CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP054038	Microbacterium hominis strain PA2F3 chromosome, complete genome	11 crisprs	csa3,cas3,DEDDh,WYL,c2c9_V-U4	3	4	0	0

1. NZ_CP054038

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054038_1

• CRISPR_ID: NZ_CP054038_1
• CRISPR_location: 203303-203383
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_1

Consensus_repeat	Method
GCCAGAACTGTTCTCGGCGAGGGGGA	CRISPRCasFinder

spacers of NZ_CP054038_1

>1.1|203329|29|NZ_CP054038|CRISPRCasFinder
CAGGGGTCACGCCGGATCACCTGTTCTCA

CRISPR arrays and Neighbor proteins around NZ_CP054038_1

CRISPR arrays

The CRISPR arrays of NZ_CP054038_1

>merge|NZ_CP054038|1|203303-203383|CRISPRCasFinder
GCCAGAACTGTTCTCGGCGAGGGGGACAGGGGTCACGCCGGATCACCTGTTCTCAGCCAGAACTGTTCTCGGCAAGGGGGA

>NZ_CP054038|1|1|203303-203383|CRISPRCasFinder
GCCAGAACTGTTCTCGGCGAGGGGGA	CAGGGGTCACGCCGGATCACCTGTTCTCA
GCCAGAACTGTTCTCGGCAAGGGGGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991431.1|198647_199511_-|VOC-family-protein	unknown	unknown	gnl|CDD|225312
NZ_CP054038.1|WP_172988500.1|204490_205993_+|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NZ_CP054038.1|WP_172988496.1|198235_198655_+|hypothetical-protein	unknown	unknown	gnl|CDD|227933
NZ_CP054038.1|WP_172988494.1|195607_197077_+|beta-glucosidase	unknown	unknown	gnl|CDD|274539
NZ_CP054038.1|WP_172988508.1|215742_216876_+|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP054038.1|WP_172988506.1|214649_214985_+|potassium-transporter-Trk	unknown	unknown	unknown
NZ_CP054038.1|WP_172988498.1|202173_202926_+|cytochrome-C-biogenesis-protein	unknown	unknown	gnl|CDD|223856
NZ_CP054038.1|WP_172988502.1|208049_211553_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|143443
NZ_CP054038.1|WP_172988495.1|197098_198112_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP054038.1|WP_172988499.1|203468_204383_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl|CDD|237571
NZ_CP054038.1|WP_172988497.1|200041_201373_-|nitrate-reductase	unknown	unknown	gnl|CDD|236744
NZ_CP054038.1|WP_172988507.1|215001_215607_-|zinc-binding-alcohol-dehydrogenase	unknown	unknown	unknown
NZ_CP054038.1|WP_172988505.1|214204_214573_+|hypothetical-protein	unknown	unknown	gnl|CDD|380033
NZ_CP054038.1|WP_172991432.1|201763_202174_+|thioredoxin-family-protein	unknown	unknown	gnl|CDD|239245
NZ_CP054038.1|WP_172988493.1|194632_195547_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP054038.1|WP_172988504.1|212872_214150_-|phosphoribosylamine--glycine-ligase	unknown	unknown	gnl|CDD|234856
NZ_CP054038.1|WP_172988501.1|207087_207987_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|176115
NZ_CP054038.1|WP_172988492.1|193598_194636_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP054038.1|WP_172988503.1|211651_212629_+|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|224523
NZ_CP054038.1|WP_172988491.1|192186_193458_+|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|224567

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991431.1|198647_199511_-|VOC-family-protein	gnl|CDD|225312	COG2514, COG2514, Predicted ring-cleavage extradiol dioxygenase [General function prediction only].	6.42448e-80
NZ_CP054038.1|WP_172988500.1|204490_205993_+|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.47059e-84
NZ_CP054038.1|WP_172988496.1|198235_198655_+|hypothetical-protein	gnl|CDD|227933	COG5646, COG5646, Uncharacterized conserved protein [Function unknown].	2.18934e-05
NZ_CP054038.1|WP_172988494.1|195607_197077_+|beta-glucosidase	gnl|CDD|274539	TIGR03356, BGL, beta-galactosidase.	0
NZ_CP054038.1|WP_172988508.1|215742_216876_+|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	1.79171e-159
NZ_CP054038.1|WP_172988498.1|202173_202926_+|cytochrome-C-biogenesis-protein	gnl|CDD|223856	COG0785, CcdA, Cytochrome c biogenesis protein [Posttranslational modification, protein turnover, chaperones].	4.50026e-08
NZ_CP054038.1|WP_172988502.1|208049_211553_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl|CDD|143443	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.	0
NZ_CP054038.1|WP_172988495.1|197098_198112_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.18898e-99
NZ_CP054038.1|WP_172988499.1|203468_204383_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl|CDD|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	4.83341e-164
NZ_CP054038.1|WP_172988497.1|200041_201373_-|nitrate-reductase	gnl|CDD|236744	PRK10720, PRK10720, uracil transporter; Provisional.	3.66303e-103
NZ_CP054038.1|WP_172988505.1|214204_214573_+|hypothetical-protein	gnl|CDD|380033	pfam17844, SCP_3, Bacterial SCP ortholog. This domain is found in MSMEG_5817 gene product from M. smegmatis. It has been shown to be vital for mycobacterial survival within host macrophages. Crystal structure revealed a Rossmann-like fold alpha/beta two-layer sandwich forming a highly hydrophobic interface cavity and with high structural homology to the SCP family. Hence, it has been suggested that this domain may be involved in the interaction of apolar ligands through its hydrophobic cavity. Alanine-scanning mutagenesis of the hydrophobic cavity of MSMEG_5817 protein demonstrated that the conserved Val82 residue plays an important role in ligand binding.	5.52873e-49
NZ_CP054038.1|WP_172991432.1|201763_202174_+|thioredoxin-family-protein	gnl|CDD|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	2.52837e-11
NZ_CP054038.1|WP_172988493.1|194632_195547_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.71885e-68
NZ_CP054038.1|WP_172988504.1|212872_214150_-|phosphoribosylamine--glycine-ligase	gnl|CDD|234856	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional.	0
NZ_CP054038.1|WP_172988501.1|207087_207987_-|LysR-family-transcriptional-regulator	gnl|CDD|176115	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold. LysR-transcriptional regulators comprise the largest family of prokaryotic transcription factor. Homologs of some of LTTRs with similar domain organizations are also found in the archaea and eukaryotic organisms. The LTTRs are composed of two functional domains joined by a linker helix involved in oligomerization: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal substrate-binding domain, which is structurally homologous to the type 2 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcriptional repressor undergoes a conformational change upon substrate binding which in turn changes the DNA binding affinity of the repressor. The genes controlled by the LTTRs have diverse functional roles including amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to a name a few. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.57889e-31
NZ_CP054038.1|WP_172988492.1|193598_194636_+|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.91583e-84
NZ_CP054038.1|WP_172988503.1|211651_212629_+|acyl-CoA-thioesterase	gnl|CDD|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	1.50943e-33
NZ_CP054038.1|WP_172988491.1|192186_193458_+|carbohydrate-ABC-transporter-substrate-binding-protein	gnl|CDD|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	5.87308e-23

Protein sequences

>NZ_CP054038.1|WP_172988498.1|202173_202926_+|cytochrome-C-biogenesis-protein
MLALTLVSFAAGVLTVLAPCVLPLLPVIVGGTAVRAGGGDAAAAERQWFRPLVIAAALAVSVVAFTLLLKATSALLGVPGWVWQTVSGVIVAVLGLSMLFPTLWERLTVAAGWQAGGGRLLDRGYRRGGLTGDIALGAALGPAFSSCSPTYALIVATVLPASFAAGVVYTTAYAVGLALALLAIAIAGTALVRRLGWLADPHGVFRRGMGGVLLVVGVAVALGWDRLLQAWILEQGWYGPIENLERMLLG
>NZ_CP054038.1|WP_172991432.1|201763_202174_+|thioredoxin-family-protein
MDDGTDDAAEESPAAEATPTPEADAPAPGATTAGSYVDYSESALASAEGTRVLFFHAPWCPQCRALESDIDAVGVPDGVTILKVDYDTSTELRQRYDVRLQTTVVALDDSGAATASFVAYDDPTLDAALTGLGIDG
>NZ_CP054038.1|WP_172988497.1|200041_201373_-|nitrate-reductase
MPTWTLHGNGRTVEPGKVVAPDERLNWGATVAVGMQHVVAMFGATFLVPLLTGFPVSTTLFFSGVGTLLFLLITRNKLPSYLGSSFAFIAPVTAATASQGMGSALAGIVAVGVLLAAVGFVVQFLGIGWIDRLMPPVVAGAIVALIGFNLAPVAWDNFQLAPVTATITLVAVVLFSVLFRGFLGRISIFLGVIVGYITALVRGEVDFSDVNALVADGQWFGLPTFQVADFASPGTWSVIAMFLPVVLVLIAENVGHVRGVATMTSRSVNRQTGRALIADGAATTLAGAFGGSGTTTYGENIGVMAATRVYSTAAYWVAGAFAILLSLSPVVGAIFNSIPAGVLGGVTTALYGLIGIIGIKIWVDNRVDFSRPVNQYTGAVALVIAIAGFTMQWGDFELGAIVIGSAAALLIYHLGNLIARWRKTGADDGGPIPAVGQLGGDPQ
>NZ_CP054038.1|WP_172991431.1|198647_199511_-|VOC-family-protein
MGAVTLLVGDLDAMTRYYREVVTLQVLGAEADTVTLGRAGLPIVVLRHDPALRHAPPGSAGLFHTAILFETQEALAAALYSVARHAPGTFTGSADHLVSQAFYFTDPEGNGIELYWDRARTDWSWVHGQVEMATLYLDPNEFLRSHLTEQASLGSTGGDAASVGHVHLSVGDVATARAFYVDALGFDETAALGNQAVFVSAGGYHHHMAMNVWNSRGAGPRMPALGLGRVDLALPGADALGELGERLRHHGFAVRDDGRALSFDDPWNNVLRAEAAPAPASAAPAVS
>NZ_CP054038.1|WP_172988496.1|198235_198655_+|hypothetical-protein
MAKASTGLSAEERAAVKERAKELKAAQDRASGEQAVAEKITEMPEADRVLAEKVSEIVAKVAPDLVPRTFYGMPAWSRDGKVVVFFKDAAKFKSRYATLGFEEAATLDDGEMWATSYALVGIGPDTEKQITALVERAIS
>NZ_CP054038.1|WP_172988495.1|197098_198112_+|LacI-family-DNA-binding-transcriptional-regulator
MSTHTVSGTVTIEEVAAAAGVSRSTVSRVVNGSTAVSPSALQSVQRAIAELNYVPNRAARSLASRQTHAVALIVPEDTTRFFGDPFFAAIVSGINARLSKSDYVLNLFIASDDPGDKTTSYVRSGAVDGAIVVSHHTSDTFIDRIAAAVPVVYGGRPVRERERDYYVDVDNVRGAHDATTYLIEQGRKNIATITGPLDMPAGVDRLQGYREALAAWDLPEGAIADGNFTADGGAVAMREILAAGERPDAVFAASDLMARGALSVLAAEGLRVPADVAIIGFDDSPVATSVTPQLTTMRQPSFAQGERMATVLLDLLAGKHPRHVTILETELIERDSV
>NZ_CP054038.1|WP_172988494.1|195607_197077_+|beta-glucosidase
MTSAVERAFPSNFLFGAATAAYQIEGAAHDDGRRDSIWDAFSRVPGAVINADNGDVACDHYHLYRDDVALMKQMGLQTYRFSTSWSRVRPDGGAVNPKGVDFYKRLVDELLGADILPWLTLYHWDLPQALQEKGGWANRDTADLFTEYALDMHDALGDRVNVWTTLNEPWCSSFLSYTAGIHAPGHFSIEEGLLASHHLLLGHGQAIRELRARDESLTLGITLNLTVADPVDANDPADLDAARRIDGQFNRWFLDPVFRGEYPADIVEDVRKVDAAAVASFEAAVQPGDLETIATPIESLGVNYYHGEYVGGHEPVDPPIGGDAPTDRPTGSPWPAGHDIYWHERGLPRTPMQWEVQPEGLTRLLERVWTEYAEPAGTVLYVTENGAAYDDVAVVEDGETRVHDDDRVEFVRGHLAAILDAQDAGVDVRAYFYWSMLDNFEWAWGYEKRFGIVRVDYETQERAVKDSGREYSRIIAARTLDVAPATVVA
>NZ_CP054038.1|WP_172988493.1|194632_195547_+|carbohydrate-ABC-transporter-permease
MSTTPPLAIVEQSIPNAAQRGSRKNRTTRIRGYRAGFWVYAGLAVVLVSAVFPYYWSLLIGSGDASTINDPNMSWFPGGNFLENAAAVVNDPAVGFWRALWNSIYSSTLIAASVVITSTLAGWAFAKLKFPGSKGLLVFVVATMAVPMQLGVVPLYILFADLGWTGSIGAIIIPALTSAFGVFWMTQYLQQTVPDELIEAARVDGATMMRTLWTVGVPAARPAAAMLFLFTFVGAWNNFFWPFIVLDRRDPTLPVALSLLQSNYFVDYSVVLAGVLLSTIPLLILFAFAGKQLVSGIMAGAVKG
>NZ_CP054038.1|WP_172988492.1|193598_194636_+|sugar-ABC-transporter-permease
MTATDTRPQAPAATPPQPQDKRVRVLSFSQKLSRWDLKVSPYLYISPFFVMFAVVGLFPIGYTAVISFMDWDLVRNSGEFIGFDQYAWILSNPQFWTALRNTFSIFLLSSVPQLILAIFIAAMLDKNIRAKTFWRTSVLLPYVMAPVAVALIFSNMYGDNHGLVNNVLADLGIPPVPWHKDPFWSHVAISTMVNFRWTGYNALILLAAMQAVPRDYYEAATVDGAGAFRQFWSITLPSLRPTLIFVIITSTIGGLQIFDEPRMYDNTGEGGAAQQWLTITLFLYNIGWREWNFGRAAALAWILFLIILVIGLINLMITRRLVRDEGGRGVVSPRKRLLGKKGSAR
>NZ_CP054038.1|WP_172988491.1|192186_193458_+|carbohydrate-ABC-transporter-substrate-binding-protein
MNSRAFRRSAVAVAAFSASAIVLAGCASGDSEGSASTDEEITLTVATFNDFGYTDELLQEYMDENPNITIEHTRAAESGDARANYFAKLGKGGLADIEAVEIDWFAEAMQYSDLLAEAPDSVKGRWLDWKEAAATDGDGRLVGFGTDIGPQGICYRADLFEAAGLPSDREGVAELFDGDWEHFLDVADQYREATGKPMVDSANSVLQGIVNQIEFTYTEPDGTVIATENPEIAEAYQLVTERGVPNAAYAGQWSDDWFASMANGEFATMLCPGWMLGVISGNAPDVTGWDIADVFPNGGGNWGGSYLTVPADGENVDAALALADWLTAPEQQMKAFANAGTFPSQLEALDSAELASATNEYFNDAPTGEILSSRAAGVTVAPYKDAEYFKYHDALQNAVTRVFDGVEDADTSWDTWVNEVGAF
>NZ_CP054038.1|WP_172988499.1|203468_204383_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTDSAASPAPLDLPGWRHIYSGKVRDLYVPADTPEGGAPARLLVIASDRVSAFDHVLSPGIPSKGELLTSLSGWWFDQLAGADGGRGIPNHLVAGAEAPDAVAGRAMVVKSLDMQPVECVVRGYLTGSGWVEYQESGTVCGIALPAGLADGDRLPEPIYTPAYKAPMGEHDENISFAQSVELVGAERAAELRDLSLEIYRRAAATAEARGLILADTKFEFGLDADGVMTLADEVLTSDSSRYWDAATWRTGTTPKERMASFDKQIVRDWLAANWDKQGTPPELPAEIVERTAARYRELIGLLTG
>NZ_CP054038.1|WP_172988500.1|204490_205993_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MSEPFTSTSTSPVKTRSAWPGLWALVIGFFMILVDTTIVSVANPAIKADLDPGTPNLDNIVWVTSAYLLAYAVPLLITGRLGDRFGPKNIYLIGLAIFTLASLACGLSDTLGMLIAFRAVQGVGASLMTPQTMAVITRTFPPNQRGAAMGLWGATSGVAMLVGPLAGGLLVDGFGWEWIFFVNLPVGIVGFVLAWMLVPRLETHPHRFDLVGVVLSAVGLFLIVFGLQEGETYDWGVIWGPITVWGLIISGVAVMGLFLWQQARTKSEALVPLELFRDRNFSIANLGIATVGFSVTSMSLPMMFFFQLGRGLTPTESALLLVPMAIAAGILSPLAGRLLDRSDPRLLLVPGLLLVAGSLVLYSVLMSPDTPVWAFLIPSFLMGVGNAGMWGPLATTATRNLAPRQAGAGAGIYNTTRTIGSVLGSAAIAVFMQARLEANLGAGADASGEGFGGGALPPVIAEPFSTAMAQSILLSAAVLVVGVVGVLFLRRPEGLGQPRS
>NZ_CP054038.1|WP_172988501.1|207087_207987_-|LysR-family-transcriptional-regulator
MLDLKRLRLLRELHMRGTLAAVADALSYSPSAVSQHLSQLEREAGVELVRRVGRGVRLTPAGEQLVARAEELLETMEQAEAELRAIGEGPSGTVRLAVFQSAMLALLPAALRAMREHAPRVRVEVYQREPESALRETWMREFDLVVAEQYPAHSAPHHSGLDRRALLTDRIRLAVGGELADPVRTLADTAELPWVMEPRGAASRHFAEQACRTAGFEPDVRYETADLQAHVRLVESGNAVALLPDLIWASADPRCALLGLAGAPRRTIFTSARRAGAEFPAVSTFRAALDQVASDLEVE
>NZ_CP054038.1|WP_172988502.1|208049_211553_+|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MKPDRTLDPSIPLGEPVSMTTDTTPDLANETVALVDRWLAEAAEIAPSVAAQRLAGVLSDPNGLDFTTGFVDGVVRPEDAAVAARALARVAPKVPGFLPAPLRGAVRLGGVAAPVAPGVVVPIARAVLRRMVGHLIVDARDARLGAAIRRLRRDGVRLNINLLGEAVLGAAEAQRRLDGTMRLLARDDVDYVSVKVSAMVGPHSAWGFEEAVESIIERLTPLYRLAAASPTPKFINLDMEEYRDLDLTMAVFTRILDQPEFERLEAGIVLQAYLPDAFDAMVRLQEWAAARRARGGAAIKVRLVKGANLSMERVDAEIHGWPLATWHTKQDSDTHYKRILDWSLHPDRIRNVRLGVAGHNLFDIAHSWLLATERGGTDGIEYEMLLGMAESLAEVIRREVGGLLLYTPVVHPREFDVAIAYLIRRLEEGASSDNFMSALFTLDSDPAMRARETERFLASLRTMDAAVPRTHRVQDRSTPAAGAPAGFENAPDTDPSVAANRSWGRQILARVPQSRAGVATADAAILSDAAAVDATLRTARAAAARWRELGAAGRAAILHRAGEVLERRRADLLEVMASEAGKTLDQADPEVSEAIDFAHYYAERALDLGAVDGARFTPASLTLVTPPWNFPVAIPAGSTLAALAAGSAVVIKPARQARRCGAVMVEALWEAGVPRDVLALVQLADAELGERLVASDAVDQVILTGGYETASLFRGFRKDLRLMGETSGKNAIIVTPSADLDLAVKDVVASAFGHAGQKCSAASTVILVGSVATSRRFRTQLVDAVRSLHVALPTDPTAQVGPVIAPPTGKLAEALTSLAPGESWLIEPRQLPEDPKLWTPGVRDGVRRGSEYHLTEYFGPILGIMTAATLDEAIELQNQVDYGLTAGLHSLDADEIRTWLARVEAGNLYVNRGITGAIVQRQPFGGWKKSVVGAGFKAGGPNYLMGLGRWSDSTVDLSRRPRTDSGPVAALMHAASEVLDADRLVWLMQALASDETAWAEEFGVHRDRTGLACERNVFRYLPAEAEIRAEARADVAEVVRVAAAALRAGATPRLSSARPLPTALATALRTAGIEVQVEGADAAHRRLAALPRPRVRLVGGSAAPLLRAAGGRPDLTIFDGEVTRAGRVEMLPFLHEQAVSITAHRFGNPTSLAYDVLPEPEAGVVRG
>NZ_CP054038.1|WP_172988503.1|211651_212629_+|acyl-CoA-thioesterase
MSVPASSSPDDRITMRFLSLPHDAAAGGATVAAGSVMEWIDQAGYACAVGWSGSYCVTAYVGNVRHASPIAPGSLVAVHARIVHTGTSSMHVAVTVESADVRERDFTPNTTCILVFVAVGDDRRPVKVPQWRPSSESDRALAAAAVSRIPARDGIKKAMLAEEYTDATAAPRSSLRFLAPPSSVNFGGAAHGGTVMRWIDEAGYACAASWSSADAVAVYSGGIHFLAPVRIGHIVELHARLIYTGPRSMHVAVRVLTADPRTPAETALTTQCLLVYVDRGDAGARPVRRWEPSLPEDVRLTRHAVDLIHRREQLVPIPAELTLRD
>NZ_CP054038.1|WP_172988504.1|212872_214150_-|phosphoribosylamine--glycine-ligase
MKILVLGSGAREHAIILALLSEEAGHEILAAPGNAGIANDATIVELDANDPAAVTSFALSDNIGLVVIGPEAPLVAGVADALRERGIPVFGPGKAAAQLEGSKAFAKRIMESAGVPTGRAVRAHTRAEVEAALDELGAPHVVKADGLAAGKGVIVTEDRAAALAHADTYLPSGSVLVEEFLAGPEVSLFFLSDGDRVLPLSPAQDFKRLGDGDSGPNTGGMGAYSPLPWLLERFGGEDAFVDLVTRDIAEPVIRQLDAEGTPFIGLLYAGLILTEAGVKVIEFNARFGDPETQVVLPRLVDPLSALLLSAASGHLEDHARPAFADAVAVTVVLASEGYPSSPVTGRALTGLDAAAGVDGVHVAHAATAAADSGDGLVATGGRVLNVVGVGTTFAEARSRTYSALEHIGLEGGQFRTDIAARVVES
>NZ_CP054038.1|WP_172988505.1|214204_214573_+|hypothetical-protein
MPRKIATDEGRAALAAVRAAAETGAEPARTDLAMSVRYLLQLLAEKAPGHTVEVRVPPFGAVQVVEGPRHTRGTPPNVVETDPRTWIALALGDERWVDAAAGGRIAASGIRADVSDLLPLRP
>NZ_CP054038.1|WP_172988506.1|214649_214985_+|potassium-transporter-Trk
MGEQIHDHIETVHVRRAPKFSVFLLTGAALGLLTAMILTFAFDGTSQVSPNTGLEYSQGQVFGFLALICVPVGLAVFGMLAVILDRRASAHTRDIEVDHATVETDELREND
>NZ_CP054038.1|WP_172988507.1|215001_215607_-|zinc-binding-alcohol-dehydrogenase
MGAAGTPEWLIREDASQPVLIALYLRQVLGIRSPDELPHLRGIPPRANDRSESVQDALERQWREYWAITVEPQAHPSPVPLDLVDGFGTHVVLPSTGAEQLRRAFAPHAAEAVAFAQSAHARYARDAATHSAYRAYASAIAEHERQVGRRAHSFELNVQVLPLNQRGVWWIGSLTVAVTDGLRGDVAAFDAAIHPIIAELA
>NZ_CP054038.1|WP_172988508.1|215742_216876_+|phosphoribosylformylglycinamidine-cyclo-ligase
MASPSRDASANPYTEAGVDTAAGDLAVELMKSAVRRTHGPEVLGGVGGFAGLFDASALRSYAKPLLATSTDGVGTKVAIAQAIDKHDTIGLDLVGMVVDDIVVVGAKPLFMTDYIACGKVFPERIADIVRGIAQGAAETGTALVGGETAEHPGLLGLNDYDVAGAATGVVEADAVLGAERVRPGDVVLALASSGLHSNGYSLVRHIAAGAGIQYGDNAADFGTTWGEALLEPTRLYTRPLLRLIAEIGDGVHSLSHVTGGGIAANLARVLPRGTWVDVDRSTWSPPPVFRVLADLGGLDLAATEGTWNLGIGFLAVVSADKADAATTALAGEGIATWQVGVVGDGPLPAGDFEQGAKGVDGGAVRLVGAYGTDNGAK

Crispr_ID: NZ_CP054038_2

• CRISPR_ID: NZ_CP054038_2
• CRISPR_location: 251324-251437
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_2

Consensus_repeat	Method
ATCTGCTGCTCAGGCCGCTGTTTGCGACAGCGGAGCAGCG	CRISPRCasFinder

spacers of NZ_CP054038_2

>2.1|251364|34|NZ_CP054038|CRISPRCasFinder
GGGGGTCGCTGTCGCACGCCGTTCCGCTGTCGCG

CRISPR arrays and Neighbor proteins around NZ_CP054038_2

CRISPR arrays

The CRISPR arrays of NZ_CP054038_2

>merge|NZ_CP054038|2|251324-251437|CRISPRCasFinder
ATCTGCTGCTCAGGCCGCTGTTTGCGACAGCGGAGCAGCGGGGGGTCGCTGTCGCACGCCGTTCCGCTGTCGCGATCTGCTGCTCAGGCCGCCGTTTGCGACAGCGGAGCAGCG

>NZ_CP054038|2|2|251324-251437|CRISPRCasFinder
ATCTGCTGCTCAGGCCGCTGTTTGCGACAGCGGAGCAGCG	GGGGGTCGCTGTCGCACGCCGTTCCGCTGTCGCG
ATCTGCTGCTCAGGCCGCCGTTTGCGACAGCGGAGCAGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172988541.1|261405_262734_+|MFS-transporter	unknown	unknown	gnl|CDD|340871
NZ_CP054038.1|WP_172988537.1|256350_257184_+|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl|CDD|238861
NZ_CP054038.1|WP_172988527.1|238788_239694_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP054038.1|WP_172988533.1|251487_252318_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl|CDD|223692
NZ_CP054038.1|WP_172991435.1|240670_241198_+|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|239646
NZ_CP054038.1|WP_172988538.1|257266_259918_+|DUF3516-domain-containing-protein	unknown	unknown	gnl|CDD|378795
NZ_CP054038.1|WP_172988524.1|235774_237223_+|cellulase-family-glycosylhydrolase	unknown	unknown	gnl|CDD|365907
NZ_CP054038.1|WP_172988539.1|259975_260512_+|DUF1697-domain-containing-protein	unknown	unknown	gnl|CDD|377954
NZ_CP054038.1|WP_172988535.1|254784_255825_-|pirin-family-protein	unknown	unknown	gnl|CDD|224655
NZ_CP054038.1|WP_172988531.1|243821_244985_+|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|173849
NZ_CP054038.1|WP_172988528.1|239675_240551_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NZ_CP054038.1|WP_172988540.1|260609_261407_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP054038.1|WP_172988529.1|241233_242316_-|radical-SAM-protein	unknown	unknown	gnl|CDD|275263
NZ_CP054038.1|WP_172988536.1|255833_256154_-|N-acetyltransferase	unknown	unknown	gnl|CDD|379642
NZ_CP054038.1|WP_172988526.1|238046_238709_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224228
NZ_CP054038.1|WP_172988525.1|237230_237935_-|hypothetical-protein	unknown	unknown	gnl|CDD|237030
NZ_CP054038.1|WP_172988532.1|245228_251285_+|hypothetical-protein	unknown	unknown	gnl|CDD|380190
NZ_CP054038.1|WP_172988530.1|242434_243496_+|M15-family-metallopeptidase	unknown	unknown	gnl|CDD|350624
NZ_CP054038.1|WP_172988534.1|254193_254745_-|ECF-transporter-S-component	unknown	unknown	gnl|CDD|378252
NZ_CP054038.1|WP_172991436.1|252314_254081_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213192

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172988541.1|261405_262734_+|MFS-transporter	gnl|CDD|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.86113e-17
NZ_CP054038.1|WP_172988537.1|256350_257184_+|SGNH/GDSL-hydrolase-family-protein	gnl|CDD|238861	cd01823, SEST_like, SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.	3.74166e-36
NZ_CP054038.1|WP_172988527.1|238788_239694_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.38612e-09
NZ_CP054038.1|WP_172988533.1|251487_252318_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl|CDD|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	5.97955e-27
NZ_CP054038.1|WP_172991435.1|240670_241198_+|NUDIX-domain-containing-protein	gnl|CDD|239646	cd03674, Nudix_Hydrolase_1, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity. They also contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, U=I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	1.30233e-27
NZ_CP054038.1|WP_172988538.1|257266_259918_+|DUF3516-domain-containing-protein	gnl|CDD|378795	pfam12029, DUF3516, Domain of unknown function (DUF3516). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is typically between 460 to 473 amino acids in length. This domain is found associated with pfam00270, pfam00271.	0
NZ_CP054038.1|WP_172988524.1|235774_237223_+|cellulase-family-glycosylhydrolase	gnl|CDD|365907	pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5).	1.20588e-28
NZ_CP054038.1|WP_172988539.1|259975_260512_+|DUF1697-domain-containing-protein	gnl|CDD|377954	pfam08002, DUF1697, Protein of unknown function (DUF1697). This family contains many hypothetical bacterial proteins.	3.35086e-37
NZ_CP054038.1|WP_172988535.1|254784_255825_-|pirin-family-protein	gnl|CDD|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	5.33484e-52
NZ_CP054038.1|WP_172988531.1|243821_244985_+|acyl-CoA-dehydrogenase-family-protein	gnl|CDD|173849	cd01160, LCAD, Long chain acyl-CoA dehydrogenase. LCAD is an acyl-CoA dehydrogenases (ACAD), which is found in the mitochondria of eukaryotes and in some prokaryotes. It catalyzes the alpha, beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of LCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. LCAD acts as a homodimer.	1.01342e-124
NZ_CP054038.1|WP_172988528.1|239675_240551_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.00141e-06
NZ_CP054038.1|WP_172988540.1|260609_261407_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.4837e-13
NZ_CP054038.1|WP_172988529.1|241233_242316_-|radical-SAM-protein	gnl|CDD|275263	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B. Members of this family are the downstream member (B) of a pair of tandem-encoded radical SAM enzymes. Most of these radical SAM gene pairs have an additional upstream regulatory gene in the MarR family. Examples of high sequence identity (over 96 percent) from cassettes in several Treponema species of the oral cavity to those in multiple Firmicutes in the gut microbiome suggest recent lateral gene transfer, as might be expected for antibiotic resistance genes. The function is unknown.	1.42201e-22
NZ_CP054038.1|WP_172988536.1|255833_256154_-|N-acetyltransferase	gnl|CDD|379642	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase. This family of GCN5-related N-acetyl-transferases bind both CoA and acetyl-CoA. They are characterized by highly conserved glycine, a cysteine residue in the acetyl-CoA binding site near the acetyl group, their small size compared with other GNATs and a lack of of an obvious substrate-binding site. It is proposed that they transfer an acetyl group from acetyl-CoA to one or more unidentified aliphatic amines via an acetyl (cysteine) enzyme intermediate. The substrate might be another macromolecule.	1.74065e-23
NZ_CP054038.1|WP_172988526.1|238046_238709_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	6.69622e-06
NZ_CP054038.1|WP_172988525.1|237230_237935_-|hypothetical-protein	gnl|CDD|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	8.77672e-05
NZ_CP054038.1|WP_172988532.1|245228_251285_+|hypothetical-protein	gnl|CDD|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	0.00675018
NZ_CP054038.1|WP_172988530.1|242434_243496_+|M15-family-metallopeptidase	gnl|CDD|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	6.6588e-57
NZ_CP054038.1|WP_172988534.1|254193_254745_-|ECF-transporter-S-component	gnl|CDD|378252	pfam09819, ABC_cobalt, ABC-type cobalt transport system, permease component. Members of this family of prokaryotic proteins include various hypothetical proteins as well as ABC-type cobalt transport systems.	4.86388e-11
NZ_CP054038.1|WP_172991436.1|252314_254081_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	1.08923e-78

Protein sequences

>NZ_CP054038.1|WP_172988532.1|245228_251285_+|hypothetical-protein
MAWSAACALLAGMLVVAPAATPPAEAATLNVGPISAQFSGTRGTDGSNSSNRDECIRYAPAGTGGTTSLVGPGQEALTAHGHASGNRCPDQLSTRIQSAIGFTPSTTQTAQDGDTFLIGRFTHYNNVVSGSRGGAKHFEGSLRVQMGGFTPLQPTTFPWMLWETPNGDRPCAFLNGPNDRGCADEIRFTNQIADQVFDQQGFQYKLVVSGFIPTSAAACPATPAGSAVNRFLTRESANSAACLYASLVQRRELTIVKQVAAPAGTTIPAFAYTGTSDLAGSPWATKKFSLTPGVGTSDSEGPVQLLRGETVSVTEAPVSDEWSTTSIECLDTAGNPVPEASYDLDAGKLTLDAVGAPPTTDALGIVCTYTNTFTPKASLTLVKQVDGGDASPAAWTLSAVGPDSIGGASGSAAVTSRRVAVGTYALNEAGGPTGYSAGTWSCENGSITGSRVTLERGANAVCTIVNTSAPPTGSLTVTKAITGPDGGFTGDDATPFHGAYRCDGADAVAFTVSRGTPFVSPPLPAGASCVVTETPPTGSLLDGSFSWQPAAFVPTSATAEIPSGGTATVAITNSFIQRGSIEVRKIVEPRPGTPAVGYTGGAARVFPVTYECTLGGVTVAGGALELTTTGSAIVWDLPTGASCAFDETLAPAAGDFANDTYQWDGSSWSEQTVPVPGSTTPASTTLTNFFTRLTGELVLTKNVLGDGFTGGTSAVFEIAYDCGAGFSGTRTLAAGASTTVTGIPAGTQCRVTETAPTGNLQTGYEWALPVYDGLVGGVVTVLAGGSSTVAVTNRPVRQYGELIVGKQITPAELRGGVLASARFEVMVTCDQPAQGQASPYSATFSLAVDASATTPRLPIGTQCDVTETAPAQALLVDESYSWGATPAAQTVTVDSTAEAVFAAVVNSVQREVGSFQVRKQVNGIGPADGAQTTFSGTWSCQYGTDTPLTGEWSVTGAGDAVMTGPATAIPLGSICIATEEAIDPAVPIEGDPAFIWGGTDIDGPLTLTAAAPNGASTVENNVAEVDGAFSISKKVKGGKEGAQFTGTFTFEYSCLAAAGGTFTGSVVVAAGATADVSAIPAGSECTITETAKGAEIDPYRWTDLVGFSLLGATPTNTTDTSVTFLIPDDGSHVAVRATNDIVRVTVPVSVQKLLDPDTPGGVVTGGGLFPISLVCGAETFGPYQLTIGQSVSVPVPLGATCEVAEGAVPATQGLAAGWIWNASPVLSAQVTIADENGTYAASVTNAPERQFGRLRLVKVVDEGAYPGTVDPGIEYEGTWSCVYPGEQPVTGTWSVEGPGEATLVGVPAAGIAAGSTCTPTEETPDEPTLGADPSFTWALPPTLDAASIGAGETGTMQVTNILQRDTGQISARKVITGETAGYTGGADLVFPIDFSCTTPAVEGEYIGRGLFAASTDPDAAPTVFTAAIPNGWECTFAEGAVPDGLLRDASFAWGAPVIGPAVVTVDGTDTPTVTVTNPIVRRIGTFTVFKSFTAVVPESATTGAFSGTYSCVYGEGESFEQTFSGTWTANPTGPDGAQATLDPVPTLPIGSECSLTETAPTTAEAPLPDASYRWGAPAIPDPVTIAQGVPSTMPVINTTERVYGAAQLQKAYTGVDGALLPGTVVTGTWSCEYGGAEVADGVWELPASGGTVSLFGATDQVPVTATCVVGEDTLDDADLVDASFTWNRPVLSPESGEFTATEQTTAVTVTNSTTRAFGPFEITKRVTAPEGVPVETGLVFDGTWRCQYGADGPVAEGQWSVIGEGTYRVDGILVGSACTIEENSQRAAAPVPTDFSYVWNAPVITAPQPVAREGEAVANGTVDNPVRRVLTGFSISKIGLVPGGTAPSGALFTFDWSCVSESGEVYEGTREIGPGGTTRIADIPASSECTVTEREPAAAGGLDWAFRDWTLSGVADAVLSVSGRSLVFAMQDPQPDLEMADVVVAATNTATPQQGPTPPITPTPTPGQGPTPTPTPGTALPPTGLPDTVWTIAWAGFLAMLAGAVAFGFASRRRIVRR
>NZ_CP054038.1|WP_172988531.1|243821_244985_+|acyl-CoA-dehydrogenase-family-protein
MERDIYDEDHEAFRDVVKEFIKRYAGDDKRKEWDAAGEVDRETMLAAGEAGIIGLSVPEEFGGAGMLQDYRFRAIVLEEVIAAGQGSLAGALGIQDDLAVPYIAHMGTQEQKQKWLPRMATGEILGALAMTEPGAGSDLRGIKTTAKKVDGGYLVNGAKTFISSGKTADIVVTFVKTGEGTRPDAFSLLILEDGMEGFDHSKKLEKMGFHGWDTAEMSFQDVFVPEENLIGGKEGLGFIQLMMNLPLERLSIGVAAAAAGEAAFHWTRDYVISREAFGERIADFQNTRFALADMATTVDVMWAYIDRAMMLYKDEKLTAEEAAKVKFWATDREAELLDVGVQLHGGYGYITEYPIARAYLDARVHRIYGGTNEIMRDLVSRQIVGKR
>NZ_CP054038.1|WP_172988530.1|242434_243496_+|M15-family-metallopeptidase
MADTRQIAGEVDASPRRRARSEALLRDEVTPVRHARRRRAARIAAVFALVACAALVAGGAAAVTGAISAPALAEEERLAAAEAEIEARIDEPPLPAPAESIPAPSLAAVAPLADLCAAPEVADALAAGDDAAAIAAGGGGEALRAAVVEGRAPCIALDDSARLWSVINKVRPHDPVDYRPSPLTMPDGVRNLAGGALRADAAAALTRMVAAAREEGAGEIALASAFRSYTTQQGSYGRQVSSRGVEGADLVSARPGHSEHQSGLAADVVACSGGCGSLDDLAGTAQGDWIVANAWRFGWIVRYEADRTPITGYLPEPWHLRYIGPQLAEAYHAGGWHTLEEFFALPAAPDYFG
>NZ_CP054038.1|WP_172988529.1|241233_242316_-|radical-SAM-protein
MRWQGQQLGAVDAAALPGLEQLNSLVRSVTTPEFADVTFHEVLCKSALNHVPGPSAMPFDWTINPYRGCSHACSYCFARSTHEYLELDAGRDFDTQIIVKVNIEEVLRRELARGSWQRDPVQLGTNTDPYQRAEGRYALMPGIIGALAESGTPFSILTKGTLLRRDLPLLQDAARSVDVSIAMSISVFDDELQKAVEPGTPSAAARLATVRAATDAGFRVTVFLMPILPHLTDSITAIDHALARIKEAGAVRVVYGALHLRPGAKQWFLEWLGQRHPELVSSYRGLYPGASAVAPKAYRSWLAKRVRPLLRVHGLDGSAEEESHPRDASARAGLASRAAASAVVTTSRGRTATATTPRLF
>NZ_CP054038.1|WP_172991435.1|240670_241198_+|NUDIX-domain-containing-protein
MSLALAAAVLEPAQADRYRAFLDEAGEAALHRDGGREHVTASCFVFSPGFDRVLLCLHRKGGFWVQFGGHLESIDAALADAALREAREESGVEAIALLSTQPVDLDRHELSAGFGWCAAHWDVGFAAVVAPDAVPTASDESDDVAWFDVDAVPAAVPTGFVVRLRNVLDLVRRLG
>NZ_CP054038.1|WP_172988528.1|239675_240551_-|hypothetical-protein
MDDGTLAELRALRERAYGPDADIFDDDTAFRRLQELEHRSLARASVSTVDGAASGSLATLVAEPADAAPAFETPVDAAPADPARAASGRDVGPAAADAADAADAADAADAATAPAAATAPAPDAAVDGDPAGAASLPDEPGPARRRLWLWWALSLIATALVAALITVWIMSPAGRVASLGVDDDVPWPRDVFGDAPDGAELYEDFLGITPVLLPLQLEGSQPPAPCIYLITTGDAAGFIAGGGCSAGQFPATAAMMVGENSPDRLREEYPLGSSLQFVLDGSRVVVYAQTP
>NZ_CP054038.1|WP_172988527.1|238788_239694_+|alpha/beta-hydrolase
MMAAAGAAVRGAGTVSPEWGGALALKMFARIERPRPLSATDEPTMLQARRSTVRVPGLDRRGTDLAVYDWGYGNDVVALAHGWDGRASQFTTLVRELVADGRRVVAFDAPAHGASPGRAAYVRDWVDALAALQARHGRFRAVVGHSFGGLAALIAVGQGGIGADRVVTVSAPADPAVLFARLRGALGYDERVDAALRARFARRYFPGEPDPIERLSPLRVPLPEDTRLLAVHDERDPLMPVAEVARIAGAHAGARVVLTSGLGHNRILAADEFLDAVMDFVAHPADVVEPVAPGATQGVWA
>NZ_CP054038.1|WP_172988526.1|238046_238709_-|TetR/AcrR-family-transcriptional-regulator
MVQEVRDGRRARGDESRRAILARAVDAASVNGLDGLTIGSLADASGHSKSGIATLFGSKEQLQLATVSAAREIFIDTVVTPARTRTERGLARVVELISTWIAYSDVRVFRGGCFFAAASVEFDAKPGAVRDAIIAANTEWEQYLTASIRSAMDAGELPGLDDPAQLVFELLSFLEAANTRSLMQGSSAPYARAATAVRTRLLALGADPDVVAGIGERTAA
>NZ_CP054038.1|WP_172988525.1|237230_237935_-|hypothetical-protein
MDEGSLVELRALRERAYGRDADIDDPADLERLRELEERSRASVAVAAERPGDTTGASAPAAPAPAAPAPAAPAKGEETPAATAASPGPRRRRAWWWALSLVVTAVTASLVTAWLLAPDARVASLEIDRETPWPTHVLGDRVSNSAVYEPFHGVSPIAVFEGPQAPAPCLYLVTWFAGGAEFLSRGSCTVGGFPATVALTVDASSPDELRDAFGLGTSVQFVLDEARVSVYVDAP
>NZ_CP054038.1|WP_172988524.1|235774_237223_+|cellulase-family-glycosylhydrolase
MIPPRASLALGLAALVVVGGVAAAVRTPGPASAEAFLTDAEGRALVPSGFNTASSSKQVASGLPDFTEDDLDTEYADMGTNFVRYLISWRKIEPEPGVYDQGYLDDVEERIGWYADRGYHVMLDMHQDLWGNAITPSGMNGNGAPAWATYMDGLPVAESLPMWELYYLEPGVIRAFDNFWNTTGAHPELMDHYAGAWRAVAARFADNEAVVAYDLMNEPYGGTVQGPAFEAGPLTALYQKSVDAIREVDDDTWACLEPQALGFNWGLPSGLGFVDDPRDGAARIAFCPHIYPLPMDLGDGFAGVSRDLVEGTVAAWRSNALRTAQALGGVPVILGEFGLNTELPGAIDYVELMYETSDASGFGVVYWSRDPGSWGPYDAEGEPRNLVEAVSRPYPRAVAGDLRSWEVGPDVLTIRLGAAGGGDIDGGRSGGGAAVSEAYLPADGFPDGAEITGGEIVAWDAATGVIGFTIDSGATEIVIRAR
>NZ_CP054038.1|WP_172988533.1|251487_252318_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MTSVAAEPAPTTDPYATTVAASPVRFLYRLNPLAKLAAPIPAMLLLVFVRDLATPAAFLALAYAVMLVGISLTWRFAAVLLALPVGAALIGFGFSLWTDPSQVDQSVVIWQLGGWTLYGGALEVGFATGLRLAAIVALTFIAGLSTTGPDLVRASVQQLRVPYRIGYTALAAFRFVPRFAHELDVIRQAHRVRGAHGGRGPFAATARWFGYVIPLLAGAIRHAERVALAMDSRAFGAFPDRTERHLVPFRARDVGFIVAFWLASASLFWFLFAWGP
>NZ_CP054038.1|WP_172991436.1|252314_254081_-|energy-coupling-factor-ABC-transporter-ATP-binding-protein
MRSAITSPDPAQAHTPLVRLVDLAITHDGETVPSPASVSFELGVGEVVLLLGPSGSGKSTLTLALNGLVPHAVPASIHGSVQIDGVDTRATTVAALSTRVGMVFQDPDAQLVTGTVLDEVAFGVENLRMPVPDVLSRAEVALRRVGLWERRSENPDRLSGGGRQRLAIACALAMGSPLLVLDEPTANLDPRGIEETYAALADLVAAGDRAVLLVEHNLDAAVGFVDRVVVLDQDGRLAADGTVDDVLRARADELHDLGVWLPVSALAALRLRRARYALDPLPLTPDELRAALEAAPPAAHPDPERAQRDEGPRAEAAPEAPPLIAVRDLTLRRGRTEVLHHVDLDIARGDFVAIVGANGAGKTSLIQAIAGVVPVPRGAVHLDGLDVGRTDARTLSRRVGFVFQNPEHQFIAHTVFDEIAHGLRLQHLPDDEVRTRTDALLDRFGLSHKAGTHPFLLSGGQKRRLSVGTALVAGADVLVLDEPTFGQDRARADELLSLLGELNAEGTTIVIVTHDMQLVTEHARSTVVVVDGTVLAAGATADLFADDALIERAGLRPPPLRRALGAVTRHPELARVTRLADLPAEASA
>NZ_CP054038.1|WP_172988534.1|254193_254745_-|ECF-transporter-S-component
MAPSSRLSTRLLLTCAAIGVATGVLQAIAGAVSGPVSAALPLVYGLVLGVHVLPGVIAQEVLRAPWVALITHMIAALVASAVVPLWIGRYIGTALLIGLLQEGVAALTRYQRWEPWRFFLSGIIVGAVIATAIWFAADVARFPLWGQIVYVALFLAGPMVWTAVGLAVGRGLRRAGVARAPQR
>NZ_CP054038.1|WP_172988535.1|254784_255825_-|pirin-family-protein
MTRLDTDDAVAAESPADCDGPRALLLEAREVPLGGVRAMEVHRALPQRDLPLVGAWCFLDRFGPQRTRMRVEPHPHIGLQTVTWPLVGEVRHRDTLGSDVVVRRGALNLMTSGHGIAHSEYSLGEEEVPLDALQLWVALPESRRHGAPDFERHENLPLVVLPEVDAAGSGIPNPDAEAPGAEAIVVVGEFAGASSPATMHTPIVGAEIALPAGSRVRLPLRPEWEHALVGVTGEVSVHTGDPSIPDLAPDTPLDPSHLLYLGRGRSHVEVAATSDAALFLLGGEPFEDDIVMWWNFVGRSHEEIVAAREAWEADEPRFGHVIDHGPERIPAPPMPAVRLTRRRRRI
>NZ_CP054038.1|WP_172988536.1|255833_256154_-|N-acetyltransferase
MTEFEEQLTVTRNDDAGRYEIHVGDVLGGFTEFHPDDQGRLVLPHTVVDPAFKGRGLGTVLVSEALADVARRGETIVPRCPFVVKYLRENTVEGLQVDWPGHVRVG
>NZ_CP054038.1|WP_172988537.1|256350_257184_+|SGNH/GDSL-hydrolase-family-protein
MRRRIVALMAALGLAISVSVAAAPAATAVSNTGASYVAFGDSEAAGTGNLFYVERGTCLRSRISYPLILGGTSYACASVTTDGTIAQVHAAAAAGKLGGNTKLVTVTAGINNLPWQQTLLTCAQAGPEVCQQAVAALAPQFATVAPGVAGIVATVRGYAPNAKILVTGYPQLFGDVTTSCRVGFLNGSAITVPAATTALANAAVDTLNQTIVGGLSIVGDPNTVYVDLAARFDTHGLCDTRTPWVNGVIGLPVLSDGSLHVNAIGQFAIAATVRSMR
>NZ_CP054038.1|WP_172988538.1|257266_259918_+|DUF3516-domain-containing-protein
MGQTRRVSASLLDLVPRGADADAAYLGFVEWAASRGLNLYSAQDEAIIEIVSGANVILSTPTGTGKSLVAVAAHAAALAAGGGRTYYTAPIKALVSEKFFALAEIFGAENVGMVTGDSSVNPEAPIVCCTAEILANLALRQGAEADVAQVVMDEFHYYGDPERGWAWQVPLLVLENAQFVLMSATLGDVTAIAEDLSRRTGRPTAQVTGVERPVPLHFSYERRPAHEVVETLLEGGESPIYIVHFSQAAALERAQALSSVKITTREQRDAIAEAIGGFRFTTGFGKTLSRLVRAGIGVHHAGMLPRYRRLVETLAQRGLLRVICGTDTLGVGINVPIRTVMITALSKFDGTKMRQLSAREFHQVAGRAGRAGYDTYGNVVVMAPEWEIENEAALRKAGDDPAKRKKIVRKKAPTGVVNWGMGSFERLVAAQPEPLVPQLQLSAAMLINVIGRGGDVFADVRSLVFDNHEPRARRYELARRAIAIFRTLVAAEIVQVDRTTSPAGIHLTVDLQPNFALNQPLSPFALAAIGILDPAEGAGSRAAPVHNSGETAGFGAGGTESSGIGQNLRSSAHPRSVGTGHYALDVVSVIEATLDNPRAILSQQEFKARGEAIGAMKQEGIEYEERMALVEEVTYPKPLEELLGEAFETFASSQPWVRDFELSPKSVVRDMFERALSFGEFVSLYQLVRSEGLVLRYLSDAYRAIRQTVPAEARTDELLDVIEWLGELVRQVDSSLVDEWSALVNPADDPDEPVVPPAPPSILTNRRAFTVLVRNEMFRRVQLAALQRDDELVELDPDVDWPGVLDRYFDDHDEILTGGPARSPRLVTIDESAAAGGEGMWRVEQIIDDPAGDHDWRIRAEVDLAASVEAGSAVVRVVEVLRL
>NZ_CP054038.1|WP_172988539.1|259975_260512_+|DUF1697-domain-containing-protein
MPTYLAFLRAINLGPNRKFPKADIVRAVEAAGMTNVQTHIASGNVRFDTAMRSRERIASALEAAFAADRGFEVPTIVFRADEFAAIAADAEKLGAENPGVARHYVYLLKHEPTAETVARVAATATDAGEMVIRGRAAHALLQPGYQDGQVDPLGAAKLLEPATNRNAGVVVAIAAKWC
>NZ_CP054038.1|WP_172988540.1|260609_261407_-|TetR/AcrR-family-transcriptional-regulator
MTPSSCDPSTQLRVVEGRSLSLNVTAVVSFQERVTNLVTLGNRRTRDERLDHVSTNGTDSAVTPAAASSTRRGRRGPYASTPARRAQIVRAALASIAEHGYERASLRDIAARADVTHAALLRHFASKDDLLLAALAQRDIDDEEFARHIMESRVPAERVLSGVLADEFAHPERQRNWLAITVAATNPEHPAHDFFVARRARMRAHFSSGRFGTAEDGEELTADEKVTMLMAMIDGLRIQALMDPEQDVLPLLEVFMRLISAPATD
>NZ_CP054038.1|WP_172988541.1|261405_262734_+|MFS-transporter
MVTNHTSDAAATAVPAGEPQIADAAGALGAEPLQPISRSYIFWLMLASFGVSMAMMVPLAYGLAVRISELAPGHEEVLGYITGTAQAVYLIVSPLIGIWSDRTRSRFGRRTPFIYLGIVIGLLGLVVISFAPNLLIVGAGWILGMSGWSIAGAPLQLLMADKLPEQQRGKVSALTGLMTQIAPVLGIGVAYAVSSNTTLVFLVPAIIGAVMLAIFPLIKPEGSSKDLPRADRVTAKSMITSYGFNVRKYPDFAWNWLGRFVFFVGLYFNTTFGTFFYAQRLDLPVREVAGIVATVGMIGVLAAAAGALVGGFLSDKLQRRRLFVMIASLLFVAGAVVEATAWSLPQIIIGAVLMQLAIAVFATVDQAIIYAIIPERDQAGRYMAIVQFAQKIPSAVAPLLAGVVITIGAVGGDKNYTLLYLAGAVFALIGGLIILLKVKSVR

Crispr_ID: NZ_CP054038_3

• CRISPR_ID: NZ_CP054038_3
• CRISPR_location: 340520-340664
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_3

Consensus_repeat	Method
TTTGCTGAGATCAGGTGTTTGCCGCCTGCGGTCCG	CRISPRCasFinder

spacers of NZ_CP054038_3

>3.1|340555|75|NZ_CP054038|CRISPRCasFinder
GTGCCGTTTGCTGAGATCAGGTGTTTCGGTGCCCGTTTGCTGAGATCAGGTGTTGCCGCCTGCGGTCCGCTGCCG

CRISPR arrays and Neighbor proteins around NZ_CP054038_3

CRISPR arrays

The CRISPR arrays of NZ_CP054038_3

>merge|NZ_CP054038|3|340520-340664|CRISPRCasFinder
TTTGCTGAGATCAGGTGTTTGCCGCCTGCGGTCCGGTGCCGTTTGCTGAGATCAGGTGTTTCGGTGCCCGTTTGCTGAGATCAGGTGTTGCCGCCTGCGGTCCGCTGCCGCTTGCTGAGATCAGGTGTTTGCCACCTGCGGTCCG

>NZ_CP054038|3|3|340520-340664|CRISPRCasFinder
TTTGCTGAGATCAGGTGTTTGCCGCCTGCGGTCCG	GTGCCGTTTGCTGAGATCAGGTGTTTCGGTGCCCGTTTGCTGAGATCAGGTGTTGCCGCCTGCGGTCCGCTGCCG
CTTGCTGAGATCAGGTGTTTGCCACCTGCGGTCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991446.1|328749_330651_-|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|143395
NZ_CP054038.1|WP_172991449.1|339323_340469_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|133062
NZ_CP054038.1|WP_172988578.1|327127_328687_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223587
NZ_CP054038.1|WP_172991450.1|345824_347510_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|234679
NZ_CP054038.1|WP_172988583.1|340867_342049_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235627
NZ_CP054038.1|WP_172991448.1|334825_337918_+|S8-family-serine-peptidase	unknown	unknown	gnl|CDD|173800
NZ_CP054038.1|WP_172988588.1|347560_348742_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl|CDD|180720
NZ_CP054038.1|WP_172988590.1|349582_351181_-|Na+/H+-antiporter-NhaC-family-protein	unknown	unknown	gnl|CDD|224671
NZ_CP054038.1|WP_172988584.1|342047_342401_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988581.1|338002_338863_-|tryptophan-2,3-dioxygenase	unknown	unknown	gnl|CDD|188272
NZ_CP054038.1|WP_172988580.1|332354_333617_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|226363
NZ_CP054038.1|WP_172988577.1|324088_325099_-|malate-dehydrogenase	unknown	unknown	gnl|CDD|235468
NZ_CP054038.1|WP_172988589.1|348888_349464_+|dihydrofolate-reductase-family-protein	unknown	unknown	gnl|CDD|334719
NZ_CP054038.1|WP_172988579.1|330778_332218_-|MFS-transporter	unknown	unknown	gnl|CDD|379134
NZ_CP054038.1|WP_172988585.1|342553_344350_-|hypothetical-protein	unknown	unknown	gnl|CDD|293789
NZ_CP054038.1|WP_172988591.1|351357_353454_+|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl|CDD|273919
NZ_CP054038.1|WP_172988582.1|338908_339172_-|NrdH-redoxin	unknown	unknown	gnl|CDD|131255
NZ_CP054038.1|WP_172988587.1|345257_345770_+|ACT-domain-containing-protein	unknown	unknown	gnl|CDD|225337
NZ_CP054038.1|WP_172988586.1|344568_345228_+|DUF305-domain-containing-protein	unknown	unknown	gnl|CDD|367619
NZ_CP054038.1|WP_172991447.1|333603_334629_-|hypothetical-protein	unknown	unknown	gnl|CDD|238624

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991446.1|328749_330651_-|aldehyde-dehydrogenase-family-protein	gnl|CDD|143395	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.	1.62653e-18
NZ_CP054038.1|WP_172991449.1|339323_340469_+|glycosyltransferase-family-2-protein	gnl|CDD|133062	cd06442, DPM1_like, DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.	1.9362e-74
NZ_CP054038.1|WP_172988578.1|327127_328687_+|DEAD/DEAH-box-helicase	gnl|CDD|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.08942e-113
NZ_CP054038.1|WP_172991450.1|345824_347510_-|glucose-6-phosphate-isomerase	gnl|CDD|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP054038.1|WP_172988583.1|340867_342049_-|SDR-family-oxidoreductase	gnl|CDD|235627	PRK05854, PRK05854, SDR family oxidoreductase.	1.40867e-87
NZ_CP054038.1|WP_172991448.1|334825_337918_+|S8-family-serine-peptidase	gnl|CDD|173800	cd07474, Peptidases_S8_subtilisin_Vpr-like, Peptidase S8 family domain in Vpr-like proteins. The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	5.55866e-44
NZ_CP054038.1|WP_172988588.1|347560_348742_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl|CDD|180720	PRK06836, PRK06836, pyridoxal phosphate-dependent aminotransferase.	3.09221e-97
NZ_CP054038.1|WP_172988590.1|349582_351181_-|Na+/H+-antiporter-NhaC-family-protein	gnl|CDD|224671	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion].	1.66202e-69
NZ_CP054038.1|WP_172988581.1|338002_338863_-|tryptophan-2,3-dioxygenase	gnl|CDD|188272	TIGR03036, trp_2_3_diox, tryptophan 2,3-dioxygenase. Members of this family are tryptophan 2,3-dioxygenase, as confirmed by several experimental characterizations, and by conserved operon structure for many of the other members. This enzyme represents the first of a two-step degradation to L-kynurenine, and a three-step pathway (via kynurenine) to anthranilate plus alanine. [Energy metabolism, Amino acids and amines].	2.89602e-153
NZ_CP054038.1|WP_172988580.1|332354_333617_-|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl|CDD|226363	COG3844, COG3844, Kynureninase [Amino acid transport and metabolism].	1.10504e-110
NZ_CP054038.1|WP_172988577.1|324088_325099_-|malate-dehydrogenase	gnl|CDD|235468	PRK05442, PRK05442, malate dehydrogenase; Provisional.	0
NZ_CP054038.1|WP_172988589.1|348888_349464_+|dihydrofolate-reductase-family-protein	gnl|CDD|334719	pfam01872, RibD_C, RibD C-terminal domain. The function of this domain is not known, but it is thought to be involved in riboflavin biosynthesis. This domain is found in the C-terminus of RibD/RibG, in combination with pfam00383, as well as in isolation in some archaebacterial proteins. This family appears to be related to pfam00186.	3.15837e-11
NZ_CP054038.1|WP_172988579.1|330778_332218_-|MFS-transporter	gnl|CDD|379134	pfam13347, MFS_2, MFS/sugar transport protein. This family is part of the major facilitator superfamily of membrane transport proteins.	5.31916e-70
NZ_CP054038.1|WP_172988585.1|342553_344350_-|hypothetical-protein	gnl|CDD|293789	sd00042, LVIVD, LVIVD repeat. LVIVD repeats are mainly found in bacterial and archaeal cell surface proteins, many of them hypothetical. Structurally, LVIVD repeats have been predicted to form a beta-propeller, with each repeat forming one four-stranded anti-parallel beta-sheet blade.	4.99874e-13
NZ_CP054038.1|WP_172988591.1|351357_353454_+|PTS-glucose-transporter-subunit-IIA	gnl|CDD|273919	TIGR01995, beta-glucosides_PTS_EIIBCA, PTS system, beta-glucoside-specific IIABC component. This model represents a family of PTS enzyme II proteins in which all three domains are found in the same polypeptide chain and which appear to have a broad specificity for beta-glucosides including salicin (beta-D-glucose-1-salicylate) and arbutin (Hydroquinone-O-beta-D-glucopyranoside). These are distinct from the closely related sucrose-specific and trehalose-specific PTS transporters.	7.12522e-144
NZ_CP054038.1|WP_172988582.1|338908_339172_-|NrdH-redoxin	gnl|CDD|131255	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein. This family of glutaredoxin-like proteins is limited to the Actinobacteria and contains the conserved CxxC motif.	1.28027e-18
NZ_CP054038.1|WP_172988587.1|345257_345770_+|ACT-domain-containing-protein	gnl|CDD|225337	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism].	1.0704e-32
NZ_CP054038.1|WP_172988586.1|344568_345228_+|DUF305-domain-containing-protein	gnl|CDD|367619	pfam03713, DUF305, Domain of unknown function (DUF305). Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.	9.44e-38
NZ_CP054038.1|WP_172991447.1|333603_334629_-|hypothetical-protein	gnl|CDD|238624	cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.	1.62135e-15

Protein sequences

>NZ_CP054038.1|WP_172991449.1|339323_340469_+|glycosyltransferase-family-2-protein
MQLSIIVPTFNEAPNVAELIRRIGAAARGIEAEIVIVDDSTDDTPAIARAVAETASLPVRVVHRDEAEGGLGGAVLDGFVAARADACLVMDADLQHPPEKIPELWDRFVEGDVDLVIASRYAGGGTAEGLADRTRVLVSKASTALTRAMFPIRLKDVSDPMTGFFLVDRRAVDQAILQPRGFKILLEILARRPMRVAEIPFEFADRHAGDSKASVRQGIHFLTQLTALRFGKMSMFALIGGLGAIANLAIVWALTGLGMDYVIAAIIAAETTIIGNFLLLERFVFHDMRASASVGWLRFVKSFTFNNAEALVRIPIMALLVESWHISAVVATGITLVAAFVVRFVFHSLVVYAPRKPGAEPSRSRRFVEAVDDEAMAPGEL
>NZ_CP054038.1|WP_172988582.1|338908_339172_-|NrdH-redoxin
MTSETTTTLTMFGADWCRDCVRTKAQLDALGVAYTYVDLVADPAAADVAREISGRTNIPVVVYPDSSHHVEPSNSDVETKLRELSLI
>NZ_CP054038.1|WP_172988581.1|338002_338863_-|tryptophan-2,3-dioxygenase
MTEGVERNTRTIEGSVVTDFADRMSYGGYLDLKTLLSAQRPLSSPEHHDELLFIIQHQTTELWLKLVLHELSGAALMLRDDNLAPALKCIARVKHIQKTLTEQWSVLATLTPAEYAQFRGVLGNASGFQSAQYRAIEFTLGNKNAGMLRVFEADPDAHALVKAALDAPSLYDEFLRMLARAGYEIPASILERDVTQAWEFTPELVPVLAAVYEDPQNHWATYETCEELVDLEDNFQHWRFRHLKTVERIIGMKTGTGGSSGAPFLKRALELTFFPELYAVRTELGA
>NZ_CP054038.1|WP_172991448.1|334825_337918_+|S8-family-serine-peptidase
MGGAAWALDAPDPVPIPDGAIDPSIEAPVPLGVSAGLDGVTGTVEVTVRLAEPAIAESVVDGALAAGTVPTKAEQKSKRTKVDAQQKSFAKSAKALGATELGSIQLAGNVVAVSIDAADLDALAALDNVISVTPLGRYETHSTNADEVESGSLAQAIDYVEAGALHDAGYDGSGVKVAVLDSGIDYTHFNLGGPGDVAFHTACFAVANAPVAGDCADYFGPSAPKVKGGYDFVGDDWPTYGAVKPDANPLDAPSAPRFSGDKAWDGGHGTHVADIIGGRSADESHQGIAPGADLYAVKVCSSVSTSCNGVAILQGMDWSLDPNGDGDISDAVDIVNMSLGSAYGQDQDDSSFAAANLVHAGVTVVVSAGNSADRPFIVGSPSSAPGVISVAQTALPDDLQWVITTDRGITINRSVHQSWSPLPTGVISADLARPTDAGGIGCSQGAFPATMAGKIALIARGICNVSDKALFAQRAGAIAAIIYNNVAGDAPSFSFGSAEAISIPTLTITQAAGTQLVNALATGAVVATIDPASAISLANTMVGTSSRGVTVSENRAKPDIGAPGAWLSAETATGTEETNFGGTSGAAPVVSGAAALLLDKFEKAPPAEIKARLLNGADNANTTPTATGFVTTPISRIGAGEVRVAPAAAAVSWLAGPEGAGNVGFGIPSVTGLYETTLEATLTNTTGKNQKYSFATTFRDAADQASGAVSVTVTPKSATVPKGKTQKVTVHLKIDGAKLADWPFNSVGSNGDGTTLNAPEFDGWITATGAGDSVKLGWTVLPRKAAELSAPASATAVDGVATVEIANASPIAAGPLSIFGLTGTSPELPATGAGAPGSNAAVIDLAATGVRSAGANLQFAMATYERRTVLTYPAEFDVYIDTNNDGQDDFVLYNAENGGFGATGQSIVNVFDLNTGVQSAFFFNIGGFDSSTQVFTVPAAALGLTAGQTFGFSVYAFDNYFTGNLTDAIEGQSYTLGSPKYTPTGVATIAAGDALTLPVSVSNVAGTSESGLLLLYGSAAEKDWGTVAID
>NZ_CP054038.1|WP_172991447.1|333603_334629_-|hypothetical-protein
MAPGAAIEDDGRVQHPDPVAVRELVGSAADVRRSASTGELGTTLPPFIDHHVHLALIDEGRLIEGGIAGVVDLGGDPFAFARRARSGMPHVEYAGAFLTAPGGYPSGRSWAPAEIVREVSSASTHPGVAGGAATAVDEQAACGASVIKVALHRAAGPVFDAATLAAIVELARERGLPVVAHVEGEGMPLLALDAGVDALAHTPFTETLDAALVRRAARAGQRWISTLDIHRDDPGARGHARANLAAYAAAGGRVLYGTDLGNGDLPIGVNAAEIAALEECGVRGAALVAALTDPWPAGADHGAAGVATFIPGPVPADLDAVPGWLAGARVVPTEELLHDDH
>NZ_CP054038.1|WP_172988580.1|332354_333617_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MTTTDLDATTIAGLERTASELDAADPIAALRDEFVGAETSLVYFDGNSLGRPPRATVDRLARFVTEEWGGRLIRGWDESWMQLPFAIGDEIGRVAIGAGAGQTVIGDSTTVLLYKLLRAAFDAQQAADPARVEIVVDTDNFPTDRYLVDGIARERGGRVRWIEADRAAGVTADQLRAAVGPQTAVVLLSHVAYRSGHLADAPALTGIAHDAGALILWDLCHSAGSVPVEADAWGFDLAVGCTYKYLNGGPGAPAFAYVAQRHQAALAQPIQGWMGAADVFAMGPEYRPAEGMRRFLSGTPPIVGMLAMQDTLAMIERVGIEAIRAKSVALTDFTVTVSDTLLAPLGVAVASPRDAAERGGHVTLSHPAMRAVTAALWEQDVIPDYRDPEGLRIGLSPLSTSFAETLAGLRAVAAAVRAAS
>NZ_CP054038.1|WP_172988579.1|330778_332218_-|MFS-transporter
MSTDAPDAGAAASPLPSRTKNLSPSTIARYAIGSLGTGGFATLPGLVLTYYLTDSLGVAALVAGLVITVAKIWDVVIDPIVGALTDRDLARHGSRRRLMRVGALSIPVLFALTFAVPPSVGPLVGAVWVFIAFTLTATAFSLFQVPYIALPAELTPDYDERTRLLTWRVVVLTVAILLFGAGGPALRRLTGDPVTGYLVMGVVAGVVIGVGMLVATTVARRPVTARGDAVVPVRTGALATAARAGIRAHYATGIHALRRSRPFRLLLTTFVLQALATGLMLAGAQYLARWVLHSEAAVELLFAALIAPALLAAPAWGALARRIGKERAFAIASVVFAVAALSIIGTLWMPGAWVYAPVGIAGIAYAGMQSLPMAMLPDVISHDERTHGPGRAGAFSGVWTAGETVGFALGATVLSLILAATGYVSSTAAESVAQPEAAIAGIIVSFSIAPAALIALSLVTLARYPLRRADIAATAPVRA
>NZ_CP054038.1|WP_172991446.1|328749_330651_-|aldehyde-dehydrogenase-family-protein
MPPETPAAGVPVSRARRRREAAAATAPTPVAGAVAAAPVDEAGAPAEAPVPASTLPVEVQASIDAALAALDTGARTWTHLTLDQRARLMERLHATTSTVIDTWAYTAALSKDLDPAGPLRGEEWLSGPYGVLTAFEAYHDTLRRMAAGDSPLHRVKLDAAQGRTRARVFPRQAIDHLLVPGCTGEVWFEPGVTADQARREAGLGQLDPTASGGIGLVLGAGNVTAIPVLDVLYELLAHNRVALLKVNPTQDALVPVFERALAPLIEPGYLRIVRGDGAVGAYLTQHPAIAHVHITGAADTFDRIVWGPPSGPDADETDRRRRENRPLLDKPITAELGGVSPIIVVPGAWSEADLAFQAEHIVTMRLQNSGHNCIAGQVVLLSSDWDQRDAFLEALRTAYDAAPRRSAWYPRAAAKLEDAASDYPDATWCADGSRALIIVDAGADAAPVEKTEYFAPVLGVVSLPGLGQEFVDAAVRHANEELIGTLGANVLIDPLTQAALGDGFERAIAMLRYGTISINSWTAVGFMTPALPWGGYPGATLREVESGIGVVHNAMLLDRVERAVMRGPFRPFPRSLEPRALVASKGRSFSLLPKPPWFVTARTGAQVSEGYARFRADRDWAHFARTLIAALRG
>NZ_CP054038.1|WP_172988578.1|327127_328687_+|DEAD/DEAH-box-helicase
MTETTFSALGVPQPLVDALAADGKTTAFPIQVDTLPDTLAGRDVLGRGKTGSGKTLAFSIPMAARLGAAKTRRVAGRPRGLVLAPTRELATQIDAALAPLAKAYGLNTTTIFGGVSQNRQVQALNAGVDIVVACPGRLEDLMKQGFIRLDAVEVTVIDEADHMADLGFLPGVTRILNATPQGGQRLLFSATLDNGVDKLVKRFLQNEVLHSVDEAHSPVAAMTHHVFTLVDADLKKDVVTALASGMGRRILFMRTKHHAKKLAKQLTAQGIPSVDLHGNLSQPARDRNLAAFSSGAAKVLVATDVAARGVHVDDVELVVHVDPPTEHKAYLHRSGRTARAGAEGAVVTLVLPGQERDVQQLLRKAAITAKPVGVTATSAEVTALVGEVAPYVKPEPVAAPAQGGGRSQGANAQRKRAAREQGAGQQGQGQGRGRGRGGRPAGERANGGRPVAERSARDDAPAAARGRADHSAGHTRSAQPAQAQGNPRTTGRRASTGGTGKLTVGSVVRQNGTNRRSGR
>NZ_CP054038.1|WP_172988577.1|324088_325099_-|malate-dehydrogenase
MNAAPVTVTLTGAGGQIGYALLFRIAAGDMLGPDTPVRLRLLEIPQGLRAAEGAALELQDGAFALLRGVEVTDDPAVAFDGCSIAMLVGARPRGPGMERSDLLAANAGIFGPQGAAIGEHAAADVRAVVVGNPANTNALIAAASTRGVPAERFTALTRLDHNRAVGQLAAVLDAGPGDIDGVAIWGNHSATQFPDVDHATVRGMAARDALTARFGDAATAARWLDDEFVPRVARRGAEIIEVRGSSSVASAANAAIEHVRDDVRGTGERWTSAAVVSHGEYGVPEGLVCSFPVRSDGWGYRVVEGLELDARARTRLEASVAELTAERDAVRELGVI
>NZ_CP054038.1|WP_172988583.1|340867_342049_-|SDR-family-oxidoreductase
MAASLAAPGRGGGIHRAACISAPARRLCAGEVDGLAVAVARRTTDRSLTRPILSEETNMDAATPPRRWTIDLPDLSGRRALVTGASDGVGLEIARDLASAGAHVLMPVRNRAKGEAVVARLTADAPAGRFTLYDLDLASTASARTLAADLMSAGARIDIVVINAGIVMLGDPVRHLTADGTELHLQTNFLGHAALLAGILPLLQASRTRLAVQCSLAVRTGRVQWDDPQLEHGYRAMRAYAASKAALALYATELARRSDTGGWGLRTVLCHPGVAMTNIAPPEMQARDTLLTRVSGALLTRGVFGQCAADAALPALHAVTAAGLRSGDLVVPSRRGGVMGPPVGQRRWRSLRDAGEAARAVDLADRLTGVRLAAASAGGMDAAPGAASAASTL
>NZ_CP054038.1|WP_172988584.1|342047_342401_+|hypothetical-protein
MPPADWIEHRRADGELVGWIVPAGDGFRVRDLLGREVTGEVDWLEAEETLDALGIGYLADAYTLRLPDGAERPVRISEASSRGITVVADEFGAAKTVGAVLDSWRLPFPAPADLRPI
>NZ_CP054038.1|WP_172988585.1|342553_344350_-|hypothetical-protein
MRDRSAPSSWRRRAVAAAGAIVLGASMISATAGAAVAEDDPRENLGAGLADAEQAASNIALLANLPKEGPFAFNVNPTAYNSDLAFTGDKAIVGSYYGFQIYDISDPASPSLDGTFVCPGGQGDVSVYGDILFMSVESAPGRLDCGTSPSPATGDPQNFRGVRVFDISDLTAPVQVAAVQTCRGSHTHTVVPDPDDSENVYVYVSGTGGARTTSPNVPGGCTNVNGNTIESQLDADGDPILGSRFLVEVIKVPLANPAAAEVVNKARLFTDAETGSPAGLWPGGNHGEGTQSTSATDACHDITVYPAVGLAAGACEGNGILIDISDPANPMRIDAVTDPGFAYWHSATFNNDGTKVVFTDEWGGGSGARCREGDRMDWGADAIFDIVAGKLEFASYYKLPVVQTSQENCVAHNGSLIPVPGRDIMVQAWYQGGLSIVDFTDSENPVEIASFDRGPISTASLVLGGYWSTYWYNGNVLGSEIARGFDSLALTPSAMLSANEIAAAMAVQVDQLNAQSQEPIMHTPSFAVARSYIDQAERAGTLVGNDLKQVRKSVEQAEKLAGSSASATAVQTQFDNAVRKAGANAAVVEALQALAGSM
>NZ_CP054038.1|WP_172988586.1|344568_345228_+|DUF305-domain-containing-protein
MSDTVFRAGLVIVLGLGALGLSACTADEPPFVESTAPVVQIGAPGEPNRELSAEEQEALTSPEHVEADVVFIRDMLEHHAQALVMTGLVPDNSDDPDLALLAERMQLSQDAEMDQLEKWLQDRGEAVRDPDGHGHSAEDMPGMLTDAQLAELEAADGAEFDLLFLEYMIQHHEGAIAMVQELYAAGGGMELAVDDIARHVEADQGIEIARMQQMIAERS
>NZ_CP054038.1|WP_172988587.1|345257_345770_+|ACT-domain-containing-protein
MTTLVLTVVGNDRAGLVAAVAEVVGDHGGNWESSQLAELAGAFAGVIEVSVAPERSEELRAALGELEGLLTVAVHASEEDADAAPARTLEFTVLGNDRVGIVRDISKVLGAHDVSIERMATETRDAAMFGGRLFEATIVATVPDSVDLESVRDEIERLATEIQVDVTLAR
>NZ_CP054038.1|WP_172991450.1|345824_347510_-|glucose-6-phosphate-isomerase
MVTAPIDATATSAWAELSAHRDSFTPDLRGWFADDPGRVERLSLPLADLHVDLSKNLVTDEILASLVRLAEQTGVAERYAAMLAGEHINTTEDRAVLHTALRRPADIEPALVVDGQDVDADVQDVLAKVGAFAERVRSGAWKGVTGKKVTHVVNIGIGGSDLGPVMIYEALKPYADAGIEARFVSNIDPTDLAQKTADLDPETTLFIVASKTFTTLETLTNARLARDWLWAGLVEADIIDGGEASRTDAVAHHFIAVSTALDKVAAFGIDTDNAFGFWDWVGGRYSVDSAIGTSLAITLGPGVFTELLEGFHRVDEHVRETPLAQNVPVLMGLLNVWYSNFLGSQSHAVLPYAQQLHRFAAYLQQLTMESNGKSVRWDGSPVTTDTGEVFWGEPGTNGQHAFYQLIHQGTRLIPADFIAFVNPAYPLEDGGRDVHGLFLANFLAQTKALAFGKTATEVEAEGTTGPLVAARTFAGNRPTTSIFAPALTPSVLGQLVALYEHITFTQGVIWGINSFDQWGVELGKQLALQIAPAIEGDDEALASQDASTRALIDYYRTHRGE
>NZ_CP054038.1|WP_172988588.1|347560_348742_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MVLSARAGKAAESVAKVTRFFAGIQSLEGDDALDFTFGNPHEMALPGLVGALRANVEPRAVDWFAYKSNERDAQEAIATALRGELGLDFVPDDIAMTQGAFGAIQLALALLTDAGDEVVIPTPGWFCYEPMLHAADLVPVTAPLDQSDFSLDVDAIARALTPRTRIVIVNSPANPTGRVYPPETWDALAAVLEDASRTHGRRIWLLSDEPYRRIRFDGIGFSSPAAHYPWTLIDYSYGKVLLAPGQRLGYLALSPLLPAAERTQLAEAFMPTQLAIGWGFPDAIMQYSVPALEAVSIDMEELARKRSRVVGALRDAGYALTNPEGTFYLWGEAPGGDALAYCDRLAERGIHLMPGTLFDVPTHFRISLTATSDTVERALPALIEAGPGAQPRG
>NZ_CP054038.1|WP_172988589.1|348888_349464_+|dihydrofolate-reductase-family-protein
MPGPLVYFNSMSLDGYIAGPDGTFDWAVPDHEVHSFVNDLVGGARTHLYGRRNYEIMRVWDDLADDPDISEPEREFAEAWEGIDKIVYSTTLTSVDMRRTQLRARFDADEVRRLKDAVDHPVMIGGGQIAGVAARAGLLDEVHAIVLPVVAGGGTRFLADSAHLALDLIDERRFGNGSVYLGYRVRSTESG
>NZ_CP054038.1|WP_172988590.1|349582_351181_-|Na+/H+-antiporter-NhaC-family-protein
MLDAAPWLTLVPPAVAIALAIITRKVMLSLGAGVLAAGLLIAEFNVVEALRVIWESFAVIFWDDGALNTWYIYILLFILLLGVFAAFIMMSGGTKAFADWALVRIRTRRGGQVLPAVLGIVIFIDDYFNALAVGQISRPVTDAHRISRAKLAYIVDSTSAPIAVLAPFSSWGAYIIGIFAPIVAASTLTIGSVEAFLGAAAANYYAIAAAVLVWLVIAFRADLGAMRREERRAIVEGRPFAEGEVVPGQLSEDLPSHEPGAKRAIIVPFVLLVVGVFAGIVWTGYSASGSWAVVDLLASTDASASLIIGGILGLASAIYYYARYTAANPTFGWHTFGRGWGGGAKSMLPAIGILILAWMLGGLIDTLGTGVYLGDLVESASISPQWLIPIVFLVAAAMAFATGTSWGSFGLLLPIAGGIVNAVDAPELLLPMLGAVLAGAVAGDHSSPISDTTILSATGAGCNVLTHVVTQLPFVGVAGLATLVGYVVLALTQLIWLGLLVTLVVLVGAVLLVRFVMRPVEVEAAAAVGENA
>NZ_CP054038.1|WP_172988591.1|351357_353454_+|PTS-glucose-transporter-subunit-IIA
MASSPAAAIVESLGGPGNIESLTHCATRLRFQLRDASGVDQSQVEAIPGVMGAVPQAGERFQVVIGGGVQNVYNDIMALPAMSGGGAAPDESLDDIKKREREKGVRGKVAWIDTLFEFLSDSFRPILGALLGASFFITFMALMATLDVIPDWNAPGVTLDPSWAFINLMWQSVFIFLPLMVAYNATKKVGADPWVGFAIMAVLMLPGFTALGDGVEPTALFGLDAASVAIVQVWGIPLPIANYNSQVFPPLLMAAALGPLYKLLRRIISANLQLIFVPFFAMLIMMPLTAFVIGPIGVYVGAVLASVLAAINSFSPFIFAIVIPLAYPFMVPLGLHWPINAIMLLNIQTLGFDFIQGPMGAWNFACFGATAGVLVLAYRHRDTQMKQTATGALAAGLLGGISEPSLYGIHLRFKRIYPRMLVGCFVGGLTIGLGSLFLGLPNGVTTQAFVFTSLLTIPAFNPIGLYAIAIGLAFVTAMVLVLTANFRTPEQQAEFEAARDAAEAKAAAEHVSAASVEASEPRVMDASDAAPAAAAAATTTAVLERQEVEIMSPLAGTVVALDQVPDPVFASGTMGPGAAIEPSGDTVYAPGAGMVAAAQPTGHAFGLVLDGGVELLIHVGIDTVNLKGEGFEVHVKNGDRIELGTPLVTFDRAVIEKAGYPLITPVIVLNADDFAEVSPVLEGTVEPGASLISVAPKA

Crispr_ID: NZ_CP054038_4

• CRISPR_ID: NZ_CP054038_4
• CRISPR_location: 372639-372751
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_4

Consensus_repeat	Method
CCCGTTCGCTGCTCCGCTGTCGCAGTCGGCG	CRISPRCasFinder

spacers of NZ_CP054038_4

>4.1|372670|51|NZ_CP054038|CRISPRCasFinder
AGCGGGACTGCAGATTGTGACAGCGGAAGGGTGGGGTTGTGCGCGCGGCCT

CRISPR arrays and Neighbor proteins around NZ_CP054038_4

CRISPR arrays

The CRISPR arrays of NZ_CP054038_4

>merge|NZ_CP054038|4|372639-372751|CRISPRCasFinder
CCCGTTCGCTGCTCCGCTGTCGCAGTCGGCGAGCGGGACTGCAGATTGTGACAGCGGAAGGGTGGGGTTGTGCGCGCGGCCTCCCGTTCGCTGCTCCGCTGTCGCAATCGGCG

>NZ_CP054038|4|4|372639-372751|CRISPRCasFinder
CCCGTTCGCTGCTCCGCTGTCGCAGTCGGCG	AGCGGGACTGCAGATTGTGACAGCGGAAGGGTGGGGTTGTGCGCGCGGCCT
CCCGTTCGCTGCTCCGCTGTCGCAATCGGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172988603.1|370352_371816_+|cardiolipin-synthase	unknown	unknown	gnl|CDD|234967
NZ_CP054038.1|WP_172988608.1|377415_379038_-|copper-resistance-protein-CopC/CopD	unknown	unknown	gnl|CDD|224195
NZ_CP054038.1|WP_172988612.1|388809_389217_+|dehydrogenase	unknown	unknown	unknown
NZ_CP054038.1|WP_172988600.1|363703_364192_+|DUF3180-family-protein	unknown	unknown	gnl|CDD|378650
NZ_CP054038.1|WP_172991452.1|363227_363707_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|223872
NZ_CP054038.1|WP_172988611.1|381296_388739_+|cell-wall-binding-repeat-containing-protein	unknown	unknown	gnl|CDD|367829
NZ_CP054038.1|WP_172991451.1|362802_363177_+|dihydroneopterin-aldolase	unknown	unknown	gnl|CDD|376737
NZ_CP054038.1|WP_172988607.1|376771_377419_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991454.1|364975_366502_+|PH-domain-containing-protein	unknown	unknown	gnl|CDD|225962
NZ_CP054038.1|WP_172988610.1|379792_380347_+|amino-acid-N-acetyltransferase	unknown	unknown	gnl|CDD|236132
NZ_CP054038.1|WP_172988602.1|368740_369943_-|DUF4192-family-protein	unknown	unknown	gnl|CDD|379390
NZ_CP054038.1|WP_172988606.1|374175_376704_+|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl|CDD|223616
NZ_CP054038.1|WP_172988613.1|389257_389626_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988604.1|371898_372624_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988609.1|379034_379640_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988605.1|372943_373903_+|DUF559-domain-containing-protein	unknown	unknown	gnl|CDD|380141
NZ_CP054038.1|WP_172991455.1|370063_370291_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988601.1|366498_367224_+|DUF2520-domain-containing-protein	unknown	unknown	gnl|CDD|287672
NZ_CP054038.1|WP_172991453.1|364388_364889_+|PH-domain-containing-protein	unknown	unknown	gnl|CDD|225937
NZ_CP054038.1|WP_172988614.1|389709_391077_-|DNA-repair-protein-RadA	unknown	unknown	gnl|CDD|236994

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172988603.1|370352_371816_+|cardiolipin-synthase	gnl|CDD|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	6.74712e-129
NZ_CP054038.1|WP_172988608.1|377415_379038_-|copper-resistance-protein-CopC/CopD	gnl|CDD|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	5.17368e-18
NZ_CP054038.1|WP_172988600.1|363703_364192_+|DUF3180-family-protein	gnl|CDD|378650	pfam11377, DUF3180, Protein of unknown function (DUF3180). Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently there is no known function.	7.64726e-18
NZ_CP054038.1|WP_172991452.1|363227_363707_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|223872	COG0801, FolK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism].	3.17044e-48
NZ_CP054038.1|WP_172988611.1|381296_388739_+|cell-wall-binding-repeat-containing-protein	gnl|CDD|367829	pfam04122, CW_binding_2, Putative cell wall binding repeat 2. This repeat is found in multiple tandem copies in proteins including amidase enhancers and adhesins.	4.75968e-19
NZ_CP054038.1|WP_172991451.1|362802_363177_+|dihydroneopterin-aldolase	gnl|CDD|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	2.3562e-44
NZ_CP054038.1|WP_172991454.1|364975_366502_+|PH-domain-containing-protein	gnl|CDD|225962	COG3428, COG3428, Predicted membrane protein [Function unknown].	1.99561e-26
NZ_CP054038.1|WP_172988610.1|379792_380347_+|amino-acid-N-acetyltransferase	gnl|CDD|236132	PRK07922, PRK07922, amino-acid N-acetyltransferase.	1.22218e-93
NZ_CP054038.1|WP_172988602.1|368740_369943_-|DUF4192-family-protein	gnl|CDD|379390	pfam13830, DUF4192, Domain of unknown function (DUF4192).	3.39583e-13
NZ_CP054038.1|WP_172988606.1|374175_376704_+|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl|CDD|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP054038.1|WP_172988605.1|372943_373903_+|DUF559-domain-containing-protein	gnl|CDD|380141	pfam18741, MTES_1575, REase_MTES_1575. Vsr REase Fold. Fused to HEPN (SWT1/Abi2 family), along with Transglutaminase and wHTH.	6.32308e-09
NZ_CP054038.1|WP_172988601.1|366498_367224_+|DUF2520-domain-containing-protein	gnl|CDD|287672	pfam10727, Rossmann-like, Rossmann-like domain. This family of proteins contain a Rossmann-like domain.	1.86063e-31
NZ_CP054038.1|WP_172991453.1|364388_364889_+|PH-domain-containing-protein	gnl|CDD|225937	COG3402, COG3402, Uncharacterized conserved protein [Function unknown].	1.18318e-21
NZ_CP054038.1|WP_172988614.1|389709_391077_-|DNA-repair-protein-RadA	gnl|CDD|236994	PRK11823, PRK11823, DNA repair protein RadA; Provisional.	0

Protein sequences

>NZ_CP054038.1|WP_172988604.1|371898_372624_+|hypothetical-protein
MSRRILPLAVLLAGGLLLSACATPVGTVGSEPSGSSSPSPSPSASDDDTAETEVDAAWLDAGRMIGVVTYGSSTCIPRAEEVAMVDGVLEVELRDDPAAACTRDLAPRASVVALPEGVDPTQDLEIRVTGGYSGDTDLDGLDAAPSGTTEFLPSAGWVEDGMFVVLTWGSSSCVPELASVEATGPAEVTATFATPPADQVCTMDMAPRALVATVEGVDDDEAVLVLTGGEFLEVRTPILPS
>NZ_CP054038.1|WP_172988603.1|370352_371816_+|cardiolipin-synthase
MDPSTLAAWWLIFVFVFDVTVRITAVIIVPRNRRPTAAMAWLLAIYFIPLIGVFLFLLIGNPRLPRKRRRMQQAINEYIHETSAGLDFGTLRPHAPEWFTSLVTMNRNLGAMPLAGDNGAHLIPDYQGSLDEMADAVRTAQRYVHIEFYILQTDASTDNLFRAMEEACARGVTVRVLLDHWANRGKPFYKKTLRRLDAMGAAWKLMLPVQPLRGKYQRPDLRNHRKLLVVDGTVAFMGSQNVTDSTYNLRKNIRRGLHWVDLMVRVQGPVVASINAVFLSDWYSETDEILTDEIDLFSVEAGPGDLDCQIVPSGPGFEFENNLKLFAGLLYAAQHKIIMVSPYFVPAEALLLAVTTACQRGVEVELFVSEEGDQALVYHAQRSYYEALLRAGVRIWMYRKPFILHSKSMTIDNETAIIGSSNMDMRSFGLNMEISMLVRGEEFVREMREVEDTYRSLSRELTLEEWMRQRLRSTVLDNLARLTSALQ
>NZ_CP054038.1|WP_172991455.1|370063_370291_+|hypothetical-protein
MDDFWLAALWSLLPTVVVSALFFYVLRSIIRADRNERREYARIEAQERAKRGLPPASASRAADEPAADTAAPAAS
>NZ_CP054038.1|WP_172988602.1|368740_369943_-|DUF4192-family-protein
MTTIVKAANAAEFLGLVPQLLGCHVERSLVLVPFIGPRTGGAMRVDLPPDPDADVDAFAGTVLGMICKVADVDGVALIVYCPEQFGEEGPAMPRRRLIDALTERARRIGLRVVDALCVAADAWGSYLDDPPGAGAPLTAIAVAARPGEAPLPTPAADPLAACALPAVDLAAKEYVGRALIAIEEAVELLYRPPREGRRAGERRFDPRALGSVVALDDLPAFFEHALTLDPDELDPFVAAMLIWCLDRPSLRDVAISGWYGGLSAADTALDAQLRWEDGEAYPEEHAAFMWGDGPRPDARRLERAVDLMRRLAASAPRVRRPGTLATASWLSWALGRSSHAAHFAGEALRIDPEHGLSEIVLTLVGAGHLPEWAFTREHAGDPLTADPLAVPPEPTWRALT
>NZ_CP054038.1|WP_172988601.1|366498_367224_+|DUF2520-domain-containing-protein
MTREGRLGVGIIGAGRVGPVIGAALGGAGHAVVGITPGSDPERIEAVLPGVPHLDAVEVIRRSELVIVAVPSTELEALVAGLTDVGAWQPGQLVLHTDPRFGTGILAPVVAKGAIPLAVHPAIAFTGTSMDLRALAHSYAAVTAPAPVLPIAQALAVELGCEPVVVAEADRPAYAEAIATATEFSRSIVAQAARLLRQAGVAAPGPYLSSLIHSTIDHALSGADGGADTIDGDFRGAPTND
>NZ_CP054038.1|WP_172991454.1|364975_366502_+|PH-domain-containing-protein
MHPLTPLLRGGIFLLVLLGIVVSNLRDRIIYVFLPGIVPGIDPEDVEDFETGDVIDFVLVNDLIVVALVVVLLVLLVLVAMFYTMWRFHTFRITDDDVEVRSGVLFRTQRRAPLDRVQGVNLTRPMIARLFGLAKLEVVGAGADANVKLEYLPTTSAETVRADILRLASGRRLAAAEQRSATAERAGSRVAALGQTVSRGITGLIEGDEAPVDEPESVVDIPLGRLMLSHVFSPATIGLIVAAAAIGIGVSRGAFWLLFAFVPALIGYGAYWVRSIVRSLRYSIAPTPDGVRITFGLLTTVTENVPPGRVHAIEISQSILWRPAGWWTVRINRLSGRNASDAVSADQFTTVLPVGTSADVERVLRLLLPHLPEDEWPLIVREGMLGPTVDDTFTNTPRRARLMKPFSYRRNGFRLTEGLLILRRGVVWRKLAVLPLARMQSVGIDQGPLDRLFDVAGLRAHVVAGPVTTILAAVDRAQAVALFGDAAQGAVRAASDDHTHRWAQETER
>NZ_CP054038.1|WP_172991453.1|364388_364889_+|PH-domain-containing-protein
MAQTRSENRLALASGVWHQISPKYVTVQLISTGSFLALVIAATLALTLWLHQTWAWIPGGILTVIMVWTLAILPRQARSIGYQLRSDDLVFRRGILWQRMVAVPYGRMQLVDITHGPLDRGFGIAQLKFVTAAAATGVVIPGLSQQNAETLRDHLIAVAESRRTGL
>NZ_CP054038.1|WP_172988600.1|363703_364192_+|DUF3180-family-protein
MRRTSAGVLVFAAALGAASGFLIDQALTASGRSTFTPALSLPVLLVLLGVLVVTLALPIRRATRGTGRVDPFRAVRVAMLAKASSIVGAAIGGLALGFALFLLSRPVPPSVGSMAAILVTAGAGAVLVAAALVAEHLCTIRKDDDDEQPGGVDPGLDPHPHT
>NZ_CP054038.1|WP_172991452.1|363227_363707_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MPVPAVVALGANLGDRAATLAQAVAELRRLPLVDRVQAADPIESVAVTLDGPSTAAPAYLNSVAIVQTRLAPSVLLGFLHAIEARHGRERTVRWGDRTLDLDLIAYGDLRSDDPRLLLPHPRAAERDFVLAPWLAVDPDAVLPGSGRVDQLLAALREAR
>NZ_CP054038.1|WP_172991451.1|362802_363177_+|dihydroneopterin-aldolase
METWDEITLTGLRVFGRHGVYEEERRVGQYFLVDLTLFVDTRTAAASDAVADTVHYGEVAERVAALVAGDPVDLLETLVARIADDLLTVELVQGVRVTVHKPDAPIPVPFADVSVSIVRTRGAS
>NZ_CP054038.1|WP_172988605.1|372943_373903_+|DUF559-domain-containing-protein
MASPLPDELGDRFSVADALARGVLPSRLRGKDLEQHFHGARSRVASDDPRLHEDRSGMRRGELEREHLARALTYATRMSDGAFFSHVTAAVLWDVPLPGGLIRNAPVDVAVFKPVRLSRARGVRGHQAAAATTRVRVHPTWGVRLTAPATTWAMLGSVLRRPEDLVAAGDAVVRDWRVNEALASLEDLRHAIYAGRRVGVQQLREAIPDLRTRSASRQESRLRLCLMGAGLPEPDLNFDVFENGIKIACVDLAYPHLRIAIEYEGEHHLLDPEQWARDIRRYEQLEAAGWRVIRVTKAELAGDRRALLARVRAAIAGRS
>NZ_CP054038.1|WP_172988606.1|374175_376704_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MFERFTDRARRVVVLAQEEAKMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLDAVREQVQDIIGQGQQQPTGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNKVRQQVIQLLSGYQGKEPAGVASGAGEQTQGTTQGGSQVLDQFGRNLTQAARDNKLDPVIGREKEIERVMQILSRRSKNNPVLIGEPGVGKTAVVEGLAQAIVKGDVPETLKDKQLYSLDLGSLIAGSRYRGDFEERLKKVTKEIRTRGDIIVFIDEIHTLVGAGAAEGAIDAASILKPLLARGELQTIGATTLDEYRKHFEKDAALERRFQPIQVAEPSLPHAINILKGLRDRYEAHHKVQITDGAIVAAANLADRYISDRFLPDKAIDLIDEAGARLRLSILSSPPELREFDEKIAKVREDKEKASEDQDFEKAANLRDEEKSLLAERLRLEKQWRSGDVASHAVVDEGLIAEVLAQATGIPVFKLTEEESSRLVFMEKALHQRVIGQEEAIAALSKTIRRQRAGLKDPKRPSGSFIFAGPTGVGKTELAKALAEFLFDDEAALISLDMSEFGEKHTVSRLFGAPPGFVGFEEGGQLTEKVRRKPFSVVLFDEIEKAHPDIFNSLLQILEEGRLTDGQGRVIDFKNTVIIMTTNLGSSAIAGGPVGFQVEGNTQTTYDRMKGKVDEELKRHFKPEFLNRVDDIIVFPQLSKEELVQIVDLFTKRLGERLLDRDMTIELSLPAKERLIEIGFDPALGARPLRRAMQREVEDKLSELILHGQLDSGDHVKVDAVNGEFVFEHAPRGEKVAVGVVSNGEIAATPDLAITSD
>NZ_CP054038.1|WP_172988607.1|376771_377419_-|hypothetical-protein
MTRSRDPLLPRPTAPRLLAAAAAGLLALASLLVAAPASAHDEIGTLVIVSTEPAESSAGEGAIDLLVEIELTFVNDGHPATTSATVTAIAEGADGSTVGPVIAAPSGTAGIWTANLTLPTAGEWTVRLSSLTPKATLEQVVQAAPLEPTPTEEPAATPTPAPTATAAPPIDDASGTPASATDDAIGWVLGSVVGALAITAVVLAVLLPRRSARQN
>NZ_CP054038.1|WP_172988608.1|377415_379038_-|copper-resistance-protein-CopC/CopD
MTSALAVRPSAATRVLAVIAMALALVPALVLGSAAPARAHASILSIDPVPDWVYDDAPDEVSLTFNEPVSVELGGIRVFGPSGERVDGPTQQRDGDTTVWAPIEASDRGTYTVAWSVVSVDSHVLSSTLVFHVGEPTGTAADIEQADAGVVGVLGWLARWAIFTGMIALGGLVLSRLALRFALVGRRARVVAVSAAGLMLIGSVVKMAVQATSAAGVPVTDVFALGLGPVLDTRAGVLDGIRVIAAGVALAGALLWRRVWGAWLAGVATVTVMATLAVLGHAWTAEPPIAAASVDLVHQLAVTVWVGGLVALVVLDDRTQMDAAIRRFSRVALWALLAVVLSGFASALWQTAANPTTLFTEYGVLLLVKIALVGVMALLGWWQRRRLARAVHSAGRLLTGVRAEIVVAAVVLAITAVLVATVPARESLAPQPYTVAVAEDFGTVDVTVEPAIVGDNVVTMQFTDRVGTSRGVDVAQLTVSQGDLPPRAVTLTALAPDRWAAIDVSLPTDGEWTFELTTLSRGEESTVTFTVPIRGVEESE
>NZ_CP054038.1|WP_172988609.1|379034_379640_-|hypothetical-protein
MGSVTATTVERPPARVSRWVAVAVAAVLSAALVALAVWGAYTAMNPRALIGETISHDGGEFSVVAAWTMDDPMSAMPANNAAQFSAAGMSAMSAMMGDPVPEGMKRVMVQLELAAGDEAMEFPLEGVSLSADGASFGVVSSMLDDERLEPNTAMHALAIFEVPVETGVASFSLGAGSASVAVDVAGNPGGHSGHETEDEDE
>NZ_CP054038.1|WP_172988610.1|379792_380347_+|amino-acid-N-acetyltransferase
MTETRPTEAPFTVRPARTRDVRGIQSMLEPFVQRRILLGKDPVVLYEATQQFVVAETPDGELIGCGALHVMWEDLGEIRTLIVVDGWLHRGVGREIVDALEANARVLGLTRLFCLTFEVDFFTRRGFAPIGEQVVDPDVYSQLVRSPDEGVAEFLDLAHVKPNTLGNTRMLKTLHADAARSLDA
>NZ_CP054038.1|WP_172988611.1|381296_388739_+|cell-wall-binding-repeat-containing-protein
MDKRWSKGRVGVDAATVVVLAMAACAAGWFGAGVGAGLDQVLRVCATFSVAAVAAYFAVRAVWPLVARHVPSDRAAAAAARGILVGVLAVLLAFALSWLSAVILGTGNHGVHAQHAASGGGTLQHALLEVSMLAPALAVGLVVGHLAGSAVPTLRSWHRGMTQRQRRMVLPAGATMGVLLASTMPFVAAPANAAVPAVPACTAETAVRSYDVAAVHTYIPFSRWINDSRVPEQDPVVDGVDHLGDGDPAGMLFVLQQDKAAVQNWHVPIVGTAADGYAGDPAEGRRIRPRPLVLRANVGECVEITLSNELDPAAMAEFLPQVDPHVSMRAYGVSYNPADSGSAPVGYNPDGTAGVGESHTYYWVAPKSEGVYLFRDDGMTAGADEDGGGAEHGLYGALAVQPAGAHWFDPTTGRELSSAIPDQQYASVADQSGDLYINAVISDAVQKRFREAVLVSQDILPRQDRADLTEEELAALPEPFERFGINYGSDPEPKRLEFNIEGDERWCEDCSSEETILSSWVYGDPGMVKLASGPGPWLPEAPDFGGEDPFSAPGGLVADNVEDCDLRLTNAADEARPASCYVTNVVRAYQGDPIKLRFGHAGNYETHVFHLHAHTWSAEPDDSGPAGSNPPEPTEDNQPRATTIDSKTYSPWTAFTADLNYGAGARVGTIGDSIFHCHLYTHFSHGFWALLRSHDVLEDGTNALPDGTRVTSLVPLRETGSSLGFNASVPPTKLDASYEVPGYPRFIPGEYGARSPQAPGSIWQREFDANGDPVLDENGEPVDAPAVRIVETNELDPTLLEATQNIAVDAAATGDLSLTFDGETAAVPLPATAAQVESALESLDALIDVSVTGAGTELDPWLVTLVSWVSTNDLTVGATAISGVVTVTPSDGFDPGDPTTAKIASRLAVERSTQMTYHGARGTVPVPGAPVVDPCPAGAREITYRVSVIQLPLWYTGQAGGDGWRDVQGRILVLDSDVNAVLSGEKDPEPLFYRVNSGDCVNFHLTNRTPNVIGDDAYQQLIMTNMAGSHIHLVNFDVLASDGASNGWNYQQAAFTQEQADFNDDLLSGAETCAVGSECLPAMPVGRDPVAEAEDARGNWLMNGQTIKERWYADYELRTVFNHDHHFAGALQNRGLYSALLVEPAGFDSRDPYTGEWLQPINRADHASAAGKALCVDACSGEAAGTAMDMVGPSTPPTTEDAWEPDDFREYGIAIADFVPLFTQSATHADILDPANALEPPAAPLRGPEGDQGGMSINYRAAPLIDRQFAGVPPTAPANPTTPITNAQLAAAGWVDPAYAFSSRKWGDPDTPVLRANRGDTVRIRLIQGSHEEMHNFTVHGLRWRNDPLDPASPYINARPIGVSEAFNMQDVAVGCGLGAPANCFYSPDSTAPRVSDFMYGGPGVEDLWFGVWGIMRVFDQTAGNEGLLPLPDNNRALPVGNPLPAPDPLAPIEKALPNPTCPDGAPEQLFDVTAISHNIQYNRYGDHDPYGLAYVMTEDVAAIRAGTKELEPLVLRVHEGDCVRVTLRNDVDWAHFNQHGRLGTLDGDAEMPLEPVFPQVVEAGDEPPDDTGVPWIAGNRVSLHPSLVRYDVRTSDGTTVGYNFDQTAGPGEAVNYTWYADEVIYQDPAAEPALTDGELGAVPLLAYGDVRGTRHHGLLAALVVGPRDGMFRDPFTGAVVDNGAQVDVDPFGEGDDYRDAVVFQHNGLNLRDADGNHIYDPLVGDWPDKGERAISYHNAPLHTRLGLDNAFVDKFADPPIDGNGPPFSDPDFGEKLANVFSSTYVLDTGNGPQTLGDPDTPIIRAYQGDALRLHVVASSDRARTVQYAVQGHNWLEHPFDAGSVRAGVQGSIATGSAHTFHMEAAGGVMQAIGDYRYGVENARMGISSGSWGIVRVYQRPRAGTERILTPLAQCQNPYLGCNPLRVLNEPRTAPAGAPVLDVTANLDFAVVGQTVEVDAVLRLGDVPVRAGHQVQFRWVDGATPVTQTFTTNNDGEIAFDVPVDEYPPGGVLQIIGSTMLTDSYGVTSQINGGATVIVIDPTDAVAPAVVAVDPPDGAEDVMRSKQVAIEFSERLDIDTVDAAVRLVRLANGEAVDAEVSFTPSADLTHSTALIVADGPLRSGGYRVEVDASVTDLNGNPLGTPFTSTFTVSETFFDRIGGADRFATAAMISEQAFPTGADTVFVANGLNFPDALAGGPAAAAAGGPVLLVAATGAVPAATVAELSRLQPMHIKVLGGPAAVSDEVMTALSVHLPTDGTGTIERLAGGDRYATAASISAATFTPENTTRVFLASGENFPDALAGAAIAANGGAPVLLTAAGSLPASTAAEIARLQPDEVIVLGGSVVVSDAVASAAQAAAGSGATVQRLAGAGRYETAAAISAAFQPDGPTAVVYVATGSSFPDALAAAPVAGLTGGPIILLPPAGEIPTEVLAELRRLDPIQLRILGGEAAMPDAQIAQVRVALGLSAPVLPLGPTPQ
>NZ_CP054038.1|WP_172988612.1|388809_389217_+|dehydrogenase
MAGKKRAKKKEPLEFRNTQLTDALQTQDMAAVAFALRHGPTVVPLMRPGQRDDPRDVGEVWTYRDPNTGDVALLLFSDAAHKPASLPPGVALQSPAWLRAFLGTHESEITTVFFDIAGPHPLQAAPADLLAALDA
>NZ_CP054038.1|WP_172988613.1|389257_389626_+|hypothetical-protein
MCVGIAALLALSGCATGPFTGVPVTGPLAVHPRVDAGMDALLEGTLRTDDDCIRVEYGESGESVAVPSFPAGDASVEGRTLTWRGETYGDGGAIALGGGFANSGGYVPGSCGEAEVFVVSPY
>NZ_CP054038.1|WP_172988614.1|389709_391077_-|DNA-repair-protein-RadA
MASRRPTQTAPYRCTECGWTTIKWVGRCGECQQWGTVVESAEQTGIVRSVAPVAPGAARAARPITHIDTADTPRRTTGVGEFDRVLGGGLVPGAAILLSGEPGVGKSTLLLEVAVQAAREGRRVLYASAEESAAQVRLRAERTGALHDELYLASETDLATILGHVDQVEPELLIVDSVQTVSSALSEGMAGHPGQVREVASTLIRVAKERALPTIIVGHVTKDGSIAGPRILEHLVDVVCHFEGDRQTSLRFVRALKNRFGPTDEVGCFDMAGDGIAEVPDPSALFLGHGAPEPGTCVTIAMEGRRALPVEVQALTIQTSAPNPRRVVNGVDAARVAMVLAVLERRARIKVSDQDVYVSTVGGVRLTEPAADLAIAVAIANALRDVALPRGVAAVGELTLTGEIRPVTQAAQRRSEAARLGYATVVDAASKTLRGALDDLSVRTRPRRGEDEPGF

Crispr_ID: NZ_CP054038_5

• CRISPR_ID: NZ_CP054038_5
• CRISPR_location: 800781-801161
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 7 spacers

Consensus repeat of NZ_CP054038_5

Consensus_repeat	Method
CCGTCGGCGAGCTGCCCGGCGCCG	CRISPRCasFinder

spacers of NZ_CP054038_5

>5.1|800805|18|NZ_CP054038|CRISPRCasFinder
ACCGCCATCTGGTCGAGG
>5.2|800847|60|NZ_CP054038|CRISPRCasFinder
GCGGCGATGTCGTTCGCGCCGGCCGCCCACCGGTCGAGGCCGTCCGCGGCGGCGGTCGTA
>5.3|800931|39|NZ_CP054038|CRISPRCasFinder
GAGGCGATGCCGGCCGCACCCGAGGAGATGCCGTTTGCG
>5.4|800994|18|NZ_CP054038|CRISPRCasFinder
GAGGCGAGCTCGTGGGCA
>5.5|801036|18|NZ_CP054038|CRISPRCasFinder
GAGGAGATGCCGTTCGCA
>5.6|801078|18|NZ_CP054038|CRISPRCasFinder
CTGGAGAGCTGTGCGATG
>5.7|801120|18|NZ_CP054038|CRISPRCasFinder
TCGGCTGCGTCACCCGCC

CRISPR arrays and Neighbor proteins around NZ_CP054038_5

CRISPR arrays

The CRISPR arrays of NZ_CP054038_5

>merge|NZ_CP054038|5|800781-801161|CRISPRCasFinder
ACGTCGGGGAGCTGCGCAACGCCGACCGCCATCTGGTCGAGGCCGTTCGCGAGGTCCCGTCCGCCGGCGGCGATGTCGTTCGCGCCGGCCGCCCACCGGTCGAGGCCGTCCGCGGCGGCGGTCGTACCGGAGGCGAGCTGCGCGGTCCCGGAGGCGATGCCGGCCGCACCCGAGGAGATGCCGTTTGCGCCGTCGGCGAGTCCCGTCGCGCCGGAGGCGAGCTCGTGGGCACCACCGGCGAGCTGTCCGACGCCCGAGGAGATGCCGTTCGCACCGTCGGCGAGCTGCCCGGCGCCGCTGGAGAGCTGTGCGATGCCGTCGGCGAGGGTCACCGTGCCCTCGGCTGCGTCACCCGCCCCGTCGGCGAGCTGCGCGGCGCCG

>NZ_CP054038|5|5|800781-801161|CRISPRCasFinder
ACGTCGGGGAGCTGCGCAACGCCG	ACCGCCATCTGGTCGAGG
CCGTTCGCGAGGTCCCGTCCGCCG	GCGGCGATGTCGTTCGCGCCGGCCGCCCACCGGTCGAGGCCGTCCGCGGCGGCGGTCGTA
CCGGAGGCGAGCTGCGCGGTCCCG	GAGGCGATGCCGGCCGCACCCGAGGAGATGCCGTTTGCG
CCGTCGGCGAGTCCCGTCGCGCCG	GAGGCGAGCTCGTGGGCA
CCACCGGCGAGCTGTCCGACGCCC	GAGGAGATGCCGTTCGCA
CCGTCGGCGAGCTGCCCGGCGCCG	CTGGAGAGCTGTGCGATG
CCGTCGGCGAGGGTCACCGTGCCC	TCGGCTGCGTCACCCGCC
CCGTCGGCGAGCTGCGCGGCGCCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172988980.1|812927_815891_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213192
NZ_CP054038.1|WP_172988967.1|795847_796594_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235712
NZ_CP054038.1|WP_172988979.1|812662_812938_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	unknown	unknown	gnl|CDD|225170
NZ_CP054038.1|WP_172988973.1|804778_805435_+|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP054038.1|WP_172988964.1|791594_792644_-|DUF4185-domain-containing-protein	unknown	unknown	gnl|CDD|379383
NZ_CP054038.1|WP_172988965.1|793997_794960_+|DUF4432-family-protein	unknown	unknown	gnl|CDD|185695
NZ_CP054038.1|WP_172988963.1|788309_790439_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988975.1|806589_807390_+|LLM-class-F420-dependent-oxidoreductase	unknown	unknown	gnl|CDD|213873
NZ_CP054038.1|WP_172988972.1|801720_804651_-|MMPL-family-transporter	unknown	unknown	gnl|CDD|225272
NZ_CP054038.1|WP_172988974.1|805463_806492_-|o-succinylbenzoate-synthase	unknown	unknown	gnl|CDD|235084
NZ_CP054038.1|WP_172988977.1|811132_811708_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|223637
NZ_CP054038.1|WP_172988978.1|811747_812479_-|flavodoxin-family-protein	unknown	unknown	gnl|CDD|223728
NZ_CP054038.1|WP_172988966.1|794978_795860_+|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl|CDD|223257
NZ_CP054038.1|WP_172988970.1|798294_799314_+|mannonate-dehydratase	unknown	unknown	gnl|CDD|224231
NZ_CP054038.1|WP_172988981.1|815895_816444_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172988968.1|796590_797463_+|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl|CDD|369882
NZ_CP054038.1|WP_172988969.1|797479_798286_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235506
NZ_CP054038.1|WP_172988976.1|807445_811114_+|methionine-synthase	unknown	unknown	gnl|CDD|273959
NZ_CP054038.1|WP_172991489.1|790447_791608_+|lipase	unknown	unknown	gnl|CDD|238881
NZ_CP054038.1|WP_172991490.1|792701_793802_-|DUF4185-domain-containing-protein	unknown	unknown	gnl|CDD|379383

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172988980.1|812927_815891_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	7.41742e-52
NZ_CP054038.1|WP_172988967.1|795847_796594_+|SDR-family-oxidoreductase	gnl|CDD|235712	PRK06138, PRK06138, SDR family oxidoreductase.	2.43228e-64
NZ_CP054038.1|WP_172988979.1|812662_812938_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein	gnl|CDD|225170	COG2261, COG2261, Predicted membrane protein [Function unknown].	8.29253e-08
NZ_CP054038.1|WP_172988964.1|791594_792644_-|DUF4185-domain-containing-protein	gnl|CDD|379383	pfam13810, DUF4185, Domain of unknown function (DUF4185).	4.63027e-24
NZ_CP054038.1|WP_172988965.1|793997_794960_+|DUF4432-family-protein	gnl|CDD|185695	cd01081, Aldose_epim, aldose 1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism; they catalyze the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate and the histidine as the active site acid to protonate the C-5 ring oxygen.	1.48214e-11
NZ_CP054038.1|WP_172988968.1|796590_797463_+|SMP-30/gluconolactonase/LRE-family-protein	gnl|CDD|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	5.91356e-65
NZ_CP054038.1|WP_172988975.1|806589_807390_+|LLM-class-F420-dependent-oxidoreductase	gnl|CDD|213873	TIGR03856, F420_MSMEG_2906, probable F420-dependent oxidoreductase, MSMEG_2906 family. This model describes a small family of enzymes in the bacterial luciferase-like monooxygenase family, which includes F420-dependent enzymes such as N5,N10-methylenetetrahydromethanopterin reductase as well as FMN-dependent enzymes. All members of this family are from species that produce coenzyme F420; SIMBAL analysis suggests that members of this family bind F420 rather than FMN. [Unknown function, Enzymes of unknown specificity].	6.62399e-129
NZ_CP054038.1|WP_172988972.1|801720_804651_-|MMPL-family-transporter	gnl|CDD|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	5.67746e-104
NZ_CP054038.1|WP_172988974.1|805463_806492_-|o-succinylbenzoate-synthase	gnl|CDD|235084	PRK02901, PRK02901, O-succinylbenzoate synthase; Provisional.	1.0276e-153
NZ_CP054038.1|WP_172988977.1|811132_811708_+|AAA-family-ATPase	gnl|CDD|223637	COG0563, Adk, Adenylate kinase and related kinases [Nucleotide transport and metabolism].	1.78084e-12
NZ_CP054038.1|WP_172988978.1|811747_812479_-|flavodoxin-family-protein	gnl|CDD|223728	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only].	5.33283e-12
NZ_CP054038.1|WP_172988966.1|794978_795860_+|fumarylacetoacetate-hydrolase-family-protein	gnl|CDD|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	8.49103e-88
NZ_CP054038.1|WP_172988970.1|798294_799314_+|mannonate-dehydratase	gnl|CDD|224231	COG1312, UxuA, D-mannonate dehydratase [Carbohydrate transport and metabolism].	9.24418e-97
NZ_CP054038.1|WP_172988973.1|804778_805435_+|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.82897e-11
NZ_CP054038.1|WP_172988969.1|797479_798286_+|SDR-family-oxidoreductase	gnl|CDD|235506	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	3.72745e-68
NZ_CP054038.1|WP_172988976.1|807445_811114_+|methionine-synthase	gnl|CDD|273959	TIGR02082, Methionine_synthase, 5-methyltetrahydrofolate--homocysteine methyltransferase. This family represents 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), one of at least three different enzymes able to convert homocysteine to methionine by transferring a methyl group on to the sulfur atom. It is also called the vitamin B12(or cobalamine)-dependent methionine synthase. Other methionine synthases include 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP054038.1|WP_172991489.1|790447_791608_+|lipase	gnl|CDD|238881	cd01844, SGNH_hydrolase_like_6, SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	6.80258e-46
NZ_CP054038.1|WP_172991490.1|792701_793802_-|DUF4185-domain-containing-protein	gnl|CDD|379383	pfam13810, DUF4185, Domain of unknown function (DUF4185).	1.2028e-05

Protein sequences

>NZ_CP054038.1|WP_172988970.1|798294_799314_+|mannonate-dehydratase
MELIELLSPRPSRLWPLVKQCGVNGIAALMNGAEQDQRMFRSVGVAAEAASADRDLAPWSEKALARDIGVFAEGGFSVQVIEDTPPLDKARAGADGRDEQIEHVITQVRAMGNLGIPVLCYNWMAVTSWARTSIETRARGGALVTAFDAEHASAQDHVVEPGEVTAEQLWEALRYFLDAVVPEAEAAGVQLAMHPDDPPRPVVRGVPRIMSSVEGFRRLLDLNPSPANGITLCQGNFALMTDDLPSVIREFGERRRIGFVHFRDVAGTADDFVETFHDDGPTDMLACLNEYENVGFRGALRPDHVPTMAGEANDMPGYGTLGRLFALGYIRGLQEGLAK
>NZ_CP054038.1|WP_172988969.1|797479_798286_+|SDR-family-oxidoreductase
MKDHDGRTCLVIGGSSGIGRGACQALAAAGARVAVHGLDLDDAAQVAASIEESGGRAIAVAGDVRDPETSLQAVDTTLATFGSLDSLVVSSGIQRYGDVVETAVEEWDEVFDVNVRGAYLAARAALPAIRSTDSGTVVFVASVQGSASQPRVAAYSASKGALIALVRSMAVDEALHGVRVNSVSPGSIDTPMLRSSAEQASRAGGRHVEEVLAHWGTAHALGRVGDDAEVGEAIAFLAGPRSGFITGVDLRVDGGMMARLPAPIGELR
>NZ_CP054038.1|WP_172988968.1|796590_797463_+|SMP-30/gluconolactonase/LRE-family-protein
MRERNVVRDVRPIIRAEARVGEGPVTDPRTGRLCWVDILAGDLLQSDLDGGTTERWEFDTYLGAIAPRASQSGFAVAVAEGFGFAVDGALAIEDPVLADPQLRMNDAKCDPLGRLWAGSNDLAFASGRGSLHRWDGGGASTVIRSGLTLPNGLGWTEDAGTMILIDSMAGTVMRAPFDVDRGEVGDFVPFATVDDGLPDGLAVDREDCVWVAIWGASAVHRYDLSGRLIERVDMPVSQPSSCSFAADGTLYVTSAREGLSAEQLAREPLAGSVFAIDTDTRGVPVAAFAA
>NZ_CP054038.1|WP_172988967.1|795847_796594_+|SDR-family-oxidoreductase
MDGLTGLVAVVTGGGSGIGAATVAALRRAGAQVAVLDRQVPAHDDHAFACDVTDALAVDRVIAEVVSRFGRLDIVVNNAGIGATGDVAGNSDDEWRQVFDVNVLGVARVSRAALPHLRRSLHAAIVNTCSIVATIGVPQRALYSASKGAVAALTLAMAADHVAEGIRVNAVLPGTADTPWVSRLLEAADDPDAAAEALRRRQPMGRLVTAEEIAQAILYLASPLAGSTTGILLPVDGGMGGIRVPQKA
>NZ_CP054038.1|WP_172988966.1|794978_795860_+|fumarylacetoacetate-hydrolase-family-protein
MQLMRLGEAGAERPVVRVDDGFYVDVSDVVRDFDGDFFDHGLAGLAELVARRRDAGQVLPFAGERVGAPLARPHQILCIGLNFSDHAAESGMPIPPEPILFTKSPNTLVGPNDDVRLPPGSTATDWEVELGIVIGRRASYLSDIDEARDAIAGFVLCNDVSERSFQLDRGGQWSKGKSAATFNPCGPWIATRDEFDDNAPLAMWLDVNGVRRQTGTTGTMIFDPYFIVGYLSQFMVLEPGDLINTGTPPGVGLGMTPPTYLREGDVMTLGIERLGAQRQRVVATAPREVPWTA
>NZ_CP054038.1|WP_172988965.1|793997_794960_+|DUF4432-family-protein
MVANPAADRARPFTLCTERIRVDVDPGRGADVLQITDVASGVGILAATPWRRRADSIRAGRMAPSAIDATDRWLEQYRGGWQTLCPNAGPPRRVGGTEVGFHGEASVSAWDVEANDEASARLSLELFSVPVRIDRELRVEEARLIQTDVLTNLSRDRIDIDYVSHPAFGGEFLDGRCVVATDARSVSLDPGEHDLPSAEWPRLPGGDDGSDLRVVPPPGVPARTFGWLSDFDAGWYAITNADRGLEVRVEWDARTLPHAWWWQELNGSPEHPWFGRARIMAIEPASTTTSGSGRAASLSLEPTAQTRIEISVALSTTANR
>NZ_CP054038.1|WP_172991490.1|792701_793802_-|DUF4185-domain-containing-protein
MLVPAIPAAADPGAVSAPADTCALVDSTISAASSIDAERTAAFADYGNSGVGWTGGDSTYSLTLEDGRQAWFFSDTFLGPVDADLGRPLSTPFLNNSIVVDDGGVLSTVTGGTAEAPESIIGMTPEGNWHWIGDPELNKKGDVQIPLLQFERFGPGMWDWGWSANRLATLDGSTLEVSSITELPSEVGINWGSYTLSEGNTTYIYGINDIEGVRSAFVARVAGGDLSKQWKFWDGTRWAPNEADAVPVASYVANEFSVEPYRDGYLMVTQDTSELFSTRIVAQVSCSPTGPFTVAAELYRTPETGLFGSYGNPNVFTYNAHEHPENRDGDTLLVTYNVNSFVGDDLYDDVTIYRPRFVSVELTVTP
>NZ_CP054038.1|WP_172988964.1|791594_792644_-|DUF4185-domain-containing-protein
MTLTPSKLVASVRDLGVQFAGNEVDITGQDAVTSIELPEGETFWVFGDSVEGPFDTIRGFELTDVLSNTGAIVPLQDIAHGVKRFRYLADGSGTRARQLIGFIPPEHKSTQRLWAIHGVHTGGHLYLYYHRITMDPALDVFETFTLDGMGVARGDAEHRFERLAAPDGTYEWWKGDQPGFGVWVQRHGEHLYLWGSIQPESKSAGDMYLARVLPERIEDLSAYEYLVSAPTLAHPDRDVRWSETFTPTACLFSDVPNEMSSSWNPHLGCFISLTTYQRDNILVIRTAPELTGPWSEPEVVFRPERTSDAALFNAGKEHPEFARDGGKVTYMTFIDSTVYKPHLIEITFA
>NZ_CP054038.1|WP_172991489.1|790447_791608_+|lipase
MRGIDLGAVRLRGAVEIERTAHGILPHRLPAWARAQVPDTFMVQTSAESAGIRLAFRTAATTLELDVSARRMAPDEHVALPPSTYELTSGGVVVAFGAAVAGSRYLFSFEDPSGRIVDGPASTVRFDGLPGHETDYELWLPYTDAVEIRAFRADAPVRTAEEIGALRWIHHGSSISHGYRADSTAGTWPVVAALATGVDLTNLAFSGNAMLDPFTARTIRDRPADLITLKVGINLVNGDVMRMRAFRPALDGFLDTIREGHPSTPIVVISPILCAPVETAAGPTVQDPTRTYEWSIAGGTDADVALGKLSLQSIRSAIESVVERRRSTDPHLRYVDGLGLYGPDDARAMPLPDNLHPGPDVQRLIGERFVQSVLRPFLSEAAPMRR
>NZ_CP054038.1|WP_172988963.1|788309_790439_+|hypothetical-protein
MLTQTRHIPTVADLSADPVTHHYDDMVAPPGLTNNLGTVRVDHDLTSITAVQFPPVSQGLAATAVAFVDGRIFKSYGAPVTHEWRPDRVVRRADLPGLELETTTVAVPGTTAVAIDVRIRNSGSEHRSVEIMLSLAARVVAHGGAWLSAESPDARNEAAVDGARLVFADDGATAWSVQGVDVPATARLSGVAPTSEEFSIGVGGMGRGGDVTVVLEVAAGREARFGYVQAVGRTRDSAIGVFDAVAADIPGAISASEEYWNAQLEAAVTPGNPEFSGHLPVLETSSDALRRLYWWGILGILYFRRDYEGNVLGRSYDTLMPNYWGTTTFLWDFSLSSVTHALLDPAAMKRQLTHWIASDTHTLFGTSSLTGGAVGQWYSVNDYAMTRLVRDYVRFTGDDAFLDEQQADGRTVLDHLRFWARAWKGLRRSSKLADYGEIENLLECVSSYTHEVASFNAANVWNLRVTADALESRGDAAAAADLRAEADELVAAVLDLYLPGEGFFAAGQPDGTRLPVRHCYDFNIVGTSIADDISEEMRREMVAFFQRELQTPEWLRALSPWDPDASYSVRPDHQWNGAYTAWPADAARALVALGRADVAMDWLPGLARTANQGPPGQAHFVEEAQPLLNGGARKAPPQLPYINDWACSSSGAYVALVIESLFGAEPGLDGLADVKGSVAEMDPSAVLRGLRVGERLVDVHADGRVVDRA
>NZ_CP054038.1|WP_172988972.1|801720_804651_-|MMPL-family-transporter
MSTLLYSLGRWSYRHPWRVLIGWILLLAIAGGSAGIFMKGTDNSFSIPGTEAQEGIEMLDRTFPQASGTSAQLIIVAAEGDSVADDPYAGEIADTIAAFEDLDGVLAVTDPFDEMVSGLVSDDESAAIIRLQFDGSPTDISDETKDTLDGVAADMGESLPAGSEVAIGGDLYSTSVPGLTITEAIGVLIALFVLIITFRSLSVAFFPLISALIGVALAIALIFVSTAFATISSTTPMLAIMLGLAVGIDYALFIVARHQDQVRVGVEPEESAARATGTAGSAVVFAGVTVLIALVGLSFAGIPFLTTMGIAAAVAVAIAVVVAVTLTPALLGFAKGRVAGWGRVARAGVPVRRRRTAVAAADAADDAAELEPTEGVDAAPAAPAEPAVHATPAKTNPWVRLVTKHPIVTTVAVIVGLGVMAVPATSLTLALPNAGMQPESSQARVAYDLTAAHFGPGENGPLIMAGTIVTSTDPLGLMDDLAAEIEKVPGVKEVALATPNMTADTGLIQIVPETAPDDPATADLVRALRALAPELNDEYGVDLKVTGFTAVGIDISDRLGAALVPFGIFVVGLSLVLLMIVFRSIWVPLKAAAGYLLSVLAAFGVVAVVFEWGWFADLLHVDKTGPVISFMPIILMGVLFGLAMDYEVFLVSRMREDYVHALRAARATGEAFSRRRVAIDAVRSGFTASARVVTAAAVIMFAVFAAFVPEGDSSIKPIALGLAVGIAVDAFIVRMTLVPAVMALLGDRAWSMPQWLDRVLPHFDIEGEAVERELALSSWPEPNTTAAVVGEGVAVRADGGRTVGEVTLFDGADFRVERGGTLLVTGETLATRAFALTVAGRLQPDDGRLRVAGHLLPGRAAWVRGHVGLAMLRGSEDPLKDLRHALSGNTALVVVDGLDALDTGERDQAAALLRDAASRRRERRGDATSRLTVVVTARSEGAALGLLADAHRPDVAALALRTHTYSSADATPEVIA
>NZ_CP054038.1|WP_172988973.1|804778_805435_+|TetR/AcrR-family-transcriptional-regulator
MADAVVAMSRRREATRRKLMDAAAQVFAEVGLDAASVEAICERAGFTRGAFYSNFETKDELFLELVAAVAGERVEAVRRRVLHLEHDGELAGAHVDALGIVQQVLDITSDDRLGVLLMSEIRIHALRTPELATAYLAQEQAMLRSVSRIIDDIAEAKGLVFRVPADEAARLMLTVWESASMRAVMSGEDYEAMCASVNADLARVAQLIIEPPVAPTES
>NZ_CP054038.1|WP_172988974.1|805463_806492_-|o-succinylbenzoate-synthase
MDAVSLAAPPPLSEILASARVVALPLAARFRGVDVREAVVFEGPEGWTEFSPFAEYDDAEAATWLAAAIDFGWMPQPAPVRNVIPVNATVPAVTATAVADVLARFDGCRTAKVKVAERGQVLADDVARVRAVREVMGPEGRIRVDANAAWNVDEAEHAVHALAEFDLEYVEQPCATVDELAELRRRVKYMGIPIAADESVRKAADPLAVARAGAADLLVVKAQPLGGVRRALEIVAEAGLPAVVSSALDTSIGLSMGATLAAALPDLDYDCGLGTASLFLADVLSPGLAPRDGALPVGRVVPDPDLLDRHAASPERTQWWLDRLARCHSVLAATPEVAAEPL
>NZ_CP054038.1|WP_172988975.1|806589_807390_+|LLM-class-F420-dependent-oxidoreductase
MPLLDTPVRLGVQLVPQHVTYPQIREAVFRLEELGVDIIFNWDHFYPLSGEPDGLHFESWTELAAWAEQTERVEFGALVNCNSYRNPDLQADMARTIDHISAKGTGTGRFIFGTGSGWFQRDYDEYGYEFGTAGSRLDDLADGLARIEARWAKLNPAPTRDIPVMIGGQGEQKTLRLVARHADIWHSFVRPDALAHKISVIEKWAEKEGTDASRIVVSNELARRTPEVADALFDAGARLFTLNFDGPDYDYDLVKRWLAWRDAKNA
>NZ_CP054038.1|WP_172988976.1|807445_811114_+|methionine-synthase
MTGTAPAPRFALDIEGVPRPARSQALLDALAARVVIADGAMGTMLQRHDLSIETDFAGLEGCNEILNETRPDVVAAIHDAYYAVGVDAVETNTFGANWSNLSDYGIDDRIADLAEKGARIARERAEAAEAGDGRMRWVLGSMGPGTKLPSLGHTTYEHLRETFALQAEGLIDGGADAFLVETSQDLLQTKAAINGCKQAIVARGIRLPIFVEVTVETTGTMLMGSEIGAALTALEPLGVDAIGLNCATGPAEMSEHLRHLSKHSSVTIACMPNAGLPVLTADGAHYPLSPVELATAHEQFVREFGLGLIGGCCGTTPEHLAAVVERLGTGAHAAAAAGGSASQRVRVPAPDPGVASLYQHVPFQQDASYLAIGERTNANGSKAFREAMLEGRWDDCVEIARNQIRVGAHLLDVCVDYVGRDGVADVREVVSRFASASTLPLVIDSTEPAVIQAGLELIGGRPVVNSVNYEDGDGPASRFGRIMPLVKEHGTAVIALTIDEQGQARTADDKVRIASRLIDELVGDWGMRVDDIIVDCLTFPIATGQEETRRDAIETIEAIRTISAKYPGINTTLGVSNVSFGLNPAARVVLNSAFLHEAVEAGLTSGIIDAAKIVPLASISDEQRQVALDLVWDRREYDADGNVTYDPLATMLDLFAGVDTAALRDQRAAELAALPVGERLQRRIIDGESKGLEADLDLARAEGMTALGIINDQLLEGMKVVGERFGSGEMQLPFVLQSAEVMKTAVALLEPYMEKSDASGKGTIVLATVRGDVHDIGKNLVDIILTNNGYDVVNLGIKQPIADIIAAAEEHGADVIGMSGLLVKSTVVMKENLQELSARGLGTKWPVILGGAALTRAYVEDDLASLFDGEVRYARDAFEGLALMEPLVKIARGTDPGEVGLPALKKRRHAAGSKLTLTEPEAMPARSDVASDNRVPAPPFWGTRIVRGIALADYAAFLDERATFMGQWGLKPGRGEGGLSYEQLVEAEGRPRLRYWLDRILAEGMLDASVAYGYFPVVSEGDDLVVLHHGDDPTGVLGTPGLLAPDGGSPAGGELGAERLRFHFPRQRRDRHLCLSDFVRSRASGAVDVLPVQLVTAGAAIDQVTAKLFAEDRYRDYYELNGLVMQLTEALAEYWHARIRAELGFADEDPADIAGHFKLEYRGARFSLGYPACPDMEDRRKVVELLRPERMGVELSEELQLHPEQSTDAFVFHHPEAKYFSV
>NZ_CP054038.1|WP_172988977.1|811132_811708_+|AAA-family-ATPase
MLTADDPLPDAPRRVVVAGVSGVGKTTLAVRIAQVAGLPHTEIDALFHGADWVPRLEFVDDVLALVQTDRWVTEWQYRSARPLLTERADTLVWLDLPFATVTLPRVIGRTLRRRLRREELWNGNLEPPLHTFFTDPEHIVRWSVSTRGKYRERVPALAGQHPHLTIVRLRTPREVERWIAGPLTAAVGAAR
>NZ_CP054038.1|WP_172988978.1|811747_812479_-|flavodoxin-family-protein
MSGLTDAPAEYSDLRAVYINCTLKRSPELSHTQGLMDRSMDLMRGQGVSVEGIRFVDHDVATGVYPDMREHGWQTDAWPDEIWPKIDAADILVVGGPIWLGDNSSITRKLIERLYSMSGMLNDRGQYIYYGKTGGAIITGNEDGVKHSSMAILYSLQHIGFMVPPNADAGWIGAIGPGPSYLDPGSGGPESDFTNRNTTFMTWNLLHTARMLKDAGGLPAWGNVRRAWDGGEHFGFDANPEYR
>NZ_CP054038.1|WP_172988979.1|812662_812938_+|GlsB/YeaQ/YmgE-family-stress-response-membrane-protein
MLWTILGLILIGLIAGLIARAVIPGKQSMGILMTIVLGVVGSFVGGFLGFLLFGADPAGGFLQPAGIIGSIIGAILVLGIYVLATRNRVTR
>NZ_CP054038.1|WP_172988980.1|812927_815891_-|ATP-binding-cassette-domain-containing-protein
MTLRPGPLRAAAALAAGFVVVRVVYRVLFHGADGTGPVLLPLPEVRLPAPFAHVVMFGPVTADGLVDAAASAVPIAATILAFGVLSALVDLPRLIVRASARGPFSGLGRALAIAWATLPALADAARAVRFAQRLRGQRAGVRVLAPLLERTLERAAAVAATLEVRGFAGRGLEGDCVAAVETDGVGIGFGDAAGPVVHLDALTLAPGTLTLVTGATGSGKTTVLRAVAGLHSHVDGGIVDGRLRVVGHDRAAVPPRDLARRVGVVAQHPRSAFATEHVRDEIGLALVLRGVAPVIVAARVAEIAARVGVADLLDRRTARLSAGEATRVAIAAAVIEEPILLLVDEPLADLDAAARARIVALLDALAHEAGVCVVVAEHRADALREVADRRLRVADGRLRPLALDAGGGSTPDGRFQPLALDAGGGSTPDGVHIGGPIGPPAALASENPGGRAGAGSSVPRPSPAPPALRVTDLTVRHGAVVAVAAATVELAAGELVVLTGPNGAGKSSLLTAFALDRRVAGSLALVPDASDDLFVYDTVGAECARADRRARAGAATTAARFGGFLGLSPDSLALAARLARHPRDLSVGERRLLALSIQLAGDPGVLLVDEPTRGLDPAARDDVLAALTALTRRGVAVLVASHEPEVAAGADRVLRMERGVLRACKTPEIPAAIGAAPTPIGARQPDLPEFRTPRVAAPPPPAPPPPARPPGTPPRAARTTVTALAALAAANLVALAAFAWPLVATAVPDQAEAAVPVAALALLPLAALVVVATLDGRVRSAHLLALLGTLAAIGAAVRIASTGVGGVEALFILLILAGRAFGARFGMLLGMASIALSTLVTGTFGPWTPFQMFACAWVGAGAGLLPRRVRGGAEIAMLSVYGVVASYAFGLVMNLWFWPFAVGYGTGISYDGDAPLGVNLASFLLYSLVTSSLSWDTLRAITTIIGMLVVGRAVLAALRRAKPLQPATRSGPPAPARGRPRSDRVSA
>NZ_CP054038.1|WP_172988981.1|815895_816444_-|hypothetical-protein
MTSTRRLFPAAAAIAAALFALTACASGPAATETSAPAASSAPAESVGECSGVLVVIETGDLEVEDSPAGSTCIDTDEAIGASDALTEAGITVEGTEEFGDQVVCRVNGVPAEDLAIPAEDGSDYFETCASMPAAFAYWSLFTRPVAGQWGYATEGLATLELQPGESLALLFTLNGEPAAPTS

Crispr_ID: NZ_CP054038_6

• CRISPR_ID: NZ_CP054038_6
• CRISPR_location: 1139082-1139165
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_6

Consensus_repeat	Method
GGGTGCGGTGCTCGCGTGTGGTG	CRISPRCasFinder

spacers of NZ_CP054038_6

>6.1|1139105|38|NZ_CP054038|CRISPRCasFinder
GGCCCCGTGGGGCTCGAACCCACGACCCGCGGATGAAA

CRISPR arrays and Neighbor proteins around NZ_CP054038_6

CRISPR arrays

The CRISPR arrays of NZ_CP054038_6

>merge|NZ_CP054038|6|1139082-1139165|CRISPRCasFinder
GGGTGCGGTGCTCGCGTGTGGTGGGCCCCGTGGGGCTCGAACCCACGACCCGCGGATGAAAAGGTGCGGTGCTCGCGTGTGGTG

>NZ_CP054038|6|6|1139082-1139165|CRISPRCasFinder
GGGTGCGGTGCTCGCGTGTGGTG	GGCCCCGTGGGGCTCGAACCCACGACCCGCGGATGAAA
AGGTGCGGTGCTCGCGTGTGGTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172989239.1|1145800_1146901_-|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl|CDD|273373
NZ_CP054038.1|WP_172989227.1|1131043_1132261_-|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl|CDD|225133
NZ_CP054038.1|WP_172989230.1|1133671_1135342_-|nitrate-reductase-subunit-beta	unknown	unknown	gnl|CDD|224063
NZ_CP054038.1|WP_172989238.1|1144982_1145762_-|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|184587
NZ_CP054038.1|WP_172989233.1|1140815_1141997_+|anti-sigma-factor	unknown	unknown	gnl|CDD|182015
NZ_CP054038.1|WP_172989235.1|1142505_1142910_+|VOC-family-protein	unknown	unknown	gnl|CDD|319924
NZ_CP054038.1|WP_172989236.1|1142935_1143574_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP054038.1|WP_172989241.1|1147921_1149040_-|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl|CDD|270283
NZ_CP054038.1|WP_172989234.1|1142030_1142438_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197666
NZ_CP054038.1|WP_172989240.1|1146902_1147850_-|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl|CDD|273992
NZ_CP054038.1|WP_172989225.1|1128970_1129552_+|isochorismatase-family-protein	unknown	unknown	gnl|CDD|238493
NZ_CP054038.1|WP_172989229.1|1133039_1133675_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl|CDD|225091
NZ_CP054038.1|WP_172989226.1|1129556_1130966_-|protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP054038.1|WP_172989223.1|1125695_1126589_-|EamA-family-transporter	unknown	unknown	unknown
NZ_CP054038.1|WP_172989222.1|1125278_1125674_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172989231.1|1135341_1139043_-|nitrate-reductase-subunit-alpha	unknown	unknown	gnl|CDD|227346
NZ_CP054038.1|WP_172989224.1|1126655_1128974_+|MMPL-family-transporter	unknown	unknown	gnl|CDD|225272
NZ_CP054038.1|WP_172989232.1|1139304_1140690_-|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP054038.1|WP_172989228.1|1132257_1133040_-|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl|CDD|376889
NZ_CP054038.1|WP_172989237.1|1143906_1144791_+|aminodeoxychorismate-lyase	unknown	unknown	gnl|CDD|236114

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172989227.1|1131043_1132261_-|NarK/NasA-family-nitrate-transporter	gnl|CDD|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	8.19529e-95
NZ_CP054038.1|WP_172989230.1|1133671_1135342_-|nitrate-reductase-subunit-beta	gnl|CDD|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0
NZ_CP054038.1|WP_172989238.1|1144982_1145762_-|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|184587	PRK14241, PRK14241, phosphate transporter ATP-binding protein; Provisional.	0
NZ_CP054038.1|WP_172989233.1|1140815_1141997_+|anti-sigma-factor	gnl|CDD|182015	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK.	9.74106e-22
NZ_CP054038.1|WP_172989235.1|1142505_1142910_+|VOC-family-protein	gnl|CDD|319924	cd07263, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	5.28874e-28
NZ_CP054038.1|WP_172989236.1|1142935_1143574_+|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	0.00071993
NZ_CP054038.1|WP_172989241.1|1147921_1149040_-|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl|CDD|270283	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily. This subfamily contians phosphate binding domain found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBPII superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.6992e-68
NZ_CP054038.1|WP_172989239.1|1145800_1146901_-|phosphate-ABC-transporter-permease-PstA	gnl|CDD|273373	TIGR00974, 3a0107s02c, phosphate ABC transporter, permease protein PstA. This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions].	6.29275e-86
NZ_CP054038.1|WP_172989240.1|1146902_1147850_-|phosphate-ABC-transporter-permease-subunit-PstC	gnl|CDD|273992	TIGR02138, phosphate_transport_system_permease_protein_PstC, phosphate ABC transporter, permease protein PstC. The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions].	3.98813e-76
NZ_CP054038.1|WP_172989225.1|1128970_1129552_+|isochorismatase-family-protein	gnl|CDD|238493	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase). Nicotinamidase, a ubiquitous enzyme in prokaryotes, converts nicotinamide to nicotinic acid (niacin) and ammonia, which in turn can be recycled to make nicotinamide adenine dinucleotide (NAD). The same enzyme is also called pyrazinamidase, because in converts the tuberculosis drug pyrazinamide (PZA) into its active form pyrazinoic acid (POA).	8.89018e-59
NZ_CP054038.1|WP_172989229.1|1133039_1133675_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl|CDD|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	2.30063e-38
NZ_CP054038.1|WP_172989224.1|1126655_1128974_+|MMPL-family-transporter	gnl|CDD|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	6.45203e-85
NZ_CP054038.1|WP_172989226.1|1129556_1130966_-|protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	3.16114e-89
NZ_CP054038.1|WP_172989232.1|1139304_1140690_-|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.29957e-88
NZ_CP054038.1|WP_172989231.1|1135341_1139043_-|nitrate-reductase-subunit-alpha	gnl|CDD|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP054038.1|WP_172989234.1|1142030_1142438_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	3.6113e-24
NZ_CP054038.1|WP_172989228.1|1132257_1133040_-|respiratory-nitrate-reductase-subunit-gamma	gnl|CDD|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	1.57802e-118
NZ_CP054038.1|WP_172989237.1|1143906_1144791_+|aminodeoxychorismate-lyase	gnl|CDD|236114	PRK07849, PRK07849, aminodeoxychorismate lyase.	8.80569e-111

Protein sequences

>NZ_CP054038.1|WP_172989231.1|1135341_1139043_-|nitrate-reductase-subunit-alpha
MTPRVGVDGAASDALLAAGRYFTRWEQTPDHRAAFLTGGREGDAFYRDRWSHDKVVRSTHGVNCTGSCSWKVYVKDGIITWEAQQTDYPSVGPDRPEYEPRGCPRGAAFSWYTYSPTRVRYPYVRGVLLDAYREAKARTGDPVLAFGEVTTDPETRRRYQQARGKGGLVRATWAEAVELVAAGYVHTIKEYGPDRVAGFSPIPAMSMVSHCIGTRFTQLVGGVMTSFYDWYADLPVASPQVFGDQTDVPESGDWWDAAYLMMWGSNVPVTRTPDAHWMAEVRYRGTKVVTVSPDYADNTKFADEWLPCQAGTDAALAMAMGHVILKERYVDQRVPFFVDYAKTYTDLPHLITLVPHKDGGLVPGKFLTAADLGRTAPEDQWKTVVLDAASGAPRVPNGSMGFRYADAGEGSWNLDLGDIVPALSVRDAKVAEEPTEVLLPRFDAPDGSGAVLTRGVPATRVNGVLVTTVLDLMLAQYGVGRDGLPGQWPTGYDDATTPYTPAWQEDITGVPAEACTRIAREFAQNSIDSEGRSMIIMGAGICQWFHGDATYRAILAMLILTGAMGRNGGGWAHYVGQEKCRPITGWISLANALDWARPPRTMIGTAYWYMHTDQWRYDGYAADALASPLAEGNFTGMHTADTIAQSARLGWMPFYPQFDRNPLDLADQAAQAVEAGTAADAASFVVDQLRGGELNAAIADVDAPENWPRLLTLWRSNLMGSSAKGNEYFLKHLLGTHSNVMGTDEASIRPRDIAWRDEIPEGKLDLLVSADFRMTSTTLLSDVVFPAATWYEKHDLSSTDMHPFVHAFTPAIDPPWEARSDFDMFHAIARELSEMAKTHLGTRHDLVSVPMQHDTPGEISQPGGVVRDWARGDVAPIPGRTMPQLVVVERDYTAIADKLAAVGPLADTLGFTVKNVTYDVTHEVDRLAKQHGVYPSGAAAGRPAIDTDVKMAEAILTFSGTTNGELATQGFRTLEKRVGKPLADLAEGSEEKRITFPMTQSAPQPVITSPEWSGSETGGRRYAPFTVNIERLKPFHTLTGRMHFYLDHDWMRDLGEAMPIYRPPLDMHQLFGEPKLGRDGRKEVVVRYLTPHSKWSIHSEYQDNLFMLSLSRGGPTVWMSAEDAASILVKDNDWVECVNSNGVLVARAVVSHRMPEGVVYVHHAQERTIDVPKSEATGRRGGIHNSVTRLLVKPTHMIGGYAQLSYTFNYLGPTGNQRDMVATIRRRSQEVTY
>NZ_CP054038.1|WP_172989230.1|1133671_1135342_-|nitrate-reductase-subunit-beta
MRVMAQMGMVMNLDKCIGCHTCSVTCKQAWTNRAGTEYVWFNNVETRPGQGYPRRYEDQEQWRGGWTLNSRGRLTLRTGSRLKRLLTIFSSPVQPKLEDYYEPWTYDYETLIDAPLGDDFPVARPKSLITGEDTKITWSANWDDDLGGTSEMGHLDPIVEKVRRESEDKIKFSFEQTFMFYLPRICEHCLNPSCMASCPSGAIYKRAEDGIVLVDQDRCRGWRQCITGCPYKKIYFNHKTGKAEKCTLCYPRLEVGIPTVCSETCVGRLRYLGLFLYDADKVTAAAATPDEKDLYEAQLDLMLDPDDPEVIAAVKAQGDIPDDWMDAARRSPVYALAKKYRVALPLHPEYRTMPMVWYIPPLSPIVDLLRDQGHDAESAGTLFGAIEALRIPVEYLAELFTAGDTDIVTAVLYRLAAMRAYLRDITLDRERDESIPEAVGMTGETLYEMYRLLAIAKYEERYVIPTAHYERAHELEELGCSLDFDGGPYESGPFGEASGRVQPVAVETYQALRDRQTSDEGVSAESLRGRVNLLNWDGNGSPSGLFPARREPKGDA
>NZ_CP054038.1|WP_172989229.1|1133039_1133675_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MSQTRANRIVYQAASICLSYPDDAVLDAAPVVAAALHESAPHAAASFTPLLAWWQATPRSAVRTAYVDTFDMSKRHALYLSYWTDGDTRRRGGVLADLKQRYRDAGLALEGTGGELPDYVPLVLEFARHDPAAGAGLLQEYRASIELIRLALAERGSPYAGVVAAVCGTLPGHSPADRQQAMALASNGPPTESVGLDAYDPRLLPMATGGR
>NZ_CP054038.1|WP_172989228.1|1132257_1133040_-|respiratory-nitrate-reductase-subunit-gamma
MDVFLWGILPYLMVALLVGGTVWRYRYDQFGWTTRSSQLYESRLLRIGSPLFHFGILVVVVGHVIGLVIPKAWTDAVGVTEDMYHVMALGLGSIAGVATLAGVGILIWRRRTTGPVFMATTKNDKTMYVVLVAAIIAGLATTLISVFGPHQEVTYRETVAPWFRSLFIFQPDIAAMSAAGLDFQIHTVIGMVLFMIWPFTRLVHAFTAPVHYLFRPYIVYRSRDGRPTAAGGIRRGWAPVGTPDRTRDRSTSLRRDRSRR
>NZ_CP054038.1|WP_172989227.1|1131043_1132261_-|NarK/NasA-family-nitrate-transporter
MTATGATATPPQILPGRTKNLWLALLAFAITFWAWNLIAPLGVQYAANMGLDSTQTSILIATPVIVGSVGRIVTGALTDRYGGRLMFTVLTAVSAVPVVLVAIAGLNNSYALMIAFGFLLGIAGTTFAIGIPFVNAWYDPSKRGFATGLFGAGMGGTALSSFFTPRLVAAIGYLPTHLLMAGALLVVAAIVWFFMEDSPAWSPNTDPVMPKLAAASKLAVTWQMAFLYAVTFGGFVAFSTYLPTYLNNIYAYDLADAGARTAGFAIAAVIARPVGGWLSDRIGPAAVLMISLAGAAVMAVVIAFQPPPELAAGSSFVAMAAFLGLGTGAVFTWVAQRAPSERVGTVTGIVGAAGGLGGYFPPLVMGATYNADANNYTVGLSLLCATALVALVFTFFLSRRTRTSA
>NZ_CP054038.1|WP_172989226.1|1129556_1130966_-|protein-kinase
MPAIAPPSPGVVLGGRYVLAERIGQGGMSSVYRAHDTALDRTVAVKVMRAAPDDHAAVRRMRAEAAALGAVSHPGLVTLYDADVADDGSGFLVLEYVPGPTLRRRLDLGALSMVDAASIAVDLAEGLHAVHAAGIVHRDLTPSNVLLTEAETEPVRAKLADFGIAHLADWTRVTSPGMTVGTAAYLAPEQVRGDEPTAAADVYSLGLVLLEALTGERAFRSSTAPEILAARLTVGPAIPADLPPLWRSLLSSMTEIDPRDRPAAAEVASAGACLPLAAEGNPLDAATAPVRLPVAATPVARATGTRSLPAVPGNTPQRSAGSSHRARRRASRFGVLLAGAAAGAAIGVAGLSLSLAAAPSETTTVLEPRSIVAVTPPSTVTHTAVDSTPAPAQPDDPAQPADPAVAPAEGTAPDSPVGGTSATTGEEVSDNGGAGTAQKESEVRTGPGSGGNGSANGRGAEKGRGADAR
>NZ_CP054038.1|WP_172989225.1|1128970_1129552_+|isochorismatase-family-protein
MSKALFIVDVQNDFTEGGALGVEGGDAVAAAISRYLVTHGEEYAVIIASRDWHDGDGDNGGHFAAGEPDFVDTWPVHCVAGTEGAEYDAGLDTSAVTHHVKKGQGKPAYSLFEGTTDAGETVSQLLDAHGVVDVDVTGIATDYCVRASALDAVEHGRHVRILTDLVAGVAQASSEAALAELAHAGAELADSGA
>NZ_CP054038.1|WP_172989224.1|1126655_1128974_+|MMPL-family-transporter
MANPHHASRQPTRWLRIGIPVLLVLVWLVGGSIGGPYFGKVDEVSTNDRSSFLPESADATQVNERLPEFLGDDTIPAVVIVESDAALTDADLADLQTLADEIATIEGVQAEVSPPLASDDGDAAQIFVPIDSSGEIDAVVGEIRELLGEELPAGTEGWVTGPAGFTADLVEGFLGIDGLLLGVALIAVFLILVIVYRSPLLPVLVLLTSVFALCVALLTVWWLAYAGIFVLNGQVQGILFILVIGAATDYALLYVARYREAIADGFRRWEATLRAWRGAFEPILASGGTVIAGLLCLLLSDLATNRALGPIASIGIAFSMLSALTFLPALLALCGRAAFWPFIPKEPIATIPDDLSQPVKGLWPRQARFVARHARAVWIICTVVLLAGAVGITQLKADGVPTSDLVLGTSEARDGQAVLAEHFPAGSGSPVYVIVAEDDLADAVEVLDASDGVDAVSVASEDSPTGQAAVEVEDGEPVFTAVGPPGTPAPEPTLADGDVLVIGTLTDAADSVAAEDTVRELRTDLDSALGEGAAVVGGETATDIDTNDTSIRDRTIIIPVILLVIFLILMLLLRSVLAPVILIATVILSFGTALGVSALVFNGIFDFPGADPAVPLYGFVFLVALGVDYNIFLMSRVREESLVHGTRPGILRGLVATGGVITSAGLVLAATFAALGVIPILFLVQLAFIVAFGVLLDTFVVRSLLVPALSYDIGPAIWWPSKLWRKPVTGAGAPSAAAPARDAQLPVETDPELVADDGHPLTREEYRRNLDA
>NZ_CP054038.1|WP_172989223.1|1125695_1126589_-|EamA-family-transporter
MIAALVALVGAVVYGAADFFGGLATRQLRAVVVTGAAGLAGLVALALALPLLGGAWSARDAAWGALAGVFGAIALALLYACLAIGPMSILSPLTAVVSAIAPMLWGLLVKGESLSPIGYAGLGVALAAVVLVGFVPARHVVRPSLRGVTMAIGAGVAIGGFLIVIDLTEPASGLAPLVVSRATTVALTAAAIGAMLMGALRRGEPAASILAAPHATSGVRSRAWVAVVVCGLLDATANGAALAALRLGDLSIVSALTALYPAGTILLAGLVLRERIAAVQWAGLALALTAGAMLALA
>NZ_CP054038.1|WP_172989222.1|1125278_1125674_+|hypothetical-protein
MDSAIDAIVEIFTWVGLGTGAFLAVIALILSLFDGTWHPARAVIEEDGHGRFVRWFDEEGGVNEARLSHEQDHALAGATMADIFYRRGSRGRMRLTPGSPVVRGFLRIAIGLLALGLVALVLSGVLLFARG
>NZ_CP054038.1|WP_172989232.1|1139304_1140690_-|serine/threonine-protein-kinase
MSGPDLRAGDEPVTGEVLDGRYRLEERIGEGGMAQVYRAEDLSLHRIVAIKLLRPSVDGATSVERARAETTLLASLNHPSLVTLHDARLRPDGGGYLVMEYVDGPTLRDLIAQGPVDPVEAAGLLAAIAEGLHVAHEAGIVHRDIKPSNMLLTRSPVPGERWRPKLADFGIAYLDDTSRLTTPGLVIGTIAYLAPEQATGTVTPAPAADVYGLGITFLEVLTGSRPFPDAQGIGTLVARMSTPPSIPQDLDAAWQGLLRGMTVLRPEDRPTALEVHRAAAALAGRAAPPEAAGPASTIAATPITVAAPAPTIASTAARRDDQPTAPTLAATAVLPPVPPLPPQPQVAASPPQRPARRARRRAVVIGAAAAAAAGAIAIIVSMSMLSPAGQVAPTPSAPVVSESPEPTPVPVTPAEDDDTEPVENDNSGPGNSNGNGNGNGNGNGNDNSGPGNNNGNGNGNG
>NZ_CP054038.1|WP_172989233.1|1140815_1141997_+|anti-sigma-factor
MAIDGGVPSARDSAAADHVGELLVRVADGDQRAFARVYDLLSRRAYGVILSAVGEPATSEATLQEAFLEVWRTASSFDPSREVGRPWVLGLVQRRALAAAAERGEDATPGPEGDAAPPLGLRSRLLARISDAPQAGSAAAQTRAARRAAAATAGAGETGATIGGTPPGDGAEPTAPGAEAAATEDPATEVTATGAAAALLTPAATRPAATHPGAAAPGASAPALEPAPTTTVMQAIERRNWTQGLLILAAALVGLTVLGFASVTVNEYLNRPEAVQALERIEASDDGRSATTELTEGGIATAYWSAAEGEAVVVTEDLPTLTSDQDFELWLFREGAAIRAGIVEPATTGETVALLDARYQDGDEIQITIEPAGGSPEDVPSGTPIFVVPTATG
>NZ_CP054038.1|WP_172989234.1|1142030_1142438_+|helix-turn-helix-transcriptional-regulator
MASTPQSPQTLVHLRRARDLIDRAYAEPLDVPTMAARAHMSPAHFSREFKSAYGETPYAYLMTRRIERAMALLRDGSSVTDACTAVGTTSLGSFSSTFTQIVGETPSAYRARPHDAAEAMPLCIARILTRPTRYA
>NZ_CP054038.1|WP_172989235.1|1142505_1142910_+|VOC-family-protein
MSISLAYCPITVDDVDAAVPFYRDGLGLEVVNDVAYQEHRWVSFGFAGQPGLAAVVSDPGAGRSPDDADALERLVVKGSAPGPYVFTTSDLDATFERLRAWGAEVLQEPIAQDWGPRDCAFRDPAGNHIRINQA
>NZ_CP054038.1|WP_172989236.1|1142935_1143574_+|response-regulator-transcription-factor
MSDASRDFHKPVRRPAELFDRLFAAEDPAEISRAAHSTAQALLSRVRADPDAAIIDRLVSFTGEHGIDDIAELWSRSPAKTLPGALWRLYLLQLMIHDDPRTAALLYERGRVELPSVDDVIAGAPSPAGPEELVALVDTILRGLFEGDFAVALDRAAAFCRVQASGATHLADDYEGTESDRASALTTRALRLSDYAVDLTACAALWRRDALT
>NZ_CP054038.1|WP_172989237.1|1143906_1144791_+|aminodeoxychorismate-lyase
MTWRYALVIDPVDADDDRTTWDDTFTVIDPSAPALSVGELSTQRGDGIFESIGVVDGHAQEVGPHLERLAHSARLCDLPAPHLAQWRAAIAEAAAHCPAGEAVIKLILSRGVEHGPAPTAWVTAAVAADNSAPRERGIRVVVLDRGFDSGAPDRAPWLLLGAKTLSYAVNMAAIREARRRGADDAVFVSSDGILLEGPTSSLIVRHGSRFSTPAPGAGILHGTTQLSLFADLERRGFETAYGDLRLGDLTGADAAWLVSSVRLAAPITTVDQTPIPVDAALTASINEYLLSPRD
>NZ_CP054038.1|WP_172989238.1|1144982_1145762_-|phosphate-ABC-transporter-ATP-binding-protein
MSKSIEVNDLNVYYSDFLAVEGVSLDIEPRSVTAFIGPSGCGKSTFLRTLNRMHEVIPGARVEGEVLLDGDNLYAPNVDPVLVRRQVGMVFQRPNPFPTMSIKENVLAGVKLNNKKMSKSDADALVEKSLSGANLWNEVKDRLDKPGSGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPISTYAIEELIGELKNDYTVVIVTHNMQQASRVSDKTAFFNIAGTGKPGKLIEYDDTKTIFTTPSVQATEDYVSGRFG
>NZ_CP054038.1|WP_172989239.1|1145800_1146901_-|phosphate-ABC-transporter-permease-PstA
MTVTTAPPQTPPSVPETPRLTSGQLPKWAPWVLIVLSAVVSAAIFGVFALTGDAGFNVAGFAVVTALVYLALIAISSSMVEGRRKAVDRLVTGVVSIAFLIAMVPLVSVAATVVVNGVAGISADFFTMSMRNVVGEGGGALHAIVGTLLITLAAAVISIPIGIFTAIYLVEYGDGSRLSRAITFLVDVMTGIPSIVAGLFAYAVFALIFGPGIRMGIMGSIALAVLMIPVVVRSTEEMLRLVPNELREASYALGVPKWRTIAKVVLPTSMAGITTGVMLSISRVIGETAPLLLTAGVTTSMNYNLFDGRMMTLPVFAYSQYMNQGIPAQAFIDRAWAAALVLIVIVMLLNLIARLVAKVFSPKLGR
>NZ_CP054038.1|WP_172989240.1|1146902_1147850_-|phosphate-ABC-transporter-permease-subunit-PstC
MTTTTTAPAEKVKQRPGDRWFSGTALGAGLMILVTLAAVAIFLIVQSIPGLVASPEEARILGGSNFWQYVWPLVFGTVWASLLALLMAVPLAVSVALFISHYAPRRIAQGLGYAVDLLAAVPSVVYGLWGILVLAPAVQPVYAWLNANVGWFPLFGGTVSSTGRTIFTAAIVLAMMVVPIITAICREIFLQTPVLHEEAALALGATRWEMIRMAVFPFGRSGIVSASMLGLGRALGETMAVAMVLSISNRVTLELFTSDNPGTIPANIALTFPEAFGVNVNVLIATGLILFVVTFAVNAVARWIVSRRKEFSGAN
>NZ_CP054038.1|WP_172989241.1|1147921_1149040_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MKISRIAQLGAVAAVAALTLAGCAANEGTTGGDASEAPESMLAGEIAGGGASSQEVAVNAWVAGFQTANPDVTITYDPAGSGAGRESFQAGAFPFAGSDRAFEVEEIEAGPFDGCVEGTGIIELPTYISPIAVIFHIEGVDALNLSPEVIAGLFAGTITNWNDPAIAALNEGVELPDLAVTPVHRADDSGTTENFTDYLFQAAGDVWTYEPDGVWPGTPVAGEAAQGTSGVVSAVAGGNGTIGYADASRAAEEGLATAAVQVGDEFVEYSPEAAAAIVDASPFAEGREEGDLAIELDRTSTEAGVYPIVLVSYMIACQEYVDTEAAPIVKGFLEYLASAEGQDAAAAAAGNAPISDTLRDQVNAAIELIVAE

Crispr_ID: NZ_CP054038_7

• CRISPR_ID: NZ_CP054038_7
• CRISPR_location: 1418518-1418617
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_7

Consensus_repeat	Method
CGAGCGCCCCACGAACCGCCGGCCTT	CRISPRCasFinder

spacers of NZ_CP054038_7

>7.1|1418544|48|NZ_CP054038|CRISPRCasFinder
GTGATCCGTGGGGCGCCTCCGGCCGTTTCGGGGGCGTGGATGCCGCGG

CRISPR arrays and Neighbor proteins around NZ_CP054038_7

CRISPR arrays

The CRISPR arrays of NZ_CP054038_7

>merge|NZ_CP054038|7|1418518-1418617|CRISPRCasFinder
CGAGCGCCCCACGAACCGCCGGCCTTGTGATCCGTGGGGCGCCTCCGGCCGTTTCGGGGGCGTGGATGCCGCGGCGAGCGCCCCACGAACCGCCCGCCTT

>NZ_CP054038|7|7|1418518-1418617|CRISPRCasFinder
CGAGCGCCCCACGAACCGCCGGCCTT	GTGATCCGTGGGGCGCCTCCGGCCGTTTCGGGGGCGTGGATGCCGCGG
CGAGCGCCCCACGAACCGCCCGCCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991541.1|1413992_1414499_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670
NZ_CP054038.1|WP_172991542.1|1425180_1426227_+|aldo/keto-reductase	unknown	unknown	gnl|CDD|381376
NZ_CP054038.1|WP_172989437.1|1408206_1408908_+|chlorite-dismutase-family-protein	unknown	unknown	gnl|CDD|377705
NZ_CP054038.1|WP_172991543.1|1427197_1428550_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|234945
NZ_CP054038.1|WP_172989451.1|1429512_1430196_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|224095
NZ_CP054038.1|WP_172989448.1|1423383_1425000_-|stealth-conserved-region-3-domain-containing-protein	unknown	unknown	gnl|CDD|371500
NZ_CP054038.1|WP_172989441.1|1415461_1417039_+|methionine--tRNA-ligase	unknown	unknown	gnl|CDD|237012
NZ_CP054038.1|WP_172989443.1|1417953_1418472_+|NUDIX-hydrolase	unknown	unknown	gnl|CDD|239217
NZ_CP054038.1|WP_172989444.1|1418632_1419937_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP054038.1|WP_172989438.1|1408904_1409834_+|hydroxymethylbilane-synthase	unknown	unknown	gnl|CDD|234612
NZ_CP054038.1|WP_172989446.1|1421511_1422357_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl|CDD|234708
NZ_CP054038.1|WP_172991539.1|1409860_1410826_+|porphobilinogen-synthase	unknown	unknown	gnl|CDD|236450
NZ_CP054038.1|WP_172989447.1|1422506_1423439_+|phosphodiesterase	unknown	unknown	gnl|CDD|277347
NZ_CP054038.1|WP_172989449.1|1426223_1427156_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	unknown	unknown	gnl|CDD|235110
NZ_CP054038.1|WP_172989440.1|1414508_1415342_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	unknown	unknown	gnl|CDD|223390
NZ_CP054038.1|WP_172991540.1|1412188_1413715_-|phospholipid-carrier-dependent-glycosyltransferase	unknown	unknown	gnl|CDD|224839
NZ_CP054038.1|WP_172989442.1|1417038_1417950_+|TatD-family-hydrolase	unknown	unknown	gnl|CDD|238635
NZ_CP054038.1|WP_172989450.1|1428667_1429516_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213262
NZ_CP054038.1|WP_172989439.1|1410822_1412166_+|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl|CDD|234607
NZ_CP054038.1|WP_172989445.1|1420012_1421458_-|sugar-porter-family-MFS-transporter	unknown	unknown	gnl|CDD|340917

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991541.1|1413992_1414499_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.37617e-13
NZ_CP054038.1|WP_172991542.1|1425180_1426227_+|aldo/keto-reductase	gnl|CDD|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	4.73542e-175
NZ_CP054038.1|WP_172989437.1|1408206_1408908_+|chlorite-dismutase-family-protein	gnl|CDD|377705	pfam06778, Chlor_dismutase, Chlorite dismutase. This family contains chlorite dismutase enzymes of bacterial and archaeal origin. This enzyme catalyzes the disproportionation of chlorite into chloride and oxygen. Note that many family members are hypothetical proteins.	3.7029e-81
NZ_CP054038.1|WP_172991543.1|1427197_1428550_+|GNAT-family-N-acetyltransferase	gnl|CDD|234945	PRK01346, PRK01346, enhanced intracellular survival protein Eis.	1.52471e-95
NZ_CP054038.1|WP_172989451.1|1429512_1430196_+|ABC-transporter-permease-subunit	gnl|CDD|224095	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism].	6.66597e-36
NZ_CP054038.1|WP_172989448.1|1423383_1425000_-|stealth-conserved-region-3-domain-containing-protein	gnl|CDD|371500	pfam11380, Stealth_CR2, Stealth protein CR2, conserved region 2. Stealth_CR2 is the second of several highly conserved regions on stealth proteins in metazoa and bacteria. There are up to four CR regions on all member proteins. CR2 carries a well-conserved NDD sequence-motif. The domain is found in tandem with CR1, CR3 and CR4 on both potential metazoan hosts and pathogenic eubacterial species that are capsular polysaccharide phosphotransferases. The CR domains appear on eukaryotic proteins such as GNPTAB, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta. Horizontal gene-transfer seems to have occurred between host and bacteria of these sequence-regions in order for the bacteria to evade detection by the host innate immune system.	7.46654e-59
NZ_CP054038.1|WP_172989441.1|1415461_1417039_+|methionine--tRNA-ligase	gnl|CDD|237012	PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP054038.1|WP_172989443.1|1417953_1418472_+|NUDIX-hydrolase	gnl|CDD|239217	cd02883, Nudix_Hydrolase, Nudix hydrolase is a superfamily of enzymes found in all three kingdoms of life, and it catalyzes the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+ for their activity. Members of this family are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site. Substrates of nudix hydrolase include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance and "house-cleaning" enzymes. Substrate specificity is used to define child families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required. This superfamily consists of at least nine families: IPP (isopentenyl diphosphate) isomerase, ADP ribose pyrophosphatase, mutT pyrophosphohydrolase, coenzyme-A pyrophosphatase, MTH1-7,8-dihydro-8-oxoguanine-triphosphatase, diadenosine tetraphosphate hydrolase, NADH pyrophosphatase, GDP-mannose hydrolase and the c-terminal portion of the mutY adenine glycosylase.	2.9624e-19
NZ_CP054038.1|WP_172989444.1|1418632_1419937_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.92967e-55
NZ_CP054038.1|WP_172989438.1|1408904_1409834_+|hydroxymethylbilane-synthase	gnl|CDD|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	1.32573e-114
NZ_CP054038.1|WP_172989446.1|1421511_1422357_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl|CDD|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	1.41444e-118
NZ_CP054038.1|WP_172991539.1|1409860_1410826_+|porphobilinogen-synthase	gnl|CDD|236450	PRK09283, PRK09283, porphobilinogen synthase.	0
NZ_CP054038.1|WP_172989447.1|1422506_1423439_+|phosphodiesterase	gnl|CDD|277347	cd07402, MPP_GpdQ, Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	1.89961e-72
NZ_CP054038.1|WP_172989449.1|1426223_1427156_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase	gnl|CDD|235110	PRK03188, PRK03188, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional.	1.27981e-125
NZ_CP054038.1|WP_172989440.1|1414508_1415342_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase	gnl|CDD|223390	COG0313, COG0313, Predicted methyltransferases [General function prediction only].	4.52819e-109
NZ_CP054038.1|WP_172991540.1|1412188_1413715_-|phospholipid-carrier-dependent-glycosyltransferase	gnl|CDD|224839	COG1928, PMT1, Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones].	3.54226e-26
NZ_CP054038.1|WP_172989442.1|1417038_1417950_+|TatD-family-hydrolase	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	4.50309e-89
NZ_CP054038.1|WP_172989450.1|1428667_1429516_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213262	cd03295, ABC_OpuCA_Osmoprotection, ATP-binding cassette domain of the osmoprotectant transporter. OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.0492e-125
NZ_CP054038.1|WP_172989439.1|1410822_1412166_+|glutamate-1-semialdehyde-2,1-aminomutase	gnl|CDD|234607	PRK00062, PRK00062, glutamate-1-semialdehyde 2,1-aminomutase.	0
NZ_CP054038.1|WP_172989445.1|1420012_1421458_-|sugar-porter-family-MFS-transporter	gnl|CDD|340917	cd17359, MFS_XylE_like, D-xylose-proton symporter and similar transporters of the Major Facilitator Superfamily. This subfamily includes bacterial transporters such as D-xylose-proton symporter (XylE or XylT), arabinose-proton symporter (AraE), galactose-proton symporter (GalP), major myo-inositol transporter IolT, glucose transport protein, putative metabolite transport proteins YfiG, YncC, and YwtG, and similar proteins. The symporters XylE, AraE, and GalP facilitate the uptake of D-xylose, arabinose, and galactose, respectively, across the boundary membrane with the concomitant transport of protons into the cell. IolT is involved in polyol metabolism and myo-inositol degradation into acetyl-CoA. The XylE-like subfamily belongs to the Glucose transporter -like (GLUT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.35842e-141

Protein sequences

>NZ_CP054038.1|WP_172989443.1|1417953_1418472_+|NUDIX-hydrolase
MSDDERWDVTDAAGIPTGRTHRRGDPDFPSGLFHVVASVCVVRPDGLVLMTRRAAVKDWALCWEFPAGSALAGESSAEGAARELAEETGVAVEPGALIPVGRVVEPTALFDLYVVHLPGDPALALDPDEVCESAWVPLAEAMRRSAAGEMAGPWVPRLEVLGDRLTALAAGV
>NZ_CP054038.1|WP_172989442.1|1417038_1417950_+|TatD-family-hydrolase
MSHAPVPYPAEGTDPSTYVRTRDKGSRDVSYPAAPEPLAVPVYDNHAHLEIEDGVGLSLDEQLSRAGEVGVIGVVQAGGDIDSSRWSAWAAASHPRVLAAVAIHPNEAPAYAAAGRLDEAIAVIDELAAQSRVRAIGETGLDFFRTGADGLAAQYESFEAHIALAKKHGIAMQIHDRDAHDEVLATLERVGAPEKTVFHCFSGDAEMARIAGERGYWLSFAGNVTFKNAQNLRDALAVIPRERILVETDAPFLTPTPHRGRPNAPYLIPVTVRFMAEELGLDPDELCAQIAANTLEVYGAFED
>NZ_CP054038.1|WP_172989441.1|1415461_1417039_+|methionine--tRNA-ligase
MTSGRSFYITTPIYYPSDVPHIGHGYTTVAVDTLARWHRQSGDDTWMLTGTDEHGQKMMRAASANGVTPQEWVDKLVTEAWFPLLEKLDVANDDFIRTTQPRHEERVQAFVQAIYDRGYIYAGEYEALYCVGCEEFKPESEIVDGTGAFEGLKVCAIHSKPLELLQEKNYFFKLSEFQDKLLDLYTGVPDFLRPESAKNEVVSFVKNGLKDLSISRSAFDWGITVPWDPAHVIYVWVDALLNYATAIGYGTDPEQFARRWPAYHVVGKDILRFHAVIWPAMLMAAGLEVPRGVFAHGWLLVGGEKMSKSKLTGIAPTEITDVFGSDAYRFYFLSAIAFGQDGSFSWEDLSARYQAELANGFGNLASRTTAMIERYYEGIVPTPAEYTEADLAIRKTVADAAAAADAAIERFRIDEAISSIWTIVDALNLYITENEPWALAKDETQRARLGTVLYTAAEGLRALAVLLSPVMPVSTEKLWVALGAAESLGRLQDQPLREAGGWGVLAPGSSVTALAPLFPRVEQTV
>NZ_CP054038.1|WP_172989440.1|1414508_1415342_+|16S-rRNA-(cytidine(1402)-2'-O)-methyltransferase
MLILAATPIGNLGDASRRLIEALETVPVVAAEDTRTTQRLLQALGVSHRPRLIALHDHNEKARAGELVELAREQDVLLLSDAGMPTVSDPGYGVVAAAAAAGVAVTAIPGPSAVLTALAVSGLPTDRFTFEGFVPRKSGERRAVFAALAAEPRTMVFFDAPTRVGATLADMSAVFGAPRAAAVCRELTKLHEEVARGSLAELVAWAHDGVRGELVIVVAGAAPRAVAFDDAVAQVADLVASGTRLKEAAGEVATLTGHSSRELYQAALAARAAGGRG
>NZ_CP054038.1|WP_172991541.1|1413992_1414499_+|MarR-family-transcriptional-regulator
MSGYWYGDDADSRRRRAVSLLQSFRLYRAAEVAMRRRTRDAMAMGENDLLVLRYLLKAQREQRPVTPAALARYLGVSTASMTAIVDRLERSHHVSRRPHPTDRRSIVVVPTTETDEEVRATLGGMHERMLAAVVDMTPEETRIVMDCLQRLQAAVDEVHADVSGGADA
>NZ_CP054038.1|WP_172991540.1|1412188_1413715_-|phospholipid-carrier-dependent-glycosyltransferase
MHDDPRAARLYAWLAPALVVVLAGILRFWNLAHPHDLMNQFDETYYVKDAWSLANLGYEGAWPQDANERFLSGDVDAFTSSPAFVVHPPLGKWIIALGMLLFGPDNGFGWRFTTALLGTAAVLVLMLLARRMTRSTTFAVLAGLLMAVDGLAISMSRVALLDSTLMFFVILAFLFLVLDRERTMERIAMTVAARWSDEGGPYWGPLLWNRPWVIAAGAALGAASAVKWSGVWVLAGVGVYLVVTDALARRRAGVLLWPTDALRQGAVSFLLLVPVALLVYLTSWTGWLVTDGGYDRHSADDDPATGLWAWVPLSLQSLWSYHVHMYNSASGIVSPHAFASPAWQWPLLLRPTTIYFHHDALGEAGCAFEKGCSQAIATMPNPLLWYAGVAAAVYLLYRFWVRRDWRDAVVITGIASTYAPWLLFPERTVFQFYTVLVLPFLLLALATALRDIAGPRHADPYRRLTGQRLVWVFLGVAIALSAFWYPVVTAIRVPYVFWHAHIWLTGWA
>NZ_CP054038.1|WP_172989439.1|1410822_1412166_+|glutamate-1-semialdehyde-2,1-aminomutase
MTATTATTNDTAAARARAVIPGGVNSPVRAFGSVGGTPLSIVAARGAHVTDVTGREYVDLVASWGPALLGHAHPEVVRAVQDAAARGLSFGASTPAETELAELVIDRLTVGDVRGIERLRLVSTGTEATMTAIRIARGATGRDVIVKFAGHYHGHSDGLLAESGSGVATLGLPGSAGVPADIAALTLVLPYNDRDAVEAAFAAHPGRIAAIITEAAGANAGVLAPEPGFNRFLTETAHAHGALLILDEVLTGFRVGPAGRWGLEQATADGGWTPDLITFGKVIGGGMPLAGIGGRAAHMELLAPLGPVYQAGTLSGNPLAVAAGIATLRRADAAVYERVDAAAAAVSAGLHDALTAEGVVHEISRAGSLFSVAFRDGAVRNYDDARAQESWRYAPFFHAMLDAGVSLPPSVFEAWFLTAAHDDAVVGRVLDALPAAARAAASAPAPA
>NZ_CP054038.1|WP_172991539.1|1409860_1410826_+|porphobilinogen-synthase
MRARRLRATPAWRRLVRETHLEPSRLVLPLFVREGAEHPTPIASMPGVVQHSLDSLKAELHRAATAGIGGVMIFGVPEHKDAEGSGATDPDGILNVATRVAVAEAGNALVVQTDLCLDEFTDHGHCGVLDARGRVDNDATLVRYRDMALAQAEAGSQLLGLSGMMDGQTAVIRAALDQAGRTDVALLAYAAKYASAFYGPFREAVQSSLEGDRRTYQLDPANRREGALEVSLDVAEGADIVMVKPAMSYLDVLADAAASSPVPVWAYQVSGEYSMIEAAAAHGWIDRERAIDESLVGILRAGADAVLTYWAVEVAERITRA
>NZ_CP054038.1|WP_172989438.1|1408904_1409834_+|hydroxymethylbilane-synthase
MSAAPLRIGTRGSALATAQAGTVAEALGGELVIIQSEGDRSTASLASLGGAGVFAAALREALLAGEVDAVVHSYKDLPTAPMLGLSIAAVPRREDPRDALCARDGLTLDTLPEGATVGTGSPRRRAQLARRRPDLVLVDIRGNVDTRLGRLRTDDPERALDAVVLAAAGLARLGLLDAVTEFLDIDAWPTAPAQGALAVETRTGDEALARRIDHPATRRAAEAERGVLARLEAGCAAPIGARSFEEDGILFLTASVYSPDGSGHLTSSHAAAIDVDAAADVAERVAAELIAVGAADLAPLGAAAAEEDR
>NZ_CP054038.1|WP_172989437.1|1408206_1408908_+|chlorite-dismutase-family-protein
MTEQTEQTAPASSGTAPAEATDYYTLWAVLRRHPHTPAAAEDGPALADAIAGLESLRGIYDVSGLRADADIMLWLTGPSAQQLQAELRMLRRTRELAGLLPTWNALGVHRDAEFSRDHMPAFARGLAPKDWVTVYPFVRSYEWYLLPAAERGEMLRDHGLKGREYPQVLSNTVASFALGDYEWLLGLEADDPVDLVDLMRHLRATEARRHVREEIPFFTGRRISADEVAEVIA
>NZ_CP054038.1|WP_172989444.1|1418632_1419937_-|MFS-transporter
MPSLGELVAPRRLGRDFRWLMASSWTSNLGDGIALAAAPLLIASLTSSPILVAAGAVMQFLPWLLFGLLAGAVADHHDRRRLVMLANALRAVVVLVLVGFLVTGYANVWLVLVAAFLYGTAEVFADSAGSTLLPMLVRPVDLGIGNARLQAGYLVANQLAGPPLGAFLFAVGSFWPFLLQVLCVSLAVLLISRIARTPVPEHAGDGRGSKGHAIREGLRWLAGNAPVRTLIIIILVFNVTWAAPWGVLVLYATEHLGMGAVGYGALMTASALGGLVGTGSFGWLERHVSFATLMRVCLSLEVLMHLAFALLTTEWVAFVIMFGFGMYAFVWGTISTTVRQRLVPLPLQGRIASVNMVGVFGGLVIGQALGGVIAQIWGLTAPWWFAFVGSAITLLLVWRSISHIAAAKPVIGGDAAAATDAAPEPGDGGIPLRD
>NZ_CP054038.1|WP_172989445.1|1420012_1421458_-|sugar-porter-family-MFS-transporter
MNDSHGIPADTFSWKSPYGRRAIGLSVAAAVGGFLFGFDSSVVNGAVESIQTDFALNDFVTGFVVAIALLGCAAGAMLAGNLADKWGRLRVMFLGAIMFFLSSIGAGLAFSVWDLALWRVIGGLGIGIASVVAPAYIAEIAPKQIRGSLASLQQLAITIGIFTALLSDALLEGIAGGADNVLWLGLEAWRWMFLVGVVPAAVYGILSFTVPESPRFLISQGRADQAREIFAQLVPPVDLDKTMTELTRAIETDRKNAGVSIRGKALGLQPIVWIGIILSVFQQFVGINVIFYYSTSLWNSVGMTNAPLISVITSVTNVLVTLVAIFLVDRVGRKPILLTGSVVMAVSLGLMAISFLFAEGTGQDVSLPSPWGPIALVAANLFVIGFGASWGPLVWVLLGEIFPSRIRGKALGVAAGAQWIANFLITMTFPVMSGWSLPLTYGMYATFAALSFVFVLLRIPETKGMELEQTETLFARPAKKR
>NZ_CP054038.1|WP_172989446.1|1421511_1422357_+|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MSVSLLGAAEIRALAADLDVTPTKKLGQNFVVDANTVRKIVHVAGVEPADRVVEVGPGLGSLTLAILETGASVTAVEIDHRLAGRLPATAAAHGVPGDRLTVVDADALSVRDLPGDPTVLVANLPYNVSVPVLLHFMETFPGLQRGVVMVQAEVGERLAAPPGSKVYGAPSAKAAWYGPWRLAGTVSRQVFWPVPNVDSVLVGFTRDPEPRGGEDLRRRTFAIVDAAFQQRRKMLRQALAAVLGGSAADATDVLERAGVAATSRGEQLSIDDFVRIAQVAG
>NZ_CP054038.1|WP_172989447.1|1422506_1423439_+|phosphodiesterase
MRTAEYPAPERILLHISDTHLRAAGTARLFDAVDGAAYLERALSVIAASGIQPDAVVFTGDLADLGEPGAYAALRGLVEPFAAALGTRVFWVMGNHDDRAAFRAGLHDDLSGDMRPVDHVDELDGLRLITLDTTVPGEHHGELRDEQLEWLADVLATPAPLGTILAMHHPPVPSVLPLAASVELRDQPRLARVLRGTDVRAIIAGHLHYSTFATFAGIPVSVASSTCYAQDLTVPVGGTRPQDGAQAFNLVHLYDDTVVHSVVPVDAPRTLEYIDPAEARRRLRAAGIAGGGVSAPARRDAPTEPIALVR
>NZ_CP054038.1|WP_172989448.1|1423383_1425000_-|stealth-conserved-region-3-domain-containing-protein
MALTALPQPARPWTDLLSRPDVVLDRGILHLVHDDTTPHEARVRDLLLVADVLEGAGVPVILIRHTHTIPALVVDEVDRTRAHQALAAVCAEDPLYVKAKGVPPVLAADAPDFAAGPSRIKVYRPRVSRSGSLRYGAPLGAVVEFWRFGAHEEGVDAAAEAVAQAPGDNAVLRRITPVADLEHVRVERYGRSWSTFAGMFDPQPHEVIDEIDLVFSWVDGSSSEFQRQRAAQLAEYVVGEGDDGPARYRHVDELRYALRSVHMYAPWVRRIFIATDSPAPAWLLDHPKVTIVRSEEFFADPSVLPTHNSHAVEAQLHRIPGLAEHFLYSNDDMFFGRLTEPEMFFSSAGVTKFVECDVRIGAGTPQLHRSGHDNGLRVNRALLSERFGRTIARDLEHCATPLRRSVMAELEAAFPEDFARTAASRFRAATDISVTNSLYHYYALMTGRAVATREPRVRYVQTTMAAGLRRMERLAARSDVDMFCLNDGGNAEVPEDVRVTTLRATLERMFPIRAPWERDELSARERSARSAHPSGRAR
>NZ_CP054038.1|WP_172991542.1|1425180_1426227_+|aldo/keto-reductase
MSRGGDLHRPYAAADDRYELARYRRVGTSGLTLPPVSLGLWWNFGDNIPFDNQRALLRHAFDRGITHFDLANNYGPPYGSAETNFGRMMREDFAPYRDELILSSKAGYDMWHGPYGNGGARKYLLASAEQSLRRMSVDYVDIFYSHRVDPDVPVEETVAALDTLVRQGKALYVGISSYSAERTAVAAAVARSLGTPLVIHQPAYSILNRWVEDGLTGLLDQEGMGAIAFTPLAQGLLTDKYLGGGRADRAQKRSSMPDATLSEKGLATLRGLDVIAQERGQSLAQMAIQWVLRNPVVASALIGASRPAQLDENLAALDGPGFTTEELERIDALSDGIDVDLWAESATS
>NZ_CP054038.1|WP_172989449.1|1426223_1427156_+|4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol-kinase
MTAPLTAERVHVRAPGKLNLFFEVGPLADDGYHDVASAYQAVSLYEDVWAEPALEFTISVSGTVDVASVPEDDRNLALRAARLVAAEIGHPGGVHLEIVKHVPVAGGMGGGSADAAAALVACDALWGAELGMHRLQRLAARLGADVPFALLGGTAIGTGRGDELSPALAKGRFDWVILTSAEGLSTPEVYGHLDALRSRPDIRPAPRVPEVDPRVLQALRAADPGLLAEHMRNDLQAATLSLRPALREALEEGERSGALAGIVSGSGPTLAFLAGTPEGALDLQVQLSAAGYTALHVHGPVPGARVVRAA
>NZ_CP054038.1|WP_172991543.1|1427197_1428550_+|GNAT-family-N-acetyltransferase
MYDTVPAQAGFAALAAAWLDGTADPVSRDRLAAGGLDLRVEDRTDAQGYAAWLQVAARGFLDGERTQEQVDAAFERSGYRRRSAVYDPAAAMPEAPVATIASWIGGLTVPGGRAVPSCAVSAVTVSPTHRRRGIARALLEGELRAAAAAGVPLAMLTVSESTLYGRYGFAPAALSASWRIDTKRARWAGPQPEGRVDFVPRARLRELAPALHERVRLSRPGEIDVPAGHWDGMAGTLPGAKDPGRTRAIQYADAGGEVRGVALYSVHGNDDDFTKASVTIGYLLAETDDAYAALWRFFVEMDLVAQVRADEQSVDEPLRWMIDDQRAAVVTIADHQYVRVLDVPAALTARSYGAPGTLALQVEDPLGIAGGEFLIEVDAQGAAEVHAGTAGDARAGAVPVALGIAELSAMYLGGVSAIALAAAGRIRTPDPAAVARVFGWHQVPRLSIWY
>NZ_CP054038.1|WP_172989450.1|1428667_1429516_+|ATP-binding-cassette-domain-containing-protein
MIEFDQVSKTFPDGTRAVDEFDLVAPAHSTTVFVGSSGCGKTTLLRMINRMVEPTAGVIRIDGDDIAARDAVRLRRSIGYVMQNAGLLPHFTVVDNIATVPVLTGATRRAARARALELMDTVGLDHGMADRYPSQLSGGQQQRVGVARGLAADPNILLMDEPFGAVDPIVRAELQQELLRIQREVAKTIVFVTHDIDEAFLLGDQVVILEKGARVAQRGAPDEIIENPAGEFVATFIGADKGKRALGLKRTEHGTIVVDADGRAQGALVLDDADITEGAAGR
>NZ_CP054038.1|WP_172989451.1|1429512_1430196_+|ABC-transporter-permease-subunit
MSWVLNNLGLIGGLTLDHLRQSLIPIVLGLVLSIPLGWVAWRYRLVRSGIITLTGLLYTIPSIALLILLPTVFGYSALSETNLIVALTIYAVAILVRSVADGLDSVDPAVRQASTALGYGALRRFFAVDLPLAGPVILAGLRVTAASTVSLATVGILVGVINLGYLFTNGLQRRIIPEVLAGVLVVMLLALLIDLMLVGAGRLLMPWTRRVRAPRAARAAIAAEAAA

Crispr_ID: NZ_CP054038_8

• CRISPR_ID: NZ_CP054038_8
• CRISPR_location: 2851045-2851191
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_8

Consensus_repeat	Method
CCGTTCCGCTGTCGCAATGCGCACGTCTGGGCGCCGATTGCGAC	CRISPRCasFinder

spacers of NZ_CP054038_8

>8.1|2851089|59|NZ_CP054038|CRISPRCasFinder
CGCGGAGCAGCGGACCTCCCCGTTCCGGGGCGGACTACCCCGATCCGCAGTGGTCCTCT

CRISPR arrays and Neighbor proteins around NZ_CP054038_8

CRISPR arrays

The CRISPR arrays of NZ_CP054038_8

>merge|NZ_CP054038|8|2851045-2851191|CRISPRCasFinder
CCGTTCCGCTGTCGCAATGCGCACGTCTGGGCGCCGATTGCGACCGCGGAGCAGCGGACCTCCCCGTTCCGGGGCGGACTACCCCGATCCGCAGTGGTCCTCTCCGTTCCGCTGTCGCAATGCGCGCGTCTGGGCGCCGATTGCGAC

>NZ_CP054038|8|8|2851045-2851191|CRISPRCasFinder
CCGTTCCGCTGTCGCAATGCGCACGTCTGGGCGCCGATTGCGAC	CGCGGAGCAGCGGACCTCCCCGTTCCGGGGCGGACTACCCCGATCCGCAGTGGTCCTCT
CCGTTCCGCTGTCGCAATGCGCGCGTCTGGGCGCCGATTGCGAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172990611.1|2853086_2853668_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|380061
NZ_CP054038.1|WP_172990605.1|2846159_2847437_-|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|380566
NZ_CP054038.1|WP_172990614.1|2855911_2856391_-|nitroreductase-family-deazaflavin-dependent-oxidoreductase	unknown	unknown	gnl|CDD|211538
NZ_CP054038.1|WP_172990615.1|2856383_2857427_-|ATP-dependent-DNA-ligase	unknown	unknown	gnl|CDD|240135
NZ_CP054038.1|WP_172991660.1|2852076_2853057_-|NADPH:quinone-oxidoreductase-family-protein	unknown	unknown	gnl|CDD|176203
NZ_CP054038.1|WP_172990604.1|2844486_2846067_+|AMP-binding-protein	unknown	unknown	gnl|CDD|341259
NZ_CP054038.1|WP_172990606.1|2847448_2848576_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NZ_CP054038.1|WP_172990609.1|2850187_2850937_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213186
NZ_CP054038.1|WP_172990618.1|2861389_2862262_-|CHAD-domain-containing-protein	unknown	unknown	gnl|CDD|214880
NZ_CP054038.1|WP_172990608.1|2849450_2850191_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223487
NZ_CP054038.1|WP_172990616.1|2857624_2858779_-|SseB-family-protein	unknown	unknown	gnl|CDD|377787
NZ_CP054038.1|WP_172990613.1|2854591_2854798_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172990602.1|2842171_2843206_+|phosphotransferase-family-protein	unknown	unknown	gnl|CDD|270703
NZ_CP054038.1|WP_172990607.1|2848572_2849451_-|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119324
NZ_CP054038.1|WP_172990610.1|2851313_2852090_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|187600
NZ_CP054038.1|WP_172990601.1|2841627_2842071_+|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|223894
NZ_CP054038.1|WP_172990612.1|2853719_2854457_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|235975
NZ_CP054038.1|WP_172990617.1|2858851_2861344_-|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|273429
NZ_CP054038.1|WP_172990600.1|2840983_2841628_+|hypothetical-protein	unknown	unknown	gnl|CDD|376024
NZ_CP054038.1|WP_172990603.1|2843205_2844420_+|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl|CDD|173844

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172990611.1|2853086_2853668_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	6.32483e-21
NZ_CP054038.1|WP_172990605.1|2846159_2847437_-|ABC-transporter-substrate-binding-protein	gnl|CDD|380566	cd06343, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (ATPase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however its ligand specificity has not been determined experimentally.	2.1195e-124
NZ_CP054038.1|WP_172990614.1|2855911_2856391_-|nitroreductase-family-deazaflavin-dependent-oxidoreductase	gnl|CDD|211538	TIGR00026, Hypothetical_protein_Rv1261c/MT1299/Mb1292c., deazaflavin-dependent oxidoreductase, nitroreductase family. This model represents a family of proteins found in paralogous families in the genera Mycobacterium and Streptomyces. Seven members are in Mycobacterium tuberculosis. Member protein Rv3547 has been characterized as a deazaflavin-dependent nitroreductase. [Unknown function, Enzymes of unknown specificity].	4.78228e-10
NZ_CP054038.1|WP_172990615.1|2856383_2857427_-|ATP-dependent-DNA-ligase	gnl|CDD|240135	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2. The LigD Pol domain belongs to the archaeal/eukaryal primase (AEP) superfamily. In prokaryotes, LigD along with Ku is required for non-homologous end joining (NHEJ)-mediated repair of DNA double-strand breaks (DSB). NHEJ-mediated DNA DSB repair is error-prone. It has been suggested that LigD Pol contributes to NHEJ-mediated DNA DSB repair in vivo, by filling in short 5'-overhangs with ribonucleotides; the filled in termini would then be sealed by the associated LigD ligase domain, resulting in short stretches of RNA incorporated into the genomic DNA. The Pol domains of PaeLigD and Mycobacterium tuberculosis (Mt)LigD are stimulated by manganese, are error-prone, and prefer adding rNTPs to dNTPs in vitro; however PaeLigD and MtLigD belong to other subgroups, proteins in this subgroup await functional characterization.	1.83291e-104
NZ_CP054038.1|WP_172991660.1|2852076_2853057_-|NADPH:quinone-oxidoreductase-family-protein	gnl|CDD|176203	cd08241, QOR1, Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	8.39264e-130
NZ_CP054038.1|WP_172990604.1|2844486_2846067_+|AMP-binding-protein	gnl|CDD|341259	cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD. This subfamily of the AMP-forming adenylation family contains Escherichia coli FadD and similar prokaryotic fatty acid CoA synthetases. FadD was characterized as a long-chain fatty acid CoA synthetase. The gene fadD is regulated by the fatty acid regulatory protein FadR. Fatty acid CoA synthetase catalyzes the formation of fatty acyl-CoA in a two-step reaction: the formation of a fatty acyl-AMP molecule as an intermediate, followed by the formation of a fatty acyl-CoA. This is a required step before free fatty acids can participate in most catabolic and anabolic reactions.	0
NZ_CP054038.1|WP_172990606.1|2847448_2848576_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	2.30766e-50
NZ_CP054038.1|WP_172990609.1|2850187_2850937_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213186	cd03219, ABC_Mj1267_LivG_branched, ATP-binding cassette component of branched chain amino acids transport system. The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).	2.32941e-89
NZ_CP054038.1|WP_172990618.1|2861389_2862262_-|CHAD-domain-containing-protein	gnl|CDD|214880	smart00880, CHAD, The CHAD domain is an alpha-helical domain functionally associated with some members of the adenylate cyclase family. It has conserved histidines that may chelate metals.	1.17668e-14
NZ_CP054038.1|WP_172990608.1|2849450_2850191_-|ABC-transporter-ATP-binding-protein	gnl|CDD|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	5.10814e-102
NZ_CP054038.1|WP_172990616.1|2857624_2858779_-|SseB-family-protein	gnl|CDD|377787	pfam07179, SseB, SseB protein N-terminal domain. This family consists of several SseB proteins which appear to be found exclusively in Enterobacteria. SseB is known to enhance serine-sensitivity in Escherichia coli and is part of the Salmonella pathogenicity island 2 (SPI-2) translocon. This entry contains the presumed N-terminal domain of SseB.	1.37279e-05
NZ_CP054038.1|WP_172990602.1|2842171_2843206_+|phosphotransferase-family-protein	gnl|CDD|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	7.37397e-82
NZ_CP054038.1|WP_172990607.1|2848572_2849451_-|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119324	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins. LivH is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivH forms a heterodimer with another TM, LivM, to generate the transmembrane pore. LivM is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	6.92089e-53
NZ_CP054038.1|WP_172990610.1|2851313_2852090_-|SDR-family-oxidoreductase	gnl|CDD|187600	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs. This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	2.81378e-95
NZ_CP054038.1|WP_172990601.1|2841627_2842071_+|acyl-CoA-thioesterase	gnl|CDD|223894	COG0824, FcbC, Predicted thioesterase [General function prediction only].	3.8928e-31
NZ_CP054038.1|WP_172990612.1|2853719_2854457_-|SDR-family-oxidoreductase	gnl|CDD|235975	PRK07231, FabG-like, SDR family oxidoreductase.	1.85474e-92
NZ_CP054038.1|WP_172990617.1|2858851_2861344_-|UvrD-helicase-domain-containing-protein	gnl|CDD|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP054038.1|WP_172990600.1|2840983_2841628_+|hypothetical-protein	gnl|CDD|376024	pfam18598, TetR_C_36, Tetracyclin repressor-like, C-terminal domain. This is a C-terminal TetR regulatory domain found in QsdR proteins (quorum-sensing degradation regulation).	3.13185e-39
NZ_CP054038.1|WP_172990603.1|2843205_2844420_+|acyl-CoA-dehydrogenase-family-protein	gnl|CDD|173844	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2. FadE2-like Acyl-CoA dehydrogenase (ACAD). Acyl-CoA dehydrogenases (ACAD) catalyze the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of ACAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. The ACAD family includes the eukaryotic beta-oxidation, as well as amino acid catabolism enzymes. These enzymes share high sequence similarity, but differ in their substrate specificities. ACAD's are generally homotetramers and have an active site glutamate at a conserved position.	0

Protein sequences

>NZ_CP054038.1|WP_172990609.1|2850187_2850937_-|ATP-binding-cassette-domain-containing-protein
MNETTDPAERAEAATPPRLACRGLTVTFGGLTAVDDVSFAVAPGEVVALIGPNGAGKTSVFNAICGLVRRRGAVEIDGMPAPRRAAGLTSRGVARTLQGLGLFAGMTVRENVRVPVAGDGDADARVARQLAELDLAAFADAPAAALPYPDRKRVALARALVIRPTLLLLDEPAGGLGHDDIAALGRLIRAVAAEGCAVLLVEHHVDFVMGLADRIVVLDFGRVIARGTPDEVRVDPRVEEAYLGVKAAS
>NZ_CP054038.1|WP_172990608.1|2849450_2850191_-|ABC-transporter-ATP-binding-protein
MSARPATATGAALAFTAVTVGYGGAPVLHEVDFALEPGEIVALLGANGAGKTTLLRTLAGLVPAASGSILLDGADLAGVPTEARARQGIALVPDGRSVVAELTVEENLRLGALWSHRGAARDRAIGEVYEMFEPLARRRGAAGHQLSGGERQMLALGRALIARPRVLALDEPSLGLAPIVVGQLMGTLRDVAAARGVTVLLAEQNVTSALSIADRGVVLDLGRVVAVAPAAQLATDDALRHAYLGF
>NZ_CP054038.1|WP_172990607.1|2848572_2849451_-|branched-chain-amino-acid-ABC-transporter-permease
MDRLLFLLATGLARGAIFALFALSLVLIWRAARIINFAQGAMALVATYVAFAVSGLTGSYVAGLAAGILAGAAIGAGIERGIMRFAPHSQPLAGVIVAIGLVMVLQSLLGILFGAQFRPMSTPFDDSPIVGGGVPLLSPYDLFVLVIALAVMGGLALLFTRTSLGLQLRAAAFAPEVSRLLGVRVPRMVTIGWMLSAAVAALAAILLVPTELGLNPHSTDVLFVYAFTVAVVGGLDSPAGAMLGGLIVGVAMTLVTGYLGATVAPIAVLVLLVAVLLVRPNGIFSMREARSA
>NZ_CP054038.1|WP_172990606.1|2847448_2848576_-|branched-chain-amino-acid-ABC-transporter-permease
MTRILPSLTGAPRTIVLGAVLTVLAVGGTFLLDPFRNFQLATIAATFCAAAGLTLLIGHSGQLSLGHAALMATGGYGYALAANALTAAGVEGVPRFAIGLAVAVAVAGAMGWMLGLAAARLRGPYLAGVTLALVIAVPAVTAVFSGVFRGDQGLQIPFDGVPGALRTLIALEQWQAWVAVAVAGVTVTTLCVLARGPLGLRMRAVRDDETAARLSGVRAGRVKVTAFTASSAAAGAGGAVLCFVTQSVSPGAYTLAFSLLLVVAVVVGGLGSIGGAAVGSALIVLLPWAITTAIDALGLPAEVEQRLSGNVPVLVFGALLIAVMLAWPGGLASIRRRRRTPAAPASLPPASEPEPPGGRSGTPASSPPVLQHTHP
>NZ_CP054038.1|WP_172990605.1|2846159_2847437_-|ABC-transporter-substrate-binding-protein
MSQHTPARRAAAMLGASALLVSLAACSTPTGEVADAPGVTDDTVTIGTHTPLTGPAAAGYSSISAAATAYFAYLNDQGGVHGRTIEYIVKDDGYNPATTQTVVRELVQEDEVFAVLNGLGTPTHTAVLDYLNQNEVPDLFVASGSTNWNEPEKYPFTFGFNADYVVEGAALAQYAADEHPGKAVCLLGQDDDFGDEMIEGAELALGAGGLTHVERYSVSNQDVTAQIGALQAAGCEITLLATINGFTALALGTAAQLGWFPMWFSSSSGADYPTLVGFLGEEVGPALLQGLVGTNYLPALGGDSDWVSLFQQINDEYNDGAPFDGNTIYGMSVAYLFAEALEAAGENPTRQSLMDAVTGGDLAGSGILPLSFSTDSHAAYTGVGITAVDGGVQDYVGPTYAVEGGEVVAVDAEPVALENEAVPAS
>NZ_CP054038.1|WP_172990604.1|2844486_2846067_+|AMP-binding-protein
MPHPHDPAIDGGGFATLSVASILAESARRHGDRPALHFAGTTTTYRELWDQARAYAGALAARGIGRGDRVAMLVPNVPDFARVYYAALALGAVVVPVHLLLKSDEIAYVLRDSGADLVVVAAPLLAEAAPAAAEAGVALVTVLVPADAGAGLPRLEAEAADAVPIARHAPTHPIDPATILYTSGTTGTPKGAVGTHLSIVEQVHCNLIDGFDLRADDVVFGGLPLFHTFGQTAVMNIAFRVGAAVILLPRFDADDALALMVAHRATVFTAVPTMYVGMLEAARRSADRPPLRYAVSGGAALPVAVLEAFRDAFGADVHEGYGLTETAPTVSSNPLFEPIRPGTVGRPLWGVEVAIADPEIDDRVVLLEDAHALGEIVVRGHNLFKGYLGRPEASADAVVDEWFRTGDLGTFADGILSIVDRKKDMIVRAGYNVYPTEVEATMARHPGIAVAAVFGVDDPVKGQEVHAAVVAHEGVSLDPDEVIAFTRDRIAAYKYPRVVHVMPALPLGPSGKVLKRALVAQHTPVG
>NZ_CP054038.1|WP_172990603.1|2843205_2844420_+|acyl-CoA-dehydrogenase-family-protein
MDFAHDETTRELSERLRAFVHEHAIPAEQVLDAQLAAEPDRWGGFPVVAELQQRARAEGLWNLFLPGDPAETGAAGLTNLQYAPLAEITGWSPRLAPPAVNCAAPDTGNMEVLNEFGTPAQKERWLEPLLRAEIRSSFCMTEPDVASSDATNIGTRIRREGDEYVITGRKWWSTGAMNPDAAIFIVMGKTDPDAERHRQQSMILVPRDAPGVRVIRPLTVFGYDDRDHGGHAEIAFDDVRVPASHLIAGEGDGFAIAQARLGPGRIHHCMRALGMGERALSLVRERASARHAFGRTLAEQGVVREWAAEARIQLEALRLLVLKTAWLMDTVGNRRAMTEIQAIKIAVPRAVQQIIDRAIQVHGGAGVSGDTPLAELYAGIRSLRIADGPDEVHLSSLGRAELRV
>NZ_CP054038.1|WP_172990602.1|2842171_2843206_+|phosphotransferase-family-protein
MTDVPGLDAAGLTAWLTRAHPSLADRPLTASVIAGGRSNLTYAVDGATVPLVVRRPPLGHVLSSAHDMRREHRVISALAPTPVPVPVAIDVVDDEAAAEVTGTVFFVMERAPGSVLAHASQNAAYSPAALRRLSLQLVRHLADLHAVDPDAVGLADFGRPDGYLTRQLSTWRRQLDASRSRETPTLDALAGTLDADIPVSARTAIVHGDYRLDNALVSGTPDDPLISAILDWEMATLGDPLVDLGIFALYWDIAALGEAGGAVPSAVDPDAGYPSFDELVDAYAQRAGISVPDLRWYRAFAAFKLAVILEGIHYRFRAGDTVGAGFDRMGALVEPLARRGMEVR
>NZ_CP054038.1|WP_172990601.1|2841627_2842071_+|acyl-CoA-thioesterase
MAAHLARRPFATRWNDNDQYGHVNNTVYYAAMDTAVNAFMIAEGGLDPQGEAIALCAASSCEFHASASFPEPLEVGIGVERAGRTSITWALEILRPGDDAPIATGRFVHVFVDAATRRPTPIPASIRAALGSAAAPAEQPAARPAED
>NZ_CP054038.1|WP_172990600.1|2840983_2841628_+|hypothetical-protein
MSTLTAAATIASVGVEAAPSWLSARLADGTHADAQRAFDAARALFIDGRRIDMSALAASLGVDRTSLFRWVGNRDALLSEVLWSLAIPTLVSAEHACDGRAGGERIAGILTHFVDDLNTAEYFRSFLRREPARALRLLTTKESPIQRRYVATADWLVRRDLGAEPLGGAIDPAGLAYLLVRVSESFTYADLISGDTPSAARARTAFRLLLRVDG
>NZ_CP054038.1|WP_172990610.1|2851313_2852090_-|SDR-family-oxidoreductase
MSAPEPARGGLDLAGRVALVTGGARGIGEAYVRALHTAGSRVVIADILDAEGAALAAELGDRVRCVHLDVTDENQWDAAVAASLDSFGSVDVLVNNAGIANAAPIEHLTTEKWNAAIAVNLTGTFFGCRAVVPAMKAQFTATGTGGSIINISSVEGMRGSRGVHAYTASKFGVRGLSQSLAVELGPFGIRVNSVHPGFIRTAMTDRIDPAHLDIPLGRPGEPGDVAGTIVFLASDASRFTTGAEFVVDGGMIAGIPHR
>NZ_CP054038.1|WP_172991660.1|2852076_2853057_-|NADPH:quinone-oxidoreductase-family-protein
MRAWRVTALGEPADALRLDEIAVPSSAPGEVLVRVRAVAANFPDVLLCRGQYQVRPELPFVPGIEFVGDVVALGEGVAGPAIGTRVVGSKIGVLSEYAAVLASDVWEAPAALDDAAASGLTVAYQTAWFGLHRRAALEAGEWMLVHAAAGGVGLAAVQLGAAAGARVIGVVGSASKAQVVRDAGAEVVIVRGETDIASAVKEATGGHGADVVFDPVGGAAFEASTKCIAFEGRIIVVGFAGGDIQTLPAGHVLVKNYSVLGLHWGLYPRVRPDLIERARAELARLAETGTIAPVVDHAVTFEEAPAALTALADGGTVGRVVVHVGA
>NZ_CP054038.1|WP_172990611.1|2853086_2853668_-|TetR/AcrR-family-transcriptional-regulator
MKDSHVADDVTRAAVELFATQGYATTSVQQIVEAAGVTKGAMYHYFESKDDLLFGIYDKLLSLQKARLDEITAAGGAVEDVLRAVCIDVIETSIEFLPEGTVFFRSMHMLSAPRRQEVTRRRREYHDEFAELIATGQRDGIWREDIPLAMLVAHFFSDVHYLSHWYSPEGPEDRSLVARQLTDLFLSSLRKPT
>NZ_CP054038.1|WP_172990612.1|2853719_2854457_-|SDR-family-oxidoreductase
MHRFDGTVTIVTGASRGIGFAIARRIVAEGGRVVITGRRQPALDEAVAELGAQVTAIAGNAADPEHRAAVLAHVRDEHGRLDHLVNNTGINPVYGPLAEVDTAAARKIIDVNVIAALEWTRDAVAAGLTRSVVNLASVAGLGASPGIGFYGISKAALINLTMQLAYELAPAIRVNAVAPAVVKTAFARALYEGHEAEASAAYPLQRLGEIDDVAGPVAFLLSDDAAWITGQTLPIDGGAGIRPFL
>NZ_CP054038.1|WP_172990613.1|2854591_2854798_+|hypothetical-protein
MYATIHAAEIMYRHEADALARDLEHLQHQRERHDVGGRPTGFAVVTEGFWSLLQHLARTAAGVPASAH
>NZ_CP054038.1|WP_172990614.1|2855911_2856391_-|nitroreductase-family-deazaflavin-dependent-oxidoreductase
MPERRTAAQWAADLLRTRWIVRAPIPLYRAGLGWLLGPRMVMIEHRGRVSGEPRFVVVEVVEREGNAIRVASGFGETSQWYRNLRANGVAFLSTGRARRVPASVRFLSEEEGRAVLARYALAHPQAWEQLSAAMAELAGEPDPRIPVLEFGPPEVSARS
>NZ_CP054038.1|WP_172990615.1|2856383_2857427_-|ATP-dependent-DNA-ligase
MASERITLTVPGPDGDREVGLSSPNRVLWPELGITKHELAEYLIAVSGPFRAANGDRPVSLERFPEGVDGERFYSKNPPKGAPGFIETVTVTYNSGRRHPQLVLTEPAAAVWAAQMNTVVFHPWASLTSNTDNPVELRIDLDPQPGTDFADAAAVAPALREVLAEAGLEAFAKTSGNRGIHVFCPIEPAHEFLDVRHAVIAAGRELERRMPDKVTMSWWKEERGQRIFIDFNQANRDRTMAGAYSPRALPGATVSTPLTWDELVDADPGAFTIRTVPQRLADTGDPWADLLAKPGRIDTLLEWWQRDLDDGLGELNFPPDFPKMPGEPPRVQPSRKNPENWPKDADA
>NZ_CP054038.1|WP_172990616.1|2857624_2858779_-|SseB-family-protein
MSIFSRGKRAHDETAEAPSTEPDAAVDGAAAEEPAAADLTAAAPGDDAAGDDAAGDGPTEAVAADAEPAEADAAAELDAGVLPEAADAASESIPHVGISVTTFGKPTPRPASEGGPSITRTPAPPTGPVPGLRDNVLVRNALAALPENPEPLQLLNVARQLLQGHLFLRVKGDARALIAEGKELPLAMATVGEKKYALAYSSGAALQASVQADSDTHTSAMGQPVLVVLRHVLSGPYEGLILDHASAPARAVLPRPMLEKMLETIDEKLTLKTLLANPRSPQSEADLVTALADAPLWVAVNRAEEGGPLGIAEGRSDDGSRYLELYTHPLEVVAGGRGDQPAPIQADRLRAALRKDEGLSGVVLDPRGPWMRLTRAQLEPFLAE
>NZ_CP054038.1|WP_172990617.1|2858851_2861344_-|UvrD-helicase-domain-containing-protein
MTDASAAAPRAASTPLIVGGDVGPRASAPGARAVRPDEDLLQGLNPPQRDAVVYRGQALLIVAGAGSGKTSVLTRRIASLLRTKDAWPSQILAITFTNKAAGEMRERVEQLIGDHARGMWISTFHSACVRILRREAENFGFTKNFTIYDSGDSRALIKRLVKEHEADAFGLTPAAAQSKISKLKNELADAESYARSANMTDPAERVFVELFADYQRALQKANAFDFDDLIAQTVYLFRAFPKVADTYRRRFRHILVDEYQDTNHAQYALIHELTRPPGADAEPFEAGGGMMIFAAAPEPQDAASLTVVGDSDQSIYAFRGADIRNITEFERDYPGAKVVLLEQNYRSTQNILSAANAVISHNFDRKDKKLWTDVGAGEKIIGFTGYSQHDEAQFVADEIDTLRRGGVDYAQMAVFYRTNSQSRALEEIFIRAAVPYKIMGGTKFYERAEIKDALAYLVAVSNPADEMAVRRILNRPRRGIGDVTETAIARYAAEEGISFRDALANASVLGVGPKIQAAIVQLDAVLAEATEKMIPASGELPPSTAVAEGLQLLLAKSGYMDALRASRDPQDEARLENLDELVAVTREFARNNPEGTVSDFLAEVALVSDADDLDDESGSVSLMTMHTAKGLEYDAVFVTGVEEDLIPHRISAGEPGGPQEERRLFYVGLTRARKRLYLSLAMTRAQFGEVSVAMPSRFLQEIPAELVHWRQSPGDVNSRGGMQSRALNARRPGGSGGFGGSGKRYGDDLVPLARREPGAGMEKFANRIPAKVRDNGDMELAPGDRIRHDDFGEGRVDNVTGEGAKRVAHVRFDSAGLKKLLIKIAPIEKL
>NZ_CP054038.1|WP_172990618.1|2861389_2862262_-|CHAD-domain-containing-protein
MPHPAPLADLLIPALRTAAAEVADTERAALADEPDGVHQHRVRVRRLRSLLGGVSAHLDAAAVARLRVGYQEWGRQLGAVRDIEVLADLAAEVLDAHGNVDLDMRRRLVDDPRAERAVAHARLVELAQAARAAHRTALLETFAAHPPIVEGEGDAAPAVRAIMRAEARRVRRAAARRDGSAASLHTLRKAGRRLRYVAEGVSGADPSLFPAQLQTFADAGNGIHDALGDHRDRDALAERLDRTAPLAGRAGEEVSAYRELAAELRREAEERLAGIDDLVAAVRAAARTLR

Crispr_ID: NZ_CP054038_9

• CRISPR_ID: NZ_CP054038_9
• CRISPR_location: 3539124-3539234
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_9

Consensus_repeat	Method
CCCCGACCCCACGACCGCGCCAGGTTCCGGCATCCGCGCCA	CRISPRCasFinder

spacers of NZ_CP054038_9

>9.1|3539165|29|NZ_CP054038|CRISPRCasFinder
CATCGCGGCATCCGCGCCACATCGCGGCG

CRISPR arrays and Neighbor proteins around NZ_CP054038_9

CRISPR arrays

The CRISPR arrays of NZ_CP054038_9

>merge|NZ_CP054038|9|3539124-3539234|CRISPRCasFinder
CCCCGACCCCACGACCGCGCCAGGTTCCGGCATCCGCGCCACATCGCGGCATCCGCGCCACATCGCGGCGCCCCGACCCCACGACCGCGCCAGGTTGCGGCATCCGCGCCA

>NZ_CP054038|9|9|3539124-3539234|CRISPRCasFinder
CCCCGACCCCACGACCGCGCCAGGTTCCGGCATCCGCGCCA	CATCGCGGCATCCGCGCCACATCGCGGCG
CCCCGACCCCACGACCGCGCCAGGTTGCGGCATCCGCGCCA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991102.1|3539289_3543054_-|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|143443
NZ_CP054038.1|WP_172991099.1|3536392_3537421_-|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|176228
NZ_CP054038.1|WP_172991110.1|3548903_3550577_-|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl|CDD|237057
NZ_CP054038.1|WP_172991108.1|3546726_3547404_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225107
NZ_CP054038.1|WP_172991716.1|3537637_3538072_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991100.1|3537422_3537638_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224393
NZ_CP054038.1|WP_172991098.1|3535051_3535930_-|N-dimethylarginine-dimethylaminohydrolase	unknown	unknown	gnl|CDD|224747
NZ_CP054038.1|WP_172991109.1|3547391_3548654_-|sensor-domain-containing-protein	unknown	unknown	gnl|CDD|226951
NZ_CP054038.1|WP_172991104.1|3543794_3544355_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|372545
NZ_CP054038.1|WP_172991093.1|3527574_3528585_+|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl|CDD|224525
NZ_CP054038.1|WP_172991094.1|3528637_3529483_-|transglutaminase-family-protein	unknown	unknown	gnl|CDD|224224
NZ_CP054038.1|WP_172991106.1|3545030_3545837_+|coenzyme-F420-0:L-glutamate-ligase	unknown	unknown	gnl|CDD|183957
NZ_CP054038.1|WP_172991103.1|3543079_3543667_-|hypothetical-protein	unknown	unknown	gnl|CDD|237171
NZ_CP054038.1|WP_172991097.1|3533813_3535040_-|ornithine--oxo-acid-transaminase	unknown	unknown	gnl|CDD|179736
NZ_CP054038.1|WP_172991107.1|3545848_3546730_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991101.1|3538248_3539094_+|PIG-L-family-deacetylase	unknown	unknown	gnl|CDD|376836
NZ_CP054038.1|WP_172991096.1|3530392_3532102_-|circularly-permuted-type-2-ATP-grasp-protein	unknown	unknown	gnl|CDD|225190
NZ_CP054038.1|WP_172991095.1|3529479_3530412_-|alpha-E-domain-containing-protein	unknown	unknown	gnl|CDD|377234
NZ_CP054038.1|WP_172991111.1|3550582_3551554_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl|CDD|224936
NZ_CP054038.1|WP_172991105.1|3544521_3545028_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991102.1|3539289_3543054_-|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase	gnl|CDD|143443	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.	0
NZ_CP054038.1|WP_172991099.1|3536392_3537421_-|NAD(P)-dependent-alcohol-dehydrogenase	gnl|CDD|176228	cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.77681e-89
NZ_CP054038.1|WP_172991110.1|3548903_3550577_-|cytochrome-b/b6-domain-containing-protein	gnl|CDD|237057	PRK12323, PRK12323, DNA polymerase III subunit gamma/tau.	2.14374e-18
NZ_CP054038.1|WP_172991108.1|3546726_3547404_-|response-regulator-transcription-factor	gnl|CDD|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	7.93707e-40
NZ_CP054038.1|WP_172991105.1|3544521_3545028_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.2788e-11
NZ_CP054038.1|WP_172991100.1|3537422_3537638_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|224393	COG1476, COG1476, Predicted transcriptional regulators [Transcription].	3.42235e-25
NZ_CP054038.1|WP_172991098.1|3535051_3535930_-|N-dimethylarginine-dimethylaminohydrolase	gnl|CDD|224747	COG1834, COG1834, N-Dimethylarginine dimethylaminohydrolase [Amino acid transport and metabolism].	4.9112e-73
NZ_CP054038.1|WP_172991109.1|3547391_3548654_-|sensor-domain-containing-protein	gnl|CDD|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.18839e-40
NZ_CP054038.1|WP_172991104.1|3543794_3544355_-|acyl-CoA-thioesterase	gnl|CDD|372545	pfam13279, 4HBT_2, Thioesterase-like superfamily. This family contains a wide variety of enzymes, principally thioesterases. These enzymes are part of the Hotdog fold superfamily.	1.26961e-20
NZ_CP054038.1|WP_172991095.1|3529479_3530412_-|alpha-E-domain-containing-protein	gnl|CDD|377234	pfam04168, Alpha-E, A predicted alpha-helical domain with a conserved ER motif. An uncharacterized alpha helical domain containing a highly conserved ER motif and typically found as a tandem duplication. Contextual analysis suggests that it functions in a distinct peptide synthesis/modification system comprising of a transglutaminase, a peptidase of the NTN-hydrolase superfamily, an active and inactive circularly permuted ATP-grasp domains and a transglutaminase fused N-terminal to a circularly permuted COOH-NH2 ligase domain.	4.15342e-99
NZ_CP054038.1|WP_172991094.1|3528637_3529483_-|transglutaminase-family-protein	gnl|CDD|224224	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism].	5.46485e-37
NZ_CP054038.1|WP_172991106.1|3545030_3545837_+|coenzyme-F420-0:L-glutamate-ligase	gnl|CDD|183957	PRK13294, PRK13294, F420-0--gamma-glutamyl ligase; Provisional.	2.51489e-88
NZ_CP054038.1|WP_172991097.1|3533813_3535040_-|ornithine--oxo-acid-transaminase	gnl|CDD|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_CP054038.1|WP_172991101.1|3538248_3539094_+|PIG-L-family-deacetylase	gnl|CDD|376836	pfam02585, PIG-L, GlcNAc-PI de-N-acetylase. Members of this family are related to PIG-L an N-acetylglucosaminylphosphatidylinositol de-N-acetylase (EC:3.5.1.89) that catalyzes the second step in GPI biosynthesis.	7.11215e-23
NZ_CP054038.1|WP_172991096.1|3530392_3532102_-|circularly-permuted-type-2-ATP-grasp-protein	gnl|CDD|225190	COG2308, COG2308, Uncharacterized conserved protein [Function unknown].	0
NZ_CP054038.1|WP_172991103.1|3543079_3543667_-|hypothetical-protein	gnl|CDD|237171	PRK12678, PRK12678, transcription termination factor Rho; Provisional.	6.60087e-06
NZ_CP054038.1|WP_172991111.1|3550582_3551554_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl|CDD|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.41164e-84
NZ_CP054038.1|WP_172991093.1|3527574_3528585_+|LacI-family-DNA-binding-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.58163e-102

Protein sequences

>NZ_CP054038.1|WP_172991101.1|3538248_3539094_+|PIG-L-family-deacetylase
MRKRWIALIVVASVLLVAVAGAYWAGRSLFHMPTARGVDSIVGELDGERVLGVFAHPDDEQTVNGLFWRAKNDDGAYTAMITATKGEAGHQVPVVARQSDLGIVREAEALKNSYHLGVDEHEVWDFPDGGVPEADEQELVDRVVDVMQRVEPDVVVAFWPASGATGHKDHREMGRITELAIAQVAAAGGSYAGPEHLVYTISPTTALELFGGEAGAFVTANQPDPEYAMSAETGKKLDGWKIHASQENYLQAAYYLPAWLVYLLWDQEFYHVRDLTADPLG
>NZ_CP054038.1|WP_172991716.1|3537637_3538072_-|hypothetical-protein
MVYEERNIWAGLIVSTIGMVVYTVIVLPQAAGGSVEDVDWVPIMLWTIGLSIAASIVVSILWGIFAGMRDPDGVGRSDQRDGDIAAMSSRVGQAFLVIAGLGVIVECAFQADWFWIANTMFYGFAASSIIGGTASVIAYRRGLV
>NZ_CP054038.1|WP_172991100.1|3537422_3537638_-|helix-turn-helix-transcriptional-regulator
MVKPTRVTNSLRAVREEVGITQAELARQVGVTRQTLIAIEQGKYSPTLELAFQLARAFGVGLDDLFQYPED
>NZ_CP054038.1|WP_172991099.1|3536392_3537421_-|NAD(P)-dependent-alcohol-dehydrogenase
MTTHDEKTVDAEPGLPATMTAWRQSAYGGPETMSAARVEVPQPGRGEVLLRVRATALAAGDVKLMRGEPLVARVAFGLRRPKNPVRGIEVAGTVVGLGPEVAGLAVGDEVLGEVGLGGGLAEYAVSPAARLVRRPPGLDPVVAATLPVSAVTAWQALERVGVTDGDRVLVLRATGGVGTFAVQLARLRGAEVHATCGAANDELVRSLGASRTFDYRKVDAAALPAGAYDVVVDIAGTAPLGVLLGLVREGGRVVLVSGEGDRFWGPLGRIAGAAVRGIGSKRTLTALAASADTAVLERLVALADNGSLAPVIERTWPLAEAGAALAHVDSGRSAGKVVVTVS
>NZ_CP054038.1|WP_172991098.1|3535051_3535930_-|N-dimethylarginine-dimethylaminohydrolase
MSTQNTAPATEPTVASTRIQQHRSYLMCRPEHFTVSYTINPWMHPSNPTDTAKAVAQWQKLHDTYIALGHDVHLIDPIPGLPDMVYTANGGFLIDGVAYGAKFRFAERQPEGPAFMDWFRDNGFRVADPVETNEGEGDFLLVGDAILAGTGFRSTGDSHRELAEVFGKEVVSLNLVDPRFYHLDTAISVLDPVQGPGGVERANIAYLEHAFDERSQAILAERYPDAIRVSDEDGAVFGLNSSSDGLNVIISPRARGFEAQLRERGYNPVLVDLSELLLGGGGIKCCTLELRR
>NZ_CP054038.1|WP_172991097.1|3533813_3535040_-|ornithine--oxo-acid-transaminase
MTSAPQNLATAAIRIIDSEDAHVARNYAPLPVVISRGEGAWVTDVEGKRYLDLLSAYSALNFGHRHPAIVAAAQEQLGRLTLTSRAYHNDQLGRFARALAELCGKDLVLPMNTGAEAVETGIKVARAWGYRVKGVAQDAAHVVVAHGNFHGRTTTIVGFSDDPVARDDFGPFAPGFSAVPFGDAAAIEAAITPDTVAVLIEPIQGEAGVVIPPVGYLAAVREICTRHGVLMIADEIQSGLGRVGTTFACDREDVVPDVYLLGKALGGGILPLSAVVADADVLGVIRPGEHGSTFGGNPLASAVGLRVVEMLATGEVQTRAAALGEHLEARLETLIGHGVTAVRVAGLWAGVDIDPAAGTGREIAERMLARGVLVKDTHGQTIRIAPPLVVRATELDWAIEQLKLVLAG
>NZ_CP054038.1|WP_172991096.1|3530392_3532102_-|circularly-permuted-type-2-ATP-grasp-protein
MGDLFDGYGNTRSPRKTVSGVPAFDEMFSAAQVPGSPGTSREAYRELYQALAQMTQEELRGRTDSLASSYLAQGVTFDFAGEERPFPLDAVPRVITYDEWSRVEAGVKQRVQALEAFLDDAYGHQHCVRDDVLPARLIASSQYFYRQAAGIHSANGVRIQVAGIDLIRDEHGEMRVLEDNVRVPSGVSYVISNRRVMAQTLPELFVSMRVRPVGDYPNKLLAALRASAPPGVEEPNVVVLTPGVYNSAYFEHTLLARLMGVELVEGRDLLCIGGKVFMRTTRGPKRVDVIYRRVDDDFLDPLQFRADSMLGAPGLMLAARLGNVTIANAVGNGVADDKLLYTYVPDLIRYYLAEEPILKNVDTWRLEDPNALEEVLDRLDELVVKPVDGSGGKGLVVGPDASPAELDALRKRLLADPRGWIAQPVVMLSTIPTLVEDGMRPRHADLRPFAVNDGEDVWVLPGGLTRVALPEGQLVVNSSQGGGSKDTWIVGGSAPGHVEYGQGQGMAGLVADQAAITAAIPIIYDEVADEPPHSPHDRPRSRVEQQEQQQQGRDATPSAEEVSDALADR
>NZ_CP054038.1|WP_172991095.1|3529479_3530412_-|alpha-E-domain-containing-protein
MLSRIAESLFWIGRYVERSDGTARILDVHLQLLLEDPWIDEDTACRSLLSVMGSFPPEGLEVVRREDVLQRLAVDRMNPSSIAYALTAARENARRAREIVSTELWETLNTTSARMPRRLQTDKVHEFFQWVRERAALSVGVVDSSTNRDEAWQFFTLGRCIERADMTARLLATRSLTEASGPSWTTILRSCGAYEGYLRTYRGMPSARNAAEFLLLDRLFPRSIIFSIQGAEQCMSAIDPRADRVGHSNTVLRALGQIRNDLEYRPISEILNELPLHMHRVQTVTREASEAIRQRFFPTQAEPSWIGEIS
>NZ_CP054038.1|WP_172991094.1|3528637_3529483_-|transglutaminase-family-protein
MKRLRIEHQTGFSYQGDVSASYNEARMLPGSTDSQFVLNSSLDIEPSTSVNQYVDYFGTRVAAFDVLSAHPALMITARSLVEVRPRPIEHREYTWADLERDAARSIETVEQLSQTKRTLPHADVADLARRIVAEHDHPGRAAHAIAAAVGDAVEYMHGITGVHSTAAEAWEARKGVCQDIAHITLGALREVGIPARYVSGYLHPRADAEVGEPVTGESHAWVEWFAGEWQGFDPTNNLEIGDRHVLVGRGRDYNDVPPLRGVYAGPHKSHLHVKVTITREA
>NZ_CP054038.1|WP_172991093.1|3527574_3528585_+|LacI-family-DNA-binding-transcriptional-regulator
MPASIRDVALRAGVSVGTVSNVLNRPDEVSADSVDRVSRAIEELGYVRNDAARKLRAGVSTTIGFVVLDGQNPFYTDVVRGAEDEATKHGIAILYGNTDEDHSRERMYIDLFEEQQVRGLLIAPYGDVTARLRRLRQRGIATVLVDRFSGDGAFSSVSVDNIMGGRLAVEHLIDGGRRRIAFVGGPFDLRQVTDRLAGARVAAENAGAPVEVEVVATEAMTVDEGVAAGARILARPRRDWPDALFAANDLLALGLLQSLVVDGRMLAPDQIAVIGFDDIPFAAAAAVPLSSIRQPSRMIGRTALRIVLEEASDPENIARQTVFQPELVVRESTRAR
>NZ_CP054038.1|WP_172991102.1|3539289_3543054_-|bifunctional-proline-dehydrogenase/L-glutamate-gamma-semialdehyde-dehydrogenase
MAGEEGAGARADETIALAKRWIQEAAQVESDPAAERLAGVLKDDDGLPFTIGFVDGVLRPESLTAAASRLRRVAPLVPEFLPWYLRAAVRAGGAVAPVLPTPVVPIARRVLREMVGHLIVDARPDRLGPALAKIRESGARLNLNLLGEAVLGDQEARRRLDGIHDLIRRSDVDYVSVKVSAIAGRIWPWAFDEVVEEVVARLLPLYLTAAGSGADTGATQTFINLDMEEYRDLDLTIAVFTRLLSDERLQDLEAGIVLQAYLPDALPALEQLTAWARERVDSGGARIKVRLVKGANLAMEHVDAALHGWSLATYDTKLDTDANYLRCLDLALRPESTAAVRVGVAGHNLFDIAHAWLLAGERGASGDVEFEMLLGMAQGQVAAVAREVGHVLLYVPVVAPEEFDVAISYLVRRLEENASSENFLSAAFDLADEPTLFARERDRFLASLARAADPSLATGPNRVQVRDAAPGAPGAQAAPAAPPSPAAGSMVDAGLTQVVLDIARSAKGEGRGDAGGRGIHSPDDPGETAPIVPSVEEQLFGGDAYVETAVFAPRESGTRASGAPGFANTADSDPALAPGRAWARGILGRIEGSTAGDAAIAAARIDDAEELERVVARVREAGARWGARPAAERAEALQSAARMLEQRRGLLIEVAASETGKVFAEADVEVSEAVDFANYYAATARELDRVSGAVFEPARLTVVTPPWNFPVAIPAGGVLAALAAGSGVVFKPAPQARRCAAVVAEALWEAGVPREVLALVDIDEGSLGQRLIAHPDVDRVILTGSWDTAALFRSWRPDLPLLAETSGKNAMIIAPTADLDLAVADLVKSAFGHAGQKCSAASLAILVGPVGRSRRFARQLVDAVASLQVAAPTDPRAEVGPVVEVPQGKLEWALTTLDEDEQWLLEPREVDAATGLAGRLWTPGVRVGVRAGSRFHREEFFGPVLGIMHASSLAQAIEMQNAVAYGLTAGLHTQSPDDLALWLDEVEAGNLYVNRGITGAIVQRQPFGGWKRSSVGPGAKVGGPNYLVGLGSWRPSAGGSGSPTLHLRGLDSRITQLIEAAQPSLDYEAFEWLRRGALSDAIAWNREFGQVRDVSRLGLERNLLRYRPLPVMVRATGDAAWQALLRVILAGLRTGSEMVLSLPVGIPGGVRRVLGEFGIPVFIETDDEWLVRMRGGADGAPRPGRVRLVGPAASTGVLHRALAEAIDGDPDVAVYDNEVTTAGRLELLPFLHEQSITITAHRFGNPDDWSAEVI
>NZ_CP054038.1|WP_172991103.1|3543079_3543667_-|hypothetical-protein
MDTTALIWIIVGLVVVAVIVVVTLVLTSKGRRRRRAEAQRERAEELRAQARESEIAAREREAEAAQVRADAASAAAAAEQARARAAQATAEAQRRADQVDEPLEAAASHRSEQEEALRKADEIDPDVVADGDGTRRATRRAAEDDAAAEPAAEPVVERRADADPAAEPVIERRADGDPQEPRVTERRGDGVDSRA
>NZ_CP054038.1|WP_172991104.1|3543794_3544355_-|acyl-CoA-thioesterase
MNVIWRTLLVILRARVLLRRHGTVPPLTVGRLRVRTLPTDIDLLGHMNNGRYGSLFDLGRFDLLIRTGMWDALTTRGWYAVVASSTITFRKSLELWQRFTIESRLLGHDDKSVYLMHRAVVDGEVYTEMIVRARFLKRAGGIVSHEELFAAVGRPDDLPDVEPWVHEWAAASALPSTKADAPSIWR
>NZ_CP054038.1|WP_172991105.1|3544521_3545028_+|GNAT-family-N-acetyltransferase
MEAETQTDIVVRPVRDVDAEALGRVHATCWHETYDHLISKAALEKVSPRRLAELWTHWAVQGPEFKMFAALADGEIIGFAGSGPARDRDAPRNRELYFIYLLDAHHGTGTGQKLFDAVVEADEPLYLWVADDNPRAHRFYSRNGFALDGASHTEPFLGETLTEVRFVR
>NZ_CP054038.1|WP_172991106.1|3545030_3545837_+|coenzyme-F420-0:L-glutamate-ligase
MLQVWALPGLPEVSAGDDLVAQILQGVDAARGAHGDDAALRDGDIVVVTSKIVSKAEGRMLRADDREDAITAETVRLVAARTGPSGHTTRIVQNRLGIVAAAAGVDASNTPNGTVLLLPEDPDASARALAAGLRSGTGARVGVLVTDTLGRAWREGQIDQAIGSAGVHVFEDLRGQTDAEGRELVVTMPCVADEIAAAADLVKGKAARLPVAVVRGRADLVGDLDLPGARTIVRALERDMFRRGADEAYADGYAEGRAAAVRDDTPSV
>NZ_CP054038.1|WP_172991107.1|3545848_3546730_-|hypothetical-protein
MNTTLTPPPLPPQAPPPSPPTPPASGPAPTPTGSSGAAKVVSILTIALGGVLLVGAAGSAVLSTVAAASVRTSSQAVAVGEAAILDADVAAGSLRVEFADVSQAELDVTRPWGWGEWTLETRGDTLVVASPEIDFAGGWWTGGAGDAVLRLPESFAGSDVDLTLSAGSIEVDGDFREVALGVSAGEARVSGSADALEVEVSAGGAVLDLADVRVADLQVSAGSIEGELTGDQPDALVLDVSAGSLRLTVPDGRYDVDAEVSAGDFDSRLDESPGAQSTVEASLSAGEIVLRSR
>NZ_CP054038.1|WP_172991108.1|3546726_3547404_-|response-regulator-transcription-factor
MRILICEDSALLRAGLVRLLEDAGHSIAAELPDATGLADAVEAERPDLCILDVRLPPTWTDEGIRAALELRASSPALPLLVLSQYVEERYASDLIAASEGALGYLLKDRVADVADFLEAIERIGSGATVLDPEVVAQLLGRRRRDERMQRLTAREASVLALIAEGRSNQAIAKTLHVSEGSVEKHITAVFQKLDLEQDESGNRRVLAALAHIEHGGTQPQQGTNR
>NZ_CP054038.1|WP_172991109.1|3547391_3548654_-|sensor-domain-containing-protein
MSTAPPVTASVNSPLRILGALAHMAALGVVGPVVFSVLITFLGLGVGLLPLLGVGLLFLLAFVYGIFALGWLEAARVDGLYGFGIPPHRLRRSGRPGFGGFLRTLWLQTIDPFAWRGFASAAIATVLGWIVLTLAGIVGSGVVLAFAPLFAAEGTVHLARTVVEVPVAWAVPVGILAALLAAAALVGLAVLHGVLSRAIMVPSREAQLAEAARTSSYQHAGAVRAADVERTRIERDLHDGVQPRLVSVGMTLGMAQQKIDTDPEAAKQLIGEAHTSTKAAITELRQLARGIHTSVLDDRGLDAALSALAARSVIPVGLDVRLDGRCTRETETAAYFAIAEALTNAAKHSRASEVRVLVRLRDTGVLWARVEDNGVGGAQVVPGGGLDGIRNRIAAAGGEARIDSPNGGPTTVEVSIPCAS
>NZ_CP054038.1|WP_172991110.1|3548903_3550577_-|cytochrome-b/b6-domain-containing-protein
MATYGSTVRRGLPRVAGGEPWPAAGEAPVEVAPPNGDAPTSAPVPVDAAPTAPAEAAPAAPAEVATAPAVAATAAVAAAATGVPRAVRRGLPRVPGGEPWPPASFSDAPAAAPAASPEPAAAVPAAVASAPAAASTPAPASTPAPASAPAPASAPAPAPAVDAVPLRRGLPRVSGGEPWPPAGFAPGAAITDEAAAPAAEAAPVAVAAEVAAPAAPAVPAKDYSTPLAFTRTVWPGAHARTRPAPAPEPQRIGPFTKGQWAGATIVLGAALLIAAGMAVAFVRWFLSLEFMQDFLATYPGEYHLPEGAPVGFPAWLGWQHFFNVFLMVLIIRSGLRIRSEKRPTAFWTPRNNPKGKISLTMWFHQALDVLWLVNGVVFIVLLFVSGQWMRIIPTSWEVIPNALSAALQYVSLDWPTENGWVNYNSLQQIAYFTTVFIAAPLAAITGVRMSGVWPKNAKGLNKAYPVEWARAVHFPVMLYFVLFIFVHVVLVFATGALRNLNHMYAAQGSVDPNAYADNWVGFWIFSVSILVIIAAWVAARPLVIAPIARLFGKVSGR
>NZ_CP054038.1|WP_172991111.1|3550582_3551554_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MTFAEDAILVLLDVTPSGTLAASAAGLLGAASTVGTPVALVVSDADGLAEAAAALGAGTVLVAAPGEGLVVPVADALAAAAALVRPDAVLASHSVEGREAAARFAARTRSALCVDAVGVVRDDEGVVAQHSVYGGAYNVSAAATFGAPVITVRQGSIDARAEAVATPVVEKLEVEASGRKAATVGAVEEAVVSSSRPELRGAAKVVSGGRGLGSGEKFELVDQLADALGAAVGASRAAVDAGYVPQSYQVGQTGVSVSPQLYVALGISGAIQHKAGMQTAKTIVAINKDGDAPIFEIADFGVVGDLFTVVPQLIAALEAKKKA

Crispr_ID: NZ_CP054038_10

• CRISPR_ID: NZ_CP054038_10
• CRISPR_location: 3819382-3819480
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP054038_10

Consensus_repeat	Method
TCGTGGGGCGGTTCGTGCGGCATCC	CRISPRCasFinder

spacers of NZ_CP054038_10

>10.1|3819407|49|NZ_CP054038|CRISPRCasFinder
CGGCACCTGTACCCACCGCAAGCGCCCCACGAAGGAATGCGGCGCGTGT

CRISPR arrays and Neighbor proteins around NZ_CP054038_10

CRISPR arrays

The CRISPR arrays of NZ_CP054038_10

>merge|NZ_CP054038|10|3819382-3819480|CRISPRCasFinder
TCGTGGGGCGGTTCGTGCGGCATCCCGGCACCTGTACCCACCGCAAGCGCCCCACGAAGGAATGCGGCGCGTGTTCGTGGGGCGGCTCGTGCGGCATCC

>NZ_CP054038|10|10|3819382-3819480|CRISPRCasFinder
TCGTGGGGCGGTTCGTGCGGCATCC	CGGCACCTGTACCCACCGCAAGCGCCCCACGAAGGAATGCGGCGCGTGT
TCGTGGGGCGGCTCGTGCGGCATCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991339.1|3822425_3824048_+|MFS-transporter	unknown	unknown	gnl|CDD|129794
NZ_CP054038.1|WP_172991737.1|3825540_3826362_-|TIGR03943-family-protein	unknown	unknown	gnl|CDD|274870
NZ_CP054038.1|WP_172991340.1|3826384_3827431_-|permease	unknown	unknown	gnl|CDD|223773
NZ_CP054038.1|WP_172991334.1|3818436_3819258_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|366166
NZ_CP054038.1|WP_172991330.1|3810168_3811437_-|beta-lactamase-family-protein	unknown	unknown	gnl|CDD|365903
NZ_CP054038.1|WP_172991733.1|3811532_3811844_+|DUF2470-domain-containing-protein	unknown	unknown	gnl|CDD|378456
NZ_CP054038.1|WP_172991338.1|3821659_3822352_-|DNA-3-methyladenine-glycosylase	unknown	unknown	gnl|CDD|376746
NZ_CP054038.1|WP_172991333.1|3817767_3818334_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP054038.1|WP_172991735.1|3815218_3817012_-|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein	unknown	unknown	gnl|CDD|378238
NZ_CP054038.1|WP_172991341.1|3827417_3827831_-|transcriptional-repressor	unknown	unknown	gnl|CDD|133478
NZ_CP054038.1|WP_172991734.1|3814174_3815182_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991332.1|3812614_3813988_-|AAA-family-ATPase	unknown	unknown	gnl|CDD|350795
NZ_CP054038.1|WP_172991335.1|3819549_3820623_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|369561
NZ_CP054038.1|WP_172991336.1|3820782_3821088_-|30S-ribosomal-protein-S14	unknown	unknown	gnl|CDD|181574
NZ_CP054038.1|WP_172991329.1|3809282_3810158_-|EamA-family-transporter	unknown	unknown	gnl|CDD|227339
NZ_CP054038.1|WP_172991331.1|3811911_3812565_+|biliverdin-producing-heme-oxygenase	unknown	unknown	gnl|CDD|350856
NZ_CP054038.1|WP_172991337.1|3821091_3821262_-|50S-ribosomal-protein-L33	unknown	unknown	gnl|CDD|179075
NZ_CP054038.1|WP_172991736.1|3824087_3825422_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_127819842.1|3817275_3817563_-|HU-family-DNA-binding-protein	unknown	unknown	gnl|CDD|259859
NZ_CP054038.1|WP_013584774.1|3821261_3821498_-|50S-ribosomal-protein-L28	unknown	unknown	gnl|CDD|234736

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991339.1|3822425_3824048_+|MFS-transporter	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.32561e-40
NZ_CP054038.1|WP_172991737.1|3825540_3826362_-|TIGR03943-family-protein	gnl|CDD|274870	TIGR03943, TIGR03943, TIGR03943 family protein. Members of this occur in gene pairs with members of pfam03773. The N-terminal region contains several predicted transmembrane helix regions while the few invariant residues (G, CxxD, and W) occur in the C-terminal region.	6.27381e-30
NZ_CP054038.1|WP_172991340.1|3826384_3827431_-|permease	gnl|CDD|223773	COG0701, COG0701, Predicted permeases [General function prediction only].	4.88538e-48
NZ_CP054038.1|WP_172991334.1|3818436_3819258_+|alpha/beta-fold-hydrolase	gnl|CDD|366166	pfam00561, Abhydrolase_1, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.56598e-13
NZ_CP054038.1|WP_172991335.1|3819549_3820623_-|alpha/beta-hydrolase	gnl|CDD|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.93513e-48
NZ_CP054038.1|WP_172991733.1|3811532_3811844_+|DUF2470-domain-containing-protein	gnl|CDD|378456	pfam10615, DUF2470, Protein of unknown function (DUF2470). This family is a putative haem-iron utilisation family, as many members are annotated as being pyridoxamine 5'-phosphate oxidase-related, FMN-binding; however this could not be confirmed.	5.21015e-13
NZ_CP054038.1|WP_172991338.1|3821659_3822352_-|DNA-3-methyladenine-glycosylase	gnl|CDD|376746	pfam02245, Pur_DNA_glyco, Methylpurine-DNA glycosylase (MPG). Methylpurine-DNA glycosylase is a base excision-repair protein. It is responsible for the hydrolysis of the deoxyribose N-glycosidic bond, excising 3-methyladenine and 3-methylguanine from damaged DNA.	1.77543e-66
NZ_CP054038.1|WP_172991333.1|3817767_3818334_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.8058e-10
NZ_CP054038.1|WP_172991735.1|3815218_3817012_-|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein	gnl|CDD|378238	pfam09678, Caa3_CtaG, Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as found in Bacillus subtilis.	1.37486e-80
NZ_CP054038.1|WP_172991341.1|3827417_3827831_-|transcriptional-repressor	gnl|CDD|133478	cd07153, Fur_like, Ferric uptake regulator(Fur) and related metalloregulatory proteins; typically iron-dependent, DNA-binding repressors and activators. Ferric uptake regulator (Fur) and related metalloregulatory proteins are iron-dependent, DNA-binding repressors and activators mainly involved in iron metabolism. A general model for Fur repression under iron-rich conditions is that activated Fur (a dimer having one Fe2+ coordinated per monomer) binds to specific DNA sequences (Fur boxes) in the promoter region of iron-responsive genes, hindering access of RNA polymerase, and repressing transcription. Positive regulation by Fur can be direct or indirect, as in the Fur repression of an anti-sense regulatory small RNA. Some members sense metal ions other than Fe2+. For example, the zinc uptake regulator (Zur) responds to Zn2+, the manganese uptake regulator (Mur) responds to Mn2+, and the nickel uptake regulator (Nur) responds to Ni2+. Other members sense signals other than metal ions. For example, PerR, a metal-dependent sensor of hydrogen peroxide. PerR regulates DNA-binding activity through metal-based protein oxidation, and co-ordinates Mn2+ or Fe2+ at its regulatory site. Fur family proteins contain an N-terminal winged-helix DNA-binding domain followed by a dimerization domain; this CD spans both those domains.	9.11177e-36
NZ_CP054038.1|WP_172991332.1|3812614_3813988_-|AAA-family-ATPase	gnl|CDD|350795	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1. Pif1 and other members of this family are RecD-like helicases involved in maintaining genome stability through unwinding double-stranded DNAs (dsDNAs), DNA/RNA hybrids, and G quadruplex (G4) structures. The members of Pif1 helicase subfamily studied so far all appear to contribute to telomere maintenance. Pif1 is a member of the DEAD-like helicases superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	6.37731e-46
NZ_CP054038.1|WP_172991330.1|3810168_3811437_-|beta-lactamase-family-protein	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.90408e-28
NZ_CP054038.1|WP_172991336.1|3820782_3821088_-|30S-ribosomal-protein-S14	gnl|CDD|181574	PRK08881, rpsN, 30S ribosomal protein S14; Reviewed.	1.56116e-53
NZ_CP054038.1|WP_172991329.1|3809282_3810158_-|EamA-family-transporter	gnl|CDD|227339	COG5006, rhtA, Threonine/homoserine efflux transporter [Amino acid transport and metabolism].	1.2396e-63
NZ_CP054038.1|WP_172991331.1|3811911_3812565_+|biliverdin-producing-heme-oxygenase	gnl|CDD|350856	cd19165, HemeO, heme oxygenase in eukaryotes and some bacteria. This subfamily contains heme oxygenase (HO, EC 1.14.14.18) found in eukaryotes as well as some proteobacteria, including cyanobacteria. Heme oxygenase (HO) catalyzes the rate limiting step in the degradation of heme to biliverdin in a multi-step reaction. HO is essential for recycling of iron from heme which is used as a substrate and cofactor for its own degradation to biliverdin, iron, and carbon monoxide. In vertebrates, HO plays a role in heme homeostasis and oxidative stress response, and cellular signaling in mammals that include isoforms HO-1, HO-2 and HO-3. HO-1 is ubiquitously expressed after induction while HO-2 expression is constitutive, mostly limited to certain organs, such as the brain, testes, and the vascular system. HO-3 is non-functional in humans, suggesting that the Hmox3 gene is a pseudogene derived from HO-2 transcripts. In higher plants and cyanobacteria, heme oxygenase is required for the synthesis of light-harvesting pigments, which contain tetrapyrrols derived from biliverdin. Candida albicans expresses a heme oxygenase that is required for the utilization of heme as a nutritional iron source, whereas Saccharomyces cerevisiae responds to iron deprivation by increasing Hmx1p transcription, which is controlled by the major iron-dependent transcription factor, Aft1p, and promotes both the re-utilization of heme iron and the regulation of heme-dependent transcription during periods of iron scarcity. In pathogenic bacteria, HO is part of a pathway for iron acquisition from host heme. In Leptospira interrogans, a pathogenic spirochete that causes leptospirosis, HO is required for iron utilization when hemoglobin is the sole iron source, thus making HO an interesting target for novel antimicrobial agents. HO shares tertiary structure similarity to methane monooxygenase (EC 1.14.13.25), ribonucleotide reductase (EC 1.17.4.1) and thiaminase II (EC 3.5.99.2), but shares little sequence homology.	2.19753e-78
NZ_CP054038.1|WP_172991337.1|3821091_3821262_-|50S-ribosomal-protein-L33	gnl|CDD|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	1.73216e-21
NZ_CP054038.1|WP_127819842.1|3817275_3817563_-|HU-family-DNA-binding-protein	gnl|CDD|259859	cd14435, SPO1_TF1_like, Bacteriophage SPO1-encoded TF1 binds and bends DNA. This group contains proteins related to bacillus phage SPO1-encoded transcription factor 1 (TF1), a type II DNA-binding protein related to the DNA sequence specific (IHF) and non-specific (HU) domains. Type II DNA-binding proteins bind and bend DNA as dimers. Like IHF, TF1 binds DNA specifically and bends DNA sharply. Bacteriophage SPO1-encoded TF1 recognizes SPO1 phage DNA containing 5-(hydroxymethyl)-2'-deoxyuridine as opposed to thymine, Related family members includes integration host factor (IHF) and HU, also called type II DNA-binding proteins (DNABII), which are small dimeric proteins that specifically bind the DNA minor groove, inducing large bends in the DNA and serving as architectural factors in a variety of cellular processes such as recombination, initiation of replication/transcription and gene regulation. IHF binds DNA in a sequence specific manner while HU displays little or no sequence preference. IHF homologs are usually heterodimers, while HU homologs are typically homodimers (except HU heterodimers from E. coli and other enterobacteria). HU is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups).	1.73713e-31
NZ_CP054038.1|WP_013584774.1|3821261_3821498_-|50S-ribosomal-protein-L28	gnl|CDD|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.38281e-31

Protein sequences

>NZ_CP054038.1|WP_172991334.1|3818436_3819258_+|alpha/beta-fold-hydrolase
MDTTTKAPIVLIHGLWMTPKSWDTWAERFRAAGHDVIIPGWPGIGDRTVDEIRQNPEPLKGIGLTQIADYYEEIITALPQKPIIMGHSFGGVITQMLADRGLGIAYVGVEPGQTAGVTALPLSTLWTGTPILSNPFGKNGAKPLSKRHFHFTFGNDLPRSESDKLWKEYAVNSYNRVFFEGVTSVLNEKGGVTHVDYGRTDRAPLLILTGEIDHVVPPAIGKAIVKKYHASGSPAVVDYKEFPGRTHRIVSQDGWQEVADYALDWATSHALAA
>NZ_CP054038.1|WP_172991333.1|3817767_3818334_-|TetR/AcrR-family-transcriptional-regulator
MSQKNLSARDRLLDAATVLFYGEGIHSVGVDRIVQEAGVTRATMYKQFAGKEGLVLAYLAREDQQLRGLFADAARASDDPDVLLDLVIEGIAADIGGRHTRGCPFINAAAEYPDRGPVRELIDTHREWFRATLETLARGAGLHEPAEVAASLVLLRDAALVGGYLDGQERVAPAFARTARGVIASHRG
>NZ_CP054038.1|WP_127819842.1|3817275_3817563_-|HU-family-DNA-binding-protein
MADKSITKTELVASIASATGQSQAAVSGVLDSLFSTVSEAVAKGSKVSIPGWISFEQVATSARTGRNPQTGEEIKIPAGKRVKVTAGSKLKAAVK
>NZ_CP054038.1|WP_172991735.1|3815218_3817012_-|bifunctional-copper-resistance-protein-CopD/cytochrome-c-oxidase-assembly-protein
MVGVLVTALFTLRSGEREFDIALDAASISAAVFTVAAAATGFFTFIDAFNPAIDAGPEFGAQLARFLVDTEVGRTWLITTVAGAVLTVLTFAVRGWTTTLFVAILAVAALIPMGTQGHSGYDAGHDAAVVAIILHIIAAAVWVGGLLLLVLVRPVLAQPALATVVTRYSSIALVAFIVVAVSGTVRAAIGLGDWSALLSEYGVILMVKIAALGGLGLFGAWYRRRLIGGLTGEKASRSFWTLIAFEFALMGVASGAAAALARTPPPVDTSLPAERTPAQFLTDAPLPPELTPLHYLTAWDIDLLWAFAVGFGLLFYLAGVWRLRRRGDAWPVYRTVLWSLGLLLLLWVTGGVVNVYQDYLFSIHMVGHMLLTMAIPVMLVAGAPVTLAMRAIRKRDDGTRGGREWILWAVHSPVSRVLTNPFVAAGLFVGSLWVFYYTDLFRWSLYDHLGHEWMIAHFLITGYLFVLTLIGIDPVPYRLPYPGRLLLLIGVMAMHAFFGIAIMMQEGLMVAEWFGSMGRTWGATPLEDQYIGGGVAWSIGEIPTLVLAITVAIQWSRSDARDQKRQDRHADRTGDAELEAYNEHLAKLAERDARTRT
>NZ_CP054038.1|WP_172991734.1|3814174_3815182_+|hypothetical-protein
MIIGVLGAALVAALWAGGALLYQHFYSPTAFVERYLGMLSDRDAADALAVPGVAIDSADLADSSLPEQASDALLRRDALAALTDVEVVSEQIDGEVTLVTVDYRAGAYQGTTTFEVERDGWIGIAPTWRFARSPLAVIDLTVNGSMSFDVNGFEIDKRQVSPDGVDADPLEAVPLLVFSPGVYSISVDTAISATPGVAVLSDSPFHTIPVSVQATATEEFVEVVQERVVQFLESCASQQVLQPTACPFGYLVQDRIVAPPTWSISAHPAVTVEPAGAGWRIPPTEAVARIAVDIQSLFDGSITAVDEDVPFIVTADITVRPDGTASIVVTGPDTR
>NZ_CP054038.1|WP_172991332.1|3812614_3813988_-|AAA-family-ATPase
MTTPALSPEQEAVFRLIEDTREHVFVTGRAGTGKSTLLQHLAWNTSKQIAVCAPTGVAALNVEGQTIHSLFRLPIGLIAGGDLDQSDATRRILNAIDTLVIDEISMVNADLMDAIDRSLRQARGRRAEPFGGVQIVMFGDPYQLAPVPPRGDELRYIRDHYRSFWFFDAKVWVGEAASDGILDVGSYGAALHMRELVDIHRQSDPAFKSMLNAVRYGRVTADIAKVLNDTGARAVPDPADGEHPIITLATRNDIVNNINRRHLTELIGREQTAVAEVNGDFGRGDAAYPADMELKLKVGAQVMFLRNDSSQFGDPPRWVNGTIGTVTRIAGGTVRVDVDGEEVDVEPAVWERFRYAYDAGSKALTREIVAEFTQFPLRLAWAVTIHKSQGKTYDRAVIDLGSGAFAPGQTYVALSRLTSLDGLYLSRPLRPSDIRVDPDVQRWMRGVREGTATRTGP
>NZ_CP054038.1|WP_172991331.1|3811911_3812565_+|biliverdin-producing-heme-oxygenase
MSGVLPFSAALRERSSSAHSSSESAGFMSDLMTGEGTRDDYIALVAQHWFLYEALERTAGVMRNDPVASVFLSDKLTRLPALEADLEFLLGPDWRERIEPLPTTRRYVDRVNEVGATWAGGFVAHHYTRYLGDLSGGQFIGRVMARRFGFETNGIGFYLFDDIADPKAFKDVYREQLDAAPWDAAEQERVIAEVLLAYRFNTDLFHDLAHDKAARAA
>NZ_CP054038.1|WP_172991733.1|3811532_3811844_+|DUF2470-domain-containing-protein
MTHQFDATVVAAVLDHMNGDHADDNLLIARAFAPDATISAASMTAFDGDGGRWAATLADGTTREIAVAWPAAPITARPEVRREIVALYDEACRRLGVEPRPHA
>NZ_CP054038.1|WP_172991330.1|3810168_3811437_-|beta-lactamase-family-protein
MPMAARRRRVGAALAAAVVLAIGLAACSGPGVELDGPEQVDSALPEATVTELSAAVENAMTAAGASGAIIGVWAPWSGTWVSGFGTQRPGGGAEVTEDMTFRAARIGRPMTCDVLYRLVADGRVKLDAAVSDYVGGVADLGDVTLEQLCNSTSGIGAYQGQLQTLWLSNPERRWQPLELASYGLGQERKTEPGQAYRDSDAGYVLLGLALERATGKTAAELIEEYVAEPLALEATRLSNGSAQAGATVLAGAHSTRTDGVWNCTDPIDATPVSASTGFTDSGIVTDIDDLGRYAQALSEGVLMPEGTDRWDSVQPAYNGAPAWYTIGGGTVQAGALTGQFGAVPGYITAAFADDETGLTVAVVLNNSAAGGGFGAYLAWELAAIASKAPATGSEPAPAAGLPWTPEQYHDAITDGAICAPAE
>NZ_CP054038.1|WP_172991329.1|3809282_3810158_-|EamA-family-transporter
MSLRVAPSSAVALVVVGLACQEVGASLAVLLFPQVGPLGMVLLRLVFSALILLAIARPSLRGHSASAWRGVLWFGGVLALMNGLFYLALERLPLGVTVTIEVLGPLVLSIVASRRASAWLWALLALAGVVALGGGGWDRLDPLGVLFALGAAASWAFYILASARVGRDFAKFDGLALAMTAGALVALPFGIVDAGPALLRWELVALGAAVAVLSSTIPYALELMALRRLPAAAFAILMSLAPATAAVAGFVLLGQHLSWLEIVGIGLVIAASIGAVRSSARAAREAAEPVA
>NZ_CP054038.1|WP_172991335.1|3819549_3820623_-|alpha/beta-hydrolase
MPLDPFFEERLRVHRRYLLGKAVKTLRRRLAALWPRWGGEDRAMDAAPGRAAASTSPGPRARARAKNRRAALAWDRTELATVGMPGPDVPIEEHRVAVPGRPDVRVRLYRPRDAASPVPAVLTFFGGAFRIGGIDYPTTDAAFRRRAADAGVVVAAVDYALAPEHRYPTQVEQGVAALGWLFAHAAELGVDATRIGIAGVSAGANLAAAVTLVNRDGAGHPLRMQLLEVPVVDLTGGHLDFRVTRALGIPTLIAVRELRSVARTYLPHARQAREPLASPLRAASHADLPPAVILTAEYDLLRGDGAAYGHALRRAGVEASTVQYLGVTHDTAIFGGVLPAARRWHADVVTALRRLHA
>NZ_CP054038.1|WP_172991336.1|3820782_3821088_-|30S-ribosomal-protein-S14
MAKKSKIARNKQRQEVVDRYAAKRAELKKALIDPNSTDEQREAARVGLQKLPRNASPVRLRSRDVIDGRPRGVLTKFGISRVRFRDMAHRGELPGVTKSSW
>NZ_CP054038.1|WP_172991337.1|3821091_3821262_-|50S-ribosomal-protein-L33
MAKKAQDVRPIIKLRSTAGTGFTYVTRKNRRNNPDRIVLKKYDPVIRKHVEFREER
>NZ_CP054038.1|WP_013584774.1|3821261_3821498_-|50S-ribosomal-protein-L28
MAAVCQVTGAVPGFGHNISHSHRRTKRRFDPNVQKKTYFVPSLGRNIKLNVSAKGIKVIDARGIEAVVRDLQAKGVKL
>NZ_CP054038.1|WP_172991338.1|3821659_3822352_-|DNA-3-methyladenine-glycosylase
MAEIALRPVTRDELRGLPADIAPRLLGAHLTTVVDGESVTVRLTEVEAYHGRGTGDRPDPGSHARMGPTPRNATMWGEPGHLYVYLSHGIHSCVNVVCGPVGEAGGILMRAAEVIEGEDAATRRRPAARTLRDLARGPGRLGRAVGLRHPDHDGIDAVTGEPRAGASARLLVRAAPLAEIAAGPRVGVAGVGGTEAFPWRFWIAGDPTVSAFRWGRGAAAVKGDAPSVLD
>NZ_CP054038.1|WP_172991339.1|3822425_3824048_+|MFS-transporter
MARWFVLIVLGVSQFVMVLDSTVMNVSISTVASDLGTDISGMQAAITLYALTMAAFMLTGGKLGDKWGRSRAFRIGSVIYGLGSLTTALAPNLPVLLVGWSLVEGLGAVLVIPAIAALAAINYSGRDRVVAFAALGAITGLAAAAGPLIGGLVTTYASWRYVFVGEAIVIVIVLVVSGRIKDVPAEKSLRIDLLSVLLSVLGMTLLVFGILQSKTWGWIVPLDPPVIGDVTVAPLGISPVAYLVLLGIVVLWLFIRRQHRLERLGRPALLRVSLLRITALRSGLTMFMAQYFAIAALFFVVPVYLQTILGFDALQTGLKILPLSLGLIAFSMLGSRLSTVKSARYLGRIGQLTMAGGLFLVFAAVQPDLAGWLFAAGMFVVGAGFGLLASQLGNVNMSAVTKDDTSEVGGLQGTFQNLGSSFGTAIVGSVFILLLTTGFTATVAESEQLTDEVRAGVVAATETGAPIISQQQAQDALTAAGAGPDEAAAIAQLYADAQLESLRQALFIVFAITVVGLMLARGLPTSIPVPPKDEAAARSE
>NZ_CP054038.1|WP_172991736.1|3824087_3825422_-|hypothetical-protein
MVVAVLAVVGLVGAAASVALGPRVTEVSVDPDAAVAASGSRLIVTTSQSLAEVTAEQVTVTPETPFAVDTSGRSVGVRFGTPLRDETEYTVTFSGLTGVGGGPAVEITETFRTPAIEVHLLQRGGDEDTIFRTDLGGEQAQPVFRHPHIEDFRATASHLVISVRTDDDRAALIVTDLDGGDERELPLPGNGFVSNLQAADRGETIGYTFSDADLGAEGGRESMLYTASVAPGAADAEPTAVAVEGVDPRVDQWRFVPETDSILVLTFDSTLLLAGATGEGATTLGNAVSIEGIAGTDAIVERVDGIIVIDLTDASEAPLVEADAELGRLDAALPVPGGGTLRTYAQLDADGFPVGSRIAFVDDDGRSQVVADVDPADAVLQNCVSPSGRYAATLIAPDAVTNRYDQYLLPMPETVETRLAELDDATALVALSGFDISWCRVPPS
>NZ_CP054038.1|WP_172991737.1|3825540_3826362_-|TIGR03943-family-protein
MRESLVTRWLGVGLAAILAVVTVSLALTGQLGLYINPDSTWFAVSMSVVVLIGAIASFALPLGAEADHGHDHGDGHDSGHDHGDGHAHAHGAAQHEVPEPTHAHRPSPLGVAATVTGGVAASGIVLLTLVLPPATLSAELAMSRDTGAAPLFAGSDVVNLAATGDTSAFGVGEWSAVFATATNPEAFDGDPVELTGFVTPGERGDFALTRLVITHCVIDAQPASVPIVDDGGVPSTGQWITVSGTVRSTSDGRLAIVADTVDEIDEPEDPYEF
>NZ_CP054038.1|WP_172991340.1|3826384_3827431_-|permease
MSRPDPGTARYTPRTARPDPRPAARLAAAVGIGAVVVAALFLIDAFAPTLFPASLPTRAQDGLTLAISVLIESLPFVALGVVLSIVVQVWVPPGVIERWMPRTPWLRRAVLSLLGMFIPVCECGNVPFARGLLMRGFSVPETLTFLIAAPIVNPIVIITTHQAFGFDDGILIARLLGGYAIANLIGWLYSRHPSPDTLLTERFRDTCALVTHEPGSRWRRTMAQFVIELRAVMPALIIGSALAGAVQVLVPRETLLAIGSNPALSIVAMIALAMVVSICSNVDSFFALSFASTFTPGSIVAFLLVGPLVDVKMLALLRTTFTTRTLAGIVVVVVLAAFAIGTAVNLLV
>NZ_CP054038.1|WP_172991341.1|3827417_3827831_-|transcriptional-repressor
MAQRNTWQRERVREALADARGFVSAQTLHATLRDENTGIGLATVYRALAGLAAQGDADSLQSPEGEALYRACTSTGHHHHLICRSCGLTVEIAATDVEEWARRTAAAHGFREAEHIVDIFGLCATCASARDAADVAS

Crispr_ID: NZ_CP054038_11

• CRISPR_ID: NZ_CP054038_11
• CRISPR_location: 3903276-3903563
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP054038_11

Consensus_repeat	Method
GGTGATCGAGTAGCGACCGAAGGCCGCGTACCGAGATCCCGG	PILER-CR

spacers of NZ_CP054038_11

>11.1|3903318|48|NZ_CP054038|PILER-CR
GTCTCGATACGGTTCCTCCGTCGGCTACTCGACCACCGTGAGAGGTTC
>11.2|3903408|45|NZ_CP054038|PILER-CR
CGGCCGCTGTTTCACGTGAAACAACCGCGGTCGACTATCGAGCAC
>11.3|3903495|48|NZ_CP054038|PILER-CR
GTCTCGATACGGCTCCTTCGTCGCCCACTCGACCACCGTGAGAGGTTC

CRISPR arrays and Neighbor proteins around NZ_CP054038_11

CRISPR arrays

The CRISPR arrays of NZ_CP054038_11

>merge|NZ_CP054038|11|3903276-3903563|PILER-CR
GGTGATCGAGTAGCGACCGAAGGCCGCGTATCGAGATCCCGGGTCTCGATACGGTTCCTCCGTCGGCTACTCGACCACCGTGAGAGGTTCGGTGATCGAGTAGCGACCGAAGGCCGCGTACCGAGATCCCGGCGGCCGCTGTTTCACGTGAAACAACCGCGGTCGACTATCGAGCACGGCCGCGTACCGAGATCCCGGGTCTCGATACGGCTCCTTCGTCGCCCACTCGACCACCGTGAGAGGTTCGGTGATCGAGTAGCGACCGAAGGCCGCGTACCGAGATCCCGG

>NZ_CP054038|11|1|3903276-3903563|PILER-CR
GGTGATCGAGTAGCGACCGAAGGCCGCGTATCGAGATCCCGG	GTCTCGATACGGTTCCTCCGTCGGCTACTCGACCACCGTGAGAGGTTC
GGTGATCGAGTAGCGACCGAAGGCCGCGTACCGAGATCCCGG	CGGCCGCTGTTTCACGTGAAACAACCGCGGTCGACTATCGAGCAC
GGCCGCGTACCGAGATCCCGGGTCTCGATACGGCTCCTTCGT	CGCCCACTCGACCACCGTGAGAGGTTCGGTGATCGAGTAGCGACCGAA
GGCCGCGTACCGAGATCCCGG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054038.1|WP_172991410.1|3904776_3905403_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl|CDD|234637
NZ_CP054038.1|WP_172991411.1|3905431_3905953_-|DNA-binding-protein	unknown	unknown	gnl|CDD|224760
NZ_CP054038.1|WP_172991405.1|3899189_3900176_+|thioredoxin-disulfide-reductase	unknown	unknown	gnl|CDD|273540
NZ_CP054038.1|WP_172991414.1|3907481_3907820_-|ribonuclease-P-protein-component	unknown	unknown	gnl|CDD|376392
NZ_CP054038.1|WP_172991403.1|3892085_3893513_-|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl|CDD|131739
NZ_CP054038.1|WP_005054680.1|3907830_3907968_-|50S-ribosomal-protein-L34	unknown	unknown	gnl|CDD|366117
NZ_CP054038.1|WP_172991406.1|3900241_3900646_+|thioredoxin	unknown	unknown	gnl|CDD|200072
NZ_CP054038.1|WP_172991413.1|3907128_3907485_-|membrane-protein-insertion-efficiency-factor-YidD	unknown	unknown	gnl|CDD|237696
NZ_CP054038.1|WP_172991409.1|3904103_3904394_+|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|198403
NZ_CP054038.1|WP_172991404.1|3893537_3895064_-|methyltransferase	unknown	unknown	gnl|CDD|237872
NZ_CP054038.1|WP_172991742.1|3897528_3899097_+|murein-biosynthesis-integral-membrane-protein-MurJ	unknown	unknown	gnl|CDD|240528
NZ_CP054038.1|WP_172991402.1|3891677_3892034_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991407.1|3900715_3901063_-|tryptophan-synthase-subunit-alpha	unknown	unknown	unknown
NZ_CP054038.1|WP_172991412.1|3905986_3907120_-|membrane-protein-insertase-YidC	unknown	unknown	gnl|CDD|234941
NZ_CP054038.1|WP_172991743.1|3902113_3902905_-|ParA-family-protein	unknown	unknown	gnl|CDD|224113
NZ_CP054038.1|WP_172991741.1|3895279_3897508_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP054038.1|WP_172991408.1|3901112_3902114_-|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl|CDD|275105

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP054038.1|WP_172991410.1|3904776_3905403_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl|CDD|234637	PRK00107, gidB, 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG.	2.97577e-60
NZ_CP054038.1|WP_172991411.1|3905431_3905953_-|DNA-binding-protein	gnl|CDD|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	6.49199e-24
NZ_CP054038.1|WP_172991405.1|3899189_3900176_+|thioredoxin-disulfide-reductase	gnl|CDD|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	8.43322e-150
NZ_CP054038.1|WP_172991414.1|3907481_3907820_-|ribonuclease-P-protein-component	gnl|CDD|376392	pfam00825, Ribonuclease_P, Ribonuclease P.	1.10208e-22
NZ_CP054038.1|WP_172991403.1|3892085_3893513_-|CCA-tRNA-nucleotidyltransferase	gnl|CDD|131739	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP054038.1|WP_005054680.1|3907830_3907968_-|50S-ribosomal-protein-L34	gnl|CDD|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	1.93858e-09
NZ_CP054038.1|WP_172991406.1|3900241_3900646_+|thioredoxin	gnl|CDD|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.24391e-44
NZ_CP054038.1|WP_172991413.1|3907128_3907485_-|membrane-protein-insertion-efficiency-factor-YidD	gnl|CDD|237696	PRK14378, PRK14378, membrane protein insertion efficiency factor YidD.	2.40216e-35
NZ_CP054038.1|WP_172991409.1|3904103_3904394_+|GIY-YIG-nuclease-family-protein	gnl|CDD|198403	cd10456, GIY-YIG_UPF0213, The GIY-YIG domain of uncharacterized protein family UPF0213 related to structure-specific endonuclease SLX1. This family contains a group of uncharacterized proteins found mainly in bacteria and several in dsDNA viruses. Although their function roles have not been recognized, these proteins show significant sequence similarities with the N-terminal GIY-YIG endonuclease domain of structure-specific endonuclease subunit SLX1, which binds another structure-specific endonuclease subunit SLX4 to form an active heterodimeric SLX1-SLX4 complex. This complex functions as a 5' flap endonuclease in yeast, and has also been identified as a Holliday junction resolvase in human.	1.39005e-30
NZ_CP054038.1|WP_172991404.1|3893537_3895064_-|methyltransferase	gnl|CDD|237872	PRK14968, PRK14968, putative methyltransferase; Provisional.	3.55075e-23
NZ_CP054038.1|WP_172991742.1|3897528_3899097_+|murein-biosynthesis-integral-membrane-protein-MurJ	gnl|CDD|240528	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli MurJ (MviN) has been identified as essential for murein biosynthesis. It has been suggested that MurJ functions as the peptidoglycan lipid II flippase which is involved in translocation of lipid-anchored peptidoglycan precursors across the cytoplasmic membrane, though results obtained in Bacillus subtilis seem to indicate that its MurJ homologs are not essential for growth. Some MviN family members (e.g. in Mycobacterium tuberculosis) possess an extended C-terminal region that contains an intracellular pseudo-kinase domain and an extracellular domain resembling carbohydrate-binding proteins. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.37531e-89
NZ_CP054038.1|WP_172991412.1|3905986_3907120_-|membrane-protein-insertase-YidC	gnl|CDD|234941	PRK01315, PRK01315, putative inner membrane protein translocase component YidC; Provisional.	4.25179e-145
NZ_CP054038.1|WP_172991743.1|3902113_3902905_-|ParA-family-protein	gnl|CDD|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	2.32315e-79
NZ_CP054038.1|WP_172991408.1|3901112_3902114_-|ParB/RepB/Spo0J-family-partition-protein	gnl|CDD|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	5.66724e-71

Protein sequences

>NZ_CP054038.1|WP_172991743.1|3902113_3902905_-|ParA-family-protein
MTVSNQKGGVGKTTTAVNVAAALAAVGARVLVIDLDPQGNASTALGVPHTAETPSVYDVLIDEFPLADIVQVSPESPNLLCAPSTIHLAGAEIELVSQVAREHRLRTALEDYLASDIEHLDFVLIDCPPSLGLLTINAFTAASEVLIPIQCEYYALEGLSQLLGTVRMIQKHLNPGLFLSTIMLTMYDARTRLAQQVADEVRQHFPDQVLHTVIPRSVRVSEAPSFGQTVIAYDGQSAGAIAYREAAVEMIQREPARVNEGGA
>NZ_CP054038.1|WP_172991408.1|3901112_3902114_-|ParB/RepB/Spo0J-family-partition-protein
MAKRTGLGRGIGALIPTSEQGGPGEGRPADVFFPRAVAVAERPESDATTDADSDKNDSPAELVAVPGAHLAHIDPHAIVPNPRQPRTNFDPEHFAELVHSVREFGVLQPVVVRPAVDGTYELIMGERRTRAAREAGLDSIPAVIRDTADEHLLRDALLENLHRSQLNPLEEASAYQQLLEDFGITQEELATRIGRSRPQISNTIRLLKLPMPVQQRVAAGVLSAGHARAILSLGDTGAMQKLSDKIVNEDLSVRAAEQAAKMTDAGPQRSAKPQAGSRRAHLDEVAGRLGDRLNTRVRIALSAKKGQISIDFASIQDLNRILEEIGESGYGAS
>NZ_CP054038.1|WP_172991407.1|3900715_3901063_-|tryptophan-synthase-subunit-alpha
MTAHERIPGRRASLELLRAEAADELSSLIAERLRGGEDPWDFMEELPSVDELVVFLLRADNIAANGGVRPNAARHYRVLRQIALDYPPLTPAVWKLLGEANTHRKWDATVRVDAS
>NZ_CP054038.1|WP_172991406.1|3900241_3900646_+|thioredoxin
MAETGPRNNSPAFHVHDTETSPHRGENMTAKVTTSATFEQDVLQATGPVLVDFWAEWCGPCRMVAPVLDQIQTEHPEKITIVKLNVDENPDLAMKYQITSIPAMKVFNKGEVETTIIGAKPKFALEQDLAKYLG
>NZ_CP054038.1|WP_172991405.1|3899189_3900176_+|thioredoxin-disulfide-reductase
MRQVIIIGSGPAGYTAAIYAARANLSPLVVASSVEAGGELMNTTEVENFPGFPEGIMGPDLMTKMQEQAEKFGAEVLYDDVVSLDVTGPVKKITLGSGATHEADSIVFATGSAPRKIGIEGEQRLSGRGVSYCATCDGFFFREKAIAVVGGGDSAMEEATFLTKFASKVYVIHRREELRASKIMQERAFKNDKIEFVWNSAVVDVLGEDAVTGVVLESTVDGTRSELALEGVFVAIGNDPRTHLVHGSLDLTEAGTVWVDGRSSRTSVPGVFAAGDVVDPTYRQAVTAAASGTVAALDVEHYLAGLGEAGAPATDASEIDGLPEADAA
>NZ_CP054038.1|WP_172991742.1|3897528_3899097_+|murein-biosynthesis-integral-membrane-protein-MurJ
MIGAGTVVSRLTGFLRQIVLVSAVGATTGAGNAFAIANQLPNNIYAIISTGLLSAVVVPQIVKAAAHEDGGRAFVSKLFTLGTVVLLGTTVLAVVGAPLLVQLYAPGFPPAQQALAVAFAYWCLPQILFYGLYALVGEALNARRVYGPYTWAPIVNNIVSIAGFIAFIVLFGPAPAVSQWTPTMIAVLAGTATAGIVVQAGILFLFWRRTGLHVRPDFRWKGVGLGQIGRLAGWTFLMVLAGQLAGIVQSRVLSQVPEGAPGVLVSQNAWLLFMLPYSIIVLSIGTPYFTQLSEHAAAGRDDDVRDDIARSIRTLGLFVVVAVAALVAAAVPASRIFTDSAAEALDASVVLLCFLVSLLPLAVLFVIQRTFYAYDDTRTPFFFTLLQCALVVATALIAVSFAPEFVAAAVALGQSFASVVQVIVATWLLHRRLGSVRVREWMPALLRFILAAVPAAGAGFAVFVLFGGADGWMASDKVLGAVGAGVVGLVTLAVYIGILALFRVPDLAPAVAMARRLVGGRR
>NZ_CP054038.1|WP_172991741.1|3895279_3897508_+|hypothetical-protein
MLGGPLVGGPLVGGPAARADEVTPSPSPTAPALTGTTTFTLSPVENGVVDAGEALTVSVSVQNGTAATIPALSVDLGLGTTALPDRVALSAWLAGTTTSVTTQPVASATLESIPSGGEQGSGMTVPADDPLLEGLAPGVYPLVASYTSGDDADGDGLGDVVASTSVVIIPDPEATPVGISVVVPLTAGVRSEGLLSAVELAELTAPGGSLSAQVAAVAGTDAVIGIDPAIVASIRVLGDAAPASARAWLARLDDLPNERFSLQFGDADPAVQLEAGATRLLSPSSLAYAMDDADFPVVEETEDAAIGIDPSDDSAEVVPSPSPTGENPDEPVLPTTAELVAIDGARGATYWPTPGAASPEALARLGVLDAGDDRSVTILPSRATAEGASGRTIPAHAVAGDATLLVYDSIVTEALTRAASIDRTPLRGAALTEATAHLVFASAETGGRDLAVAVERGTDRSNVALHSAIIAAEQAPGTVARSLTRALSEPPRSVAIADATAGEERVATAAGFADDESELARFATILTDPALLTGPERAEILQLLSVSWAEEPVLAQAAAAVHRQGTLSTLDSVGLLPVSTFTLLGSDGGLRFWVRNELPYPVNLVLYTTPDDLRLDVQPATEVTATPQSNTRVEVPVQARVGSGEVTLDLQLRSPSSVAIGPAESVQVNVRAEWEAVGLTALGVVVGGLIVLGAARTVLKIRARRTAGATPQREPADPAEAPEVSPSGAAPAGSGDSETEAL
>NZ_CP054038.1|WP_172991404.1|3893537_3895064_-|methyltransferase
MIPEPAADICRLLADDLAAAGFRSEPLRAAWGPIADDAVARSLREPALRAIAGRDDPLATLGRLLVLGMPQPAAAVDAALPRTGAAGLAALGLAETPAGDTVTPTALIRPQAYADPSGVSQWWVASDLDEAALQGPLPEDHVLGVGGASLTLAAIQLPTPATTGLDLGAGCGIQSLRARRNVDRVVATDISESALRFTRLNALLNGVAGIETRAGSLFEPVAGERFDRIASNPPFVITPRVEGVPAYEYRDGGMVGDDLVAAFIGGVGTHLARGGVAQLLGNWETREGVAGLDRVREWVDASPVALDAWVVERESLDPLAYAELWVRDGGTVPGTERYARLISAWLDDFAARRVTAVGFGYVLLRRPLGDAQPTLARYEQIAQHVDADSLGAHLADALAAHDRLAGIDDTALAASILLVSPDVTEARHHLPGAEDPTVIELRQGGGFSRSLAVDPGLAALVGACDGDLPVGALIDAIAELLEVDAAALRADLLPRVRELAFTGFLRFA
>NZ_CP054038.1|WP_172991403.1|3892085_3893513_-|CCA-tRNA-nucleotidyltransferase
MLNMAEGVARLGALAESPVVASLATAFADAGFDLAIVGGPVRDALLGRTTNDLDFTTDARPDDILRIVKPIATAHWDIGRAFGTIGAKVAGEQVEITTYRADSYDGVTRKPTVEFGDSIEGDLVRRDFTVNAMALRVPARTLVDPTGGVEDLLRGVLRTPTDPRVSFGDDPLRMLRAARFSSQLGFDVDVDTLAAITALRQTLEIVSPERVQGEIVKLLQTDDPVRGIRILVETGLIDQFLPEIPALRLEVDEHHHHKDVYEHSLTVLQQAIELERERHPGAAPDVPLRLAALLHDIGKPATRRLEPGGGVTFYHHDLKGARMARKRLTALRFDTDTIRVVTRLIELHLRFFGYAEGSWTDSAVRRYVRDAEAELERLHILTRADVTTRNKRKAARLAGAYDDIERRITELAAQEQLDAMRPELDGNRIQEVLGIAPGREVGEAYRYLLDIRLDEGIIGVDAAEQRLREWWAARA
>NZ_CP054038.1|WP_172991402.1|3891677_3892034_+|hypothetical-protein
MTQNPPSARARANARAAATVFVLIGLLFSLVLTPLGLIAGLNARPAPLDGSGSNPFDLFAMGVFAVAAVAMVGFGIAGALLGRKGGSRVLFVLGLVATALLATGAIGIIYGAIVRVSY
>NZ_CP054038.1|WP_172991409.1|3904103_3904394_+|GIY-YIG-nuclease-family-protein
MAFMYILECADRSLYVGSTVNLEHRLFQHENGEGARYTRTRLPVKLLYCEEFESVSDAFAREKQVQNWGRAKRLALIKGQHEKLIRLSRKPPRASG
>NZ_CP054038.1|WP_172991410.1|3904776_3905403_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MIEIEQEPAAAAELFGDRIDLARAFTAALGEHGEERGLIGPLELPRLWTRHILNSAIAAPLFSGRVGDVGSGAGLPGLVLAIARPDVEWVLIEPMERRVAWLTEQVDALGLTNVEVMRARAEDWRGGPVLDAVTARAVSALKTLVPITAPLVRDGGELIFLKGASVAGEIEAAQKQIRKFRLSDVRVEVVGEGVISEPTRVLRAIVSR
>NZ_CP054038.1|WP_172991411.1|3905431_3905953_-|DNA-binding-protein
MTTTPEFAAVEDASSERTVATVEQLEQEGDIAADYLEGLLDIVDVDGDLALDVRAGRAYVTVEAGDDDGLELLSAPDTVQALQELTRIAVQNQTGRFSRLILDIGGSRDTRERELARLVDRAIARLDEGASQASLPSMSSYERKLVHDIVAERGFVSESYGEGAERHTVIRRG
>NZ_CP054038.1|WP_172991412.1|3905986_3907120_-|membrane-protein-insertase-YidC
MDLLLASTSAPADTGGGFDLFGIILWPLKWAVEAVLVFWHWLFTAVGLPPADGITWVLSIVGLVIVVRSALIPLFVRQIKSQRKMMEIAPELRKIQEKYKGKRDQLSREAMSRETMALYKKHGTTPVSSCLPLLVQMPVFFALFSVLNDVTRHYNDGVGGVGLLNAELTAEFYNAKLFGVASLHETLIDAVNSNNTAAIIILVTLVVLMILSQFFTQLQIISKNLSPEAKTGQAYQMQKVMLYVLPFAFVFSGVFFPLGVVIYWFVSNLWTMGQQFLVIREMPTPGSDAAKAREERLARKGKAIDASGKVVPMEKYLAEQQRLYEEAERAKAAAPKRQQPVGKQRAKKQAQKQPGTNGRPATPKPDAAAGDSAGAAS
>NZ_CP054038.1|WP_172991413.1|3907128_3907485_-|membrane-protein-insertion-efficiency-factor-YidD
MSVLPSYALGDAQFEASGLLRSIPLLPRNAVLALLHGYRATISHTYGDVCKYFPSCSAYAVGAVQQHGAVKGAAMTAARLGRCHPWAQGGVDDVPAHSHFRHALTRHGFVVPSPTGKD
>NZ_CP054038.1|WP_172991414.1|3907481_3907820_-|ribonuclease-P-protein-component
MLARPNRLTRGAEYKAVVRRGRRCAGAHTVTYVISSGDDRRDARFGFIVSKQVGGAVVRNTVRRRLKAVCADALPAVGAGNDIVIRALPGAASASFGDLRAEVTRCLARRAA
>NZ_CP054038.1|WP_005054680.1|3907830_3907968_-|50S-ribosomal-protein-L34
MSKRTFQPNNRRRAKKHGFRARMRTRAGRSILSARRAKGRTELSA

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	NZ_CP054038.1	1139179-1139216	1	0.974
NZ_CP054038_11	11.1|3903318|48|NZ_CP054038|PILER-CR	3903318-3903365	48	NZ_CP054038.1	3903837-3903884	2	0.958
NZ_CP054038_11	11.3|3903495|48|NZ_CP054038|PILER-CR	3903495-3903542	48	NZ_CP054038.1	3903837-3903884	2	0.958

1. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to position: 1139179-1139216, mismatch: 1, identity: 0.974

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
ggccccgtggggctcgaacccacgacccgcggattaaa	Protospacer
********************************** ***

2. spacer 11.1|3903318|48|NZ_CP054038|PILER-CR matches to position: 3903837-3903884, mismatch: 2, identity: 0.958

gtctcgatacggttcctccgtcggctactcgaccaccgtgagaggttc	CRISPR spacer
gtctcgatacggctcctccgtcgcctactcgaccaccgtgagaggttc	Protospacer
************.********** ************************

3. spacer 11.3|3903495|48|NZ_CP054038|PILER-CR matches to position: 3903837-3903884, mismatch: 2, identity: 0.958

gtctcgatacggctccttcgtcgcccactcgaccaccgtgagaggttc	CRISPR spacer
gtctcgatacggctcctccgtcgcctactcgaccaccgtgagaggttc	Protospacer
*****************.*******.**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	1681651-1681679	4	0.862
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP012182	Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence	701354-701387	6	0.824
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP012185	Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence	346048-346081	6	0.824
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP009123	Sphingopyxis fribergensis strain Kp5.2 plasmid pSfKp5.2, complete sequence	138105-138133	6	0.793
NZ_CP054038_1	1.1|203329|29|NZ_CP054038|CRISPRCasFinder	203329-203357	29	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	78607-78635	7	0.759
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	NZ_LR134460	Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence	117122-117159	7	0.816
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	MF919502	Mycobacterium phage Demsculpinboyz, complete genome	33086-33123	7	0.816
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	AY129336	Mycobacteriophage Che9d, complete genome	32973-33010	7	0.816
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	NC_042030	Mycobacterium phage Yoshi, complete sequence	34816-34853	7	0.816
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	NC_048788	Mycobacterium phage ThetaBob, complete genome	33889-33926	7	0.816
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP034813	Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence	30752-30780	7	0.759
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	KU728633	Mycobacterium phage Bipper, complete genome	32925-32962	8	0.789
NZ_CP054038_6	6.1|1139105|38|NZ_CP054038|CRISPRCasFinder	1139105-1139142	38	MK977701	Mycobacterium phage Cracklewink, complete genome	32904-32941	8	0.789
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1606124-1606152	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1389158-1389186	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP036456	Streptomonospora sp. M2 plasmid phiM2, complete sequence	16001-16029	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NC_017385	Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence	234361-234389	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	993930-993958	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	772089-772117	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1589418-1589446	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	2435-2463	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1135191-1135219	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	52969-52997	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	955502-955530	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NC_014626	Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence	42648-42676	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1135158-1135186	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1133981-1134009	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1133994-1134022	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1133994-1134022	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	930436-930464	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1133983-1134011	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1037363-1037391	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1133983-1134011	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1062708-1062736	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1135157-1135185	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1133994-1134022	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	915726-915754	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1134005-1134033	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1133983-1134011	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	915726-915754	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1031546-1031574	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP012910	Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence	10626-10654	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1677920-1677948	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	946778-946806	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1105809-1105837	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1123896-1123924	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1317220-1317248	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1453081-1453109	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1024792-1024820	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1368873-1368901	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1113561-1113589	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	828415-828443	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1037183-1037211	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	939287-939315	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1033884-1033912	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1032997-1033025	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1113550-1113578	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1120177-1120205	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1147800-1147828	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	997325-997353	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1120177-1120205	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1147800-1147828	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1120177-1120205	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	997348-997376	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1120181-1120209	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1147800-1147828	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1147800-1147828	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1147800-1147828	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	997348-997376	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1036352-1036380	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1017026-1017054	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1064973-1065001	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1111129-1111157	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	997348-997376	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1120176-1120204	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	997348-997376	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	997348-997376	8	0.724
NZ_CP054038_9	9.1|3539165|29|NZ_CP054038|CRISPRCasFinder	3539165-3539193	29	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1147801-1147829	8	0.724
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NC_014310	Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence	1671045-1671078	10	0.706
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022760	Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence	1583368-1583401	10	0.706
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022789	Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence	1583369-1583402	10	0.706
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022775	Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence	1598012-1598045	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1660089-1660122	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022762	Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence	1516231-1516264	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	1685442-1685475	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1715378-1715411	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1746865-1746898	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1891093-1891126	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	1367704-1367737	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1646112-1646145	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	258606-258639	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	633542-633575	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	2101930-2101963	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1724873-1724906	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP023017	Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence	1588139-1588172	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1432497-1432530	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1667281-1667314	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	1683998-1684031	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP014703	Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence	1515253-1515286	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1662100-1662133	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1730813-1730846	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022771	Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence	1516223-1516256	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022777	Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence	1515581-1515614	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022799	Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence	1516213-1516246	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1604914-1604947	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1661571-1661604	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1736353-1736386	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1730780-1730813	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1640210-1640243	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1714662-1714695	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1729574-1729607	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1624474-1624507	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1640522-1640555	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1714662-1714695	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1729610-1729643	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1640210-1640243	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022764	Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence	1598180-1598213	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1625120-1625153	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1639413-1639446	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1714662-1714695	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1714662-1714695	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1714662-1714695	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1729610-1729643	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1729599-1729632	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1624496-1624529	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1640439-1640472	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022797	Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence	1598163-1598196	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1621085-1621118	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1680917-1680950	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1714110-1714143	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1711977-1712010	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1729599-1729632	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1624496-1624529	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1640521-1640554	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1726757-1726790	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1730600-1730633	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1624496-1624529	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1624496-1624529	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1729610-1729643	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1714665-1714698	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1729621-1729654	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1729422-1729455	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022758	Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence	1598142-1598175	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	984799-984832	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	412396-412429	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	986403-986436	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	176974-177007	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1196368-1196401	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	767879-767912	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	751326-751359	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1386827-1386860	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	316413-316446	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	284266-284299	11	0.676
NZ_CP054038_2	2.1|251364|34|NZ_CP054038|CRISPRCasFinder	251364-251397	34	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	284266-284299	11	0.676

1. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 4, identity: 0.862

catcgcggcatccgcgccacatcgcggcg-	CRISPR spacer
catcgcggcatccgcgccaactcg-gtcgc	Protospacer
*******************  *** * ** 

2. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP012182 (Pseudonocardia sp. EC080610-09 plasmid pBCI2-1, complete sequence) position: , mismatch: 6, identity: 0.824

-gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
ccgcggtc-cggtcgcgcgccgttccgcggtcgcg	Protospacer
  * **** * *****.*********** ******

3. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP012185 (Pseudonocardia sp. EC080619-01 plasmid pBCI1-2, complete sequence) position: , mismatch: 6, identity: 0.824

-gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
ccgcggtc-cggtcgcgcgccgttccgcggtcgcg	Protospacer
  * **** * *****.*********** ******

4. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP009123 (Sphingopyxis fribergensis strain Kp5.2 plasmid pSfKp5.2, complete sequence) position: , mismatch: 6, identity: 0.793

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
gcgcgcggcatccgcgccacgtcgcagag	Protospacer
   *****************.****.* *

5. spacer 1.1|203329|29|NZ_CP054038|CRISPRCasFinder matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 7, identity: 0.759

caggggtcacgccggatcacctgttctca	CRISPR spacer
caggtgtcacgccggatgacctgcgaacg	Protospacer
**** ************ *****.   *.

6. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 7, identity: 0.816

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcaggtggggctcgaacccacgaccagcggattatg	Protospacer
** *  ********************* ****** * .

7. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to MF919502 (Mycobacterium phage Demsculpinboyz, complete genome) position: , mismatch: 7, identity: 0.816

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccagcggattatg	Protospacer
** *  ********************* ****** * .

8. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to AY129336 (Mycobacteriophage Che9d, complete genome) position: , mismatch: 7, identity: 0.816

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccagcggattatg	Protospacer
** *  ********************* ****** * .

9. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to NC_042030 (Mycobacterium phage Yoshi, complete sequence) position: , mismatch: 7, identity: 0.816

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccagcggattatg	Protospacer
** *  ********************* ****** * .

10. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to NC_048788 (Mycobacterium phage ThetaBob, complete genome) position: , mismatch: 7, identity: 0.816

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccagcggattatg	Protospacer
** *  ********************* ****** * .

11. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP034813 (Paracoccus sp. Arc7-R13 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
gaccgcagcatccccgccacatcgcgcaa	Protospacer
 *.***.****** ************  .

12. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to KU728633 (Mycobacterium phage Bipper, complete genome) position: , mismatch: 8, identity: 0.789

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccaacggattatg	Protospacer
** *  ********************* .***** * .

13. spacer 6.1|1139105|38|NZ_CP054038|CRISPRCasFinder matches to MK977701 (Mycobacterium phage Cracklewink, complete genome) position: , mismatch: 8, identity: 0.789

ggccccgtggggctcgaacccacgacccgcggatgaaa	CRISPR spacer
gggcgggtggggctcgaacccacgaccaacggattatg	Protospacer
** *  ********************* .***** * .

14. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

15. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

16. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP036456 (Streptomonospora sp. M2 plasmid phiM2, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
aggtgcggcatcagcgccacgtcgcggta	Protospacer
 . .******** *******.******..

17. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NC_017385 (Ketogulonicigenium vulgare WSH-001 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
agcagcgacatccgcgccacattgcggtt	Protospacer
 .. ***.**************.****. 

18. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

19. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

20. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

21. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

22. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

23. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

24. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

25. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NC_014626 (Ketogulonicigenium vulgare Y25 plasmid pYP12, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
agcagcgacatccgcgccacattgcggtt	Protospacer
 .. ***.**************.****. 

26. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

27. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

28. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

29. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

30. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

31. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

32. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

33. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

34. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

35. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

36. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

37. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

38. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

39. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

40. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

41. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

42. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP012910 (Ketogulonicigenium vulgare strain Hbe602 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
agcagcgacatccgcgccacattgcggtt	Protospacer
 .. ***.**************.****. 

43. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

44. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

45. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

46. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

47. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

48. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

49. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

50. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

51. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

52. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

53. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

54. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

55. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

56. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

57. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

58. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

59. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

60. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

61. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

62. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

63. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

64. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

65. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

66. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

67. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

68. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

69. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

70. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

71. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

72. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

73. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

74. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

75. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

76. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

77. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

78. spacer 9.1|3539165|29|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 8, identity: 0.724

catcgcggcatccgcgccacatcgcggcg	CRISPR spacer
attcgcgcgatccgcgccacatcgccaaa	Protospacer
  *****  **************** . .

79. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NC_014310 (Ralstonia solanacearum PSI07 plasmid mpPSI07, complete sequence) position: , mismatch: 10, identity: 0.706

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgattgcgctgtcgcacgcctatccgctgttcct	Protospacer
 *.   **************  ********. * 

80. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022760 (Ralstonia solanacearum strain T98 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgattgcgctgtcgcacgcctatccgctgttcct	Protospacer
 *.   **************  ********. * 

81. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022789 (Ralstonia solanacearum strain SL3175 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.706

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgattgcgctgtcgcacgcctatccgctgttcct	Protospacer
 *.   **************  ********. * 

82. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022775 (Ralstonia solanacearum strain T12 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

83. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

84. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022762 (Ralstonia solanacearum strain T95 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

85. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

86. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

87. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

88. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

89. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

90. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

91. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

92. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

93. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

94. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

95. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP023017 (Ralstonia solanacearum strain SL3022 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

96. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

97. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

98. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

99. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP014703 (Ralstonia solanacearum strain KACC 10722 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

100. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

101. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

102. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022771 (Ralstonia solanacearum strain T51 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

103. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022777 (Ralstonia solanacearum strain T11 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

104. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022799 (Ralstonia solanacearum strain SL2064 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

105. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

106. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

107. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

108. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

109. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

110. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

111. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

112. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

113. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

114. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

115. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

116. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

117. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022764 (Ralstonia solanacearum strain T82 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

118. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

119. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

120. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

121. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

122. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

123. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

124. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

125. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

126. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

127. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022797 (Ralstonia solanacearum strain SL2312 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

128. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

129. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

130. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

131. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

132. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

133. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

134. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

135. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

136. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

137. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

138. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

139. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

140. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

141. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

142. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

143. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022758 (Ralstonia solanacearum strain T101 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

144. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

145. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

146. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

147. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

148. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

149. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

150. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

151. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

152. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

153. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.   

154. spacer 2.1|251364|34|NZ_CP054038|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 11, identity: 0.676

gggggtcgctgtcgcacgccgttccgctgtcgcg	CRISPR spacer
tgatcgcgctgtcgcacgcctatccgctgttcat	Protospacer
 *.   **************  ********.