERTVGAKLIERNNKFVCLTKAGDIVYHHAKEIMGLYTHMQSLVDDLMQVASGNLSIGASYTFGEYILPHVIARLHGRYPLIQPTVTIGNTTEIAESVADRRLDVGIVEGEFNHERLNTESFAKDWMVIIVPADHPLTRQKEVTVPDLKKENWIVREKGSGTREATEKMFKKLGFTPDHLMEFGSTQLIKESVEAGLGISFLSNWAVRKEESLGTIHLLKMDGTPIPRKFTWITQDTPFQTKALEVFIDEMRRLETLFSTDDPRQ
>NZ_CP048103.1|WP_009709042.1|2254954_2256001_+|putative-sulfate-exporter-family-transporter
MSEQALENVQHQDMETKPSGTNRRKGWIGGIIFTFVIAVLGYGLSHLPGFDRIGPLASAIVIAVAFRQFSGYPESIRPGIQFSSKKLLRFAIILYGLRLNIEVVLHDGLPLLVRGAGTILFAIGLTLLLARWLKANTAISLLLGVGTGVCGAAAIAAVSPILKNKDEDTAISVGIIALVGTCFAIGYTLIKPFVPLDSIQYGIWSGISLHEIAHVALAAAPAGQDALAIALLAKLGRVFLLVPLCFIFMYWMKRKNNGEADAHIEFPWFLVGFILMSFVGTYLLGKAIPVSESVMDGLSQTATLILTMAMVGLGLNVNLRDLRSKALRPLIAMVITSVLLSVVTFFVS
>NZ_CP048103.1|WP_040387961.1|2256099_2256939_-|diaminopimelate-epimerase
MRFTKMHGLGNDFIVVTADTWPQEAPELARRLCDRRFGVGADGLVFLLPSRAGDVRMRILNADGSEAEQCGNAVRCVAKYYYERISGAKKEIIVETGAGLQSVRLETDGSQVESICVDMGRPILEADRVPVALEGERVVAHPVKIGEESFRFTAVSMGNPHAVIFVDDAAAFPVETWGPRLETHPLFPNKTNVEFVTVHSPRELEMRVWERGVGPTLACGTGACASLVAAVLNGTADRRARVRLKGGDLEIEWREGDDRVYMTGPARTVFEGEWNEGSG
>NZ_CP048103.1|WP_172998917.1|2257092_2259870_-|calcium-translocating-P-type-ATPase,-SERCA-type
MVSMRCFWDKGGGNVSEGSRYLDWDMEKLTAHFDVDPAEGLEDTEAEKRKEKVGPNQLAEGKRLSPLALLLNQFKDFMVLVLLAATLISGLLGEYTDAIAIIAIVLLNAVLGFIQEFRAEKSLTALKELSAPMARVKRNGSWKRIPAAELVPGDIVSLESGDRIPADLRLIHAENLYIEESALTGESVPVSKTGSVIRGGEEVPLGDRKNMAFLGTMAVRGTGIGLVVFTGMKTEMGKIAHLIQTTESMQTPLQNRLEQLGKVLIVVSLFLTAVVVLTGIIHGHDAYKMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIRRRAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTHLWVDGRRLEVSGSGYEPEGEFTFDGRKVNPGRDPGLKRLLEVAVLCNNARLIRESNREGMLRRKQESWRIDGDPTEGALMVVGAKGGHTGESLEKEWKRVREFPFDSERKMMSVLVEKGKGERILMTKGAPDVLLNRCTHLLQGGRPVPLTEAMREKILSHNDQLAAMALRNLAFACREWKGAEPGRESEAERELVFVGLAGMIDPPREEVKKAIRTCRRAGIRTVMITGDHQTTAVAIARQLGILTEGGLTVNGNELQRMSDREFEQKAKHIQVYARVSPEHKLKIVKALQKDGDVVAMTGDGVNDAPAIKAADIGIAMGITGTDVSKEASSLILSDDNFATIVSAIEEGRSIYDNIRKFISYLLASNVGEILVMFLAMLAGMPLPLVPIQILWVNLVTDGLPAMALGVDPGEEDTMDRPPRNSRESIFARGVGWKIVSRGLLIGTFTLASFWVAYHETPDDLLRAQTIAFATLVLAQLVYVFDCRSSQSVFHRNPLNNLPLVLAVVSSALLLLVVMYYPPLQPVFHTVALGFREWALVVAASTLPTLLAGLIDLVRPIRRPAHS
>NZ_CP048103.1|WP_009709046.1|2260080_2261787_+|fibronectin/fibrinogen-binding-protein
MSIDGIAIRAVVHELEELLIGGRVTKIYQPGEADLILHIRNRGRNRRLLLSAHPAYPRLHLTEQATENPLTPPMFCMLLRKHCEGGVIEGIRQVGMERIIHMDLRCRDELGDEVIRRLVVEVMGRHSNIILIDPASGKILDGIRRVTPDISRHRQVLPGLLYQAPPEQDKKDPLVAEREDFLRSLHFNEGKLDRQIVARFAGIGPQTAREILHRGGLGDREQLWSAFHTLMNEIRDHLYQPQIVYDRKPAFSVIPLTHLRGERETFDSVGRCLEAFYHGKAERDRARQQNHDLIRNLKNILDKNETKIEKLTQEWTDTEKAETHRIYGELLTSFMHQVKRGDQVLKAVNYYDPESPEVTIPLDPRLTPSENAQRYFRLYNKAKSARKWNREQIEKTRRENEYLESVLVQLQNAGPREAEEIKEELQEEGWLKAKPQKKRKKQTRKPEPDTYFSSEGIPILVGRNNKQNDFLTHRIAAPTDTWLHTKEIPGSHVVIRGKSFGEATLHEAAMLAAWHSKARESSQVPVDHTLIKHVKKPSGTPPGFVIYEEQKTLYVTPEESEIRKLKRE
>NZ_CP048103.1|WP_143457014.1|2261885_2262113_-|hypothetical-protein
MKKNQRKYRPVPARRRTSVPVVKTAAGTRIPVQTQVALGKGKPNPKTEEVLFFCPPFFFPPPFAFFGPFGAGFFI
>NZ_CP048103.1|WP_076523499.1|2262444_2262822_+|multidrug-efflux-SMR-transporter
MHWVYLIFAILFEVAGTMSMKLSHGFTKLWPSLGMVVFYILAFAGLTLSLKQMPVSIAYAVWSGLGTAVIAVLGYLIFQESMTWLKAGSILLIVLGVIGLNLGEGSDASDSPEPDRHPVETVDAE
>NZ_CP048103.1|WP_084189800.1|2262844_2263021_-|pentapeptide-repeat-containing-protein
MRRADLSYATLDGACLKGADLREAIMEGIPWKELNLEGTRIDMAQAVALAQSLGARVE
>NZ_CP048103.1|WP_159439660.1|2263545_2264502_-|polysaccharide-deacetylase-family-protein
MKGTLLRTGLFLFMAVWVGFSTAWNASYAGQAGKRLQPAPEEKSTETVKAPARSESRKAEGQTEEREPQKQAQKEEPKEKPEQQQSVQKQPDEKQVAQGTKSAREKTEKKADLPVVVYQGPNEKKRVALTFDDGPDRTYTPQVLNILKGEQVPATFFVVGKEVNRNGDVAKRIVSEGHVIANHTWSHLYLPNLPDKRVEGELDRAVQAVKKATGKEMSLMRPPYGAVKGKEERITHIGHRIINWDVDTNDWKPGRTSQQILAAVKGHTVPGSIVLMHSGGGNRSATVQALPEIIRYLKQQGYEFVTVDQLLDVPAYIN

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Crispr_ID: NZ_CP048103_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_8

2249057-2249288

Orphan

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTACGTTATAAACA	PILER-CR
GTTTCAATTCCTTATAGGTACGTTATAAAC	CRISPRCasFinder
GTTTCAATTCCTTATAGGTACGTT	CRT

3 spacers

The CRISPR arrays of NZ_CP048103_8

>merge|NZ_CP048103|8|2249057-2249288|PILER-CR,CRISPRCasFinder,CRT
ACGTTTCAATTCCTTATAGGTAAGCTTCAAGAATATGGAATCGGCAAAACGTGGGGCATCGTGGGGTTTCAATTCCTCATAGGTACGTTCTAAACACGCTGAAACTGGCTGCTGAAAGGTTGCTGGAGGAACAGTTTCAATTCCTTATAGGTACGTTATAAACAAGCCCTCCGATACTATACCAATCGAGAATTGGAGGAAGTTTCAATTCCTTATAGGTACGTTATAAACC

>NZ_CP048103|8|1|2249057-2249222|PILER-CR
ACGTTTCAATTCCTTATAGGTAAGCTTCAAGAATA	TGGAATCGGCAAAACGTGGGGCATCGTGGGGTTTCAATTCCTC
ATAGGTACGTTCTAAACACGCTGAAACTGGCTGCT	GAAAGGTTGCTGGAGGAACAGTTTCAATTCCTTATAG
GTACGTTATAAACAAG

>NZ_CP048103|8|8|2249059-2249288|CRISPRCasFinder
GTTTCAATTCCTTATAGGTAAGCTTCAAGA	ATATGGAATCGGCAAAACGTGGGGCATCGTGGG
GTTTCAATTCCTCATAGGTACGTTCTAAAC	ACGCTGAAACTGGCTGCTGAAAGGTTGCTGGAGGAACA
GTTTCAATTCCTTATAGGTACGTTATAAAC	AAGCCCTCCGATACTATACCAATCGAGAATTGGAGGAA
GTTTCAATTCCTTATAGGTACGTTATAAACC

>NZ_CP048103|8|1|2249059-2249281|CRT
GTTTCAATTCCTTATAGGTAAGCT	TCAAGAATATGGAATCGGCAAAACGTGGGGCATCGTGGG
GTTTCAATTCCTCATAGGTACGTT	CTAAACACGCTGAAACTGGCTGCTGAAAGGTTGCTGGAGGAACA
GTTTCAATTCCTTATAGGTACGTT	ATAAACAAGCCCTCCGATACTATACCAATCGAGAATTGGAGGAA
GTTTCAATTCCTTATAGGTACGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	unknown	unknown	gnl\|CDD\|235407
NZ_CP048103.1\|WP_084189799.1\|2248324_2248792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_143457014.1\|2261885_2262113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523303.1\|2243699_2243975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523301.1\|2243397_2243598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	unknown	unknown	gnl\|CDD\|319781
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP048103.1\|WP_009709037.1\|2248782_2248926_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.61771e-31
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	gnl\|CDD\|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.25055e-50
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.63087e-38
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	9.3246e-76
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.57027e-141
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.3896e-88
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	0.000147576
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43981e-87
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.65032e-76
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.4644e-119

>NZ_CP048103.1|WP_009709037.1|2248782_2248926_+|hypothetical-protein
MALTDLPAIKPSKGVNFLFTAFLVVFIFFFTQPKSTDVSPGSNGNLV
>NZ_CP048103.1|WP_084189799.1|2248324_2248792_+|hypothetical-protein
MRKKRMNLRARKTVHSLYQDMNLITAALLLTGQLTIGGLFVNPAGGFAIPLTGPITGGTRTEGKSGSRAATLMIDVIDIIIVILLLIDQISVRSTFVTSGGTFAVVVSGPIFGLPKIEADLPTRKRFFAHFGEHLTPPDHPSVPKRRKRRGHAWL
>NZ_CP048103.1|WP_040387239.1|2247639_2248119_+|CarD-family-transcriptional-regulator
MFQVGDKIVYPLHGAGVIDAVEEKEILGKKQRYYIIHMSLGNVQIMIPADRIDDMGLRHIVDPDTMENVFLLFNDDPSASSGSWNQRFRMNMDKMKTGDIFKTTEVIRDLAQINKEKSLGTGEKKLLDNAKQILISELVLVKEIEEEQAIQLLDEAAHC
>NZ_CP048103.1|WP_040387238.1|2247136_2247337_-|cold-shock-protein
MIEGTVKWFNADKGFGFIEVEGRDDVFVHFSAIQSEGFKSLDEGDKVSFEIVQGNRGDQAANVVKL
>NZ_CP048103.1|WP_084189798.1|2245718_2246435_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MTQTIAIISAMPEEVEPLRQQLGIGEPEQVGGLELSMTEWNGLQVITAVSGIGKAQAGACMQYLITRHHPTEVVNIGAAGALSDRLRIGDLVLVEESIYHDVDCTGVGQPPHTFPGVPRVIPSDPALVRTLSHVAANLGIPCHSGRVATGDAFVSDKEQRLSIRRETEAVLVEMETAAFAQIAHLNGVPFVSVRSVSDNADGGAEVSFQTFLTEVSKRNATLLEAYLRAKAEQESSRH
>NZ_CP048103.1|WP_076523305.1|2244112_2245468_-|glucose-6-phosphate-isomerase
MGKGLRFDYSSALAFFGPHELEQMAPAVQMAHDQLHGRSGAGREVLGWIDLPETYDREEFKRIRIAADKIRSDSDALVVIGIGGSYLGARAALEMLTHTYYNEQPPGERRGPEIHFAGNHLSSTGLVHLLQHLKGKRVSLNVISKSGTTTEPAIAFRILKEWMEQQYGREGARKRIYATTDRKRGALKQLAETEGYETFVIPDDVGGRYSVLTAVGLLPIAAAGIDLDQMMAGAREAGVAFGAPDLMENDAYQYAAIRNILYRKGKHVELLVHYEPALQYFSEWWKQLFGESEGKDGKGIFPASVQFTTDLHSMGQYIQEGHRNLFETVIQVEQPSESLTIGKDPDNLDGLNYLAGRTMDEVNRKALEATMLAHTDGGVPNLRLRIPEISPFNFGEMVYFFEKACGISGYLMGVNPFDQPGVEAYKRNMFALLGKPGFEGEGEKLNRRLNP
>NZ_CP048103.1|WP_076523303.1|2243699_2243975_+|hypothetical-protein
MKKTEKVKETKKVKETKKAKTSTDGKSKKGAKQTTPKGKQTKKSPPKKKVNIKKEARRKKKQAELGVELLYVFCGFILAGAILFISSLVRG
>NZ_CP048103.1|WP_076523301.1|2243397_2243598_-|hypothetical-protein
MVENKLHHLKFNIISSSGRVNLGDTVNVRSQVKFYLVGRGFVIGDCTGTSYGMRNQQVDPDSADQS
>NZ_CP048103.1|WP_076523299.1|2242162_2243146_-|galactose-1-phosphate-uridylyltransferase
MELRYNPLLDDWTMVASNRKDRPTLPRTDCPFCPGSGKVPDSYEVLKYDNDFPALMPDPPAPDPVGSAFYRTEKAHGKCEVILYSPEHQVTLPELPVPHIEKLVDLWTERFAELEKDPRHQYVLIFENRGEEVGVTMPHPHGQIYAYSRMPLKIQRELSSCKAHHERTGRCLICEMNREEVKFQGRVIAENDHFLAYLPFFTDYPYGLFIVSKQHLTALTDFSRSQKRSLAGILKEMTGAMDSLFNRPFPYMMVLHQRPVNGEDVEKYYHFHIEFYTPLRERDKIKYYASSEMGAWAACNPSSVEETAAELREAHRRFLEQEGGGLR
>NZ_CP048103.1|WP_009709026.1|2240975_2242166_-|galactokinase
MRGGEAAREAFKGVYGPGEVRLFFAPGRVNLIGEHTDYTGGYVFPAALTLGTWAALRPRKDGVFRLASTRFAERAEFRADEVRERREEGWTNFPKGMIRELADSGAGLPGADILYHGDLPPGAGLSSSASIGLVTGVALAALEDRRWRMLDLIQMVRRSENRYIGVQCGIMDPFASGMGKAGHAILLHCRRLDYRHVPLKLGDYRLMIIHTNKVRELAESRYNQRRRECEEGFRQLRQRLPEATDLGSVGEEAWLEAREAVESPLLRRRLAHVVTENARVLRSEQALVAGDLHRFGELMKESHRSLRENYEVTGRELDTLFEAAIQVPGCIGARMTGAGFGGCTVNLVHREALETFRRRVGEQYIAETGREPVFHETAIGDGAREIGEEEQAWQCW
>NZ_CP048103.1|WP_076523497.1|2252464_2253703_-|threonine-ammonia-lyase-IlvA
MSVEEIIVANHILKDVIIHTPLQRDPVLSAKYDCDLYLKREDLQVVRSFKIRGAYNVIRHLDPQKLERGVVCASAGNHAQGVAFSCQSLQIPGRIFMPSTTPKQKVSQVKRFGGSFVEVVLTGDTFDDSLAEALRYGEEKGMEFIHPFENPLTIAGQGTVGLEILNDLQEPVDYLFVGIGGGGLAAGVASYVKSLSPDTRVIGVEPAGAPSMKSSVEAGRVIELNEIEKFVDGAAVRQVGELTHAICRETVDEFTLVPEGKVCTTILNLYNENAIVAEPAGALSIAALDGFREQIRGKTVVCVVSGGNNDIDRMQEIKERSLIHEGLKHYFSVNFPQRAGALREFLDEVLGPDDDITRFEYTKKNSKENGPALVGIELKRKEDYAPLIDRMNRKGFHYIEINKDPHLFNLLI
>NZ_CP048103.1|WP_009709041.1|2253923_2254832_-|LysR-family-transcriptional-regulator
MDSHLRVFVTVAEKKNFSRTAEELHMTQPAVSQYIQALERTVGAKLIERNNKFVCLTKAGDIVYHHAKEIMGLYTHMQSLVDDLMQVASGNLSIGASYTFGEYILPHVIARLHGRYPLIQPTVTIGNTTEIAESVADRRLDVGIVEGEFNHERLNTESFAKDWMVIIVPADHPLTRQKEVTVPDLKKENWIVREKGSGTREATEKMFKKLGFTPDHLMEFGSTQLIKESVEAGLGISFLSNWAVRKEESLGTIHLLKMDGTPIPRKFTWITQDTPFQTKALEVFIDEMRRLETLFSTDDPRQ
>NZ_CP048103.1|WP_009709042.1|2254954_2256001_+|putative-sulfate-exporter-family-transporter
MSEQALENVQHQDMETKPSGTNRRKGWIGGIIFTFVIAVLGYGLSHLPGFDRIGPLASAIVIAVAFRQFSGYPESIRPGIQFSSKKLLRFAIILYGLRLNIEVVLHDGLPLLVRGAGTILFAIGLTLLLARWLKANTAISLLLGVGTGVCGAAAIAAVSPILKNKDEDTAISVGIIALVGTCFAIGYTLIKPFVPLDSIQYGIWSGISLHEIAHVALAAAPAGQDALAIALLAKLGRVFLLVPLCFIFMYWMKRKNNGEADAHIEFPWFLVGFILMSFVGTYLLGKAIPVSESVMDGLSQTATLILTMAMVGLGLNVNLRDLRSKALRPLIAMVITSVLLSVVTFFVS
>NZ_CP048103.1|WP_040387961.1|2256099_2256939_-|diaminopimelate-epimerase
MRFTKMHGLGNDFIVVTADTWPQEAPELARRLCDRRFGVGADGLVFLLPSRAGDVRMRILNADGSEAEQCGNAVRCVAKYYYERISGAKKEIIVETGAGLQSVRLETDGSQVESICVDMGRPILEADRVPVALEGERVVAHPVKIGEESFRFTAVSMGNPHAVIFVDDAAAFPVETWGPRLETHPLFPNKTNVEFVTVHSPRELEMRVWERGVGPTLACGTGACASLVAAVLNGTADRRARVRLKGGDLEIEWREGDDRVYMTGPARTVFEGEWNEGSG
>NZ_CP048103.1|WP_172998917.1|2257092_2259870_-|calcium-translocating-P-type-ATPase,-SERCA-type
MVSMRCFWDKGGGNVSEGSRYLDWDMEKLTAHFDVDPAEGLEDTEAEKRKEKVGPNQLAEGKRLSPLALLLNQFKDFMVLVLLAATLISGLLGEYTDAIAIIAIVLLNAVLGFIQEFRAEKSLTALKELSAPMARVKRNGSWKRIPAAELVPGDIVSLESGDRIPADLRLIHAENLYIEESALTGESVPVSKTGSVIRGGEEVPLGDRKNMAFLGTMAVRGTGIGLVVFTGMKTEMGKIAHLIQTTESMQTPLQNRLEQLGKVLIVVSLFLTAVVVLTGIIHGHDAYKMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIRRRAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTHLWVDGRRLEVSGSGYEPEGEFTFDGRKVNPGRDPGLKRLLEVAVLCNNARLIRESNREGMLRRKQESWRIDGDPTEGALMVVGAKGGHTGESLEKEWKRVREFPFDSERKMMSVLVEKGKGERILMTKGAPDVLLNRCTHLLQGGRPVPLTEAMREKILSHNDQLAAMALRNLAFACREWKGAEPGRESEAERELVFVGLAGMIDPPREEVKKAIRTCRRAGIRTVMITGDHQTTAVAIARQLGILTEGGLTVNGNELQRMSDREFEQKAKHIQVYARVSPEHKLKIVKALQKDGDVVAMTGDGVNDAPAIKAADIGIAMGITGTDVSKEASSLILSDDNFATIVSAIEEGRSIYDNIRKFISYLLASNVGEILVMFLAMLAGMPLPLVPIQILWVNLVTDGLPAMALGVDPGEEDTMDRPPRNSRESIFARGVGWKIVSRGLLIGTFTLASFWVAYHETPDDLLRAQTIAFATLVLAQLVYVFDCRSSQSVFHRNPLNNLPLVLAVVSSALLLLVVMYYPPLQPVFHTVALGFREWALVVAASTLPTLLAGLIDLVRPIRRPAHS
>NZ_CP048103.1|WP_009709046.1|2260080_2261787_+|fibronectin/fibrinogen-binding-protein
MSIDGIAIRAVVHELEELLIGGRVTKIYQPGEADLILHIRNRGRNRRLLLSAHPAYPRLHLTEQATENPLTPPMFCMLLRKHCEGGVIEGIRQVGMERIIHMDLRCRDELGDEVIRRLVVEVMGRHSNIILIDPASGKILDGIRRVTPDISRHRQVLPGLLYQAPPEQDKKDPLVAEREDFLRSLHFNEGKLDRQIVARFAGIGPQTAREILHRGGLGDREQLWSAFHTLMNEIRDHLYQPQIVYDRKPAFSVIPLTHLRGERETFDSVGRCLEAFYHGKAERDRARQQNHDLIRNLKNILDKNETKIEKLTQEWTDTEKAETHRIYGELLTSFMHQVKRGDQVLKAVNYYDPESPEVTIPLDPRLTPSENAQRYFRLYNKAKSARKWNREQIEKTRRENEYLESVLVQLQNAGPREAEEIKEELQEEGWLKAKPQKKRKKQTRKPEPDTYFSSEGIPILVGRNNKQNDFLTHRIAAPTDTWLHTKEIPGSHVVIRGKSFGEATLHEAAMLAAWHSKARESSQVPVDHTLIKHVKKPSGTPPGFVIYEEQKTLYVTPEESEIRKLKRE
>NZ_CP048103.1|WP_143457014.1|2261885_2262113_-|hypothetical-protein
MKKNQRKYRPVPARRRTSVPVVKTAAGTRIPVQTQVALGKGKPNPKTEEVLFFCPPFFFPPPFAFFGPFGAGFFI
>NZ_CP048103.1|WP_076523499.1|2262444_2262822_+|multidrug-efflux-SMR-transporter
MHWVYLIFAILFEVAGTMSMKLSHGFTKLWPSLGMVVFYILAFAGLTLSLKQMPVSIAYAVWSGLGTAVIAVLGYLIFQESMTWLKAGSILLIVLGVIGLNLGEGSDASDSPEPDRHPVETVDAE
>NZ_CP048103.1|WP_084189800.1|2262844_2263021_-|pentapeptide-repeat-containing-protein
MRRADLSYATLDGACLKGADLREAIMEGIPWKELNLEGTRIDMAQAVALAQSLGARVE
>NZ_CP048103.1|WP_159439660.1|2263545_2264502_-|polysaccharide-deacetylase-family-protein
MKGTLLRTGLFLFMAVWVGFSTAWNASYAGQAGKRLQPAPEEKSTETVKAPARSESRKAEGQTEEREPQKQAQKEEPKEKPEQQQSVQKQPDEKQVAQGTKSAREKTEKKADLPVVVYQGPNEKKRVALTFDDGPDRTYTPQVLNILKGEQVPATFFVVGKEVNRNGDVAKRIVSEGHVIANHTWSHLYLPNLPDKRVEGELDRAVQAVKKATGKEMSLMRPPYGAVKGKEERITHIGHRIINWDVDTNDWKPGRTSQQILAAVKGHTVPGSIVLMHSGGGNRSATVQALPEIIRYLKQQGYEFVTVDQLLDVPAYIN

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Crispr_ID: NZ_CP048103_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_9

2249583-2250077

Orphan

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTACGTTATAAAC	CRISPRCasFinder
GTTTCAATTCCTTATAGGTACGTT	CRT
AGTTTCAATTCCTTATAGGTACGTTATAAAC	PILER-CR

7 spacers

The CRISPR arrays of NZ_CP048103_9

>merge|NZ_CP048103|9|2249583-2250077|CRISPRCasFinder,CRT,PILER-CR
CGTTCAATTCCTCATAGGTACGTTCAAAACCGTGGTGGTCATGTTTGAGCCGAGCAAATACTGCTTGTTTCAATTCCTCATAGGTACGTTCTAAACGGCCTCCGCCCAAATCTGATACACTTCATCGCCGGTGTTTCAATCCCTTATAGGTACGTACTAAACAGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCAGTTTCAATTCCTTATAGGTACGTTATAAACTTTCAATCGGGTTGGAAATGGGATGGGGTGAACCAGAGTTTCAATTCCTTATAGGTACGTTATAAACTAGATGGTACTCTTCATCTAGTCCGGGGAGGTCGAGTTTCAATTCCTTATAGGTACGTTATAAACATCTTGTGGGATATGAAGAGATTCCGATGGATGGACGTTTCAATTCCTTATAGGTACGTTATAAACGCTGGAAACTACCACCGGAGGGGAGAAGTACCTGGCTGGTTTCAATTCCTTATAGGTACGTTATAAACC

>NZ_CP048103|9|9|2249583-2250077|CRISPRCasFinder
CGTTCAATTCCTCATAGGTACGTTCAAAAC	CGTGGTGGTCATGTTTGAGCCGAGCAAATACTGCTT
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GGCCTCCGCCCAAATCTGATACACTTCATCGCCGGT
GTTTCAATCCCTTATAGGTACGTACTAAAC	AGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCA
GTTTCAATTCCTTATAGGTACGTTATAAAC	TTTCAATCGGGTTGGAAATGGGATGGGGTGAACCAGA
GTTTCAATTCCTTATAGGTACGTTATAAAC	TAGATGGTACTCTTCATCTAGTCCGGGGAGGTCGA
GTTTCAATTCCTTATAGGTACGTTATAAAC	ATCTTGTGGGATATGAAGAGATTCCGATGGATGGAC
GTTTCAATTCCTTATAGGTACGTTATAAAC	GCTGGAAACTACCACCGGAGGGGAGAAGTACCTGGCTG
GTTTCAATTCCTTATAGGTACGTTATAAACC

>NZ_CP048103|9|2|2249583-2250070|CRT
CGTTCAATTCCTCATAGGTACGTT	CAAAACCGTGGTGGTCATGTTTGAGCCGAGCAAATACTGCTT
GTTTCAATTCCTCATAGGTACGTT	CTAAACGGCCTCCGCCCAAATCTGATACACTTCATCGCCGGT
GTTTCAATCCCTTATAGGTACGTA	CTAAACAGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCA
GTTTCAATTCCTTATAGGTACGTT	ATAAACTTTCAATCGGGTTGGAAATGGGATGGGGTGAACCAGA
GTTTCAATTCCTTATAGGTACGTT	ATAAACTAGATGGTACTCTTCATCTAGTCCGGGGAGGTCGA
GTTTCAATTCCTTATAGGTACGTT	ATAAACATCTTGTGGGATATGAAGAGATTCCGATGGATGGAC
GTTTCAATTCCTTATAGGTACGTT	ATAAACGCTGGAAACTACCACCGGAGGGGAGAAGTACCTGGCTG
GTTTCAATTCCTTATAGGTACGTT

>NZ_CP048103|9|2|2249780-2250008|PILER-CR
AGTTTCAATTCCTTATAGGTACGTTATAAAC	TTTCAATCGGGTTGGAAATGGGATGGGGTGAACCAG
AGTTTCAATTCCTTATAGGTACGTTATAAAC	TAGATGGTACTCTTCATCTAGTCCGGGGAGGTCG
AGTTTCAATTCCTTATAGGTACGTTATAAAC	ATCTTGTGGGATATGAAGAGATTCCGATGGATGGA
CGTTTCAATTCCTTATAGGTACGTTATAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	unknown	unknown	gnl\|CDD\|235407
NZ_CP048103.1\|WP_084189799.1\|2248324_2248792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_143457014.1\|2261885_2262113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523303.1\|2243699_2243975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523301.1\|2243397_2243598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	unknown	unknown	gnl\|CDD\|319781
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP048103.1\|WP_009709037.1\|2248782_2248926_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.61771e-31
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	gnl\|CDD\|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.25055e-50
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.63087e-38
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	9.3246e-76
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.57027e-141
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.3896e-88
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	0.000147576
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43981e-87
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.65032e-76
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.4644e-119

>NZ_CP048103.1|WP_009709037.1|2248782_2248926_+|hypothetical-protein
MALTDLPAIKPSKGVNFLFTAFLVVFIFFFTQPKSTDVSPGSNGNLV
>NZ_CP048103.1|WP_084189799.1|2248324_2248792_+|hypothetical-protein
MRKKRMNLRARKTVHSLYQDMNLITAALLLTGQLTIGGLFVNPAGGFAIPLTGPITGGTRTEGKSGSRAATLMIDVIDIIIVILLLIDQISVRSTFVTSGGTFAVVVSGPIFGLPKIEADLPTRKRFFAHFGEHLTPPDHPSVPKRRKRRGHAWL
>NZ_CP048103.1|WP_040387239.1|2247639_2248119_+|CarD-family-transcriptional-regulator
MFQVGDKIVYPLHGAGVIDAVEEKEILGKKQRYYIIHMSLGNVQIMIPADRIDDMGLRHIVDPDTMENVFLLFNDDPSASSGSWNQRFRMNMDKMKTGDIFKTTEVIRDLAQINKEKSLGTGEKKLLDNAKQILISELVLVKEIEEEQAIQLLDEAAHC
>NZ_CP048103.1|WP_040387238.1|2247136_2247337_-|cold-shock-protein
MIEGTVKWFNADKGFGFIEVEGRDDVFVHFSAIQSEGFKSLDEGDKVSFEIVQGNRGDQAANVVKL
>NZ_CP048103.1|WP_084189798.1|2245718_2246435_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MTQTIAIISAMPEEVEPLRQQLGIGEPEQVGGLELSMTEWNGLQVITAVSGIGKAQAGACMQYLITRHHPTEVVNIGAAGALSDRLRIGDLVLVEESIYHDVDCTGVGQPPHTFPGVPRVIPSDPALVRTLSHVAANLGIPCHSGRVATGDAFVSDKEQRLSIRRETEAVLVEMETAAFAQIAHLNGVPFVSVRSVSDNADGGAEVSFQTFLTEVSKRNATLLEAYLRAKAEQESSRH
>NZ_CP048103.1|WP_076523305.1|2244112_2245468_-|glucose-6-phosphate-isomerase
MGKGLRFDYSSALAFFGPHELEQMAPAVQMAHDQLHGRSGAGREVLGWIDLPETYDREEFKRIRIAADKIRSDSDALVVIGIGGSYLGARAALEMLTHTYYNEQPPGERRGPEIHFAGNHLSSTGLVHLLQHLKGKRVSLNVISKSGTTTEPAIAFRILKEWMEQQYGREGARKRIYATTDRKRGALKQLAETEGYETFVIPDDVGGRYSVLTAVGLLPIAAAGIDLDQMMAGAREAGVAFGAPDLMENDAYQYAAIRNILYRKGKHVELLVHYEPALQYFSEWWKQLFGESEGKDGKGIFPASVQFTTDLHSMGQYIQEGHRNLFETVIQVEQPSESLTIGKDPDNLDGLNYLAGRTMDEVNRKALEATMLAHTDGGVPNLRLRIPEISPFNFGEMVYFFEKACGISGYLMGVNPFDQPGVEAYKRNMFALLGKPGFEGEGEKLNRRLNP
>NZ_CP048103.1|WP_076523303.1|2243699_2243975_+|hypothetical-protein
MKKTEKVKETKKVKETKKAKTSTDGKSKKGAKQTTPKGKQTKKSPPKKKVNIKKEARRKKKQAELGVELLYVFCGFILAGAILFISSLVRG
>NZ_CP048103.1|WP_076523301.1|2243397_2243598_-|hypothetical-protein
MVENKLHHLKFNIISSSGRVNLGDTVNVRSQVKFYLVGRGFVIGDCTGTSYGMRNQQVDPDSADQS
>NZ_CP048103.1|WP_076523299.1|2242162_2243146_-|galactose-1-phosphate-uridylyltransferase
MELRYNPLLDDWTMVASNRKDRPTLPRTDCPFCPGSGKVPDSYEVLKYDNDFPALMPDPPAPDPVGSAFYRTEKAHGKCEVILYSPEHQVTLPELPVPHIEKLVDLWTERFAELEKDPRHQYVLIFENRGEEVGVTMPHPHGQIYAYSRMPLKIQRELSSCKAHHERTGRCLICEMNREEVKFQGRVIAENDHFLAYLPFFTDYPYGLFIVSKQHLTALTDFSRSQKRSLAGILKEMTGAMDSLFNRPFPYMMVLHQRPVNGEDVEKYYHFHIEFYTPLRERDKIKYYASSEMGAWAACNPSSVEETAAELREAHRRFLEQEGGGLR
>NZ_CP048103.1|WP_009709026.1|2240975_2242166_-|galactokinase
MRGGEAAREAFKGVYGPGEVRLFFAPGRVNLIGEHTDYTGGYVFPAALTLGTWAALRPRKDGVFRLASTRFAERAEFRADEVRERREEGWTNFPKGMIRELADSGAGLPGADILYHGDLPPGAGLSSSASIGLVTGVALAALEDRRWRMLDLIQMVRRSENRYIGVQCGIMDPFASGMGKAGHAILLHCRRLDYRHVPLKLGDYRLMIIHTNKVRELAESRYNQRRRECEEGFRQLRQRLPEATDLGSVGEEAWLEAREAVESPLLRRRLAHVVTENARVLRSEQALVAGDLHRFGELMKESHRSLRENYEVTGRELDTLFEAAIQVPGCIGARMTGAGFGGCTVNLVHREALETFRRRVGEQYIAETGREPVFHETAIGDGAREIGEEEQAWQCW
>NZ_CP048103.1|WP_076523497.1|2252464_2253703_-|threonine-ammonia-lyase-IlvA
MSVEEIIVANHILKDVIIHTPLQRDPVLSAKYDCDLYLKREDLQVVRSFKIRGAYNVIRHLDPQKLERGVVCASAGNHAQGVAFSCQSLQIPGRIFMPSTTPKQKVSQVKRFGGSFVEVVLTGDTFDDSLAEALRYGEEKGMEFIHPFENPLTIAGQGTVGLEILNDLQEPVDYLFVGIGGGGLAAGVASYVKSLSPDTRVIGVEPAGAPSMKSSVEAGRVIELNEIEKFVDGAAVRQVGELTHAICRETVDEFTLVPEGKVCTTILNLYNENAIVAEPAGALSIAALDGFREQIRGKTVVCVVSGGNNDIDRMQEIKERSLIHEGLKHYFSVNFPQRAGALREFLDEVLGPDDDITRFEYTKKNSKENGPALVGIELKRKEDYAPLIDRMNRKGFHYIEINKDPHLFNLLI
>NZ_CP048103.1|WP_009709041.1|2253923_2254832_-|LysR-family-transcriptional-regulator
MDSHLRVFVTVAEKKNFSRTAEELHMTQPAVSQYIQALERTVGAKLIERNNKFVCLTKAGDIVYHHAKEIMGLYTHMQSLVDDLMQVASGNLSIGASYTFGEYILPHVIARLHGRYPLIQPTVTIGNTTEIAESVADRRLDVGIVEGEFNHERLNTESFAKDWMVIIVPADHPLTRQKEVTVPDLKKENWIVREKGSGTREATEKMFKKLGFTPDHLMEFGSTQLIKESVEAGLGISFLSNWAVRKEESLGTIHLLKMDGTPIPRKFTWITQDTPFQTKALEVFIDEMRRLETLFSTDDPRQ
>NZ_CP048103.1|WP_009709042.1|2254954_2256001_+|putative-sulfate-exporter-family-transporter
MSEQALENVQHQDMETKPSGTNRRKGWIGGIIFTFVIAVLGYGLSHLPGFDRIGPLASAIVIAVAFRQFSGYPESIRPGIQFSSKKLLRFAIILYGLRLNIEVVLHDGLPLLVRGAGTILFAIGLTLLLARWLKANTAISLLLGVGTGVCGAAAIAAVSPILKNKDEDTAISVGIIALVGTCFAIGYTLIKPFVPLDSIQYGIWSGISLHEIAHVALAAAPAGQDALAIALLAKLGRVFLLVPLCFIFMYWMKRKNNGEADAHIEFPWFLVGFILMSFVGTYLLGKAIPVSESVMDGLSQTATLILTMAMVGLGLNVNLRDLRSKALRPLIAMVITSVLLSVVTFFVS
>NZ_CP048103.1|WP_040387961.1|2256099_2256939_-|diaminopimelate-epimerase
MRFTKMHGLGNDFIVVTADTWPQEAPELARRLCDRRFGVGADGLVFLLPSRAGDVRMRILNADGSEAEQCGNAVRCVAKYYYERISGAKKEIIVETGAGLQSVRLETDGSQVESICVDMGRPILEADRVPVALEGERVVAHPVKIGEESFRFTAVSMGNPHAVIFVDDAAAFPVETWGPRLETHPLFPNKTNVEFVTVHSPRELEMRVWERGVGPTLACGTGACASLVAAVLNGTADRRARVRLKGGDLEIEWREGDDRVYMTGPARTVFEGEWNEGSG
>NZ_CP048103.1|WP_172998917.1|2257092_2259870_-|calcium-translocating-P-type-ATPase,-SERCA-type
MVSMRCFWDKGGGNVSEGSRYLDWDMEKLTAHFDVDPAEGLEDTEAEKRKEKVGPNQLAEGKRLSPLALLLNQFKDFMVLVLLAATLISGLLGEYTDAIAIIAIVLLNAVLGFIQEFRAEKSLTALKELSAPMARVKRNGSWKRIPAAELVPGDIVSLESGDRIPADLRLIHAENLYIEESALTGESVPVSKTGSVIRGGEEVPLGDRKNMAFLGTMAVRGTGIGLVVFTGMKTEMGKIAHLIQTTESMQTPLQNRLEQLGKVLIVVSLFLTAVVVLTGIIHGHDAYKMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIRRRAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTHLWVDGRRLEVSGSGYEPEGEFTFDGRKVNPGRDPGLKRLLEVAVLCNNARLIRESNREGMLRRKQESWRIDGDPTEGALMVVGAKGGHTGESLEKEWKRVREFPFDSERKMMSVLVEKGKGERILMTKGAPDVLLNRCTHLLQGGRPVPLTEAMREKILSHNDQLAAMALRNLAFACREWKGAEPGRESEAERELVFVGLAGMIDPPREEVKKAIRTCRRAGIRTVMITGDHQTTAVAIARQLGILTEGGLTVNGNELQRMSDREFEQKAKHIQVYARVSPEHKLKIVKALQKDGDVVAMTGDGVNDAPAIKAADIGIAMGITGTDVSKEASSLILSDDNFATIVSAIEEGRSIYDNIRKFISYLLASNVGEILVMFLAMLAGMPLPLVPIQILWVNLVTDGLPAMALGVDPGEEDTMDRPPRNSRESIFARGVGWKIVSRGLLIGTFTLASFWVAYHETPDDLLRAQTIAFATLVLAQLVYVFDCRSSQSVFHRNPLNNLPLVLAVVSSALLLLVVMYYPPLQPVFHTVALGFREWALVVAASTLPTLLAGLIDLVRPIRRPAHS
>NZ_CP048103.1|WP_009709046.1|2260080_2261787_+|fibronectin/fibrinogen-binding-protein
MSIDGIAIRAVVHELEELLIGGRVTKIYQPGEADLILHIRNRGRNRRLLLSAHPAYPRLHLTEQATENPLTPPMFCMLLRKHCEGGVIEGIRQVGMERIIHMDLRCRDELGDEVIRRLVVEVMGRHSNIILIDPASGKILDGIRRVTPDISRHRQVLPGLLYQAPPEQDKKDPLVAEREDFLRSLHFNEGKLDRQIVARFAGIGPQTAREILHRGGLGDREQLWSAFHTLMNEIRDHLYQPQIVYDRKPAFSVIPLTHLRGERETFDSVGRCLEAFYHGKAERDRARQQNHDLIRNLKNILDKNETKIEKLTQEWTDTEKAETHRIYGELLTSFMHQVKRGDQVLKAVNYYDPESPEVTIPLDPRLTPSENAQRYFRLYNKAKSARKWNREQIEKTRRENEYLESVLVQLQNAGPREAEEIKEELQEEGWLKAKPQKKRKKQTRKPEPDTYFSSEGIPILVGRNNKQNDFLTHRIAAPTDTWLHTKEIPGSHVVIRGKSFGEATLHEAAMLAAWHSKARESSQVPVDHTLIKHVKKPSGTPPGFVIYEEQKTLYVTPEESEIRKLKRE
>NZ_CP048103.1|WP_143457014.1|2261885_2262113_-|hypothetical-protein
MKKNQRKYRPVPARRRTSVPVVKTAAGTRIPVQTQVALGKGKPNPKTEEVLFFCPPFFFPPPFAFFGPFGAGFFI
>NZ_CP048103.1|WP_076523499.1|2262444_2262822_+|multidrug-efflux-SMR-transporter
MHWVYLIFAILFEVAGTMSMKLSHGFTKLWPSLGMVVFYILAFAGLTLSLKQMPVSIAYAVWSGLGTAVIAVLGYLIFQESMTWLKAGSILLIVLGVIGLNLGEGSDASDSPEPDRHPVETVDAE
>NZ_CP048103.1|WP_084189800.1|2262844_2263021_-|pentapeptide-repeat-containing-protein
MRRADLSYATLDGACLKGADLREAIMEGIPWKELNLEGTRIDMAQAVALAQSLGARVE
>NZ_CP048103.1|WP_159439660.1|2263545_2264502_-|polysaccharide-deacetylase-family-protein
MKGTLLRTGLFLFMAVWVGFSTAWNASYAGQAGKRLQPAPEEKSTETVKAPARSESRKAEGQTEEREPQKQAQKEEPKEKPEQQQSVQKQPDEKQVAQGTKSAREKTEKKADLPVVVYQGPNEKKRVALTFDDGPDRTYTPQVLNILKGEQVPATFFVVGKEVNRNGDVAKRIVSEGHVIANHTWSHLYLPNLPDKRVEGELDRAVQAVKKATGKEMSLMRPPYGAVKGKEERITHIGHRIINWDVDTNDWKPGRTSQQILAAVKGHTVPGSIVLMHSGGGNRSATVQALPEIIRYLKQQGYEFVTVDQLLDVPAYIN

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Crispr_ID: NZ_CP048103_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_11

2250788-2251304

Orphan

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTACGTTATAAAC	CRISPRCasFinder
GTTTCAATTCCTNATAGGTACGTT	CRT

7 spacers

The CRISPR arrays of NZ_CP048103_11

>merge|NZ_CP048103|11|2250788-2251304|CRISPRCasFinder,CRT
CGTTCAATTCCTCATAGGTACGTTCAAAACCAGCGGTCCATGTTTGATCACATTTCCAACTATGTCTAGTTTCAATCCTCATAGGTACGTTCTAAACCTTTCTGGGAGGAGCCTGGGCTAATCATCACAAAGAGGTTTCAATTCCTTATAGGTACGTTCTAAACGGCCTCCGCCCAAATCTGATACACTTCATCGCCGGTGTTTCAATCCCTTATAGGTACGTACTAAACAGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCAGTTTCAATTCCTTATAGGTACGTTATAAACGAAATACGTCGAGGTTCAGAGGACGATCACCAGCGAGTTTCAATTCCTTATAGGTACGTTATAAACATGAAGTACGCCGAAGGCTCGAAGACTGGGATGGACAAATGTTTCAATTCCTCATAGGTACACTCTAAACTTGGATGGTCTTGGCGTTCACCCACCGGACCATGGCGTTGCTCGGCGTATTGTAGTTTCAATTCCTCATAGGTACGCTCTAAACC

>NZ_CP048103|11|11|2250788-2251304|CRISPRCasFinder
CGTTCAATTCCTCATAGGTACGTTCAAAAC	CAGCGGTCCATGTTTGATCACATTTCCAACTATGTCT
AGTTTCAATCCTCATAGGTACGTTCTAAAC	CTTTCTGGGAGGAGCCTGGGCTAATCATCACAAAGAG
GTTTCAATTCCTTATAGGTACGTTCTAAAC	GGCCTCCGCCCAAATCTGATACACTTCATCGCCGGT
GTTTCAATCCCTTATAGGTACGTACTAAAC	AGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCA
GTTTCAATTCCTTATAGGTACGTTATAAAC	GAAATACGTCGAGGTTCAGAGGACGATCACCAGCGA
GTTTCAATTCCTTATAGGTACGTTATAAAC	ATGAAGTACGCCGAAGGCTCGAAGACTGGGATGGACAAAT
GTTTCAATTCCTCATAGGTACACTCTAAAC	TTGGATGGTCTTGGCGTTCACCCACCGGACCATGGCGTTGCTCGGCGTATTGTA
GTTTCAATTCCTCATAGGTACGCTCTAAACC

>NZ_CP048103|11|3|2250788-2251297|CRT
CGTTCAATTCCTCATAGGTACGTT	CAAAACCAGCGGTCCATGTTTGATCACATTTCCAACTATGTCT
AGTTTCAATCCTCATAGGTACGTT	CTAAACCTTTCTGGGAGGAGCCTGGGCTAATCATCACAAAGAG
GTTTCAATTCCTTATAGGTACGTT	CTAAACGGCCTCCGCCCAAATCTGATACACTTCATCGCCGGT
GTTTCAATCCCTTATAGGTACGTA	CTAAACAGCCAGCATCCTTTTCGTATCTGTGGGGCATTCGCA
GTTTCAATTCCTTATAGGTACGTT	ATAAACGAAATACGTCGAGGTTCAGAGGACGATCACCAGCGA
GTTTCAATTCCTTATAGGTACGTT	ATAAACATGAAGTACGCCGAAGGCTCGAAGACTGGGATGGACAAAT
GTTTCAATTCCTCATAGGTACACT	CTAAACTTGGATGGTCTTGGCGTTCACCCACCGGACCATGGCGTTGCTCGGCGTATTGTA
GTTTCAATTCCTCATAGGTACGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	unknown	unknown	gnl\|CDD\|235407
NZ_CP048103.1\|WP_084189799.1\|2248324_2248792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_143457014.1\|2261885_2262113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523303.1\|2243699_2243975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523301.1\|2243397_2243598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	unknown	unknown	gnl\|CDD\|319781
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP048103.1\|WP_009709037.1\|2248782_2248926_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.61771e-31
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	gnl\|CDD\|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.25055e-50
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.63087e-38
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	9.3246e-76
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.57027e-141
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.3896e-88
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	0.000147576
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43981e-87
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.65032e-76
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.4644e-119

>NZ_CP048103.1|WP_009709037.1|2248782_2248926_+|hypothetical-protein
MALTDLPAIKPSKGVNFLFTAFLVVFIFFFTQPKSTDVSPGSNGNLV
>NZ_CP048103.1|WP_084189799.1|2248324_2248792_+|hypothetical-protein
MRKKRMNLRARKTVHSLYQDMNLITAALLLTGQLTIGGLFVNPAGGFAIPLTGPITGGTRTEGKSGSRAATLMIDVIDIIIVILLLIDQISVRSTFVTSGGTFAVVVSGPIFGLPKIEADLPTRKRFFAHFGEHLTPPDHPSVPKRRKRRGHAWL
>NZ_CP048103.1|WP_040387239.1|2247639_2248119_+|CarD-family-transcriptional-regulator
MFQVGDKIVYPLHGAGVIDAVEEKEILGKKQRYYIIHMSLGNVQIMIPADRIDDMGLRHIVDPDTMENVFLLFNDDPSASSGSWNQRFRMNMDKMKTGDIFKTTEVIRDLAQINKEKSLGTGEKKLLDNAKQILISELVLVKEIEEEQAIQLLDEAAHC
>NZ_CP048103.1|WP_040387238.1|2247136_2247337_-|cold-shock-protein
MIEGTVKWFNADKGFGFIEVEGRDDVFVHFSAIQSEGFKSLDEGDKVSFEIVQGNRGDQAANVVKL
>NZ_CP048103.1|WP_084189798.1|2245718_2246435_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MTQTIAIISAMPEEVEPLRQQLGIGEPEQVGGLELSMTEWNGLQVITAVSGIGKAQAGACMQYLITRHHPTEVVNIGAAGALSDRLRIGDLVLVEESIYHDVDCTGVGQPPHTFPGVPRVIPSDPALVRTLSHVAANLGIPCHSGRVATGDAFVSDKEQRLSIRRETEAVLVEMETAAFAQIAHLNGVPFVSVRSVSDNADGGAEVSFQTFLTEVSKRNATLLEAYLRAKAEQESSRH
>NZ_CP048103.1|WP_076523305.1|2244112_2245468_-|glucose-6-phosphate-isomerase
MGKGLRFDYSSALAFFGPHELEQMAPAVQMAHDQLHGRSGAGREVLGWIDLPETYDREEFKRIRIAADKIRSDSDALVVIGIGGSYLGARAALEMLTHTYYNEQPPGERRGPEIHFAGNHLSSTGLVHLLQHLKGKRVSLNVISKSGTTTEPAIAFRILKEWMEQQYGREGARKRIYATTDRKRGALKQLAETEGYETFVIPDDVGGRYSVLTAVGLLPIAAAGIDLDQMMAGAREAGVAFGAPDLMENDAYQYAAIRNILYRKGKHVELLVHYEPALQYFSEWWKQLFGESEGKDGKGIFPASVQFTTDLHSMGQYIQEGHRNLFETVIQVEQPSESLTIGKDPDNLDGLNYLAGRTMDEVNRKALEATMLAHTDGGVPNLRLRIPEISPFNFGEMVYFFEKACGISGYLMGVNPFDQPGVEAYKRNMFALLGKPGFEGEGEKLNRRLNP
>NZ_CP048103.1|WP_076523303.1|2243699_2243975_+|hypothetical-protein
MKKTEKVKETKKVKETKKAKTSTDGKSKKGAKQTTPKGKQTKKSPPKKKVNIKKEARRKKKQAELGVELLYVFCGFILAGAILFISSLVRG
>NZ_CP048103.1|WP_076523301.1|2243397_2243598_-|hypothetical-protein
MVENKLHHLKFNIISSSGRVNLGDTVNVRSQVKFYLVGRGFVIGDCTGTSYGMRNQQVDPDSADQS
>NZ_CP048103.1|WP_076523299.1|2242162_2243146_-|galactose-1-phosphate-uridylyltransferase
MELRYNPLLDDWTMVASNRKDRPTLPRTDCPFCPGSGKVPDSYEVLKYDNDFPALMPDPPAPDPVGSAFYRTEKAHGKCEVILYSPEHQVTLPELPVPHIEKLVDLWTERFAELEKDPRHQYVLIFENRGEEVGVTMPHPHGQIYAYSRMPLKIQRELSSCKAHHERTGRCLICEMNREEVKFQGRVIAENDHFLAYLPFFTDYPYGLFIVSKQHLTALTDFSRSQKRSLAGILKEMTGAMDSLFNRPFPYMMVLHQRPVNGEDVEKYYHFHIEFYTPLRERDKIKYYASSEMGAWAACNPSSVEETAAELREAHRRFLEQEGGGLR
>NZ_CP048103.1|WP_009709026.1|2240975_2242166_-|galactokinase
MRGGEAAREAFKGVYGPGEVRLFFAPGRVNLIGEHTDYTGGYVFPAALTLGTWAALRPRKDGVFRLASTRFAERAEFRADEVRERREEGWTNFPKGMIRELADSGAGLPGADILYHGDLPPGAGLSSSASIGLVTGVALAALEDRRWRMLDLIQMVRRSENRYIGVQCGIMDPFASGMGKAGHAILLHCRRLDYRHVPLKLGDYRLMIIHTNKVRELAESRYNQRRRECEEGFRQLRQRLPEATDLGSVGEEAWLEAREAVESPLLRRRLAHVVTENARVLRSEQALVAGDLHRFGELMKESHRSLRENYEVTGRELDTLFEAAIQVPGCIGARMTGAGFGGCTVNLVHREALETFRRRVGEQYIAETGREPVFHETAIGDGAREIGEEEQAWQCW
>NZ_CP048103.1|WP_076523497.1|2252464_2253703_-|threonine-ammonia-lyase-IlvA
MSVEEIIVANHILKDVIIHTPLQRDPVLSAKYDCDLYLKREDLQVVRSFKIRGAYNVIRHLDPQKLERGVVCASAGNHAQGVAFSCQSLQIPGRIFMPSTTPKQKVSQVKRFGGSFVEVVLTGDTFDDSLAEALRYGEEKGMEFIHPFENPLTIAGQGTVGLEILNDLQEPVDYLFVGIGGGGLAAGVASYVKSLSPDTRVIGVEPAGAPSMKSSVEAGRVIELNEIEKFVDGAAVRQVGELTHAICRETVDEFTLVPEGKVCTTILNLYNENAIVAEPAGALSIAALDGFREQIRGKTVVCVVSGGNNDIDRMQEIKERSLIHEGLKHYFSVNFPQRAGALREFLDEVLGPDDDITRFEYTKKNSKENGPALVGIELKRKEDYAPLIDRMNRKGFHYIEINKDPHLFNLLI
>NZ_CP048103.1|WP_009709041.1|2253923_2254832_-|LysR-family-transcriptional-regulator
MDSHLRVFVTVAEKKNFSRTAEELHMTQPAVSQYIQALERTVGAKLIERNNKFVCLTKAGDIVYHHAKEIMGLYTHMQSLVDDLMQVASGNLSIGASYTFGEYILPHVIARLHGRYPLIQPTVTIGNTTEIAESVADRRLDVGIVEGEFNHERLNTESFAKDWMVIIVPADHPLTRQKEVTVPDLKKENWIVREKGSGTREATEKMFKKLGFTPDHLMEFGSTQLIKESVEAGLGISFLSNWAVRKEESLGTIHLLKMDGTPIPRKFTWITQDTPFQTKALEVFIDEMRRLETLFSTDDPRQ
>NZ_CP048103.1|WP_009709042.1|2254954_2256001_+|putative-sulfate-exporter-family-transporter
MSEQALENVQHQDMETKPSGTNRRKGWIGGIIFTFVIAVLGYGLSHLPGFDRIGPLASAIVIAVAFRQFSGYPESIRPGIQFSSKKLLRFAIILYGLRLNIEVVLHDGLPLLVRGAGTILFAIGLTLLLARWLKANTAISLLLGVGTGVCGAAAIAAVSPILKNKDEDTAISVGIIALVGTCFAIGYTLIKPFVPLDSIQYGIWSGISLHEIAHVALAAAPAGQDALAIALLAKLGRVFLLVPLCFIFMYWMKRKNNGEADAHIEFPWFLVGFILMSFVGTYLLGKAIPVSESVMDGLSQTATLILTMAMVGLGLNVNLRDLRSKALRPLIAMVITSVLLSVVTFFVS
>NZ_CP048103.1|WP_040387961.1|2256099_2256939_-|diaminopimelate-epimerase
MRFTKMHGLGNDFIVVTADTWPQEAPELARRLCDRRFGVGADGLVFLLPSRAGDVRMRILNADGSEAEQCGNAVRCVAKYYYERISGAKKEIIVETGAGLQSVRLETDGSQVESICVDMGRPILEADRVPVALEGERVVAHPVKIGEESFRFTAVSMGNPHAVIFVDDAAAFPVETWGPRLETHPLFPNKTNVEFVTVHSPRELEMRVWERGVGPTLACGTGACASLVAAVLNGTADRRARVRLKGGDLEIEWREGDDRVYMTGPARTVFEGEWNEGSG
>NZ_CP048103.1|WP_172998917.1|2257092_2259870_-|calcium-translocating-P-type-ATPase,-SERCA-type
MVSMRCFWDKGGGNVSEGSRYLDWDMEKLTAHFDVDPAEGLEDTEAEKRKEKVGPNQLAEGKRLSPLALLLNQFKDFMVLVLLAATLISGLLGEYTDAIAIIAIVLLNAVLGFIQEFRAEKSLTALKELSAPMARVKRNGSWKRIPAAELVPGDIVSLESGDRIPADLRLIHAENLYIEESALTGESVPVSKTGSVIRGGEEVPLGDRKNMAFLGTMAVRGTGIGLVVFTGMKTEMGKIAHLIQTTESMQTPLQNRLEQLGKVLIVVSLFLTAVVVLTGIIHGHDAYKMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIRRRAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTHLWVDGRRLEVSGSGYEPEGEFTFDGRKVNPGRDPGLKRLLEVAVLCNNARLIRESNREGMLRRKQESWRIDGDPTEGALMVVGAKGGHTGESLEKEWKRVREFPFDSERKMMSVLVEKGKGERILMTKGAPDVLLNRCTHLLQGGRPVPLTEAMREKILSHNDQLAAMALRNLAFACREWKGAEPGRESEAERELVFVGLAGMIDPPREEVKKAIRTCRRAGIRTVMITGDHQTTAVAIARQLGILTEGGLTVNGNELQRMSDREFEQKAKHIQVYARVSPEHKLKIVKALQKDGDVVAMTGDGVNDAPAIKAADIGIAMGITGTDVSKEASSLILSDDNFATIVSAIEEGRSIYDNIRKFISYLLASNVGEILVMFLAMLAGMPLPLVPIQILWVNLVTDGLPAMALGVDPGEEDTMDRPPRNSRESIFARGVGWKIVSRGLLIGTFTLASFWVAYHETPDDLLRAQTIAFATLVLAQLVYVFDCRSSQSVFHRNPLNNLPLVLAVVSSALLLLVVMYYPPLQPVFHTVALGFREWALVVAASTLPTLLAGLIDLVRPIRRPAHS
>NZ_CP048103.1|WP_009709046.1|2260080_2261787_+|fibronectin/fibrinogen-binding-protein
MSIDGIAIRAVVHELEELLIGGRVTKIYQPGEADLILHIRNRGRNRRLLLSAHPAYPRLHLTEQATENPLTPPMFCMLLRKHCEGGVIEGIRQVGMERIIHMDLRCRDELGDEVIRRLVVEVMGRHSNIILIDPASGKILDGIRRVTPDISRHRQVLPGLLYQAPPEQDKKDPLVAEREDFLRSLHFNEGKLDRQIVARFAGIGPQTAREILHRGGLGDREQLWSAFHTLMNEIRDHLYQPQIVYDRKPAFSVIPLTHLRGERETFDSVGRCLEAFYHGKAERDRARQQNHDLIRNLKNILDKNETKIEKLTQEWTDTEKAETHRIYGELLTSFMHQVKRGDQVLKAVNYYDPESPEVTIPLDPRLTPSENAQRYFRLYNKAKSARKWNREQIEKTRRENEYLESVLVQLQNAGPREAEEIKEELQEEGWLKAKPQKKRKKQTRKPEPDTYFSSEGIPILVGRNNKQNDFLTHRIAAPTDTWLHTKEIPGSHVVIRGKSFGEATLHEAAMLAAWHSKARESSQVPVDHTLIKHVKKPSGTPPGFVIYEEQKTLYVTPEESEIRKLKRE
>NZ_CP048103.1|WP_143457014.1|2261885_2262113_-|hypothetical-protein
MKKNQRKYRPVPARRRTSVPVVKTAAGTRIPVQTQVALGKGKPNPKTEEVLFFCPPFFFPPPFAFFGPFGAGFFI
>NZ_CP048103.1|WP_076523499.1|2262444_2262822_+|multidrug-efflux-SMR-transporter
MHWVYLIFAILFEVAGTMSMKLSHGFTKLWPSLGMVVFYILAFAGLTLSLKQMPVSIAYAVWSGLGTAVIAVLGYLIFQESMTWLKAGSILLIVLGVIGLNLGEGSDASDSPEPDRHPVETVDAE
>NZ_CP048103.1|WP_084189800.1|2262844_2263021_-|pentapeptide-repeat-containing-protein
MRRADLSYATLDGACLKGADLREAIMEGIPWKELNLEGTRIDMAQAVALAQSLGARVE
>NZ_CP048103.1|WP_159439660.1|2263545_2264502_-|polysaccharide-deacetylase-family-protein
MKGTLLRTGLFLFMAVWVGFSTAWNASYAGQAGKRLQPAPEEKSTETVKAPARSESRKAEGQTEEREPQKQAQKEEPKEKPEQQQSVQKQPDEKQVAQGTKSAREKTEKKADLPVVVYQGPNEKKRVALTFDDGPDRTYTPQVLNILKGEQVPATFFVVGKEVNRNGDVAKRIVSEGHVIANHTWSHLYLPNLPDKRVEGELDRAVQAVKKATGKEMSLMRPPYGAVKGKEERITHIGHRIINWDVDTNDWKPGRTSQQILAAVKGHTVPGSIVLMHSGGGNRSATVQALPEIIRYLKQQGYEFVTVDQLLDVPAYIN

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Crispr_ID: NZ_CP048103_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_12

2251562-2252262

Orphan

Consensus_repeat	Method
GTTTCAATTCCTTATAGGTACGTTATAAAC	CRISPRCasFinder
GTTTCAATTCCTNATAGGTACGTTCTAAAC	CRT
GTTTCAATTCCTTATAGGTACGTTCTAAAC	PILER-CR

10 spacers

The CRISPR arrays of NZ_CP048103_12

>merge|NZ_CP048103|12|2251562-2252262|CRISPRCasFinder,CRT,PILER-CR
CGTTCAATTCCTTATAAGTAAGCCCTAAACGCAGACGCGGCGGTCGGGATTGTGACTCAGCATGTAGTGTTTCAATTCCTTATAGGTACGTTATAAACCTGGGAAAGGTCTGTTGGAGGCATTGGCAAAGGGGAGTTTCAATTCCTTATAGGTACGTTCTAAACTTGTAAGGGGGTTTTCCGTTTGGAAGAAGGTTGGATGTTTCAATTCCTTATAGGTACGTTCTAAACCGATTTTGTTTTTCGGGAAGTTCTTGTCAACAACGATAGTTTCAATTCCTTATAGGTACGTTCTAAACCCGACCCAAGCCCACTGATCCCTCTGTTCCGTTTTGCGGTTTCAATTCCTTATAGGTACGTTCTAAACGGTGGTGTCTTTGACGTTGGCCCCGGTGTATTCGGGTTTCAATTCCTCATAGGTACGTTCTAAACGGCTTTAGAGTCTGTCACGATTTTCCTGGGTACGGTTGTTTCAATTCCTCATAGGTACGTTCTAAACCAGGATGTGTACCTGTGCGAGATTCAAGTGGATGGGAGTTTCAATTCCTCATAGGTACGTTCTAAACGGTTCAATTGCTCTTATAAGTCGTTCTTCTTTTAAGTTTCAATTCCTCATAGGTACGTTCTAAACGCTGCTCATCATCTCCGAGGGACTACTTGCCTTCCGAAATGGTTTCAATTCCTCATAGGTACGTTCTAAAC

>NZ_CP048103|12|12|2251562-2252262|CRISPRCasFinder
CGTTCAATTCCTTATAAGTAAGCCCTAAAC	GCAGACGCGGCGGTCGGGATTGTGACTCAGCATGTAGT
GTTTCAATTCCTTATAGGTACGTTATAAAC	CTGGGAAAGGTCTGTTGGAGGCATTGGCAAAGGGGA
GTTTCAATTCCTTATAGGTACGTTCTAAAC	TTGTAAGGGGGTTTTCCGTTTGGAAGAAGGTTGGAT
GTTTCAATTCCTTATAGGTACGTTCTAAAC	CGATTTTGTTTTTCGGGAAGTTCTTGTCAACAACGATA
GTTTCAATTCCTTATAGGTACGTTCTAAAC	CCGACCCAAGCCCACTGATCCCTCTGTTCCGTTTTGCG
GTTTCAATTCCTTATAGGTACGTTCTAAAC	GGTGGTGTCTTTGACGTTGGCCCCGGTGTATTCGG
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GGCTTTAGAGTCTGTCACGATTTTCCTGGGTACGGTT
GTTTCAATTCCTCATAGGTACGTTCTAAAC	CAGGATGTGTACCTGTGCGAGATTCAAGTGGATGGGA
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GGTTCAATTGCTCTTATAAGTCGTTCTTCTTTTAA
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GCTGCTCATCATCTCCGAGGGACTACTTGCCTTCCGAAATG
GTTTCAATTCCTCATAGGTACGTTCTAAAC

>NZ_CP048103|12|4|2251562-2252262|CRT
CGTTCAATTCCTTATAAGTAAGCCCTAAAC	GCAGACGCGGCGGTCGGGATTGTGACTCAGCATGTAGT
GTTTCAATTCCTTATAGGTACGTTATAAAC	CTGGGAAAGGTCTGTTGGAGGCATTGGCAAAGGGGA
GTTTCAATTCCTTATAGGTACGTTCTAAAC	TTGTAAGGGGGTTTTCCGTTTGGAAGAAGGTTGGAT
GTTTCAATTCCTTATAGGTACGTTCTAAAC	CGATTTTGTTTTTCGGGAAGTTCTTGTCAACAACGATA
GTTTCAATTCCTTATAGGTACGTTCTAAAC	CCGACCCAAGCCCACTGATCCCTCTGTTCCGTTTTGCG
GTTTCAATTCCTTATAGGTACGTTCTAAAC	GGTGGTGTCTTTGACGTTGGCCCCGGTGTATTCGG
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GGCTTTAGAGTCTGTCACGATTTTCCTGGGTACGGTT
GTTTCAATTCCTCATAGGTACGTTCTAAAC	CAGGATGTGTACCTGTGCGAGATTCAAGTGGATGGGA
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GGTTCAATTGCTCTTATAAGTCGTTCTTCTTTTAA
GTTTCAATTCCTCATAGGTACGTTCTAAAC	GCTGCTCATCATCTCCGAGGGACTACTTGCCTTCCGAAATG
GTTTCAATTCCTCATAGGTACGTTCTAAAC

>NZ_CP048103|12|3|2251564-2252262|PILER-CR
TTCAATTCCTTATAAGTAAGCCCTAAACGC	AGACGCGGCGGTCGGGATTGTGACTCAGCATGTAGTGT
TTCAATTCCTTATAGGTACGTTATAAACCT	GGGAAAGGTCTGTTGGAGGCATTGGCAAAGGGGAGT
TTCAATTCCTTATAGGTACGTTCTAAACTT	GTAAGGGGGTTTTCCGTTTGGAAGAAGGTTGGATGT
TTCAATTCCTTATAGGTACGTTCTAAACCG	ATTTTGTTTTTCGGGAAGTTCTTGTCAACAACGATAGT
TTCAATTCCTTATAGGTACGTTCTAAACCC	GACCCAAGCCCACTGATCCCTCTGTTCCGTTTTGCGGT
TTCAATTCCTTATAGGTACGTTCTAAACGG	TGGTGTCTTTGACGTTGGCCCCGGTGTATTCGGGT
TTCAATTCCTCATAGGTACGTTCTAAACGG	CTTTAGAGTCTGTCACGATTTTCCTGGGTACGGTTGT
TTCAATTCCTCATAGGTACGTTCTAAACCA	GGATGTGTACCTGTGCGAGATTCAAGTGGATGGGAGT
TTCAATTCCTCATAGGTACGTTCTAAACGG	TTCAATTGCTCTTATAAGTCGTTCTTCTTTTAAGT
TTCAATTCCTCATAGGTACGTTCTAAACGC	TGCTCATCATCTCCGAGGGACTACTTGCCTTCCGAAATGGT
TTCAATTCCTCATAGGTACGTTCTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224248
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	unknown	unknown	gnl\|CDD\|224987
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	unknown	unknown	gnl\|CDD\|336217
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|184504
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	unknown	unknown	gnl\|CDD\|235407
NZ_CP048103.1\|WP_084189799.1\|2248324_2248792_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_143457014.1\|2261885_2262113_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523303.1\|2243699_2243975_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523301.1\|2243397_2243598_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	unknown	unknown	gnl\|CDD\|319781
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl\|CDD\|225411
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	unknown	unknown	gnl\|CDD\|234768
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl\|CDD\|350159
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|366316
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176112
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|238341
NZ_CP048103.1\|WP_009709037.1\|2248782_2248926_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_040387238.1\|2247136_2247337_-\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.61771e-31
NZ_CP048103.1\|WP_009709046.1\|2260080_2261787_+\|fibronectin/fibrinogen-binding-protein	gnl\|CDD\|336217	pfam05833, FbpA, Fibronectin-binding protein A N-terminus (FbpA). This family consists of the N-terminal region of the prokaryotic fibronectin-binding protein. Fibronectin binding is considered to be an important virulence factor in streptococcal infections. Fibronectin is a dimeric glycoprotein that is present in a soluble form in plasma and extracellular fluids; it is also present in a fibrillar form on cell surfaces. Both the soluble and cellular forms of fibronectin may be incorporated into the extracellular tissue matrix. While fibronectin has critical roles in eukaryotic cellular processes, such as adhesion, migration and differentiation, it is also a substrate for the attachment of bacteria. The binding of pathogenic Streptococcus pyogenes and Staphylococcus aureus to epithelial cells via fibronectin facilitates their internalisation and systemic spread within the host.	0
NZ_CP048103.1\|WP_076523305.1\|2244112_2245468_-\|glucose-6-phosphate-isomerase	gnl\|CDD\|184504	PRK14097, pgi, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP048103.1\|WP_009709026.1\|2240975_2242166_-\|galactokinase	gnl\|CDD\|235407	PRK05322, PRK05322, galactokinase; Provisional.	0
NZ_CP048103.1\|WP_040387239.1\|2247639_2248119_+\|CarD-family-transcriptional-regulator	gnl\|CDD\|224248	COG1329, COG1329, Transcriptional regulators, similar to M. xanthus CarD [Transcription].	1.25055e-50
NZ_CP048103.1\|WP_076523499.1\|2262444_2262822_+\|multidrug-efflux-SMR-transporter	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	1.63087e-38
NZ_CP048103.1\|WP_076523497.1\|2252464_2253703_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_CP048103.1\|WP_172998917.1\|2257092_2259870_-\|calcium-translocating-P-type-ATPase,-SERCA-type	gnl\|CDD\|319781	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp. strain PCC 7942 PacL and Listeria monocytogenes LMCA1. Ca(2+) transport ATPase is a plasma membrane protein which pumps Ca(2+) ion out of the cytoplasm. This prokaryotic subfamily includes the Ca(2+)-ATPase Synechococcus elongatus PacL, Listeria monocytogenes Ca(2+)-ATPase 1 (LMCA1) which has a low Ca(2+) affinity and a high pH optimum (pH about 9) and may remove Ca(2+) from the microorganism in environmental conditions when e.g. stressed by high Ca(2+) and alkaline pH, and the Bacillus subtilis putative P-type Ca(2+)-transport ATPase encoded by the yloB gene, which is expressed during sporulation. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP048103.1\|WP_009709042.1\|2254954_2256001_+\|putative-sulfate-exporter-family-transporter	gnl\|CDD\|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	9.3246e-76
NZ_CP048103.1\|WP_040387961.1\|2256099_2256939_-\|diaminopimelate-epimerase	gnl\|CDD\|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	3.57027e-141
NZ_CP048103.1\|WP_084189798.1\|2245718_2246435_+\|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl\|CDD\|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	8.3896e-88
NZ_CP048103.1\|WP_084189800.1\|2262844_2263021_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|366316	pfam00805, Pentapeptide, Pentapeptide repeats (8 copies). These repeats are found in many cyanobacterial proteins. The repeats were first identified in hglK. The function of these repeats is unknown. The structure of this repeat has been predicted to be a beta-helix. The repeat can be approximately described as A(D/N)LXX, where X can be any amino acid.	0.000147576
NZ_CP048103.1\|WP_009709041.1\|2253923_2254832_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.43981e-87
NZ_CP048103.1\|WP_159439660.1\|2263545_2264502_-\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.65032e-76
NZ_CP048103.1\|WP_076523299.1\|2242162_2243146_-\|galactose-1-phosphate-uridylyltransferase	gnl\|CDD\|238341	cd00608, GalT, Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate. The structure of E.coli GalT reveals that the enzyme contains two identical subunits. It also demonstrates that the active site is formed by amino acid residues from both subunits of the dimer.	1.4644e-119

>NZ_CP048103.1|WP_009709037.1|2248782_2248926_+|hypothetical-protein
MALTDLPAIKPSKGVNFLFTAFLVVFIFFFTQPKSTDVSPGSNGNLV
>NZ_CP048103.1|WP_084189799.1|2248324_2248792_+|hypothetical-protein
MRKKRMNLRARKTVHSLYQDMNLITAALLLTGQLTIGGLFVNPAGGFAIPLTGPITGGTRTEGKSGSRAATLMIDVIDIIIVILLLIDQISVRSTFVTSGGTFAVVVSGPIFGLPKIEADLPTRKRFFAHFGEHLTPPDHPSVPKRRKRRGHAWL
>NZ_CP048103.1|WP_040387239.1|2247639_2248119_+|CarD-family-transcriptional-regulator
MFQVGDKIVYPLHGAGVIDAVEEKEILGKKQRYYIIHMSLGNVQIMIPADRIDDMGLRHIVDPDTMENVFLLFNDDPSASSGSWNQRFRMNMDKMKTGDIFKTTEVIRDLAQINKEKSLGTGEKKLLDNAKQILISELVLVKEIEEEQAIQLLDEAAHC
>NZ_CP048103.1|WP_040387238.1|2247136_2247337_-|cold-shock-protein
MIEGTVKWFNADKGFGFIEVEGRDDVFVHFSAIQSEGFKSLDEGDKVSFEIVQGNRGDQAANVVKL
>NZ_CP048103.1|WP_084189798.1|2245718_2246435_+|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MTQTIAIISAMPEEVEPLRQQLGIGEPEQVGGLELSMTEWNGLQVITAVSGIGKAQAGACMQYLITRHHPTEVVNIGAAGALSDRLRIGDLVLVEESIYHDVDCTGVGQPPHTFPGVPRVIPSDPALVRTLSHVAANLGIPCHSGRVATGDAFVSDKEQRLSIRRETEAVLVEMETAAFAQIAHLNGVPFVSVRSVSDNADGGAEVSFQTFLTEVSKRNATLLEAYLRAKAEQESSRH
>NZ_CP048103.1|WP_076523305.1|2244112_2245468_-|glucose-6-phosphate-isomerase
MGKGLRFDYSSALAFFGPHELEQMAPAVQMAHDQLHGRSGAGREVLGWIDLPETYDREEFKRIRIAADKIRSDSDALVVIGIGGSYLGARAALEMLTHTYYNEQPPGERRGPEIHFAGNHLSSTGLVHLLQHLKGKRVSLNVISKSGTTTEPAIAFRILKEWMEQQYGREGARKRIYATTDRKRGALKQLAETEGYETFVIPDDVGGRYSVLTAVGLLPIAAAGIDLDQMMAGAREAGVAFGAPDLMENDAYQYAAIRNILYRKGKHVELLVHYEPALQYFSEWWKQLFGESEGKDGKGIFPASVQFTTDLHSMGQYIQEGHRNLFETVIQVEQPSESLTIGKDPDNLDGLNYLAGRTMDEVNRKALEATMLAHTDGGVPNLRLRIPEISPFNFGEMVYFFEKACGISGYLMGVNPFDQPGVEAYKRNMFALLGKPGFEGEGEKLNRRLNP
>NZ_CP048103.1|WP_076523303.1|2243699_2243975_+|hypothetical-protein
MKKTEKVKETKKVKETKKAKTSTDGKSKKGAKQTTPKGKQTKKSPPKKKVNIKKEARRKKKQAELGVELLYVFCGFILAGAILFISSLVRG
>NZ_CP048103.1|WP_076523301.1|2243397_2243598_-|hypothetical-protein
MVENKLHHLKFNIISSSGRVNLGDTVNVRSQVKFYLVGRGFVIGDCTGTSYGMRNQQVDPDSADQS
>NZ_CP048103.1|WP_076523299.1|2242162_2243146_-|galactose-1-phosphate-uridylyltransferase
MELRYNPLLDDWTMVASNRKDRPTLPRTDCPFCPGSGKVPDSYEVLKYDNDFPALMPDPPAPDPVGSAFYRTEKAHGKCEVILYSPEHQVTLPELPVPHIEKLVDLWTERFAELEKDPRHQYVLIFENRGEEVGVTMPHPHGQIYAYSRMPLKIQRELSSCKAHHERTGRCLICEMNREEVKFQGRVIAENDHFLAYLPFFTDYPYGLFIVSKQHLTALTDFSRSQKRSLAGILKEMTGAMDSLFNRPFPYMMVLHQRPVNGEDVEKYYHFHIEFYTPLRERDKIKYYASSEMGAWAACNPSSVEETAAELREAHRRFLEQEGGGLR
>NZ_CP048103.1|WP_009709026.1|2240975_2242166_-|galactokinase
MRGGEAAREAFKGVYGPGEVRLFFAPGRVNLIGEHTDYTGGYVFPAALTLGTWAALRPRKDGVFRLASTRFAERAEFRADEVRERREEGWTNFPKGMIRELADSGAGLPGADILYHGDLPPGAGLSSSASIGLVTGVALAALEDRRWRMLDLIQMVRRSENRYIGVQCGIMDPFASGMGKAGHAILLHCRRLDYRHVPLKLGDYRLMIIHTNKVRELAESRYNQRRRECEEGFRQLRQRLPEATDLGSVGEEAWLEAREAVESPLLRRRLAHVVTENARVLRSEQALVAGDLHRFGELMKESHRSLRENYEVTGRELDTLFEAAIQVPGCIGARMTGAGFGGCTVNLVHREALETFRRRVGEQYIAETGREPVFHETAIGDGAREIGEEEQAWQCW
>NZ_CP048103.1|WP_076523497.1|2252464_2253703_-|threonine-ammonia-lyase-IlvA
MSVEEIIVANHILKDVIIHTPLQRDPVLSAKYDCDLYLKREDLQVVRSFKIRGAYNVIRHLDPQKLERGVVCASAGNHAQGVAFSCQSLQIPGRIFMPSTTPKQKVSQVKRFGGSFVEVVLTGDTFDDSLAEALRYGEEKGMEFIHPFENPLTIAGQGTVGLEILNDLQEPVDYLFVGIGGGGLAAGVASYVKSLSPDTRVIGVEPAGAPSMKSSVEAGRVIELNEIEKFVDGAAVRQVGELTHAICRETVDEFTLVPEGKVCTTILNLYNENAIVAEPAGALSIAALDGFREQIRGKTVVCVVSGGNNDIDRMQEIKERSLIHEGLKHYFSVNFPQRAGALREFLDEVLGPDDDITRFEYTKKNSKENGPALVGIELKRKEDYAPLIDRMNRKGFHYIEINKDPHLFNLLI
>NZ_CP048103.1|WP_009709041.1|2253923_2254832_-|LysR-family-transcriptional-regulator
MDSHLRVFVTVAEKKNFSRTAEELHMTQPAVSQYIQALERTVGAKLIERNNKFVCLTKAGDIVYHHAKEIMGLYTHMQSLVDDLMQVASGNLSIGASYTFGEYILPHVIARLHGRYPLIQPTVTIGNTTEIAESVADRRLDVGIVEGEFNHERLNTESFAKDWMVIIVPADHPLTRQKEVTVPDLKKENWIVREKGSGTREATEKMFKKLGFTPDHLMEFGSTQLIKESVEAGLGISFLSNWAVRKEESLGTIHLLKMDGTPIPRKFTWITQDTPFQTKALEVFIDEMRRLETLFSTDDPRQ
>NZ_CP048103.1|WP_009709042.1|2254954_2256001_+|putative-sulfate-exporter-family-transporter
MSEQALENVQHQDMETKPSGTNRRKGWIGGIIFTFVIAVLGYGLSHLPGFDRIGPLASAIVIAVAFRQFSGYPESIRPGIQFSSKKLLRFAIILYGLRLNIEVVLHDGLPLLVRGAGTILFAIGLTLLLARWLKANTAISLLLGVGTGVCGAAAIAAVSPILKNKDEDTAISVGIIALVGTCFAIGYTLIKPFVPLDSIQYGIWSGISLHEIAHVALAAAPAGQDALAIALLAKLGRVFLLVPLCFIFMYWMKRKNNGEADAHIEFPWFLVGFILMSFVGTYLLGKAIPVSESVMDGLSQTATLILTMAMVGLGLNVNLRDLRSKALRPLIAMVITSVLLSVVTFFVS
>NZ_CP048103.1|WP_040387961.1|2256099_2256939_-|diaminopimelate-epimerase
MRFTKMHGLGNDFIVVTADTWPQEAPELARRLCDRRFGVGADGLVFLLPSRAGDVRMRILNADGSEAEQCGNAVRCVAKYYYERISGAKKEIIVETGAGLQSVRLETDGSQVESICVDMGRPILEADRVPVALEGERVVAHPVKIGEESFRFTAVSMGNPHAVIFVDDAAAFPVETWGPRLETHPLFPNKTNVEFVTVHSPRELEMRVWERGVGPTLACGTGACASLVAAVLNGTADRRARVRLKGGDLEIEWREGDDRVYMTGPARTVFEGEWNEGSG
>NZ_CP048103.1|WP_172998917.1|2257092_2259870_-|calcium-translocating-P-type-ATPase,-SERCA-type
MVSMRCFWDKGGGNVSEGSRYLDWDMEKLTAHFDVDPAEGLEDTEAEKRKEKVGPNQLAEGKRLSPLALLLNQFKDFMVLVLLAATLISGLLGEYTDAIAIIAIVLLNAVLGFIQEFRAEKSLTALKELSAPMARVKRNGSWKRIPAAELVPGDIVSLESGDRIPADLRLIHAENLYIEESALTGESVPVSKTGSVIRGGEEVPLGDRKNMAFLGTMAVRGTGIGLVVFTGMKTEMGKIAHLIQTTESMQTPLQNRLEQLGKVLIVVSLFLTAVVVLTGIIHGHDAYKMFLAGVSLAVAAIPEGLPAIVTIALALGVQRMIRRRAIVRKLPSVETLGCASVICSDKTGTLTQNKMTVTHLWVDGRRLEVSGSGYEPEGEFTFDGRKVNPGRDPGLKRLLEVAVLCNNARLIRESNREGMLRRKQESWRIDGDPTEGALMVVGAKGGHTGESLEKEWKRVREFPFDSERKMMSVLVEKGKGERILMTKGAPDVLLNRCTHLLQGGRPVPLTEAMREKILSHNDQLAAMALRNLAFACREWKGAEPGRESEAERELVFVGLAGMIDPPREEVKKAIRTCRRAGIRTVMITGDHQTTAVAIARQLGILTEGGLTVNGNELQRMSDREFEQKAKHIQVYARVSPEHKLKIVKALQKDGDVVAMTGDGVNDAPAIKAADIGIAMGITGTDVSKEASSLILSDDNFATIVSAIEEGRSIYDNIRKFISYLLASNVGEILVMFLAMLAGMPLPLVPIQILWVNLVTDGLPAMALGVDPGEEDTMDRPPRNSRESIFARGVGWKIVSRGLLIGTFTLASFWVAYHETPDDLLRAQTIAFATLVLAQLVYVFDCRSSQSVFHRNPLNNLPLVLAVVSSALLLLVVMYYPPLQPVFHTVALGFREWALVVAASTLPTLLAGLIDLVRPIRRPAHS
>NZ_CP048103.1|WP_009709046.1|2260080_2261787_+|fibronectin/fibrinogen-binding-protein
MSIDGIAIRAVVHELEELLIGGRVTKIYQPGEADLILHIRNRGRNRRLLLSAHPAYPRLHLTEQATENPLTPPMFCMLLRKHCEGGVIEGIRQVGMERIIHMDLRCRDELGDEVIRRLVVEVMGRHSNIILIDPASGKILDGIRRVTPDISRHRQVLPGLLYQAPPEQDKKDPLVAEREDFLRSLHFNEGKLDRQIVARFAGIGPQTAREILHRGGLGDREQLWSAFHTLMNEIRDHLYQPQIVYDRKPAFSVIPLTHLRGERETFDSVGRCLEAFYHGKAERDRARQQNHDLIRNLKNILDKNETKIEKLTQEWTDTEKAETHRIYGELLTSFMHQVKRGDQVLKAVNYYDPESPEVTIPLDPRLTPSENAQRYFRLYNKAKSARKWNREQIEKTRRENEYLESVLVQLQNAGPREAEEIKEELQEEGWLKAKPQKKRKKQTRKPEPDTYFSSEGIPILVGRNNKQNDFLTHRIAAPTDTWLHTKEIPGSHVVIRGKSFGEATLHEAAMLAAWHSKARESSQVPVDHTLIKHVKKPSGTPPGFVIYEEQKTLYVTPEESEIRKLKRE
>NZ_CP048103.1|WP_143457014.1|2261885_2262113_-|hypothetical-protein
MKKNQRKYRPVPARRRTSVPVVKTAAGTRIPVQTQVALGKGKPNPKTEEVLFFCPPFFFPPPFAFFGPFGAGFFI
>NZ_CP048103.1|WP_076523499.1|2262444_2262822_+|multidrug-efflux-SMR-transporter
MHWVYLIFAILFEVAGTMSMKLSHGFTKLWPSLGMVVFYILAFAGLTLSLKQMPVSIAYAVWSGLGTAVIAVLGYLIFQESMTWLKAGSILLIVLGVIGLNLGEGSDASDSPEPDRHPVETVDAE
>NZ_CP048103.1|WP_084189800.1|2262844_2263021_-|pentapeptide-repeat-containing-protein
MRRADLSYATLDGACLKGADLREAIMEGIPWKELNLEGTRIDMAQAVALAQSLGARVE
>NZ_CP048103.1|WP_159439660.1|2263545_2264502_-|polysaccharide-deacetylase-family-protein
MKGTLLRTGLFLFMAVWVGFSTAWNASYAGQAGKRLQPAPEEKSTETVKAPARSESRKAEGQTEEREPQKQAQKEEPKEKPEQQQSVQKQPDEKQVAQGTKSAREKTEKKADLPVVVYQGPNEKKRVALTFDDGPDRTYTPQVLNILKGEQVPATFFVVGKEVNRNGDVAKRIVSEGHVIANHTWSHLYLPNLPDKRVEGELDRAVQAVKKATGKEMSLMRPPYGAVKGKEERITHIGHRIINWDVDTNDWKPGRTSQQILAAVKGHTVPGSIVLMHSGGGNRSATVQALPEIIRYLKQQGYEFVTVDQLLDVPAYIN

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Crispr_ID: NZ_CP048103_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_13

2383171-2383527

Orphan

Consensus_repeat	Method
GTTTTAGATGAACGTAGTGGGATATAAAG	CRISPRCasFinder
GTTTTAGATGAACGTAGTGGGATATAAAG	CRT
GTTTTAGATGAACGTAGTGGGATATAAAG	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP048103_13

>merge|NZ_CP048103|13|2383171-2383527|CRISPRCasFinder,CRT,PILER-CR
GTTTTAGATGAACGTAGTGGGATATAAAGTGGGCATTTGAAAAGGTGAAACCGGCCACATCGCAAGTTTTAGATGAACGTAGTGGGATATAAAGGTGGTTAGGTGGGAGTGCGGGTTATTCCTGCATATGTTTTAGATGAACGGTGGGATATAAAGTAGGCAATGTTTCGAACACGTCCGGCCACTATATGCTCTGTTTTAGATGAACGTAGTGGGATATAAAGACAGCACTGCGATCAATACTGCTGGCCTCATCCTGAAGGTTTTAGATGAACGTAGTGGGATATAAAGCAGCCGTTTGAATCGGCGGTCGTGACCCTAACCTATCGTTTTAGATGAACGTAGTGGGATATAAAG

>NZ_CP048103|13|13|2383171-2383527|CRISPRCasFinder
GTTTTAGATGAACGTAGTGGGATATAAAG	TGGGCATTTGAAAAGGTGAAACCGGCCACATCGCAA
GTTTTAGATGAACGTAGTGGGATATAAAG	GTGGTTAGGTGGGAGTGCGGGTTATTCCTGCATAT
GTTTTAGATGAACGGTGGGATATAAAGTA	GGCAATGTTTCGAACACGTCCGGCCACTATATGCTCT
GTTTTAGATGAACGTAGTGGGATATAAAG	ACAGCACTGCGATCAATACTGCTGGCCTCATCCTGAAG
GTTTTAGATGAACGTAGTGGGATATAAAG	CAGCCGTTTGAATCGGCGGTCGTGACCCTAACCTATC
GTTTTAGATGAACGTAGTGGGATATAAAG

>NZ_CP048103|13|5|2383171-2383527|CRT
GTTTTAGATGAACGTAGTGGGATATAAAG	TGGGCATTTGAAAAGGTGAAACCGGCCACATCGCAA
GTTTTAGATGAACGTAGTGGGATATAAAG	GTGGTTAGGTGGGAGTGCGGGTTATTCCTGCATAT
GTTTTAGATGAACGGTGGGATATAAAGTA	GGCAATGTTTCGAACACGTCCGGCCACTATATGCTCT
GTTTTAGATGAACGTAGTGGGATATAAAG	ACAGCACTGCGATCAATACTGCTGGCCTCATCCTGAAG
GTTTTAGATGAACGTAGTGGGATATAAAG	CAGCCGTTTGAATCGGCGGTCGTGACCCTAACCTATC
GTTTTAGATGAACGTAGTGGGATATAAAG

>NZ_CP048103|13|4|2383366-2383527|PILER-CR
GTTTTAGATGAACGTAGTGGGATATAAAG	ACAGCACTGCGATCAATACTGCTGGCCTCATCCTGAAG
GTTTTAGATGAACGTAGTGGGATATAAAG	CAGCCGTTTGAATCGGCGGTCGTGACCCTAACCTATC
GTTTTAGATGAACGTAGTGGGATATAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_009709273.1\|2389403_2390435_-\|N-acetylneuraminate-synthase	unknown	unknown	gnl\|CDD\|274655
NZ_CP048103.1\|WP_159439661.1\|2375921_2376071_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076523418.1\|2377801_2378167_-\|type-II-secretion-system-protein	unknown	unknown	gnl\|CDD\|225076
NZ_CP048103.1\|WP_076526555.1\|2385613_2386132_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP048103.1\|WP_009709275.1\|2387189_2388263_+\|YheC/YheD-family-protein	unknown	unknown	gnl\|CDD\|373047
NZ_CP048103.1\|WP_040387269.1\|2376067_2376271_-\|YqzE-family-protein	unknown	unknown	gnl\|CDD\|372887
NZ_CP048103.1\|WP_076526559.1\|2384514_2384979_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP048103.1\|WP_009709251.1\|2376314_2376842_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP048103.1\|WP_040387270.1\|2378163_2378574_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227305
NZ_CP048103.1\|WP_084190236.1\|2384368_2384557_+\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|372235
NZ_CP048103.1\|WP_009709274.1\|2388277_2389390_-\|UDP-N-acetylglucosamine-2-epimerase-(hydrolyzing)	unknown	unknown	gnl\|CDD\|274654
NZ_CP048103.1\|WP_076523420.1\|2378964_2380011_-\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|224376
NZ_CP048103.1\|WP_076523422.1\|2380003_2381086_-\|type-II/IV-secretion-system-protein	unknown	unknown	gnl\|CDD\|225363
NZ_CP048103.1\|WP_076523416.1\|2377340_2377775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_159439662.1\|2378605_2378947_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	unknown	unknown	gnl\|CDD\|226912
NZ_CP048103.1\|WP_009709277.1\|2386158_2386773_+\|FMN-binding-negative-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225366
NZ_CP048103.1\|WP_076526557.1\|2385137_2385590_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP048103.1\|WP_076526561.1\|2383863_2384313_+\|SMI1/KNR4-family-protein	unknown	unknown	gnl\|CDD\|378155
NZ_CP048103.1\|WP_076523413.1\|2376957_2377344_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_159439754.1\|2383679_2383814_+\|transposase	unknown	unknown	gnl\|CDD\|366690

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_009709273.1\|2389403_2390435_-\|N-acetylneuraminate-synthase	gnl\|CDD\|274655	TIGR03569, ORF_8_similar_to_NeuB_family, N-acetylneuraminate synthase. This family is a subset of the pfam03102 and is believed to include only authentic NeuB N-acetylneuraminate (sialic acid) synthase enzymes. The majority of the genes identified by this model are observed adjacent to both the NeuA and NeuC genes which together effect the biosynthesis of CMP-N-acetylneuraminate from UDP-N-acetylglucosamine.	2.62471e-149
NZ_CP048103.1\|WP_076523418.1\|2377801_2378167_-\|type-II-secretion-system-protein	gnl\|CDD\|225076	COG2165, PulG, Type II secretory pathway, pseudopilin PulG [Cell motility and secretion / Intracellular trafficking and secretion].	0.000526957
NZ_CP048103.1\|WP_076526555.1\|2385613_2386132_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.84807e-16
NZ_CP048103.1\|WP_040387269.1\|2376067_2376271_-\|YqzE-family-protein	gnl\|CDD\|372887	pfam14038, YqzE, YqzE-like protein. The YqzE-like protein family includes the B. subtilis YqzE protein, which is functionally uncharacterized. It is a part of the ComG operon, which is regulated by the competence transcription factor ComK. This family of proteins is found in bacteria. Proteins in this family are typically between 49 and 66 amino acids in length.	2.41246e-18
NZ_CP048103.1\|WP_076526559.1\|2384514_2384979_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	5.75015e-21
NZ_CP048103.1\|WP_009709251.1\|2376314_2376842_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	1.98635e-59
NZ_CP048103.1\|WP_040387270.1\|2378163_2378574_-\|hypothetical-protein	gnl\|CDD\|227305	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion].	1.55235e-07
NZ_CP048103.1\|WP_084190236.1\|2384368_2384557_+\|HNH-endonuclease	gnl\|CDD\|372235	pfam12639, Colicin-DNase, DNase/tRNase domain of colicin-like bacteriocin. Colicin-like bacteriocins are complex structures with an N-terminal beta-barrel translocation domain (pfam09000), a long double-alpha-helical receptor-binding domain (pfam11570) and this C-terminal RNAse/DNase domain with endonuclease activity. Their competitor bacteriocidal action is by a process that involves binding to a surface receptor, entering the cell, and, finally, killing it. The lethal action of colicin E3 is a specific cleavage in the ribosomal decoding A site. The crystal structure of colicin E3 reveals a Y-shaped molecule with the receptor binding domain forming a 100 Angstrom long stalk and the two globular heads of the translocation domain and this catalytic domain comprising the two arms.	1.8694e-10
NZ_CP048103.1\|WP_009709274.1\|2388277_2389390_-\|UDP-N-acetylglucosamine-2-epimerase-(hydrolyzing)	gnl\|CDD\|274654	TIGR03568, Polysialic_acid_biosynthesis_protein_P7, UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.	3.04936e-141
NZ_CP048103.1\|WP_159439754.1\|2383679_2383814_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	6.67198e-05
NZ_CP048103.1\|WP_076523422.1\|2380003_2381086_-\|type-II/IV-secretion-system-protein	gnl\|CDD\|225363	COG2804, PulE, Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].	1.77966e-167
NZ_CP048103.1\|WP_159439662.1\|2378605_2378947_-\|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein	gnl\|CDD\|226912	COG4537, ComGC, Competence protein ComGC [Intracellular trafficking and secretion].	1.41058e-21
NZ_CP048103.1\|WP_009709277.1\|2386158_2386773_+\|FMN-binding-negative-transcriptional-regulator	gnl\|CDD\|225366	COG2808, PaiB, Transcriptional regulator [Transcription].	3.1448e-75
NZ_CP048103.1\|WP_076526557.1\|2385137_2385590_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.73069e-17
NZ_CP048103.1\|WP_076526561.1\|2383863_2384313_+\|SMI1/KNR4-family-protein	gnl\|CDD\|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	1.47144e-15
NZ_CP048103.1\|WP_076523420.1\|2378964_2380011_-\|type-II-secretion-system-F-family-protein	gnl\|CDD\|224376	COG1459, PulF, Type II secretory pathway, component PulF [Cell motility and secretion / Intracellular trafficking and secretion].	1.94604e-64
NZ_CP048103.1\|WP_009709275.1\|2387189_2388263_+\|YheC/YheD-family-protein	gnl\|CDD\|373047	pfam14398, ATPgrasp_YheCD, YheC/D like ATP-grasp. A member of the ATP-grasp fold predicted to be involved in the modification/biosynthesis of spore-wall and capsular proteins.	7.90742e-52

>NZ_CP048103.1|WP_076523422.1|2380003_2381086_-|type-II/IV-secretion-system-protein
MDAAQYATRLLEEAIDGRASDIHIEPREEELCIRQRVDGFLISVDSLPREEMYPLISRIKVMGHLDIGEKRLPQDGALTVTHRGERVDVRISSMPTLHGEKLVLRLLRNRPERMTLSELGMGADEKKRVEGIIRRPGGLVLVTGPTGSGKTTTLYAILQDLNREELNLVTLEDPIEFQLSGVNQIQVNPKSGLTFARGLRAVLRQDPNIIMVGEIRDEETADIAIRAALTGHLVLSSLHTVDACSSVTRLLDMGVAPYRIASALTGVVAQRLVRLICQDCKGKGCEDCRQVGYRNRTGVFEVLEVEEDFHPLIVERAPLSRLRQTLRKAGMRSLSDATLEKVMTGETTISEYHRVVDVHE
>NZ_CP048103.1|WP_076523420.1|2378964_2380011_-|type-II-secretion-system-F-family-protein
MSKKGRRKWNADRLTLFSQHLANLLEAGFPLVPSIRLLSEQGVIGTGEAERILGSLDQGKSLSAALEAEGMPALFTSLIRAAEEHGDYGFGLKQCEVYYRERGRLIRELTRALTYPMVVLMLVGLAFLFLMTTVVPRFSEMYETMGLTLPLYTRIFLRIHQSLQAGLFGLTAALLLFGLICLYIRRLPPEQRRRWTSPLYSLPVVRSFFALRFTHYLGIQLGSLLKSGLPLLKAVEVMDSLAPWDPFRRGIFRVREQLLAGESLHRALEREEKLFLPSLPGLVALGEETGALDRSLLSLAQGTELMIKERLDRLTHSLEPILIFLIGMMMAATVLALFLPMLHLVEAI
>NZ_CP048103.1|WP_159439662.1|2378605_2378947_-|prepilin-type-N-terminal-cleavage/methylation-domain-containing-protein
MNLRRLQQDERGFTLIEMLVVLFVIAVIIAIALPNLKAAGESAQNRACEANRKLIGSQADNYYLELGSYPSNVGQMKNRGYLRTVPTCPAKGKYSIHKNASVEKRVKCSIHGD
>NZ_CP048103.1|WP_040387270.1|2378163_2378574_-|hypothetical-protein
MVELSLTLALAGLLTSLALPAFVQWGDRLEQEQFMELFSEEIRMTQREASVREEVTFLQLDSKGRKYSIHRGKERLREAKVPARYRLDSNYPSHRLVFQPSGQARGGTFRLMKNGKTVGRIVVQVASGRPRVEVVP
>NZ_CP048103.1|WP_076523418.1|2377801_2378167_-|type-II-secretion-system-protein
MIRGEAGFTLAETVTALMVFGVLVSVALPILGELQIRHQSHVHRMEALILLQSEMERVQSSTVPVPATGEKNKKGKGVNYRIRWEKKYAEPHLAGTYVEVTWKDANQKRQRETLKGLSFRR
>NZ_CP048103.1|WP_076523416.1|2377340_2377775_-|hypothetical-protein
MELAVVLSLLALLIPVVLGVSLELERGLKKMVAEQQLHSAAETFIADVRDDLRRGENFRLSSTGWLLFDLPEGETIRYKHQRRRVIRSVRPPGASRFKGTTILLDDVYFIGFDPGSDGVRFDLGLQNWHGDLDTTFFVRGRVAQ
>NZ_CP048103.1|WP_076523413.1|2376957_2377344_-|hypothetical-protein
MSSRGIQNERGIALPFVLAVTVLAFLLTTAALAGYSHSLQGAQMEQKRVRAQYAAESGIARMQQKVCDDPAWNQSLSTPMNGMKTETRIEGTGGDRVRIHSVAKGEGVRQTIRVEVDRKSCQVVRWEP
>NZ_CP048103.1|WP_009709251.1|2376314_2376842_-|shikimate-kinase
MMGKHIILIGFMGTGKSTVGEMLAEKLECPWLDTDTEVERLAGKKIPRLFEEGGEAHFRRWEKKVLKQVLEQTPGVITTGGGIVLDPENVSWIRSSGWVVALDASEEELLRRLATDQSRPLLRGDARQRVRDLKRARQGVYDFADLFLDTTGSSPRETAAKILQQWKEMTGSSRV
>NZ_CP048103.1|WP_040387269.1|2376067_2376271_-|YqzE-family-protein
MSTNDYLKFLVQEMVKYMDTPREERREARMLRREQRMHWTYRLFGMVPFGMKMFAGQQKNRLKGGSR
>NZ_CP048103.1|WP_159439661.1|2375921_2376071_-|hypothetical-protein
MKQEHKTYKLVNLEDRSDVIERITQAEKDLNRLVHGRVALIAYVKDEKE
>NZ_CP048103.1|WP_159439754.1|2383679_2383814_+|transposase
MLEGLKQNRSISEVCRDHQISQALYYQWRDAFLDGVKAGLRPKR
>NZ_CP048103.1|WP_076526561.1|2383863_2384313_+|SMI1/KNR4-family-protein
MGGIIWKYAEGPVNEKAVTQTEELLGVRLPDDFKKIAVENDCGIPHPGRYDLNGGVMVFGQLFSMDPNRDGNIVEVTRTGRSEHGMSNSIVVFADDPAGNFLCFDYSQLNDGYPAIIFWDHEIEGGDPEKICNTFTQLFDMFHNDDGVN
>NZ_CP048103.1|WP_084190236.1|2384368_2384557_+|HNH-endonuclease
MPGLTRHHHQQEGRMQLVDKKIHRKTHHTGGRVAWGGGNKISLKGSVNQWVNKLLGIINEHL
>NZ_CP048103.1|WP_076526559.1|2384514_2384979_+|SMI1/KNR4-family-protein
MGKQITWDYKRTPVTEEVLSEKEKLLGIRLPDDFREVFIENHGAGPVPEYYYAPNGNSRNFGFLLALDEDEDEIEFTEANSPYMKREHDMPHEVVIFSIDPAGNFLCFDYNQLIDGYPAIIFWDHEVEGGNLKKICNTFTELLDMLHDDEDDVS
>NZ_CP048103.1|WP_076526557.1|2385137_2385590_+|MarR-family-transcriptional-regulator
MKQILREIGMIARALDSISNIEFKELELSKGQYLYVVRICENPGIIQEKVAEMIKVDRTTAARAIKKLEMNGFIEKRADAQNKKIKKLFPTEKAKKIYPLIIRENDHSNEVALQGFSEEDAEMIFNQLQRIRKNIEKDWEFVKKGNKRQY
>NZ_CP048103.1|WP_076526555.1|2385613_2386132_+|GNAT-family-N-acetyltransferase
MTIKIRKCTLDDLQTLQHLSRETFYDTFKEQNSAENMQAYLEKAFNTAQLKKELMTDVSHFYFVTVDHEVAGYLKINTADAQTEPMGDDALEIERIYIRDSFQKQGLGKYVLQQAMAMAQEQNKTKIWLGVWEKNENALAFYKKMGFVQSGAHAFYMGDEEQTDLIMMKTLR
>NZ_CP048103.1|WP_009709277.1|2386158_2386773_+|FMN-binding-negative-transcriptional-regulator
MYIPKKYKVTDVNELLDFVETNAFATIVTMKDNKPIATHLPLRLSKKEDTYYLTGHFAYGNPQWRTLAENDQVLVMFQGPHAYISSSWYSHEDVPTWDYQAVHIYGKASVLEKEELVKDLTGMLEKYEAHREHPVLWDTLSPSLLERELKGIVGFQVKIEDIQASYKLSQNQNDTDFHNIIENLQKEGDPNARAIAEQMKKLRK
>NZ_CP048103.1|WP_009709275.1|2387189_2388263_+|YheC/YheD-family-protein
MIGVFMNKRPLNSMIRGNTSYEKLEFYRHFVDTFKEPLCFYSLDNIDPYRASIDGYVLLPGKNLTQAEVRVPEHHFSRAIIYRQRNLNKIKKFIRNHRTRFYQFQSKKERNKWTNYELLNNVPEIKSHLPETYPLTWDNVINILEKYKQAIVKPIYGSLGKKVVLIEKRGQIYTIKEKNEFRLVHSEVALEHLEMYYLSKFKRPKRFIVQQKVNTDRFRHRIYECRVSVQKTSSGEWEVTGWAVRLAQKGDYLTNVSQGSEIIPFSRIFNPKSDTAYTIRDVTTRIAKQFEKHFPDTIDLGIDLMLDNNKHVWFIEANLRDQRLSYYNDREMWRRTTITPLVFIQNQMVSESVTKDG
>NZ_CP048103.1|WP_009709274.1|2388277_2389390_-|UDP-N-acetylglucosamine-2-epimerase-(hydrolyzing)
MKLIVISGTRADYGIYRPLLFELHRDPVIHLQLVVTGMHLLKEYGQTIDDVEQDPFEVIAQPSILVKGDSTYAMSQSVGIATLYFSDILHFHQPDAILLLGDRGEMLAAAIAAHYQNIAIVHLHGGEKSGSADDAVRHAISKLAHLHFVSTFQAKKALQHLGEEEWRIFPVGSLRKHDIEQIKLLDDMKKAQLMKKYRLSSKQKNVLVMMHPDTKEQKPYSQQIEVVLKALERYSEINLIFIGPNSDAGGDIFREYMQSYCKQSKWCSYHASIPSDEYLFLLSQVDLLIGNSSSGIIEAPFFHLPFINVGNRQQDRTHGDNVYHVPYRANKIKAKIQEVLQSPTKIIKHNPYDIVKAPAHEIVKQLKISL
>NZ_CP048103.1|WP_009709273.1|2389403_2390435_-|N-acetylneuraminate-synthase
MVKIGNYIISERSPVYIIAEIGVNHNGSVELAKKLIDRAVAAGANAVKFQTFDPDEMVSEDADLAPYQKRCSNKKQKEMLKHLALTPGQLEILKKDCDHKGITWLSTPFDIKSARFLNKLKVPAFKVGSGDLTNIPLLLEIAKFGKPILLSTGMAELTDIETALNYLNHPSDLVLLHCTSAYPAPFADLHLRVIDTLKAAFPHLVGYSDHSSGVEIPLAATALGYKIIEKHFTLDKRMEGPDHRASLEPDEFCQMVTGIRHVEKALGTSHKLIRPSEAELKKRVRKGIYACKDLDKGIMLTEEDLAYLRPLSEIEASQFQCVVGRRLNRSIKKGDSLRWSDLN

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Crispr_ID: NZ_CP048103_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_14

2404860-2405499

Unclear

Consensus_repeat	Method
GTTTTAGATGAACGTAGTGGGATATAAAG	PILER-CR
CTTTATATCCCACTACGTTCATCTAAAAC	CRISPRCasFinder
CTTTATATCCCACTACGTTCATCTAAAAC	CRT

9 spacers

cas2,cas1,cas4,cas3,cas5,cas7,cas8b2,cas6

The CRISPR arrays of NZ_CP048103_14

>merge|NZ_CP048103|14|2404860-2405499|PILER-CR,CRISPRCasFinder,CRT
CTTTATATCCCACTACGTTCATCTAAAACAAGGGTGGATCAGTCTTCACCGGCAATTACAGGATCACCTTTATATCCCACTACGTTCATCTAAAACGCAGGATGAGCTTGTCAAGAAGATCGCGGATGAGTGCTTTATATCCCACTACGTTCATCTAAAACTTCCATCCATTCCGGCAGGTGTTCCCGACTCTTGATCCCTTTATATCCCACTACGTTCATCTAAAACCCCAACCGAGTCCGTTCGGATACATTCCCTTTCAGTTCTTTATATCCCACTACGTTCATCTAAAACACGTGACTACCGGTGCAGTTGGTGCGACTCCGCTTTTACGGTTTTACTTTATATCCCACTACGTTCATCTAAAACAGTGTGAACAGCGTTCCAAAAATTGTGATGACAATCGTCTTTATATCCCACTACGTTCATCTAAAACTCTGTTCAGGATTTTGCTTACCGATGTCCTGTACTTGCCTTTATATCCCACTACGTTCATCTAAAACAATCCCCGTTTAGACAATTAAGGACATAGCTTTTCGCTTTATATCCCACTACGTTCATCTAAAACATGCCACGGAACCGGCGAATACAACCCGACGGGGCAGTATCTGCTTTATATCCCACTACGTTCATCTAAAAC

>NZ_CP048103|14|5|2404860-2405499|PILER-CR
CTTTATATCCCACTACGTTCATCTAAAAC	AAGGGTGGATCAGTCTTCACCGGCAATTACAGGATCAC
CTTTATATCCCACTACGTTCATCTAAAAC	GCAGGATGAGCTTGTCAAGAAGATCGCGGATGAGTG
CTTTATATCCCACTACGTTCATCTAAAAC	TTCCATCCATTCCGGCAGGTGTTCCCGACTCTTGATCC
CTTTATATCCCACTACGTTCATCTAAAAC	CCCAACCGAGTCCGTTCGGATACATTCCCTTTCAGTT
CTTTATATCCCACTACGTTCATCTAAAAC	ACGTGACTACCGGTGCAGTTGGTGCGACTCCGCTTTTACGGTTTTA
CTTTATATCCCACTACGTTCATCTAAAAC	AGTGTGAACAGCGTTCCAAAAATTGTGATGACAATCGT
CTTTATATCCCACTACGTTCATCTAAAAC	TCTGTTCAGGATTTTGCTTACCGATGTCCTGTACTTGC
CTTTATATCCCACTACGTTCATCTAAAAC	AATCCCCGTTTAGACAATTAAGGACATAGCTTTTCG
CTTTATATCCCACTACGTTCATCTAAAAC	ATGCCACGGAACCGGCGAATACAACCCGACGGGGCAGTATCTG
CTTTATATCCCACTACGTTCATCTAAAAC

>NZ_CP048103|14|14|2404860-2405499|CRISPRCasFinder
CTTTATATCCCACTACGTTCATCTAAAAC	AAGGGTGGATCAGTCTTCACCGGCAATTACAGGATCAC
CTTTATATCCCACTACGTTCATCTAAAAC	GCAGGATGAGCTTGTCAAGAAGATCGCGGATGAGTG
CTTTATATCCCACTACGTTCATCTAAAAC	TTCCATCCATTCCGGCAGGTGTTCCCGACTCTTGATCC
CTTTATATCCCACTACGTTCATCTAAAAC	CCCAACCGAGTCCGTTCGGATACATTCCCTTTCAGTT
CTTTATATCCCACTACGTTCATCTAAAAC	ACGTGACTACCGGTGCAGTTGGTGCGACTCCGCTTTTACGGTTTTA
CTTTATATCCCACTACGTTCATCTAAAAC	AGTGTGAACAGCGTTCCAAAAATTGTGATGACAATCGT
CTTTATATCCCACTACGTTCATCTAAAAC	TCTGTTCAGGATTTTGCTTACCGATGTCCTGTACTTGC
CTTTATATCCCACTACGTTCATCTAAAAC	AATCCCCGTTTAGACAATTAAGGACATAGCTTTTCG
CTTTATATCCCACTACGTTCATCTAAAAC	ATGCCACGGAACCGGCGAATACAACCCGACGGGGCAGTATCTG
CTTTATATCCCACTACGTTCATCTAAAAC

>NZ_CP048103|14|6|2404860-2405499|CRT
CTTTATATCCCACTACGTTCATCTAAAAC	AAGGGTGGATCAGTCTTCACCGGCAATTACAGGATCAC
CTTTATATCCCACTACGTTCATCTAAAAC	GCAGGATGAGCTTGTCAAGAAGATCGCGGATGAGTG
CTTTATATCCCACTACGTTCATCTAAAAC	TTCCATCCATTCCGGCAGGTGTTCCCGACTCTTGATCC
CTTTATATCCCACTACGTTCATCTAAAAC	CCCAACCGAGTCCGTTCGGATACATTCCCTTTCAGTT
CTTTATATCCCACTACGTTCATCTAAAAC	ACGTGACTACCGGTGCAGTTGGTGCGACTCCGCTTTTACGGTTTTA
CTTTATATCCCACTACGTTCATCTAAAAC	AGTGTGAACAGCGTTCCAAAAATTGTGATGACAATCGT
CTTTATATCCCACTACGTTCATCTAAAAC	TCTGTTCAGGATTTTGCTTACCGATGTCCTGTACTTGC
CTTTATATCCCACTACGTTCATCTAAAAC	AATCCCCGTTTAGACAATTAAGGACATAGCTTTTCG
CTTTATATCCCACTACGTTCATCTAAAAC	ATGCCACGGAACCGGCGAATACAACCCGACGGGGCAGTATCTG
CTTTATATCCCACTACGTTCATCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076526465.1\|2409886_2410585_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl\|CDD\|187789
NZ_CP048103.1\|WP_076526463.1\|2407010_2407520_-\|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl\|CDD\|366863
NZ_CP048103.1\|WP_009709266.1\|2396964_2397789_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187635
NZ_CP048103.1\|WP_159439753.1\|2396150_2396981_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048103.1\|WP_076526461.1\|2406033_2407014_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl\|CDD\|274695
NZ_CP048103.1\|WP_076526490.1\|2407567_2409805_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|224124
NZ_CP048103.1\|WP_076526553.1\|2401266_2402754_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_009709268.1\|2395266_2396064_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187635
NZ_CP048103.1\|WP_009709269.1\|2394560_2395280_+\|acylneuraminate-cytidylyltransferase-family-protein	unknown	unknown	gnl\|CDD\|133006
NZ_CP048103.1\|WP_076526551.1\|2402767_2403406_+\|acetyltransferase	unknown	unknown	gnl\|CDD\|100050
NZ_CP048103.1\|WP_076526459.1\|2405689_2405953_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP048103.1\|WP_172998919.1\|2403458_2404724_-\|IS256-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_CP048103.1\|WP_040387272.1\|2397863_2398802_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369778
NZ_CP048103.1\|WP_076526470.1\|2413376_2414129_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP048103.1\|WP_076526472.1\|2414454_2415801_-\|cytosine-permease	unknown	unknown	gnl\|CDD\|271377
NZ_CP048103.1\|WP_009709263.1\|2399764_2401288_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275189
NZ_CP048103.1\|WP_076526563.1\|2398837_2399749_+\|myo-inositol-2-dehydrogenase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048103.1\|WP_076526467.1\|2410581_2411481_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	cd09687_cas7_CAS-I-B	gnl\|CDD\|274215
NZ_CP048103.1\|WP_143457196.1\|2411473_2413138_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	cas8b2	cd09665_cas8b2_CAS-I-B	gnl\|CDD\|187796
NZ_CP048103.1\|WP_076526473.1\|2415828_2416158_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380393

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076526465.1\|2409886_2410585_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|187789	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	7.47646e-32
NZ_CP048103.1\|WP_009709266.1\|2396964_2397789_+\|SDR-family-oxidoreductase	gnl\|CDD\|187635	cd08930, SDR_c8, classical (c) SDR, subgroup 8. This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.34952e-84
NZ_CP048103.1\|WP_159439753.1\|2396150_2396981_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.1864e-11
NZ_CP048103.1\|WP_076526461.1\|2406033_2407014_-\|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274695	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes Cas1 subgroup that includes Cas1 proteins of the related HMARI and TNEAP subtypes of CRISPR/Cas system.	8.84728e-163
NZ_CP048103.1\|WP_076526490.1\|2407567_2409805_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|224124	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms].	2.48202e-63
NZ_CP048103.1\|WP_076526463.1\|2407010_2407520_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.36766e-53
NZ_CP048103.1\|WP_009709268.1\|2395266_2396064_+\|SDR-family-oxidoreductase	gnl\|CDD\|187635	cd08930, SDR_c8, classical (c) SDR, subgroup 8. This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.34312e-83
NZ_CP048103.1\|WP_009709269.1\|2394560_2395280_+\|acylneuraminate-cytidylyltransferase-family-protein	gnl\|CDD\|133006	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety. CMP-N-acetylneuraminic acid synthetase (CMP-NeuAc synthetase) or acylneuraminate cytidylyltransferase catalyzes the transfer the CMP moiety of CTP to the anomeric hydroxyl group of NeuAc in the presence of Mg++. It is the second to last step in the sialylation of the oligosaccharide component of glycoconjugates by providing the activated sugar-nucleotide cytidine 5'-monophosphate N-acetylneuraminic acid (CMP-Neu5Ac), the substrate for sialyltransferases. Eukaryotic CMP-NeuAc synthetases are predominantly located in the nucleus. The activated CMP-Neu5Ac diffuses from the nucleus into the cytoplasm.	8.03847e-79
NZ_CP048103.1\|WP_076526551.1\|2402767_2403406_+\|acetyltransferase	gnl\|CDD\|100050	cd03360, LbH_AT_putative, Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.	4.31486e-60
NZ_CP048103.1\|WP_076526459.1\|2405689_2405953_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	2.84345e-24
NZ_CP048103.1\|WP_172998919.1\|2403458_2404724_-\|IS256-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	9.9855e-43
NZ_CP048103.1\|WP_040387272.1\|2397863_2398802_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	0.00344704
NZ_CP048103.1\|WP_076526470.1\|2413376_2414129_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	9.60502e-25
NZ_CP048103.1\|WP_076526472.1\|2414454_2415801_-\|cytosine-permease	gnl\|CDD\|271377	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain. This NCS1 subfamily includes Escherichia coli CodB (cytosine permease), and the Saccharomyces cerevisiae transporters: Fcy21p (Purine-cytosine permease), and vitamin B6 transporter Tpn1. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	1.89196e-61
NZ_CP048103.1\|WP_009709263.1\|2399764_2401288_+\|hypothetical-protein	gnl\|CDD\|275189	TIGR04396, hypothetical_protein, surface carbohydrate biosynthesis protein. This model describes an uncharacterized homology region found broadly in proteins of surface carbohydrate biosynthesis regions. This family shows distant homology to regions of family TIGR04326, of spore coat polysaccharide biosynthesis protein SpsB from Bacillus subtilis, etc. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	7.15259e-08
NZ_CP048103.1\|WP_076526563.1\|2398837_2399749_+\|myo-inositol-2-dehydrogenase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.94391e-13
NZ_CP048103.1\|WP_076526467.1\|2410581_2411481_-\|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl\|CDD\|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.6428e-52
NZ_CP048103.1\|WP_143457196.1\|2411473_2413138_-\|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	gnl\|CDD\|187796	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; signature gene for I-A subtype; also known as CXXC_CXXC family.	6.32413e-12
NZ_CP048103.1\|WP_076526473.1\|2415828_2416158_-\|cupin-domain-containing-protein	gnl\|CDD\|380393	cd06988, cupin_DddK, Dimethylsulfoniopropionate lyase DddK and related proteins, cupin domain. This family includes mostly bacterial proteins homologous to dimethylsulfoniopropionate lyase DddK from marine bacterium Pelagibacter. DddK cleaves dimethylsulfoniopropionate (DMSP), the organic osmolyte and antioxidant produced in marine environments, and yields acrylate and the climate-active gas dimethyl sulfide (DMS). DddK contains a double-stranded beta-helical motif which utilizes various divalent metal ions as cofactors for catalytic activity; however, nickel, an abundant metal ion in marine environments, confers the highest DMSP lyase activity. Also included in this family is Plu4264, a Photorhabdus luminescens manganese-containing cupin shown to have similar metal binding site to TM1287 decarboxylase, but two very different substrate binding pockets. The Plu4264 binding pocket shows a cavity and substrate entry point more than twice as large as and more hydrophobic than TM1287, suggesting that Plu4264 accepts a substrate that is significantly larger than that of TM1287, a putative oxalate decarboxylase. Thus, the function of Plu4264 could be similar to that of TM1287 but with a larger, less charged substrate. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.82751e-12

>NZ_CP048103.1|WP_172998919.1|2403458_2404724_-|IS256-family-transposase
MKSLHEREGKFQNDTIQLSLTQIMESAKEGLLALAVQTGLQVFQAMMQEEVTQLAGPKGKHNPNRKAVRHGVEQGSVVLGGRKVRVEKPRVRSVEGEELHLEVYQVFQDPSLLTDAALERMIHGLSTRNYEQGLGADRCGWESKFHQQKYDQPSLCGRNREKAGRAPGRRLDDRRYPALMIDGVVMADHTVVVALGVDEEGKKHILGLWEGATENAPVCKSFLMDLVDRGLSTDRGILVIIDGSKALRSAIRDVLGKQAVVQRCQVHKLRNVLDHLPERERGWVERKIKEAWRQPDADKAHRALKRLANQLDEVHPGAAASLREGMEETLTVIRLGLSELLQTTLRSTNAIESAFKTVRDVSRNVKRWRNGQQVLRWSAAGLLEAETRFRRIKGYRQLPLLKQALEQHIDSEPKENKPITA
>NZ_CP048103.1|WP_076526551.1|2402767_2403406_+|acetyltransferase
MMIGIIGTGGHAKVILDIFQNSNRKQLFEFFTSSRSNIDPIFHAYAVYKDQQDILLQSHSRIKKWHVAIGNPLVRKSKIEFLQSYHRHVISAIHRQAILANDIHIGEGTSIMAGAVVNPSVHIGTGCIINTTVSLDHDCLIGEYVNIGPGSKLAGGVQVGSLTELGTGAIVIPNKTIGKKCIIAAGAVVVNNIPDGSIAMGVPAKVVAIRSP
>NZ_CP048103.1|WP_076526553.1|2401266_2402754_+|hypothetical-protein
MYGQERLNPHYVLRYGWTKEFFEHFSPLQYRNIELPLTLVRNFHVFIRPIVNTHLSDDNFVRHMKKKHRMLTVRNAQQVLQRMPNVVRDLSKVPGRNTIVMPAIMIQFALEQFPETPVIITISNKRDKIALENKNLPPHFTVFDIYKERKKFELSETEITKLKRVANRLLRKKKQHIVFGQPRFKKWLYKHLIKAQMMVKCLHHLIINRPVGVTVDHVEIVNPGTTLSLLAATYNLPFINVPQVLISDRSLIPTRASHYLIWGENYEKWLLKRGIPSSKISIVGNLKFEYAAKAKTRSREPVRHLLRIPDEHLVVTFTTQPFSFAEQVNKNLIQWIGTASQSLPLTVIIRAHPYDPFDYCSLLSNQTNIKISPPKIDLHDLFKETDFMLTISSNTAIEAALYKKGILVLQPELPYDYEHHNNDFNAHLARARAGPVIRNSLQLRQEFDALLKNPQHRKQVVEQGQLFLKNTIAQKGSPSVLVRRFIQLLLHEKQI
>NZ_CP048103.1|WP_009709263.1|2399764_2401288_+|hypothetical-protein
MYGDDRLNNHYILRYGLTHEFFQAFHQLTHSDIEIPLTLVRYFHIWIKPFVNAQRTNDQYVQKLQKKHRFNTMKDVQKALSRGPEWKQSLPQVPQRKAILMPAMFAPLALECFHDENVILHVLSNQDRHALNICSLMENMSVYDIVKGLGQVHLSSKTRAELKARIEKLVIQNSDHELFGRPDFKMWLLAHSFRSAKMIDALDQLIRQLRIGVILDQVEITMTTSILSLLARKYGLPFINMPQVLITDRSLIPTRASHYYVWGENYKKWFQKRGIPSSKIKVIGNWKFELAKRNSQAMSRSEFGSRFGIPDTHHILTYTTQPLSSQVNQRVMEWIKQISPSFSVTFLIRQHPGASYDYSSALRFPNIVFVPSTLNLYHLLAITDILMTVSSNTAIEAAMLGKGVFVLQPPIQYDYEFNNNDFNHHLVKAGAGPSITSPTDMKDNLERLTTDKTYLACLQKQGKRFLQKTLQTNPPPSIQIKNLVKRLICNDSSVKKWGIEVCTDKKG
>NZ_CP048103.1|WP_076526563.1|2398837_2399749_+|myo-inositol-2-dehydrogenase
MAKAYAEVLKAFCLPFDVVGRSESSVGSFMKETGVPARSGGVEEVVGRRPRLPGFAIVAVDVEQLAPATLFLLRMGVKNLLVEKPGGLNGEEIAEVAREAKEQQANVYIAYNRRFYASVRKARQMIERDGGVCSFTFDFSERSDLVAVSSHSPEVKKAWFLANSSHVVDLAFYLGGEPKEICCYTAGGLIWHPTASVFSGAGVTEEGGLFSYHANWEAPGRWGIEMMTKQHRLILRPLEALYAQKPGAFNIEEIKLDDELDHLFKPGLFRQVRAFLKGECTELVTIEQHAKRTANLFSLIGKA
>NZ_CP048103.1|WP_040387272.1|2397863_2398802_+|class-I-SAM-dependent-methyltransferase
MGIRHLQGLAQLKRPARIFVIDPSRSSLKKAQAFFETLRNRRGHRVEFLQRLEDAPFHFDVTIVSTTARVRHSVIEQLLHQKRVRFLILEKFLFQKRDHFSSIGRLLEKENVPAWVNCPLRTMPFFKYLKEKIQGKGTLNFCVSGSNIGMATNSIHHLDVAAYLIDRYEWRLDGSMLDKEIQESKRNGFIEFTGTLSGGSTAGDHVRLTSYRTGQTPLRIQICTPKLRCLIDLNAKKAWLSEEETQWVWTETEFSIPLQSERTHLVTEQILVEGFSDLPTYADSCRVHLPLLQAFLSHLRTVQGGDETCPIT
>NZ_CP048103.1|WP_009709266.1|2396964_2397789_+|SDR-family-oxidoreductase
MKSNYKSLLDLTGKSVIVTGGLGILGRRFCTALAEFGANVAVIDLDTEAAQEFATQLSQTYQTDCIGIGCDVSSPIAVKRMVQKVIQHFGQIDILHNNAATKTDDLEAYFMPFEQYSLDQWRRVMAVNLDGMFLVAQQVGREMVKRGVGGSMIFTASIYGLVAPDHRIYRGAFYSGHAINTPAVYSASKAALYGLTKYLSTYWAKEGIRVNMLTLGGVESGQNEMFKRQYALRTPLARMGRADEMVSALIFLASEASSYVTGQNVVIDGGLSSW
>NZ_CP048103.1|WP_159439753.1|2396150_2396981_+|Gfo/Idh/MocA-family-oxidoreductase
MKKAGWQVIADYLSLQDPSEFGWDGVKVTHAWTQDINLTEQLCKTCFIPHPVHRLREMTDQVDAIIIARDDDESHYPLAWPFLEKGIPVFVDKPLSFNQKELSLLKPYLETGQLMSCSAMRYARELDLLRRQLPALGKIKLVQGTVVRSFEKYGIHLLEALFSLFPHTPISIFANEAHHQSFHMTLSDGSMWQLDALGHSFKTFHLQFWGTKKRIAVEITDHFTMFRRMLWRFIESVKSGKPVIPPQQTIDLMRLLISGAVSAREKRKVMIDEIQL
>NZ_CP048103.1|WP_009709268.1|2395266_2396064_+|SDR-family-oxidoreductase
MKSLEELFSLQGKSALITGGAGYLGKAISYTLAELGANLIIAGRDVQKSSAVCEEIMQQLNQSIQATAMELDVTDKTSIIRCFEKVSKSADGLDLLVNNAWSGNKNTLTSITDDDWNYDMEVSLNGVFRCVKQFLPLLKQKNGVILNIASMYGHVAPDYRLYEGTPFTNPPSYGAAKAGVIQLTKYLAGFLAPDGIRVNCISPGPFPHPSTQRQERFIQRLRQKNPLNRIGQPQEIKGTVALLCSDASSYITGQNICVDGGWSIW
>NZ_CP048103.1|WP_009709269.1|2394560_2395280_+|acylneuraminate-cytidylyltransferase-family-protein
MIGHDRVVAVIPARGGSKTIPYKNIKNLLGKPLIGWTIEAAKQVPAVDRIIVSTDDDCIAKAVKPYGIEVMERPAHLAQDDSLPIDVIVDLVSRLKKAGETALYLVYLEPTSPLRQPLDISQCLDLLADKTNGFQSVATFCEANLHPYRAWKIEPDSCYEFIADVNPWLPRQKLPKAYQLNGAVYALRIDQPPQPSQPFLPKPIGGIIMPKERSIDIDDSYEFLLAEWLLRRQLGYEKS
>NZ_CP048103.1|WP_076526459.1|2405689_2405953_-|CRISPR-associated-endonuclease-Cas2
MYVIITYDVGEKRVYKVCKKLREYLTWTQNSVFEGQIGKGKLTQCMHELDNIIHPQHDSIYLYQVNNQNHMKKTVFGREKGFDDLFL
>NZ_CP048103.1|WP_076526461.1|2406033_2407014_-|type-I-B-CRISPR-associated-endonuclease-Cas1
MSDHYIFSRGRLKRKHNTIYFESGEEGQKALPVERVDNLHIFGEVDLNSKLLNLLTKYDVRLHFYNYYGFYTGTYYPRTKNVSGFTVVQQSMHYLDPKKRYYMASAFVESGVHHMLRNLRRHKEKTGSYVDTIQAERVKIPDGRTIPELMGVEGRIRQTYYRSFNEILKSDFIFTKRSKQPPADPLNALISFGNSLMYTTVLAEVYKTALDPTVSFLHEPSSKRFSLSLDVAEIFKPLIVDPLIVSLVNNRVIGKKHFEDFEGIVLLNDQGKQRFIQEWEKKLATTVRHRTLKRKVSYRMFIRLECYKMIKHFIGDEPYRPLKAWW
>NZ_CP048103.1|WP_076526463.1|2407010_2407520_-|CRISPR-associated-protein-Cas4
MTTSISGVQVYYYSVCKRKLWLFSKGITFENEHDRVLEGKVLHERSYPYLERKEQLIDNTFKIDAVEGEYVREVKISSKMANADRMQVLYYLDQLRQRGVNKKGLISYTKERKTEEIELTPVEERKLKESLQKILDLLDQPIPPPFKRLPYCNQCAYHSFCYAREETEE
>NZ_CP048103.1|WP_076526490.1|2407567_2409805_-|CRISPR-associated-helicase/endonuclease-Cas3
MVVYAKSNPVETIREHTDRLLVEYERLRQAYGSQLNILSARDWELLKIMVDYHDAGKADGVFQNKICRYLGEEGSSVAHDRSVPHNYLSVGLIPFAHYNLSEDEKRLVILSVGYHHERKQQPEKAFIREVLETDLLPKRDAISRHMNLPLAERVSLEFVDYLERRYTPSDPSFFRYVMLKGLLHRLDHAASAHVPVEAGVKEHIGVYVNRFMQDRCFQKNELQIFAEGNRDRNVIAIAQTGMGKTEAALLWAGEDKVFFTLPLRVSINAIYNRITDAEGMAYPAAGLLHSTARDYLDENGGEFWEKLYDQSRQLSNKLLLTTIDQILKFPFYYRGFEKELAAMAGAKVVIDEIQAYDPDIAAMLIKSLEMIHRVGGRFMVMTATMPTLYMEELGASDVIELDSVVQGEFVDPGLTRHRIQLRDGAVEDHLAEIAERGRDRQVLVIVNTVRRAVQLYEEIGKMAGDSVYLLHSRFTREDRQLLERAIQHFNKKEKRPGIWITTQLVEASVDIDFDELHTELSVLDSFFQRLGRCYRKRKLNHDQPNVYVYTDLNHISGIGTNNVYDRSLVEKGLALLEKYDGLILDETSKVEMVRKLYDRNYLEGTDFLERFDEAMDFFDNMDPYKLTEKEAQQKLRKIQNLTVIPRSLFDEWVDRLEVYKTALRSEKQSIRREIERKTISIPRSMFFGKDEVGDPLSKRLLHRVVDDPRDPLSDVWVLDAHYDFDRETLQGKGISFQIEEQDLFT
>NZ_CP048103.1|WP_076526465.1|2409886_2410585_-|type-I-B-CRISPR-associated-protein-Cas5
MKVLRLRLFQETACYKKPLAFKVGETYPLPPYATVKGWAHALLGADRFIPMRISVQGCYEAKMMDYQTHYLFKKRDVDEFPLVLDGLGHKTYSYQNMTKMPLYIHLLYRVKLLMHIGAEEDVLQRLQERIEHAEEHFSLGRWEDLARVDECRLTEVRQLEDEKMLPMNAYVPRRLVTHKRHVPYLLNWKYDIHNGVRRWEKIPVGYVLAGLSLTPGQALVDDADDPVIFHDQ
>NZ_CP048103.1|WP_076526467.1|2410581_2411481_-|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MGKALSFTGVFQANSLNYGEGIANISELKKFHRANGEVYTFASRQSLRYDIVRLGNQLYGWNRETVDKASGVIQFKKDVTIKDSVEMDLFGYLKTAKQSQKRPAVARLSHAISLEPYRSDMDFLNNMGLAERIGETPNLANIEQHESLYTYTLTLDLDRVGVDPNGEVELAAETKATRVRQLLNIMKILNREIRGRQENLAPLFVIGGVYDVANPFFLGKVKLNQDVKGFALDLKPIQSTMEQTFAGSSVSEQTRIGLISGIFDNEAAFRDAFGESVDSVESFFRRLAEDVSDHYGVHL
>NZ_CP048103.1|WP_143457196.1|2411473_2413138_-|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MARREEERLDNMLQGLSKSNVTKETFGTGLKNIRDTVKKSADKVVKYYGDPPWGDEVKSIQEALKEIKQAEQLEELQQLTDQYLKVLAEPLINRKLTVNYFKTAVMQPFFGQPSFLQATANSLSYEEHIDRFQQDYILPVLLEAKMRTIVEQASTSNEVLAFLDEYQDYSPFKAIKRKVKKRNLGEIRAFFEQEMSHCTLIEGQLATINFEEMMFSPLGVSQNKALNFNWNLAKDETIPISSLAKLILFCAPAGAAVYLRKDGFGEQGEYRTYMGFVQSDSPLPDVIRKNRYFQIAKQGMEPFDRVVSRMIEDVKQKAGFVADHLLFIEFSSEYRAKKTLLDYYHLPRYLAEYLSHHADELDHIRPWEYREQFIRHVLKGEDPRHMITRLLRQNVESGYSGWSAYVATRERYRMRQYAKHLGEGGSAMDAKEKRVRAVYRVYRSGADIREKFNQRGPREGAPEGQYAASGAKKISGIAYRLLNAANANNRKSFMDTVMRLHMSVDKPVPVFFLDALHERELDFHTVANAFVAGLLSEKYEVAKEQNGEGVTVDG
>NZ_CP048103.1|WP_076526470.1|2413376_2414129_-|CRISPR-associated-endoribonuclease-Cas6
MRLFCAFKTGKLPIDYRMGIVSIIKESLKRSDPAYYRFWYEGSPPKMKPFTFSPYLKNFNPLGEEIALEELHVTFSSPDHEFLLHLYNGLHDISDLDYRGYGLVKNRLRMLPEQTIQTPVVVFKTRSPILVEDATGRPLKPEDNDYERELAYMADLALSNYRGYGLQDEFHMQPLNMKKRVLKESNREFRDQKEGYLYFTTFQGTLALKGHPQDLQLLYQLGLGHRRGFGLGCVDVVQQIHEFPGNTLLG
>NZ_CP048103.1|WP_076526472.1|2414454_2415801_-|cytosine-permease
MEDTKPLSGGKDEALAAIPENKRQHWLTPAMIFGGLEFTIPVLMVGATLAGSFGLSELFWVLLISLFVIQWIGNAISGYMGAKTGRSSSVIARTSFGAAQARFIVGLTIFVVSLGWWALQTAVTGNAISAMLGIDYENQFWPWAIVTIVAGLAFALPSIIGYNSMKWTDYIAVPAGLLLVAGGIYYALKNTGWDTIMDWNPEPQITFLAALSLVIGINVSQWVIASDYTRYAKPKVKDNVLIPLGIIAVGFPLFYVGAIMSVGVGDADIVNVMMNLGFPVWGFLILWIATWTSQLVNNYSMGLALANLCNVNSNRGRALLTLGGTLLAIVIALAGILDYFMDFLYMTALVYPAIAGVMMADFFFIRRRQWKDLPGWNWMATIGLVVGTFVGYLTQYVNTLGIPAVQSLIASGMVYLVAMQLKARVKPDHFTEDIGKEEAVASEQAETV
>NZ_CP048103.1|WP_076526473.1|2415828_2416158_-|cupin-domain-containing-protein
MDVLKLADLQEEGNESYSMKTAFQEAVGDSSVKVGRVVIRAGETVPLTGVSKHRENEYSIILKGSLVTDIGDEKIRVTAGDATFIPKGEEHVATNDGEEDCELVFVLVG

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Crispr_ID: NZ_CP048103_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_15

2996636-2996713

Orphan

Consensus_repeat	Method
CTGGTGAGTGCATAGCGAGACCAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_15

>merge|NZ_CP048103|15|2996636-2996713|CRISPRCasFinder
CTGGTGAGTGCATAGCGAGACCAGGGGCGGAAGCCCCCTGGCGAGACTTGTACTGGTGAGTGCATAGCGTGACCAGGG

>NZ_CP048103|15|15|2996636-2996713|CRISPRCasFinder
CTGGTGAGTGCATAGCGAGACCAGGG	GCGGAAGCCCCCTGGCGAGACTTGTA
CTGGTGAGTGCATAGCGTGACCAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076525486.1\|2988447_2989137_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP048103.1\|WP_009709960.1\|2992907_2993366_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP048103.1\|WP_076525464.1\|3005471_3007199_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP048103.1\|WP_076525473.1\|2999525_3000470_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_CP048103.1\|WP_076525480.1\|2996150_2996405_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076525476.1\|2998582_2999536_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226965
NZ_CP048103.1\|WP_076525483.1\|2990296_2991559_+\|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl\|CDD\|367829
NZ_CP048103.1\|WP_009709970.1\|3000466_3001225_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226963
NZ_CP048103.1\|WP_084190136.1\|2985444_2986326_-\|polyamine-aminopropyltransferase	unknown	unknown	gnl\|CDD\|234843
NZ_CP048103.1\|WP_076525488.1\|2987413_2988190_+\|YheC/YheD-family-protein	unknown	unknown	gnl\|CDD\|373047
NZ_CP048103.1\|WP_172998929.1\|3002431_3002761_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|270357
NZ_CP048103.1\|WP_076525485.1\|2989133_2990219_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|182539
NZ_CP048103.1\|WP_076525471.1\|3001309_3002242_+\|siderophore-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966
NZ_CP048103.1\|WP_159439713.1\|2986631_2987249_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP048103.1\|WP_076525481.1\|2994225_2995713_+\|alkaline-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|224441
NZ_CP048103.1\|WP_009709959.1\|2992132_2992552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_172998930.1\|3002732_3004139_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226644
NZ_CP048103.1\|WP_143457128.1\|2998165_2998519_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182059
NZ_CP048103.1\|WP_052529014.1\|2996966_2998007_-\|permease	unknown	unknown	gnl\|CDD\|223773
NZ_CP048103.1\|WP_076525466.1\|3004986_3005496_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224759

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076525486.1\|2988447_2989137_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.58389e-84
NZ_CP048103.1\|WP_009709960.1\|2992907_2993366_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.65661e-23
NZ_CP048103.1\|WP_076525464.1\|3005471_3007199_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.52331e-174
NZ_CP048103.1\|WP_076525473.1\|2999525_3000470_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.45479e-128
NZ_CP048103.1\|WP_076525466.1\|3004986_3005496_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|224759	COG1846, MarR, Transcriptional regulators [Transcription].	2.19956e-17
NZ_CP048103.1\|WP_076525476.1\|2998582_2999536_+\|ABC-transporter-permease	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.4682e-149
NZ_CP048103.1\|WP_076525483.1\|2990296_2991559_+\|cell-wall-binding-repeat-containing-protein	gnl\|CDD\|367829	pfam04122, CW_binding_2, Putative cell wall binding repeat 2. This repeat is found in multiple tandem copies in proteins including amidase enhancers and adhesins.	0.000395214
NZ_CP048103.1\|WP_009709970.1\|3000466_3001225_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	3.73144e-153
NZ_CP048103.1\|WP_084190136.1\|2985444_2986326_-\|polyamine-aminopropyltransferase	gnl\|CDD\|234843	PRK00811, PRK00811, polyamine aminopropyltransferase.	3.2032e-129
NZ_CP048103.1\|WP_076525488.1\|2987413_2988190_+\|YheC/YheD-family-protein	gnl\|CDD\|373047	pfam14398, ATPgrasp_YheCD, YheC/D like ATP-grasp. A member of the ATP-grasp fold predicted to be involved in the modification/biosynthesis of spore-wall and capsular proteins.	1.53863e-56
NZ_CP048103.1\|WP_172998929.1\|3002431_3002761_-\|hypothetical-protein	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.6747e-51
NZ_CP048103.1\|WP_076525485.1\|2989133_2990219_+\|HAMP-domain-containing-protein	gnl\|CDD\|182539	PRK10549, PRK10549, two-component system sensor histidine kinase BaeS.	3.90963e-67
NZ_CP048103.1\|WP_076525471.1\|3001309_3002242_+\|siderophore-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	2.2501e-146
NZ_CP048103.1\|WP_159439713.1\|2986631_2987249_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	6.64976e-60
NZ_CP048103.1\|WP_143457128.1\|2998165_2998519_+\|hypothetical-protein	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	3.24988e-05
NZ_CP048103.1\|WP_172998930.1\|3002732_3004139_-\|ABC-transporter-permease-subunit	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	1.2143e-139
NZ_CP048103.1\|WP_076525481.1\|2994225_2995713_+\|alkaline-phosphatase-family-protein	gnl\|CDD\|224441	COG1524, COG1524, Uncharacterized proteins of the AP superfamily [General function prediction only].	2.11631e-13
NZ_CP048103.1\|WP_052529014.1\|2996966_2998007_-\|permease	gnl\|CDD\|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	1.87496e-37

>NZ_CP048103.1|WP_076525480.1|2996150_2996405_+|hypothetical-protein
MSEELLKQIVDRLDRMEKRFDSMEDRFDSVETGLKEVKDNMATKEDVADLRQAVLETREDVKGIQEGRTFLAGDVYFLKKRKNG
>NZ_CP048103.1|WP_076525481.1|2994225_2995713_+|alkaline-phosphatase-family-protein
MKTAPSKNVLFLVVDSLMSHAIDQGIKEGRLPALSFLIQHGQYHKELVSSFPTMSITIDSTLLTGTYTDRHRVPGLIWYDRDEGRVINYGTGFREIIRDGINRTLQDLVSHLNQKHLNPETPTLYEELARLGIRSGSINGMVYRGNTDHELRFPIWLAGLTSLPRKLKVKGPDFLAYGAFSSPLKGLPDSIINDLGFSDKYPLAVTRFLVKENRLPAFLYVYFSDMDKPIHKKGPSYMGGLYKFDRELQSLLDSFGSWEQALEKVTWIICGDSGQTATLPPEKDPVIPLHKLLKGYQRLQPGKKTTPDTELVLCVNARMAYIYALKPTVRIPDLVTDLKEEPRIDLLSWREEEWIHVLHVGRNKQLKYRPGKTWTDPYNQNWEIQGEMEALGITADPRGKRLAFGEYPDPLSRLAGAHFSHSGRFLVVTAGPGYELVADHSPTHQGGGGHGSLHQTDSLVPLIITGTNLRPNHSRMVDLKAFLINLLTEHTSPGQ
>NZ_CP048103.1|WP_009709960.1|2992907_2993366_-|helix-turn-helix-transcriptional-regulator
MKREENKSHCPINFTVEIFGDTWSLLIIRDMIALGKKTFGEFLESEERIGPSVLADRLAYLERKGIITKKPSETDKRKFIYSLTEKGLDVIPIVYEIALWGSKHSLHPVAPDAWFKAMQYDKEKVLKAYREAVASGSSFMNGPNSVVKKLDL
>NZ_CP048103.1|WP_009709959.1|2992132_2992552_+|hypothetical-protein
MKTKPFALGCVFMLVLSLFSASVNVATASEVSTSEYLRETVTFKETVDTPAFTHDEKRGNLQLDTYATYSAGTADFDYFVVTLYEAGSNVEMGNKVAVRADGLDIAAWDVPSGKYYFRFEKPRNGLDLKVKYSVYPYNG
>NZ_CP048103.1|WP_076525483.1|2990296_2991559_+|cell-wall-binding-repeat-containing-protein
MRKRTIMAISSLLTLILIFTGCSIAGNNGNKDHENMNHDDMKKGGSPDTGDMSIMDQKINKSGNQKRLSMDTKNITRISQDDPVNVAVETSQLIWPASHEGNRPGTILLGIENDWQTNLPAVTLVHHPNDGPLLYAEKNSIPKVTMDELKRLNPKGSEKNQGIQVLLTGDFSDDVRKQLVDEGMKVDTVKGKNPADTAANVDAYYAKASGDLPQSVIVGSMDAPEYTLPAANWIAHMPEPLLYVRKDDVPKETIDALKKRKDKANIYILGPESAVSASVEKKLKQYGKVKRISGRTPEENTIAFAKFKDKSTKFGWGVTNPGHGLTFNRTDHVESAIVSAPFSHMGKHAPMLLLDQDKLSEPMHHYLMSLQPKFKDDPTVGPYNHAFMIGSEKMIPFTTQGMIDQILEITPESGDGHGGH
>NZ_CP048103.1|WP_076525485.1|2989133_2990219_+|HAMP-domain-containing-protein
MSQKLQFRLTVAFIGVAAGVVLVATTAFILETHYHFSIYQRQFPNTDSVQGLTYHFEQALIQAILWTALGAVFLAIVLSWLVARRITTPLVIMRKGAEAITKGNLQTRVPVHGKDELAELGQALNHLTEELERQEHLRRQMTSDVAHELRTPLTTLKSHMEAFEDGIWQPTPGRLRAVTDEIDRLTGLVGDMEQLTLLDSPEFELEQKKEDLSVIVDQTLTNMRATFDQKGIALKSESVGPVHAWVDRRRIAQVLVNLLSNCLKFTSKGGEVTVRTEQKGKEAILTVRDTGEGIPQEELQRVFERFYRVDRSRNRQSGGSGIGLTIVKKLVESHSGAIQIESKPGMGTCIYIHLPNQNNLQ
>NZ_CP048103.1|WP_076525486.1|2988447_2989137_+|response-regulator-transcription-factor
MKNILIVDDEKKIREVLSSYLVHAGYNTLEAGTGRKALDIHRETTVDLIILDLMLPDLTGEEVCREIRRQSAVPILMLTAKVEERHRLEGLAIGADDYVIKPFSPREVVARVQAILRRSADDLLAERISFHDGDLIVDTRTKTVCKAGQPVHLTPIEYRLIQALARNPGRPFSREELVEKLFGFDYSGGERTIDQHVKNLRNKVESDPKNPTYFKTVFGLGYRFEGGES
>NZ_CP048103.1|WP_076525488.1|2987413_2988190_+|YheC/YheD-family-protein
MAWVGYKWGMYKIFKRDPVLASALPETRLWSQTNLWSMLDLYGTVILKPSAGSRGSGIIQVTQKAKEHFEIHWLSQKRLVTGKKAAYAMLQKLTHPSYLIQQRIPLAEIGERPMDIRVIVQRRNKNAPWTVTGCVAKVAGKGYIVTNVTRSQGSVLPVRQAIAKSTAKQVPTEKVIKHLMDCSLLATKRLSVYSPQCTVLGYDMGVDHRGKVWIIEVNGKPILSHFLKLKDKSMYRKIISYGYNPNSPKRSSELSPLI
>NZ_CP048103.1|WP_159439713.1|2986631_2987249_+|trypsin-like-peptidase-domain-containing-protein
MVAISAEEDNRPASRSLFNRLFNDFTPSDQEEQDTRRQYGSGFVISPRGYILTNEHVVRRASRLLVHFFGRKGPLPARVVWRDTHHDLAVIQVRSSTPLKPLAMGSSRHTEVGEWAIAIGNPLGLHHSVTLGVVSGKDRPLNLRERRFGHVIQTDAAINPGNSGGPLLNILGQAIGVNTLVVYPSQAISFAIPIDVVKPLVRDFM
>NZ_CP048103.1|WP_084190136.1|2985444_2986326_-|polyamine-aminopropyltransferase
MDDKKMTGSGFFVAEDGTQWLSDPEERFGFRANWKINRFLHRERSDFQDVAVVETEGFGKTLVLDEIVQTTETDGFIYNEMITHIPLVTHPSPREVCIIGGGDCGAAREAVKYPSVKRVDLVEIDRKVVEVSRKYLPEVAGVGELDPRIHLHYEDGTAFIRERESLYDVVVVDSSDPVGPAAVLFELPFYRDVHRALKTDGLMVCQSESPIFHPEVLSRVHQTLRQLFPVVRTYLATVPTYPGGVWSFTLASKTYDPLREGSGRLQTTGNRYVDADVLEGSFRLPVYVKKLLG
>NZ_CP048103.1|WP_052529014.1|2996966_2998007_-|permease
MWQRKKWIGFAVFLLIAAVGLYLVKWAPYYEKAIKAMAEHSIGPSIISGESATVPAPSWNAALSYSIDYFQAIWQAMIVGIVLGSLIQVLVPKDWLVRWLGRGTFKSTMVGGLCGMPSMMCTCCAAPVVVGMRKSQSSIGAAIAYWMSNTALNPAVLVFMAFILSWKFVLLRVLLGLVLVFGVSHLLNRLAPEKGVEMEKIIPPSREQTLPQTPFIHRWWKQLKGLTLAIVPAYIITVFILGGVRAWLFPAIDPDWGNSPLAIIGFALAGMLFVIPTAGEIPIAQTLMAAGLGAGPAAALIFTLPVISLPSAIMVSRALPWRVIAALAGMILLLGILGGFVATAWF
>NZ_CP048103.1|WP_143457128.1|2998165_2998519_+|hypothetical-protein
MVAIISVIFQHTYSLLPASPSPIGRFFFDCENNKTAERFAAPLASVFPNQTWTPEWNRYFPDPTGTKWTVVGTNPTPAQKPDPSPDPYSTPQVTPILPWPPYFHPKTLLTNLYNMLK
>NZ_CP048103.1|WP_076525476.1|2998582_2999536_+|ABC-transporter-permease
MKLRYLLIALLVLSVISIFVGVQELTPLDLFHLGDHQTLILLSSRLPRLISIIIAGSSISICGLIMQQLSRNKFVSPTTAGTMDAARLGVLVSLLVFTSASPLTKMLVAFAFALGGTLLFMQILDRIKMKDTIFIPLVGLMFGNIISSIATFIAYKYDLIQNMSSWLHGDFSMIVSGQFELIYISIPLLILAYFFADKFTIAGMGEEFAKNLGLNYQQIVRIGLAIVAMVTACVVLTVGMIPFLGLIIPNIVSLYQGDHLKKSLSHTAALGAVFVLFCDILGRIVIYPYEISISLTVGIIGSGIFIYLLLRRRAYDT
>NZ_CP048103.1|WP_076525473.1|2999525_3000470_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTPKAKIILLAAASAVVVTIYLFLDLGGSWDYAFPRRIAKVLAIILTGGAIALSTTVFQTITNNRILTPGIMGLDSLYLLIQTIVIFLVGSTTLTMMNNHIHFLMTVGIMVLFSGVLYKVMFQGGRNVYFLLLIGIIFGTLFQSLSSFMQILIDPNEFQIVQDKMFASFNNINTELLWIAGALILAVTLYFLRFAKYLDVLSLGRDQAVNLGVDYDYVVKQFLIIIAVLVSISTALVGPITFLGLLVVNVTYEFMKTYRHRYLLTGSLLISIITLVGGQLIVEKVFTFSTTLSVIINFVGGVYFIYLLLKESRT
>NZ_CP048103.1|WP_009709970.1|3000466_3001225_+|ABC-transporter-ATP-binding-protein
MIRVSHLFKKYGRKHVIEDVSVQIEKGKITSFIGPNGAGKSTLLSMISRLIAKDAGVITIDDQDLTKSKNRDLAKKISILKQSNFTTLRLTVRELVSFGRFPYSQGHLTETDWKHVDEAIRYLNLEDIQHQYLDQLSGGQQQRAYIAMVVAQDTEYILLDEPLNNLDMKHAVQIMKILRRLVDELGKTVVIVIHDINFASCYSDHIVALKDGKVVREGAPHEMIHSSVLKEIYNMDFNVEHFSNHRICLYYT
>NZ_CP048103.1|WP_076525471.1|3001309_3002242_+|siderophore-ABC-transporter-substrate-binding-protein
MRKMMFFILAAAFALVVAGCGQDNASPAAGKQDTLTVKHELGETKVKKKPEKVVVFDFGVLDTLDQWGVKVTGLPQDNLPKYLSKFKGDKYENVGSLKEPDFEKIHAAQPDLIIISGRQADMYDQFKEIAPTIYMGVDTSRYMDSFRENVNQLAKIFDKESEAKKELEAIDKDIDKLKEKANDAGKNALIILANDGKVSAYGTGSRFGLIHDVFGIKPVDKNIKASTHGQSVSFEYIVKKDPDYLFVVDRGAVVGGQSSAKQVVENDLVKGTKAYKEKHIIYLDPDYWYLSGGGLVSLNEMVKQVDQALK
>NZ_CP048103.1|WP_172998929.1|3002431_3002761_-|hypothetical-protein
MASTLAKAVKEKKPIVVTGWQPHWKFARFQLKFLDDPKKEFGQSEEIHTIVSKDLKEKNPEAYQIMDRFHWTPGDMEEVMLMIQEGKEPEQAAAAWVEKNKDKVKKWTQ
>NZ_CP048103.1|WP_172998930.1|3002732_3004139_-|ABC-transporter-permease-subunit
MSLPKIPLDQWVDRVVDWLQVNLAPLFAIITALIEPMVGFFQSVLTAAPPVITALVLAVLVYLASRFSIALLTFLGCLLIDNLGYWDASVETIALVLTATLLSIVIGLPLGILTARNRSSQSLITPVLDFMQTMPAFVYLIPAVFFFALGAVPGIIASIIFSMPPTIRLTSLGIRQVSADLIEAADAFGSTSTQKLFKVQLPLAKPTIMAGINQTIMLSLSMVVIASMIGAGGLGTVVLQAITRLEVGRGFEGGLCIVIIAIVLDRVTQSLGQGRQKVKSHKGKGSRRGWLLLAILLIASVGVTTLFTSQDTGKERVTLTYVNWDSEVASTHVLKKVLEDLGFQVKLQEVDVGPMFAGVASGDADGTVAAWLPVQHRNYMEKYKGQVEDLGPNLKGTRLGLVVPRYVKANSVYDLKKDAAQFDHQIIGIEAGANMNKQTEKLIKDYDLDMELVEEFQCGHGLNPRQGG
>NZ_CP048103.1|WP_076525466.1|3004986_3005496_+|MarR-family-transcriptional-regulator
METKLSPTARMLLKSWMQLKKMDLHPQSIAGYKPSEGRLLFCIKYGKKPDSPGPTVTDLSKLLHVTSPTVTQLINELAGKGLVQRNVDPKDRRVVRITLTETGEQIIQKLGDSLAASLKGLIEYLGEGESRQLAELLSKVAVYLQERNTNPNQSLLRGEDEGCSDCSDF
>NZ_CP048103.1|WP_076525464.1|3005471_3007199_+|ABC-transporter-ATP-binding-protein
MLRLFRFLKPFRMTVLLVLVLTFFQVLSELYLPTLMADIVDLGIVQADIPYILKIGGLMLLVTAGGALCSVIAGFLSSKVASGFGKDLRSRIFTHVESFSLREFDQIGTASLITRTTNDITQIQQVLMMMLRMAVMAPMMCIGGVIMALSRDARLSWVIVAIIPILAGAIFTIARKGLPLFKAMQTKLDKLNRVTRENLTGIRVIRSFNRVGHEKKRFDFANRDLMDTGIRVNRLMAAMMPTMMLVLNFSTIAIVWFGGIRIDHGNMQVGDLMAFIQYAMQIMFSLIMLSVIFVMIPRASVSANRVREVLDLVPEITDAPQVREADGMKGTVEFRDVTFSYPGAEKPALSHISFRANPGEVTAIIGGTGSGKSTLIHLIPRFHDVDSGSVRVDGVDVREMSQETLRAKIGLVPQKAVLFTGTVAENIRYGKESATDEEIRHAAEIAQAAPFIAEMKDGYQSLISQGGTNVSGGQKQRLSIARALVRRPEIYIFDDSFSALDFKTDANLRRALKQETADSTLLIVAQRVSTVMDADRIIVLDEGKIAGIGTHHELMKTCDVYREIVSSQLSEEEIA

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Crispr_ID: NZ_CP048103_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_16

3145467-3145543

TypeV

Consensus_repeat	Method
GACTTGTGCTGGTGAGTGCATAGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_16

>merge|NZ_CP048103|16|3145467-3145543|CRISPRCasFinder
GACTTGTGCTGGTGAGTGCATAGCGAGACCGGGGGCGAAAGACCCCTGGTGAGACTTGTACTGGTGAGTGCATAGCG

>NZ_CP048103|16|16|3145467-3145543|CRISPRCasFinder
GACTTGTGCTGGTGAGTGCATAGCG	AGACCGGGGGCGAAAGACCCCTGGTGA
GACTTGTACTGGTGAGTGCATAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_076526176.1\|3136957_3137290_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP048103.1\|WP_143457174.1\|3146181_3146718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526221.1\|3144511_3145117_-\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|378961
NZ_CP048103.1\|WP_076526166.1\|3142871_3143708_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|275313
NZ_CP048103.1\|WP_172998934.1\|3142065_3142875_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|275314
NZ_CP048103.1\|WP_076526168.1\|3140707_3141049_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_040387442.1\|3149895_3150192_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526164.1\|3143704_3144472_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP048103.1\|WP_076526158.1\|3150257_3151691_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_CP048103.1\|WP_040387443.1\|3153157_3153448_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	unknown	unknown	gnl\|CDD\|178810
NZ_CP048103.1\|WP_076526156.1\|3151687_3153145_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	unknown	unknown	gnl\|CDD\|234572
NZ_CP048103.1\|WP_076526160.1\|3149464_3149773_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372724
NZ_CP048103.1\|WP_076526173.1\|3137742_3138666_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP048103.1\|WP_159439734.1\|3145622_3145958_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP048103.1\|WP_084190198.1\|3146793_3148251_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200458
NZ_CP048103.1\|WP_040388166.1\|3141245_3141557_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526170.1\|3139219_3140617_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP048103.1\|WP_076526153.1\|3153770_3154190_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP048103.1\|WP_076526151.1\|3154290_3155532_-\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238868
NZ_CP048103.1\|WP_159439735.1\|3136615_3136780_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_076526176.1\|3136957_3137290_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.45546e-10
NZ_CP048103.1\|WP_076526221.1\|3144511_3145117_-\|ECF-transporter-S-component	gnl\|CDD\|378961	pfam12822, ECF_trnsprt, ECF transporter, substrate-specific component. Energy-coupling factor (ECF) transporters consist of a substrate-specific component (known as the S component), and an energy-coupling module. The substrate-binding component is a small integral membrane protein which captures specific substrates and forms an active transporter in the presence of the energy-coupling AT module.	0.000827264
NZ_CP048103.1\|WP_076526166.1\|3142871_3143708_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|275313	TIGR04520, ECF_ATPase_1, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the upstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	1.44334e-96
NZ_CP048103.1\|WP_172998934.1\|3142065_3142875_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|275314	TIGR04521, ECF_ATPase_2, energy-coupling factor transporter ATPase. Members of this family are ATP-binding cassette (ABC) proteins by homology, but belong to energy coupling factor (ECF) transport systems. The architecture in general is two ATPase subunits (or a double-length fusion protein), a T component, and a substrate capture (S) component that is highly variable, and may be interchangeable in genomes with only one T component. This model identifies many but not examples of the downstream member of the pair of ECF ATPases in Firmicutes and Mollicutes. [Transport and binding proteins, Unknown substrate].	2.19014e-75
NZ_CP048103.1\|WP_076526164.1\|3143704_3144472_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	3.34806e-26
NZ_CP048103.1\|WP_159439734.1\|3145622_3145958_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	4.43442e-29
NZ_CP048103.1\|WP_040387443.1\|3153157_3153448_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC	gnl\|CDD\|178810	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC.	5.90299e-40
NZ_CP048103.1\|WP_076526156.1\|3151687_3153145_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA	gnl\|CDD\|234572	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA.	0
NZ_CP048103.1\|WP_076526160.1\|3149464_3149773_-\|hypothetical-protein	gnl\|CDD\|372724	pfam13779, DUF4175, Domain of unknown function (DUF4175).	0.00822353
NZ_CP048103.1\|WP_076526173.1\|3137742_3138666_+\|DMT-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	4.36775e-19
NZ_CP048103.1\|WP_076526158.1\|3150257_3151691_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_CP048103.1\|WP_084190198.1\|3146793_3148251_-\|alpha-amylase	gnl\|CDD\|200458	cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes eukaryotic alpha-amylases including proteins from fungi, sponges, and protozoans. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	7.64238e-145
NZ_CP048103.1\|WP_076526151.1\|3154290_3155532_-\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238868	cd01830, XynE_like, SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	1.4715e-94
NZ_CP048103.1\|WP_076526170.1\|3139219_3140617_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	0

>NZ_CP048103.1|WP_076526221.1|3144511_3145117_-|ECF-transporter-S-component
MEKRSMWSFRFSTASLVLIPAAVGINYIGKLFAGVLKLPLWLDAIGTILASMLAGPVIGAISGAVNNIIYGLTMDPISFVYGITSLFIGLIAGVMTHKGWIQSWGKAVIVGLAVGLTAVVISTPLNVAFWGGQTGNLWGDAVFAAVMAKTSSIWLASFLDEIIVDLPDKVLVVLAAYAIYRGLPDNVRQMFHRNSQVEELD
>NZ_CP048103.1|WP_076526164.1|3143704_3144472_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MKSISLYVDRDSILHRIDPVNKMIYILAAIALPILVPTLYTALICMLLSLLLLRIGKVFQKSLPVYGFVFLILITVILIQGLFHPANETPLFSLGPVTYYREGFLFALLITFRVINIVGSFLILVLTTKPSDLVESLVRRGLSPRFGYVLGSVFQIVPQMMSTMKTITDAQRSRGMETEGSLFVRIKAFLPLIGPVVLSSLIHVKERAMALEVRGFNAKGEKTFLHEEKAYVATRPIQWGLWIVMVTAAVWRIFL
>NZ_CP048103.1|WP_076526166.1|3142871_3143708_-|ATP-binding-cassette-domain-containing-protein
MKKIVVEGLKYRYPGARELALKDVSFEVKTGEFIGIIGRNLSGKSTLCQALVGLVPHFYHGAYGGKVIVDGIEAKTHTISEMSRKVGIVFQNPFTQVTGSKLSVLEEVAFGLENMGVPRREMMERIDHALQLMGLEEYKDRNPFDLSGGQMQRMAIAGIIAMKPQVIVLDEPTSQLDPQGSEEVFQAVQSLSRAGMTVILTEHKPEKIARFADKVLLLDDGRVVDFAAPAQVFSREDLAEYGVEAPIYTKVCRQLNLRREDSGLFPVTLEEAREVLKT
>NZ_CP048103.1|WP_172998934.1|3142065_3142875_-|ATP-binding-cassette-domain-containing-protein
MTMIRVENLAFSYRKDAPVLQEITLNFDQRPTAIIGRNGAGKTTFVKLLKGLLKPDRGGITVGDTDVRTATAASLARQVGLVFQNPDDQIFKGNVLEEVLFGPLNIGQDPETARQNAMDALEMVGLEQRLEVNPQDLSLSEKKMVCIAAVVAMDTDIVIMDEPTIAQDPEGKERIRQIIGTLTGRGKGVLTIIHDMDFVAECFERTIILNRGRVLLDGDTRDIFSRPDLLRQAHLEPPAVARLGAELGLSDTFLTVEELVTALRQTRES
>NZ_CP048103.1|WP_040388166.1|3141245_3141557_-|hypothetical-protein
MSAARIMKWVSGGFEALLGIPVLGGLLVIASGYYALVVMLLLHIATLVVSASGGAPKHGSILGIVTSCVAWIPFVGMIMHIITAVILMVDAAKKEKTVIDVAS
>NZ_CP048103.1|WP_076526168.1|3140707_3141049_-|hypothetical-protein
MNVPFPGILVGDQLAAQVVGNTSVENLSGMVGTRWINKKTLQMKEPLIGRRPTRLGTIQQSEEEVIHPNILKQLRQGQAVVIKKVPELTVDKTLIRLAAEDILSMLYEAKGNH
>NZ_CP048103.1|WP_076526170.1|3139219_3140617_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MPKPKPPVQPGERITLPITGQSHTGDGVGKYKGFTVFVPLAIAGEQVAARVSRVKKTYAHARLEEVIQVSPHRVDPLCPVFAQCGGCQLQHIAYPAQLESKRRQVVNAFARIGGLEEVTILPVLGMEEPWSYRNKAQVPVGGGKGKVEAGFYAAGSHQIIPFDRCLIQQPENDRTIQQVKEWIRELDIPPYDEKKHRGCLRHVMVRTGIHTQEVMVVLVTNGPELPHRKQLVAGLRERVPGLTSLIQNIQPHRTNVVLGKESRVLWGEPVIHDRIGHVRFAISPHSFFQVNPVQTEVLYEQVRRMAALTGEETVIDAYCGIGTIGLYLAKEAARVLGVESIPQAVEDARHNAELNGIDHASFKAGPAEEVMPRWAREGIRPDVIIVDPPRKGCAPELLDAAVRMSPDRLVYVSCNPATLARDAAYLKERGYTNRQVQPVDMFPHTSHVECVTVFRREWGDGEAGE
>NZ_CP048103.1|WP_076526173.1|3137742_3138666_+|DMT-family-transporter
MSKDRMIAYIQMGSAMAIVGSLVTASKMTVDRIPPHLASELRFIVAAAVLILLLYQREGGFHFRRNRPHLSLLFWQAFFGTYLFNLCLMYGVRWTTGVESGIITSFTPAAVGLLSFLLLRERPGWIRWVGILFVVLGTGVIQVPGAAGGDGQGTMSLWGNLLVLAAVISEGFFITLGKKSTNHVSPLYVSTLVSLYGVLLFLPGTLEELRHFDWAAVPWEGWALILYNALIVTVVGFLLMYAGVSRLPASSAGLMTGLMPVSAVLLSALLLGEPVTWIHGLGILAVLTGIALISQEKEPEPMTANKP
>NZ_CP048103.1|WP_076526176.1|3136957_3137290_+|helix-turn-helix-transcriptional-regulator
MDWLRRIRNFHRLTQREVAERVGISTASYSSIERGRIPSVPVAKAIAEELGFDWMKFYDGIEERIVDDLYIPPKRQYQKEAPRQEDSDWWLIQMEEDIIASRRLGHRKRK
>NZ_CP048103.1|WP_159439735.1|3136615_3136780_+|hypothetical-protein
MREFFLQVLREGWALVKLVIPVIVAHHLQKTQENTKKPGSHGRYRRNRAKRHKR
>NZ_CP048103.1|WP_159439734.1|3145622_3145958_-|nucleoside-deaminase
MIATGVNETGKIQDPTAHAEIQAIREACRKLGKTVLDDCEMFASGEPCSMCMGAIQWAGFRAVWFAAAMEESERLGLKPAKGVDMIPVQKLEMNDREKHPFRLWERLQQQE
>NZ_CP048103.1|WP_143457174.1|3146181_3146718_+|hypothetical-protein
MNSSQRESGEQNLSQPEQPEPKKQGEESGPRPERMEAVKKALEQSLFAESILLTISGQIASIPEMKGQPGLASVSGEEAWTGSLRLTAKGCLERMTGQDWHETVLSQLVHSMYEARRRDRLKRGYLMELKRNAPEDARPAVENWIHWVDYAELSLQEAMVHARELIGSHSWDHFAPQK
>NZ_CP048103.1|WP_084190198.1|3146793_3148251_-|alpha-amylase
MGPIRRKRAKSAVILLTLVLLWVVVKPPVHGMSATEWEKRSIYFIMTDRFSNGDPANDNYGGFVSDKNDPRKYHGGDFQGIINRLDYIKNMGFTAIWITPVTMQKSAQAYHGYWTYDFYSIDGHLGDMNKLKELVSEAHSKGIAVMLDVVANHTGDFQPNNGYAKAPFDQYDWYHHHGDVQDWNNQWWLENGDVAGLDDLNHENPAVAEELKKWISWLVQSTGVDGLRVDTVKHVPKWFWRDFDAAANTFTLGEVYHGDPAYVADYSNYLDGVLDFPMYYTIKDVFGQDQSMYQIRERFNEDWRYRNIHLNGVFLDNHDVPRFLNEASGRPGANWDKWPQLKTALGFMFTIRGIPVMYQGTEQGFHGGQDPYNREDMVFDADHELYRYVAKLNAVRNSHPALQNGSQQEKWVDDVFYSFQRSKDGDEVVVMINNSWNSQTRTIPNLSNLPDGTTMYNRMGSDRETVSGGKITSTLGPKEVKIFTK
>NZ_CP048103.1|WP_076526160.1|3149464_3149773_-|hypothetical-protein
MVMQQQGQQQQQQFQQAVQAARQAMQQVQQAQSQANPQALQQAQQQLQQAQQQVQQLQQSQGAQMNAQQQQQLQQAVQGLSQAQQKIQQAQSISKPAGYQQY
>NZ_CP048103.1|WP_040387442.1|3149895_3150192_-|hypothetical-protein
MQILYGAIVLFFLGTGVFYLQDEPPYAVHFMVIALYFFIILFEFRGNPFSRGTYLLLSLLLLGNAMIQFFLADHNAIYGLVSLFFAYFALQARRRVKQ
>NZ_CP048103.1|WP_076526158.1|3150257_3151691_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MSQFETVIGLEVHAELSTQTKIFCGCSTEFGAPPNTQTCPICLGHPGVLPVLNRQAVEFAMKAALALNCNIADMSKFDRKNYFYPDLPKAYQISQYDQPIGTDGWLEIEVDGEKKRIGITRVHLEEDAGKLIHSDQGDGTLVDYNRVGVPLIEIVSEPDMRSPEEGRAYLEKLKQIIQYTGVSDVKMEEGSLRCDANISLRPVGSTTFGTKTEMKNLNSFRNVERALKYEEERQAQVLSEGGTIVQQTMRWLEDQGRTQVMRSKEEAHDYRYFPEPDLVRLQPDEAWIERVKDSLPELPDARRERYMSTFSLSAYDAGLLTSSPKIADFFDQVAAAGADPKSAANWVTSELLGYLNNQGKELEETQITADSLARMIQLIDRGTISSKLAKKVFKELVEQGGDPAKIVEEKGWVQISDEGKLKGIVSDVLQANPQSVVDYKNGKDRALGFLVGQVMKATKGKANPKMVNQLILENIGE
>NZ_CP048103.1|WP_076526156.1|3151687_3153145_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatA
MSLLKKPLKEIHNGLESGELTASDLLDASLQRIRETDGTLRAFLQVDEAGARRRAQALDQRSGNRGPLAGIPMGIKDNISTEGVATTAGSKILEGYTPLYQATVMDRLEGAGANLVGKMNMDEFGMGSSNENSGFYETRNPWDPERVPGGSSGGSAAAVAAGQVSFALGSDTGGSIRQPAAFCGVVGLKPTYGRVSRFGLIAFASSLDQIGPLTGNVEDAAYVLQVMAGHDPLDSTSADVEVPDYLSALTGDVKGLKVAVPRELMGDGIAPGVKDRVNRALKVLEGLGAVVEEVSLPHLEYAVAAYYLLAPAEASSNLARYDGVRFGQRVAGENLIDMYSRTRSAGFGEEVKRRIMLGTYALSSGYYDAYYKKAQQVRTLIRRDFENIFDRYDVVVGPSAPTTAFKLGEKTEDPLTMYLNDICTIPVSLAGLPAVSVPCGLSDGLPVGLQIVGRPFAEARVLQVAHAYEQHGERLPEPKLGGGAQ
>NZ_CP048103.1|WP_040387443.1|3153157_3153448_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatC
MAISKEQVEHVAQLARLSLTEEEARLYTGQLNDILQFAEKLNELDTEGVEPTSHVLPMANVLREDEKRPSLDREQALQNAPDQKDGMFRVPDVFEE
>NZ_CP048103.1|WP_076526153.1|3153770_3154190_-|hypothetical-protein
MNSCEFVAAFNLRSDAPELVIQTLDYMTNIAKSSDAEEPDFDPPDHPLFQTDNWEFMLWRNDGSFAGFPYSELQIHEVNGEKFIDVVIRTYISLGFEQINHFIEWIKPYIEGAGEGDHFIGYWRFEDDEFYDTPHIIHV
>NZ_CP048103.1|WP_076526151.1|3154290_3155532_-|SGNH/GDSL-hydrolase-family-protein
MKKALIGAAALIWVIWAAFHWDTREEAEAVKPEKPWMGVWTASQQEPSGEALEGMENRTLRLIIHPHLDGKKVRIRLSNQFGRQPVTFRDIYIGKVEEGAALLPRTNTRVTFGGKETVTIEPGMTAHSDPLRFKVEAGEDLAVSLYVPGESGPVSWHRLAKQRSYISGPGNHAAETEPGAFTQPIQAWYWLTGVDVIPHPRTTGGIVTLGDSITDGAGSTHSTNHRYPDVLSVRLRQEGIRMSVMNAGISGNKIWRDDPVYGPSALNRLKRDVLSQPGVTDVILLEGINDIGHTPHDYDAEHIIAGLKRIIDQAHERGLNIYGGTLLPYKGANYYTEEGNATRKKVNEWIRTAGAFDGVFDFERILRDPADPDRLHPAYDSGDHLHPNDAGYRAMAETVNLDRFRPDPPAEIY

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Crispr_ID: NZ_CP048103_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP048103_17

3421686-3421764

Orphan

Consensus_repeat	Method
GTGCATAGCGAGACCGGGAACGGAGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP048103_17

>merge|NZ_CP048103|17|3421686-3421764|CRISPRCasFinder
GTGCATAGCGAGACCGGGAACGGAGTGACCTGGGCGAGACTTGTGCTGGTGAGTGCATAGCGAGACCGGGAACGGAGTG

>NZ_CP048103|17|17|3421686-3421764|CRISPRCasFinder
GTGCATAGCGAGACCGGGAACGGAGTG	ACCTGGGCGAGACTTGTGCTGGTGA
GTGCATAGCGAGACCGGGAACGGAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP048103.1\|WP_172998941.1\|3424615_3425080_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP048103.1\|WP_076523771.1\|3430900_3431935_-\|stage-II-sporulation-protein-D	unknown	unknown	gnl\|CDD\|274332
NZ_CP048103.1\|WP_009710430.1\|3429032_3429320_-\|sporulation-transcriptional-regulator-SpoIIID	unknown	unknown	gnl\|CDD\|378813
NZ_CP048103.1\|WP_076523924.1\|3429498_3430176_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP048103.1\|WP_009710426.1\|3425923_3427228_-\|NAD-dependent-malic-enzyme	unknown	unknown	gnl\|CDD\|223358
NZ_CP048103.1\|WP_076523783.1\|3417126_3417867_-\|N-acetyltransferase	unknown	unknown	gnl\|CDD\|100048
NZ_CP048103.1\|WP_076523778.1\|3421838_3423035_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340828
NZ_CP048103.1\|WP_076523787.1\|3411882_3413136_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340825
NZ_CP048103.1\|WP_076523777.1\|3423113_3424187_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|340819
NZ_CP048103.1\|WP_076523785.1\|3414247_3415639_-\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|225844
NZ_CP048103.1\|WP_009710417.1\|3415648_3417109_-\|oligosaccharide-flippase-family-protein	unknown	unknown	gnl\|CDD\|240533
NZ_CP048103.1\|WP_009710415.1\|3413150_3414251_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340825
NZ_CP048103.1\|WP_009710427.1\|3427301_3427823_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|273139
NZ_CP048103.1\|WP_009710419.1\|3417887_3419201_-\|nucleotide-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|223749
NZ_CP048103.1\|WP_040387500.1\|3430616_3430871_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225225
NZ_CP048103.1\|WP_009710428.1\|3427933_3428701_-\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|378713
NZ_CP048103.1\|WP_040387496.1\|3410691_3411606_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566
NZ_CP048103.1\|WP_076523780.1\|3420328_3421399_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP048103.1\|WP_076523781.1\|3419219_3420332_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP048103.1\|WP_009710411.1\|3409854_3410505_-\|sugar-transferase	unknown	unknown	gnl\|CDD\|274398

Protein	Function_ID	Function_description	E-value
NZ_CP048103.1\|WP_172998941.1\|3424615_3425080_-\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	9.56509e-85
NZ_CP048103.1\|WP_076523771.1\|3430900_3431935_-\|stage-II-sporulation-protein-D	gnl\|CDD\|274332	TIGR02870, Stage_II_sporulation_protein_D, stage II sporulation protein D. Stage II sporulation protein D (SpoIID) is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIID, along with SpoIIM and SpoIIP, is one of three major proteins involved in engulfment of the forespore by the mother cell. [Cellular processes, Sporulation and germination].	1.1185e-120
NZ_CP048103.1\|WP_009710430.1\|3429032_3429320_-\|sporulation-transcriptional-regulator-SpoIIID	gnl\|CDD\|378813	pfam12116, SpoIIID, Stage III sporulation protein D. This stage III sporulation protein is a small DNA-binding family that is essential for gene expression of the mother-cell compartment during sporulation. The domain is found in bacteria and viruses, and is about 40 amino acids in length. It has a conserved RGG sequence motif.	4.22432e-36
NZ_CP048103.1\|WP_076523924.1\|3429498_3430176_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	1.32078e-28
NZ_CP048103.1\|WP_009710426.1\|3425923_3427228_-\|NAD-dependent-malic-enzyme	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	2.37018e-141
NZ_CP048103.1\|WP_076523783.1\|3417126_3417867_-\|N-acetyltransferase	gnl\|CDD\|100048	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.	1.56579e-47
NZ_CP048103.1\|WP_076523778.1\|3421838_3423035_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	1.14401e-93
NZ_CP048103.1\|WP_076523787.1\|3411882_3413136_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	1.63428e-96
NZ_CP048103.1\|WP_076523777.1\|3423113_3424187_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	2.56743e-144
NZ_CP048103.1\|WP_076523785.1\|3414247_3415639_-\|O-antigen-ligase-family-protein	gnl\|CDD\|225844	COG3307, RfaL, Lipid A core - O-antigen ligase and related enzymes [Cell envelope biogenesis, outer membrane].	0.00406654
NZ_CP048103.1\|WP_009710417.1\|3415648_3417109_-\|oligosaccharide-flippase-family-protein	gnl\|CDD\|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.38713e-28
NZ_CP048103.1\|WP_009710415.1\|3413150_3414251_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340825	cd03794, GT4_WbuB-like, Escherichia coli WbuB and similar proteins. This family is most closely related to the GT1 family of glycosyltransferases. WbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.	1.22345e-45
NZ_CP048103.1\|WP_009710427.1\|3427301_3427823_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.37634e-21
NZ_CP048103.1\|WP_009710419.1\|3417887_3419201_-\|nucleotide-sugar-dehydrogenase	gnl\|CDD\|223749	COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane].	0
NZ_CP048103.1\|WP_040387500.1\|3430616_3430871_-\|hypothetical-protein	gnl\|CDD\|225225	COG2350, COG2350, Uncharacterized protein conserved in bacteria [Function unknown].	5.94132e-14
NZ_CP048103.1\|WP_009710428.1\|3427933_3428701_-\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|378713	pfam11772, EpuA, DNA-directed RNA polymerase subunit beta. This short 60-residue long bacterial family is the beta subunit of the DNA-directed RNA polymerase, likely to be EC:2.7.7.6. It is membrane-bound and is referred to by the name EpuA.	7.6027e-14
NZ_CP048103.1\|WP_040387496.1\|3410691_3411606_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.72785e-132
NZ_CP048103.1\|WP_076523780.1\|3420328_3421399_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	1.09828e-77
NZ_CP048103.1\|WP_076523781.1\|3419219_3420332_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	7.13937e-165
NZ_CP048103.1\|WP_009710411.1\|3409854_3410505_-\|sugar-transferase	gnl\|CDD\|274398	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase. Members of this family are generally found near other genes involved in the biosynthesis of a variety of exopolysaccharides. These proteins consist of two fused domains, an N-terminal hydrophobic domain of generally low conservation and a highly conserved C-terminal sugar transferase domain (pfam02397). Characterized and partially characterized members of this subfamily include Salmonella WbaP (originally RfbP), E. coli WcaJ, Methylobacillus EpsB, Xanthomonas GumD, Vibrio CpsA, Erwinia AmsG, Group B Streptococcus CpsE (originally CpsD), and Streptococcus suis Cps2E. Each of these is believed to act in transferring the sugar from, for instance, UDP-glucose or UDP-galactose, to a lipid carrier such as undecaprenyl phosphate as the first (priming) step in the synthesis of an oligosaccharide "block". This function is encoded in the C-terminal domain. The liposaccharide is believed to be subsequently transferred through a "flippase" function from the cytoplasmic to the periplasmic face of the inner membrane by the N-terminal domain. Certain closely related transferase enzymes, such as Sinorhizobium ExoY and Lactococcus EpsD, lack the N-terminal domain and are not found by this model.	1.4724e-105

>NZ_CP048103.1|WP_076523780.1|3420328_3421399_-|Gfo/Idh/MocA-family-oxidoreductase
MIHYGIIGCGHIANRHVAAIQAVEGARLAAVCDTDPIRLKPFMGGDVVEYTDVEEMLAHPDLDVVNICTPSGTHKDLTVQAAHAGKHVVVEKPMALTLEDANRMIEACRENGVQLCVVHPNRFRPAMRRLKERVESGAFGTFSHANATLRWNRNQAYYDQALWRGTRRMDGGVLMNQAIHNLDLLLWLMGEVEEVASYQATRLRRIETEDTSVSILKFKNGALGVIEAAVTIYPGNLEESLSLFGERGTAVIGGTRAQRIRTWRFADLSGESADREIQQVEEDPWGVPGHQCLIEGMTAAVRSGGSPPVTGEDGRRALSLVIACQQAAECGRPVRLQELAESGEQRFPTGARGMEK
>NZ_CP048103.1|WP_076523781.1|3419219_3420332_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MNRTPLLDLAAQYRGIGGEIQEAMRRVLESGRYILGPEVKALEEEVAAFSGTRHGIGVANGTDALLLTLDAWGIGPGDEVITSPFTFFATAEVISRLGARPVFVDIDPETYLFDVSQLEQKYTPRTRVILPVHIFGQPADLDEVRASAKDRGLKVLEDAAQAIGAEYKGRKVGSFGDAATYSFFPTKNLGGYGDGGMVVTDDEELAERLRSLRVHGRGPQSKYHHIDIGYNSRLDELQAAALRVKLRHLEAWNEARREKARIYDQSLADLPVVTPAVPADRKHIYHLYIIRTRRREELMEHLRERGIATAAYYPVPLHLQEVYRDLGYREGDLPVAEEVSRQAMALPLGPELDQVTQDGVIGAIRDFFLG
>NZ_CP048103.1|WP_009710419.1|3417887_3419201_-|nucleotide-sugar-dehydrogenase
MNTEQVLERINRKEAVIGVVGLGYVGLPLAVEKAKAGYRVIGFDIQPKRVEMVNRGINYIGDVVDEELADLVATGQLCATADYSDIARVDAVSICVPTPLDRYQQPDTSYVEGSAREIAKRLHPGMLVVLESTTYPGTTEEVVLPILEESGLKVGRDFYLAFSPERVDPGNKIYNTKNTPKVVGGITGDCTRTAAALYRNVLEGEVFEVSGPAVAEMEKILENTFRNLNIALANEMSILCNKMGIDYWEVVEAAKTKPYGFMAFYPGPGLGGHCIPIDPYYLTWKAREYKYHTRLIELAGEINNYMPDFVVERIMKMLSRHGKPLKGSKVLLLGIAYKRDIDDMRESPAIEILRQLVKQGADVQVNDPHIPSFRLDGRVYESKPLTAGLLEEADLTVITTDHSAYDYPLIGEKARLIFDTRNGLKDVQQIRGDYEKI
>NZ_CP048103.1|WP_076523783.1|3417126_3417867_-|N-acetyltransferase
MDRWIHPKARIGDGVKIGLFTVIEEGAVLGDNVTVGNHVTIHADTIIGAGTTIADQAVVGRWPRPAQTSTVQVDTALSPLSLGEGCTIGTHAVLYRGSRIGAEVLVADHAFVREQCLIGDRVLIGRGVAVENRVEIGSCTKIQTNAYITAHTRLEEQVFIAPGVTTTNDNYMGRTEERFRHVKGPTVKRGARVGGGAILLPGVVIAEESFIAAGAVVHRDTEAATVYAGVPAKPLRRVPEGEMRGS
>NZ_CP048103.1|WP_009710417.1|3415648_3417109_-|oligosaccharide-flippase-family-protein
MLTKIKQLFSDSTAFAFALMGNKIVSFLLVPVYTRQLLSSQFADWDQTNTIAMVLTYLCILGTDTAFAYYYFAAKDEKDRNGYFTAAVMFPTLISLVFLLIVYFISEPSSKLLFEHPEGYPHLLTMAVLVIVFNVIIQQTLAYARYSRQVWTFNIGSMSFVIGSSLASVYFVVVEKLGVMGIFYGQIVAQALVAAILLWHYRDKFTLSVQKRHVKDLLNYGVPLLPALLAFWVMNAVSRPMIYHMVSPEVAGVFGLALRFASMIALLTTAFQLAWRPFSVSIKDREDAQQIYSLLGRGFLVLATFFILFLTFFIQPLIQVVAGNKEYFGAYPYVWMLATGTVLNTMHLIVGVGLLIQKRTKEISKTFLVAAVIYLVGNAILIPVVGPWGTAAMNVVTYLYAFLSVYRKGQKVYRVDFRMRSMMIYFGIYLAVLSAITFAQVQGWSGLWMVYLLSLAVMVAAVFLTGVFNKSSITYLRERLPNLMKR
>NZ_CP048103.1|WP_076523785.1|3414247_3415639_-|O-antigen-ligase-family-protein
MSLLWMTGQRQLNRLFHLMVVCAVLGPTLGVTLLPGFRMTGFRVVLFLLVAGLIIRRIRHHSPELSPLVPVRRYVAFFACWAIYGWVSLAWAGHLESGLKYSSFLVMMLLLCLSFPYFIHSSGSIRRSSRILFGVFFVLVIFGLVESLTMWHLPVSRYFGENQPYPTSFFTNQNDFATAITLGLPFLVTALYMIPMRRWNKGVVYATGVIALVCLLMTGSRSNSGFALPLAGLVWGLLIPFTVERWKLNRTHLLKGAGLLLLAILLVHQLTSILLSQHSRDKLGSTLGVFQDLQGWDFREGGEEKLKQAASGDQSIHTRKALIANGLRLLHQSRYLGVGAGNIEYYMQGMPGVDKTNIHNWWAEVLVNFGVVIFIPYMALYFLLLYRLWRLARVKGPKLPSPWIRWGAVSSLIALIGYFFGGMSPSTAIHFTPMWVVLGFALAVVAAGSREREASSPRGRDSA
>NZ_CP048103.1|WP_009710415.1|3413150_3414251_-|glycosyltransferase-family-4-protein
MKKVMIFSSVHSHNDSRVFYKEAVSLARAGYRVELHALADFEQREEQGVKIIGLPRPKNRVARLLSGWRLFRRARSSGADRFHFHDPELLPWGVLLRWWTGAPVIYDAHEDLPKQIHTKPWIPKWLRKPLSRVADLLEKGMARRLSAVVTATEPIARNFSACPRVEVVKNYPPPFHPPPSCHEDEKNRILYIGGISYLRGYREMIEMMDHLPGELEAELHLIGPMQHIRPEDREEEFLRQKGVFLHGKVSYTEVQQWLGRGKVGLVCLHPVENYRESLPIKMFEYMAAGLPVIATRFPLWREIVEGSGSGRTVDPLRPREMAAEVAQILRDDELRRRMGANGRRAHREVYNWRAEEKKLIRLYQEL
>NZ_CP048103.1|WP_076523787.1|3411882_3413136_-|glycosyltransferase-family-4-protein
MRIWIANHYAAPPHLGGITRHYELAREWAAEEQAEVTLWLSSFNHTRRRMIGGAERGSVDTPGLRLRWLWSFPHTRNDFRRVLNMVSFSCLFFLAGCFHRRPDLLLASSPHLLTPLAGWLLSKVKRCPFVLEVRDLWPDTLIQMKGLKSPPVIKALTRLESFLYRRADKIIVLTEYQRKFISSKGIAPHKISLIPNGIMPGSWHPRESGKRSYRRRMGVESYRFVALYAGAHGPANALEHVVRAAAHLPDRCAIVLIGDGPEKDRLRQLKNELGLHHVHLLDPVPKEEIYHYIDAADCGIISLADHEIFRGARPNKLFDYLYVGKPVITTVDGEVRWIVEENGVGLFSGAENPRGLAEAIRKLTTLTREERDRIAERGQRYIERFGNRRKLAGELLRELETLLTPGAKQMEEINRSG
>NZ_CP048103.1|WP_040387496.1|3410691_3411606_-|NAD-dependent-epimerase/dehydratase-family-protein
MKVLVTGGAGFIGSHIVDQLLEKGHQAVVVDNLSTGEEEYLRPDLPFYRMDIQDEGIDRVIGEEQPDAVIHQAAQSQVTRSIEDPLGDARTNILGTIRLLESCRRHGVAKIIYASSAAIYGNPQYLPIDEQHPLSPLSPYGISKGTPEEYIRAYHSLHGLSFTIFRYANVYGIRQVPHGEGAVISIFIDRLLRDLPLTIHGDGEQTRDYIYVEDVARANVAALARGDGETLNLGTGVNTSLNDLVKTMEKISGRKLEVNYGPNRPGDIKYSYFNIDRVKSVLNWDPITDLETGLTRTLDFYGAL
>NZ_CP048103.1|WP_009710411.1|3409854_3410505_-|sugar-transferase
MRSKAVAYESDLRARTESSPYTTTGYYPLFKRGFEVVFSIALLIFILPVLVLTAIAIRLESKGPVLYSQERVGLNGSRFHVFKLRSMRVDAEKNGPQWAAKNDPRVTRVGKFIRKTRIDEVPQLINVLRGDMSLIGPRPERHVFTEKFSREIPGFKQRLAVKPGLTGWAQVNGGYEATPEEKFQLDMYYIRSQSFALDMKILWRTVWVVLSGSGAR
>NZ_CP048103.1|WP_076523778.1|3421838_3423035_-|glycosyltransferase-family-4-protein
MSLKILVISHMYPNPANPMSGVFVHNQVKAMKQMGLEIRVVSPIPRFPLYPKWRVYTQFPRTATMDGIPIHYVPARMFPGGLFFQAFGYLYYQALVREIQQLKESFAFDLIHCHTIFPDGYAGTLLKKVFSVPVVSTIHGSDIRLYPFRSKGVLERTELALRNCDHIVAVSNRLKRDAQKLVAGVEATTIYNGFDPKRFYPRSQTVAREHLRLPKKEKIILYVGNLYKVKGIEYLIDAFAIVAAQHPDSHLYLVGDGPLRGPLKKRAREKGIEERIHFTGRRPHDEIPWWINSSDVVALSSLSEGLPSILLEAMGCGKPVVATDVGGISEILQHRKTGFLAKPKDPEDLVRYLRILLMDDEGLAHDMGERAYAESGSHTWQRNAERMVKLYTQLLEAL
>NZ_CP048103.1|WP_076523777.1|3423113_3424187_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKVVTVVGARPQFIKAAPVSRCLRRRGTEILVHTGQHYDAAMSGIFFEELKIPRPDYHLEVGSKTHGAQTGEMLSGLEKVLIQEEPDWVLVYGDTNTTLAGALAAAKLQLPVAHVEAGLRSFNRQMPEEINRVLTDHIAQLLCCPTETAVQHLASEGIHRGVVQVGDVMVDALRFNRELAGDRNILEQLGAEPREYVLVTLHRAENTDHPDRLEEIISALNELESPMILPLHPRTRNRMERQGLTFTNPRLKVIEPVGYLDMLHLEMNAAKILTDSGGVQKEAFLLQVPCITMRDETEWTETVKQKTNVLVGANKRKIIEYVESFHVDFAKVDPVFGNGHTADRIVELLGKSGGCQQ
>NZ_CP048103.1|WP_172998941.1|3424615_3425080_-|3-hydroxyacyl-ACP-dehydratase-FabZ
MLQGKERFGKMEMDINRIQEVIPHRYPFLLVDRILECETGKRATGIKNVTMTEPYFQGHFPGHPVMPGVLIVEALAQVGAVAVLGMEENRGKLAFFAGIEKFRFRGQVGPGDVLTLEVEMLKLRPSFGKGKAVARVKDRVVAEGEIMFAIQDPT
>NZ_CP048103.1|WP_009710426.1|3425923_3427228_-|NAD-dependent-malic-enzyme
MTDRNIIRALVVETPSLPGNLGKVATAIGLSGGDIGDIETVKVGVASTLRNITVHCDDEEQLEQVLEGIRRLGDGIRLHAVSDDVLRAHEGGKIRMKSRLDIRSLADLRRVYTPGVADVCREIHKDPEKSRHYTSIADTVAIVTDGTAILGLGDVGPVAGLPVMEGKAALFDRFVGISGVPILLSTRDPEEMVRTVKNIAPGFGGILLEDISSPRCFEVEERLKQELDIPVMHDDQHGTAVVTLAAVITAGRNAGVDLKNAVVGQIGLGAAGIAICRMLMDYGVKQVIGADKSATAKERLRSIGGETVDELEELMERADIVVATTGVSGLIREEWVRKGQVILALSNPKPEIEPDVAQRAGAAYAADGRSVNNLLGFPGIFRGALNANAKKITRQMLVAAATAIAECTKEGDLVPHPLDPKVHQAVARAVEKHA
>NZ_CP048103.1|WP_009710427.1|3427301_3427823_-|CDP-alcohol-phosphatidyltransferase-family-protein
MNLPNTVTLIRFTLIPIYLTIFFSDLPYRMQWAFGVLLLAGITDVIDGYLARRHSQVTQLGIMLDPLADKMMMLAVFLSLLISQRISIPAAVAIFLRDLGMIVASAFFHFRGKLTVPANIMGKLTTVLYYVALFLLMFDHPIGTEFLWGVIIFSFVTSLVYLIQFNLLNERSM
>NZ_CP048103.1|WP_009710428.1|3427933_3428701_-|DNA-directed-RNA-polymerase-subunit-beta
MQQKEEKPTQVWAKNTESNSEEAQAGASKEEKAATDEQLTKPTVSPAPPEQHAEEKAGSPPKPIEEETGASGEVPPKPETQDFQSDGIKTGDHRSTTDWEDQLDRDWGVGASPSPSHPGPEDGKSEEDPGVTTKASARPEEHPKPAGVLKWKKGDSGEDVKTDPEPEGEPAEEEIPRGETGSPSDDRDREEAPEQGERKSLTKKVLLFTFIWFPLLLVAALAGGLLIGYSVIGDDPAGDVFTRDLWEHLYNLIYG
>NZ_CP048103.1|WP_009710430.1|3429032_3429320_-|sporulation-transcriptional-regulator-SpoIIID
MHDYIKERTIKIGRYFVETRNTVRTIAKEFGVSKSTVHKDLTERLPEINSELANQVKEILEYHKSIRHLRGGEATKIKYKRARPQKEKKLEATKI
>NZ_CP048103.1|WP_076523924.1|3429498_3430176_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MKSEDHKPTGSVEKISRLKWKRWMSKKWFFPAVYLAAAALILSLVWWYQSAQDLGVTKPNTGLEELKQEETAPTEKPAVEMKLPVSPGSKAGTTMEYYDEAGSEKSKEAALVHYANTYWPHSGWDFARKDGKTFDVTAVLAGKVVRVEENPLTGHLVEVKHKNGLITVYQSLAGVIVKTGDTVKQGQKIAEAGHNKFEKEAGTHLHFEMRKDGESVNPATYLKQN
>NZ_CP048103.1|WP_040387500.1|3430616_3430871_-|hypothetical-protein
MPHFAAILHMERPELNQEYRPLHLEYLDRLEQQGRVFAKGPFADGSGGMVIYIADTMEEARELAEGDPYVVKGVRRLELREWKI
>NZ_CP048103.1|WP_076523771.1|3430900_3431935_-|stage-II-sporulation-protein-D
MHKGMILILAVLIGVMVAVPAALVSLDRNDPSLSSIRVDGGSSAASLDSGPGVKVYLSREKKVETFPMERYIRGVVAAEMPVNFHPEALKAQALAARTYIVDRLSRGDFSDMAKWGKKAGKANVSDTVNHQVFLTDKQLKEQWGDDYETYSALINQAVVETAGQVIQYQGKPIYAAFFSTSNGKTENSEDYFAEEYPYLRSVPSPWDEASPKYRDRKQFAVADFVDKISRSTGKQVAVEAFTGGGWLRVTQRTAGGSADKVQVGDQVFTGRQIREALHLSSADFTFRLSQGTVTVETKGYGHGVGMSQWGANFMAKQGKSAKEIIRHYYRGVEIGSMDSYLKKE

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3312965-3312995	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3327852-3327882	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3543785-3543815	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3543838-3543868	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3543891-3543921	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1035172-1035202	0	1.0
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1178930-1178960	0	1.0
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	3004694-3004719	0	1.0
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	416307-416332	0	1.0
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP048103.1	2923046-2923074	1	0.966
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP048103.1	3421766-3421794	1	0.966
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	560980-561010	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1284122-1284152	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1501155-1501185	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1972029-1972059	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2933115-2933145	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3336175-3336205	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3457804-3457834	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3457910-3457940	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3562711-3562741	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	459820-459850	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1453675-1453705	1	0.968
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1749462-1749492	1	0.968
NZ_CP048103_5	5.1\|1724532\|28\|NZ_CP048103\|CRISPRCasFinder	1724532-1724559	28	NZ_CP048103.1	3387962-3387989	1	0.964
NZ_CP048103_5	5.1\|1724532\|28\|NZ_CP048103\|CRISPRCasFinder	1724532-1724559	28	NZ_CP048103.1	933343-933370	1	0.964
NZ_CP048103_7	7.1\|2104568\|26\|NZ_CP048103\|CRISPRCasFinder	2104568-2104593	26	NZ_CP048103.1	524286-524311	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	23503-23528	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	23555-23580	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	460099-460124	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	878494-878519	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1749502-1749527	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	130408-130433	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	952963-952988	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1501120-1501145	1	0.962
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2923019-2923044	1	0.962
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	2712164-2712190	1	0.963
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	341761-341785	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	380586-380610	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	380638-380662	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	654168-654192	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1178963-1178987	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2014429-2014453	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3004739-3004763	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3465722-3465746	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	304968-304992	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	305020-305044	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	880491-880515	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2190566-2190590	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2996618-2996642	1	0.96
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3363597-3363621	1	0.96
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP048103.1	1312508-1312536	2	0.931
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP048103.1	304987-305015	2	0.931
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP048103.1	3475347-3475375	2	0.931
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	130443-130473	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	462349-462379	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1724561-1724591	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	1732616-1732646	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2020677-2020707	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2190593-2190623	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2335716-2335746	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2714556-2714586	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3090738-3090768	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	76918-76948	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	108503-108533	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	497335-497365	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	520660-520690	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	540585-540615	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	2014344-2014374	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3373870-3373900	2	0.935
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP048103.1	3387930-3387960	2	0.935
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	23451-23476	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	124949-124974	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	690428-690453	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1312590-1312615	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1312642-1312667	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1125575-1125600	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	1686263-1686288	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2079042-2079067	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2430039-2430064	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2430091-2430116	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2430143-2430168	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2712173-2712198	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	2963378-2963403	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	3363983-3364008	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	3457875-3457900	2	0.923
NZ_CP048103_15	15.1\|2996662\|26\|NZ_CP048103\|CRISPRCasFinder	2996662-2996687	26	NZ_CP048103.1	3467239-3467264	2	0.923
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	952954-952980	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	1501111-1501137	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	3203013-3203039	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	23511-23537	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	23563-23589	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	124957-124983	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	145560-145586	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	690488-690514	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	1662659-1662685	2	0.926
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NZ_CP048103.1	2014392-2014418	2	0.926
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	76951-76975	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	108536-108560	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	336072-336096	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	336124-336148	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	336176-336200	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	494943-494967	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	524303-524327	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	540618-540642	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	540670-540694	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	930016-930040	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1312531-1312555	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1406591-1406615	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2137114-2137138	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3373955-3373979	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	462322-462346	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	880543-880567	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	933292-933316	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1064184-1064208	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1530085-1530109	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1714256-1714280	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	1972002-1972026	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2020650-2020674	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	2078998-2079022	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3327773-3327797	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3327825-3327849	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3343531-3343555	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3467195-3467219	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3470330-3470354	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3477582-3477606	2	0.92
NZ_CP048103_17	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	NZ_CP048103.1	3492007-3492031	2	0.92

1. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3312965-3312995, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

2. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3327852-3327882, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

3. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3543785-3543815, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

4. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3543838-3543868, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

5. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3543891-3543921, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

6. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1035172-1035202, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

7. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1178930-1178960, mismatch: 0, identity: 1.0

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcgaagcgaccct	Protospacer
*******************************

8. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 3004694-3004719, mismatch: 0, identity: 1.0

gcggaagccccctggcgagacttgta	CRISPR spacer
gcggaagccccctggcgagacttgta	Protospacer
**************************

9. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 416307-416332, mismatch: 0, identity: 1.0

gcggaagccccctggcgagacttgta	CRISPR spacer
gcggaagccccctggcgagacttgta	Protospacer
**************************

10. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to position: 2923046-2923074, mismatch: 1, identity: 0.966

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
tggtgagtgcatagcgagaccgggaacga	Protospacer
***********************.*****

11. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to position: 3421766-3421794, mismatch: 1, identity: 0.966

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
tggtgagtgcatagcgagaccgggaacga	Protospacer
***********************.*****

12. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 560980-561010, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

13. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1284122-1284152, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagcggagcgaccct	Protospacer
*********************.*********

14. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1501155-1501185, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

15. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1972029-1972059, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggggagtgaagcgaccct	Protospacer
*******************.***********

16. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2933115-2933145, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

17. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3336175-3336205, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatatcgagaccggggagcgaagcgaccct	Protospacer
***** *************************

18. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3457804-3457834, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

19. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3457910-3457940, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccgggaagcgaagcgaccct	Protospacer
****************.**************

20. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3562711-3562741, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

21. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 459820-459850, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

22. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1453675-1453705, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

23. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1749462-1749492, mismatch: 1, identity: 0.968

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcgaccct	Protospacer
******** **********************

24. spacer 5.1|1724532|28|NZ_CP048103|CRISPRCasFinder matches to position: 3387962-3387989, mismatch: 1, identity: 0.964

cgaccccggcacgacttgtgctggtgag	CRISPR spacer
cgaccccggcacgacttgtactggtgag	Protospacer
*******************.********

25. spacer 5.1|1724532|28|NZ_CP048103|CRISPRCasFinder matches to position: 933343-933370, mismatch: 1, identity: 0.964

cgaccccggcacgacttgtgctggtgag	CRISPR spacer
cgacctcggcacgacttgtgctggtgag	Protospacer
*****.**********************

26. spacer 7.1|2104568|26|NZ_CP048103|CRISPRCasFinder matches to position: 524286-524311, mismatch: 1, identity: 0.962

gcggtctcgctatgcactcaccagta	CRISPR spacer
gcggtcacgctatgcactcaccagta	Protospacer
****** *******************

27. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 23503-23528, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

28. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 23555-23580, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

29. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 460099-460124, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

30. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 878494-878519, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

31. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1749502-1749527, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

32. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 130408-130433, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

33. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 952963-952988, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

34. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1501120-1501145, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

35. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2923019-2923044, mismatch: 1, identity: 0.962

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgagacttgta	Protospacer
***.**********************

36. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 2712164-2712190, mismatch: 1, identity: 0.963

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagacccctggcga	Protospacer
************************.**

37. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 341761-341785, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

38. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 380586-380610, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtgctggtga	Protospacer
**** ********************

39. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 380638-380662, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtgctggtga	Protospacer
**** ********************

40. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 654168-654192, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

41. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1178963-1178987, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

42. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2014429-2014453, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

43. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3004739-3004763, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

44. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3465722-3465746, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

45. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 304968-304992, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

46. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 305020-305044, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtgctggtga	Protospacer
**** ********************

47. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 880491-880515, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

48. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2190566-2190590, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtgctggtga	Protospacer
**** ********************

49. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2996618-2996642, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

50. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3363597-3363621, mismatch: 1, identity: 0.96

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggtga	Protospacer
****.********************

51. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to position: 1312508-1312536, mismatch: 2, identity: 0.931

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
tggtgagtgcatagcgagaccggggacga	Protospacer
***********************..****

52. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to position: 304987-305015, mismatch: 2, identity: 0.931

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
tggtgagtgcatagcgaaaccgggaacga	Protospacer
*****************.*****.*****

53. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to position: 3475347-3475375, mismatch: 2, identity: 0.931

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
tggcgagtgcatagcgagaccgggaacga	Protospacer
***.*******************.*****

54. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 130443-130473, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccagggagcgaagcgaccct	Protospacer
******** ****.*****************

55. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 462349-462379, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagtgtgaccggggagcgaagcgaccct	Protospacer
******.* **********************

56. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1724561-1724591, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagtgaccct	Protospacer
******** ***************.******

57. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 1732616-1732646, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgatcggggagcgaagcgaccct	Protospacer
******** **.*******************

58. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2020677-2020707, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccagggagcgaagcgaccct	Protospacer
******** ****.*****************

59. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2190593-2190623, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagcaaccct	Protospacer
******** ****************.*****

60. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2335716-2335746, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcaaagcgaccct	Protospacer
******** ***********.**********

61. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2714556-2714586, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagtgtgaccggggagcgaagcgaccct	Protospacer
******.* **********************

62. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3090738-3090768, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgactggggagcgaagcgaccct	Protospacer
******** ***.******************

63. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 76918-76948, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcaagaccggggagtgaagcgaccct	Protospacer
*******.***********.***********

64. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 108503-108533, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcaaagcgaccct	Protospacer
******** ***********.**********

65. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 497335-497365, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgagaccggagagcgaaacgaccct	Protospacer
***************.*******.*******

66. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 520660-520690, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgacccgggagcgaagcgaccct	Protospacer
******** **** *****************

67. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 540585-540615, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccagggagcgaagcgaccct	Protospacer
******** ****.*****************

68. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 2014344-2014374, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccggggagcgaagccaccct	Protospacer
******** **************** *****

69. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3373870-3373900, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccagggagcgaagcgaccct	Protospacer
******** ****.*****************

70. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to position: 3387930-3387960, mismatch: 2, identity: 0.935

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gcatagcgtgaccagggagcgaagcgaccct	Protospacer
******** ****.*****************

71. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 23451-23476, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctagcgagacttgta	Protospacer
***.*********.************

72. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 124949-124974, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgaggcttgta	Protospacer
***.***************.******

73. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 690428-690453, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagcccactggcgagacttgta	Protospacer
***.****** ***************

74. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1312590-1312615, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgatagccccctggcgagacttgta	Protospacer
***. *********************

75. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1312642-1312667, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgatagccccctggcgagacttgta	Protospacer
***. *********************

76. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1125575-1125600, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagcaccctggcgagacttgta	Protospacer
***.**** *****************

77. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 1686263-1686288, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccccggcgagacttgta	Protospacer
***.********.*************

78. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2079042-2079067, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagccccctggcgatacttgta	Protospacer
***.************** *******

79. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2430039-2430064, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgatagccccctggcgagacttgta	Protospacer
***. *********************

80. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2430091-2430116, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgatagccccctggcgagacttgta	Protospacer
***. *********************

81. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2430143-2430168, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgatagccccctggcgagacttgta	Protospacer
***. *********************

82. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2712173-2712198, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagacccctggcgagacttgta	Protospacer
***.*** ******************

83. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 2963378-2963403, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagcgccctggcgagacttgta	Protospacer
***.**** *****************

84. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 3363983-3364008, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagctccctggcgagacttgta	Protospacer
***.****.*****************

85. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 3457875-3457900, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagcaccctggcgagacttgta	Protospacer
***.**** *****************

86. spacer 15.1|2996662|26|NZ_CP048103|CRISPRCasFinder matches to position: 3467239-3467264, mismatch: 2, identity: 0.923

gcggaagccccctggcgagacttgta	CRISPR spacer
gcgaaagcaccctggcgagacttgta	Protospacer
***.**** *****************

87. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 952954-952980, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

88. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 1501111-1501137, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

89. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 3203013-3203039, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

90. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 23511-23537, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

91. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 23563-23589, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

92. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 124957-124983, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

93. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 145560-145586, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

94. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 690488-690514, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

95. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 1662659-1662685, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagccccctggcga	Protospacer
**************** *******.**

96. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to position: 2014392-2014418, mismatch: 2, identity: 0.926

agaccgggggcgaaagacccctggtga	CRISPR spacer
agaccgggggcgaaagacctctggcga	Protospacer
*******************.****.**

97. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 76951-76975, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtgctggaga	Protospacer
****.***************** **

98. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 108536-108560, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

99. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 336072-336096, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

100. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 336124-336148, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

101. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 336176-336200, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

102. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 494943-494967, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

103. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 524303-524327, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtactggtga	Protospacer
****.************.*******

104. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 540618-540642, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

105. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 540670-540694, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

106. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 930016-930040, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgaaacttgtgctggtga	Protospacer
**** *****.**************

107. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1312531-1312555, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

108. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1406591-1406615, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

109. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2137114-2137138, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

110. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3373955-3373979, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggtgagacttgtgctggtga	Protospacer
****.**.*****************

111. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 462322-462346, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

112. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 880543-880567, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctagtcgagacttgtgctggtga	Protospacer
****.* ******************

113. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 933292-933316, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acccaggcgagacttgtgctggtga	Protospacer
***..********************

114. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1064184-1064208, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtactggtga	Protospacer
****.************.*******

115. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1530085-1530109, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

116. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1714256-1714280, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

117. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 1972002-1972026, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

118. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2020650-2020674, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtactggtga	Protospacer
****.************.*******

119. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 2078998-2079022, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

120. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3327773-3327797, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

121. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3327825-3327849, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

122. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3343531-3343555, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

123. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3467195-3467219, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accttggcgagacttgtactggtga	Protospacer
**** ************.*******

124. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3470330-3470354, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtactggtga	Protospacer
****.************.*******

125. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3477582-3477606, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
acctaggcgagacttgtactggtga	Protospacer
****.************.*******

126. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to position: 3492007-3492031, mismatch: 2, identity: 0.92

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	KC954775	UNVERIFIED: Cronobacter phage S13, complete genome	92702-92728	5	0.815
NZ_CP048103_16	16.1\|3145492\|27\|NZ_CP048103\|CRISPRCasFinder	3145492-3145518	27	NC_028773	Cronobacter phage S13, complete genome	92702-92728	5	0.815
NZ_CP048103_5	5.1\|1724532\|28\|NZ_CP048103\|CRISPRCasFinder	1724532-1724559	28	NZ_CP040721	Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence	195641-195668	6	0.786
NZ_CP048103_5	5.1\|1724532\|28\|NZ_CP048103\|CRISPRCasFinder	1724532-1724559	28	NZ_CP018064	Rhodococcus sp. 2G plasmid p1, complete sequence	203149-203176	6	0.786
NZ_CP048103_5	5.1\|1724532\|28\|NZ_CP048103\|CRISPRCasFinder	1724532-1724559	28	NZ_CP032156	Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence	31740-31767	6	0.786
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	620817-620845	7	0.759
NZ_CP048103_3	3.1\|561035\|31\|NZ_CP048103\|CRISPRCasFinder	561035-561065	31	NZ_CP027023	Streptomyces sp. WAC00288 plasmid p1, complete sequence	17586-17616	7	0.774
NZ_CP048103_1	1.1\|82120\|29\|NZ_CP048103\|CRISPRCasFinder	82120-82148	29	NC_018832	Providencia phage Redjac, complete genome	23879-23907	8	0.724

1. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to KC954775 (UNVERIFIED: Cronobacter phage S13, complete genome) position: , mismatch: 5, identity: 0.815

agaccgggggcgaaagacccctggtga	CRISPR spacer
taatcggggtcgaaagaccccttgtga	Protospacer
 .*.***** ************ ****

2. spacer 16.1|3145492|27|NZ_CP048103|CRISPRCasFinder matches to NC_028773 (Cronobacter phage S13, complete genome) position: , mismatch: 5, identity: 0.815

agaccgggggcgaaagacccctggtga	CRISPR spacer
taatcggggtcgaaagaccccttgtga	Protospacer
 .*.***** ************ ****

3. spacer 5.1|1724532|28|NZ_CP048103|CRISPRCasFinder matches to NZ_CP040721 (Rhodococcus pyridinivorans strain YF3 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.786

cgaccccggcacgacttgtgctggtgag	CRISPR spacer
tggccccggcacgacttgtgccggggcc	Protospacer
.*.******************.** *

4. spacer 5.1|1724532|28|NZ_CP048103|CRISPRCasFinder matches to NZ_CP018064 (Rhodococcus sp. 2G plasmid p1, complete sequence) position: , mismatch: 6, identity: 0.786

cgaccccggcacgacttgtgctggtgag	CRISPR spacer
tggccccggcacgacttgtgccggggcc	Protospacer
.*.******************.** *

5. spacer 5.1|1724532|28|NZ_CP048103|CRISPRCasFinder matches to NZ_CP032156 (Mycobacterium sp. ELW1 plasmid pELW1-1, complete sequence) position: , mismatch: 6, identity: 0.786

cgaccccggcacgacttgtgctggtgag	CRISPR spacer
tggccccgggacgacgtgtgctggtgct	Protospacer
.*.****** ***** **********

6. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to NZ_CP017941 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
aggtgagcgcatagcgagagcggaactct	Protospacer
 ******.*********** ***** .

7. spacer 3.1|561035|31|NZ_CP048103|CRISPRCasFinder matches to NZ_CP027023 (Streptomyces sp. WAC00288 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.774

gcatagcgagaccggggagcgaagcgaccct	CRISPR spacer
gagctgcgcgaccggggagcgaagcggccca	Protospacer
* .. *** *****************.***

8. spacer 1.1|82120|29|NZ_CP048103|CRISPRCasFinder matches to NC_018832 (Providencia phage Redjac, complete genome) position: , mismatch: 8, identity: 0.724

tggtgagtgcatagcgagaccggaaacga	CRISPR spacer
gttagagtgcatagcgctaccggaaacct	Protospacer
    ************  *********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

24170 : 76063

Bacillus_phage(18.18%)

tail,holin,integrase

attL 23386:23407|attR 76890:76911

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
23386:23407	attL	NA	NA	NA	NA
WP_076523642.1\|24170_24983_+	metal ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.1e-18	36.0
WP_009710607.1\|24979_25843_+	metal ABC transporter permease	NA	NA	NA	NA
WP_009710608.1\|25846_26287_+	transcriptional repressor	NA	NA	NA	NA
WP_040388243.1\|26317_26758_+	nucleoside deaminase	S4VYT2	Pandoravirus	1.0e-07	37.6
WP_076523641.1\|27002_28160_-\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	3.6e-76	42.1
WP_076523639.1\|28203_28827_-	ImmA/IrrE family metallo-endopeptidase	A0A0A8WEK1	Clostridium_phage	7.0e-10	31.0
WP_076523637.1\|28919_29243_-	helix-turn-helix transcriptional regulator	A0A0A8WE28	Clostridium_phage	4.9e-15	40.7
WP_076523635.1\|29417_29639_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_084189848.1\|29661_29955_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_076523633.1\|30477_30792_+	hypothetical protein	NA	NA	NA	NA
WP_076523631.1\|30875_31865_+	winged helix-turn-helix domain-containing protein	D2XR43	Bacillus_phage	7.3e-54	70.4
WP_084189847.1\|31782_32649_+	ATP-binding protein	A0A0A0YRV1	Pseudomonas_phage	2.0e-10	37.0
WP_076523629.1\|32713_32923_+	hypothetical protein	NA	NA	NA	NA
WP_076523628.1\|32926_33142_+	hypothetical protein	NA	NA	NA	NA
WP_076523626.1\|33157_33766_+	dUTP diphosphatase	R9TQ23	Paenibacillus_phage	5.4e-39	45.5
WP_076523625.1\|33765_34011_+	hypothetical protein	NA	NA	NA	NA
WP_076523623.1\|34070_34283_+	hypothetical protein	A0A2P1CEV8	Mycobacterium_phage	2.2e-08	49.2
WP_076523621.1\|35108_35408_+	hypothetical protein	NA	NA	NA	NA
WP_143457033.1\|35515_35755_+	hypothetical protein	NA	NA	NA	NA
WP_159439665.1\|36320_36473_+	hypothetical protein	NA	NA	NA	NA
WP_076523613.1\|36456_37023_+	sigma-70 family RNA polymerase sigma factor	A0A0E3D9C3	Bacillus_phage	9.2e-09	28.4
WP_076523612.1\|37141_37648_+	hypothetical protein	NA	NA	NA	NA
WP_076523610.1\|37798_38233_+	DUF488 domain-containing protein	A0A1B3AYW8	Gordonia_phage	1.1e-14	35.0
WP_076523609.1\|38219_39044_+	hypothetical protein	NA	NA	NA	NA
WP_076523607.1\|39279_39975_+	site-specific DNA-methyltransferase	Q775B4	Bordetella_phage	4.9e-28	37.2
WP_076523605.1\|40327_41038_+	hypothetical protein	NA	NA	NA	NA
WP_084189845.1\|41051_41720_+	class D sortase	NA	NA	NA	NA
WP_076523603.1\|41742_42018_+	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	1.1e-18	53.9
WP_076523601.1\|42082_42673_+	metal-dependent hydrolase	NA	NA	NA	NA
WP_076523599.1\|42740_43226_+	hypothetical protein	G3MB11	Bacillus_virus	1.1e-07	38.9
WP_159439664.1\|43684_44548_+\|integrase	tyrosine-type recombinase/integrase	A0A1S5SEW7	Streptococcus_phage	1.4e-08	29.8
WP_076523595.1\|44604_44922_+	hypothetical protein	NA	NA	NA	NA
WP_076523593.1\|44918_45722_+	conjugal transfer protein	NA	NA	NA	NA
WP_076523591.1\|45735_46032_+	hypothetical protein	NA	NA	NA	NA
WP_076523589.1\|46038_46518_+	hypothetical protein	NA	NA	NA	NA
WP_076523586.1\|46558_49195_+	ATP-binding protein	NA	NA	NA	NA
WP_076523583.1\|49212_49659_+	hypothetical protein	NA	NA	NA	NA
WP_076523581.1\|49655_51617_+	hypothetical protein	NA	NA	NA	NA
WP_076523579.1\|51613_52231_+	hypothetical protein	NA	NA	NA	NA
WP_143457032.1\|52277_53246_+	CHAP domain-containing protein	A0A1X9SGZ2	Bradyrhizobium_phage	6.6e-15	39.2
WP_172998880.1\|53539_53917_+	hypothetical protein	NA	NA	NA	NA
WP_076523573.1\|53950_56449_+	hypothetical protein	NA	NA	NA	NA
WP_076523571.1\|56638_57925_+	replication-relaxation family protein	NA	NA	NA	NA
WP_076523569.1\|58176_58779_+	hypothetical protein	NA	NA	NA	NA
WP_076523567.1\|58756_59047_+	HNH endonuclease	NA	NA	NA	NA
WP_076523565.1\|59864_60068_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_076523564.1\|60258_60564_+	hypothetical protein	NA	NA	NA	NA
WP_076523562.1\|60644_60851_+	hypothetical protein	NA	NA	NA	NA
WP_076523560.1\|60908_61883_+	hypothetical protein	NA	NA	NA	NA
WP_172998881.1\|62086_62389_+	hypothetical protein	NA	NA	NA	NA
WP_159439663.1\|62827_63001_-	hypothetical protein	NA	NA	NA	NA
WP_076523554.1\|64021_64462_+	hypothetical protein	A0A0K2CNQ1	Brevibacillus_phage	1.4e-09	36.2
WP_143457030.1\|64613_64964_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_076523550.1\|64990_65437_+	hypothetical protein	A0A0F7L8S7	uncultured_marine_virus	7.5e-06	29.1
WP_076523548.1\|65460_65829_+	hypothetical protein	A0A0K2CZI8	Paenibacillus_phage	8.9e-05	31.6
WP_084189841.1\|65825_66095_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_076523544.1\|66089_66416_-	hypothetical protein	NA	NA	NA	NA
WP_076523542.1\|66500_66827_-	hypothetical protein	NA	NA	NA	NA
WP_076523540.1\|66922_67249_-	hypothetical protein	NA	NA	NA	NA
WP_076523539.1\|67324_69019_+	hypothetical protein	S5MBW5	Brevibacillus_phage	2.2e-18	46.9
WP_076523537.1\|69015_72408_+\|tail	phage tail family protein	NA	NA	NA	NA
WP_076523535.1\|72409_75403_+\|tail	phage tail protein	A0A0A1ELH9	Lactobacillus_phage	1.1e-28	30.3
WP_076523533.1\|75399_75684_+	hypothetical protein	NA	NA	NA	NA
WP_076523531.1\|75667_76063_+\|holin	holin family protein	D0R7H7	Paenibacillus_phage	6.8e-35	54.2
76890:76911	attR	NA	NA	NA	NA

DBSCAN-SWA_2

451257 : 461809

Cyanophage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009711134.1\|451257_452553_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	5.3e-20	32.6
WP_076525633.1\|452717_453437_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SJU7	Cyanophage	2.0e-48	45.0
WP_076525635.1\|453429_453681_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	1.8e-09	36.2
WP_009711137.1\|453683_454367_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_143457149.1\|454377_456642_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	4.3e-166	43.0
WP_076525637.1\|456611_458048_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	4.2e-50	33.5
WP_076525639.1\|458044_459079_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A1D7SR00	Cyanophage	1.9e-68	43.2
WP_076525641.1\|459075_459666_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.1e-28	39.8
WP_076525643.1\|460231_461809_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	6.8e-70	50.3

DBSCAN-SWA_3

522568 : 530138

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052529053.1\|522568_523414_-	YitT family protein	M1Q1P6	Streptococcus_phage	2.0e-36	31.1
WP_040388358.1\|523585_524206_-	uridine kinase	A0A1V0SAA3	Catovirus	9.6e-36	40.7
WP_076525697.1\|524582_526160_-	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	1.0e-182	58.0
WP_009711214.1\|526368_526743_+	S1 RNA-binding domain-containing protein	NA	NA	NA	NA
WP_076525699.1\|526857_528426_-	protein kinase	A0A1V0SDC3	Indivirus	2.9e-20	28.2
WP_076525701.1\|528540_529143_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	1.4e-26	36.5
WP_076525703.1\|529139_530138_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	1.8e-44	60.3

DBSCAN-SWA_4

682983 : 691587

Pseudomonas_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076525921.1\|682983_684135_-	hypothetical protein	A0A125RNN9	Pseudomonas_phage	6.0e-07	27.1
WP_076525800.1\|684149_685556_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	2.3e-61	34.8
WP_076525802.1\|685588_686266_-	lysophospholipase	NA	NA	NA	NA
WP_076525804.1\|686281_686926_-	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	2.2e-22	38.6
WP_076525806.1\|687110_688934_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.9e-32	32.5
WP_076525808.1\|688930_689608_-	response regulator transcription factor	W8CYM9	Bacillus_phage	6.2e-36	37.6
WP_076525810.1\|689794_690370_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_076525812.1\|690786_691587_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	2.3e-21	32.3

DBSCAN-SWA_5

962024 : 969608

Planktothrix_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009711679.1\|962024_963059_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.0e-15	28.0
WP_009711680.1\|963055_964069_+	ATP-binding cassette domain-containing protein	M1IB70	Acanthocystis_turfacea_Chlorella_virus	6.2e-08	24.7
WP_009711681.1\|964349_964571_-	NifU family protein	Q58MC7	Prochlorococcus_phage	8.5e-11	48.6
WP_076524433.1\|964813_965740_+	cysteine synthase family protein	A0A1X9I5F1	Streptococcus_phage	1.3e-73	47.0
WP_009711683.1\|965743_966877_+	bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	A0A0B5JD48	Pandoravirus	1.4e-19	29.2
WP_009711684.1\|966897_967230_+	YuzD family protein	NA	NA	NA	NA
WP_009711685.1\|967314_967923_-	class D sortase	NA	NA	NA	NA
WP_009711687.1\|968184_968445_+	YuzB family protein	NA	NA	NA	NA
WP_076524431.1\|968891_969128_+	Spo0E family sporulation regulatory protein-aspartic acid phosphatase	NA	NA	NA	NA
WP_076524430.1\|969251_969608_+	iron-sulfur cluster assembly accessory protein	A0A2H4N7M3	Lake_Baikal_phage	1.6e-19	45.2

DBSCAN-SWA_6

1213588 : 1223874

Saccharomonospora_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_076525178.1\|1213588_1217071_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	7.7e-223	37.9
WP_009711955.1\|1217107_1217626_+	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	4.6e-39	52.3
WP_009711956.1\|1217901_1218636_-	ABC transporter permease	NA	NA	NA	NA
WP_052528953.1\|1218654_1219362_-	ABC transporter permease	NA	NA	NA	NA
WP_172998952.1\|1219358_1220267_-	ATP-binding cassette domain-containing protein	A0A2H4PQG7	Staphylococcus_phage	9.8e-45	44.9
WP_009711959.1\|1220356_1221445_-	HAMP domain-containing histidine kinase	A0A1B0VMK3	Pseudomonas_phage	1.5e-07	25.0
WP_009711960.1\|1221441_1222164_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.9e-33	36.0
WP_084190079.1\|1222548_1223874_+	glycerate kinase	W6LM47	Streptococcus_phage	1.1e-39	34.3

DBSCAN-SWA_7

1708440 : 1718856

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052528600.1\|1708440_1709517_+	peptidoglycan DD-metalloendopeptidase family protein	A0A1W6JQH9	Corynebacterium_phage	3.9e-16	45.2
WP_009708444.1\|1709772_1710732_+	heme A synthase	NA	NA	NA	NA
WP_040387873.1\|1711135_1712236_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.6e-54	32.5
WP_009708447.1\|1712254_1712896_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	5.7e-31	36.7
WP_076522837.1\|1712882_1714082_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	3.3e-117	53.3
WP_040387874.1\|1714463_1714958_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.8e-38	60.7
WP_009708450.1\|1714974_1715766_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.4e-07	31.7
WP_052528602.1\|1715734_1716388_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.2e-16	32.7
WP_159439645.1\|1716494_1717184_+	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_009708453.1\|1717156_1717609_+	sporulation protein YtfJ	NA	NA	NA	NA
WP_009708454.1\|1717722_1718856_+	D-alanyl-D-alanine carboxypeptidase	B6DZZ7	Stx2-converting_phage	2.0e-26	30.7

Anti-CRISPR protein detection

Acr_ID: NZ_CP048103.1|WP_052528600.1|1708440_1709517_+|peptidoglycan-DD-metalloendopeptidase-family-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP048103.1|WP_052528600.1|1708440_1709517_+|peptidoglycan-DD-metalloendopeptidase-family-protein

1708440_1709517_+

358 aa aa

1708440-1718856

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP048103_17	Orphan	17.1\|3421713\|25\|NZ_CP048103\|CRISPRCasFinder	3421713-3421737	25	1714256-1714280	2

1. spacer 17.1|3421713|25|NZ_CP048103|CRISPRCasFinder matches to NZ_CP048103 position: 1714256-1714280, mismatch: 2

acctgggcgagacttgtgctggtga	CRISPR spacer
accctggcgagacttgtgctggtga	Protospacer
***. ********************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP048103

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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