CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP054160	Serratia fonticola strain Biosolid 3 chromosome, complete genome	4 crisprs	csa3,cas3,DEDDh,DinG,WYL,RT	1	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054160_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054160_1

1262892-1263032

Orphan

Consensus_repeat	Method
TCTTGATGAGTTCGTGCGGCTTCGGAATGTAGGGTGTAGGAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054160_1

>merge|NZ_CP054160|1|1262892-1263032|CRISPRCasFinder
TCTTGATGAGTTCGTGCGGCTTCGGAATGTAGGGTGTAGGAACAAAAAGATAAGGTATTACGCAGAATAATCAGCGAACTCGATCGGTTCCCTCTCCCTCTTGATGAGTTCGTGCGGCTTCGGAATGTAGGGAGTAGGAAC

>NZ_CP054160|1|1|1262892-1263032|CRISPRCasFinder
TCTTGATGAGTTCGTGCGGCTTCGGAATGTAGGGTGTAGGAAC	AAAAAGATAAGGTATTACGCAGAATAATCAGCGAACTCGATCGGTTCCCTCTCCC
TCTTGATGAGTTCGTGCGGCTTCGGAATGTAGGGAGTAGGAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054160.1\|WP_024529521.1\|1260736_1260937_-\|YaeP-family-protein	unknown	unknown	gnl\|CDD\|179901
NZ_CP054160.1\|WP_021806099.1\|1255070_1257209_+\|lysine-decarboxylase-CadA	unknown	unknown	gnl\|CDD\|185298
NZ_CP054160.1\|WP_173408835.1\|1269832_1270396_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	unknown	unknown	gnl\|CDD\|236354
NZ_CP054160.1\|WP_098929928.1\|1251184_1251574_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|183156
NZ_CP054160.1\|WP_173408834.1\|1257268_1258729_+\|dipeptide-permease-DtpD	unknown	unknown	gnl\|CDD\|237971
NZ_CP054160.1\|WP_065685544.1\|1261151_1261700_+\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|377782
NZ_CP054160.1\|WP_021179933.1\|1260486_1260750_-\|Rho-binding-antiterminator	unknown	unknown	gnl\|CDD\|183241
NZ_CP054160.1\|WP_024485571.1\|1253627_1254974_+\|cadaverine/lysine-antiporter	unknown	unknown	gnl\|CDD\|182458
NZ_CP054160.1\|WP_021806092.1\|1268614_1269646_-\|methionine-ABC-transporter-ATP-binding-protein-MetN	unknown	unknown	gnl\|CDD\|236863
NZ_CP054160.1\|WP_161712212.1\|1276798_1278154_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|236510
NZ_CP054160.1\|WP_024485567.1\|1261703_1262117_+\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP054160.1\|WP_021807597.1\|1281836_1282256_-\|thioredoxin-TrxC	unknown	unknown	gnl\|CDD\|182889
NZ_CP054160.1\|WP_021179942.1\|1267968_1268622_-\|methionine-ABC-transporter-permease-MetI	unknown	unknown	gnl\|CDD\|182726
NZ_CP054160.1\|WP_065685547.1\|1265827_1266535_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	unknown	unknown	gnl\|CDD\|224634
NZ_CP054160.1\|WP_065686693.1\|1276389_1276722_-\|YfiM-family-lipoprotein	unknown	unknown	gnl\|CDD\|182705
NZ_CP054160.1\|WP_024485562.1\|1266531_1266936_-\|Rcs-stress-response-system-protein-RcsF	unknown	unknown	gnl\|CDD\|182725
NZ_CP054160.1\|WP_173410120.1\|1260120_1260435_+\|cytochrome-c	unknown	unknown	gnl\|CDD\|225418
NZ_CP054160.1\|WP_065686690.1\|1281015_1281720_-\|DTW-domain-containing-protein	unknown	unknown	gnl\|CDD\|225690
NZ_CP054160.1\|WP_024485564.1\|1263987_1265706_-\|proline--tRNA-ligase	unknown	unknown	gnl\|CDD\|236405
NZ_CP054160.1\|WP_024529523.1\|1262158_1262842_+\|envelope-stress-response-activation-lipoprotein-NlpE	unknown	unknown	gnl\|CDD\|236708

Protein	Function_ID	Function_description	E-value
NZ_CP054160.1\|WP_024529521.1\|1260736_1260937_-\|YaeP-family-protein	gnl\|CDD\|179901	PRK04964, PRK04964, hypothetical protein; Provisional.	3.29139e-37
NZ_CP054160.1\|WP_021806099.1\|1255070_1257209_+\|lysine-decarboxylase-CadA	gnl\|CDD\|185298	PRK15400, PRK15400, lysine decarboxylase.	0
NZ_CP054160.1\|WP_173408835.1\|1269832_1270396_+\|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase	gnl\|CDD\|236354	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase.	9.94473e-111
NZ_CP054160.1\|WP_098929928.1\|1251184_1251574_+\|VOC-family-protein	gnl\|CDD\|183156	PRK11478, PRK11478, VOC family protein.	3.99277e-84
NZ_CP054160.1\|WP_173408834.1\|1257268_1258729_+\|dipeptide-permease-DtpD	gnl\|CDD\|237971	PRK15462, PRK15462, dipeptide permease.	0
NZ_CP054160.1\|WP_065685544.1\|1261151_1261700_+\|YaeQ-family-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	8.52867e-100
NZ_CP054160.1\|WP_021179933.1\|1260486_1260750_-\|Rho-binding-antiterminator	gnl\|CDD\|183241	PRK11625, PRK11625, Rho-binding antiterminator; Provisional.	2.16467e-41
NZ_CP054160.1\|WP_024485571.1\|1253627_1254974_+\|cadaverine/lysine-antiporter	gnl\|CDD\|182458	PRK10435, cadB, cadaverine/lysine antiporter.	0
NZ_CP054160.1\|WP_021806092.1\|1268614_1269646_-\|methionine-ABC-transporter-ATP-binding-protein-MetN	gnl\|CDD\|236863	PRK11153, metN, DL-methionine transporter ATP-binding subunit; Provisional.	0
NZ_CP054160.1\|WP_161712212.1\|1276798_1278154_-\|CDP-diacylglycerol--serine-O-phosphatidyltransferase	gnl\|CDD\|236510	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase.	0
NZ_CP054160.1\|WP_024485567.1\|1261703_1262117_+\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	2.79486e-77
NZ_CP054160.1\|WP_021807597.1\|1281836_1282256_-\|thioredoxin-TrxC	gnl\|CDD\|182889	PRK10996, PRK10996, thioredoxin 2; Provisional.	1.25124e-103
NZ_CP054160.1\|WP_021179942.1\|1267968_1268622_-\|methionine-ABC-transporter-permease-MetI	gnl\|CDD\|182726	PRK10782, PRK10782, D-methionine ABC transporter permease MetI.	2.04977e-137
NZ_CP054160.1\|WP_065685547.1\|1265827_1266535_-\|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO	gnl\|CDD\|224634	COG1720, COG1720, Uncharacterized conserved protein [Function unknown].	2.94191e-68
NZ_CP054160.1\|WP_065686693.1\|1276389_1276722_-\|YfiM-family-lipoprotein	gnl\|CDD\|182705	PRK10759, PRK10759, YfiM family lipoprotein.	6.78561e-55
NZ_CP054160.1\|WP_024485562.1\|1266531_1266936_-\|Rcs-stress-response-system-protein-RcsF	gnl\|CDD\|182725	PRK10781, rcsF, Rcs stress response system protein RcsF.	3.65916e-75
NZ_CP054160.1\|WP_173410120.1\|1260120_1260435_+\|cytochrome-c	gnl\|CDD\|225418	COG2863, COG2863, Cytochrome c553 [Energy production and conversion].	1.03231e-29
NZ_CP054160.1\|WP_065686690.1\|1281015_1281720_-\|DTW-domain-containing-protein	gnl\|CDD\|225690	COG3148, COG3148, Uncharacterized conserved protein [Function unknown].	5.80157e-107
NZ_CP054160.1\|WP_024485564.1\|1263987_1265706_-\|proline--tRNA-ligase	gnl\|CDD\|236405	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional.	0
NZ_CP054160.1\|WP_024529523.1\|1262158_1262842_+\|envelope-stress-response-activation-lipoprotein-NlpE	gnl\|CDD\|236708	PRK10523, PRK10523, envelope stress response activation lipoprotein NlpE.	5.85931e-136

>NZ_CP054160.1|WP_024529523.1|1262158_1262842_+|envelope-stress-response-activation-lipoprotein-NlpE
MKQITIALFLAAGALSLLGCNNQYQPKEQALQPMQQSYQGLLPCADCSGLDTSLFLDEDGTFVLQETYRGAKDGDQTFASYGTWARTADKLVLTESNGEKRYFHPEGKQLRMLDRSGAPIVSQLNYVLSPVTKALPKTPMPLTGLYTYMADAAVFKDCATGKTFPVANNIALEQGYLKAQRAPGEPVFLMLNGHFSVQPSMEEGQMQKALIPEPGGKITFDSSKSCN
>NZ_CP054160.1|WP_024485567.1|1261703_1262117_+|aminoacyl-tRNA-hydrolase
MLELSRNVAIPDNEIELTAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLALNHHLVTGDGVVIIKAQEYRSQEMNREAALARLVALIQQAMVVEKTRRATKPSKGAKLRRLEGKVRKGATKALRGKVQP
>NZ_CP054160.1|WP_065685544.1|1261151_1261700_+|YaeQ-family-protein
MALKATIYKATLNIADMDRHFYCDTTLTLAQHPSETEQRMMLRLLAWICHADERLVFTKGLSAEDEPEIWRRNDHNGLEMWIELGLPDEKRIKKACNQSPRVVLYAYGDRAGHVWWQSMQSKVANHKNLSIRFLDDEQLSRLTALASRNMTLQATLQEGTIWLSDLQNSLEIQFAEWQQAQE
>NZ_CP054160.1|WP_024529521.1|1260736_1260937_-|YaeP-family-protein
MQQYCELVRRFYAQIGSGDLGYVPDALACVLKALDEVAANSELPSSVREQAAFAAANLLVSDHVDE
>NZ_CP054160.1|WP_021179933.1|1260486_1260750_-|Rho-binding-antiterminator
MLMNDEYQSINCDDYESLELACQHNYILKLELRDGEKFEGIATELKFTKGVEYLIVDQAGSALSLRLDHILSFSHPEIGTVVVSLSD
>NZ_CP054160.1|WP_173410120.1|1260120_1260435_+|cytochrome-c
MKLVSVMVVMASVLSFSAMAAGDAAAGKNKSASCMACHGAEGKVSVPMYPNLAGQNQMYLEHSLQAYKKGERSGGQAEVMKAYVSGLSDEDIADLAAYYGSLKP
>NZ_CP054160.1|WP_173408834.1|1257268_1258729_+|dipeptide-permease-DtpD
MKTPSQPRAIYYVVAIQIWEYFSFYGMRALLILYLTHQLGYSDSHAITLFSAYASLVYVTPILGGLLADRLLGNRVSVIAGAALMTLGHIVLGLGAVSANSLYLALGIIICGYGLFKSNISCLLGELYQAQDPRREGGFSLLYAAGNVGSILAPIACGLAAERYGWHVGFALAGIGMFAGLMIFLSGNKHFRHTRGVNIPLIQSTTLCLPHWFWLVAGVLCAPLFFALLFIHNWAGYLLGVVCAAAVVIVMRILWRVSGEQRRALWQIIILMMLGTLFWAFAQQGGSSISLFIDHFVDRQWFSWSVPTALFQSINAFAVMLGGVLLAWLMRSSQGNAQTVRIWCKFAFGLLLIAVGFMLMALNARWGQLHGQASMGMMVTGLAVMGFAELFIDPVAMAQITRLDIPGVTGVLTGIYMLATGSVANYLAGLIANQTTESQLGNAMIEAYGKVFTQIGWGAAGCAALVLAALVLWWGMTRRNDSAVNA
>NZ_CP054160.1|WP_021806099.1|1255070_1257209_+|lysine-decarboxylase-CadA
MNVIAIMNHMGVYFKEEPIRELHQALESLDFRIVYPNDREDLLKLIENNARLCGVIFDWDKYNLELCEEISQLNEYMPLYAFANTYSTLDVSLNDLRMQVRFFEYALGAAKDIAAKIKQNTDEYIDAILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEEYISRVFNAERSYMVTNGTSTANKIVGMYAAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFSRATIAKRVKETPNASWPAHAVITNSTYDGLLYNTDFIKQTLDVKSIHFDSAWVPYTNFHPIYKGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRMINGSIERAIKFRKEIKRLKVESEGWFFDVWQPEHIDEPECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMSKEGEMQPFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRAMTDFKRSFDLNLRVKNMLPSLYQEAPEFYENMRIQDLAQNIHRLVEHHNLPDLMYRAFEVLPTMVMNPYHAFQKELHGEVEEVYLEDMVGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQPDGRYTVKVLKAE
>NZ_CP054160.1|WP_024485571.1|1253627_1254974_+|cadaverine/lysine-antiporter
MASSKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAIWGWVISIVGAMSLAYVYARLATKNPQQGGPIAYAGEISPAFGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPALNNPVPAGIACIAIVWIFTFVNLLGGTWVSRLTTLGLVLVLIPIVITAVAGWHWFDVATYQANWNTSGTTDSHAVVKSILLCLWAFIGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIIYIAATQVMSGMFPAAQMAASGAPFAISASAIMGNWAAPMVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGELDKNGIPKKGLLLASCKMTALMVLITVMNSSGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNVRNLLSLVASVLGCGFCFIALMGANSFELSGTFIVSLIILMFYARKMNTRQVAKAAAAVNDSATAKAH
>NZ_CP054160.1|WP_098929928.1|1251184_1251574_+|VOC-family-protein
MLALRQVHHIAVIGSDYAASKHFYCDILGFTLLAEYYREERDSWKADLALNGQYVIELFSFPSPPARPSRPEACGLRHLAFSVEDIEASIAHLQAAGVVCEPVRVDPYTQSRFTFFSDPDGLPLELYEL
>NZ_CP054160.1|WP_024485564.1|1263987_1265706_-|proline--tRNA-ligase
MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNNANAIEVSMPVVQPADLWLESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNEISSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTTQESLQVTYDAMYEAYSKIFNRMGLDFRPVLADTGSIGGSASHEFQVLADSGEDDIVFSTGSDYAANIELAEAVAPAQPRAAATEELRIIDTPNAKTIAELVEQFQLPVEKTVKTLMVHAREESGHKLVALLVRGDHELNEIKAEKLPQVAVPLTFATEEEIRAIVGAGPGSLGPVNLPIPVVVDRSVAAMSDFGAGANIDGKHYFGINWERDLPLPQSADIRNVVEGDASPDGKGTLLIKRGIEVGHIFQLGTKYSEAMKATVQGEDGRNQVLTMGCYGIGVTRVVAAAIEQNHDDRGIIWPDAIAPFQVAILPMNMHKSFRVQALAEELYDTLRSHGIDVILDDRKERPGVMFADMELIGVPHSIVIGDRNLDSEEIEYKNRRVGEKQMIKTGEIVDFLLGQIQR
>NZ_CP054160.1|WP_065685547.1|1265827_1266535_-|tRNA-(N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase-TrmO
MTDFVFEQIGTIRSPYKEKFAVPRQPGLVEDGGGELLLLPPYNQPEAVRGLSEFSHLWVMFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPLGMSLIELKGIRTQGGEVVLELGSLDLVDGTPVVDIKPYLPFAESHPQARAGFAQAAPAGDMPVYFSPEAEQQLQQHVRRYPNLRRFITQVLAQDPRPAYRKEEASGREYAVWLLEFNVRWRIVDSQSEVLSLDAR
>NZ_CP054160.1|WP_024485562.1|1266531_1266936_-|Rcs-stress-response-system-protein-RcsF
MRVLPLCLLALALTGCSTQHTAPSTTNSTTTTAAPAPVKATPAARPAPVKLYKSAEELVGKPFRDLGEVSGESCQTTVQDSPPNLNTARKRMQTRASYMKANAVLLHDCQIVSGVAGCYQQAICQGSALNVSAK
>NZ_CP054160.1|WP_021179942.1|1267968_1268622_-|methionine-ABC-transporter-permease-MetI
MSEAMMWLMARGVWETVTMTFVSGFFGFVLGLPVGVLLYVTRPGQIIANNTVYKVLSGLVNIFRSIPFIILLVWMIPFTRMIVGTSIGLQAAIVPLTVGAAPFIARMVENALLEIPSGLVEAARAMGATPMQIITKVLLPEALPGLVNAATITLITLVGYSAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLILLVVLVYLIQFGGDRIVKAVTHK
>NZ_CP054160.1|WP_021806092.1|1268614_1269646_-|methionine-ABC-transporter-ATP-binding-protein-MetN
MIKLSNITKVFQQGSRSISALSDVTLHVPAGQIYGVIGASGAGKSTLIRCANMLERPTSGTVLVDGQDLTSLSEGELTRARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPRAEIKKRVVELLELVGLSDKHDAYPANLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISQGQLIEKDSVSEVFSHPKTPLAQQFIQATLHLDIPDDYAARLVPERTGGRQPLLRLEFTGRSVDAPLLSEAARRFNVNNNIISAQMDYAGGVKFGVMLAELHGSDEDAQATIKFLQENQVKVEVLGYV
>NZ_CP054160.1|WP_173408835.1|1269832_1270396_+|D-glycero-beta-D-manno-heptose-1,7-bisphosphate-7-phosphatase
MTQRVPAIFLDRDGTINIDHGYVHEIDDFQFIDGVIDACRELKSMGFALVLVTNQSGIARGKFSEEQFMRLTEWMDWSMADRDVDLDGIYFCPHHPEAVIEEYRQVCDCRKPQPGMLLQAQKELNIDLAASYMVGDKIEDMQAAAAAGVGTKVLVRTGKPVTEEGEKAADWVLNSLQELPAVIKKRV
>NZ_CP054160.1|WP_065686693.1|1276389_1276722_-|YfiM-family-lipoprotein
MRPLRPFILLPVLLFSSGCTHMANDSWTGKDKAQHFVASAAFAAAGAAYGDHQNWNEARSRSFGLLFSIGLGAAKELYDSREGGTGWSWKDFAWDVAGAATGYSIYHLAR
>NZ_CP054160.1|WP_161712212.1|1276798_1278154_-|CDP-diacylglycerol--serine-O-phosphatidyltransferase
MLSKFKRSKHQQHLAQLPKLPQTVADVRTLFTPADFRATLLESIANATTRIYLVALYLEHDDAGRDILNALYQAKQQRPELEICVLVDWHRAQRGRIGAAAANTNADWYCAMAAQHPQVSVPIYGVPVNTREALGVLHLKGFVVDDTVFYSGASINDVYLHQHEKYRYDRYQLITNNLLAVTLCDYIKQHLLTAGAVQRLDRDDRPKSLEIKNEIRLFRFALRRAAYQFQGNASNDELAVTPLVGLGKQSILNKTIHHLMSCTDQKLTLCTPYFNLPALLVRNIIYLLRQGKQVEIIVGDKTANDFYIPEDQPFKIIGALPYLYEINLRRFLSRLQRYVDTGQLIVRLWKDGDNSYHLKGMWVDDEWQLITGNNLNPRAWRLDLENAILFHDPKHEMQEQRHKELETIRTHTTVVGHYLELQSIQEYPVKVRKLIRRLRRIRIDRLISRIL
>NZ_CP054160.1|WP_065686690.1|1281015_1281720_-|DTW-domain-containing-protein
MTDNAVLRLRQDRLDRATRPFLARGSRAVRCQGCLLPQQNCLCATIKPQQANSRFCLIMFGAEPLKPSNTGRLIADILPDTLAFTWSRTEVDPGLLAAINDPARQPYVVFPASYADADRPVVSSLPAGGKPPLFIMLDGTWSEARKMFRKSPYLNQFPVFSLNVLASSDYLLRIASRPEQHCTAEVAAALLQQAGDEQAATGLSQHFNYFREQYLAGKPHRPEAPVTANQPQSA
>NZ_CP054160.1|WP_021807597.1|1281836_1282256_-|thioredoxin-TrxC
MNTVCAACNATNRVPEERLADGAKCGRCGHELFDGEVINATAATLDQLLQDDLPIVVDFWAPWCGPCRSFAPIFEDVAQERAGKVRFVKVNTEAEPELSARFRIRSIPTIMVFREGKMVDMLNGAMPKAPFDNWLNELV

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Crispr_ID: NZ_CP054160_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054160_2

3685609-3685722

Orphan

Consensus_repeat	Method
GCTCTTTTGCAAGTAAAGAGCTCATCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054160_2

>merge|NZ_CP054160|2|3685609-3685722|CRISPRCasFinder
GCTCTTTTGCAAGTAAAGAGCTCATCTTAGCAAACTTGATCGCCCCTCATTCAAGGCAAGTCACTACTATTGAAACACACTCGATCAGCTCTTTTGCAAGTAAAGAGCCCATCT

>NZ_CP054160|2|2|3685609-3685722|CRISPRCasFinder
GCTCTTTTGCAAGTAAAGAGCTCATCT	TAGCAAACTTGATCGCCCCTCATTCAAGGCAAGTCACTACTATTGAAACACACTCGATCA
GCTCTTTTGCAAGTAAAGAGCCCATCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054160.1\|WP_024486192.1\|3676270_3676594_-\|heavy-metal-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|179490
NZ_CP054160.1\|WP_021804975.1\|3687937_3688900_-\|putrescine-ABC-transporter-permease-PotH	unknown	unknown	gnl\|CDD\|182646
NZ_CP054160.1\|WP_024528628.1\|3698793_3699219_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|185073
NZ_CP054160.1\|WP_098927872.1\|3690247_3691357_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotF	unknown	unknown	gnl\|CDD\|182645
NZ_CP054160.1\|WP_173409530.1\|3678215_3679124_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274542
NZ_CP054160.1\|WP_021804981.1\|3693904_3694168_+\|GrxA-family-glutaredoxin	unknown	unknown	gnl\|CDD\|183036
NZ_CP054160.1\|WP_173409531.1\|3684390_3685500_-\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|366234
NZ_CP054160.1\|WP_173409533.1\|3697182_3697548_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214620
NZ_CP054160.1\|WP_021804969.1\|3681261_3681993_+\|arginine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|184969
NZ_CP054160.1\|WP_173409532.1\|3685822_3686950_-\|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC	unknown	unknown	gnl\|CDD\|131140
NZ_CP054160.1\|WP_065685362.1\|3692406_3693309_-\|30S-ribosomal-protein-S6--L-glutamate-ligase	unknown	unknown	gnl\|CDD\|182468
NZ_CP054160.1\|WP_065685351.1\|3676804_3677071_-\|type-VI-secretion-system-PAAR-protein	unknown	unknown	gnl\|CDD\|380263
NZ_CP054160.1\|WP_098931676.1\|3680500_3681229_+\|arginine-ABC-transporter-ATP-binding-protein-ArtP	unknown	unknown	gnl\|CDD\|182980
NZ_CP054160.1\|WP_074028920.1\|3679687_3680236_+\|lipoprotein	unknown	unknown	gnl\|CDD\|182526
NZ_CP054160.1\|WP_173410213.1\|3677317_3678265_-\|IdsF	unknown	unknown	unknown
NZ_CP054160.1\|WP_021804970.1\|3682002_3682719_+\|arginine-ABC-transporter-permease-ArtQ	unknown	unknown	gnl\|CDD\|182979
NZ_CP054160.1\|WP_065685361.1\|3691752_3692232_-\|YbjN-domain-containing-protein	unknown	unknown	gnl\|CDD\|341122
NZ_CP054160.1\|WP_161713540.1\|3693366_3693666_-\|DUF1418-family-protein	unknown	unknown	gnl\|CDD\|369264
NZ_CP054160.1\|WP_065685357.1\|3682718_3683387_+\|arginine-ABC-transporter-permease-ArtM	unknown	unknown	gnl\|CDD\|182978
NZ_CP054160.1\|WP_065685366.1\|3698140_3698725_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054160.1\|WP_024486192.1\|3676270_3676594_-\|heavy-metal-binding-domain-containing-protein	gnl\|CDD\|179490	PRK02877, PRK02877, hypothetical protein; Provisional.	8.26471e-64
NZ_CP054160.1\|WP_021804975.1\|3687937_3688900_-\|putrescine-ABC-transporter-permease-PotH	gnl\|CDD\|182646	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional.	0
NZ_CP054160.1\|WP_024528628.1\|3698793_3699219_-\|universal-stress-protein	gnl\|CDD\|185073	PRK15118, PRK15118, universal stress protein UspA.	4.16609e-36
NZ_CP054160.1\|WP_161713540.1\|3693366_3693666_-\|DUF1418-family-protein	gnl\|CDD\|369264	pfam07214, DUF1418, Protein of unknown function (DUF1418). This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In E. coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter. The function of this family is unknown.	1.77469e-34
NZ_CP054160.1\|WP_173409530.1\|3678215_3679124_-\|hypothetical-protein	gnl\|CDD\|274542	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein. Members of this protein family belong to the Rhs element Vgr protein family (see TIGR01646), but furthermore all are found in genomes with type VI secretion loci. However, members of this protein family, although recognizably correlated to type VI secretion according the partial phylogenetic profiling algorithm, are often found far the type VI secretion locus.	5.10307e-11
NZ_CP054160.1\|WP_021804981.1\|3693904_3694168_+\|GrxA-family-glutaredoxin	gnl\|CDD\|183036	PRK11200, grxA, glutaredoxin 1; Provisional.	4.44101e-63
NZ_CP054160.1\|WP_173409531.1\|3684390_3685500_-\|IS481-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	1.15413e-24
NZ_CP054160.1\|WP_173409533.1\|3697182_3697548_-\|hypothetical-protein	gnl\|CDD\|214620	smart00326, SH3, Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.	0.00308534
NZ_CP054160.1\|WP_021804969.1\|3681261_3681993_+\|arginine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|184969	PRK15007, PRK15007, arginine ABC transporter substrate-binding protein.	2.3116e-146
NZ_CP054160.1\|WP_173409532.1\|3685822_3686950_-\|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC	gnl\|CDD\|131140	TIGR02085, 23S_rRNA_uracil747-C5-methyltransferase_RlmC, 23S rRNA (uracil-5-)-methyltransferase RumB. This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP054160.1\|WP_065685362.1\|3692406_3693309_-\|30S-ribosomal-protein-S6--L-glutamate-ligase	gnl\|CDD\|182468	PRK10446, PRK10446, 30S ribosomal protein S6--L-glutamate ligase.	0
NZ_CP054160.1\|WP_065685351.1\|3676804_3677071_-\|type-VI-secretion-system-PAAR-protein	gnl\|CDD\|380263	NF033420, T6SS_PAAR_dom, type VI secretion system PAAR protein. The PAAR domain is widespread, but this model represents a narrow clade that may occur in type VI secretion systems (T6SS), either free-standing or fused to a long extension. Effector domains of T6SS may be separate proteins, or may be fused to on of the tube or spike proteins: VgrG (spike), Hcp (tube), or this PAAR family (spike tip). Members of this family that have long extensions are likely to be T6SS effectors.	8.31539e-38
NZ_CP054160.1\|WP_098931676.1\|3680500_3681229_+\|arginine-ABC-transporter-ATP-binding-protein-ArtP	gnl\|CDD\|182980	PRK11124, artP, arginine transporter ATP-binding subunit; Provisional.	0
NZ_CP054160.1\|WP_074028920.1\|3679687_3680236_+\|lipoprotein	gnl\|CDD\|182526	PRK10533, PRK10533, putative lipoprotein; Provisional.	3.11431e-100
NZ_CP054160.1\|WP_098927872.1\|3690247_3691357_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotF	gnl\|CDD\|182645	PRK10682, PRK10682, putrescine transporter subunit: periplasmic-binding component of ABC superfamily; Provisional.	0
NZ_CP054160.1\|WP_021804970.1\|3682002_3682719_+\|arginine-ABC-transporter-permease-ArtQ	gnl\|CDD\|182979	PRK11123, PRK11123, arginine ABC transporter permease ArtQ.	1.05691e-161
NZ_CP054160.1\|WP_065685361.1\|3691752_3692232_-\|YbjN-domain-containing-protein	gnl\|CDD\|341122	cd17511, YbjN_AmyR-like, YbjN protein family is structurally similar to type III secretion system chaperones. This YbjN protein family includes Escherichia coli YbjN, Erwinia amylovora AmyR, and similar proteins. YbjN proteins share a class I type III secretion chaperone (T3SC)-like fold with type III secretion system (T3SS) chaperone proteins but appear to function independently of the T3SS. YbjN is an enterobacteria-specific protein. In E. coli, it acts as a sensory transduction regulator that may play important roles in regulating bacterial multicellular behavior, metabolism, and survival under stress conditions. E. amylovora AmyR, a functionally conserved ortholog of E. coli YbjN, is a stress and virulence associated protein that regulates the ams operon. Ams proteins are required for amylovoran biosynthesis. AmyR may also regulate the Rcs phosphorelay system, an atypical two-component signal transduction (TCST) system present only in Enterobacteriaceae and positively regulates amylovoran biosynthesis by activating the ams operon transcription.	2.72008e-18
NZ_CP054160.1\|WP_065685357.1\|3682718_3683387_+\|arginine-ABC-transporter-permease-ArtM	gnl\|CDD\|182978	PRK11122, artM, arginine ABC transporter permease ArtM.	7.12329e-149

>NZ_CP054160.1|WP_173409531.1|3684390_3685500_-|IS481-family-transposase
MELLMPWNERSAMSLRTEFVLFASQEGANIRALCRQFGIAPATGYKWLHRWLSDGPHGLNERSRVPHHSPSRTPDIVVEHLHTAHLAHPMWGARKLKRWLEMQGYTLPAASTVHNLMRRHDLLPGGPSPAPTVGRFEHDAPNRLWQMDFKGHFPFAGGRCHPLTLLDDHSRFSLCLAHCPNERRVTVQSQLIAVFERYGLPERMTMDNGAPWGDTTGSWTALELWLMRQGIRVGHSRPYHPQTQGKLERFHRSLKAELLQGRWFTDASQLQEVFDAWRDSYNLERPHEALSMAVPASRYQPSSRQYNGNPAAAEYDEGVLVRKVGKAFIGEYVGLKESEREGYYEVWWYSTKVGMIDLRNRSIIMGKGC
>NZ_CP054160.1|WP_065685357.1|3682718_3683387_+|arginine-ABC-transporter-permease-ArtM
MLEFIPEIIKGLHTSLSLTIVALIVALLMSLVLTVILTLKTPVLTQLVKVYITLFTGTPLLVQIFLIYYGPGQFPAIREYPWLWNLLSQPWLCAMIALALNSAAYTTLLFHGAVRAIPAGQWQSCEALGMSRQQTLRILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGYSQLMYGRTYDVMVFGAAGIVYLCVNGLLTLLMRMVERRALAFERRN
>NZ_CP054160.1|WP_021804970.1|3682002_3682719_+|arginine-ABC-transporter-permease-ArtQ
MNEIQPLASAAGMTVGLAVCALVLGLILAMLFAVWESSRWKAVSWLGTAWVTLLRGLPEILVVLFIYFGSSQLLMMLSDGFVLNFGLFQLPVQLSIDNFEVSPFLCGVIALALLYSAYASQTLRGALKAVPLGQWESGQALGLSKTAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYVIAAAIYLVITLLSQYILKRIELRTTRFERGPA
>NZ_CP054160.1|WP_021804969.1|3681261_3681993_+|arginine-ABC-transporter-substrate-binding-protein
MKKLLIAAVLAGISVSASAAETIRFATEASYPPFEFVAADNKIQGFDVDLANALCKEMQAECTFTNQGFDSLIPSLKFKRFDAVMAGMDITPEREKQVLFSKPYYDNSALFIAEKGKVADVAALKGKRVGVQNGTTHQKFLTDKHPEITTVGYDSYQNAILDLKNGRVDAVFGDTAVVNEWLKENAALTAVGDKVTDKDYFGSGLGIAMRLQNTELQGKFNAALDKIKQDGTYETIYKKWFQQ
>NZ_CP054160.1|WP_098931676.1|3680500_3681229_+|arginine-ABC-transporter-ATP-binding-protein-ArtP
MSIQLKDINCFYGAHQALFNITLDCPAGETLVLLGPSGAGKSSLLRVLNLLEMPRSGHLQIAGNQFDFKQSPGEKSIRELRQNVGMVFQQYNLWPHLTVVQNLIEAPCRVLGLSKAQAMARADKLLTRLRLTDFADRFPLHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAGTGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASHFAQPQTVEFANYLSH
>NZ_CP054160.1|WP_074028920.1|3679687_3680236_+|lipoprotein
MKTKTLAVVLPLALFLSACTTVEPAFKDVGVRTGACVEGGPDTVAQKFYDLRIQQGPSTALPDSSRLAQLQPYLSQVLYQDLVSASQHPGKHTITGDLFSGNAQGPTSATVASASTIPNTDAKNIPLRVQLTHQKEGASAISWQDEVLMVREGTCWVVDDIRFLNIPPHAASGTLRQVLENQ
>NZ_CP054160.1|WP_173409530.1|3678215_3679124_-|hypothetical-protein
MLSTSKDATGLRFTLNIGDLPAETFVVSGFTLHEQFSSLFTLELDAASAKPSVEFRSVLDNVATLTILFVQSWKSKVGGELKEDASSGLVYIERQVSLGLAPLIGLKMTLDLLQAFAAWYKMDVLLAAVREGLMSKEQAYNEGGNAAFIGMKFELVAEGTIDLKLAFKSDAKNEWEWEKTDSVEAKLSLTIEANVRAGVRFYIANGALTIGGKAVAEGCLGLDNPTKDKMELVLYHNGITAKVYVSYTVGIARDSQVDNESNDVPEETSSSQEAEQEKKNEKEWIIHDKLEKKDSTYRINFG
>NZ_CP054160.1|WP_173410213.1|3677317_3678265_-|IdsF
MISWKRKTQHIVSTLGKIAICFLLISPFYTKAKDMSDEKYLFSFKSNKSACILRVNDFPAVDSFSADQRTMSAGFNLTAFLADGVNEIELLAGSRNPKDPQTLYKDSSCEVIVSKDSKDSSIEIARIKLSVNEKGQISANESTHYNGGAFNSKIIEGYTSSEDDYGLYKAKSTLILNGLPKWSWVKATPVTDNDLPAIRKAYEDIMVMINNRDIEGLKKVTKISNDEMGVAEGTSPALMFISTDFPQHVADKSLTTLPISWDKYKLRTYRGGRLFRFSVGYYQHSPLRFQNAEGKLVFGYNPYFSIIDGKVTLVR
>NZ_CP054160.1|WP_065685351.1|3676804_3677071_-|type-VI-secretion-system-PAAR-protein
MGNTVKIGDKDTGHGSHPPTPVITGSTTVKVDGLPLARKGDVLAAHGHDRNISGGSSSVFIDGQPAARTGDAVSCGGVLIGGGSVNIG
>NZ_CP054160.1|WP_024486192.1|3676270_3676594_-|heavy-metal-binding-domain-containing-protein
MQLSTTHTLEGFTITEYCGVVTGEAILGANIFRDFFAGVRDIVGGRSGAYEKELRKARQLAFQEVQEQAKELGANAVVGIDIDYQTVGKDSTMLMVSVSGTAVKVSR
>NZ_CP054160.1|WP_173409532.1|3685822_3686950_-|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC
MHCALYSAGTCRSCQWLEQPYPQQLEEKQHHLQSLLVDRDVAQWLEPVTGEQSAFRNKAKMVVSGSVERPLLGMLHRDGTPVDLCDCPLYPASFAPIFAVLKDFIPRAGLTPYNVARKRGELKYLLLTESTFSGGLMLRFVLRSDSKLAQLRAALPWLQEQLPQLKVISANIQPVHMAIMEGEHEIPLTEQQALEERFNQVPLYIRPQSFFQTNPQVASQLYATARDWVRALGIASMWDLFCGVGGFGLHCAQPQTRLTGIEISAEAIACAKQSAQTLGLQQVDFQALDSTRFATAEGEVPELVLVNPPRRGIGNELCDYLNRMAPRYILYSSCNALSMAKDLAMLPDYRVERVQLFDMFPHTAHYEVLTLLVRK
>NZ_CP054160.1|WP_021804975.1|3687937_3688900_-|putrescine-ABC-transporter-permease-PotH
MTLLSERSPEPPARVPGPIKAFIQRLQMAHGRKLVIALPLLWLLLLFMLPFLIVFKISLSELALAVPPYTDLMSWADGKLDIALNFANYLQLTDDPLYIDAYLQSLQIAAVSTLCCLVIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKNNGVLNNFLMWLGVIDQPLVILHTNLAVYIGIVYSYLPFMVLPIYTALTRLDYSLVEASLDLGAKPLKTFFSVIMPLTRGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQEFFNNRDWPVASAVATVMLLLLIVPILWFHKHQNKEMGGQG
>NZ_CP054160.1|WP_098927872.1|3690247_3691357_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein-PotF
MVTQRKKWLSGVVGGLLMTACLTASAADNTLHIYNWSDYIAPDTLAKFQKETGIKVVYDVFDSNEVLEGKLMAGSTGYDLVVPSSNFLERQSKAGIFEALDKSKIPNYKNLDPEMLQLVAHNDKENKYGIPYMMVTTGIGYNVDKVKAVLGKDAPVDSWDLILKPENLEKLKSCGVSFLDAPSEVYATVLHYLGKDPNSTSAEDYTGAANDLLMKLRPNIRYFHSSQYINDLANGDICVAIGWSGDIMQAANRAKEAKNGVNVAYSIPKEGALTYFDMFAMPADAKNKDAAYQFLNFLLKPEVIADISNHVFYANAVKDATPLVNAEVRDNPNVYPPADIRAKLYTLNVQSPKLDRVITRAWTKVKSGK
>NZ_CP054160.1|WP_065685361.1|3691752_3692232_-|YbjN-domain-containing-protein
MDSLIVPDLALLRRWLDQLGISFFECDSCQALHLPHMQNFDGVFDAKLDLVDNVILFSALAEVKPTALIPLVADLSQINASSLTIKAFVDIQDDNLPKLIVCQSLGIAVGVAYEQFAHFMQQGEEQISMVILEARANDLLFMGDEEENPATVASQPMLH
>NZ_CP054160.1|WP_065685362.1|3692406_3693309_-|30S-ribosomal-protein-S6--L-glutamate-ligase
MKIAILSRDGSLYSCKRLREAAEQRGHRIDVIDPQSCYMNINPAAPSIHYRGRRLEHYDAVIPRIGSAITFYGTAVLRQFELLGSYPLNESVAITRARDKLRSLQLLARQGIDLPITGFAHSPDDTGDLIELVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDAFRGLNAHILVQEYIREAKGCDIRCLVVGGRVVAAIERQAKPGEFRSNLHRGGTARKVHITGKERATAIKAVETLGLDVAGVDILRADRGPLVMEVNASPGLEGVETTTGLDIAGMMIEYIEQRARPGFRLKSGG
>NZ_CP054160.1|WP_161713540.1|3693366_3693666_-|DUF1418-family-protein
MRSFGDLPRSVLVLEGLGMVLLILSYLSIHDYVRLPGMLASQPAAVGMIFLGVFMMVPAAAFLVWRVVQGLSPLVRGGQPPQNDRRTPPKDKQDQGPQD
>NZ_CP054160.1|WP_021804981.1|3693904_3694168_+|GrxA-family-glutaredoxin
MFAVIFGRPGCPYCVRAKELAEKLTEERDDFNFRYVDIHAEGITKADLEKTVGKPVETVPQIFIDQTHIGGCTDFEAYAKENLNLFQ
>NZ_CP054160.1|WP_173409533.1|3697182_3697548_-|hypothetical-protein
MKFIAIGQHRSEYPDPITFKSGTPLIIGDRYEGDEGWDNWYFCTIPNHAGGWVPEELIERSNKPGHGIAKDDYTAKELDVNEGDELLAIKFLNGWVWCQRLSDQDIGWVPKSILQDIKSGR
>NZ_CP054160.1|WP_065685366.1|3698140_3698725_+|hypothetical-protein
MKVSFLGYLFLVLTSSFFCGNLSAVSTGTLTVKFGQTTEDTFKATHPEAVNVGYNNELRGNIYKETPDNNKDKRSNIIFESTKDVFVLFDQNKNLSALQLQFKNDQFSLISAILASKYTTVVKKTPLIGSDYMELYNDGVSIYLMDPFFYSNTSLFFIKTDIRDKILKNLPSEMLNDDINVLNYLVERSFPSIE
>NZ_CP054160.1|WP_024528628.1|3698793_3699219_-|universal-stress-protein
MTYQHIVIATDLSDDAELLVRKGSELAGALQAKLSLIYIDEQANHYSEFGSGEFNYADKTFSERVKNMLNAIQQQAEYPISEVIIGRGDLSEALNNAIREKGIDLVIFGHHHDMWSRLVSSTRRTINHIAVDMLVVPIEKH

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Crispr_ID: NZ_CP054160_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054160_3

4042048-4042149

Orphan

Consensus_repeat	Method
CGATCGAGTTTGCTGAGGTGACCTCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054160_3

>merge|NZ_CP054160|3|4042048-4042149|CRISPRCasFinder
CGATCGAGTTTGCTGAGGTGACCTCTTTTTTCCAAAAAAGCAGGGGCTAATAGCTCCCTCTCCTTTTTGGGAACCGATCGAGCTTGCTGAGGTGACCTCTTT

>NZ_CP054160|3|3|4042048-4042149|CRISPRCasFinder
CGATCGAGTTTGCTGAGGTGACCTCTTT	TTTCCAAAAAAGCAGGGGCTAATAGCTCCCTCTCCTTTTTGGGAAC
CGATCGAGCTTGCTGAGGTGACCTCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054160.1\|WP_173409640.1\|4043957_4044731_-\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP054160.1\|WP_024530543.1\|4039428_4039911_+\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP054160.1\|WP_173409642.1\|4047675_4048248_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP054160.1\|WP_065686747.1\|4029294_4030212_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	unknown	unknown	gnl\|CDD\|211689
NZ_CP054160.1\|WP_098928194.1\|4046085_4047555_+\|molybdate-ABC-transporter-ATP-binding-protein-ModF	unknown	unknown	gnl\|CDD\|182852
NZ_CP054160.1\|WP_024483131.1\|4052902_4053241_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183165
NZ_CP054160.1\|WP_173409636.1\|4033638_4034349_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274567
NZ_CP054160.1\|WP_021180335.1\|4044880_4045024_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	unknown	unknown	gnl\|CDD\|371231
NZ_CP054160.1\|WP_024530541.1\|4041112_4041934_+\|pyridoxal-phosphatase	unknown	unknown	gnl\|CDD\|182523
NZ_CP054160.1\|WP_173409635.1\|4033305_4033554_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054160.1\|WP_173409639.1\|4042167_4043271_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP054160.1\|WP_173409643.1\|4050526_4051678_+\|galactokinase	unknown	unknown	gnl\|CDD\|179937
NZ_CP054160.1\|WP_173409638.1\|4038078_4039353_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP054160.1\|WP_173409637.1\|4035048_4035816_-\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP054160.1\|WP_065686458.1\|4043271_4043961_-\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP054160.1\|WP_074027962.1\|4034375_4035056_-\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP054160.1\|WP_173409641.1\|4045203_4045995_+\|molybdenum-dependent-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182640
NZ_CP054160.1\|WP_161712455.1\|4051671_4052715_+\|galactose-1-epimerase	unknown	unknown	gnl\|CDD\|182931
NZ_CP054160.1\|WP_065686740.1\|4039954_4040950_-\|6-phosphogluconolactonase	unknown	unknown	gnl\|CDD\|182912
NZ_CP054160.1\|WP_098928179.1\|4030208_4030460_-\|DUF2132-domain-containing-protein	unknown	unknown	gnl\|CDD\|378300

Protein	Function_ID	Function_description	E-value
NZ_CP054160.1\|WP_173409640.1\|4043957_4044731_-\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	9.80593e-177
NZ_CP054160.1\|WP_024530543.1\|4039428_4039911_+\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	4.20789e-104
NZ_CP054160.1\|WP_173409642.1\|4047675_4048248_+\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	8.79859e-29
NZ_CP054160.1\|WP_065686747.1\|4029294_4030212_+\|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	7.40366e-113
NZ_CP054160.1\|WP_098928194.1\|4046085_4047555_+\|molybdate-ABC-transporter-ATP-binding-protein-ModF	gnl\|CDD\|182852	PRK10938, PRK10938, putative molybdenum transport ATP-binding protein ModF; Provisional.	0
NZ_CP054160.1\|WP_024483131.1\|4052902_4053241_+\|hypothetical-protein	gnl\|CDD\|183165	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF.	1.68588e-21
NZ_CP054160.1\|WP_173409636.1\|4033638_4034349_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|274567	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. [Transport and binding proteins, Amino acids, peptides and amines].	1.79691e-98
NZ_CP054160.1\|WP_021180335.1\|4044880_4045024_-\|multidrug-efflux-pump-associated-protein,-AcrZ-family	gnl\|CDD\|371231	pfam10766, AcrZ, Multidrug efflux pump-associated protein AcrZ. AcrZ is associated with the AcrA-TolC multidrug efflux pump, it may enhance the ability of the pump to recognize and export certain substrates.	2.23595e-17
NZ_CP054160.1\|WP_024530541.1\|4041112_4041934_+\|pyridoxal-phosphatase	gnl\|CDD\|182523	PRK10530, PRK10530, pyridoxal phosphate (PLP) phosphatase; Provisional.	0
NZ_CP054160.1\|WP_065686740.1\|4039954_4040950_-\|6-phosphogluconolactonase	gnl\|CDD\|182912	PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.	0
NZ_CP054160.1\|WP_173409639.1\|4042167_4043271_-\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP054160.1\|WP_173409643.1\|4050526_4051678_+\|galactokinase	gnl\|CDD\|179937	PRK05101, PRK05101, galactokinase; Provisional.	0
NZ_CP054160.1\|WP_173409638.1\|4038078_4039353_+\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP054160.1\|WP_173409637.1\|4035048_4035816_-\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	3.4443e-100
NZ_CP054160.1\|WP_074027962.1\|4034375_4035056_-\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	1.92625e-113
NZ_CP054160.1\|WP_173409641.1\|4045203_4045995_+\|molybdenum-dependent-transcriptional-regulator	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	0
NZ_CP054160.1\|WP_161712455.1\|4051671_4052715_+\|galactose-1-epimerase	gnl\|CDD\|182931	PRK11055, galM, galactose-1-epimerase; Provisional.	0
NZ_CP054160.1\|WP_065686458.1\|4043271_4043961_-\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	2.46345e-149
NZ_CP054160.1\|WP_098928179.1\|4030208_4030460_-\|DUF2132-domain-containing-protein	gnl\|CDD\|378300	pfam09905, VF530, DNA-binding protein VF530. VF530 contains a unique four-helix motif that shows some similarity to the C-terminal double-stranded DNA (dsDNA) binding domain of RecA, as well as other nucleic acid binding domains.	6.50159e-44

>NZ_CP054160.1|WP_024530541.1|4041112_4041934_+|pyridoxal-phosphatase
MSYRVIALDLDGTLLDNQKRILPQSLAALEEARAAGVKVVVVTGRHHVAIHPFYQALQIDTPAICCNGTYLYDFQQKKVLASDPLAKEQAKQVLQLLKQNDIHGLMYVDDAMLYQETSGHVIRSLAWSETLPVAQRPTLLQVNSLMQAADEAQAIWKFATSHSDLPALRSFAEMVEKELGLACEWSWHDQVDIAKGGNSKGKRLQQWVESQGLSMDQVVAFGDNYNDLSMLEAVGLGVAMGNADNAIKERADLVIADHLQPGIAEVIRSRVLN
>NZ_CP054160.1|WP_065686740.1|4039954_4040950_-|6-phosphogluconolactonase
MKQIVYVASPESQQIHVWQLDDKGALALLQTVEVAGQVQPMAIHPDNTHLYVGVRPAFGIVSYRIAEDGTLHEAGMAPLPGSPTHISTDLQGRYLFSASYSGNCASISPIGHDGVVLAPTQQIDGLTAPHSANIDPTNQLLLVPCLKEDRIRLFNLSQQGQLTPHGQEAVATASGAGPRHMAFHGNDKFAYCVNELDGTVDVFAIEANGGKYTLVQSLDMMPADFTGTRWAADIHLTPNGRFLYTSDRTASILTVFSVSEDGGKIAVVGHHATEEQPRGFNIDHSGRFVIAAGQKSGHIGVYQIDQDSGELTDVARYPVGKGPMWVSVLAK
>NZ_CP054160.1|WP_024530543.1|4039428_4039911_+|kinase-inhibitor
MAFRLYSNDLQDGAKMPERQVFNGMGYHGDNLSPHLAWEDAPAGTKSFAITVYDPDAPTGSGWWHWVVANIPANVHELPQGAGSGKPGLPAGAVQTRTDFGKAGYGGAAPPQGESHRYQFTVHALDVESIPVDAEASGAMVGFNIHFHSLGKATLTVKYS
>NZ_CP054160.1|WP_173409638.1|4038078_4039353_+|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MSVSPCDIEFDRRHIWHPYTSMTQPLPCYPVVSASGVELQLDDGRLLVDGMSSWWAAIHGYNHPHLNQAAVQQLEKMSHVMFGGITHPAAIELCRKLVAMTPEALQCVFLADSGSVAVEVALKMALQYWQARGERRQRILTLRHGYHGDTFGAMSVCDPDNSMHSLYQGYLATHLFATAPQCRFDQPWDEQDIVPFAELLEQHAGEIAAVILEPVVQGAGGMRIYHPTYLQRVRELCDRYQILLIADEIATGFGRTGKLFACEHADVVPDILCLGKALTGGYMTLSATLTTRHIAETISNGAAGCFMHGPTFMGNPLACAVACASLSLLEENRWQHQVAAIEAMLRQQLLPLVVSPKVADVRVLGAIGVVEMHQPVDVALLQRGFVERGVWIRPFGKLIYLMPPYIITPEQLTRLTGAIAAAVE
>NZ_CP054160.1|WP_173409637.1|4035048_4035816_-|malonyl-ACP-O-methyltransferase-BioC
MTSAIDTVNKQAVAAAFSRAAASYDTAAVLQREVGERLLGMGLSHPGQQVLDAGCGTGYFSRRWRELGKQVSALDLAPGMLAFARQQQAADRYLLGDIEHISLPTASVDICFSSLVVQWCSDLPLALAELYRVTRPGGLILFSTLAEGALHELGDAWQQVDGERHVNDFLPPAHIAAACHSYRHQLTADWQTLNYPDVMTLMRSLKGIGATHLHQGREAGLLSRQRLAALQAAYPCRDGQFPLSYHLAYGVIYRD
>NZ_CP054160.1|WP_074027962.1|4034375_4035056_-|ATP-dependent-dethiobiotin-synthetase-BioD
MIKRWFVTGTDTEVGKTVASSALLQAARAAGWRCAGYKPVASGSEMTDEGLRNSDALALQRNSSVALDYAVVNPYTFAEPTSPHIVSQAEGRPISLTRLSTGLRHLEQRADWLLVEGAGGWFTPLSEHETFADWVQQEQLPVILVVGIKLGCINHALLTALAIQQSGLTLAGWIANDVTPPGKRHQEYLATLCRLLPAPLLGEIPHLPQVEQQALGQYLDLTRLNP
>NZ_CP054160.1|WP_173409636.1|4033638_4034349_+|ABC-transporter-ATP-binding-protein
MLSLRAVNQYYGQQHTLWDVSLELPRGQCTLLLGRNGVGKTTLINCIMGHLPIVSGSMTWQLADEPPQNLLPQPVENRALLGIGYVPQGRQIFSQLSVEENLQVALLAGRGKVRRMPPLIYNLFPRLQAMRMRRAGDLCQNEQQQLALGRALMLEPELLILDEPTAGMSPSLATEIGLVLRKLNQELGMTILLVEHQLPFARHLADRFCLMDKGRNVANGTLGQLDKGLIDAYLTD
>NZ_CP054160.1|WP_173409635.1|4033305_4033554_-|hypothetical-protein
MLITLIAAQAKKLENGGYRSFGGSRGAFWYAMNFFAEDNRAGSGRFSPECAGSSASNAPKQEMQFPGHHALRNKKGGLLLLC
>NZ_CP054160.1|WP_098928179.1|4030208_4030460_-|DUF2132-domain-containing-protein
MTATPSPSKDPLHGITLEQLLNKLVAQYGWNGLAERIRINCFSSDPSIKSSLKFLRRTPWARKQVEDLYIDSVSDNPWLRGQD
>NZ_CP054160.1|WP_065686747.1|4029294_4030212_+|uridine-diphosphate-N-acetylglucosamine-binding-protein-YvcK
MRNRTLADLDRVVALGGGHGLGRVMSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDTRNCLNQLITEPSVASAMFEYRFSGNGELAGHNLGNLMLKALDHLSVRPLEAINLVRSLLKIDAALIPMSEQPVDLMAHDHEGHQVYGEVNIDQLRIMPQELMLSPPVHATREAVEAIAQADLILIGPGSFLTSLMPLLLLEDLTQALRRSSANMVYIGNLGRELSVAAAALTLQDKLALMEEKIGRKMIDAVIVGPAVDTSAMQDRIVVQQPLEASDIPYRHDRLLLRQALDTALVQLASRD
>NZ_CP054160.1|WP_173409639.1|4042167_4043271_-|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLELDFSQQLGDLNLNVQANLPAQGITAIFGLSGAGKTSLINAIGGLTLVQQGRIVLNGRTLVDTASGVCLPPEKRRVGYVFQDARLFPHYRVRGNLQYGMAASMRGQFDSIVELLGIAPLLNRLPLTLSGGEKQRVAIGRALLTAPEMLLMDEPLASLDMPRKRELLPYLERLAQDVNIPILYVSHSMDEILRLAEQVMVLDHGQVRAYGGLEEVWASSALRPWLQREDQSSVLSVSVIEHHPRYAMTALALGDQRLWVGGIEAPVGSQMRIRINAADVSLVLQPPANSSIRNILPAKVVECLDVAGQVEVKLTVGENILWARITPWARDDLAIRPGQWLYAQVKSVSISRDGPSPQPSPTGRGSY
>NZ_CP054160.1|WP_065686458.1|4043271_4043961_-|molybdate-ABC-transporter-permease-subunit
MILSEYEWQAVELSLKVSSLAVICSLPLGILMAWILVRCNFPGKSLLDSIIHLPLVLPPVVVGYLLLIAMGRRGFIGEWLYNWFGFSFSFSWRGAALASAVVAFPLMVRAIRMSLEAVDTRLEQAARTLGANPWRVFFTITLPLSLPGVIVGVVLAFARSLGEFGATITFVSNIPGETRTIPLAMYTLIETPGAESAAARLCVIAIVLALAALMVSEWLARWGRKRMGL
>NZ_CP054160.1|WP_173409640.1|4043957_4044731_-|molybdate-ABC-transporter-substrate-binding-protein
MKQQWINWVGGVALACGLVAQVSAAEKITVFAAASLTNALQDIATEYQKGKDVEVVSSFASSSTLARQIEQGAPADMFISADQQWMDYAIDKQQMVKDTRYILLGNELVLIAAKAAKQDKITINKQTDWAKLLNGGRLSVGDPDHVPAGIYAKEALQNLGAWTTLEPQLARANNVRSAMAMVEREEAPLGIVYGSDAVASDKVKVIAIFPEDSHKPVEYPMAIVKDHQTPAVTAFYDYLKTPAAAAIFERYGFTPRK
>NZ_CP054160.1|WP_021180335.1|4044880_4045024_-|multidrug-efflux-pump-associated-protein,-AcrZ-family
MLELLKSLLFAVVMVPVVMAIILGLIYGLGEVFNIFSKVGHPKENRS
>NZ_CP054160.1|WP_173409641.1|4045203_4045995_+|molybdenum-dependent-transcriptional-regulator
MQAEILLTLKLQQKLFADPRRIALLKQVVHTGSISQGAKLAGISYKSAWDAINEMNQLAEQTVVERATGGKGGGGAQVTRYGLRLIQLYDLLGQIQQKAFDVLQQDNLPLDSLLAAIARFSLQTSARNLFFGTVIERDHQQVQQHISLLLADGHTRLTAAVTQQSADRLQLTPGKEVLALIKAPWVKLSTDPASTGLADNALPGCIASIQPGSDHSEVLVTLNGGETLCATVSNQELAQLKLSVGTPVHALFNADRVIVATLC
>NZ_CP054160.1|WP_098928194.1|4046085_4047555_+|molybdate-ABC-transporter-ATP-binding-protein-ModF
MSSLHISQGSFRLSDTRTLELDRLDIQSGDSWAFVGANGSGKSALARALAGELTLLKGERHSEFRRVVRISFEQLQKLVSDEWQRNNTDLLSVDEDDTGRTTAEIIQEELNDPARCTQLAEQFGITPLLTRRFKYLSTGETRKTLLCRALMAQPDLLILDEPFDGLDVNSRAQLATLLGELSQQGYTLVLVLNRFDEIPGFIEQVGVLADCTLTSQGPREQVMADALVAQLAHSENLNGLTLPETEDPTQVIRLPDDRPLIVLRDGVVSYNDRPILNQLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKRHIGYVSSSLHLDYRVSSSVRNVILSGFFDSIGIYQAVSDRQHQLTSQWLALLGLGAMGDAPFHSLSWGQQRLALIARALVKHPALLILDEPLQGLDPLNRQLVRRFVDVLIQQGSTQLLFVSHHAEDAPQCITHRFSFIPEGDGYRYQQDVLA
>NZ_CP054160.1|WP_173409642.1|4047675_4048248_+|cysteine-hydrolase
MSAALIIIDLIEDLAGPKGRANHCREHIVTRDVIAHVNAATAYARVRKIPVIWLRTGFADNYHDIPRHSPLFNQLKHIGALRLSNGGCHWLAGLEVKTEDLCLEKKGLSAFAGNNLLTWLQQHRCHHLLLGGISTPLAIESTARQAHDAGLQVTVLQDLCAAPTDEIHQQSLETLQNLGEVMRSQAWMKG
>NZ_CP054160.1|WP_173409643.1|4050526_4051678_+|galactokinase
MSLKQLTQALFTEHFGYAPALTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISGSPRNDRQIRVLAADYENQQDQFSLDEPIVSHANLRWADYVRGVVKHLQTRDASFGGADLVISGNVPQGAGLSSSASLEVAVGQVLQALYQLPLDGVALALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLETRAVPMPADVAVVIINSNVKRGLVDSEYNTRRQQCEAAARFFGVKALRDVSPDLFFPILHELDPIVAKRARHVITENDRTLAAADALAAGNLKLMGKLMAESHASMRDDFAITVPPIDTLVEIVKEVIGERGGVRMTGGGFGGCIVALMPQDLVESVRTAVAREYPLRTNGLQETFYVCKASQGSGLC
>NZ_CP054160.1|WP_161712455.1|4051671_4052715_+|galactose-1-epimerase
MLSDNSAVAPDGQPFILTTLRNAAGMTVTFMDWGATWLSALLPLKSGEQRELLLGCQTPQDYLHQGAYLGATVGRYANRIAHASLNIAGKPHPLIANQGEHQLHGGPNGFHARRWQIVKQDEQQVIYQLHSPDGDQGFPGNLDVTLSYRLTADHRLEIEYQAQTDRACPVNLTNHAYFNLDGAGHDARQQRLQLFADRYLPVDGDGIPSADLTAVAGTGMDFRQPKTLQQDLLRDRDQQRVKGYDHAYLLHDTCHGLASPAAHLWSADGKVAMTVFTTAPALQLYSGNYLGGTPARDGGSYQNYAGVALESEFLPDSPNHPEWPQPDCWLQPGQRYQSATHYQLIPI
>NZ_CP054160.1|WP_024483131.1|4052902_4053241_+|hypothetical-protein
MRLITALPLLAGLLLSTNLMAADTAAKTPSPAQAAQQKRMTDCNQQATTQSLKGSDRTTFMSTCLKAEGHHTEKALTPQQQKMKDCNADAAKKSLKGDERKTFMSSCLKKTA

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Crispr_ID: NZ_CP054160_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054160_4

4692779-4692878

Orphan

Consensus_repeat	Method
ACAGCTCCCTCTCCCTGTGGAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054160_4

>merge|NZ_CP054160|4|4692779-4692878|CRISPRCasFinder
ACAGCTCCCTCTCCCTGTGGAAGGGGCCGATCGAGTTTGCTGAGATTATCGCTTTTCTTACAAACGAGCAGGGGCTGACAGCTCCCTCTCCCTGTGGGAG

>NZ_CP054160|4|4|4692779-4692878|CRISPRCasFinder
ACAGCTCCCTCTCCCTGTGGAAG	GGGCCGATCGAGTTTGCTGAGATTATCGCTTTTCTTACAAACGAGCAGGGGCTG
ACAGCTCCCTCTCCCTGTGGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054160.1\|WP_173409802.1\|4690629_4691448_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226233
NZ_CP054160.1\|WP_173409798.1\|4682849_4683428_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197715
NZ_CP054160.1\|WP_065686985.1\|4701745_4702294_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|237920
NZ_CP054160.1\|WP_065686982.1\|4697057_4697585_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP054160.1\|WP_173409797.1\|4681349_4682804_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_CP054160.1\|WP_173409799.1\|4683709_4683979_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054160.1\|WP_098928654.1\|4692894_4693146_-\|DinI-like-family-protein	unknown	unknown	gnl\|CDD\|368780
NZ_CP054160.1\|WP_173409804.1\|4694261_4694876_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP054160.1\|WP_161713853.1\|4696535_4697036_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|185193
NZ_CP054160.1\|WP_065686978.1\|4693574_4694150_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|182126
NZ_CP054160.1\|WP_173409805.1\|4695604_4696522_-\|fimbrial-protein	unknown	unknown	gnl\|CDD\|370330
NZ_CP054160.1\|WP_173409801.1\|4689528_4689909_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|214866
NZ_CP054160.1\|WP_065686984.1\|4701124_4701667_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP054160.1\|WP_065686976.1\|4691593_4692046_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|105206
NZ_CP054160.1\|WP_173409800.1\|4688864_4689410_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP054160.1\|WP_065686980.1\|4694872_4695538_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP054160.1\|WP_173409803.1\|4692106_4692496_-\|SHOCT-domain-containing-protein	unknown	unknown	gnl\|CDD\|378276
NZ_CP054160.1\|WP_173410236.1\|4688107_4688809_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_CP054160.1\|WP_173409806.1\|4697607_4700247_-\|fimbrial-biogenesis-usher-protein	unknown	unknown	gnl\|CDD\|237919
NZ_CP054160.1\|WP_173410235.1\|4685384_4687937_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729

Protein	Function_ID	Function_description	E-value
NZ_CP054160.1\|WP_173409802.1\|4690629_4691448_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|226233	COG3710, CadC, DNA-binding winged-HTH domains [Transcription].	1.72643e-22
NZ_CP054160.1\|WP_173409798.1\|4682849_4683428_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197715	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon. lux regulon (activates the bioluminescence operon.	1.92545e-13
NZ_CP054160.1\|WP_065686985.1\|4701745_4702294_-\|fimbrial-protein	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	2.78253e-37
NZ_CP054160.1\|WP_065686982.1\|4697057_4697585_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	8.53504e-29
NZ_CP054160.1\|WP_173409797.1\|4681349_4682804_+\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	1.42715e-21
NZ_CP054160.1\|WP_098928654.1\|4692894_4693146_-\|DinI-like-family-protein	gnl\|CDD\|368780	pfam06183, DinI, DinI-like family. This family of short proteins includes DNA-damage-inducible protein I (DinI) and related proteins. The SOS response, a set of cellular phenomena exhibited by eubacteria, is initiated by various causes that include DNA damage-induced replication arrest, and is positively regulated by the co- protease activity of RecA. Escherichia coli DinI, a LexA-regulated SOS gene product, shuts off the initiation of the SOS response when overexpressed in vivo. Biochemical and genetic studies indicated that DinI physically interacts with RecA to inhibit its co-protease activity. The structure of DinI is known.	0.000228037
NZ_CP054160.1\|WP_173409804.1\|4694261_4694876_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.08692e-17
NZ_CP054160.1\|WP_161713853.1\|4696535_4697036_-\|type-1-fimbrial-protein	gnl\|CDD\|185193	PRK15293, PRK15293, fimbrial protein SthD.	1.01802e-16
NZ_CP054160.1\|WP_065686978.1\|4693574_4694150_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|182126	PRK09871, PRK09871, tyrosine recombinase; Provisional.	2.0144e-98
NZ_CP054160.1\|WP_173409805.1\|4695604_4696522_-\|fimbrial-protein	gnl\|CDD\|370330	pfam09160, FimH_man-bind, FimH, mannose binding. Members of this family adopt a secondary structure consisting of a beta sandwich, with nine strands arranged in two sheets in a Greek key topology. They are predominantly found in bacterial mannose-specific adhesins, since they are capable of binding to D-mannose.	1.32329e-66
NZ_CP054160.1\|WP_173409801.1\|4689528_4689909_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|214866	smart00862, Trans_reg_C, Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.	5.30534e-08
NZ_CP054160.1\|WP_065686984.1\|4701124_4701667_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	5.44122e-34
NZ_CP054160.1\|WP_065686976.1\|4691593_4692046_+\|hypothetical-protein	gnl\|CDD\|105206	PRK11383, PRK11383, YiaB family inner membrane protein.	4.44971e-60
NZ_CP054160.1\|WP_173409800.1\|4688864_4689410_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.66198e-15
NZ_CP054160.1\|WP_065686980.1\|4694872_4695538_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.94241e-05
NZ_CP054160.1\|WP_173409803.1\|4692106_4692496_-\|SHOCT-domain-containing-protein	gnl\|CDD\|378276	pfam09851, SHOCT, Short C-terminal domain.	0.000257745
NZ_CP054160.1\|WP_173410236.1\|4688107_4688809_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	2.87054e-87
NZ_CP054160.1\|WP_173409806.1\|4697607_4700247_-\|fimbrial-biogenesis-usher-protein	gnl\|CDD\|237919	PRK15193, PRK15193, outer membrane usher protein; Provisional.	0
NZ_CP054160.1\|WP_173410235.1\|4685384_4687937_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0

>NZ_CP054160.1|WP_173409803.1|4692106_4692496_-|SHOCT-domain-containing-protein
MTYHLLTLWDILVTTFSFFFFIAYLFILFQVVSDLFRDHQLSGFYKAVWIVFLLFIPLLTSLVYLIARGKGMAERHRAQVQKSVSATNEYIREVAGKSPAEQISDAKKLLDDGVITESEYQQLKAKALV
>NZ_CP054160.1|WP_065686976.1|4691593_4692046_+|hypothetical-protein
MSAAPQNTTSPAFILASWAALLGGFAVFLLGLWNAEMELNEKGYYFAVLILGLFSAITIQKTVRDQQDNLPVTHIYIITCWVAFAIAVGLLCIGLWNAKLLLSEKGFYGVSFFLSLFGAIAVQKNTRDMANKRRAEGDDNEEAGSQFPTE
>NZ_CP054160.1|WP_173409802.1|4690629_4691448_+|winged-helix-turn-helix-domain-containing-protein
MKHKVIINDTVLYLPEEHRLCPLRARGKETVLNVPASRCLQLMLQHPGEVISQSDFFNEVWQKNGQYVTANTLYQNISLVRKGMREAGLSKNIIRTVPKVGVVFSGTVEIQQEESANVIVQQSNKPEPPPVEDLQPEIPPTKRTALNQTKLLRYGLFTTFIIVMLILLVSNQSQSARFFDSHNRVATINQCSVYIDRDDLETNVAGYKEYLTVNNVVCNPDEFVYITRTPANHSTLVLFCDTTAQGDLRCSSRFQIDNQHDPLSGLRPTWSQ
>NZ_CP054160.1|WP_173409801.1|4689528_4689909_-|helix-turn-helix-domain-containing-protein
MENRLYGFLIDDDIQFDIANRRLLYYSDGASERTLFFKVISLNEIQTRLLIYLLANCRDAVIYKNDIMKNVWEEINLSSSSQRLWHAINELRKKLASLGLPEDFIANVHGIGYSVDNHRVSSLFIK
>NZ_CP054160.1|WP_173409800.1|4688864_4689410_-|type-1-fimbrial-protein
MKKLAIAASLIAVFGTVGLAQAASTGTITFNGELTANTCDVVVDGQQADATVILPTVSTSQLQTATRTAGDTGFVMALSNCAGTLETASAFFQAGASVDAVTGRLLNTTGGATNVSLQLLDASSPTQAVIKAGSQEQVGAMTYQNVTGGSATLPYIVRYYAEAPTTAGTVVSSVVYSIQYQ
>NZ_CP054160.1|WP_173410236.1|4688107_4688809_-|fimbria/pilus-periplasmic-chaperone
MKLLSTNVLKVGVVAAAALFSVSSLASVVISGTRVIYPSDAKEVSVKISNGGPSPVLLQNWIDNGDADAKPAAIKVPFVLTPPMNRVEPSKGQTLRISYAGGSLPMDKESVFWLNVLEVPAKAQAKVTENRLQMAFRSRIKLFYRPAGLQGNANEAAKALTWNSQGNRVQASNPTPYYVSLVNLSVNGKKLDHAMVAPRSTMTLDLAGSAGSKVTGSFVNDYGAVNTFDAVIK
>NZ_CP054160.1|WP_173410235.1|4685384_4687937_-|fimbrial-biogenesis-outer-membrane-usher-protein
MAVSTPQGIAKNLEFDASFLNVDDEKSVDLSRFANGSSGLPGVYKTALYVNNQPISNTDIEFKARADKSVYPCLTRELIKNIAFDFAKLPADFLTSLSKGEVCFDLQSQLPVAQVNYDSNEQRLDIMVPQVYMLNTARGTVSPELWDSGVPALLMGYNVNGYTSESHGKTFNSLFAGVNAGLNVGAWYLRHNGSYTRMDNGPNQYNNLNTYLQRDIPVLKARVLMGQSNTTGQLFDTLPFTGIQLASDERMLPESLRGYAPDIRGIARTNARVTVRQGGQVLYETTVTPGEFLINDLYPTGYGGDLQVTVRESDGTEQTFSVPYASVAQLLRPGSSRYSITAGEVRSDNLREKPALYQGTYQLGLTNAITGYGGLQASQDYYALQLGAAVGTPIGAWAFDVTQARTHLGNDTDANGRHEAGNSLSGQSYRVSYSKLISETNSNLSLAAYRFSTDGFMDFMTAMQTRDAVAEGFSPESISRAKNRLTVTAGQGLPDNWGQLYISGSLQNYWNKDGSEKQYQVGYNNRYKDLSYGLSINRSFSSLGTAQTNYLLSFSLPLGRSDQTHTPQLRMDLSHDSSGRYGQQATVSGTAGMDNQFSYGVTAMNANQGMGSSGSLSGNYRTPATALSGTYSTGKGYQSASAGMNGTVIAHSGGVTFTPYTSDTFALVEAKGAEGAKVSSYPGVSIDSRGYAIVPYLNPYQMNEISIDPKGTAADVELDNTSQKVAPYSGAVVKMKYTTKQGTPILVNATYQGEPVPFGADIFDSKGNSVGSVGQGGQLYARVSQDKGQLRVKWGEGGEMQCTVSYVLMPVAKGQAQIQQFNSPCAATTSAGSQRVKLANNDAISAVNQG
>NZ_CP054160.1|WP_173409799.1|4683709_4683979_-|hypothetical-protein
MQKPINKVSGLLMGMLITVISNPSWAALTVTVGSAQQLTVTVPVNPPVISAGVDVPVGTVLYQGNLNMLDTYYETKWTTQLGWGRAPKH
>NZ_CP054160.1|WP_173409798.1|4682849_4683428_-|helix-turn-helix-transcriptional-regulator
MAGRINIITDNYYFFVGLKAYLHAEGRVINLMALNELKNTSASSFGKEDVLVFHMLNSMSEMSFLIAVAKFPGKVIFLPREMKIKFNLDFGRHIAFAEDADVDAVFNELVKIVGGELPVATFLQDSLTRREKAVLLSMIDGMNMQAIGHSLRISTKTVYTHRRNALHKLGVRNLFQACPIKTSVLNSAIFSG
>NZ_CP054160.1|WP_173409797.1|4681349_4682804_+|alpha/beta-hydrolase
MFIKWIKRIALLLVVLIVGALGMRVYDTQRGPSLQLWHTFVPDEMHADEIDKASWADYLTAEDAIFKEVRQNVTDKLDSSQQTSLNRYYAESPIYPEKFPTDWNRSYTMMPEGKPKGAVVLLHGLTDTPYSLRHIADNYREYGYVAVGIRLPAHGTVPGALTDVDWQDWMAATRLAIREAKRLAGDNVPLHIVGFSNGGALAMKYTLDALDDPRLTKPQRVVLISPMIGVTSFARFAGIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSFQLTQALQKQIAADSRNGKMGELPPILTFQSVMDSTVSTRAVITALYNHLPDNGSEVVLFDLNQAVAFGPLLRSSSYTALPRLLPPPPRNYTATIVTNVTPETTDTEARTIVAGQTAETTDLLGITYLPDIFSLSHVALPFPLSDSLYGRYPEPRNQYGISLGTFAARGERAVLVVGLDSLMRLSSNPFFPYMLKRIDDNIGPAPTK
>NZ_CP054160.1|WP_098928654.1|4692894_4693146_-|DinI-like-family-protein
MNIQIKVDNNLFDNLSEKAREALLDELQTRVHEVYPASHLTVIAGLNDKTEIVASDFFNDVEAKLTVQEIVDDVILHGHWRNA
>NZ_CP054160.1|WP_065686978.1|4693574_4694150_+|tyrosine-type-recombinase/integrase
MVQRKFLTLTEVRNLMSAARNTPTGVRDSCLILLAFRHGLRISELLRLRFRDLEMAEGRINIRRLKNGFSTVHPLMNDECEAIMEWKQHRAQWKPGADPDIIFISQRGTQLSRGQAWRIIRQAGELAGTVINTHPHMLRHACGYELAERGADTRLIQDYLGHRNIRHTVRYTASNAARFAGIWEAGKRKNG
>NZ_CP054160.1|WP_173409804.1|4694261_4694876_-|response-regulator-transcription-factor
MKKIMIMHPCIVTWHGLHQLFRRKLPDAEIVPAHSIYDLVFDDDLSDADLIVSELYGLNENITMGAKLLSFVQSVRQDKPLLIMTDVPGKQVLDCPGYLPGASYIALSEDIRQLVNQVDQVLAGKIVISPSLRCEQETSLSHVDARPFSRSEIKVYSLLQEGFSISQIAKKISRSVKTVSAHKRNMMGKLGIESEVELYACFNQ
>NZ_CP054160.1|WP_065686980.1|4694872_4695538_-|response-regulator-transcription-factor
MQQANHQQAEHATAESRKRILVVEPSRINWIGLQRLLGDAGSTELSFCRVSKLTDAKKKVYEFKPDVILFSSLSRGTDYLSLLSFLSDIASYHLKTNSVIWLQHDMAWMVQLLHAFGVDTVLIDPVNLCQITQCLGRDQTDKTPKNVALLGKQERLIALALLRGRSATAIANVTGKDVRTISTQKKSIIRKLQMTTNEELYLLAGRLVYLTRINGLSGETR
>NZ_CP054160.1|WP_173409805.1|4695604_4696522_-|fimbrial-protein
MKDLIRVFLKYLGAAALLIGYSSSAHAFACRTAAGATIPIGGGSANVFVTLSPQIGVGQNLIVDLSTQISCRNDYPDTRTDYVSLERGSAYGGVLENFTGSFVYDGSSYPFPTTSETKSVIYKSTTMTPWPAVLYLTPISTAGGVAITSGSLIAVLNMHQTNNVGDSYFFKWNIYTNNSVVIPTGGCDVSSRDVTVNLPEYPGTVSIPLTVRCAKNQNLAYYLTGPTTDAASTIFANTASAPVAQGVGIQVANPNGVLATNRNVALGVVGSSSVSLGLTANYARTTGQVVAGNVKAVVGVTFLYP
>NZ_CP054160.1|WP_161713853.1|4696535_4697036_-|type-1-fimbrial-protein
MSKLGPIAGWLLMMVLPLAHAADVNITINGKVVAKPCTVSTVSTTVELGDLYTFNLLAAGATSPWHSVTLNLTNCPVGTSKVTATFSGTADSTRNYYANQGAARNIALQLADSGGVNLPNGSTKVVAVNDASLAASLVLQVRAITPSGNVTQGSIQSLINVTYTYS
>NZ_CP054160.1|WP_065686982.1|4697057_4697585_-|type-1-fimbrial-protein
MRIQLYSLCLLALFSARVTQAADSTIAINGYVKDNACSIAPGSQSFVVDLMSNAAKQLHRVGATTPMVPFSIVLDKCGGSAIAVKTGFTGGADSDNLTLLKIDGGAGAAAGMGIQILDNNGNAIALNEISSGLNWSNITAGQSNTLYFYARLMATRAPVTAGQVRATANFTLEFQ
>NZ_CP054160.1|WP_173409806.1|4697607_4700247_-|fimbrial-biogenesis-usher-protein
MLYLKNGTESRRVINDNHQGAPILKLTLTPLALMLWALCGDASARAENYFNPRFLADDPAKVADLSGFEKGLEAPPGIYRVDIYMNDGFMSTRDVSFRADADNKALVPCLTRSQLATMGVNTRAVPGMAILASEACVPLTSLIKEASTDFDVGRQRLSISVPQAYMGNSARGYIPPDQWQNGITAGLLNYSFTGSNVRNSQSSNSNYAFLNLQSGVNLGAWRLRDNTTWSYTSGGGSSAKQNRWQHVNTYLQRDIALLRSRLTLGDGYTSGDVFDGVNFRGVQVATDDNMLPDSQRGYAPVIRGIARGTARVTVKQNGFEVYQTTVPPGPFTIDDLSGSGSGGDLQVSIQEADGTAQVFTVPYTSVPGLLRQGQVRYTVMVGQYRSGNDQQEKPTFGQGTMMWGLADGWTLSGGTQLADRYRAFNLGVAKNLGIFGAVSLDITQASATLPDDSTHQGQSLRFLYNKALNEWGTNLQLLGYRYSTSGYYALGDTTWRQMSGYKAATDEGIVELIPKLTDYYNLAYNKRGRLQMTVTQQVGDNGTFYLTGSHQTYWGIGKADEQLQAGYSGTLEDITYTLSYSLTKNAWQDGRDNMLAFNISIPFSHWLRSDSQSAFSRSSVSYSMSDDLSGRMTNQAGVYGTLLEDNNLSYNVQAGYAGGGTGTSGGTGNTSLNYRGASGNANVGYSRSSGTSQLYYGLSGGVLAHENGITLSQPLNDTLILVKAPGAGNVSVENQSGIRTDWRGYAVLPFAMDYRENRVALNPNTLANNVELDDAVVSVVPNHGAVVLADFKTHIGLKVLMTLTYNGQPLPFGSVVSFDNGRSGSIVADGGQVYLTGLPPSGEVKAKWGEGAGEQCVTSYQLPPESQQRALSYLTAVCR
>NZ_CP054160.1|WP_065686984.1|4701124_4701667_-|type-1-fimbrial-protein
MWRMGAGLLLTLLLAGKVVADDRWEEQPLGGLMRFQGEVIAETCSVEAGDRNLTVSMGNITTDRFRMPGDEADPVPFDLHLQNCTTAVSRNVGVMFHGMADSNNPQVLSVGEGPGVASGVAVALFDDRGRFIPLNTAPRYWVPLQEGPVILHFVAKYRATGQPVNNGLANAQAWFALTYQ
>NZ_CP054160.1|WP_065686985.1|4701745_4702294_-|fimbrial-protein
MKIKSLVAGIAAVLSLAGVANAATVTTVNGGPIHFKGEVVNAACAVDAGSIGQTVQLGQVKTTSLATAGDVSSATGFNIQLNDCDSTVATQAAVAFSGTAVNATYPTALALQGSAAGNASNVGVQILDRTGTALAVDGATFSAATTLADGTVIVPFQARYIATGVATAGIANADATFKVQYQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP054160_1	1.1\|1262935\|55\|NZ_CP054160\|CRISPRCasFinder	1262935-1262989	55	NZ_CP054160.1	1263034-1263088	1	0.982

1. spacer 1.1|1262935|55|NZ_CP054160|CRISPRCasFinder matches to position: 1263034-1263088, mismatch: 1, identity: 0.982

aaaaagataaggtattacgcagaataatcagcgaactcgatcggttccctctccc	CRISPR spacer
aaaaaggtaaggtattacgcagaataatcagcgaactcgatcggttccctctccc	Protospacer
******.************************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

660616 : 752858

Escherichia_phage(20.0%)

capsid,integrase,tRNA,tail,terminase,plate,holin

attL 681789:681804|attR 729728:729743

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024528176.1\|660616_661036_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_021180656.1\|661038_661344_-	DUF883 domain-containing protein	NA	NA	NA	NA
WP_024483094.1\|661507_661879_-	DUF1090 domain-containing protein	NA	NA	NA	NA
WP_173408639.1\|662091_662466_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA
WP_021180653.1\|662462_663137_-	DedA family protein	NA	NA	NA	NA
WP_024528179.1\|663336_663786_-	hypothetical protein	NA	NA	NA	NA
WP_024528180.1\|663973_664750_-	transcriptional regulator ExuR	NA	NA	NA	NA
WP_173408640.1\|666563_667976_+	glucuronate isomerase	NA	NA	NA	NA
WP_173408641.1\|667996_669487_+	altronate dehydratase	NA	NA	NA	NA
WP_173408642.1\|669563_670121_+	YgjV family protein	NA	NA	NA	NA
WP_173408643.1\|670241_671456_-	serine/threonine transporter SstT	NA	NA	NA	NA
WP_173408644.1\|671749_672487_-	glutamine amidotransferase	NA	NA	NA	NA
WP_173408645.1\|672488_673469_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_024528187.1\|673558_674065_-	M48 family metallopeptidase	NA	NA	NA	NA
WP_173408646.1\|675392_677414_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_098931810.1\|679395_681102_+	amidohydrolase	NA	NA	NA	NA
WP_024483079.1\|681405_682746_+	APC family permease	NA	NA	NA	NA
681789:681804	attL	NA	NA	NA	NA
WP_173408647.1\|682750_684250_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	4.9e-17	29.6
WP_024528194.1\|684370_685636_+	4-aminobutyrate--2-oxoglutarate transaminase	A0A1V0SKB7	Klosneuvirus	5.4e-25	27.6
WP_021180637.1\|685648_687103_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_161711735.1\|687969_688623_-	Qnr family pentapeptide repeat protein	NA	NA	NA	NA
WP_161711736.1\|688814_689459_+	thermostable hemolysin	NA	NA	NA	NA
WP_173408648.1\|689455_690895_+	long-chain fatty acid--CoA ligase	NA	NA	NA	NA
WP_161739844.1\|690891_691548_+	iron-containing redox enzyme family protein	NA	NA	NA	NA
WP_098929736.1\|691544_692354_+	SDR family oxidoreductase	A0A0K0KVL6	Prochlorococcus_phage	3.9e-05	28.7
WP_173408649.1\|692350_692962_+	hypothetical protein	NA	NA	NA	NA
WP_024528198.1\|695427_696885_+	EmmdR/YeeO family multidrug/toxin efflux MATE transporter	NA	NA	NA	NA
WP_173408650.1\|699755_701129_+	DUF3999 family protein	NA	NA	NA	NA
WP_173408651.1\|701492_702320_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_065684702.1\|702303_702756_+	hypothetical protein	NA	NA	NA	NA
WP_065684701.1\|703305_703695_+	hypothetical protein	NA	NA	NA	NA
WP_065684700.1\|704380_704932_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_024528218.1\|704995_705709_+	molecular chaperone	NA	NA	NA	NA
WP_173408652.1\|705683_705998_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_173408653.1\|705975_706254_+	hypothetical protein	NA	NA	NA	NA
WP_065684698.1\|706261_706969_+	molecular chaperone	NA	NA	NA	NA
WP_173408654.1\|706965_707727_+	molecular chaperone	NA	NA	NA	NA
WP_173410105.1\|710668_711517_+	adhesin	NA	NA	NA	NA
WP_173410106.1\|711828_712677_+	adhesin	NA	NA	NA	NA
WP_173408655.1\|712945_713425_-	hypothetical protein	NA	NA	NA	NA
WP_173408656.1\|713421_714450_-\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	1.1e-116	62.4
WP_173408657.1\|714499_715285_-	hypothetical protein	M1PL51	Streptococcus_phage	5.9e-06	22.4
WP_071682591.1\|715286_715871_-	phage repressor protein CI	F1BUS8	Erwinia_phage	1.4e-31	39.7
WP_071682590.1\|715988_716210_+	regulator	NA	NA	NA	NA
WP_173408658.1\|716762_716933_+	hypothetical protein	NA	NA	NA	NA
WP_173408659.1\|716929_717430_+	replication protein B	A0A0F7LBQ6	Escherichia_phage	2.0e-60	63.9
WP_173408660.1\|717494_717767_+	DUF2732 family protein	NA	NA	NA	NA
WP_071682586.1\|717769_717994_+	TraR/DksA C4-type zinc finger protein	Q9ZXI6	Pseudomonas_virus	3.1e-08	41.9
WP_173408661.1\|718116_718389_+	DUF5405 family protein	A0A0M4R2Q0	Salmonella_phage	1.0e-21	52.2
WP_173408662.1\|718385_719108_+	Dcm methylase	A0A1V0E7C5	Klebsiella_phage	1.5e-77	60.8
WP_173408663.1\|719104_721408_+	replication endonuclease	A0A0F7LBQ2	Escherichia_phage	5.2e-260	59.1
WP_173408476.1\|721493_721676_+	hypothetical protein	NA	NA	NA	NA
WP_173408664.1\|722177_723296_+	ParB N-terminal domain-containing protein	Q858T2	Yersinia_virus	1.1e-26	29.4
WP_173408665.1\|723308_724322_+	hypothetical protein	NA	NA	NA	NA
WP_173408666.1\|728602_729448_+\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	4.4e-108	70.5
WP_173408667.1\|729509_730691_+\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	2.6e-154	76.9
729728:729743	attR	NA	NA	NA	NA
WP_173408668.1\|730694_731441_+\|terminase	terminase	Q6K1I5	Salmonella_virus	2.1e-69	63.2
WP_173408669.1\|732040_732244_+\|tail	tail protein X	U5N3E7	Enterobacteria_phage	8.3e-21	71.6
WP_173408670.1\|732246_732456_+	hypothetical protein	B6SD15	Bacteriophage	5.0e-05	46.4
WP_173408671.1\|732439_732949_+	lysozyme	A0A218M4K3	Erwinia_phage	1.9e-61	71.9
WP_173408672.1\|732945_733218_+	hypothetical protein	NA	NA	NA	NA
WP_173408673.1\|733214_733505_+\|holin	holin	S4TNY4	Salmonella_phage	7.2e-26	63.5
WP_173408674.1\|733467_733935_+\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	2.0e-62	74.8
WP_173408675.1\|733927_734377_+	phage virion morphogenesis protein	O80313	Escherichia_phage	1.6e-48	72.6
WP_173408676.1\|734448_735090_+\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	2.2e-83	71.8
WP_173408677.1\|735086_735434_+	GPW/gp25 family protein	F1BUP4	Erwinia_phage	2.5e-41	71.9
WP_173408678.1\|736339_736867_+\|tail	phage tail protein I	Q858V5	Yersinia_virus	1.5e-74	73.4
WP_173408679.1\|739162_739588_+\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	2.9e-23	43.5
WP_173408680.1\|739869_741039_+\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	1.6e-188	82.1
WP_141132051.1\|741053_741575_+\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	2.2e-73	77.3
WP_074031002.1\|741637_741934_+\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	1.3e-27	78.8
WP_071680395.1\|741948_742086_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	3.5e-15	80.0
WP_173408681.1\|742078_744526_+\|tail	phage tail tape measure protein	U5N0T4	Enterobacteria_phage	2.2e-155	45.8
WP_173408682.1\|745023_746199_+	phage late control D family protein	Q6K1G4	Salmonella_virus	3.1e-160	73.7
WP_071682894.1\|746270_746489_+	DNA-binding transcriptional regulator	A0A2I8TV89	Erwinia_phage	3.6e-22	63.9
WP_024528265.1\|746884_747373_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_024528266.1\|747422_749261_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.9e-34	33.3
WP_021179484.1\|749418_751167_-	DNA primase	A0A0K1LMQ9	Caulobacter_phage	8.7e-74	38.4
WP_001144069.1\|751304_751520_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_065684694.1\|751844_752858_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	7.4e-110	58.9

DBSCAN-SWA_2

1328031 : 1343715

Cronobacter_phage(36.36%)

tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021807641.1\|1328031_1328397_+	phage antitermination protein Q	B6SCY2	Bacteriophage	4.6e-30	55.0
WP_173408848.1\|1328683_1329088_+	hypothetical protein	NA	NA	NA	NA
WP_065686661.1\|1329191_1329854_+\|tail	phage tail protein	I6PBN6	Cronobacter_phage	6.8e-72	63.1
WP_143182220.1\|1329927_1330281_+	hypothetical protein	G8C7Q5	Escherichia_phage	2.7e-27	52.6
WP_081375768.1\|1330277_1330583_+	DUF1799 domain-containing protein	I6PD79	Cronobacter_phage	2.4e-19	65.6
WP_173408849.1\|1331934_1332093_+	hypothetical protein	NA	NA	NA	NA
WP_024486957.1\|1332376_1332718_+\|tail	phage tail protein	A0A0S2SYI2	Pseudomonas_phage	1.5e-14	40.2
WP_059201583.1\|1332726_1333479_+\|tail	phage minor tail protein L	K7PGX3	Enterobacteria_phage	1.3e-87	57.4
WP_065686658.1\|1333481_1334192_+	C40 family peptidase	M9NZD8	Enterobacteria_phage	3.9e-81	55.7
WP_173408850.1\|1334188_1334842_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	1.1e-45	49.3
WP_173408851.1\|1334900_1340579_+	DUF1983 domain-containing protein	F1C571	Cronobacter_phage	7.2e-287	54.7
WP_173408852.1\|1340620_1342303_+	hypothetical protein	J9Q6E3	Salmonella_phage	2.2e-26	46.6
WP_024530943.1\|1342977_1343715_-	class I SAM-dependent methyltransferase	A0A1X9I6N4	Streptococcus_phage	1.9e-54	43.6

DBSCAN-SWA_3

2328423 : 2338463

Enterobacteria_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173410153.1\|2328423_2329959_-	PD-(D/E)XK nuclease-like domain-containing protein	K7P6V4	Enterobacteria_phage	5.0e-134	59.9
WP_173409103.1\|2331576_2331801_-	hypothetical protein	Q24LE4	Clostridium_phage	1.6e-09	42.5
WP_173409104.1\|2332213_2332705_-	hypothetical protein	NA	NA	NA	NA
WP_173409105.1\|2332953_2333340_-	helix-turn-helix transcriptional regulator	K7PM35	Enterobacteria_phage	9.0e-32	54.0
WP_173409106.1\|2333442_2333685_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	8.1e-23	64.9
WP_173409107.1\|2333695_2334157_+	hypothetical protein	H9C162	Pectobacterium_phage	1.6e-19	42.9
WP_173409108.1\|2334172_2334412_+	hypothetical protein	NA	NA	NA	NA
WP_173409109.1\|2334417_2335530_+	hypothetical protein	A0A0U2RT81	Escherichia_phage	1.2e-23	44.7
WP_173409110.1\|2335492_2336017_+	replication protein	A0A0U2JGJ0	Escherichia_phage	1.2e-39	48.6
WP_173409111.1\|2336032_2336437_+	hypothetical protein	NA	NA	NA	NA
WP_173409112.1\|2336429_2336753_+	hypothetical protein	NA	NA	NA	NA
WP_173409113.1\|2337971_2338463_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.1e-69	78.6

DBSCAN-SWA_4

2346738 : 2365646

Escherichia_phage(94.12%)

plate,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173409125.1\|2346738_2348061_+\|terminase	terminase	A0A0U2JTW9	Escherichia_phage	2.7e-184	68.2
WP_173410154.1\|2349446_2350259_+	hypothetical protein	A0A0U2I1R8	Escherichia_phage	1.6e-110	70.0
WP_173410155.1\|2350224_2351547_+	NUDIX hydrolase	A0A0U2QW61	Escherichia_phage	5.7e-94	60.5
WP_173409126.1\|2351546_2352143_+	hypothetical protein	A0A0U2S600	Escherichia_phage	1.0e-42	48.0
WP_173409127.1\|2353253_2353721_+	hypothetical protein	NA	NA	NA	NA
WP_173410156.1\|2353723_2354176_+	hypothetical protein	A0A0U2S646	Escherichia_phage	1.2e-38	52.0
WP_173409128.1\|2354172_2354607_+	hypothetical protein	A0A0U2RTA8	Escherichia_phage	2.6e-40	57.1
WP_173409129.1\|2354593_2355535_+	hypothetical protein	A0A0U2SH76	Escherichia_phage	3.1e-94	54.9
WP_173409130.1\|2355534_2356617_+	hypothetical protein	A0A0U2KD19	Escherichia_phage	1.4e-98	47.2
WP_173409131.1\|2356632_2357073_+	hypothetical protein	A0A0U2S616	Escherichia_phage	1.2e-37	48.6
WP_173409132.1\|2357075_2357480_+	hypothetical protein	A0A0U2S634	Escherichia_phage	6.9e-35	49.6
WP_173409133.1\|2357750_2359721_+	glycoside hydrolase family 104 protein	H9C1A7	Pectobacterium_phage	1.3e-41	53.0
WP_173409134.1\|2359731_2360397_+	hypothetical protein	A0A0U2JGI7	Escherichia_phage	4.3e-58	53.2
WP_173409135.1\|2360659_2361673_+	hypothetical protein	A0A0U2QL72	Escherichia_phage	1.1e-60	39.3
WP_173409136.1\|2361672_2362365_+\|plate	phage baseplate protein	A0A0U2JTX5	Escherichia_phage	7.9e-47	43.2
WP_173409137.1\|2362361_2362706_+	hypothetical protein	A0A0U2I1S2	Escherichia_phage	6.5e-42	72.2
WP_173409138.1\|2363143_2363539_-	hypothetical protein	NA	NA	NA	NA
WP_173409139.1\|2363644_2364871_+\|plate	baseplate J/gp47 family protein	A0A0U2RJZ0	Escherichia_phage	2.7e-122	55.2
WP_173409140.1\|2364854_2365646_+	Ig-like domain-containing protein	A0A0U2RK03	Escherichia_phage	1.6e-72	57.6

DBSCAN-SWA_5

3144153 : 3225148

Escherichia_phage(28.95%)

coat,capsid,integrase,tRNA,tail,terminase,protease,lysis,head,plate

attL 3154940:3154959|attR 3188408:3188427

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021804595.1\|3144153_3145137_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	7.6e-35	38.5
WP_173409375.1\|3145350_3145545_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_004963673.1\|3145516_3145873_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_024485856.1\|3145915_3146113_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_071683678.1\|3146210_3146762_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	1.2e-16	33.7
WP_021178149.1\|3146765_3148694_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	1.1e-130	37.7
WP_173409376.1\|3148998_3149577_+	DUF2239 family protein	NA	NA	NA	NA
WP_065686075.1\|3151815_3153099_-	HAAAP family serine/threonine permease	NA	NA	NA	NA
3154940:3154959	attL	NA	NA	NA	NA
WP_071683683.1\|3155064_3155283_-	DNA-binding transcriptional regulator	S4TNZ3	Salmonella_phage	1.8e-21	65.3
WP_074031003.1\|3159473_3159611_-\|tail	GpE family phage tail protein	O80316	Escherichia_phage	3.9e-14	80.0
WP_173409377.1\|3159625_3159922_-\|tail	phage tail assembly protein	A0A0F7LDQ8	Escherichia_phage	2.3e-27	78.8
WP_141132051.1\|3159983_3160505_-\|tail	phage major tail tube protein	S4TNZ0	Salmonella_phage	2.2e-73	77.3
WP_173409378.1\|3160519_3161689_-\|tail	phage tail sheath protein	S4TRX2	Salmonella_phage	4.6e-188	81.9
WP_173409379.1\|3161970_3162396_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	1.3e-23	44.4
WP_173409380.1\|3162398_3163424_-	hypothetical protein	F1BUK3	Cronobacter_phage	3.6e-19	43.1
WP_173409381.1\|3163413_3164646_-\|tail	phage tail protein	Q858V4	Yersinia_virus	1.0e-60	55.5
WP_173409382.1\|3164659_3165187_-\|tail	phage tail protein I	Q858V5	Yersinia_virus	4.0e-75	73.4
WP_173409383.1\|3165179_3166088_-\|plate	baseplate assembly protein	A0A0F7LCJ3	Escherichia_phage	6.6e-126	77.2
WP_173409384.1\|3166093_3166441_-	GPW/gp25 family protein	F1BUP4	Erwinia_phage	1.9e-41	71.9
WP_173409385.1\|3166437_3167079_-\|plate	phage baseplate assembly protein V	A0A0M4S6F6	Salmonella_phage	4.4e-84	73.7
WP_161712040.1\|3167237_3168038_+	hypothetical protein	NA	NA	NA	NA
WP_173409386.1\|3168134_3168584_-	phage virion morphogenesis protein	O80313	Escherichia_phage	6.7e-47	67.8
WP_173409387.1\|3168726_3169662_-	hypothetical protein	NA	NA	NA	NA
WP_173409388.1\|3169717_3170185_-\|tail	phage tail protein	A0A0F7LA33	Escherichia_phage	2.0e-62	76.8
WP_173409389.1\|3170265_3170706_-\|lysis	LysB family phage lysis regulatory protein	O80310	Escherichia_phage	6.2e-21	46.0
WP_173409390.1\|3170702_3171212_-	lysozyme	A0A218M4K3	Erwinia_phage	4.2e-61	71.9
WP_173409391.1\|3171195_3171405_-	hypothetical protein	B6SD15	Bacteriophage	5.0e-05	46.4
WP_141132037.1\|3171407_3171611_-\|tail	tail protein X	U5N3E7	Enterobacteria_phage	5.4e-20	68.7
WP_173409392.1\|3171610_3172117_-\|head	head completion/stabilization protein	S4TNY1	Salmonella_phage	7.1e-61	70.8
WP_173409393.1\|3172205_3172955_-\|terminase	terminase	O80305	Escherichia_phage	2.5e-62	65.5
WP_173409394.1\|3172958_3174110_-\|capsid	phage major capsid protein, P2 family	Q778Y7	Enterobacteria_phage	1.2e-151	76.0
WP_173409395.1\|3174172_3175018_-\|capsid	GPO family capsid scaffolding protein	Q01088	Escherichia_phage	7.5e-108	70.5
WP_173409396.1\|3175181_3176954_+\|terminase	terminase ATPase subunit family protein	A0A218M4M1	Erwinia_phage	3.8e-287	81.5
WP_173409397.1\|3178190_3178907_+	HNH endonuclease	NA	NA	NA	NA
WP_173409398.1\|3179549_3181337_+	AAA family ATPase	NA	NA	NA	NA
WP_173410190.1\|3181332_3181740_+	AAA family ATPase	NA	NA	NA	NA
WP_173409399.1\|3182106_3184521_-	replication endonuclease	Q858T4	Yersinia_virus	4.6e-267	60.3
WP_173409400.1\|3185125_3185398_-	DUF5405 family protein	A0A0M4R2Q0	Salmonella_phage	1.1e-20	48.9
WP_173409401.1\|3185520_3185775_-	DUF2732 family protein	NA	NA	NA	NA
WP_039995117.1\|3185838_3186339_-	hypothetical protein	M1SV55	Escherichia_phage	2.1e-65	68.7
WP_173408479.1\|3186335_3186506_-	hypothetical protein	NA	NA	NA	NA
WP_021178192.1\|3186520_3186805_-	hypothetical protein	Q1JS60	Enterobacteria_phage	5.9e-33	71.1
WP_039995119.1\|3186930_3187230_+	helix-turn-helix transcriptional regulator	Q1JS61	Enterobacteria_phage	1.0e-38	78.8
WP_021178193.1\|3187317_3188301_+\|integrase	tyrosine-type recombinase/integrase	Q83VS6	Escherichia_phage	2.0e-112	60.2
WP_173409402.1\|3188437_3189772_-	cytochrome c	NA	NA	NA	NA
3188408:3188427	attR	NA	NA	NA	NA
WP_098931364.1\|3189783_3191568_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_173409403.1\|3191570_3192296_-	gluconate 2-dehydrogenase subunit 3 family protein	NA	NA	NA	NA
WP_021178197.1\|3192602_3193265_-	transglycosylase SLT domain-containing protein	I6ZXX9	Escherichia_phage	5.0e-06	34.3
WP_024486844.1\|3193374_3193674_+	type V toxin-antitoxin system endoribonuclease antitoxin GhoS	NA	NA	NA	NA
WP_173410191.1\|3193869_3194742_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_065685992.1\|3194738_3195629_+	manganese/iron ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.8e-11	28.3
WP_024486841.1\|3195628_3196492_+	metal ABC transporter permease	NA	NA	NA	NA
WP_024530033.1\|3196491_3197352_+	metal ABC transporter permease	NA	NA	NA	NA
WP_173410192.1\|3197804_3198590_+	fructosamine kinase family protein	NA	NA	NA	NA
WP_065685989.1\|3198678_3199239_-	YniB family protein	NA	NA	NA	NA
WP_065685988.1\|3199453_3200119_+	hexitol phosphatase HxpB	NA	NA	NA	NA
WP_173409404.1\|3200331_3201093_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	Q06VL0	Trichoplusia_ni_ascovirus	5.7e-14	29.0
WP_024530036.1\|3201314_3201863_+	metal-dependent hydrolase	A0A127AVX7	Bacillus_phage	3.7e-07	33.1
WP_065685986.1\|3202047_3203439_+	L-cystine transporter	NA	NA	NA	NA
WP_173410193.1\|3203555_3204476_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_173410194.1\|3204561_3205437_+	SDR family NAD(P)-dependent oxidoreductase	Q06VL0	Trichoplusia_ni_ascovirus	3.5e-15	30.4
WP_173409405.1\|3205429_3206323_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA
WP_021178210.1\|3206421_3207213_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA
WP_173409406.1\|3207442_3208834_+	MFS transporter	NA	NA	NA	NA
WP_021178212.1\|3208921_3209800_-\|protease	protease HtpX	NA	NA	NA	NA
WP_173409407.1\|3210066_3212115_-	carboxy terminal-processing peptidase	A0A0R6PIZ1	Moraxella_phage	8.3e-84	34.4
WP_173409408.1\|3212134_3212848_-	RNA chaperone ProQ	NA	NA	NA	NA
WP_021178215.1\|3212943_3213441_-	GAF domain-containing protein	NA	NA	NA	NA
WP_098931999.1\|3213681_3214929_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA
WP_173409409.1\|3217719_3219156_+	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA
WP_173410195.1\|3219159_3220131_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_065685975.1\|3222668_3223466_-	molecular chaperone	NA	NA	NA	NA
WP_065685974.1\|3223484_3224009_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_065685973.1\|3224020_3224539_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_173409410.1\|3224602_3225148_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_6

5581928 : 5628436

Caulobacter_phage(28.57%)

transposase,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173410010.1\|5581928_5582864_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_173410011.1\|5583286_5584687_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_098929201.1\|5587219_5587969_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_065683532.1\|5588006_5588243_-	DUF4282 domain-containing protein	NA	NA	NA	NA
WP_098929203.1\|5588435_5588663_-	sulfurtransferase TusA family protein	NA	NA	NA	NA
WP_173410012.1\|5588668_5589703_-	YeeE/YedE family protein	NA	NA	NA	NA
WP_173410013.1\|5589967_5590660_+	HAD family hydrolase	NA	NA	NA	NA
WP_173410014.1\|5590880_5592125_-	VWA domain-containing protein	NA	NA	NA	NA
WP_021807716.1\|5592340_5592916_-	TerD family protein	K4JRX3	Caulobacter_phage	2.1e-29	40.1
WP_071681669.1\|5592988_5593567_-	tellurium resistance membrane protein TerD	A0A2P1N0L4	Streptomyces_phage	1.5e-06	42.1
WP_021807714.1\|5593624_5594668_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	8.5e-77	47.7
WP_065683517.1\|5594691_5595147_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_065683516.1\|5595170_5596337_-	TerD family protein	NA	NA	NA	NA
WP_065683515.1\|5596336_5596924_-	TerD family protein	K4JRX3	Caulobacter_phage	6.8e-15	29.0
WP_173410015.1\|5597248_5598313_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_065683514.1\|5598316_5599447_+	phosphoribosyltransferase domain-containing protein	A0A172Q0Y1	Acinetobacter_phage	1.2e-28	26.0
WP_173410016.1\|5599439_5600213_+	hypothetical protein	NA	NA	NA	NA
WP_098929213.1\|5600214_5601294_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	4.6e-41	35.7
WP_065683511.1\|5601293_5602250_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_173410017.1\|5602252_5602726_+	tellurium resistance protein TerW	NA	NA	NA	NA
WP_173408560.1\|5602821_5603976_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_161738803.1\|5604530_5605010_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_161738804.1\|5605050_5605377_-	DUF2645 family protein	NA	NA	NA	NA
WP_161738805.1\|5605379_5606087_-	hypothetical protein	NA	NA	NA	NA
WP_021807361.1\|5606564_5607203_+	VWA domain-containing protein	NA	NA	NA	NA
WP_173410018.1\|5607223_5607868_+	TerD family protein	NA	NA	NA	NA
WP_161738807.1\|5607864_5608503_+	VWA domain-containing protein	NA	NA	NA	NA
WP_173410019.1\|5609640_5611242_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_173410020.1\|5611272_5612772_+	kinase	NA	NA	NA	NA
WP_065683504.1\|5612873_5613470_-	response regulator transcription factor	NA	NA	NA	NA
WP_173410021.1\|5613526_5613808_-	hypothetical protein	NA	NA	NA	NA
WP_065683502.1\|5614580_5615129_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_098929226.1\|5615173_5615899_+	molecular chaperone	NA	NA	NA	NA
WP_173410022.1\|5615873_5616434_+	type 1 fimbrial protein	NA	NA	NA	NA
WP_173410023.1\|5616441_5617161_+	molecular chaperone	NA	NA	NA	NA
WP_161738817.1\|5617157_5617886_+	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_071682755.1\|5622694_5622958_+	PAAR domain-containing protein	E5E3Y0	Burkholderia_phage	1.6e-11	46.5
WP_173410024.1\|5623048_5624509_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_173410025.1\|5624533_5625718_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_173410026.1\|5625683_5625923_+	hypothetical protein	NA	NA	NA	NA
WP_173410027.1\|5625888_5626278_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_173410028.1\|5627320_5628436_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP054160

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection