CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP054144	Deefgea sp. D17 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP054143	Deefgea sp. D17 chromosome, complete genome	2 crisprs	DEDDh,DinG,csa3,cas3,cas9,cas1,cas2	3	16	5
NZ_CP054145	Deefgea sp. D17 plasmid unnamed2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054143_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054143_1

1662553-1662750

Orphan

Consensus_repeat	Method
GCGACACCAACNGCGACG	CRT

4 spacers

The CRISPR arrays of NZ_CP054143_1

>merge|NZ_CP054143|1|1662553-1662750|CRT
GCGACACCAACTGCGACGCCGACAGCGACACCAACTGCGACGCCGACAGCGACACCAACTGCGACGCCGACAGCGACACCAACTGCGACACCAACTGCGACGCCAACCGCGACGCCAACTGCGACGCCAACTGCGACGCCGACAGCGACACCAACAGCGACGCCAACTGCGACCCCGACAGCAACACCATCGGCAACG

>NZ_CP054143|1|1|1662553-1662750|CRT
GCGACACCAACTGCGACG	CCGACAGCGACACCAACTGCGACGCCGACA
GCGACACCAACTGCGACG	CCGACAGCGACACCAACT
GCGACACCAACTGCGACG	CCAACCGCGACGCCAACTGCGACGCCAACTGCGACGCCGACA
GCGACACCAACAGCGACG	CCAACTGCGACCCCGACA
GCAACACCATCGGCAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054143.1\|WP_173533154.1\|1666369_1666996_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP054143.1\|WP_173533150.1\|1659593_1660697_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP054143.1\|WP_173533144.1\|1652777_1654034_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP054143.1\|WP_173533155.1\|1667185_1668265_-\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_CP054143.1\|WP_173533146.1\|1655629_1656718_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP054143.1\|WP_173533148.1\|1657640_1658417_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP054143.1\|WP_173533142.1\|1650453_1651410_+\|lipopolysaccharide-heptosyltransferase-I	unknown	unknown	gnl\|CDD\|274025
NZ_CP054143.1\|WP_173533161.1\|1674294_1674900_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225482
NZ_CP054143.1\|WP_173533151.1\|1660800_1661394_-\|6-carboxytetrahydropterin-synthase	unknown	unknown	gnl\|CDD\|376501
NZ_CP054143.1\|WP_173533145.1\|1654046_1655408_-\|HD-GYP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225116
NZ_CP054143.1\|WP_173533147.1\|1656721_1657651_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP054143.1\|WP_173533156.1\|1668395_1669682_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|274368
NZ_CP054143.1\|WP_173533160.1\|1672693_1674205_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	unknown	unknown	gnl\|CDD\|235310
NZ_CP054143.1\|WP_173533143.1\|1651458_1652781_-\|deoxyguanosinetriphosphate-triphosphohydrolase	unknown	unknown	gnl\|CDD\|234897
NZ_CP054143.1\|WP_173533157.1\|1669765_1670452_-\|phosphate-regulon-transcriptional-regulator-PhoB	unknown	unknown	gnl\|CDD\|131209
NZ_CP054143.1\|WP_173533153.1\|1664992_1666111_-\|chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054143.1\|WP_173533159.1\|1672097_1672637_+\|sterol-binding-protein	unknown	unknown	gnl\|CDD\|225706
NZ_CP054143.1\|WP_173533158.1\|1671264_1672008_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	unknown	unknown	gnl\|CDD\|234689
NZ_CP054143.1\|WP_173533149.1\|1658484_1659543_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_CP054143.1\|WP_173534643.1\|1670798_1671155_+\|DUF971-domain-containing-protein	unknown	unknown	gnl\|CDD\|226066

Protein	Function_ID	Function_description	E-value
NZ_CP054143.1\|WP_173533154.1\|1666369_1666996_-\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	2.05002e-25
NZ_CP054143.1\|WP_173533150.1\|1659593_1660697_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	2.62711e-06
NZ_CP054143.1\|WP_173533144.1\|1652777_1654034_-\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	2.99076e-98
NZ_CP054143.1\|WP_173533155.1\|1667185_1668265_-\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_CP054143.1\|WP_173533146.1\|1655629_1656718_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	4.11263e-164
NZ_CP054143.1\|WP_173533148.1\|1657640_1658417_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	9.03822e-84
NZ_CP054143.1\|WP_173533142.1\|1650453_1651410_+\|lipopolysaccharide-heptosyltransferase-I	gnl\|CDD\|274025	TIGR02193, LIPOPOLYSACCHARIDE_HEPTOSYLTRANSFERASE-1, lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	2.22012e-90
NZ_CP054143.1\|WP_173533161.1\|1674294_1674900_+\|hypothetical-protein	gnl\|CDD\|225482	COG2930, COG2930, Uncharacterized conserved protein [Function unknown].	0.000295921
NZ_CP054143.1\|WP_173533151.1\|1660800_1661394_-\|6-carboxytetrahydropterin-synthase	gnl\|CDD\|376501	pfam01242, PTPS, 6-pyruvoyl tetrahydropterin synthase. 6-Pyruvoyl tetrahydrobiopterin synthase catalyzes the conversion of dihydroneopterin triphosphate to 6-pyruvoyl tetrahydropterin, the second of three enzymatic steps in the synthesis of tetrahydrobiopterin from GTP. The functional enzyme is a hexamer of identical subunits.	6.94718e-26
NZ_CP054143.1\|WP_173533145.1\|1654046_1655408_-\|HD-GYP-domain-containing-protein	gnl\|CDD\|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.28119e-59
NZ_CP054143.1\|WP_173533147.1\|1656721_1657651_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	7.70895e-98
NZ_CP054143.1\|WP_173533156.1\|1668395_1669682_-\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	2.08227e-168
NZ_CP054143.1\|WP_173533160.1\|1672693_1674205_+\|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB	gnl\|CDD\|235310	PRK04750, ubiB, putative ubiquinone biosynthesis protein UbiB; Reviewed.	0
NZ_CP054143.1\|WP_173533143.1\|1651458_1652781_-\|deoxyguanosinetriphosphate-triphosphohydrolase	gnl\|CDD\|234897	PRK01096, PRK01096, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional.	0
NZ_CP054143.1\|WP_173533157.1\|1669765_1670452_-\|phosphate-regulon-transcriptional-regulator-PhoB	gnl\|CDD\|131209	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB. PhoB is a DNA-binding response regulator protein acting with PhoR in a 2-component system responding to phosphate ion. PhoB acts as a positive regulator of gene expression for phosphate-related genes such as phoA, phoS, phoE and ugpAB as well as itself. It is often found proximal to genes for the high-affinity phosphate ABC transporter (pstSCAB; GenProp0190) and presumably regulates these as well. [Regulatory functions, DNA interactions, Signal transduction, Two-component systems].	4.99932e-131
NZ_CP054143.1\|WP_173533153.1\|1664992_1666111_-\|chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.09678e-50
NZ_CP054143.1\|WP_173533159.1\|1672097_1672637_+\|sterol-binding-protein	gnl\|CDD\|225706	COG3165, COG3165, Uncharacterized protein conserved in bacteria [Function unknown].	2.04801e-23
NZ_CP054143.1\|WP_173533158.1\|1671264_1672008_+\|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE	gnl\|CDD\|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	9.87836e-138
NZ_CP054143.1\|WP_173533149.1\|1658484_1659543_+\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.78453e-122
NZ_CP054143.1\|WP_173534643.1\|1670798_1671155_+\|DUF971-domain-containing-protein	gnl\|CDD\|226066	COG3536, COG3536, Uncharacterized protein conserved in bacteria [Function unknown].	7.62432e-54

>NZ_CP054143.1|WP_173533151.1|1660800_1661394_-|6-carboxytetrahydropterin-synthase
MLIRKLFKFENAHIVRNCSSERCRTSIHGHSYKVEVLLEADALDNGQMIYDFGLMKGTIRDVIDAFDHAICFWDKDDAEYIRLCQTFSARWISMPVSPSAEQFARVFFVIIDQLLQQTMMANGESDVRLHSIIAHETETGYAQAFRHDAYNPRMGEIKLSDVIFSAQCQSEWHDPQMYEKLLAGAQFQNPVIPQQIK
>NZ_CP054143.1|WP_173533150.1|1659593_1660697_+|VanZ-family-protein
MSSISSIRYLAKKTKPTMVSPFLFAVSLLLILIVSLYPFSGWRFTGEPITAFYTYPLPYYFTVFDNAINILAYIPLGLSAVLILRRYRLAFLYATCICLLVSMSIEFVQQFLPSRVASNMDMISNVLGGGIGAIAGVVLSHRYFLQYWLHFRHDYLAPSAVVEWGFIWLALWFVTQFDPSLPFLGVVVMPQGLPQPFVSPIQSPALFLRLLEGGGMMLHLLAVALFVSLLVRYHRYAPRAIASVLMCALLVKMGFAGMLLQPEQFFAWINLNIALGGIVGVVLLAFFLRLNRRLRAWAGFFALCLINIITYLWPLSPNSSNNLDGYKWSYGHLQHFNGMSSAIGDIWPIGAMLFLFYFMLFLPEDNE
>NZ_CP054143.1|WP_173533149.1|1658484_1659543_+|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MKKLFLALMLAAGVAQAEDVLHIYNWNNYLAPETVKRFEASCKCRVVQDYYGAMEEMLAKLSAGAKGYDIVVPTGFAIPPLSKQNLLQGLDLAKLPNAKNINPAFMNSKFDPGNKYSLPYSFTTTLLGYNQNKLKELGISADSWSLIFDPVILAKIKGKVTVLDDSREVFAAALMYNGFSANSTNPDELKKAQETIIKAKPYWAAFNGQSYIKELTVGNIWVAHGYSSDMFQAVADAKAAKRSFTVNYGLQKEGNTMSVDSMVVLKNAPRPDLAYKFMNFILEGKNAADLTNLIGVGNPNLAAVPFVKADIKSIPSVFPDAQVMKKLQQLNALEGKQLRELNKLWTKVKTSK
>NZ_CP054143.1|WP_173533148.1|1657640_1658417_+|ABC-transporter-permease
MHSKQSKWLWAAAIFVYGFLYVPLIIVVAYSFNDSKLNAEWVGFTFKWYGLLIHNEQMLVAARNSLIIAVVTSCCATVLGTLAGLAMHKYKLRVLPILVLTPIAIPEILMGVALLIFFVMLNMTLGMVSVTLAHIAFCIGFVAIVVRSRLQGMDEALVEAARDLGASPIQAFRLVTMPLIMPGIIAGALMAFTLSIDDFVITFFTAGAGASTLPLQIYSMIRIAVTPEVNAISTLLMLLTLTLILIASKVAPSALRAK
>NZ_CP054143.1|WP_173533147.1|1656721_1657651_+|ABC-transporter-permease
MAKNKSLGRWLISGPPLLYLLIFFAIPTLIMALAAFRFPGDYGGLLPLIDINPDTGKNELLIHAGNWQEYLTFENFSRFFEDSIYVELFIKSFWYAGITTFVCLLMAYPLAWLIARSPKKYRDLLILLVILPFWSNFLIRVYAWMIILGPQGYFAMTINQGLAWLGIAPIQLMYSHFAVIVVLVYVHLPFMVLPLYANLEKHDVALLDAAQDLGASGWQRFWKITWPLSLPGVWAGSALVFIPALGMFAVPDLLGGTDGMMIGNLIKQQFLDSRDWPFGSVLSIMLTLAVLMMAGLGMLIGRGKQRNAL
>NZ_CP054143.1|WP_173533146.1|1655629_1656718_+|ABC-transporter-ATP-binding-protein
MALLEIRDVVKQFGDFTAVNHVSLSVEAGEFFTLLGPSGCGKTTLLRMLAGFEQPDSGEIILDGVNVAGVPPEKRPVHTVFQNYALFPHMTVAQNIAFPLKMANVPSEELKQRVAEVLEDVQLTPFAQRFPHEMSGGQRQRVAIARALVNRPRLLLLDEPLSALDAKLREEMQIELINLQKEVGITFVYVTHDQGEALALSHRIAVMNKGQVAQLDVPEVIYSHPKSRFVADFIGQCNLLDGTIVAIGHDRMQVEIAGVGIAETLLLPDVEVGQKGTLTLRPEKIKLAASLPLDVADEVHFKGKVHDCLYLGDVTIYVIELENGVLVETMLPNSAPGRAKFFDDNDLVELAWRYDAGHFILS
>NZ_CP054143.1|WP_173533145.1|1654046_1655408_-|HD-GYP-domain-containing-protein
MEIRIPVVKLQLGQFVSELDRPWLDTPFLMQGFLIESRQQIELLHIHCEHITLDLNRSVGGIAQWTSLLTTTDQIESSRYQPHNPPTSDKAAAEQSHDRLNILRELRRLFSNWRQQSATSSNTPSALSTDIVIYDDTAAVEQEIKTASNSHQTAQRLVLSLMEAVRQDLQPRVEEINEVVSDLVGSIIRNPNALLWLTQLKDRDQYTYAHSIDSAVYLLAFGRHLGYPRAELQNLGMAGLMLDVGKMRLPPELLTRTGRYTPGEFMLMKTHVNHSLDILSQMEGIPIDVFDMVARHHERYDGSGYPLGLKAERIGMFASMAGIVDCFTALTSDRSYSNAKSAHEALQLMYKWSERYFHPALIEQFSQCVGIFHVGTLVELSTGEVGIVIGQNRVRRLKPKLLIILGPDKHPYAKPHTLDLITNPSLPSGLPINIRRELPRGAHQIDPREFFLE
>NZ_CP054143.1|WP_173533144.1|1652777_1654034_-|EAL-domain-containing-protein
MPATAFAHDLNEIEIRHIERLTTALSHTHSGRYCGVLHIEVRHRPHRPKQSAVVTQMANALRCLLRENDQLFHIDHQTLGLLIPNIAGISHALLAANRAQYLLCEAPETPQHLHPHIGIAIYPEHGENMPDLLNSARIAARDFTQDQIGVYDPSRDWLGQQLARLEAPLREALAQNRFHLAFQAQINTQKQQVIGAEILLRWEDAVLGQVPPDQIVEVAEHLGLMDTLTRWVIQSGLRQFALLRSEGYRGTMSINLCPSNLADKNLAMYIANALEVWDIPANTLVLEITESALIADIEAALKQLEQLKQMGCLLSLDDFGTGYSSLSYLKRLPIDELKIDRSFIQSMGSSDKDAAIVQSIIELAHRLQLTVVAEGVENAASAAFLQQHQCDTIQGFYYSRPVSLADFKAYFQHMEQAA
>NZ_CP054143.1|WP_173533143.1|1651458_1652781_-|deoxyguanosinetriphosphate-triphosphohydrolase
MMNWQQLLSANRLGVEDGSLPDFESGRSNYHKDHDRIVFCSPFRRMGRKTQVHPMTENDHVHTRLTHSIEVACVGRSLGVLIGEQLKGQLPAHISPFDLGGIVQAACLAHDIGNPPFGHAGEYAIRDWFRRPEQAYLMQTLTAAERRDLMTYEGNAQGFRIITQLENHRFDGGLRLTYATLGTTLKYPWSSEFAGKKGKFSCYQSELNILENVAKELGLPLIETNKWARHPLSYLMEAADDICYAILDLEDGIEIGTLPYETVEPLLMKICGGQTSLLQLEIAAAPSTRRKISLLRGKAIDRSIRDVAATFMTHYDRIMAGTYQGDLLNDCPPSMRLGLAEAKQLARDRIFNERRKIEIEVGSFTCLEILLSAFCTAAYEQHISAEMPFRMRRVLDLMDYNAPKKEWPLIEAYRRVLDFIGGMTDNYATYLAQQVGGMGR
>NZ_CP054143.1|WP_173533142.1|1650453_1651410_+|lipopolysaccharide-heptosyltransferase-I
MKKILIAKLTSLGDILFVMPMISDIQYHFPDAQIDWLVDAQFAELPAMHPAIDRVIAVPLRGYRRKSTRQNWQGIRSAIQQLRREHYDVILDCHGMIKSALFSQVAKAKLIIGPPDYRLGENAARWAYHRQVVPDANLPAVEWYRSYAALALNYSIEREIDFGIQADECLPAWMPANRPYVMCFHAASKAEKTWPVAQWLQVLQALEKQGVMAILPWGTEGEYAVAQQLAAGLTQAMVPPKLTITQIASLIRHADWSIGVDTGMTHLAENMGRATIALYTQTDSASYHPVWNTQAYALGGQGEVPEAKQVLDIMGIAT
>NZ_CP054143.1|WP_173533153.1|1664992_1666111_-|chemotaxis-protein
MFGFTFQTEQKSVPLINELAMYTAALDEIDAVIMLADTSPENKIFYMNRTARTFMNNNRAVMNQSLVAGADVGSAMKNSIHQFHRDPSRVKALLQNLASGQVKEHLADIPVGDILFQTKVSPIWGENNKLICFMAQFKNISAERKAQELVEHNRQRQLFLEERIAELADNLGAMAVSVESVAVQSSSASQSSEVMLNESKRGVEIVKDTNVSIEEVARTIDLTAASLLELGQRSESIGMIVAVIRDVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAERTTKSTSEIYGMVKDIQHEVKRSVEAIHLGQTAVHTSVDDCKQAVEALERILNEVHRMNDYITQIASAAEEQAAASQDISSKVNDLSN
>NZ_CP054143.1|WP_173533154.1|1666369_1666996_-|AAA-family-ATPase
MRKILIANPKGGSGKSTLATHLASWFAWQDDAVMLGDLDKQHSSHHWLDLRPKTLPSIQRWDIGTDHIARPPKGCQVAILDTPACFSGKKLKHAIHLVDHIIVPVLPSAFDLWACADFFADLAELKAVRHDEVKVGIIGMRVNSRTQSAQQLPAFLSRYDLPLLTCLRDTQLYNQTIQRGMTLFDLPYSRTERDRKEWQPLINWLHIR
>NZ_CP054143.1|WP_173533155.1|1667185_1668265_-|transaldolase
MSKIAAIKPFGQSIWLDNLSRGLIASGELAKILKEDAIAGVTSNPAIFYKSISSDPLYTGDLAELKKQDLTAEQRYEALVVPDIQATCDLTRSIYDQTKGVDGYVSLEVSPTLANDAQGTIDNAKRLWAEINRPNVMIKVPATPAGVIAFEELITSGINVNVTLMFNLTHVDNILTAYIRGLEARAAAGLPVDHVHAVASVFLSRVDSLIDPQLEAIGTPEALALRGKVALSFVKVSYQHYKKLFHGNRFAALKALGAHPQRLLWASTGTKNKAYSDVMYVEELIGPETVNTVPDATLALFRDHGKAANTLDTNIDAAVANLVAVRQLGINYNLAGEQLQQEGLKQFDEAFVKLLELTK
>NZ_CP054143.1|WP_173533156.1|1668395_1669682_-|phosphate-regulon-sensor-histidine-kinase-PhoR
MFWLRSIILYFFIAVIAFAISAFTDILWGFVFALVMLSITICYHLINLNRLNQWLKHPDVDTVPGSMMLWQDVFDQLYEQVRSQKKSKDRLANTLDRFLSAAEALPDGVVILDEYDRIEWCNPASQIHLGLNRKTDSGQQITNLLRHPALREYLKEQDFSHPVTLRTMRPQEQVLSVQMIPFDSTRKLLLSRDITQLDRVQTVHRDFVANVSHELRTPLTVVGGFIETMIDMPHIDAPTREQHMQLMYEQTQRMQRLVDDLLTLSKLENGQQLKEEEVDIPQLLQLLRIEAEGLSQGRHSISIESIARQRLIGNHDELHSALGNLVSNAVRYTPAGGQIMLSWQMRGDEACFVVKDTGIGIAPEHVPRLTERFYRVDRGRSRNTGGTGLGLAIVKHILHRHQAVMAVESRLGEGSEFAVKFPTQRVLE
>NZ_CP054143.1|WP_173533157.1|1669765_1670452_-|phosphate-regulon-transcriptional-regulator-PhoB
MAATILLVEDEPAIQELIAFNLSQVGHHIIRADSAEAASSVVRNALPDLILLDWMLPGMTGIDFAKKLRADERTRSIPLIMLTARSDEQDKIIGLETGADDYITKPFSPRELQARIKAVLRRRAPQVTDDPVEIKGLRLDPITHRVFGNAQPLDLGPTEFRLLHFFMTHPERVHSRAHLLDQVWGDHVFVEERTVDVHIRRLRSSLEGTGHDNLIQTIRGSGYRLSVN
>NZ_CP054143.1|WP_173534643.1|1670798_1671155_+|DUF971-domain-containing-protein
MPTTPQPTELVLHQASRVLDIAFADGARFQLPCEFLRVSSPSAEVRGHGIGNEVLQVGKAKVNITAIEPVGHYAIKLVFDDGHDSGLFSWEYLYELGRDQAALWDQYLQKLAAAGASR
>NZ_CP054143.1|WP_173533158.1|1671264_1672008_+|bifunctional-demethylmenaquinone-methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol-methylase-UbiE
MSEHDQATHFGFKTVNESEKAQKVAEVFHSVAQKYDVMNDLMSGGLHRVWKFFTIETSGVKAGDKVLDIAGGTGDLSKAFAKKVGKTGQVWLTDINSSMLGVGRDRLMDQGFALPVAQCDAEKLPFPDNYFDLVSVAFGLRNMTHKDAALKEMHRVLKPGGRLLVLEFSKVWAPLKPAYDIYSFKLLPFMGKLVANDADSYQYLAESIRMHPDQETLKQMMLDAGFGRADFHNLTGGVVALHKGIKF
>NZ_CP054143.1|WP_173533159.1|1672097_1672637_+|sterol-binding-protein
MNHLFAQAPMLAAELAPLQGRTFRVQLPFAAATVVVTEAGLLADSQADAEAVLTLPARFFITRWRDRPAASRLVQISGDAELAGKVGNVLAALQWDASEDLSLLLGDVLAERVRRVAVSMVRTPQMMGERMAQTLVEYCRDEQKILPQAYAVTQFCDQVDHLRDDVARLELRLRRLERS
>NZ_CP054143.1|WP_173533160.1|1672693_1674205_+|ubiquinone-biosynthesis-regulatory-protein-kinase-UbiB
MSLFRFIKIARVVVQFGLDEFLLGHERVRGLGQLFNRALFWRRLDQPRAVRLRLALESLGPIFVKFGQVLSTRRDLMPLDIANELAQLQDNVPPFASAVAIEQIERSAGRSIAELFLEFDPQPVASASVAQVHRARLHNGQAVAVKVLRPGILPVIESDLALLKTLAVLVEKLFADGKRLRPREVVAEFDRYLHDELDLMHEAANASQLRRNFLNSDQLIVPEVFYDFCSREVLVLEWMDGIPIGRIDELKAAGMDLKKLSRFGVEIFFSQVFRHGFFHADMHPGNIFVAPDNRYIALDFGIVGTLSDTDKQYLAINFLAFFNRDYHRVATAHIECGWVPADTRVEALESAIRTVCEPFFNKPLSQISFGFVLLRLFETSRRFNVEIQPQLVLLQKTLLNIEGLGRQLDPDLDLWQTAKPFLERWMNEQMGWRGLILTLKKEAPQWATLLPTLPRKLNEVLNQNHTELLLTGYRGLMWEQKKRNAILAVIAALLAGILLTIWW
>NZ_CP054143.1|WP_173533161.1|1674294_1674900_+|hypothetical-protein
MRMKQLIFVSGLMLASSVLLAQTMPGPQGEPAAGQVQLTPAQQRAAIQKHTQATLNEVYKLYPDAQAQIAKAAGYAVFQTGGVQLVLLGAGAGDGMAVSGKKIVYMKMVLAKAGLGFGIKETRQVFVFSTAKAFQQFINKGWTGSAEATLAAKADESGKAISGARHLGKGVYFYQFTEAGLTAEATVVGSKYYQDAALNSK

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Crispr_ID: NZ_CP054143_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054143_2

2524664-2526807

TypeII

Consensus_repeat	Method
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	PILER-CR
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CRISPRCasFinder
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CRT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	PILER-CR

32 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP054143_2

>merge|NZ_CP054143|2|2524664-2526807|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCGCGACGACGGCCGTTGCCGGTGCTGCTTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTTCTTCTGTTCATTGAGTCCAACATTAGCCATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTTCTCTAGCAGAGAGCATTCAACTAAAACGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCAAGGACGTGTCACTAGGCCAGCGTATGCAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCCGTGAGCTTGGTAGGGTTAGCAACAAAGTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACATTCAAAGAGCAAGACGCTTTGCTGCAAATATTGTCGCTTTCCGGGGTGAGAGCGGGAACTACAACAGGTAACGTGCCGTATAACGCATATCTGGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACAGGGCTTGGGTTGCGGCAAAGCGGTAGGTGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGAATCGTCACAGCTTCCGTGCCAAAGCACAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTCCATTAGGGCATAAGCATCTGGCGTACTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCGCGTTTGCACAAAGCAACCAATTCCGAATATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTTGGCGAATTAAACCAAGGCAAACACCTGAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCCGGCGCACCGACTCCTCAATACCCGACCAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTGCTTATGGTGCGGCCCGAGGCCATTTGGTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTCATCAATCCACACACCGGCATGAGTTAGTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGGGATTGCCGACTGATAGCGAGCGCCCCTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACATGGTCTGTAGTGCCGCGACTCGCGCTATTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGGTGTGGGCGGTGACGTGTTTTGGGTTAAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGGACCAAGCCAGCACGGCGACCGCCTCTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGGCAGCATATTAGCCCCCCGAGTAAGTGAAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTACGCATGAACTCGGCCAGCTGCTCGTATTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCAATCCGACATGCAGCGTGGCTTGCACTTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTCGTTTCCAGTGCTTGCCGTGACACCCCCAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTGTGTGTTGATCGGCGTGATCGGGGCTGCGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGGCGGCGGTGAGTTTACCCAGTGCCATTTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTTCGCGTCGGGCGATGGCTGGAATCGACAAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGTAATGACCGGCACCGAGCGCCACACGTCGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGTAGTACATTTCTGTGACCGTACCCAATTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTTGACAATGGCGATTGAGGAAAAAGGTTTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACAAGTGAAGTTGAAGCCTTGGTGAAATCAAAATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACCAAGCGGATAGCACCAGCGCGAATATCACGATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACTCGCGGCGCGCAATTGATTCACCCGCGCATATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC

>NZ_CP054143|2|1|2524664-2526477|PILER-CR
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGACGACGGCCGTTGCCGGTGCTGCTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTTCTGTTCATTGAGTCCAACATTAGCC
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTCTAGCAGAGAGCATTCAACTAAAACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGGACGTGTCACTAGGCCAGCGTATGCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGTGAGCTTGGTAGGGTTAGCAACAAAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATTCAAAGAGCAAGACGCTTTGCTGCAAAT
ATTGTCGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGTAACGTGCCGTATAACGCATATCTGG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGGCTTGGGTTGCGGCAAAGCGGTAGGTG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GAATCGTCACAGCTTCCGTGCCAAAGCACA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCCATTAGGGCATAAGCATCTGGCGTACTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGTTTGCACAAAGCAACCAATTCCGAAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGGCGAATTAAACCAAGGCAAACACCTGA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGGCGCACCGACTCCTCAATACCCGACCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGCTTATGGTGCGGCCCGAGGCCATTTGGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCATCAATCCACACACCGGCATGAGTTAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGGATTGCCGACTGATAGCGAGCGCCCCTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATGGTCTGTAGTGCCGCGACTCGCGCTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGTGTGGGCGGTGACGTGTTTTGGGTTAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGACCAAGCCAGCACGGCGACCGCCTCT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCAGCATATTAGCCCCCCGAGTAAGTGAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TACGCATGAACTCGGCCAGCTGCTCGTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAATCCGACATGCAGCGTGGCTTGCACTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGTTTCCAGTGCTTGCCGTGACACCCCCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGTGTGTTGATCGGCGTGATCGGGGCTGCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCGGCGGTGAGTTTACCCAGTGCCATTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCGCGTCGGGCGATGGCTGGAATCGACAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAATGACCGGCACCGAGCGCCACACGTCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGTAGTACATTTCTGTGACCGTACCCAATTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGACAATGGCGATTGAGGAAAAAGGTTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AAGTGAAGTTGAAGCCTTGGTGAAATCAAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGCGGATAGCACCAGCGCGAATATCACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGCGGCGCGCAATTGATTCACCCGCGCAT


>NZ_CP054143|2|1|2524664-2526807|CRISPRCasFinder
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGACGACGGCCGTTGCCGGTGCTGCTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTTCTGTTCATTGAGTCCAACATTAGCC
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTCTAGCAGAGAGCATTCAACTAAAACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGGACGTGTCACTAGGCCAGCGTATGCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGTGAGCTTGGTAGGGTTAGCAACAAAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATTCAAAGAGCAAGACGCTTTGCTGCAAAT
ATTGTCGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGTAACGTGCCGTATAACGCATATCTGG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGGCTTGGGTTGCGGCAAAGCGGTAGGTG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GAATCGTCACAGCTTCCGTGCCAAAGCACA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCCATTAGGGCATAAGCATCTGGCGTACTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGTTTGCACAAAGCAACCAATTCCGAAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGGCGAATTAAACCAAGGCAAACACCTGA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGGCGCACCGACTCCTCAATACCCGACCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGCTTATGGTGCGGCCCGAGGCCATTTGGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCATCAATCCACACACCGGCATGAGTTAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGGATTGCCGACTGATAGCGAGCGCCCCTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATGGTCTGTAGTGCCGCGACTCGCGCTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGTGTGGGCGGTGACGTGTTTTGGGTTAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGACCAAGCCAGCACGGCGACCGCCTCT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCAGCATATTAGCCCCCCGAGTAAGTGAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TACGCATGAACTCGGCCAGCTGCTCGTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAATCCGACATGCAGCGTGGCTTGCACTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGTTTCCAGTGCTTGCCGTGACACCCCCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGTGTGTTGATCGGCGTGATCGGGGCTGCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCGGCGGTGAGTTTACCCAGTGCCATTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCGCGTCGGGCGATGGCTGGAATCGACAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAATGACCGGCACCGAGCGCCACACGTCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAGTACATTTCTGTGACCGTACCCAATTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGACAATGGCGATTGAGGAAAAAGGTTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AAGTGAAGTTGAAGCCTTGGTGAAATCAAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGCGGATAGCACCAGCGCGAATATCACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGCGGCGCGCAATTGATTCACCCGCGCAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC

>NZ_CP054143|2|2|2524664-2526807|CRT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGACGACGGCCGTTGCCGGTGCTGCTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTTCTGTTCATTGAGTCCAACATTAGCC
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTCTAGCAGAGAGCATTCAACTAAAACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGGACGTGTCACTAGGCCAGCGTATGCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGTGAGCTTGGTAGGGTTAGCAACAAAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATTCAAAGAGCAAGACGCTTTGCTGCAAAT
ATTGTCGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGTAACGTGCCGTATAACGCATATCTGG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGGCTTGGGTTGCGGCAAAGCGGTAGGTG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GAATCGTCACAGCTTCCGTGCCAAAGCACA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCCATTAGGGCATAAGCATCTGGCGTACTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGTTTGCACAAAGCAACCAATTCCGAAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGGCGAATTAAACCAAGGCAAACACCTGA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGGCGCACCGACTCCTCAATACCCGACCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGCTTATGGTGCGGCCCGAGGCCATTTGGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCATCAATCCACACACCGGCATGAGTTAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGGATTGCCGACTGATAGCGAGCGCCCCTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATGGTCTGTAGTGCCGCGACTCGCGCTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGTGTGGGCGGTGACGTGTTTTGGGTTAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGACCAAGCCAGCACGGCGACCGCCTCT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCAGCATATTAGCCCCCCGAGTAAGTGAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TACGCATGAACTCGGCCAGCTGCTCGTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAATCCGACATGCAGCGTGGCTTGCACTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGTTTCCAGTGCTTGCCGTGACACCCCCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGTGTGTTGATCGGCGTGATCGGGGCTGCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCGGCGGTGAGTTTACCCAGTGCCATTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCGCGTCGGGCGATGGCTGGAATCGACAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAATGACCGGCACCGAGCGCCACACGTCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAGTACATTTCTGTGACCGTACCCAATTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGACAATGGCGATTGAGGAAAAAGGTTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AAGTGAAGTTGAAGCCTTGGTGAAATCAAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGCGGATAGCACCAGCGCGAATATCACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGCGGCGCGCAATTGATTCACCCGCGCAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC

>NZ_CP054143|2|2|2526508-2526807|PILER-CR
	CGCGACGACGGCCGTTGCCGGTGCTGCTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTTCTGTTCATTGAGTCCAACATTAGCC
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCTCTAGCAGAGAGCATTCAACTAAAACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGGACGTGTCACTAGGCCAGCGTATGCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGTGAGCTTGGTAGGGTTAGCAACAAAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATTCAAAGAGCAAGACGCTTTGCTGCAAAT
ATTGTCGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGTAACGTGCCGTATAACGCATATCTGG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AGGGCTTGGGTTGCGGCAAAGCGGTAGGTG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GAATCGTCACAGCTTCCGTGCCAAAGCACA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCCATTAGGGCATAAGCATCTGGCGTACTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CGCGTTTGCACAAAGCAACCAATTCCGAAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGGCGAATTAAACCAAGGCAAACACCTGA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CCGGCGCACCGACTCCTCAATACCCGACCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGCTTATGGTGCGGCCCGAGGCCATTTGGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCATCAATCCACACACCGGCATGAGTTAGT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGGATTGCCGACTGATAGCGAGCGCCCCTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	ATGGTCTGTAGTGCCGCGACTCGCGCTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGTGTGGGCGGTGACGTGTTTTGGGTTAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGACCAAGCCAGCACGGCGACCGCCTCT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCAGCATATTAGCCCCCCGAGTAAGTGAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TACGCATGAACTCGGCCAGCTGCTCGTATT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAATCCGACATGCAGCGTGGCTTGCACTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGTTTCCAGTGCTTGCCGTGACACCCCCA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TGTGTGTTGATCGGCGTGATCGGGGCTGCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GGCGGCGGTGAGTTTACCCAGTGCCATTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTCGCGTCGGGCGATGGCTGGAATCGACAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	GTAATGACCGGCACCGAGCGCCACACGTCG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAACGTAGTACATTTCTGTGACCGTACCCAATTTATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TTGACAATGGCGATTGAGGAAAAAGGTTTT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	AAGTGAAGTTGAAGCCTTGGTGAAATCAAA
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	CAAGCGGATAGCACCAGCGCGAATATCACG
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC	TCGCGGCGCGCAATTGATTCACCCGCGCAT
ATTGTAGCTTTCCGGGGTGAGAGCGGGAACTACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054143.1\|WP_173533821.1\|2520085_2523370_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP054143.1\|WP_173533817.1\|2515592_2516525_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237537
NZ_CP054143.1\|WP_173533832.1\|2535866_2537240_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054143.1\|WP_173533824.1\|2527414_2528161_+\|cytochrome-c5-family-protein	unknown	unknown	gnl\|CDD\|225784
NZ_CP054143.1\|WP_173533815.1\|2513022_2513472_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_CP054143.1\|WP_173533826.1\|2529347_2530202_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367100
NZ_CP054143.1\|WP_173533819.1\|2517468_2518653_+\|PD-(D/E)XK-nuclease-family-protein	unknown	unknown	gnl\|CDD\|379536
NZ_CP054143.1\|WP_173533828.1\|2530647_2531553_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP054143.1\|WP_173534703.1\|2513468_2514734_+\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|176454
NZ_CP054143.1\|WP_173533818.1\|2516540_2516960_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054143.1\|WP_173533823.1\|2524265_2524598_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP054143.1\|WP_173533822.1\|2523356_2524238_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP054143.1\|WP_173533820.1\|2518801_2519419_-\|recombinase-family-protein	unknown	unknown	gnl\|CDD\|239736
NZ_CP054143.1\|WP_173533825.1\|2528179_2529286_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223526
NZ_CP054143.1\|WP_173533831.1\|2534376_2535738_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	unknown	unknown	gnl\|CDD\|237969
NZ_CP054143.1\|WP_173533816.1\|2514996_2515248_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054143.1\|WP_173533829.1\|2531593_2533468_+\|1-deoxy-D-xylulose-5-phosphate-synthase	unknown	unknown	gnl\|CDD\|235470
NZ_CP054143.1\|WP_173533827.1\|2530402_2530648_+\|exodeoxyribonuclease-VII-small-subunit	unknown	unknown	gnl\|CDD\|179195
NZ_CP054143.1\|WP_173533830.1\|2533642_2533858_+\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|381078
NZ_CP054143.1\|WP_173533833.1\|2537625_2538576_+\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|223982

Protein	Function_ID	Function_description	E-value
NZ_CP054143.1\|WP_173533821.1\|2520085_2523370_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP054143.1\|WP_173533817.1\|2515592_2516525_+\|hypothetical-protein	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	0.00407376
NZ_CP054143.1\|WP_173533833.1\|2537625_2538576_+\|rhodanese-related-sulfurtransferase	gnl\|CDD\|223982	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only].	7.99531e-168
NZ_CP054143.1\|WP_173533815.1\|2513022_2513472_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	2.02476e-40
NZ_CP054143.1\|WP_173533826.1\|2529347_2530202_-\|hypothetical-protein	gnl\|CDD\|367100	pfam02485, Branch, Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme. I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. This is a fmmily of glycosyl-transferases that are Type II membrane proteins that are found in the endoplasmic reticulum (ER) and Golgi apparatus.	5.29287e-30
NZ_CP054143.1\|WP_173533819.1\|2517468_2518653_+\|PD-(D/E)XK-nuclease-family-protein	gnl\|CDD\|379536	pfam14281, PDDEXK_4, PD-(D/E)XK nuclease superfamily. Members of this family belong to the PD-(D/E)XK nuclease superfamily.	2.36936e-25
NZ_CP054143.1\|WP_173533828.1\|2530647_2531553_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	7.5193e-90
NZ_CP054143.1\|WP_173534703.1\|2513468_2514734_+\|Y-family-DNA-polymerase	gnl\|CDD\|176454	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V. umuC subunit of Pol V. Pol V is a bacterial translesion synthesis (TLS) polymerase that consists of the heterotrimer of one umuC and two umuD subunits. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol V, RecA, single stranded DNA-binding protein, beta sliding clamp, and gamma clamp loading complex are responsible for inducing the SOS response in bacteria to repair UV-induced DNA damage.	2.97659e-176
NZ_CP054143.1\|WP_173533824.1\|2527414_2528161_+\|cytochrome-c5-family-protein	gnl\|CDD\|225784	COG3245, CycB, Cytochrome c5 [Energy production and conversion].	1.28693e-21
NZ_CP054143.1\|WP_173533823.1\|2524265_2524598_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	7.05897e-40
NZ_CP054143.1\|WP_173533822.1\|2523356_2524238_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.37079e-110
NZ_CP054143.1\|WP_173533820.1\|2518801_2519419_-\|recombinase-family-protein	gnl\|CDD\|239736	cd03767, SR_Res_par, Serine recombinase (SR) family, Partitioning (par)-Resolvase subfamily, catalytic domain; Serine recombinases catalyze site-specific recombination of DNA molecules by a concerted, four-strand cleavage and rejoining mechanism which involves a transient phosphoserine linkage between DNA and the enzyme. They are functionally versatile and include resolvases, invertases, integrases, and transposases. This subgroup is composed of proteins similar to the E. coli resolvase found in the par region of the RP4 plasmid, which encodes a highly efficient partitioning system. This protein is part of a complex stabilization system involved in the resolution of plasmid dimers during cell division. Similar to Tn3 and other resolvases, members of this family may contain a C-terminal DNA binding domain.	5.55687e-74
NZ_CP054143.1\|WP_173533825.1\|2528179_2529286_-\|SIS-domain-containing-protein	gnl\|CDD\|223526	COG0449, GlmS, Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane].	2.79194e-67
NZ_CP054143.1\|WP_173533831.1\|2534376_2535738_+\|tRNA-5-hydroxyuridine-modification-protein-YegQ	gnl\|CDD\|237969	PRK15452, PRK15452, putative protease; Provisional.	0
NZ_CP054143.1\|WP_173533829.1\|2531593_2533468_+\|1-deoxy-D-xylulose-5-phosphate-synthase	gnl\|CDD\|235470	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional.	0
NZ_CP054143.1\|WP_173533827.1\|2530402_2530648_+\|exodeoxyribonuclease-VII-small-subunit	gnl\|CDD\|179195	PRK00977, PRK00977, exodeoxyribonuclease VII small subunit; Provisional.	2.51316e-15
NZ_CP054143.1\|WP_173533830.1\|2533642_2533858_+\|(2Fe-2S)-binding-protein	gnl\|CDD\|381078	cd19945, Fer2_BFD, bacterioferritin-associated ferredoxin (BFD) [2Fe-2S]-binding domain. This family includes Escherichia coli and Pseudomonas aeruginosa bacterioferritin-associated ferredoxin BFD which binds an [2Fe-2S] cluster and appears to interact with bacterioferritin (E. coli BFR/YheA and P. aeruginosa BfrB), a dynamic regulator of intracellular iron levels. It has been suggested that BFD and bacterioferritin form an electron transfer complex which may participate in the iron storage or iron immobilization functions of bacterioferritin. For Pseudomonas aeruginosa, it has been shown that mobilization of Fe3+ stored in BfrB requires interaction with BFD, which transfers electrons to reduce Fe3+ in the internal cavity of BfrB for subsequent release of Fe2+. The stability of BFD may be aided by an anion-binding site found within this domain. In addition to BFD, the BFD-like [2Fe-2S]-binding domain is found in a variety of proteins such as the large subunit of NADH-dependent nitrite reductase and the Cu+ chaperone CopZ. It comprises a helix-turn-helix fold, and binds an [2Fe-2S] cluster via 4 highly-conserved Cys residues, found in loops between the alpha-helices. For the class of proteins having a BFD-like [2Fe-2S]-binding domain, the Cys residues are organized in a unique C-X2-C-X31-35-C-X2-9-C-arrangement. [2Fe-2S] clusters are sulfide-linked diiron centers, a primary role for which is electron transport.	2.04933e-14

>NZ_CP054143.1|WP_173533823.1|2524265_2524598_+|CRISPR-associated-endonuclease-Cas2
MSQVTRRFMRLLVFFDLPTITKADKRAYTLFRRFLLQDGYDMLQWSVYSRIVNGEDDVKKHQQRLVANLPKKGSIRCMKVSEKQYVAMEILVGTVTTQEEKVSLQQVLVF
>NZ_CP054143.1|WP_173533822.1|2523356_2524238_+|type-II-CRISPR-associated-endonuclease-Cas1
MAWRSILISQPARLAVKNRQLLLEQDMGLSATIPLEDIAVVVLETPQATITSALLAELAAHDVAVITCDETHHPNGVLLPYLPHSRAFKVMQQQLALTLPQKKRAWQGVIQQKIRNQAFCLDVFKPQAGRFLRDQAERVRSGDPDNREASSARYYFIELFGDEFTRDKPCWQNSALNYGYAIFRAAIARSLVCYGFLPAFGLQHHNQLNTFNLADDFIEPLRPVVDVWVRQQNTTSSELSSTDKAALIQLLYTDVNMPYGAMNVLSAIDHMAQCFGRFCSTGDLNELAWPKLA
>NZ_CP054143.1|WP_173533821.1|2520085_2523370_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MQQAVSYDLGLDIGIASVGWCVLGERHIIDLGVRAFDKAETPDGESLNTARRTARLLRRRLRRRAWRLLKLSRLLKREGLITDSRLFLQQTPITQSLWKLRAEALDRQLNTEEWARVIYHICKHRGFWFASKADAEGSEGGKVKQGLERTRNLMREHGYRSAAEMMLAQFPNNQRNKRGDYGQSLSRELLADELHSLFEKQREFGNPHTNDDFKDAILNTKTGLLWQQKPALSGKEMLERIGFCTFERKKSGKNKDEYRAAKHTWSAERFVWLTRLNNLRININGESRPLSEVERKAVIDLPYEKAKLTHKQLKAHLIKLGPWPEAVRFTGLNYRDNSKDPEESKLIELTGWHTLRTTLEKAGLKTEWQGIATQPLLINAITSILSIYKTDEEIQRELTACNLTPAVINSLLAISFSDFIRLSLKALDGILPGMERGQRYDEACLAAGYHHSVLVENSASRFLPAFDEDAPNNPVVKRALNQTRKVVNAIIRQYGAPQRVHIEMARDLSRPLDERYKIEKAQSEFAERNEKDRERFSEAFGRRPTGREFEKWQLYQEQDGKCAYSLSPLDLNRLIDDANYAEVDHALPYSRSFDDSKNNKVLALTRENRDKANRTPFEYLDGASDSERWQRYAAAVNSNKKYRQAKRDRLLRQQFGKDEASGFIERNLNDTRYICKYFKNFVEQHLKLASDAKRCIVVSGQLTSFLRARWGLAKLREGSDRHHAVDAAVVAACSAGMVKRLSDYARRKETLNAKDGLIDLETGEVANLAMWRQLEQHFPRPWEHFEMELSLRAGLDRSTGKVNNTLSLELTREALAALGYDETMLSSIRPLFVSRAPQRRNSGAAHKDTIYAQRPMPAQPNRVTQKIALSALKLSDLDLDPERCGLIEPHRNVALYTALRERLEAFGGKADKAFATPFYKPTRDGSQGPIVRTVTKVIDNLSGIALRGGIAKNDSMLRVDVFTKAGKFHLVPIYVQHRIIKNVKDLPNRAIVAAKEESDWTQIDDTFSFCFSLHPNDLVRIQLKGKPAIEGYYSGCDRATGGVNLWVHDRNQAIGKDGLIRGVGVKVALSVDKFNVNVLGQVYLNQAGSRRGLA
>NZ_CP054143.1|WP_173533820.1|2518801_2519419_-|recombinase-family-protein
MFVRAYLRASTKEQDASRARQQLDAFAAEHNLRIASYYIENESGTKLDRPELMRLLNDASHGDVLLVEQVDRLSRMKNSDWLTLRQMIGDKGVRIVALDLPTSHSMLKDGDGFTALMLAAINNMLLDMLAAIARKDYDDRRRRQAEGVAKAKAQGLYAGRPKDAELHRKIACLLAEGKSWSAIQDLLGCGRGTIKRVKDKIQEGQ
>NZ_CP054143.1|WP_173533819.1|2517468_2518653_+|PD-(D/E)XK-nuclease-family-protein
MQNLIELIKGVQGLPATVMQEPNFFSIGGTGYFENPTSDLLAIFMGGQGGTPTWLAKALVYCLVDQGHFSQDAFDLCEWNELFVEREVSINDELTDTYKRLDLLVTGAAFVLGIEHKVYASAAANPFDVYDQLLQSRSEGKTIIKCVLRPSKYAADIRGDWPVVSYDELIVKAKLFYGSDIAFTPISKWQFFYTEFLQHLYGLAHPENENPMDKQSFDFVIQHFITLRKGRNLLDDFEKQLLHQGSATVSKVLQELGVETNIVTRSHTWGEAKALRFRPECWGGESDVVLAFYGNEDDAEQPINFYIRAYIKKGSEKVDFDTISKELSHRTAKKLDLWEDDKNVESNHCWQERDGKYLCFGAYAKDRTLEGTLQALASLTKWLQLNAYSTVELA
>NZ_CP054143.1|WP_173533818.1|2516540_2516960_+|hypothetical-protein
MLKNFTNKIPSVAKAIPIPSTAAMDAFNNLVDAWKDCNNTAEIEKTKRENIKSWRDTNIKAIEENSAILKLYLEKSFQERASTIQGTFERLDQALVEGNSEVVGLMMNSIVAIVKESPLAQARQVIADMNNPNVSTIDI
>NZ_CP054143.1|WP_173533817.1|2515592_2516525_+|hypothetical-protein
MPLPLILWGAAALLAGTGVVKGVGAMSDFDDAKNIGKSAESRYKEAESDLDSQRKKTNAAFEKLGQIKLSVFTTQIKHLVQAIKNSGKNAQSTLSQFDQSFSVESLKEMEALVLKSLEIEHGIASGAVTGVLAGLGAYSGVGTLAAASTGAAISGLSGVAATNATLAWLGGGSLATGGFGMAGGALALGGIVLGPALAIGGFMMASKAEEALTKAKKYEADVDIAIEQMKSTEIILVALSDNAKEMASALVETARRFESIKVNNNQNPVAFEQMCMLGKGLKAIADTPIMESDGTASKHIKAKIAGFLVI
>NZ_CP054143.1|WP_173533816.1|2514996_2515248_-|hypothetical-protein
MDREVNIERRRIIKNGGDAADLWEDSNWQFDYMSLEEDEASFHSRQILERARKLRISTPLMFEDHVLSADYQRSGLNGHHLFL
>NZ_CP054143.1|WP_173534703.1|2513468_2514734_+|Y-family-DNA-polymerase
MIALVDVNNFYVSCQRVFEPKLMGKPVVVLSNNDGCVVARSSEAKALGIKMAAPWHQLRDFAQQEGIIARSSNYALYADMSHRVMTILSRFSPNQEIYSIDECFLSFDGLLQDHTELAQDIRRTVLQWTGLPVCVGIAPTKTLAKLANHIAKKQAPFNGVCAWQQLNPNQQDAQMQALPVGDVWGIGRRISERMAQEGIHTIADLRASNADQIRQRHSIVVQRTVHELRGIPSIELEESTPDKQQILCSRSFGQEIYTEQELGEAISTYIARAAEKLRQQGSLAGSLAVFIRTNPFRPKDPQYSQHILVPLTQASDDTLLLTRAALWVLKRIYRTGFAYAKAGVMLCDLQPRTAVQGHLFLQTADPIKRAALNKVMDDINRQWGRGSIRVASAGFNHGWKMRQNTLSPYWTTRWADLPIVR
>NZ_CP054143.1|WP_173533815.1|2513022_2513472_+|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MSLHLHPPIPAALEAKSLYLPVMGVSVSAGFPSPAEDWAEERVDLNQRYVQHPEATFYFTVAGDSMVSSLAERSIPDGATLIVDRALSAKHDDIVVAVIDGDFTVKRLYCRGARLALIAENPVYPPIVLGEEQELSIWGVVTAWIARPR
>NZ_CP054143.1|WP_173533824.1|2527414_2528161_+|cytochrome-c5-family-protein
MSGSNASASKSVVGMILAALIGVPLFVYLVIKLFTSGMSMNMASSTMTNEAVAARLQPVGVVKIVDSTPIGSRSGKAVYEAVCISCHGAGLAGAPKFADAAAWSTRIGQGFATLVKHAVVGFNAMPAKGGDPALTDEEVARAVAFMGNAAGAKFEEPKVAAGAAATIDPNVKGKEIYASVCMACHDTGVAGAPKFGDKAAWAPRLKDGVDNAIAIATKGLNAMPPKGGYSGSDAEFNAAALYLINASK
>NZ_CP054143.1|WP_173533825.1|2528179_2529286_-|SIS-domain-containing-protein
MPIASVDLSSPHSNTAERGGLLQAINDQAALYANLIEHAKANTLAPWLQQPERFADTQAVLLIASGSSFHAAQVARFWIESLANLPTQVELASEFCYQHLRSRPHTLVIILAESGEAADTLAALKYAQQLDYPLTIAIGHHADSTLMQQAQWQLVLEVGEQHSRIATKTFCAQLLGLFLITQTLAQSQNQAIPSDIDAELAALPYAIAQVLSLAPQLKQWAQCLQQPSAIFITARQNYTPIASEGALKFKAMAHRLAEACSCGELKHGIASLATQKIALIACLPWDSVAEKNLADLRQFHHHHCAIFVLSDTPLTKINGLNSIQMPYKLNHLNPLLYAIALQLLAYYTSTTSDSFEQNIKKATSKDVA
>NZ_CP054143.1|WP_173533826.1|2529347_2530202_-|hypothetical-protein
MTTIAYFILAHAHPEQISRLVQQLNTPHSRFYIHIDANTPDAIFTALQSQLSALENIHFIERQACRWGGFSLVDASLRLMAAANKDGFDWGVLLSGQDYPIHSNQYIEETLARSPYLGLIDIKPAPEFDIAYRYRAWYFEALNGTRLNKALQKIQRLSRKVGIERALPAPISQVYAGSQWWTLSHTACQTVLDFVAKQPQVVDFFRHTLIPDEMFFQTILMNSPLAEQLSSDARRYLEWDEGAWSPLLLKPENISQLRDSKALFARKFAADSATTQALINLHRQ
>NZ_CP054143.1|WP_173533827.1|2530402_2530648_+|exodeoxyribonuclease-VII-small-subunit
MAKAAAKSANLPDNFEQGLAELEALIAQMEAGGQALDASLLAFSRGTELLRFCESKLSAAEQQVRLLEGGELKPMPKMGTE
>NZ_CP054143.1|WP_173533828.1|2530647_2531553_+|polyprenyl-synthetase-family-protein
MSKTVATDFKLWMEDVQAQMERALSRVLPSSNHLPERLHDAMRYSVLDGGKRVRPLLVFAAGSLVDAPAERLQYAGCALEFIHAYSLVHDDMPAMDNDVLRRGKPTVHVAYGEATALLAGDALQAAAFEVLANHSLADNPADQLQMIRILASASGSLGMCGGQGIDLYSVGQTLTLPQLEMMHILKTGALIRAAVLLGSYCGTPLTSEQREALDHYAKCIGLAFQVVDDILDCEADSATLGKTAGKDAANNKPTYVALLGLKGAKEKAAELKASALASLAPFGERANILSALAGYIVDRKY
>NZ_CP054143.1|WP_173533829.1|2531593_2533468_+|1-deoxy-D-xylulose-5-phosphate-synthase
MNYPLLDTIEIPADLRQLDRKELPALAQQLRSYLLDSVSHTGGHFASNLGAVELTVALHYVFDTPHDRLVWDVGHQSYPHKILTGRKNRMLTMRQKGGLAGFPKREESEYDTFGVGHSSTSIGAALGMAEAALIKGEKRKAIAVIGDGSMTAGQAIEALFNAGHRDDVDLLVILNDNEMSISPNVGAFNNYLAKLLSGKFYNGIRNASGKVLDAVPPLKEFAKKGEESVKGFLTPGTLFEEIGFNYIGPIDGHDMETLVATLSNIKQLKGPQFLHVVTKKGNGYKLAVADPVKYHAVAPFNQQDGVCSSKVSKPTFTQVFGDWLCDMAAQDEQLVGITPAMREGSGMVRFHAEYPSRYFDVGIAEQHAVTFAAGLACEGLKPVVAIYSTFLQRAYDQLIHDVALQNLDVTFAIDRAGLVGADGPTHAGSFDLSFMRCIPNLAILAPGDENECRQMLYTAYQYAGPAAVRYPRGSGLGATVESEMHALPWGKGEIRRSRQDTATTTRRVAILAFGAVLEPALAAAEALDATVANMRFIKPLDTELVLALAASHDLLVTVEDNAIMGGAGSAVLECLAAQGVSRAVLQLGLPDSYVEHGEQKQILADCGLDDAGIVASIEQRLAVL
>NZ_CP054143.1|WP_173533830.1|2533642_2533858_+|(2Fe-2S)-binding-protein
MIVCVCNNVSDKAINRAVAQQGVRTFAQLRQVTEVATCCGKCARCAKQVLKAALAEQAEQQHVPLSGLGFA
>NZ_CP054143.1|WP_173533831.1|2534376_2535738_+|tRNA-5-hydroxyuridine-modification-protein-YegQ
MTLKAPELLLPAGTLEKMSAAYDFGADAVYAGQPRYSLRARNNDFKLEQIGQGIEEAHARGKKFFVASNILPHNAKVKTYLADMEPVIAMKPDALIMADPGLIMMVREKWPEQVIHLSVQANTVNYAGVKFWKSMGLERVILSRELSLDEIEEIRQLCPDMELEVFVHGALCIAYSGRCLLSGYFNHRDPNQGTCTNACRWDYKTHDTATDDAGDVQPKEQIIQFDFNKAMNDANQVFSACGGQERHPLADKTYLIEEANRPGELMPIVEDEHGTYIMNSKDLRAVQHIERLVKMGIDSLKIEGRTKSLYYVARTAQVYRQAIDDAVAGRPFNPTLLADLDGLANRGYTDGFYQRHTTHEAQNYLDGHSKAHRSQYVGEVLNIQDGWAEIEVKNKFSVGDSLEIIHPSGNIIVKLEQIRGKNGALVESALGSGAKAAIPLDAKYANALIARLF
>NZ_CP054143.1|WP_173533832.1|2535866_2537240_-|hypothetical-protein
MQKIIDVAVKELISIIDSKKHSKKVAMQFVLEELDAARQGNDYVKDKIKSFYFNESDYIGAMESSWEDVDGPTGPQQFLVVLTMQLSKEIGIDNAAMVRISIVEYIVCHYKFGRYYLDEEIRRATKPLKLFDVLVDDENFLHPNFKYLLESKNKPLVDVISRWASGFEDRDNKFNYEFQTTFNSSFWEVYLYQCFKDLNLNVDFSKASPDFTVKTSSNEIINIEAVTANHAQDSSPEWENEKLKENGEFLNFASVRILNAINSKHKKYLSTYSKFEHVVGNPFVVAVAPFEQNMFFIQNNEAINRVLYGQGIDKDNGFTEVEVPFALKNEKVALDLGIFTNDKYKEVSAIIFSTMGTLSKAITQSSLAMDIRSSRYHDRKGLIMEIKENNKHFETHLDGLQIHHNPYAINKLSKDVFDRYEVTHYYYDIESRFIDNQQKSYTMISRSSWPSSSKTVP
>NZ_CP054143.1|WP_173533833.1|2537625_2538576_+|rhodanese-related-sulfurtransferase
MSNQNEGAIVVAALYQFVTLSDYVQLREPLLQTMLDLNVHGTLLLADEGINGTVAGTRAGIDGLLAWLRSDPRLAAVDHKESYCAEQPFLRTKVKLKKEIVTLGVPGVDPNKAVGTYVEPKDWNAIISDPEVLVIDTRNDYEVAIGTFERAIDPKTETFREFPDYVKEHFDPAVHKKVAMFCTGGIRCEKASSYMLGEGFAEVYHLKGGILKYLEEVPQEETLWKGDCFVFDNRVTVRHDLSEGDFELCHACRQPVSKEQRLSPHYVAGVSCPHCFDNLSEKTRSGALERQKQIELAKKRNQPNPLGRVIKKTSSR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	NZ_CP054143.1	1662547-1662576	0	1.0
NZ_CP054143_1	1.2\|1662619\|18\|NZ_CP054143\|CRT	1662619-1662636	18	NZ_CP054143.1	1662547-1662564	0	1.0
NZ_CP054143_1	1.4\|1662715\|18\|NZ_CP054143\|CRT	1662715-1662732	18	NZ_CP054143.1	1662535-1662552	1	0.944
NZ_CP054143_1	1.2\|1662619\|18\|NZ_CP054143\|CRT	1662619-1662636	18	NZ_CP054143.1	373728-373745	2	0.889
NZ_CP054143_1	1.2\|1662619\|18\|NZ_CP054143\|CRT	1662619-1662636	18	NZ_CP054143.1	373752-373769	2	0.889
NZ_CP054143_1	1.4\|1662715\|18\|NZ_CP054143\|CRT	1662715-1662732	18	NZ_CP054143.1	373776-373793	2	0.889
NZ_CP054143_1	1.4\|1662715\|18\|NZ_CP054143\|CRT	1662715-1662732	18	NZ_CP054143.1	893711-893728	2	0.889

1. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to position: 1662547-1662576, mismatch: 0, identity: 1.0

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
ccgacagcgacaccaactgcgacgccgaca	Protospacer
******************************

2. spacer 1.2|1662619|18|NZ_CP054143|CRT matches to position: 1662547-1662564, mismatch: 0, identity: 1.0

ccgacagcgacaccaact	CRISPR spacer
ccgacagcgacaccaact	Protospacer
******************

3. spacer 1.4|1662715|18|NZ_CP054143|CRT matches to position: 1662535-1662552, mismatch: 1, identity: 0.944

ccaactgcgaccccgaca	CRISPR spacer
ccaactgcgacgccgaca	Protospacer
*********** ******

4. spacer 1.2|1662619|18|NZ_CP054143|CRT matches to position: 373728-373745, mismatch: 2, identity: 0.889

ccgacagcgacaccaact	CRISPR spacer
ccgactgcaacaccaact	Protospacer
***** **.*********

5. spacer 1.2|1662619|18|NZ_CP054143|CRT matches to position: 373752-373769, mismatch: 2, identity: 0.889

ccgacagcgacaccaact	CRISPR spacer
ccgactgcaacaccaact	Protospacer
***** **.*********

6. spacer 1.4|1662715|18|NZ_CP054143|CRT matches to position: 373776-373793, mismatch: 2, identity: 0.889

ccaactgcgaccccgaca	CRISPR spacer
ccaactgcaacaccgaca	Protospacer
********.** ******

7. spacer 1.4|1662715|18|NZ_CP054143|CRT matches to position: 893711-893728, mismatch: 2, identity: 0.889

ccaactgcgaccccgaca	CRISPR spacer
ccaacggcgaccccaaca	Protospacer
***** ********.***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP037868	Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence	44589-44618	5	0.833
NZ_CP054143_2	2.6\|2525030\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525030-2525059	30	NZ_CP018028	Alteromonas mediterranea strain CP49 plasmid MCP49-600, complete sequence	163620-163649	5	0.833
NZ_CP054143_2	2.6\|2525030\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525030-2525059	30	NZ_CP018025	Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence	163662-163691	5	0.833
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT639643	Microbacterium phage FreddieHg, complete genome	54709-54738	5	0.833
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MN497954	Microbacterium phage Hiddenleaf, complete genome	54692-54721	5	0.833
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT684591	Microbacterium phage Chivey, complete genome	54692-54721	5	0.833
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT684592	Microbacterium phage Aesir, complete genome	54893-54922	5	0.833
NZ_CP054143_2	2.31\|2526676\|30\|NZ_CP054143\|CRISPRCasFinder,CRT,PILER-CR	2526676-2526705	30	NZ_CP040765	Paracoccus sp. 2251 plasmid unnamed1, complete sequence	172074-172103	5	0.833
NZ_CP054143_2	2.11\|2525359\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525359-2525388	30	KX397366	Erwinia phage vB_EamM_ChrisDB, complete genome	226724-226753	6	0.8
NZ_CP054143_2	2.14\|2525557\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525557-2525586	30	NZ_CP032685	Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence	875483-875512	6	0.8
NZ_CP054143_2	2.14\|2525557\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525557-2525586	30	NZ_CP032690	Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence	875003-875032	6	0.8
NZ_CP054143_2	2.19\|2525886\|28\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525886-2525913	28	NZ_CP015737	Shinella sp. HZN7 plasmid pShin-01, complete sequence	179903-179930	6	0.786
NZ_CP054143_2	2.19\|2525886\|28\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525886-2525913	28	NZ_CP029830	Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence	591025-591052	6	0.786
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT522001	Microbacterium phage Karate, complete genome	55019-55048	6	0.8
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	1639367-1639396	6	0.8
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	NC_018583	Gordonia sp. KTR9 plasmid pGKT3, complete sequence	137752-137781	7	0.767
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	NZ_CP047236	Gordonia sp. JH63 plasmid pJH63-1, complete sequence	6560-6589	7	0.767
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	MK061410	Gordonia phage Eyes, complete genome	9607-9636	7	0.767
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	MN813694	Gordonia phage Opie, complete genome	9951-9980	7	0.767
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP029209	Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence	825604-825633	7	0.767
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	MH426726	Erwinia phage Pavtok, complete genome	18849-18878	7	0.767
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NC_010510	Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence	575186-575215	7	0.767
NZ_CP054143_2	2.3\|2524832\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524832-2524861	30	JN849462	Vibriophage phi-pp2, complete genome	124629-124658	7	0.767
NZ_CP054143_2	2.3\|2524832\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524832-2524861	30	MT135024	Vibrio phage V05, complete genome	50974-51003	7	0.767
NZ_CP054143_2	2.19\|2525886\|28\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525886-2525913	28	NC_009956	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence	117822-117849	7	0.75
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP016082	Streptomyces sp. SAT1 plasmid unnamed2, complete sequence	335630-335659	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NC_018107	Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence	128084-128113	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	AP018709	Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence	28556-28585	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	44229-44258	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_MF344565	Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence	280056-280085	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_MF344564	Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence	309450-309479	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP011600	Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence	167972-168001	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP021328	Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence	387112-387141	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP026198	Enterobacteriaceae bacterium ENNIH3 plasmid pKPC-c606, complete sequence	129389-129418	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_MF344561	Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence	200987-201016	7	0.767
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_MF344562	Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence	174566-174595	7	0.767
NZ_CP054143_2	2.27\|2526412\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526412-2526441	30	NC_016623	Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence	574697-574726	7	0.767
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	MK967377	Gordonia phage MagicMan, complete genome	9943-9972	8	0.733
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	KU998235	Gordonia phage Bowser, complete genome	9599-9628	8	0.733
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	NC_031255	Gordonia phage Schwabeltier, complete genome	9944-9973	8	0.733
NZ_CP054143_1	1.1\|1662571\|30\|NZ_CP054143\|CRT	1662571-1662600	30	MH697580	Gordonia phage Catfish, complete genome	7895-7924	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP034781	Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence	46006-46035	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP011665	Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence	479896-479925	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	CP007645	Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence	146182-146211	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	772127-772156	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	764129-764158	8	0.733
NZ_CP054143_2	2.9\|2525227\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525227-2525256	30	NC_003276	Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence	83548-83577	8	0.733
NZ_CP054143_2	2.12\|2525425\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525425-2525454	30	NZ_CP046163	Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence	1105215-1105244	8	0.733
NZ_CP054143_2	2.12\|2525425\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525425-2525454	30	NZ_CP013139	Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence	311051-311080	8	0.733
NZ_CP054143_2	2.12\|2525425\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525425-2525454	30	NZ_CP046066	Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence	1288607-1288636	8	0.733
NZ_CP054143_2	2.12\|2525425\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525425-2525454	30	NZ_CP045356	Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence	471304-471333	8	0.733
NZ_CP054143_2	2.19\|2525886\|28\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525886-2525913	28	NZ_CP015007	Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence	4896-4923	8	0.714
NZ_CP054143_2	2.19\|2525886\|28\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2525886-2525913	28	NZ_CP017148	Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence	307972-307999	8	0.714
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP013482	Pandoraea apista strain DSM 16535 plasmid pPA35, complete sequence	43213-43242	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MK765595	Tortoise microvirus 43 isolate 43_SP_105, complete genome	1172-1201	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NC_005241	Cupriavidus necator H16 megaplasmid pHG1, complete sequence	212698-212727	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP024517	Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence	186378-186407	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP024497	Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence	186396-186425	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP024501	Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence	186494-186523	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP039289	Cupriavidus necator H16 plasmid pHG1, complete sequence	212697-212726	8	0.733
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP014797	Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence	176142-176171	8	0.733
NZ_CP054143_2	2.25\|2526280\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526280-2526309	30	KC170278	Uncultured bacterium plasmid pMBUI4, complete sequence	5082-5111	8	0.733
NZ_CP054143_2	2.25\|2526280\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526280-2526309	30	NZ_CP020696	Sulfitobacter sp. D7 plasmid p2SUD7, complete sequence	3886-3915	8	0.733
NZ_CP054143_2	2.25\|2526280\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526280-2526309	30	MN369765	Microbacterium phage Zanella, complete genome	13709-13738	8	0.733
NZ_CP054143_2	2.27\|2526412\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526412-2526441	30	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	199834-199863	8	0.733
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_LR594673	Variovorax sp. PBL-E5 plasmid 3	471150-471179	9	0.7
NZ_CP054143_2	2.1\|2524700\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524700-2524729	30	NZ_CP026950	Mycetocola sp. 449 strain CGMCC 1.16372 plasmid unnamed, complete sequence	23984-24013	9	0.7
NZ_CP054143_2	2.5\|2524964\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524964-2524993	30	MK514283	Pseudomonas phage vB_PaeP_TF17, complete genome	22045-22074	9	0.7
NZ_CP054143_2	2.5\|2524964\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524964-2524993	30	KU884561	Pseudomonas phage PaMx33, complete genome	22428-22457	9	0.7
NZ_CP054143_2	2.5\|2524964\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2524964-2524993	30	KU884565	Pseudomonas phage PaMx46, complete genome	22430-22459	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NZ_CP014678	Kozakia baliensis strain DSM 14400 plasmid pKB14400_4, complete sequence	260-289	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT818420	Microbacterium phage Gilda, complete genome	55301-55330	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MK737941	Microbacterium phage Rachella, complete genome	55299-55328	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MK801732	Microbacterium phage NarutoRun, complete genome	55273-55302	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	NC_047986	Microbacterium phage Krampus, complete genome	55308-55337	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MK801731	Microbacterium phage Anakin, complete genome	55273-55302	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MH271292	Microbacterium phage AnnaSerena, complete genome	55307-55336	9	0.7
NZ_CP054143_2	2.21\|2526016\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526016-2526045	30	MT522003	Microbacterium phage Rie18, complete genome	55030-55059	9	0.7
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	MN096355	Mycobacterium phage Purky, complete genome	5507-5536	9	0.7
NZ_CP054143_2	2.29\|2526544\|30\|NZ_CP054143\|CRISPRCasFinder,CRT,PILER-CR	2526544-2526573	30	MN694666	Marine virus AFVG_250M184, complete genome	5717-5746	9	0.7
NZ_CP054143_2	2.24\|2526214\|30\|NZ_CP054143\|PILER-CR,CRISPRCasFinder,CRT	2526214-2526243	30	NZ_CP006368	Aureimonas sp. AU20 plasmid pAU20a, complete sequence	74383-74412	10	0.667

1. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP037868 (Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence) position: , mismatch: 5, identity: 0.833

-cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
tcgcg-ccacggccgctgccggtgctgctgg	Protospacer
 **** * *******.*************

2. spacer 2.6|2525030|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018028 (Alteromonas mediterranea strain CP49 plasmid MCP49-600, complete sequence) position: , mismatch: 5, identity: 0.833

attcaaagagcaagacgctttgctgcaaat-	CRISPR spacer
attcaaagagcaagacgcttt-tagcgtatt	Protospacer
********************* . **. **

3. spacer 2.6|2525030|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018025 (Alteromonas mediterranea strain CP48 plasmid pAMCP48-600, complete sequence) position: , mismatch: 5, identity: 0.833

attcaaagagcaagacgctttgctgcaaat-	CRISPR spacer
attcaaagagcaagacgcttt-tagcgtatt	Protospacer
********************* . **. **

4. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT639643 (Microbacterium phage FreddieHg, complete genome) position: , mismatch: 5, identity: 0.833

tacgc-atgaactcggccagctgctcgtatt	CRISPR spacer
-acgtgatgaactcggccatctgctcgtaca	Protospacer
 ***. ************* *********.

5. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MN497954 (Microbacterium phage Hiddenleaf, complete genome) position: , mismatch: 5, identity: 0.833

tacgc-atgaactcggccagctgctcgtatt	CRISPR spacer
-acgtgatgaactcggccatctgctcgtaca	Protospacer
 ***. ************* *********.

6. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT684591 (Microbacterium phage Chivey, complete genome) position: , mismatch: 5, identity: 0.833

tacgc-atgaactcggccagctgctcgtatt	CRISPR spacer
-acgtgatgaactcggccatctgctcgtaca	Protospacer
 ***. ************* *********.

7. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT684592 (Microbacterium phage Aesir, complete genome) position: , mismatch: 5, identity: 0.833

tacgc-atgaactcggccagctgctcgtatt	CRISPR spacer
-acgtgatgaactcggccatctgctcgtaca	Protospacer
 ***. ************* *********.

8. spacer 2.31|2526676|30|NZ_CP054143|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040765 (Paracoccus sp. 2251 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.833

caagcgg---atagcaccagcgcgaatatcacg	CRISPR spacer
---gcgggcaatagcaccagcgcgaagatcaag	Protospacer
   ****   **************** **** *

9. spacer 2.11|2525359|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to KX397366 (Erwinia phage vB_EamM_ChrisDB, complete genome) position: , mismatch: 6, identity: 0.8

cgcgtttgcacaaagcaacca--attccgaat	CRISPR spacer
ggcgtttccacaaagcaaccaatatgccgg--	Protospacer
 ****** *************  ** ***.

10. spacer 2.14|2525557|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032685 (Rhizobium sp. CCGE531 plasmid pRCCGE531d, complete sequence) position: , mismatch: 6, identity: 0.8

tgct-tatggtgcggcccgaggccatttggt	CRISPR spacer
-gctgcgcggtgcggccagaggccatatggt	Protospacer
 *** ...********* ******** ****

11. spacer 2.14|2525557|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032690 (Rhizobium sp. CCGE532 plasmid pRCCGE532d, complete sequence) position: , mismatch: 6, identity: 0.8

tgct-tatggtgcggcccgaggccatttggt	CRISPR spacer
-gctgcgcggtgcggccagaggccatatggt	Protospacer
 *** ...********* ******** ****

12. spacer 2.19|2525886|28|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015737 (Shinella sp. HZN7 plasmid pShin-01, complete sequence) position: , mismatch: 6, identity: 0.786

ggaccaagccagcacggcgaccgcctct	CRISPR spacer
cgcgcgcgccagcacggcgaccgcctcg	Protospacer
 *  *. ********************

13. spacer 2.19|2525886|28|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029830 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.786

ggaccaagccagcacggcgaccgcctct	CRISPR spacer
gaatttcgccagcacggcgaccgcttct	Protospacer
*.*..  *****************.***

14. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT522001 (Microbacterium phage Karate, complete genome) position: , mismatch: 6, identity: 0.8

tacgc-atgaactcggccagctgctcgtatt	CRISPR spacer
-acgtgataaactcggccatctgctcgtaca	Protospacer
 ***. **.********** *********.

15. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 6, identity: 0.8

tgtgtgttgatcggcgtgatcgg--ggctgcg	CRISPR spacer
tgggtgttgatcggggtgatcggctggccc--	Protospacer
** *********** ********  ***.

16. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to NC_018583 (Gordonia sp. KTR9 plasmid pGKT3, complete sequence) position: , mismatch: 7, identity: 0.767

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
tgggcagcgacaccacctccgacgccgtcg	Protospacer
. *.*********** ** ******** *.

17. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to NZ_CP047236 (Gordonia sp. JH63 plasmid pJH63-1, complete sequence) position: , mismatch: 7, identity: 0.767

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
tgggcagcgacaccacctccgacgccgtcg	Protospacer
. *.*********** ** ******** *.

18. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to MK061410 (Gordonia phage Eyes, complete genome) position: , mismatch: 7, identity: 0.767

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
gcaccggcgccaccaaccgcgacgccgacg	Protospacer
 *. *.*** *******.***********.

19. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to MN813694 (Gordonia phage Opie, complete genome) position: , mismatch: 7, identity: 0.767

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
gcaccggcgccaccaaccgcgacgccgacg	Protospacer
 *. *.*** *******.***********.

20. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029209 (Nitratireductor sp. OM-1 plasmid pOM-1, complete sequence) position: , mismatch: 7, identity: 0.767

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
actcaggacagccgttgccggcgctgcttt	Protospacer
  . * ***.***********.********

21. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MH426726 (Erwinia phage Pavtok, complete genome) position: , mismatch: 7, identity: 0.767

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacggcggccgttgccggtaccgtggc	Protospacer
*******.**************.*.*.  .

22. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_010510 (Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete sequence) position: , mismatch: 7, identity: 0.767

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cccaacgacggccgtcgccggtgcggcacc	Protospacer
* *.***********.******** ** ..

23. spacer 2.3|2524832|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to JN849462 (Vibriophage phi-pp2, complete genome) position: , mismatch: 7, identity: 0.767

ttctctagcagagagcattcaactaaaacg	CRISPR spacer
tcacagagcagagatcattcaattaaaacg	Protospacer
*. .  ******** *******.*******

24. spacer 2.3|2524832|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT135024 (Vibrio phage V05, complete genome) position: , mismatch: 7, identity: 0.767

ttctctagcagagagcattcaactaaaacg	CRISPR spacer
tcacagagcagagatcattcaattaaaacg	Protospacer
*. .  ******** *******.*******

25. spacer 2.19|2525886|28|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_009956 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI02, complete sequence) position: , mismatch: 7, identity: 0.75

ggaccaagccagcacggcgaccgcctct	CRISPR spacer
tgaccaagccatcgcggcgaccgcaagg	Protospacer
 ********** *.**********

26. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016082 (Streptomyces sp. SAT1 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
tgagggggaactcggccaggtgctcgtagt	Protospacer
*. * . ************ ******** *

27. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_018107 (Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

28. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to AP018709 (Uncultured bacterium plasmid pSN1104-59 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

29. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026014 (Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

30. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344565 (Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

31. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344564 (Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

32. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011600 (Phytobacter ursingii strain CAV1151 plasmid pCAV1151-215, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

33. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021328 (Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

34. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026198 (Enterobacteriaceae bacterium ENNIH3 plasmid pKPC-c606, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

35. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344561 (Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

36. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344562 (Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence) position: , mismatch: 7, identity: 0.767

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
cttggctccatcggcgtgatcggagctgcg	Protospacer
. **  *. **************.******

37. spacer 2.27|2526412|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 7, identity: 0.767

-gtaatgaccggcaccgagcgccacacgtcg	CRISPR spacer
cgcggcg-ccggcaccgagcgccacgcctcg	Protospacer
 *....* *****************.* ***

38. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to MK967377 (Gordonia phage MagicMan, complete genome) position: , mismatch: 8, identity: 0.733

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
gcactggcgccaccaaccgcgacgccgacg	Protospacer
 *. ..*** *******.***********.

39. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to KU998235 (Gordonia phage Bowser, complete genome) position: , mismatch: 8, identity: 0.733

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
gcactggcgccaccaaccgcgacgccgacg	Protospacer
 *. ..*** *******.***********.

40. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to NC_031255 (Gordonia phage Schwabeltier, complete genome) position: , mismatch: 8, identity: 0.733

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
gcactggcgccaccaaccgcgacgccgacg	Protospacer
 *. ..*** *******.***********.

41. spacer 1.1|1662571|30|NZ_CP054143|CRT matches to MH697580 (Gordonia phage Catfish, complete genome) position: , mismatch: 8, identity: 0.733

ccgacagcgacaccaactgcgacgccgaca	CRISPR spacer
aggatgcggacaccaacggcgacgccgacg	Protospacer
  **..  ********* ***********.

42. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034781 (Pseudomonas sp. MPC6 plasmid pMPC6-47K, complete sequence) position: , mismatch: 8, identity: 0.733

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
tcaggctggggccggtgccggtgctgcttt	Protospacer
.  *.* . ***** ***************

43. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011665 (Streptomyces sp. Mg1 plasmid pSMg1-1, complete sequence) position: , mismatch: 8, identity: 0.733

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
ggcggcgacggccgtggccggtgcgacggg	Protospacer
 ***.********** ******** .*

44. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to CP007645 (Rhizobium etli bv. phaseoli str. IE4803 plasmid pRetIE4803d, complete sequence) position: , mismatch: 8, identity: 0.733

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacgacgaccattgccggtgaatacct	Protospacer
**********.**.*********    ..*

45. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 8, identity: 0.733

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacgacggccattgcccgtgaacacct	Protospacer
*************.***** ***    ..*

46. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 8, identity: 0.733

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacgacggccattgcctgtgaacacct	Protospacer
*************.***** ***    ..*

47. spacer 2.9|2525227|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_003276 (Nostoc sp. PCC 7120 = FACHB-418 plasmid pCC7120alpha, complete sequence) position: , mismatch: 8, identity: 0.733

gaatcgtcacagcttccgtgccaaagcaca	CRISPR spacer
aaaaaatcacagcttccgtgccatagccgt	Protospacer
.**  .***************** ***

48. spacer 2.12|2525425|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046163 (Vibrio sp. THAF191c plasmid pTHAF191c_b, complete sequence) position: , mismatch: 8, identity: 0.733

ttggcgaattaaaccaaggcaaacacctga	CRISPR spacer
aacaagcattaaaccaaggccaaaacctga	Protospacer
   . * ************* ** ******

49. spacer 2.12|2525425|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013139 (Pseudoalteromonas sp. Bsw20308 plasmid pPBSW1, complete sequence) position: , mismatch: 8, identity: 0.733

ttggcgaattaaaccaaggcaaacacctga	CRISPR spacer
cgggaatattaaaccaaggcaaacaactat	Protospacer
. ** . ****************** **.

50. spacer 2.12|2525425|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046066 (Vibrio sp. THAF191d plasmid pTHAF191d_b, complete sequence) position: , mismatch: 8, identity: 0.733

ttggcgaattaaaccaaggcaaacacctga	CRISPR spacer
aacaagcattaaaccaaggccaaaacctga	Protospacer
   . * ************* ** ******

51. spacer 2.12|2525425|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045356 (Vibrio sp. THAF64 plasmid pTHAF64_a, complete sequence) position: , mismatch: 8, identity: 0.733

ttggcgaattaaaccaaggcaaacacctga	CRISPR spacer
aacaagcattaaaccaaggccaaaacctga	Protospacer
   . * ************* ** ******

52. spacer 2.19|2525886|28|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015007 (Aminobacter aminovorans strain KCTC 2477 plasmid pAA02, complete sequence) position: , mismatch: 8, identity: 0.714

ggaccaagccagcacggcgaccgcctct	CRISPR spacer
tccgcaagccagcacggcgaccgcggtc	Protospacer
    ********************  ..

53. spacer 2.19|2525886|28|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017148 (Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.714

ggaccaagccagcacggcgaccgcctct	CRISPR spacer
catgcaggccagcacggcgaccgccagg	Protospacer
 .  **.******************

54. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013482 (Pandoraea apista strain DSM 16535 plasmid pPA35, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cttgcttgaactcggccagcagctcgtccg	Protospacer
. .** ************** ****** .

55. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MK765595 (Tortoise microvirus 43 isolate 43_SP_105, complete genome) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cacgcatgaactccggcagctgctcaaccg	Protospacer
.************ * *********.  .

56. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_005241 (Cupriavidus necator H16 megaplasmid pHG1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
gtcccatgaactcggcgagctcctcgtggc	Protospacer
  * ************ **** *****. .

57. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024517 (Klebsiella pneumoniae strain KSB1_10J plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
ggttctggaactcggccagctgatcgcatt	Protospacer
 .. *  *************** ***.***

58. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024497 (Klebsiella pneumoniae strain KSB1_7E plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
ggttctggaactcggccagctgatcgcatt	Protospacer
 .. *  *************** ***.***

59. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024501 (Klebsiella pneumoniae strain KSB1_4E plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
ggttctggaactcggccagctgatcgcatt	Protospacer
 .. *  *************** ***.***

60. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039289 (Cupriavidus necator H16 plasmid pHG1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
gtcccatgaactcggcgagctcctcgtggc	Protospacer
  * ************ **** *****. .

61. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014797 (Salipiger profundus strain JLT2016 plasmid pTPRO1, complete sequence) position: , mismatch: 8, identity: 0.733

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cgcccatgcactcggccagccgctcgttca	Protospacer
..* **** ***********.****** .

62. spacer 2.25|2526280|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to KC170278 (Uncultured bacterium plasmid pMBUI4, complete sequence) position: , mismatch: 8, identity: 0.733

ggcggcggtgagtttacccagtgccatttt	CRISPR spacer
ggcggcggtgactttagccagtgcttgacg	Protospacer
*********** **** *******.   .

63. spacer 2.25|2526280|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020696 (Sulfitobacter sp. D7 plasmid p2SUD7, complete sequence) position: , mismatch: 8, identity: 0.733

ggcggcggtgagtttacccagtgccatttt	CRISPR spacer
ggcggcggtcagtttactcagtgtgttgcg	Protospacer
********* *******.*****.  * .

64. spacer 2.25|2526280|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MN369765 (Microbacterium phage Zanella, complete genome) position: , mismatch: 8, identity: 0.733

ggcggcggtgagtttacccagtgccatttt	CRISPR spacer
caccgcgttgaggttacccagtgccatggc	Protospacer
 .* *** **** **************  .

65. spacer 2.27|2526412|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.733

gtaatgaccggcaccgagcgccacacgtcg	CRISPR spacer
cgcggggccggcaccgagcgccacgcctcg	Protospacer
   . *.*****************.* ***

66. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594673 (Variovorax sp. PBL-E5 plasmid 3) position: , mismatch: 9, identity: 0.7

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacgagggccgttggcggtgtgcgagc	Protospacer
******** ******** *****.     .

67. spacer 2.1|2524700|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026950 (Mycetocola sp. 449 strain CGMCC 1.16372 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

cgcgacgacggccgttgccggtgctgcttt	CRISPR spacer
cgcgacgacggccgtggccggggtccagaa	Protospacer
*************** ***** *..

68. spacer 2.5|2524964|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MK514283 (Pseudomonas phage vB_PaeP_TF17, complete genome) position: , mismatch: 9, identity: 0.7

ccgtgagcttggtagggttagcaacaaagt	CRISPR spacer
acgtgaacttggtaggcttagcaatctccc	Protospacer
 *****.********* *******.    .

69. spacer 2.5|2524964|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to KU884561 (Pseudomonas phage PaMx33, complete genome) position: , mismatch: 9, identity: 0.7

ccgtgagcttggtagggttagcaacaaagt	CRISPR spacer
acgtgaacttggtaggcttagcaatctccc	Protospacer
 *****.********* *******.    .

70. spacer 2.5|2524964|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to KU884565 (Pseudomonas phage PaMx46, complete genome) position: , mismatch: 9, identity: 0.7

ccgtgagcttggtagggttagcaacaaagt	CRISPR spacer
acgtgaacttggtaggcttagcaatctccc	Protospacer
 *****.********* *******.    .

71. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014678 (Kozakia baliensis strain DSM 14400 plasmid pKB14400_4, complete sequence) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cctgcatgaactccgccacctgctcggggg	Protospacer
. .********** **** ******* .

72. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT818420 (Microbacterium phage Gilda, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

73. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MK737941 (Microbacterium phage Rachella, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

74. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MK801732 (Microbacterium phage NarutoRun, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

75. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NC_047986 (Microbacterium phage Krampus, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

76. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MK801731 (Microbacterium phage Anakin, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

77. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MH271292 (Microbacterium phage AnnaSerena, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
cggtgatgaactcagccatctgctcgtaca	Protospacer
..   ********.**** *********.

78. spacer 2.21|2526016|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MT522003 (Microbacterium phage Rie18, complete genome) position: , mismatch: 9, identity: 0.7

tacgcatgaactcggccagctgctcgtatt	CRISPR spacer
ccgtgatgaactcagccatctgctcgtaca	Protospacer
.    ********.**** *********.

79. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to MN096355 (Mycobacterium phage Purky, complete genome) position: , mismatch: 9, identity: 0.7

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
ccggtgctgatcggcgtgatcgggtactca	Protospacer
.  ***.*****************  . *.

80. spacer 2.29|2526544|30|NZ_CP054143|CRISPRCasFinder,CRT,PILER-CR matches to MN694666 (Marine virus AFVG_250M184, complete genome) position: , mismatch: 9, identity: 0.7

ttgacaatggcgattgaggaaaaaggtttt	CRISPR spacer
accacaacggctattgaggaaaaaggaccc	Protospacer
 . ****.*** ************** ...

81. spacer 2.24|2526214|30|NZ_CP054143|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP006368 (Aureimonas sp. AU20 plasmid pAU20a, complete sequence) position: , mismatch: 10, identity: 0.667

tgtgtgttgatcggcgtgatcggggctgcg	CRISPR spacer
gccaccgtgctcggcgtgatcggggctggc	Protospacer
  ...  ** ******************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

3645 : 12968

Burkholderia_virus(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173531761.1\|3645_4020_-	hypothetical protein	A0A0R6PCH4	Moraxella_phage	1.5e-12	36.9
WP_173531762.1\|4042_4369_-	hypothetical protein	A0A0R6PCH4	Moraxella_phage	4.9e-23	49.0
WP_173531763.1\|4468_5119_-	hypothetical protein	NA	NA	NA	NA
WP_173531764.1\|5163_5634_-	hypothetical protein	B7SYD0	Stenotrophomonas_phage	2.7e-06	33.8
WP_173531765.1\|6023_6365_+	hypothetical protein	NA	NA	NA	NA
WP_173531766.1\|6350_6536_-	hypothetical protein	NA	NA	NA	NA
WP_173531767.1\|6532_6739_-	hypothetical protein	NA	NA	NA	NA
WP_173531768.1\|6871_7324_-	phage regulatory CII family protein	Q8W6P5	Burkholderia_virus	2.1e-24	42.5
WP_173531769.1\|7435_7714_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_173531770.1\|7789_8524_+	helix-turn-helix transcriptional regulator	X4YTE2	Pseudomonas_phage	1.6e-16	31.2
WP_173531771.1\|8821_9154_+	hypothetical protein	C5IHK2	Burkholderia_virus	4.5e-08	34.4
WP_173531772.1\|9161_10007_+	DUF2303 family protein	C5IHK3	Burkholderia_virus	1.4e-29	31.1
WP_173531773.1\|10117_10294_+	hypothetical protein	NA	NA	NA	NA
WP_173531774.1\|10290_10500_+	hypothetical protein	NA	NA	NA	NA
WP_173531775.1\|10486_10930_+	hypothetical protein	NA	NA	NA	NA
WP_173531776.1\|10926_11181_+	pyocin activator PrtN family protein	A0A1D9C9N7	Salinivibrio_phage	2.5e-14	44.3
WP_173531777.1\|11399_11633_+	hypothetical protein	NA	NA	NA	NA
WP_173531778.1\|11638_12238_+	hypothetical protein	NA	NA	NA	NA
WP_173531779.1\|12401_12968_+	3'-5' exonuclease	A2I2Z6	Vibrio_virus	7.7e-24	42.9

DBSCAN-SWA_2

1622725 : 1630613

Agrotis_segetum_nucleopolyhedrovirus(14.29%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173533117.1\|1622725_1623790_+	glycoside hydrolase family 18 protein	A0A0A7KRB6	Agrotis_segetum_nucleopolyhedrovirus	2.8e-35	32.2
WP_173533118.1\|1623857_1624343_+	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	1.6e-14	40.5
WP_173534642.1\|1624356_1625262_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.3e-25	28.1
WP_173533119.1\|1625336_1626167_+	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_173533120.1\|1626243_1628508_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.1e-177	44.3
WP_173533121.1\|1628504_1628816_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.7e-12	43.4
WP_173533122.1\|1629055_1629259_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	8.3e-21	74.2
WP_173533123.1\|1629389_1630613_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-09	61.1

DBSCAN-SWA_3

2294374 : 2304546

Prochlorococcus_phage(14.29%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173533636.1\|2294374_2295295_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-07	30.5
WP_173533637.1\|2295375_2295879_-	peptide deformylase	Q6VSW0	Vibrio_phage	6.2e-17	43.0
WP_173533638.1\|2296049_2297117_+	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	8.3e-11	56.2
WP_173534686.1\|2297116_2298229_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	3.2e-29	33.9
WP_173533639.1\|2298237_2298696_+	DUF494 domain-containing protein	NA	NA	NA	NA
WP_173533640.1\|2298749_2301044_+	type I DNA topoisomerase	A0A0G2Y787	Acanthamoeba_polyphaga_mimivirus	9.2e-100	37.2
WP_173533641.1\|2301221_2303738_+	EAL domain-containing protein	A0A127AWB9	Bacillus_phage	1.9e-13	29.2
WP_173533642.1\|2303817_2304546_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.5e-27	37.0

DBSCAN-SWA_4

2831052 : 2842376

Acinetobacter_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173534101.1\|2831052_2832294_+	tyrosine-protein phosphatase	S4VYT2	Pandoravirus	5.0e-07	39.8
WP_173531757.1\|2832412_2833288_+	hypothetical protein	NA	NA	NA	NA
WP_173534102.1\|2833433_2834243_-	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	5.4e-55	49.2
WP_173534103.1\|2834350_2835376_-	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	1.3e-85	48.7
WP_173534104.1\|2835463_2836033_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.9e-75	67.5
WP_173534105.1\|2836082_2836475_-	GxxExxY protein	M4QQ10	Micromonas_pusilla_virus	6.6e-06	32.3
WP_173534106.1\|2836486_2837956_-	anthranilate synthase component I	A0A0B5J984	Pandoravirus	4.6e-36	31.2
WP_173534107.1\|2838327_2839008_-	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_173534108.1\|2839052_2839391_-	arsenate reductase	NA	NA	NA	NA
WP_173534109.1\|2839390_2840068_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_173534110.1\|2840223_2840601_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_173534111.1\|2840600_2842376_+	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	4.3e-44	27.5

DBSCAN-SWA_5

3319801 : 3369334

Burkholderia_phage(21.74%)

tail,holin,capsid,tRNA,plate,head,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_173534493.1\|3319801_3321046_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_173534745.1\|3321141_3323664_+	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	4.2e-29	24.5
WP_173534494.1\|3323779_3324211_+	hypothetical protein	NA	NA	NA	NA
WP_173534495.1\|3324321_3325578_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_173534496.1\|3325635_3326202_+	transcription elongation factor GreB	NA	NA	NA	NA
WP_173534497.1\|3326359_3328453_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_173534498.1\|3328518_3329340_+	thymidylate synthase	A6M9A2	Geobacillus_virus	7.1e-103	63.0
WP_173534499.1\|3329505_3330765_-	D-amino acid dehydrogenase	NA	NA	NA	NA
WP_173534500.1\|3330968_3332813_+	PAS domain-containing protein	NA	NA	NA	NA
WP_173534501.1\|3332892_3333933_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	1.2e-110	62.2
WP_173534502.1\|3334020_3334494_+	recombination regulator RecX	NA	NA	NA	NA
WP_173534503.1\|3334592_3334925_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_173534504.1\|3334980_3335304_-	nitrite reductase small subunit NirD	NA	NA	NA	NA
WP_173534505.1\|3335388_3337929_-	nitrite reductase large subunit	NA	NA	NA	NA
WP_173534506.1\|3338281_3339685_-	MFS transporter	NA	NA	NA	NA
WP_173534746.1\|3340025_3340676_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_173534507.1\|3340853_3341084_-	hypothetical protein	NA	NA	NA	NA
WP_173534508.1\|3341199_3341556_-	cupin domain-containing protein	NA	NA	NA	NA
WP_173534509.1\|3341669_3342344_-	hypothetical protein	NA	NA	NA	NA
WP_173534510.1\|3342507_3343119_-	LysE family translocator	NA	NA	NA	NA
WP_173534511.1\|3343637_3344072_-	M15 family metallopeptidase	A0A0H3V0Q8	Geobacillus_virus	1.5e-11	36.0
WP_173534747.1\|3344408_3346973_-	AAA family ATPase	NA	NA	NA	NA
WP_173534512.1\|3347306_3347591_-	hypothetical protein	A0A2D1GMX8	Marinobacter_phage	1.0e-08	35.6
WP_173534513.1\|3348450_3349251_-	DNA adenine methylase	Q5ZQW7	Pseudomonas_phage	8.2e-104	66.0
WP_173534514.1\|3349213_3349408_-	Com family DNA-binding transcriptional regulator	A0A1S5NPS9	Burkholderia_phage	1.3e-07	60.5
WP_173534515.1\|3349588_3350155_-	hypothetical protein	NA	NA	NA	NA
WP_173534516.1\|3350151_3350586_-	M15 family metallopeptidase	NA	NA	NA	NA
WP_173534517.1\|3350648_3350930_-\|holin	holin	C7BGD7	Burkholderia_phage	1.5e-23	57.6
WP_173534518.1\|3350936_3351506_-	hypothetical protein	D2K0C9	Staphylococcus_phage	5.1e-07	30.3
WP_173534519.1\|3351514_3352258_-	DUF4376 domain-containing protein	Q9LA61	Enterobacterial_phage	9.5e-22	47.6
WP_173534520.1\|3354464_3355046_-\|tail	phage tail protein I	A4JWL7	Burkholderia_virus	2.9e-50	55.9
WP_173534521.1\|3355038_3356163_-\|plate	baseplate J/gp47 family protein	Q6QI99	Burkholderia_phage	6.8e-72	42.7
WP_173534522.1\|3356155_3356521_-	GPW/gp25 family protein	NA	NA	NA	NA
WP_173534523.1\|3356526_3357573_-	hypothetical protein	A4JWL3	Burkholderia_virus	7.5e-65	40.2
WP_173534524.1\|3357560_3357782_-\|tail	tail protein X	A4JWL2	Burkholderia_virus	4.1e-13	46.5
WP_173534525.1\|3357781_3358327_-\|tail	phage tail protein	Q6QIA4	Burkholderia_phage	3.1e-30	48.8
WP_173534526.1\|3358326_3360582_-\|tail	phage tail tape measure protein	E5FFG5	Burkholderia_phage	2.2e-106	53.9
WP_173534527.1\|3360752_3361046_-	hypothetical protein	NA	NA	NA	NA
WP_173534528.1\|3361046_3361562_-\|tail	phage major tail tube protein	A4JWK6	Burkholderia_virus	2.0e-42	48.2
WP_173534529.1\|3361574_3362993_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A4JWK5	Burkholderia_virus	3.8e-144	55.3
WP_173534530.1\|3362982_3363216_-	hypothetical protein	NA	NA	NA	NA
WP_173534531.1\|3363212_3363752_-	hypothetical protein	NA	NA	NA	NA
WP_173534532.1\|3363708_3364080_-	hypothetical protein	NA	NA	NA	NA
WP_173534533.1\|3364076_3364283_-	hypothetical protein	NA	NA	NA	NA
WP_173534534.1\|3364293_3365313_-\|capsid	major capsid protein	V5Q8G6	Xylella_phage	7.1e-60	37.8
WP_173534535.1\|3365325_3365685_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	1.2e-19	57.3
WP_173534536.1\|3365688_3366951_-	S49 family peptidase	G8DCP1	Silicibacter_phage	1.8e-41	37.0
WP_173534537.1\|3367170_3367773_-\|plate	phage baseplate assembly protein V	A0A1S6KZX7	Salmonella_phage	3.7e-08	28.9
WP_173534538.1\|3367765_3369334_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	6.3e-84	36.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP054143

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection