CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP054205	Pseudomonas rhodesiae strain NL2019 chromosome, complete genome	5 crisprs	DEDDh,DinG,csa3,cas3,WYL,PD-DExK	0	0	8	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054205_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054205_1

1391178-1391277

Orphan

Consensus_repeat	Method
ACTGGCCTGACGGATGTACTCGCTTCAACGGTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054205_1

>merge|NZ_CP054205|1|1391178-1391277|CRISPRCasFinder
ACTGGCCTGACGGATGTACTCGCTTCAACGGTGGTAGGGGGCAAGCCCTTCCCACATTGGAATGATACTGGCCTGACGGATGTACTCGCTTCAACTGTGG

>NZ_CP054205|1|1|1391178-1391277|CRISPRCasFinder
ACTGGCCTGACGGATGTACTCGCTTCAACGGTGG	TAGGGGGCAAGCCCTTCCCACATTGGAATGAT
ACTGGCCTGACGGATGTACTCGCTTCAACTGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054205.1\|WP_167417230.1\|1390146_1390908_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP054205.1\|WP_167417231.1\|1386550_1387882_+\|amidase	unknown	unknown	gnl\|CDD\|235698
NZ_CP054205.1\|WP_034137133.1\|1393421_1394600_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270306
NZ_CP054205.1\|WP_034096065.1\|1387893_1388772_+\|polysaccharide-deacetylase	unknown	unknown	gnl\|CDD\|200563
NZ_CP054205.1\|WP_034096073.1\|1397341_1398019_+\|methylamine-utilization-protein	unknown	unknown	gnl\|CDD\|259883
NZ_CP054205.1\|WP_040267372.1\|1388795_1390136_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929
NZ_CP054205.1\|WP_034096069.1\|1392154_1392454_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_034096077.1\|1402204_1402711_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_167417233.1\|1381458_1382106_-\|lysoplasmalogenase	unknown	unknown	gnl\|CDD\|377946
NZ_CP054205.1\|WP_167417227.1\|1398002_1400354_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP054205.1\|WP_167417229.1\|1392450_1393425_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP054205.1\|WP_167417320.1\|1400391_1401222_+\|DUF3034-family-protein	unknown	unknown	gnl\|CDD\|378607
NZ_CP054205.1\|WP_034111902.1\|1391391_1392141_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP054205.1\|WP_034137127.1\|1382686_1385107_-\|endopeptidase-La	unknown	unknown	gnl\|CDD\|223542
NZ_CP054205.1\|WP_034137128.1\|1385224_1386214_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224715
NZ_CP054205.1\|WP_169867551.1\|1401218_1401641_+\|group-1-truncated-hemoglobin	unknown	unknown	gnl\|CDD\|381253
NZ_CP054205.1\|WP_034137125.1\|1379996_1380740_-\|carboxy-S-adenosyl-L-methionine-synthase-CmoA	unknown	unknown	gnl\|CDD\|273244
NZ_CP054205.1\|WP_167417228.1\|1394810_1397147_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP054205.1\|WP_167417234.1\|1380892_1381297_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_034096061.1\|1382107_1382497_-\|protease-inhibitor-I42-family-protein	unknown	unknown	gnl\|CDD\|378179

Protein	Function_ID	Function_description	E-value
NZ_CP054205.1\|WP_167417230.1\|1390146_1390908_+\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	1.26765e-74
NZ_CP054205.1\|WP_167417231.1\|1386550_1387882_+\|amidase	gnl\|CDD\|235698	PRK06102, PRK06102, amidase.	0
NZ_CP054205.1\|WP_034137133.1\|1393421_1394600_+\|extracellular-solute-binding-protein	gnl\|CDD\|270306	cd13588, PBP2_polyamine_1, The periplasmic-binding component of an uncharacterized ABC transporter involved in uptake of polyamines; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that functions as the primary high-affinity receptor of an uncharactertized ABC-type polyamine transport system. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.528e-16
NZ_CP054205.1\|WP_034096065.1\|1387893_1388772_+\|polysaccharide-deacetylase	gnl\|CDD\|200563	cd10938, CE4_HpPgdA_like, Catalytic domain of Helicobacter pylori peptidoglycan deacetylase (HpPgdA) and similar proteins. This family is represented by a peptidoglycan deacetylase (HP0310, HpPgdA) from the gram-negative pathogen Helicobacter pylori. HpPgdA has the ability to bind a metal ion at the active site and is responsible for a peptidoglycan modification that counteracts the host immune response. It functions as a homotetramer. The monomer is composed of a 7-stranded barrel with detectable sequence similarity to the 6-stranded barrel NodB homology domain of polysaccharide deacetylase (DCA)-like proteins in the CE4 superfamily, which removes N-linked or O-linked acetyl groups from cell wall polysaccharides. In contrast to typical NodB-like DCAs, HpPgdA does not exhibit a solvent-accessible polysaccharide binding groove, suggesting that the enzyme binds a small molecule at the active site.	6.31834e-144
NZ_CP054205.1\|WP_034096073.1\|1397341_1398019_+\|methylamine-utilization-protein	gnl\|CDD\|259883	cd04221, MauL, Methylamine utilization protein MauL. MauL is one of the products from the methylamine utilization gene cluster in Methylobacterium extorquens AM1. Mutants generated by insertions in mauL were not able to grow on methylamine or any other primary amine as carbon sources. MauL belongs to the blue or type I copper protein family. They are involved in electron transfer reactions with the Cu center transitioning between the oxidized Cu(II) form and the reduced Cu(I) form.	5.25388e-36
NZ_CP054205.1\|WP_040267372.1\|1388795_1390136_+\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.34588e-89
NZ_CP054205.1\|WP_167417233.1\|1381458_1382106_-\|lysoplasmalogenase	gnl\|CDD\|377946	pfam07947, YhhN, YhhN family. The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.	1.02585e-31
NZ_CP054205.1\|WP_167417227.1\|1398002_1400354_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	7.88949e-100
NZ_CP054205.1\|WP_167417229.1\|1392450_1393425_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	5.72294e-77
NZ_CP054205.1\|WP_167417320.1\|1400391_1401222_+\|DUF3034-family-protein	gnl\|CDD\|378607	pfam11231, DUF3034, Protein of unknown function (DUF3034). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.1755e-145
NZ_CP054205.1\|WP_034111902.1\|1391391_1392141_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	9.20399e-76
NZ_CP054205.1\|WP_034137127.1\|1382686_1385107_-\|endopeptidase-La	gnl\|CDD\|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP054205.1\|WP_034137128.1\|1385224_1386214_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	1.04089e-22
NZ_CP054205.1\|WP_169867551.1\|1401218_1401641_+\|group-1-truncated-hemoglobin	gnl\|CDD\|381253	cd00454, TrHb1_N, truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 1 (N). The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. They are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). Typical of the TrHb1s (N) group is a protein matrix tunnel. It includes a Mycobacterium tuberculosis TrHb1, Mt-trHbN, which is encoded by the glbN gene. Mt-trHbN is expressed during the Mycobacterium stationary phase, and plays a specific defense role against nitrosative stress. The cyanobacterium Synechococcus sp. PCC 7002 TrHb1 GlbN, is constitutively expressed, and likely also protects cells from reactive nitrogen species.	1.29622e-39
NZ_CP054205.1\|WP_034137125.1\|1379996_1380740_-\|carboxy-S-adenosyl-L-methionine-synthase-CmoA	gnl\|CDD\|273244	TIGR00740, tRNA_cmo5U34-methyltransferase, tRNA (cmo5U34)-methyltransferase. This tRNA methyltransferase is involved, together with cmoB, in preparing the uridine-5-oxyacetic acid (cmo5U) at position 34. [Unknown function, Enzymes of unknown specificity].	3.38715e-97
NZ_CP054205.1\|WP_167417228.1\|1394810_1397147_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.58401e-98
NZ_CP054205.1\|WP_034096061.1\|1382107_1382497_-\|protease-inhibitor-I42-family-protein	gnl\|CDD\|378179	pfam09394, Inhibitor_I42, Chagasin family peptidase inhibitor I42. Chagasin is a cysteine peptidase inhibitor which forms a beta barrel structure.	2.39158e-27

>NZ_CP054205.1|WP_167417230.1|1390146_1390908_+|SDR-family-oxidoreductase
MNRKVALITGAASGIGQALAVAYARNGVTVVGGYFPADPHDPQITVSLVQEAGGVCLMLPLDVGNTASVDALAAQAVQHFGRLDYAVANAGLLRRAPLLDMTDALWDEMLNVDLTGVMRTFRAASRHMNEGGALVAISSIAGGVYGWQDHSHYAAAKAGVPGLCRSLAVELAPLGIRCNAVIPGLIETPQSLDAKNSLGPEGLAKAARAIPLGRVGRADEVASLVQFLTSDASSYLTGQSIVIDGGLTVRWPD
>NZ_CP054205.1|WP_040267372.1|1388795_1390136_+|MFS-transporter
MSIYNKLDLTGWKPRQLTSQEVRFATWIAFFAWVFAVYDFILFGTLLPEIGRHFGWGEVEQAEIATWVAVGTAVVALAIGPIVDKLGRRKGIIFTVAGSALCSALTAIGGAWGKSPLILIRSLGGLGYAEETVNATYLTELYGASEDPRLTKRRGFIYSLVQGGWPVGALIAAGLTALLLPIIGWQGCFIFAAIPAIVIAIMARKLKESPQFQIHQRISELRKSGAVIEAQNVAATYGVDYDEHSKAGLKAAFRGPARRATLVIGAALLLNWAAIQVFSVLGTSVIVSVHHISFENSLIILVLSNLVGYCGYLSHGWMGDKIGRRNVIGLGWMLGGLSFAGMLFGPSNMAMVVGLYSLGLFFLIGPYSAALFFISESFPTSIRATGGAIIHAMGPIGAVVAGFGATQVLSAGSDWQTAALWFGAVPCFLSGALMFAARHVRPETVQ
>NZ_CP054205.1|WP_034096065.1|1387893_1388772_+|polysaccharide-deacetylase
MAKDILCAFGVDVDAVAGWLGSYGGEDSPDDISRGLFAGEVGAPRLLKLFERYGLRTTWFIPGHSMETFPEQMKAVADAGHEIGVHGYSHENPIAMTAEQEEIVLDKSIELITQVTGKRPTGYVAPWWEFSKVTNELLLKKGIKYDHSLMHNDFHPYYVRKGDSWTKIDYSQHPDTWMKPLVRGEETDLVEIPANWYLDDLPPMMFIKKAPNSHGFVNPRHLEEMWRDQFDWVYREHEHAVFTMTIHPDVSGRPQVLLMLERLIEHIQSHAGVRFVTFDEIADDFIRRQPRS
>NZ_CP054205.1|WP_167417231.1|1386550_1387882_+|amidase
MSDATSMAEDFAHGRSDPVQALEHSLDLARRSSSVFISLTADRARREAEAAAARWRAGQPLSPFDGVPLAWKDLFDMAGSVTTAGAAYRRNAPAAALDAPVVGLLCRAGMVSVGKTNLSELAYSGLGLNPHFGTPHNPHASDQPRIPGGSSSGSAVAVAAGIVPIAMGTDTAGSIRIPSAFNGLVGYRSSIRRYNRDGVFPLARTLDSLGPLTRSVRDALTLDDILHGRTHTHTARSLKGQRFVLEHSVLSHVEPAVGNNLLRAVEQLKAAGALIENRESPTFKGALELIHQHGWLGAFEAFALHQALLDSADAAQLDPRVRRRLETARGLPASQLIGLIEARQRLQLQLVDDLDGAILITPTVAHVAPALVPLEADDDLFATTNLATLRLTMPGSLLDMPGVTLPSGRDALGLPTGMLLSAPMGEDARLLRAALSVESVLNV
>NZ_CP054205.1|WP_034137128.1|1385224_1386214_-|GntR-family-transcriptional-regulator
MKAASASASRYAMIHQVLRDAIVNGTARHGLVLLEAPLAELFGTSRVPVRRALDLLHEEGLICRFNGRGYLINPEGLAMEPLRLPLSAAHLGLNGEDELVDTRPLGERIVDEIGAALSTCIAFGHYRLDEQAAAEHYGVSRAVVREALMRLRDRGLVEKEPYSQWLAGPLTAREVTEDYELRACLEPEALRQSAPNLDREVLQAMLQRVLEAQSTPHCSLEAIERIEEDLHQHCLAGLQNRKIAALIRQGQSPMIISRIFHGLLGIGADPSMLAEHRLILELLLHGAFDAAALNLREHLQRARQRMLQRLKVLSVLPEQPLPAYLHKIS
>NZ_CP054205.1|WP_034137127.1|1382686_1385107_-|endopeptidase-La
MSDQQEFPDYDLNDYADPENAESHSSNTGLALPGQNLPDKVYIIPIHNRPFFPAQVLPVIVNEEPWAETLELVSKSEHHSLALFFMDTPPEDPRHFDTSSLPLYGTLVKVHHASRENGKLQFVAQGLTRVRIRTWLKHHRPPYLVEVEYPHQPSEPTDEVKAYGMALINAIKELLPLNPLYSEELKNYLNRFSPNDPSPLTDFAAALTSATGNELQEVLDCVPMLKRMEKVLPMLRKEVEVARLQKELSAEVNRKIGEHQREFFLKEQLKVIQQELGLTKDDRSADVEQFEQRLEGKVLPAQAKKRIDEELNKLSILETGSPEYAVTRNYLDWATSVPWGVYGKDKLDLKHARKVLDKHHAGLDDIKSRILEFLAVGAYKGEVAGSIVLLVGPPGVGKTSVGKSIAESLGRPFYRFSVGGMRDEAEIKGHRRTYIGALPGKLVQALKDVEVMNPVIMLDEIDKMGQSFQGDPASALLETLDPEQNVEFLDHYLDLRLDLSKVLFVCTANTLDSIPGPLLDRMEVIRLSGYITEEKVAIAKRHLWPKQLEKAGVAKNSLTISDGALRALIDGYAREAGVRQLEKQLGKLVRKAVVKLLDAPDSVIKIGNKDLESSLGTPVFRNEQVLSGTGVITGLAWTSMGGATLPIEATRIHTLNRGFKLTGQLGEVMKESAEIAYSYISSNLKSFGGDPKFFDEAFVHLHVPEGATPKDGPSAGVTMASALLSLARNQPPKKGVAMTGELTLTGHVLPIGGVREKVIAARRQKIHELILPEPNRGSFEELPEYLKEGMTVHFAKRFADVAKVLF
>NZ_CP054205.1|WP_034096061.1|1382107_1382497_-|protease-inhibitor-I42-family-protein
MTAARLLLPLSLALLAACASAPKQNVTVENQSACPLQLKTGQNLILTLPSNPTTGYRWAIQDSAGGVLRALSPEVYSSSESGVIGGGGQSTWRFQAFAPGQGRLRLTSQQPWEPEAEPVEAFDCAITVN
>NZ_CP054205.1|WP_167417233.1|1381458_1382106_-|lysoplasmalogenase
MPWLILALMGAGTFIYGLTTHATLLCLLVKPLPVLALLGWLHDAPPTDYRRWISLGLIFSLVGDVLLAWPGDLFIFGLGAFLLAHLAYLKAYFSDCRRLAPLPLILALGVGAVLLSLLISHGLGDLLIPVVVYALVISAMLWRALARLGGDVPKRSALLAAAGAASFVFSDTLIGINRFVVTFEAAPYLLITTYWLGQWGITAAAFSVSASKRTL
>NZ_CP054205.1|WP_167417234.1|1380892_1381297_-|hypothetical-protein
MRNQKNANGEFSGTISKNDAPTDFVGESFYLYYDDRELEIYAGDKVSENRWSSITLTLTPNIVAGKHVLDNFSSFRSAMVVPAELDSLQNYEGTLDITPDHTNRHYKGKLSLTAKSNGSDTYKIDATFDLQEST
>NZ_CP054205.1|WP_034137125.1|1379996_1380740_-|carboxy-S-adenosyl-L-methionine-synthase-CmoA
MSQEPDRLFAQPLPQVPDFAFNEDVVRVFPDMIKRSVPGYPTIVENLGVLAAQFAQPHSVLYDLGSSLGAVTQALRRHVRTEGCSVIAVDNSAAMVERCREYLNGQDSMFQELLPVQVVEGDILALQFQPASVVALNFTLQFIAPEERLALLGRIRQALLPGGALILSEKLRFDDLEEHALLTDLHVAFKRANGYSELEIAQKRSAIENVMKPDSLEEHRERLLAAGFSKVVPWFQCLNFASLIALP
>NZ_CP054205.1|WP_034111902.1|1391391_1392141_+|SDR-family-NAD(P)-dependent-oxidoreductase
MPQLTDRRAVITGAGSGIGAAIARAYAVEGARLLLADRNAASLAETAITCRNLGAEVVECVADVGTLEGAQAGVDRCVEHFGGIDILVNNAGMLTQARCVDLTLEMWNDMLRVDLTSVFVASQRALPHMLAQRWGRIINVASQLGIKGGAELTHYAAAKAGVIGFTKSLALEVAKDNVLVNAIAPGPIETPLVGGISEAWKRAKAAELPLGRFGLADEVAPTAVLLASEPGGNLFVGQTLGPNAGDVMP
>NZ_CP054205.1|WP_034096069.1|1392154_1392454_+|hypothetical-protein
MCGLCGLLGEDLHWSDPLGDELPRRRERLRRIAAINQVLAVFRLKVEDFQGASYLLIGATGKQALASGLDQLWQAAESMLGRALDPLDATLLDHLESAP
>NZ_CP054205.1|WP_167417229.1|1392450_1393425_+|GTP-binding-protein
MSMALNVITGFLGSGKTTLLKRLLEGESLGDIALLINEFGDVGIDHLLVEEVAPDTVLLPSGCVCCSIRGELKDALLALLQRRERGEIPAFKRVILETTGLADPAPILATLNNDVQLRGRFHIGLVITLVDASHAALQERLHPEWLAQVAAADRLLLSKTDLAGDCAPLRAHLQALNAGTPILDSHAIHSGDQLLLGEGLRSAAPADEVQRWQLHRSTTASHGAAQVCCLTFEQPLDWVGFGVWLSMLLRCHGERILRVKGLLNVNASNAPIVIHGVQHCLHAPVHLPAWPGSDRQSRLVFILRGLDPALLRRSFEVFSRRLAR
>NZ_CP054205.1|WP_034137133.1|1393421_1394600_+|extracellular-solute-binding-protein
MITLRVLGTSVTLLECLRVRAEQELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNVDFVWPARAIQPIDTRRIALWHEINDLPKRGRLSPNDRLGSGSVPSERLFVQHDGSLGSTVTERISMLPLTHNADSFAYRPERLPAGFCRGNESWGWLLDPAWRARTALQSDAAIGALDAALAVQGAGLASFRDIGNMSIEDIDVLADILVRKQKEGHFAAFWSDDEEAAQLMLSPSIDIQSLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAQGPVLDAAYAYLNWWLSGWPGAVMARQGYYIGNPARTRDHLSAAEWDYWYAGKPAREELPGSDGLPLIDRGEVRDGGSYEQRMGHIAVWNAVMDEHNYLVRRWGDFMRARGPA
>NZ_CP054205.1|WP_167417228.1|1394810_1397147_+|EAL-domain-containing-protein
MTWRHTFQTRIAGVLALLLLVVVAATYFAVQAATSRAVENQARAQLKTGSQVFERLLDLRGRRLQYGLDWLTADGPFVSAVAEGNSASILDVLERHGSGIRSSEVLVLGLDGTVMVSTLPGVTRGQVFPYAEALRRARRSGLQMLIVAMDQRPYLLVQDEVVDTTPIARVVMGFPMDTLFANELRSMSNLEVSFLSMRNGHVGQLFSTQPDAYQATVINLLRGARPDPEAHIHRFYGERVLSQVLTLANTGEGDDVRVLLQSPLDHALESFAPLDRQFLGIALAVLVVSLAGALFLARRVSRPLNALVDAAGRIGAGDYRTPVRVRGHDEFGLLARAFNAMQSGIAMRERQLAHNALHDPLTGLPNRALAMERLGSAISARRPVALLYLGIENYRTINEGFGPEGVEDMLREASRCLSMSLLASDTAARVSGSEFLLLLENIGIDRAVARADRLYALLTEPQRIGNDELRHEVSIGIAVYPNDGQHVEELISRAAIARHDAAMLPGYLQIYQQDRDLAHQRQITLIRDLRRAAAEGALHLCYQPKLDLKHGQVRQAEALLRWQHPSLGLVSPAEFIPLAERTGSMASLTHWVIEEAIRQIAEWARRGLLIQLSVNISVDDLADDDLAIRVTTLLAQHGVHAEQLLFEITESAIMHNPRQALSVLEQLRGCGISLSVDDFGTGYSSLAQLQRLPVQELKIDQSFVRNLDNEGGDGVIVRSTIEMSHNLGLKVVAEGVEFEPSLKLLKQWNCDTAQGYLISRPLNAMAFEMWMRRERAAV
>NZ_CP054205.1|WP_034096073.1|1397341_1398019_+|methylamine-utilization-protein
MARCVNLLSRMMLLLAAAAPVSAATLEVLVQQADGSPVSDAVVTLQGPAAVAAVAPKAEMDQRGQRFAPHVLAVHTGTQVRFPNSDNIRHQVYSFSAAKRFELRLYEGTPTAPLLFDKPGVVVLGCNIHDWMLGYIYVTDDPHFGVSDAQGRVRLEPLAPGDYHATLWHPQLADMQPLDGGTLHIPAAGLSHRVQLTLQPASADLPPAPTAFGDAFNRAARETAQ
>NZ_CP054205.1|WP_167417227.1|1398002_1400354_+|EAL-domain-containing-protein
MKLRSSYQARVATVLILLSLVVIGALYFSVKMATRQAVHGQALAQLQVGTRVFERLLDVRGRRLADGVQLLAADFGFRDAVASGDSATMRSVLLNHGKRINASDMILLGMDGKVLASTVDEVAEGSSFRYDQALREMRRQRQAALLIVPLQGTPHLLVEAPVLAPLPIARVVMGFSMDTAFADELRSLSNLEVSFLAIDRQQPGTLVSTQPQVLRDSIVSLMLGASTHEGVSTTEHLAHRFLSQSLVLASNADSQVLALLQSPLDSAMQAFVPLDEKILAIALVALAASLVGALLLARGVSRPVQALAQAAERIGHGDYQTPVILTRSDELGRLAVALNAMQSGIAEREQQLAHNALHDRLTGLPNRALAMERLGSAIATQRPMALIYLGIDNLRAASETAGPDAVDELLLNVSRRLQAVLRPRDTLAHLIADEFLLLLDGAGRDEAVGLADKLQQLLLRPQRIAGHDLALDCRLGIAVYPDDGDSAQSLLERAAIAMKDAAQMPGRLQVYEPGRDLAHRRQITLIRDLRHAPGQGQLLLHYQPKLDIRLGHVRQAEALLRWQHPQFGMVSPAEFIPLAERSGSIQLLTQWVIEEGIRQLCEWNRRGLYLQLSLNISADDLLGDELAHRVSALLRRYGLPAEQLVFEITESAVMREPEKALKVLHLLRECGISLSVDDFGTGYSSLAHLKRLPVQELKIDQSFVRNLDETSEDAVIVRSTIEMSHNLGLKVVAEGVEYAHSLRLLERWQCDTAQGYLISRPLSADAFEAWVALPLSAQTSQVH
>NZ_CP054205.1|WP_167417320.1|1400391_1401222_+|DUF3034-family-protein
MASLSLPAALADNGRLIATGGASSLEGAAGGGITPWAVLSGYGEQHEWGATAFATTVDLPDYRLDVAGLALAYDNRVEVSFARQRFDLGTLVHKLNLPDDHLGQDVLGVKVRLFGDVIYDRLPQVSLGLQYKHQNTFDIPRLVGAKRDSDVEGYLAASRLFMGAAFGYNVLVNGGLRYSRANETGLLGFGGDRRDRRSLLKEGSVALLFNPRWALGVEYREKPDNLSFAGESDWADVFLAYFPSKHVSFVLAYARLGEIATLDNQNGTYLSVQGSF
>NZ_CP054205.1|WP_169867551.1|1401218_1401641_+|group-1-truncated-hemoglobin
MMRVLPVLLLVLLSACAQQPPKDDSLYRDLGAMPGITRIVEGMLLNIARDERIVERFRRIDIQRLRNKLIEQFCVEAGGPCTYTGDSMAESHKGQNVSRSDFNALVEDLIKAMDSEGIPVPTQNRLLARLAPMRGEVIEH
>NZ_CP054205.1|WP_034096077.1|1402204_1402711_-|hypothetical-protein
MNDHRRETSGSYPAAFIENPWGLLKRYMPVIGVDALVGCLSIGLTAILAMLTYLSQSSIEFSVRTSLLSGMGLGALFALAKYEVLYGRIHWVWVNVAIYLACLLVALPSIAYRPNAYLYSLCLLSPLIGLLILNSNRCRELRHKMVEIRHKREAIIATLKKQGRWKWW

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP054205_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054205_2

1736910-1737062

Orphan

Consensus_repeat	Method
AGGTTTGCAGCAGTCCAGCGCCACCCCCAACACCAAGCCCGGCACAGATAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054205_2

>merge|NZ_CP054205|2|1736910-1737062|CRISPRCasFinder
AGGTTTGCAGCAGTCCAGCGCCACCCCCAACACCAAGCCCGGCACAGATAAAACTGTGGGAGGGGGCTTTACTGAGTGAGCGAATTGTGTTGCAAAGGCTAGGTTTGCAGCAGTCCAGCGCCACCCCCGACACCAAGCCCGGCACAGATAAAA

>NZ_CP054205|2|2|1736910-1737062|CRISPRCasFinder
AGGTTTGCAGCAGTCCAGCGCCACCCCCAACACCAAGCCCGGCACAGATAAAA	CTGTGGGAGGGGGCTTTACTGAGTGAGCGAATTGTGTTGCAAAGGCT
AGGTTTGCAGCAGTCCAGCGCCACCCCCGACACCAAGCCCGGCACAGATAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054205.1\|WP_167416479.1\|1744169_1745048_-\|dihydrodipicolinate-synthase-family-protein	unknown	unknown	gnl\|CDD\|188630
NZ_CP054205.1\|WP_094064696.1\|1734755_1735367_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|224618
NZ_CP054205.1\|WP_167416473.1\|1730752_1732003_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_034137310.1\|1728433_1728748_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_167416471.1\|1727363_1728437_+\|serine-hydrolase	unknown	unknown	gnl\|CDD\|224594
NZ_CP054205.1\|WP_167416475.1\|1736145_1736763_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|226285
NZ_CP054205.1\|WP_034096348.1\|1743071_1743611_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|171560
NZ_CP054205.1\|WP_167416474.1\|1732225_1734517_-\|beta-glucosidase-BglX	unknown	unknown	gnl\|CDD\|185053
NZ_CP054205.1\|WP_034096335.1\|1726423_1727179_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225717
NZ_CP054205.1\|WP_167416478.1\|1742106_1743075_-\|FecR-domain-containing-protein	unknown	unknown	gnl\|CDD\|226235
NZ_CP054205.1\|WP_034096349.1\|1743783_1744116_+\|YegP-family-protein	unknown	unknown	gnl\|CDD\|225956
NZ_CP054205.1\|WP_167416481.1\|1746883_1747900_-\|DUF4917-family-protein	unknown	unknown	gnl\|CDD\|374458
NZ_CP054205.1\|WP_167416477.1\|1739422_1741978_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	unknown	unknown	gnl\|CDD\|273807
NZ_CP054205.1\|WP_167416472.1\|1728918_1729509_+\|YceI-family-protein	unknown	unknown	gnl\|CDD\|214870
NZ_CP054205.1\|WP_034137316.1\|1737197_1738424_+\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379330
NZ_CP054205.1\|WP_094064697.1\|1729510_1730668_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	unknown	unknown	gnl\|CDD\|224419
NZ_CP054205.1\|WP_034137322.1\|1746019_1746547_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380339
NZ_CP054205.1\|WP_167416476.1\|1738420_1739320_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|223769
NZ_CP054205.1\|WP_167416480.1\|1745076_1745859_-\|aldolase	unknown	unknown	gnl\|CDD\|180832
NZ_CP054205.1\|WP_034096342.1\|1735385_1736114_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429

Protein	Function_ID	Function_description	E-value
NZ_CP054205.1\|WP_167416479.1\|1744169_1745048_-\|dihydrodipicolinate-synthase-family-protein	gnl\|CDD\|188630	cd00408, DHDPS-like, Dihydrodipicolinate synthase family. Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.	7.20616e-96
NZ_CP054205.1\|WP_094064696.1\|1734755_1735367_+\|LemA-family-protein	gnl\|CDD\|224618	COG1704, LemA, Uncharacterized conserved protein [Function unknown].	1.39534e-76
NZ_CP054205.1\|WP_034137322.1\|1746019_1746547_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|380339	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain. This family contains transcriptional regulators containing an N-terminal XRE (Xenobiotic Response Element) family helix-turn-helix (HTH) DNA-binding domain and a C-terminal cupin domain. Included in this family is Escherichia coli transcription factor SutR (YdcN) that plays a regulatory role in sulfur utilization; it regulates a set of genes involved in the generation of sulfate and its reduction, the synthesis of cysteine, the synthesis of enzymes containing Fe-S as cofactors, and the modification of tRNA with use of sulfur-containing substrates. This family belongs to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	1.96392e-22
NZ_CP054205.1\|WP_167416471.1\|1727363_1728437_+\|serine-hydrolase	gnl\|CDD\|224594	COG1680, AmpC, Beta-lactamase class C and other penicillin binding proteins [Defense mechanisms].	1.024e-30
NZ_CP054205.1\|WP_167416475.1\|1736145_1736763_+\|TPM-domain-containing-protein	gnl\|CDD\|226285	COG3762, COG3762, Predicted membrane protein [Function unknown].	1.19259e-34
NZ_CP054205.1\|WP_034096348.1\|1743071_1743611_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|171560	PRK12527, PRK12527, RNA polymerase sigma factor; Reviewed.	1.80649e-30
NZ_CP054205.1\|WP_167416474.1\|1732225_1734517_-\|beta-glucosidase-BglX	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	0
NZ_CP054205.1\|WP_034096335.1\|1726423_1727179_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225717	COG3176, COG3176, Putative hemolysin [General function prediction only].	2.03508e-63
NZ_CP054205.1\|WP_167416478.1\|1742106_1743075_-\|FecR-domain-containing-protein	gnl\|CDD\|226235	COG3712, FecR, periplasmic ferric-dicitrate binding protein FecR, regulates iron transport through sigma-19 [Inorganic ion transport and metabolism, Signal transduction mechanisms].	1.49156e-56
NZ_CP054205.1\|WP_034096349.1\|1743783_1744116_+\|YegP-family-protein	gnl\|CDD\|225956	COG3422, COG3422, Uncharacterized conserved protein [Function unknown].	2.77743e-21
NZ_CP054205.1\|WP_167416481.1\|1746883_1747900_-\|DUF4917-family-protein	gnl\|CDD\|374458	pfam16263, DUF4917, Domain of unknown function (DUF4917). This family consists of uncharacterized proteins around 340 residues in length and is mainly found in various Burkholderia and Brucella species. The function of this family is unknown.	8.48672e-42
NZ_CP054205.1\|WP_167416477.1\|1739422_1741978_-\|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor	gnl\|CDD\|273807	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein. This model represents the TonB-dependent outer membrane heme/hemoglobin receptor/transporter found in bacteria which live in contact with animals (which contain hemoglobin or other heme-bearing globins) or legumes (which contain leghemoglobin). Some species having hits to this model such as Nostoc, Caulobacter and Chlorobium do not have an obvious source of hemoglobin-like proteins in their biological niche and so the possibility exists that they act on some other substance. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	2.88398e-118
NZ_CP054205.1\|WP_167416472.1\|1728918_1729509_+\|YceI-family-protein	gnl\|CDD\|214870	smart00867, YceI, YceI-like domain. E. coli YceI is a base-induced periplasmic protein. The recent structure of a member of this family shows that it binds to polyisoprenoid. The structure consists of an extended, eight-stranded, antiparallel beta-barrel that resembles the lipocalin fold.	5.99333e-18
NZ_CP054205.1\|WP_034137316.1\|1737197_1738424_+\|SAM-dependent-methyltransferase	gnl\|CDD\|379330	pfam13679, Methyltransf_32, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.91226e-31
NZ_CP054205.1\|WP_094064697.1\|1729510_1730668_+\|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	1.8129e-81
NZ_CP054205.1\|WP_167416476.1\|1738420_1739320_-\|EamA-family-transporter	gnl\|CDD\|223769	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only].	2.98231e-13
NZ_CP054205.1\|WP_167416480.1\|1745076_1745859_-\|aldolase	gnl\|CDD\|180832	PRK07090, PRK07090, class II aldolase/adducin domain protein; Provisional.	0
NZ_CP054205.1\|WP_034096342.1\|1735385_1736114_+\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	7.06895e-67

>NZ_CP054205.1|WP_167416475.1|1736145_1736763_+|TPM-domain-containing-protein
MALLSEHEQRQVAEAIARVEQQTEAELVTVLAARADDYAYIPLLWASLIALVVPGVVHYLSGYLTMYTLLLAQWATFIVLCLVFRLPKVTTRLIPRSVRHWRASNLARRQFLEQNLHHTVGSTGVLIFVSEAERYVEILVDEGISKRLDDSRWDAIVQAFTQQVKQGQTLAGFIACIEACGELLKVHVPVTQARNELPNRLVVLE
>NZ_CP054205.1|WP_034096342.1|1735385_1736114_+|TPM-domain-containing-protein
MRLLRIGLALWLLACVGVAQAALTFPALTGRVVDNAQMIDPAVRAQLTQQLQALEQKSGDQIVVVTVPDLQGVPIEDFGYQLGRQWGIGQKGKDNGALLIVARDERKLRIEVGYGLEGVLTDAQSWVIINQVIAPKFKAGQYSQGISDGVAAMIQVVGGEPLAVPAHVADGNFAKDNPRLSIGLFVLLIGVLWLCNRLGLPVGAILLAILSSSGRGGGGGGGGGGFRGGGGGFGGGGASGGW
>NZ_CP054205.1|WP_094064696.1|1734755_1735367_+|LemA-family-protein
MQAAQVNRWGLKAAALLLISTVLSGCGINNIPTLDEQAKAAWGQVQNQYQRRADLIPNLVEVVKGYAAHEQDTLTAVIEARAKATSIQVDASTLDNPEKLKQFQQAQDGLTGALNRLMVVSERYPDLKANQNFLALQSQLEGTENRIAVARRDFIQAVQAYNTEIRTFPGRLWHSVMYSDLPIRATFEATSADADKAPQVKFK
>NZ_CP054205.1|WP_167416474.1|1732225_1734517_-|beta-glucosidase-BglX
MKKLCLLGLVATLASHPVWAETKPAALKDKDAFVSDLLKQMTLDEKIGQLRLISIGPEMPRELIRKEIAAGRIGGTFNSITRPENRPMQDAAMRSRLKIPMFFAYDVIHGHRTIFPISLALASSWDMDAIGRSGRIAAQEAAADSLDITFAPMVDISRDPRWGRTSEGFGEDTYLVSRIAEVMVKAFQGTSPANADSLMASVKHFALYGAVEGGRDYNVVDMSPVKMYQDYLPPYHAAIKAGSGGVMVALNSINGVPATANTWLMNDLLRKNWGFKGLTVSDHGAIFELIKHGVAKDGREAAKLAIKAGIDMSMNDSLYGKELPGLLKSGEIEQSDIDNAVREVLGAKYDMGLFKDPYLRIGKAEDDPVDTYADSRLHRAEARDIARRSLVLLKNHNNTLPLKKSATIALVGPLAKAPIDMMGSWAAAGRPAQSVTLQDGLNAVIGEKGKVIYARGANITNDKAVVDYLNFLNFDAPEVVDDKRSPQAMIDEAVQAAKQADVIVAAVGESRGMSHESSSRTDLNIPQSQRDLIKALKATGKPLVLVLMNGRPLSILEENQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPITFPRSVGQIPTYYNHLTIGRPFTPGKPGNYTSQYFDDTTGPLFPFGYGLSYTTFSLSDMALSSTTLNKTGKLDASVTVKNTGKVDGETVVQLYIQDVAGSMIRPIKELKNFQKVMLKAGEERTLHFTITEDDLKFYNTQLKYAAEPGEFNVQIGLDSQDVQQQSFELL
>NZ_CP054205.1|WP_167416473.1|1730752_1732003_-|hypothetical-protein
MTLNINHPSSNQSVSTIALADTTINPQSHTTTSNTVTQSAQAYSLSTKTAQVKAPFNSEAAAAYGTFKQEIIKSRQSDSNSANASEEKTTGDMLSRQKRSDSTRSAYREGANEANDLFNTLFPSTQPHQKSEDPSGANDLFNVLNAEPEAEPEPTPAPAPPESGVDERMGADILHKDLNDYDKRISAQSNPVGDSQLATVVANTMLGLKESDLATPSPMVDIPKESTYGKWLEASTKAFSNTGLASWANDNNIDRSSLSYDSANGVLHGKTWNDEEKSFTQEEFSQQFPKHQEAFKPLVDIARIIYPSGQGVLHAEEPTDRASLDSVLSFYGLPINKDEISSTHQVAKDLADNNSFPESANSPDRSNDKLLQYQESVSTLNDKIQRLLDKEYEENSNKGNFMAIEVSASGGARMAV
>NZ_CP054205.1|WP_094064697.1|1729510_1730668_+|phosphatidylserine/phosphatidylglycerophosphate/-cardiolipin-synthase-family-protein
MGGAVFPWRSANRFELLIDGPQFFPQMLVGIARAEQQVDLELYLVEAGACAEAMVQALVLAAERGVRVRCLFDDYGSLAFTLSLRKRLTDAGVELRFYNRLSWRRWMRNLYRDHRKLLLIDQHVAVVGGTGVTDEFWTPGHDTAEWHEVMVQISGPLVLDWQALFDRQWHANAARRAWKPATHFGLPRLPKVPASGPGLGRVAYADARQHRDILQSLIRALNNSHQRIWLATPYFLPTWGVRRALRRAAGRGVDVRLLLTGPRTDHPSVRYAGHRYYPRLLRSGVQIFEYQPCFLHLKMVLVDDWVSIGSCNFDHWNLRFNLEANLEALDPELTQAVVASFTADFAQSQTVSLEAWKARPLWRRVKQRVWGWIDRLVVNLLDRRG
>NZ_CP054205.1|WP_167416472.1|1728918_1729509_+|YceI-family-protein
MFNVSFIQPLAFVLLAAVAVPAHADWYLDNESSRLSFVTTKNTEIAEVQRFLVLHGKVDDKGAAQVQVELESVNSGIPLRDERMRNQLFEIKTFPEGLISAQINLQPINDLAPGAQLELRLPLSVTLHGKTQTYSAELLATRLDDRRFQVVTLEPVVLHAEDFDLAPGVAALRKTAGLKSISLSVPVGAVLIFTAR
>NZ_CP054205.1|WP_034137310.1|1728433_1728748_+|hypothetical-protein
MIRRRPFTSLFLLLLLALLGWVWHERVNLQAFPDIIAAYTAKEYCSCRYVANNPAAYCLGYVKQYLPTSAFNDNPLRSEVTASGLGRTHTARWLGERQGCRLNP
>NZ_CP054205.1|WP_167416471.1|1727363_1728437_+|serine-hydrolase
MVKGLLCAVLLLITINGHAENWPDQEWAKGTPLTGPALEALDAYAFAPRDDATRQGIRTDALLVIRDGKVIYERYAAPTSASTPHLTWSVSKSLMACVLGVAYGDNRFKLSDPVARFYPPMKQHPTVTMADLLHWASGLDWQEDYEFAPLKSSVVAMLYTRGRADMAEFAANSDTFSAPGRAFRYSSGDSNLLSAALKGMLGHKAYMSYPWDALFTPLGIRNATWETDADETFVASSYAYLTARDLARVGLLMARDGRWKDQQLLPRDWVAFNRQAFGNYKAGQDEATPGGHWWLNQGTPRPWPDAPADTFAALGHWGQALYVMPEQRLVIVRYGDDRDGSYRHNELLKRVLAAVQP
>NZ_CP054205.1|WP_034096335.1|1726423_1727179_-|GNAT-family-N-acetyltransferase
MTQIARISDTGNERRLQAERLIGAQALQEAQALRFNVFSGEFNAKLKGAEHGLDMDDYDVHCSHIGVRDLNTGRLVATTRLLDHQAASTLGRFYSEEEFSLHGLLHLKGPILEIGRTCVDPAYRNGGTIAVLWGELAEVLNQGGYSYLMGCASIPMHDGGIQAHAIMQRLRERYLCNEHLRAEPKKPLPALDLPSNVIAEMPPLLKAYMRLGAKICGEPCWDEDFQVADVFILLKRDELCPRYARHFKAAM
>NZ_CP054205.1|WP_034137316.1|1737197_1738424_+|SAM-dependent-methyltransferase
MSVTAQPARPAPDHHAQFIELLGESLAHNAFIKLVLAKYVGDEAELQRLIIKPVTVKEQACLSFVYRYKTRDITKNLPLAEGVAAIAALLPTSFKNAHLLALTDEAQLEYSKKNKSSLFKSKPQQLREAPSAEHNREKNRFLDLSRPFLADLGVTDAKQALIPSMSRKWKQINKFIEVFSHALTSSPLKLDQPVRVADFGSGKGYLTFAIHDYLRNTLNAEAQVTGVELREDMVTLCNSAAARLEHPGLVFKCGDVRSVAPSELDVMIALHACDIATDYAIHTGIRSGASIIMCSPCCHKQIRLQIQSPALLKPMLQYGLHLGQQAEMVTDSLRALFLEACGYETKVFEFISLEHTNKNKMILAVKRAEPVDNASLLEKIQALKAYYHITEHCLETLLRADGYLGTRR
>NZ_CP054205.1|WP_167416476.1|1738420_1739320_-|EamA-family-transporter
MSSRENTGTALGLLGVIIFSLTLPFTRIVVQDMHPLLNGLGRALFAAVPAAALLLWRRERWPTWRQVRGLGLVIAGVILGFPVLSAWAMQTLPASHGALVNGLQPLCVALYAAWLSHERPSKAFWACAALGSGLVLSYALITGAGSIQAGDLLMLGAIAVGGLGYAEGGRLAKEMGGWQVICWALVLSTPLLIGPVWYLAAQHQGAISARTWWAFGYVSLFSQFLGFFAWYAGLAMGGIARVSQIQLLQIFFTIAFSALFFGEQIEPITWVFACGVIVTVMLGRKTAVQPAPVPKPSAV
>NZ_CP054205.1|WP_167416477.1|1739422_1741978_-|TonB-dependent-hemoglobin/transferrin/lactoferrin-family-receptor
MLRAPCLALPLFRPTLAVTCLAFSLGAQAESFTLHLPAQPLAASLSQVAQQTKIQLLFDEAQLKNVQAPALNGDYSAETAIRNLLSNGEFILIKVGSTYVVKPEEARTTTSGAIQLEALSVIGTGNEVDSSTVGRSTLSQADIERYQANNIPSLLQTLPGVSQGGSLKPGGQTINIRGFGDAEDVPLTVDGATKSGFERYQQGTVFIEPELIKSIEVEKGPNSPFTGNGGFGGTVNMTTKDAPDLLQDGRNSGAMLKYGYSSNDHEQVYSSAVFGRTDDGRFDALAYLTKRDGDDMKVAGKLPNENNQYPINPQRLPNSAQNVDGQLFKVNAHFTDEHSVGLSYSRSHSDRWTPFSAASYPTPPTLANIDRYGYEGALKRFLANRDTVDTTWSGKYEYQPLDNPLVDLTVKYSQSDTEQTDERTATAFFQLASGGRRMDTAYTDKNLDIRNVSLFDTGPLQHAVTVGTQIRKHTRETEMWMPGATYNTPRYNYGHFQPGFMPHGKVDTNSFFIQDAVTLGDVTVTPSLRYDHVRNRGEANDAPYYSNPNPAVGHDYSDRTYTGWSPRLAVFWTVTPQVGLFANWSQTWRAPVIDEQYEVQGVGSRTATSVDLDPERITSITVGNITSFDNLIAQDDSLQVRTTLFHNKVEDEIFKATGVGCQNQAINGGTISTACPPGPMSNYRNIGGVTIKGFEVESFYNSTYLFGSVSYAYTTGQHEGAYTNPWGPNVSARDIPPTKWVLVLGTHIPAWDAQVGWMGQFIGATDRLPSDKYSGGPGSSVGDTFYDQYNNKRYNTQGLFAKWKPQQAYLKGTEVNFTLDNMFNNNYRPALSGDRAYTKGRDAKISVTRFF
>NZ_CP054205.1|WP_167416478.1|1742106_1743075_-|FecR-domain-containing-protein
MNRLSDTDSLDIEASDSIDAQAASWFARNREDTGRADRKAFAAWYAVPAHARAYAEFEQLWADLAQLQQLNKPVALAPRKSSPWRPALAVAAAVLCAVMATHLGAPRELYHTQVAAQAKGTRTLNLPDGSTLYVNANTRLRVDFSAHQRIVHLDQGQLYIEVAADKERPLFVHAGEARVRVVGTGFDVRRSPQQLVVSVAHGQVAFEPTAKSPVAMLGAQQRAGYNYAKGTLVQSSLTDETVADWRSGHLAFRNRELASLIDEVSLYRPQAPLQVSQAVAQLRVSGNLDVNDPDALLNALPALLPVKTVVLADGAIRIEPNR
>NZ_CP054205.1|WP_034096348.1|1743071_1743611_-|RNA-polymerase-sigma-factor
MSRPKPDPLSADAFRGFYADILHFLRKRTDNVSDAADMTQDVFTQWLDYRDRAKVEQPRAFLFQMARNLLRDHWRKQKVRQSVHGEQADKPCEALTDEQNEPMAAALRLQRLEQLKEVLAELSPRRREALMLHRFEGLSQAQIAERMGISTSMVEKHIAFALLHCKRRLQHDPGTEQPE
>NZ_CP054205.1|WP_034096349.1|1743783_1744116_+|YegP-family-protein
MAGWYELSKSSNGQFRFVLKAANAETILTSELYATRSAAENGIASVQTNSPHDERYERKLAQNGKPYFNLKAANHQVIGTSEQYSSEAARDQGIASVKSNGPSTTIKDKT
>NZ_CP054205.1|WP_167416479.1|1744169_1745048_-|dihydrodipicolinate-synthase-family-protein
MSSLNIHGIIGYTITPFSADGQRIDFDALGRSIDRLIAGGVHAIAPLGSTGEGAYLSDTEWDEVSAYSLEKVGKRVPTIVSVSDLTTAKAVRRARYAEAHGADVVMVLPASYWKLSEAEILAHYAAIGASIGVPIMLYNNPATSGTDMSVDLILRIVEQVDNVTMVKESTGDIQRMHQLRRRSDVPFYNGCNPLALEAFVAGAKGWCTAAPNLIPALNLALYDAVLANDLSQAQALFYQQLPLLDFILKGGLPATIKAGLGLTGLEVGDPRLPVFPLGDTARNQLKGLLEAV
>NZ_CP054205.1|WP_167416480.1|1745076_1745859_-|aldolase
MAKTLALPKDQLVKHALTQMQNTLADNTWTDRQKLALTCRILFDHGHDSGLAGQITARGPMPGTYYTQPLGLGFDEITASNLLLVNEDLEVLEGHGIPNPANRFHTWVYRGRPDVNCIIHTHPTHVAALSMLEVPLQVSHMDLCPLYDDCAFLQTWPGVPVGNEEGAIITTALGDKRAILLSHHGQLSTGAAIEEACVIAQLIERAAKLQLLAMAAGTIQPILPELGREAHDWISKPKRHGAAFNYYARQTLHQHVDCLN
>NZ_CP054205.1|WP_034137322.1|1746019_1746547_+|helix-turn-helix-transcriptional-regulator
MSIRLKLLRKKLGVTLETLAEKSGMTKSYLSKVERGLNTPSIAAALKLAKALNVNVEELFSEERASLDSYSLVRSHERPDTSPGYAVLAHQVSERSLLPFIIYPPAEFSDKTFKEHVGEEFLFVHEGQVEVDFMNERVILERGDALHFNAQKPHRIRSVGPVQAQLLVVVHSTDE
>NZ_CP054205.1|WP_167416481.1|1746883_1747900_-|DUF4917-family-protein
MKDFQDIDAHLEDWSALRSTHDFSAILIGNGASRAIWEDFAYDSLFENARTVEEKPLSASELSVFDALQTRSFEQALGALKTTSRVNKALAVSSAAPRNRYYAIKEALINTIHAVHIPWRLVQPSTLAAINGELARYSTVFTSNYDLLNYWAILHAPGIDDLFRGAEACFDLRDTRTDATRILYLHGGLHLVRNLDGTARKLPSTDSTLLSSFAINNTLKTLDDVPLFVSEGSVQEKLKTIRSSDYLSYCYAQLLNHQGALCVFGHELGTQDSHLVDAIRHARPSTLAISVSGRSEGFIRQQKRRYSQLFDGTGVALKFFAARTHALGNPALSVPVET

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP054205_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054205_3

2409754-2409962

Orphan

Consensus_repeat	Method
AACGGTCAAAGCTGCGGCAA	CRT

3 spacers

The CRISPR arrays of NZ_CP054205_3

>merge|NZ_CP054205|3|2409754-2409962|CRT
AATGGCCAAAGCTGCGGCAATATCCGGGACAACGACCTTCGGGCCAGTTGCTCGGCGGAAATGAACGGTCAAAGCTGCGGCAACATCAGTGACAACGATCAACGCGCTTACTGCAATGCCAAAGTCAACGGTCAAAGCTGCGGCAATATCCGGGACAACGACCTTCGGGCCAGTTGCTCGGCGGAAATGAACGGTCAAAGCTGCGGCAA

>NZ_CP054205|3|1|2409754-2409962|CRT
AATGGCCAAAGCTGCGGCAA	TATCCGGGACAACGACCTTCGGGCCAGTTGCTCGGCGGAAATG
AACGGTCAAAGCTGCGGCAA	CATCAGTGACAACGATCAACGCGCTTACTGCAATGCCAAAGTC
AACGGTCAAAGCTGCGGCAA	TATCCGGGACAACGACCTTCGGGCCAGTTGCTCGGCGGAAATG
AACGGTCAAAGCTGCGGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054205.1\|WP_052198944.1\|2423364_2423589_-\|general-stress-protein	unknown	unknown	gnl\|CDD\|226252
NZ_CP054205.1\|WP_034137771.1\|2413351_2413972_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP054205.1\|WP_167417414.1\|2414185_2415655_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP054205.1\|WP_034137761.1\|2400665_2401088_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_034137765.1\|2405552_2407376_+\|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl\|CDD\|234792
NZ_CP054205.1\|WP_034097254.1\|2404070_2404310_-\|DNA-binding-protein	unknown	unknown	gnl\|CDD\|274987
NZ_CP054205.1\|WP_167417409.1\|2396915_2400530_+\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|182169
NZ_CP054205.1\|WP_123480173.1\|2401163_2402234_-\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|237190
NZ_CP054205.1\|WP_003190387.1\|2404909_2405551_+\|UvrY/SirA/GacA-family-response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|236538
NZ_CP054205.1\|WP_167417415.1\|2417063_2420147_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP054205.1\|WP_167417418.1\|2422682_2423258_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182632
NZ_CP054205.1\|WP_034097256.1\|2404392_2404758_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP054205.1\|WP_167417410.1\|2402853_2403603_+\|carbon-nitrogen-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|143587
NZ_CP054205.1\|WP_167417417.1\|2421757_2422546_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP054205.1\|WP_034137778.1\|2423749_2423926_-\|general-stress-protein	unknown	unknown	gnl\|CDD\|226252
NZ_CP054205.1\|WP_167417413.1\|2411293_2412139_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_CP054205.1\|WP_034112946.1\|2415957_2417067_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP054205.1\|WP_167417416.1\|2420243_2421539_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|235781
NZ_CP054205.1\|WP_034137766.1\|2407408_2407969_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl\|CDD\|182763
NZ_CP054205.1\|WP_167417411.1\|2403603_2404035_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181

Protein	Function_ID	Function_description	E-value
NZ_CP054205.1\|WP_167417414.1\|2414185_2415655_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	2.04565e-78
NZ_CP054205.1\|WP_052198944.1\|2423364_2423589_-\|general-stress-protein	gnl\|CDD\|226252	COG3729, GsiB, General stress protein [General function prediction only].	0.00118079
NZ_CP054205.1\|WP_034097254.1\|2404070_2404310_-\|DNA-binding-protein	gnl\|CDD\|274987	TIGR04111, conserved_hypothetical_protein, phage-associated protein, BcepMu gp16 family. Members of this protein family occur in Burkholderia phage BcepMu, Pseudomonas phage B3, and Burkholderia phage KS10, and many bacterial putative prophage regions. The member from Burkholderia phage BcepMu is named gp16. Homology suggests DNA-binding activity. [Mobile and extrachromosomal element functions, Prophage functions].	1.98448e-24
NZ_CP054205.1\|WP_034137765.1\|2405552_2407376_+\|excinuclease-ABC-subunit-UvrC	gnl\|CDD\|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_CP054205.1\|WP_034137771.1\|2413351_2413972_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	4.03138e-14
NZ_CP054205.1\|WP_167417409.1\|2396915_2400530_+\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|182169	PRK09959, PRK09959, acid-sensing system histidine kinase EvgS.	2.1373e-136
NZ_CP054205.1\|WP_123480173.1\|2401163_2402234_-\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|237190	PRK12755, PRK12755, phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional.	0
NZ_CP054205.1\|WP_003190387.1\|2404909_2405551_+\|UvrY/SirA/GacA-family-response-regulator-transcription-factor	gnl\|CDD\|236538	PRK09483, PRK09483, response regulator; Provisional.	1.16056e-111
NZ_CP054205.1\|WP_167417415.1\|2417063_2420147_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP054205.1\|WP_167417418.1\|2422682_2423258_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|182632	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional.	8.57407e-11
NZ_CP054205.1\|WP_034097256.1\|2404392_2404758_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.54608e-06
NZ_CP054205.1\|WP_167417410.1\|2402853_2403603_+\|carbon-nitrogen-hydrolase-family-protein	gnl\|CDD\|143587	cd07197, nitrilase, Nitrilase superfamily, including nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes. This superfamily (also known as the C-N hydrolase superfamily) contains hydrolases that break carbon-nitrogen bonds; it includes nitrilases, cyanide dihydratases, aliphatic amidases, N-terminal amidases, beta-ureidopropionases, biotinidases, pantotheinase, N-carbamyl-D-amino acid amidohydrolases, the glutaminase domain of glutamine-dependent NAD+ synthetase, apolipoprotein N-acyltransferases, and N-carbamoylputrescine amidohydrolases, among others. These enzymes depend on a Glu-Lys-Cys catalytic triad, and work through a thiol acylenzyme intermediate. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. These oligomers include dimers, tetramers, hexamers, octamers, tetradecamers, octadecamers, as well as variable length helical arrangements and homo-oligomeric spirals. These proteins have roles in vitamin and co-enzyme metabolism, in detoxifying small molecules, in the synthesis of signaling molecules, and in the post-translational modification of proteins. They are used industrially, as biocatalysts in the fine chemical and pharmaceutical industry, in cyanide remediation, and in the treatment of toxic effluent. This superfamily has been classified previously in the literature, based on global and structure-based sequence analysis, into thirteen different enzyme classes (referred to as 1-13). This hierarchy includes those thirteen classes and a few additional subfamilies. A putative distant relative, the plasmid-borne TraB family, has not been included in the hierarchy.	1.16657e-38
NZ_CP054205.1\|WP_167417417.1\|2421757_2422546_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	5.31298e-83
NZ_CP054205.1\|WP_034137778.1\|2423749_2423926_-\|general-stress-protein	gnl\|CDD\|226252	COG3729, GsiB, General stress protein [General function prediction only].	8.48565e-05
NZ_CP054205.1\|WP_167417413.1\|2411293_2412139_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.51991e-46
NZ_CP054205.1\|WP_034112946.1\|2415957_2417067_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.3027e-53
NZ_CP054205.1\|WP_167417416.1\|2420243_2421539_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|235781	PRK06333, PRK06333, beta-ketoacyl-ACP synthase.	0
NZ_CP054205.1\|WP_034137766.1\|2407408_2407969_+\|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl\|CDD\|182763	PRK10832, PRK10832, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase.	1.3085e-68
NZ_CP054205.1\|WP_167417411.1\|2403603_2404035_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.28192e-05

>NZ_CP054205.1|WP_034137766.1|2407408_2407969_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNIPNLITVLRVLLIPIFILLFYLPYQWSYVASSSVFAFAAATDWLDGYLARRLEQSTPFGAFLDPVADKLMVAVALVLLVQEHGNLWLTLPAAVIIGREIVVSALREWMAEIGARAHVAVSNMGKWKTAAQMLALVILLANPSHFTFWVLLGYALLLIAAGLTLWSMLQYLRAAWPHLRTTVEKK
>NZ_CP054205.1|WP_034137765.1|2405552_2407376_+|excinuclease-ABC-subunit-UvrC
MTTPFDPSAFLSTCSGRPGVYRMFDTEARLLYVGKAKNLKNRLSSYFRKTGLAPKTAALVARIAQVETTITANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLSDGNFPRLSIHRGAKKQKGKYFGPYPSAGAIRESLSLLQKTFFVRQCEDSFYKNRTRPCLQYQIKRCKAPCVGLVEPAEYAEDVRHSVMFLEGRSNALTDELSAAMEQAASALDFERAAELRDQISLLRRVQDQQSMEGGSGDVDVIAAFVNPGGACVHLISVRGGRVLGSKNFFPQTGIDEDVAEVMAAFLGQYYVSSPERDLPSELIVNVVHEDFPALIEAIHELRGRELDISHRVRGTRARWQQLAVTNAEQALSARLANRQHVAARFDALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRYNIEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGTTRKAGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTRRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELIYANLHSE
>NZ_CP054205.1|WP_003190387.1|2404909_2405551_+|UvrY/SirA/GacA-family-response-regulator-transcription-factor
MIRVLVVDDHDLVRTGITRMLADIDGLQVVGQAESGEESLIKARELKPDVVLMDVKMPGIGGLGATTKLLRSHPDIKVVVVTVCEEDPFPTRLLQAGAAGYLTKGAGLAEMVQAIRLVFAGQRYISPQIAQQLAIKSFQPTSDSPFDALSEREIQIALMIVGCQKVQTISDKLCLSPKTVNTYRYRIFEKLAISSDVELTLLAVRHGMVDASA
>NZ_CP054205.1|WP_034097256.1|2404392_2404758_+|helix-turn-helix-transcriptional-regulator
MSGIGSRLRQERERLGLSQKVFGEIGGVEANAQGKYESGGRAPKADYLSRVAARGVDVLYVLTGTATPLQLDNLSQIEEKVLGDYRAMFKEDQDAIRRLTSTLAEHSASVNGKSKVQPSDS
>NZ_CP054205.1|WP_034097254.1|2404070_2404310_-|DNA-binding-protein
MPGIRTAAQAKAWLEHQGKSVQAFAREHGVDPATTYQVLAGRKKGRRGEAHKVAVLLGMKEGIILSEADGQNNDQEVDS
>NZ_CP054205.1|WP_167417411.1|2403603_2404035_+|GNAT-family-N-acetyltransferase
MMFNLRAATDNDRTFARTLTYEAMSRYYQQYGLLWSNDGFDVAWDGRENWLICREASVLGFISLSRDSKALYIRELHMLEGCRGLGAGSWVLQQMALKAQSLGLLRLTVFKTNPARRLYQRMGLSIVGEEDCFWRMERVCRPS
>NZ_CP054205.1|WP_167417410.1|2402853_2403603_+|carbon-nitrogen-hydrolase-family-protein
MTALTLAAAQSISVPGDVPANIRRHMAFMQVAAEQGVQLLIFPELSLTGYEPSLAADLAIAPDAAQLTPLRVMARELGLTVVVGMPIRLVPDAGVMIGALVLGADGSRAVYTKQHLHPGEEVAFVPGQGGVALAFGDDRIALSVCADFTHARHARAAAEAGANVYAASVLISEGGYAKDCAQLQTYAAEYRLLVLMANHGGPSGGWDCAGRSAIWSADGRLLAAVPGVGEALLVARRNNDVWAGHVVAL
>NZ_CP054205.1|WP_123480173.1|2401163_2402234_-|3-deoxy-7-phosphoheptulonate-synthase
MNSSVAALPVSTLISANQALTQRLPSALELKHQLPLSPFLVEQIHAHRQAVRAILNGEDSRLLVIVGPCSIHDPESAMEYARKLKKLALEVSDQMLLVIRAYVEKPRTTIGWKGLAYDPHLDGSDDMAAGLTLSRQLMREMLRLGLPVATELLQPMAAGYFDDLLSWVAIGARTTESQIHREMASGLDMPVGFKNGTDGGVAIACDAMRSAAHPHRHFGVDSQGHPAIIQTSGNPDTHLVLRGGHRGPNYDGQSVAQVKGDLAKSKVAARIMVDCSHANSGKDPLRQPAVFNDVLEQRLQGDTSLIGMMLESHLFEGCQPLSASMQYGVSVTDGCLGWDSTEQLLRGAAQRLRERC
>NZ_CP054205.1|WP_034137761.1|2400665_2401088_+|hypothetical-protein
MPNKALTILIADEQHLQRLYIEKMLNQLGYHRIVPVQTFEEVQILTAIPAEPFDVLIINAGLLVDTCEPQPQARHVLVYDHLDLCKPTGATPAVLVRLPGVPDNVNLEHFMDIIDPPEAATGLRVLPWLRELSRQPVAGV
>NZ_CP054205.1|WP_167417409.1|2396915_2400530_+|transporter-substrate-binding-domain-containing-protein
MITSRLAKLTAILLIGLLPQAAIALDDPHQLRLLGHSTLENASVTLDEADWRWLRERRTLVMGVSGPDYAPFDLTNNKNELEGITADYAALIAGVLHVTVEVQRFDTRDEVIEALKTGVVDFVGSANGYEAADPQLVLSRSYANDQPALVTRTGDSHALSADLAGKRVAMLYHYMQPDAVQAFYPDAQLLLFGSTFEAIGAVAFGQADVYLGDAISARYLINKNHLNNVRLADFSALEVNPFGFAFVKDNTRLLTIINAALAAVPANQQMEILRRWSAGGSGFLEADRLRLSASEQRWLEKNPRVKVAVLDKFVPLSYFNEKAQFEGLSAEVLSRISLRTGLKFDVERGSSLPRQIDEVGSGQADMLAVVTPSVERSEKIRFTRPYLSNPYVLVVASGNENLITLEDMVDKRLALIGGGGLASYIAVHYPRIDFVDVENPEQAMALVASGGVEAAAVSLISARYMIARHYRDGLRITSTIGTEPARITFGVNRGQLELYSILDKALLSITPEEMDELTNHWRNEIILEDSYWIRHRNVIIQGFGLAALLLVVTLGWVLYLRNLIHKRSQAERALSDQMRFMSVLIDGTPHPIYVRDRQGRLMACNNAYLDVFGFKLEDVIGKTVVETDTGNPPQAQSFHADYLQLMERGEPQIHDRVLKLPSGEVLTIYQWMLPYRDGDEKVVGMIAGWVDVSERQRLLGQLQEAKEEADAANRAKTTFLATMSHEIRTPMNAVIGMIELALKNAEQGRADRDALEVASVASRGMLELIGDILDIARIESGHLSLTLAPANPHELLTSVARVFEGLARDKGLALQVELDPLIDCAVMLDPLRFKQVVSNLLGNAIKFTATGQVRLGAMGTTSLDGHLNLRLWVEDTGIGISAEDQQRLFNPFIQGGNHEQSARSGSGLGLVISRNLCEMMGGQLHLTSVLGKGTRIDVALALALTTEAPVSLPVPHIPPARALNILVVDDYPANRVLLARQLSFLGHHIVTADDGEQGLALWQSGHFDGVITDCNMPLKDGYALTRDIRAQERQRGLVPCLVLGFTANAQPEETARCRQAGMDGCLFKPTGLEDLRSALAPLTAHAATNAAEPVFDLSALISLTGGDKAALDDLLAPLLASLKEDRAVLPALYEQRNLSKLHDLAHRVKGGARMVKAQVLIACAETLETVCERQQLDALGAAVEAIGLAIDSLHHSLALYCNQT
>NZ_CP054205.1|WP_167417413.1|2411293_2412139_+|SDR-family-NAD(P)-dependent-oxidoreductase
MNFIGKTAVVTGAGRGLGFSYAQALATLGANVLISDIGADKLGAGGDGSIAMEAAQTLRDKGLNVVGHHGDLSSEQGCEQLVATAIQTFGQLDILIHNAGWVGYQAIEEADTTFIGRAVDINIYTPVWLCKHAWKHLKQSAAARIVLTSSDRAMYQQYAQPGLVAYAAGKMAQLGIMNALSMEGTDAGILVNAVSPVAKTRMWGVTGEPEDLKPEWVTPGVVFLASQHCQDSGYVLRASNGQFTATRFVENPGVDYPVDLARIKATSAEQVAQLWDQIKEH
>NZ_CP054205.1|WP_034137771.1|2413351_2413972_+|TetR/AcrR-family-transcriptional-regulator
MNKTTIASTSIRGPADHEIRNQIVAAANQHFSQYGYSKTTVSDLAKAIGFSKAYIYKFFDSKQAIGEAICANCLAQMIAAVEQEINVGGLTPTERLRRLLKTLVATGVNLFFSERKLYDIAAFAASENWPCAQQYDALIRDFVVQIVREGRELGEFERKTPLDETVDAIHLALRPFVNPLLLQYNLDVVEVAPVLTSNLILRSLMP
>NZ_CP054205.1|WP_167417414.1|2414185_2415655_-|efflux-transporter-outer-membrane-subunit
MLSLRPAAFLISATLMTGCAVGPDYRRPDAPLPDRYWGPFSVGQRPAATPASLVIWWESFGDPLLAGFVSKALEQNLDLAQAQARVTQARAGLSAANAALAPSANISAQAARAYQSIETPLGQVLNSTPDYDRYGSSYEADLNASWEVDIFGGLRRGREAALAEYQASEAGAAATRLAIAAQTADTYITIRGLQARLDIANRQVKTQQGLLEKVQLLYSKGLAASYEVRQTEGALAQVQATVPVLQAGLDAAMNSLDVMLGTPPGTHRTQLAMVGSIPVAPQLTTLGTPADLLRRRPDLIVAERRLAASNARIGEAIAEYYPKFSLSALLGSATAVSAGNLFSGGASQSAGVLGLRWRLFDFGRINAQIDQAKGQEAEALAAYRQSVLRATEDVENALSSLVNRDAQATTLMGGETALTQARQSSFIAYEKGTASLIDVLHADETLLQASDARAQAQTESARAAVATFRALGGGWQPSATQLTSRYPLR
>NZ_CP054205.1|WP_034112946.1|2415957_2417067_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MLRLRPFPIAACLLPLVLTACGDSSNLDDPRTQAPLVRPGTVEGASEASRSFTGVVAARVQSDLGFRVSGKILERLVETGQSVKRGQPLMRLDPIDLGLQARAQQESVIAAKARAKQTADDEARYRSLVAAGAISASAYDQIKASADTAKAQLSAAEAQADVARNASGYAVLFADSDGVVVETLAEPGQVVSPGQPVVRLARAGQREAIVHLPETLRPAPGSTAQATLYGDTANAVTAKLRLLSDSADQATRTFEARYVLAGALTNAPIGSTVTLRIAEGAAQAQALRVPIAALYDPGKGTGVWVIAGSPAKVSWRPVQVLGLSDDAARVAGDLKVGEQIVALGAHLLRDGEEVRVPGQDQANVAGSHP
>NZ_CP054205.1|WP_167417415.1|2417063_2420147_+|efflux-RND-transporter-permease-subunit
MSEGRFNISAIAVRERSITVFLIFLIAVAGILAFFKLGRAEDPPFTVKQLTVITAWPGATAQEMQDQVAEPLEKRLQELKWYDRTETYTRPGLAFTMVSLLDSTPPSQVQEEFYQARKKLDDEATKLPAGVIGPLVNDEYSDVTFALFALKAKGEPQRLLVRDAESLRQQLLHVPGVKKVNIIGEQAERIFVSFSHDRLATLGIAPQDIFAALNDQNILTPAGSIDTNGPRVFLRLDGAFDKLEKIRDTPIVAQGRTLKLSDVATVERGYEDPATFVVRNNAEEALLLGVIMREGWNGLDLGKALDAETRKINEHMPLGMTLTKVTDQAVNIDSAVGEFMVKFFVALLVVMLVCFLSMGWRVGVVVAAAVPLTLAIVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYDRLKASAYAWSHTAAPMLSGTLVTAVGFMPNGFAQSTAGEYTSNMFWIVGIALIASWIVAVAFTPYLGVKLLPEIKPVEGGHAAIYNTPRYNRFRRVLTRVIALKWLVAGTVITLFVVAVLGMGLVKKQFFPTSDRPEVMVEVQMPYGTSIEQTSATAAKVEAWLQQQEEAKVITAYIGQGAPRFFLAMAPELPDPSFAKIVVLTASQEARETLKVRLREAVAAGLAPEARVRATQIVFGPYSPFPVAYRVMGPDPTKLREIAGRVQAVMQASPLMRTVNSDWGPLTPTLHLRLDQDRLQAVGLTSSAVAQQLQFLLTGVPITAVREDIRSVQVMGRAAGDIRLDPARIEGFTLVGAAGQRIPLSQVAEVDVRMEDPILRRRDRTPTITVRGDIDEGLQPPDVSGVIVKQLQPIIDTLPNGYRIEQAGAIEESGKAGQAIVPLLPIMIALTLLIIIVQVRSISAMIMVFFTAPLGLIGVVPTLLMFHQPFGINALVGLIALSGILMRNTLILIGQIHHNDQEGLDPFHAVIEATVQRARPVLLTAMAAILAFIPLTHSVFWGTLAYTLIGGTLVGTVMTLVFLPAMYAIWFKIRPDNAGQTEPAN
>NZ_CP054205.1|WP_167417416.1|2420243_2421539_+|beta-ketoacyl-ACP-synthase-II
MSNLEAQKRIVVTGVGIVGPLGCAVEEVWKRLLAGRSGIRNLPDDITEGTGIVVGGQVPSLEEDATAGYDPERIISAKDRKKMDRFIEFALVAAHEALEQAGWHPTEVTDQERTATVIASGVGGFGAIADAVRTNDARGPRRLSPFTAPSFLANMAAGHVSIRHGFKGPLGAPVTACAAGVQAIGDAARIIRAGEADIAICGGTEAAIDRVTLGCFAAARALSTGFAEHPQAASRPFDRDRDGFVMSEGAGLLVIESLEHALRRGAKPLAELVGYGTSADAYHLTAGPEDGSGARRAMEQALRQAAVSPADVQHINAHATSTQVGDKGELAAIRSVFGSGASVAISSTKSATGHLLGAAGGIEAVFTVLALRDQVVPPTLNLNHPDEAADGLDLVALNSRQLPITHALSNGFGFGGVNASVLFRRWAPEAE
>NZ_CP054205.1|WP_167417417.1|2421757_2422546_-|SDR-family-NAD(P)-dependent-oxidoreductase
MTSLPAVLITGASSGIGATYAKRFARRGHDLVLVARDNARLETLAAQLREENGVAVEVFQADLTQAADLAALETRLREDARIGILINNAGMAQSGGIVNQSAQALDQLIALNVVALTRLAAAVAPRFAQAGNGSIINLGSVVGFAPEFGMSVYGATKAFVLFLSQGLTVELAAKGVYIQAVLPAATRTEIWERAGIDINALPEVMDVDELVDAALLGFDRREPVTIPPLHVEGRWDQLDQARQGLLSDIRQARAAERYQAQS
>NZ_CP054205.1|WP_167417418.1|2422682_2423258_+|TetR-family-transcriptional-regulator
MKVSKQQAQANRAHIVQTASALFRERGYDGVGIADLMAAAGFTQGGFYKHFESKADLMAQASACGLAESAARTAGASTEAFVNLYLSREHRDQRATGCTLAALCSDAARKEDEVRAAFAAGIEAQLSAMHEAKADGEEQDPAARAANLALMAQVLGGLIMSRACPDDSALADEILAACRADIQGRQDEEQS
>NZ_CP054205.1|WP_052198944.1|2423364_2423589_-|general-stress-protein
MSTQDKKGQTSVNEAGSKGGQHSGGNFKNDPQRAAEAGSKGGQHSGGNFANDREKASQAGRKGGEHSHGGGRSS
>NZ_CP054205.1|WP_034137778.1|2423749_2423926_-|general-stress-protein
MPTSNKNPGNFANDHERASEAGRKGGQASGGNFANDREKAAQAGRKGGQHSHGGGRTS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP054205_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054205_4

3359995-3360105

Orphan

Consensus_repeat	Method
TGGGTGCCAGGGTGCTTTCCATGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054205_4

>merge|NZ_CP054205|4|3359995-3360105|CRISPRCasFinder
TGGGTGCCAGGGTGCTTTCCATGCCTGTACGCGCCAGGCTGGGTGCCAGGACTGATGCTTTCCCACAATTTTGTACGCGCCAGGCTGGGTGCCAGGGTGCTTTCCATGCCT

>NZ_CP054205|4|3|3359995-3360105|CRISPRCasFinder
TGGGTGCCAGGGTGCTTTCCATGCCT	GTACGCGCCAGGCTGGGTGCCAGGACTGATGCTTTCCCACAATTTTGTACGCGCCAGGC
TGGGTGCCAGGGTGCTTTCCATGCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054205.1\|WP_167418039.1\|3349417_3350695_-\|HAAAP-family-serine/threonine-permease	unknown	unknown	gnl\|CDD\|273283
NZ_CP054205.1\|WP_034098207.1\|3353116_3353884_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180802
NZ_CP054205.1\|WP_167418657.1\|3373083_3374721_+\|BatD-family-protein	unknown	unknown	gnl\|CDD\|379280
NZ_CP054205.1\|WP_034098205.1\|3352039_3353107_+\|phosphotransferase-family-protein	unknown	unknown	gnl\|CDD\|270703
NZ_CP054205.1\|WP_169867879.1\|3356351_3357677_+\|C4-dicarboxylate-transporter-DctA	unknown	unknown	gnl\|CDD\|183850
NZ_CP054205.1\|WP_034138344.1\|3367242_3367596_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_167418658.1\|3371338_3373087_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP054205.1\|WP_034098225.1\|3368837_3369770_+\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_CP054205.1\|WP_034098214.1\|3357747_3358449_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP054205.1\|WP_167418043.1\|3358466_3359153_+\|FCD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224715
NZ_CP054205.1\|WP_167418659.1\|3370253_3371342_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238744
NZ_CP054205.1\|WP_017479925.1\|3367872_3368832_+\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP054205.1\|WP_167418040.1\|3350956_3351910_+\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240633
NZ_CP054205.1\|WP_034098200.1\|3346685_3349295_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP054205.1\|WP_167418041.1\|3353954_3355388_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|224089
NZ_CP054205.1\|WP_173603516.1\|3374913_3375675_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_167418042.1\|3355503_3356133_-\|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl\|CDD\|377025
NZ_CP054205.1\|WP_173603517.1\|3375671_3375923_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_094066594.1\|3361896_3366765_-\|NAD-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|377452
NZ_CP054205.1\|WP_167418660.1\|3369766_3370261_+\|DUF4381-family-protein	unknown	unknown	gnl\|CDD\|379552

Protein	Function_ID	Function_description	E-value
NZ_CP054205.1\|WP_167418039.1\|3349417_3350695_-\|HAAAP-family-serine/threonine-permease	gnl\|CDD\|273283	TIGR00814, membrane_transport_protein_YhjV, serine transporter. The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family- serine/threonine subfamily (TC 2.A.42.2) The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.//added GO terms, none avaialbelf or ser/thr specifically [SS 2/6/05] [Transport and binding proteins, Amino acids, peptides and amines].	3.47004e-172
NZ_CP054205.1\|WP_034098207.1\|3353116_3353884_+\|SDR-family-oxidoreductase	gnl\|CDD\|180802	PRK07035, PRK07035, SDR family oxidoreductase.	0
NZ_CP054205.1\|WP_167418657.1\|3373083_3374721_+\|BatD-family-protein	gnl\|CDD\|379280	pfam13584, BatD, Oxygen tolerance. This family of proteins carries up to three membrane spanning regions and is involved in tolerance to oxygen in in Bacteroides spp.	1.39095e-101
NZ_CP054205.1\|WP_034098205.1\|3352039_3353107_+\|phosphotransferase-family-protein	gnl\|CDD\|270703	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins. This subfamily is composed of the N-terminal domains of vertebrate ACAD10 and ACAD11, and similar uncharacterized bacterial and eukaryotic proteins. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 are both significantly expressed in human brain tissues. They contain a long N-terminal domain with similarity to phosphotransferases with a Protein Kinase fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. ACAD11 utilizes substrates with carbon chain lengths of 20 to 26, with optimal activity towards C22CoA. ACAD10 may be associated with an increased risk in type II diabetes. The ACAD10/11-like subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	1.30048e-96
NZ_CP054205.1\|WP_169867879.1\|3356351_3357677_+\|C4-dicarboxylate-transporter-DctA	gnl\|CDD\|183850	PRK13027, PRK13027, C4-dicarboxylate transporter DctA; Reviewed.	0
NZ_CP054205.1\|WP_167418658.1\|3371338_3373087_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.77684e-10
NZ_CP054205.1\|WP_034098225.1\|3368837_3369770_+\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	8.64136e-38
NZ_CP054205.1\|WP_034098214.1\|3357747_3358449_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.80269e-43
NZ_CP054205.1\|WP_167418043.1\|3358466_3359153_+\|FCD-domain-containing-protein	gnl\|CDD\|224715	COG1802, GntR, Transcriptional regulators [Transcription].	8.07804e-41
NZ_CP054205.1\|WP_167418659.1\|3370253_3371342_+\|VWA-domain-containing-protein	gnl\|CDD\|238744	cd01467, vWA_BatA_type, VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup are bacterial in origin. They are typified by the presence of a MIDAS motif.	6.8499e-69
NZ_CP054205.1\|WP_017479925.1\|3367872_3368832_+\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	4.54058e-91
NZ_CP054205.1\|WP_167418040.1\|3350956_3351910_+\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|240633	cd12156, HPPR, Hydroxy(phenyl)pyruvate Reductase, D-isomer-specific 2-hydroxyacid-related dehydrogenase. Hydroxy(phenyl)pyruvate reductase (HPPR) catalyzes the NADP-dependent reduction of hydroxyphenylpyruvates, hydroxypyruvate, or pyruvate to its respective lactate. HPPR acts as a dimer and is related to D-isomer-specific 2-hydroxyacid dehydrogenases, a superfamily that includes groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric.	2.55007e-137
NZ_CP054205.1\|WP_034098200.1\|3346685_3349295_+\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP054205.1\|WP_167418041.1\|3353954_3355388_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	2.41249e-133
NZ_CP054205.1\|WP_167418042.1\|3355503_3356133_-\|DNA-3-methyladenine-glycosylase-I	gnl\|CDD\|377025	pfam03352, Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.	1.93614e-106
NZ_CP054205.1\|WP_094066594.1\|3361896_3366765_-\|NAD-glutamate-dehydrogenase	gnl\|CDD\|377452	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase. This family consists of several bacterial proteins which are closely related to NAD-glutamate dehydrogenase found in Streptomyces clavuligerus. Glutamate dehydrogenases (GDHs) are a broadly distributed group of enzymes that catalyze the reversible oxidative deamination of glutamate to ketoglutarate and ammonia.	0
NZ_CP054205.1\|WP_167418660.1\|3369766_3370261_+\|DUF4381-family-protein	gnl\|CDD\|379552	pfam14316, DUF4381, Domain of unknown function (DUF4381). This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 158 and 180 amino acids in length.	4.52434e-35

>NZ_CP054205.1|WP_167418043.1|3358466_3359153_+|FCD-domain-containing-protein
MTAHALQRNPSLPALRLVAGKKPSVDDIYPRLFDAILEQRIAPSSRFTEEGLGETFGVSRSVIRRVLAKLSHQQVIILRPNQRAQVAAPDSLQARQILEARRMTEVTVVQLACAQATPAQIRPLRDLIARERECIERDQRGPAIRLSGEFHLQLAAIAGNAPLAQFLNSLVPLTSLVIAQFEAKACTYCAWQEHVAIVDAIEQRDSNTAVSLMTQHLDHLESKLLKHH
>NZ_CP054205.1|WP_034098214.1|3357747_3358449_+|FadR-family-transcriptional-regulator
MISTSTVVNSVVEKLRAALARGQWRRGEMLPGQRELAEQLGISRPSLREAVIVLETLGLVRSMPGKGVVVLETSVSDPQSSDAVADASLEDILQLRYTLEPFIVGLVAQSISSKEVGQLRLTLMDMREALDAGDAEAGLNAYVDFHEELFALTSNPIFQNVVQQTRNALKQSAQVLRNSPEHLAERLQENEAVVRAIRNKNSALASAEMRRHILQEGLRMGIALNIPDDHLGS
>NZ_CP054205.1|WP_169867879.1|3356351_3357677_+|C4-dicarboxylate-transporter-DctA
MEIPPMLRWCSRSIFLQVVIGLMLGVVCGLALPEFSSQLKPLGDGFIKLIKMLIGLIVFCVVVSGISGAGDLKKVGRIGLKSVIYFEVLTTIALVIGLVMAFSTGIGTGANIHLEQLSSAGLNELADKGQHIRGTSQFLMDLIPNSVIGAFADNNVLQVLLFSVLFGSALNLVGEAASGISRLINELSHVIFRIMGMIVRLAPIGVFGAIAFTTSTYGLDSLQHLGSLVGLFYLTCFAFVGVILGVVMRLSGLRMLPLLKYLREELLIVMGTASSDAVLPQIMRKLEHLGIGSSTVGLVIPTGYSFNLDGFSIYLTLAIVFIANATGTPLSMTDLLTILLVSLITSKGAHGIPGSALVILAATLTAIPAIPVVGLVLVLAVDWFMGIGRALTNLIGNCVATVAIARWEKDIDLQRANKVLDGQQGYAFQAKKPVLPAHQEF
>NZ_CP054205.1|WP_167418042.1|3355503_3356133_-|DNA-3-methyladenine-glycosylase-I
MDTPGLSTDKHGHRHCAWRGAAPEYLHYHDHEWGVPVADDSQLYEKICLEGFQAGMAWITILRKREQFRAAFDGFDFRRVAQYGEADILRLMQNPGIVRNRAKIVSTINNARRACELVDETGSLAQWLWAFEPGPQERPAVVDLAYWTGNPTSPASVRLSKALKKRGWTFVGPTTMYALMQAMGMVNDHLEGCACRPQIEALRRQFKRP
>NZ_CP054205.1|WP_167418041.1|3353954_3355388_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MELHIVINGRKDLAAQLYQQLREAIAAGRLTAGAQLPPSRLLAEQLGVSRKTVSDTYATLTYEGLLVGRIGRGTFVNAWAPQPDRVQTATDLACSANLAKWQALPSPMHHPANDKRLRYEFIGGATSRQQFPLDEWRRCTQHALRRIAEHSGFYSQPEGLPALRSAIAGHIAFSRGVKCRDSDIVVTNGAQQALDLLARVVLEPGSIVAMEDPGYTPARQLFTARGAHVASVPVDAQGIRVDQIPDGTRLIYVTPSHQFPLGMPMSPARREALLARAFDLGAIIIEDDYDSEFRYEGRPTDSLQSLDSRGVVAYVGTFSKTLLPELRLGYVVLPPAIHGAVLKAKQLTDQHSSTLPQWALAKFISEGYLLKHIRRCHTVYAGRRERILERLAGDLSPWFETVPTVAGFHLAALCKVPVNIALLRELARQVDVGLYPLEVFFHDTPVRAGLIVGFGAIELLDIDPALDRVRDILLKIA
>NZ_CP054205.1|WP_034098207.1|3353116_3353884_+|SDR-family-oxidoreductase
MSKTHLFDLDGKIAFVSGASRGIGEAIAKLLAQQGAHVIVSSRKLEGCQHVADAIIADGGKATAVACHIGEMEQISQVFAGIREQFGRLDILVNNAATNPQFCNVLDTDLGAFQKTVDVNIRGYFFMSVEAGKLMRENGGGSIINVASINGISPGIFQGIYSVTKAAVINMTKVFAKECAEFGIRCNALLPGLTDTKFASALVKNDSILKMALAQIPLKRVADPSEMAGAVLFLASDASSYTTGVSLNVDGGFLS
>NZ_CP054205.1|WP_034098205.1|3352039_3353107_+|phosphotransferase-family-protein
MALNDQSTQIRPGEELDAGLIDPYLKAHIPGLSGTPTISQFPGGASNLTYLLEYPDQEFVLRRPPFGHKAKSAHDMGREFRILNQLKDGFPYCPKAYVHCTDESVIGAEFYVMERVNGIILRSDLPAELGLDAAKTQALCKSFIDKFVELHQVDYTACGLADLGKPEGYVARQIRGWSDRYEKALTPDAPKWEAVRAWLNDKMPADHPTSSIVHNDYRFDNVILDPHNPMQIIGVLDWELTTLGDPLMDLGNTLAYWIEAADPAPVQLMRRQPSNAPGMLTRREFVDYYAERAGIRIDNFDFYYTYGLFRLAGIVQQIYYRFFHGQTQDKRFAQFIQMNALLEQMSLNVISKSAL
>NZ_CP054205.1|WP_167418040.1|3350956_3351910_+|2-hydroxyacid-dehydrogenase
MTTTVLVLVETINDYLPIIESNDFHVILAPTPAERAHAIKAHGGQIQAVLTRGPLGLYAEEIAALPQLEIICVIGAGYEHVDLQAASNRGIVVTNGAGVNAPSVADHAMALLLSLVRGIPQNDAAVRRGEWPKVMRPSLGGKHLGILGLGAVGLEIAKRAALGFGMEISYHNRQPRDDVDYTYCATALDLARTADFLILATPGGDGTRHLIDRRVLDALGPHGYLVNIGRGSVVVTADLIAALEQRRIAGAALDVFDDEPKVPDALKRLGNTVLTSHVAGLSPEAAHDTVQRVADNLVEYFAGRPVLTPVALPPPVK
>NZ_CP054205.1|WP_167418039.1|3349417_3350695_-|HAAAP-family-serine/threonine-permease
MNDQANSVDERYATTPATLTRWSRQDTTWMLGLFGTAIGAGTLFLPINAGLGGFWPLVILALLAFPMTFFAHRGLTRFVLSGREGSDITDVVEEHFGIKAGALITLLYFFAIFPILLIYSVALTNTVGSFMEHQLHILPPPRAILSFVLILGLLAVVRCGEQVIVKAMSLMVYPFIVALLFLAVYLVPHWTGGILSTAREVPAPSALLNTLWLAIPVMVFSFNHSPIISAFAVDQKRQYGANADERSSQILSRAHLLMVAMVLFFVFSCVLTLSPAQLAEAKAQNLSILSYLANHFNNPTIAFAAPLIAFVAIAKSFLGHYIGASEGLKGLVLKTGLRPAAKTLDRMTAAFMLVVCWIVATLNPSILGMIETLGGPVIASILFLMPMYAIRKVPAMAKYRGQASNVFVTAVGLVAITALVYSLMA
>NZ_CP054205.1|WP_034098200.1|3346685_3349295_+|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEAYRKHIEERAALGIVPQPLNAEQTAGLVELLKNPPAGEEEFLVDLITNRIPPGVDEAAYVKAGFLSALAKGEATSPLIDKKRAVELLGTMQGGYNIVTLVELLDDAELAPVAAAQLKHTLLMFDAFHDVAEKAKNGNEHAKAVLQSWADGEWFKNRPTLADKISLRVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKMAREGIVPDEQGKTGPMKQIEEMRGQGFPIAYVGDVVGTGSSRKSATNSVLWFFGDDVPYVPNKRAGGFCFGSKIAPIFYNTMEDAGALPIEFDVTNMHMGDVIDLYPHAGKVCKHGTDEVLTTFEMKTPVLLDEVRAGGRIPLIIGRGLTDKARAELGLGPTDLFKLPEAPVDTGKGFTLAQKMVGKACGLPEGKGVRPGTYCEPKMTTVGSQDTTGPMTRDELKDLACLGFSTDLVMQSFCHTAAYPKPIDVTTHHTLPDFIMTRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPMGISFPAGSGLVAFAAATGVMPLDMPESILVRFKGKMKPGITLRDLVHAIPYYAIQAGLLTVEKKGKKNAFSGRILEIEGLNDLTLEQAFELSDASAERSAAGCTIKLSKESITEYLNSNITLLRWMIGEGYGDARTLERRAQAMEAWVANPELMEADADAEYAEIIEIDLAEINEPILCAPNDPDDARLLSSVAGEKIDEVFIGSCMTNIGHFRAAGKLLEQVKGQLPTRLWLSPPTKMDAHQLTEEGYYGIYGKAGARMEMPGCSLCMGNQARVEPNSTVVSTSTRNFPNRLGDGANVYLASAELAAVASTLGRLPTVEEYMGYAAKLDTMASDVYRYLNFDQIAEFRKIAASANIPVLQA
>NZ_CP054205.1|WP_094066594.1|3361896_3366765_-|NAD-glutamate-dehydrogenase
MAFFTAASKADFQHQLQAALAQHISEQALPQVALFAEQFFGIISLDELTQRRLSDLAGCTLSAWRLLERFDHTQPQVRVYNPDYERHGWQSTHTAVEVLHHDLPFLVDSVRTELNRRGYSIHTLQTTVLSVRRGSKGELQEILAKGTQGEGIQQESLMYLEIDRCANAAELSVLSKELEQVLGEVRVAVADFEPMKAKVQDLLAGIDASQFSIDGEEKAEIKNFLEWLVGNHFTFLGYEEFVVRDEADGGHIEYDASSFLGLTKLLRAGLTAEDLRIEDYAVSYLREPTVLSFAKAAHPSRVHRPAYPDYVSIREIDADGKVIKECRFMGLYTSSVYGESVRVIPYIRRKVAEIERRSGFQAKAHLGKELAQVVEVLPRDDLFQTPVDELYSTVMSIVQIQERNKIRVFLRKDPYGRFCYCLAYVPRDIYSTEVRQKIQQVLMERLKASDCEFWTFFSESVLARVQLILRVDPKNRLDIDPLQLEKEVIQACRSWQDDYASLVVESFGEAHGTNVLADFPKGFPAGFRERFAAHSAVVDMQHLLSLTEANPLVMSFYQPLGQVSGQRELHCKLYHADTPLALSDVLPILENLGLRVLGEFPYRLRHANGREFWIHDFAFIAAEGVNLDIQQLNDTLQDAFVHIVHGDAENDAFNRLVLTAGLPWRDVALLRAYARYLKQIRLGFDLGYIASTLNNHTDIARELTRLFKTRFYLARKLTADDLEDKQQRLEQAILSALDDVQVLNEDRILRRYLDLIKATLRTNFYQTDANGQNKSYFSFKFDPRAIPELPKPVPKFEIFVYSPRVEGVHLRFGNVARGGLRWSDREEDFRTEVLGLVKAQQVKNSVIVPVGAKGGFLPRRLPLGGSRDEIAAEGIACYRIFISGLLDITDNLKDGALVPPANVVRHDDDDPYLVVAADKGTATFSDIANGIAIDYGFWLGDAFASGGSAGYDHKKMGITAKGAWVGVQRHFRERGINVQEDSITVVGVGDMAGDVFGNGLLMSDKLQLVAAFNHLHIFIDPNPNPATSFVERKRMFELPRSAWTDYDTSIMSEGGGIFSRSAKSIAISPQMKERFDIQADKLTPTELLNALLKAPVDLLWNGGIGTYVKASTESHADVGDKANDALRVNGNELRCKVVGEGGNLGMTQLGRVEFGLNGGGSNTDFIDNAGGVDCSDHEVNIKILLNEVVQAGDMTDKQRNQLLASMTDEVGSLVLGNNYKQTQALSLAARKAYERAAEYKRLMSDLEGRGKLDRAIEYLPTEEQLTERASTGKGLTRPELSVLISYSKIDLKEALLKSLVPDDDYLTRDMETAFPPSLVAKFGEAMRRHRLKREIVSTQIANDLVNHMGITFVQRLKESTGMSPANVAGAYVIVRDIFHLPHWFRQIEALDHQVSADVQLELMDELMRLGRRATRWFLRSRRNEQDAGRDTAHFGPHLAALGLKLDELLEGPTREGWQNRYQAYTEAGVPELLARMVAGTTHLYTLLPIIEAADVTGHDAAEVAKAYFAVGSALDLPWYLQQISDLPVANNWQAQAREAFRDDVDWQQRAITISVLQMADAPQDMEARVALWLEQHQDMADRWRAMMVEIRAAVGTDYAMYAVANRELLDLAMSGQSVLQSA
>NZ_CP054205.1|WP_034138344.1|3367242_3367596_+|hypothetical-protein
MLQLKTDALMATPCDEEEDNMAMLCCHGKNGEMFMLSRYPDEDEVELTWDYEPSTLDGLKVTLSDTTLRIELAAGDADALGGKDHLEITHATAASDLAEVEQTLQNILKGTGTYTRA
>NZ_CP054205.1|WP_017479925.1|3367872_3368832_+|MoxR-family-ATPase
MEHREALLALRTFLSTQILGQEKLIERLLIALLADGHMLVEGAPGLAKTKAIKELAEGIEAQFHRIQFTPDLLPADITGTEIYRPETGSFVFQQGPIFHNLVLADEINRAPAKVQSALLEAMAERQVSVGRSTYDLSPLFLVMATQNPIEQEGTYPLPEAQLDRFLMHVKIGFPDAAVERRILQQARGEALNGETKPERRVSQQAIFAARKEILGLYMADAVEEYLVQLVMATRTPAKFDPEMAEWIAYGASPRGSIALDRCARAHAWLAGRDFVSPEDIQAVLFDVLRHRIILSFEAEAAGIDQDRVVQRILDVVAVA
>NZ_CP054205.1|WP_034098225.1|3368837_3369770_+|DUF58-domain-containing-protein
MNASDGIRVTLSELIEMRHRVREVQLFSTPSQRSPLIGLHHSKLRGRGVDFDQVRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIFIMVEQSCRLFFGSGQMFKSVLAAQAASLIGWAALGHNDRVGGLVFGDNEHYEIKPRRSKQSLLQLLNRLVRVNQSLNTDTRPEADALGMALRRGREVLRPGSLVIVICDERALSEGAEQQLSLLSRHCDLLLLPISDPLDHALPAAGLLRFAERGAQLELDTLNYDLRQAYKAQAEARSARWELLAQKLRVLLMPLSTQSEMVEQLREYLNPQRPVKKQ
>NZ_CP054205.1|WP_167418660.1|3369766_3370261_+|DUF4381-family-protein
MSSLEQLQPLIAPPAIGFWPPAPGWWLLLLLIPLLGWGVWSLRRFLPTRRPVVRAEQPLDPLRIAALAELALMPKPYDGAPAGAWLQQLNGLLKRLCRNDYPYSQSHTLNGRKWLAFLDNRCPAAGLTRWMVLVEGAYKPECKLDDKAIAGLTQAVDTWIRKHV
>NZ_CP054205.1|WP_167418659.1|3370253_3371342_+|VWA-domain-containing-protein
MFEFAWPWIFLLLPLPWLMRQVLPAADSGEPALKVSYLSDLESLARRRARSNLPGWRQQAPFVVLWLLLLTAAARPEWLGEPLPIAASGRDLLVAVDVSGSMDFPDMHWQDEDISRLNLVQHLLGDFLESREGDRVGLILFGSQAYLQAPLTFDRRTVRTWLDEARIGIAGKNTAIGDAIGLALKRLRQRPAQSRVLILVTDGANNAGQIDPLTAARLAAEEGVKIYPIGIGADPEQTGSLGILGVNPSLDLDEPALKAIAEATGGQYFRARDGAELLAIKEALDTLEPVEQQPTQARPALALYSAPLALALILSLLLVIQERWPDNALQRGFDKLASKGMFLQPKPQWRQRLKRLRLRRRR
>NZ_CP054205.1|WP_167418658.1|3371338_3373087_+|tetratricopeptide-repeat-protein
MIDLWPHWFRPWWLLLLPLLGWLLWQLWHRQKRAGRWQMILPPAFHGVLLSGGNGRESKSPWVVLGIAWLLALVALLGPSWQRVEQSSQKPSDPLVVLLELTPEMLATDSPPNRLEQARRKLYDLLQARSDAQTAIVVYAGSAHTLVPLSDDLATSGNLLEALRPSIMPEPGHRADLAVEKALGLLNQAGLGQGRLLLIGSSLSKPERQGIRLLLQSAQAPSLSILGIGSREGTPVTQENGEFLKDEQGAILVPRLDSPTLKAFASEMGGRYRAARLDDKDLRQLGMLDAPQTLRDDGQRLRLDTWADQGYWLLLPLLLLAACAGRRGWLFCLPLLLLSAPQPSYAFELTDLWLRPDQQGQYLLKKQRPAQAAERFEDPQWQGVALYQAGNYAEAAKRFAQSNDAYAHYNRGNALAKAGELEAAVDAYDQALEAQPDLHPALKNKALVEALIQEQAQAQAEQKPESPAENPDDEPHQPGQTAQPGADGQTGTGGEASPQGQGEAGNGDPQAGAKPPSGDNEVPGSELGDEQTTTPPLRRTDASLDEQRQALEQWLRQIPDNPGELLRRKFWYEQQQHQDKTR
>NZ_CP054205.1|WP_167418657.1|3373083_3374721_+|BatD-family-protein
MSRPTLLLLLALSASTAQAANLVASVDRSRLNSGETVELTVESSDVTQFGKPDLSPLDAQFEVSGTRQINQLTTLGGDNHATTRWIITLLPKENGTVVIPPLQVGALQTQPITLQVIETASQNTSAELAPVFVEANLDQSSVYVQAQALLTVRVYHSVSLYDDSSLTPLQIADARVEQLGESRTYEKVINSIRHGVIETRYAIYPQHSGSLEVGAQTFSATLVESRPPQENTLQGTKPGKLIHVSSAPLQLTVKPKPALYPADAPWLPARSLTLSESWNPEPQQLQVGDSLTRSLTVKAEGLSSAQLPALPSTEISGLRRYPDQPVLGNQTSDRGLIGSREDREALVPSRAGALELPAVDVVWWNTHEDHLERTSLPARTLQVANNPSLMVDTPATPTIITAPDDSRLWLWQLSTLLLACTTLLGFGLWWRARRQPAVQRAAQTGPSPRTLLDDLKRATQANDPQATRQALDAWARQQPETLADMAARFVPLSDALDGLNGALYSESGQYWLGEDLWRAIKAIPMAEREADPTTDTTSLPPLYPK
>NZ_CP054205.1|WP_173603516.1|3374913_3375675_+|hypothetical-protein
MSDTPLDPENNSISGGLPAASLPVPYQSPSLERPEPRRIEDLDHPYSAFPWVDLQLAAHPENAAYGLGIRHVRPYALFVFENWQNLNFLDYFAFYLEDLTFPVAEDYVWSSANPQQYLAIPSEFIPEGEVSSYGRVIRIGSGNESTSPVRTLLIKTDRPGGVDKDPGIPWHTGLVMRVEGFPEGSNIGAGDVVGGLWCLIDLYEHIRQNDVIELSWDGEFVQHTVSPAEAAGQDRFGSLCPNRSLIREGNLGK
>NZ_CP054205.1|WP_173603517.1|3375671_3375923_+|hypothetical-protein
MTLRFRVHDVVENFSGEKYQYSKPYFLDAELDPSLLGPPIFLVDGEELESRQIDFDTQSGSTFEVIALTDKQFPSPSPGIRSL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP054205_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054205_5

3840870-3840975

Orphan

Consensus_repeat	Method
CACACTGATCCTGTGTCAGACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054205_5

>merge|NZ_CP054205|5|3840870-3840975|CRISPRCasFinder
CACACTGATCCTGTGTCAGACACAAAAAGCGCCACCGAACCAATATGGTGGTGAATCAGCTATATCGGGTCAAGCCGCCCTCCACACTGATCCAGTGTCAGACACA

>NZ_CP054205|5|4|3840870-3840975|CRISPRCasFinder
CACACTGATCCTGTGTCAGACACA	AAAAGCGCCACCGAACCAATATGGTGGTGAATCAGCTATATCGGGTCAAGCCGCCCTC
CACACTGATCCAGTGTCAGACACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054205.1\|WP_034138650.1\|3849524_3850145_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|312013
NZ_CP054205.1\|WP_034098871.1\|3841268_3841727_+\|transposase	unknown	unknown	gnl\|CDD\|224854
NZ_CP054205.1\|WP_034098858.1\|3831041_3831896_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP054205.1\|WP_034098885.1\|3850261_3850627_+\|copper-homeostasis-periplasmic-binding-protein-CopC	unknown	unknown	gnl\|CDD\|225247
NZ_CP054205.1\|WP_167417911.1\|3846762_3848130_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236967
NZ_CP054205.1\|WP_167417913.1\|3851812_3853075_+\|outer-membrane-porin,-OprD-family	unknown	unknown	gnl\|CDD\|335381
NZ_CP054205.1\|WP_034098854.1\|3827922_3828558_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP054205.1\|WP_167417912.1\|3850630_3851488_+\|copper-homeostasis-membrane-protein-CopD	unknown	unknown	gnl\|CDD\|224195
NZ_CP054205.1\|WP_167417908.1\|3841788_3843072_-\|allantoate-amidohydrolase	unknown	unknown	gnl\|CDD\|237250
NZ_CP054205.1\|WP_094066499.1\|3839039_3840458_+\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_CP054205.1\|WP_034138643.1\|3828649_3829960_-\|trigger-factor	unknown	unknown	gnl\|CDD\|234956
NZ_CP054205.1\|WP_167417910.1\|3845175_3846615_+\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP054205.1\|WP_052198982.1\|3833075_3833738_-\|peptidase-C39-family-protein	unknown	unknown	gnl\|CDD\|239109
NZ_CP054205.1\|WP_167417725.1\|3837889_3839056_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP054205.1\|WP_167389900.1\|3833925_3834078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_167417726.1\|3834678_3837900_+\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP054205.1\|WP_167417909.1\|3843096_3844584_-\|cytosine-permease	unknown	unknown	gnl\|CDD\|271378
NZ_CP054205.1\|WP_167417727.1\|3834074_3834485_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054205.1\|WP_034098881.1\|3848129_3849404_+\|NAD-dependent-dihydropyrimidine-dehydrogenase-subunit-PreA	unknown	unknown	gnl\|CDD\|236237
NZ_CP054205.1\|WP_034114272.1\|3832103_3833027_+\|D-alanyl-D-alanine-endopeptidase	unknown	unknown	gnl\|CDD\|236952

Protein	Function_ID	Function_description	E-value
NZ_CP054205.1\|WP_167417912.1\|3850630_3851488_+\|copper-homeostasis-membrane-protein-CopD	gnl\|CDD\|224195	COG1276, PcoD, Putative copper export protein [Inorganic ion transport and metabolism].	4.42172e-27
NZ_CP054205.1\|WP_034098871.1\|3841268_3841727_+\|transposase	gnl\|CDD\|224854	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.6622e-08
NZ_CP054205.1\|WP_034098858.1\|3831041_3831896_+\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP054205.1\|WP_034098885.1\|3850261_3850627_+\|copper-homeostasis-periplasmic-binding-protein-CopC	gnl\|CDD\|225247	COG2372, CopC, Uncharacterized protein, homolog of Cu resistance protein CopC [General function prediction only].	2.55654e-29
NZ_CP054205.1\|WP_167417911.1\|3846762_3848130_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|236967	PRK11749, PRK11749, dihydropyrimidine dehydrogenase subunit A; Provisional.	0
NZ_CP054205.1\|WP_167417913.1\|3851812_3853075_+\|outer-membrane-porin,-OprD-family	gnl\|CDD\|335381	pfam03573, OprD, outer membrane porin, OprD family. This family includes outer membrane proteins related to OprD. OprD has been described as a serine type peptidase. However the proposed catalytic residues are not conserved suggesting that many of these proteins are not peptidases.	0
NZ_CP054205.1\|WP_167417908.1\|3841788_3843072_-\|allantoate-amidohydrolase	gnl\|CDD\|237250	PRK12893, PRK12893, Zn-dependent hydrolase.	0
NZ_CP054205.1\|WP_034098854.1\|3827922_3828558_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	9.97963e-156
NZ_CP054205.1\|WP_094066499.1\|3839039_3840458_+\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	1.3129e-95
NZ_CP054205.1\|WP_034138643.1\|3828649_3829960_-\|trigger-factor	gnl\|CDD\|234956	PRK01490, tig, trigger factor; Provisional.	0
NZ_CP054205.1\|WP_167417910.1\|3845175_3846615_+\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP054205.1\|WP_052198982.1\|3833075_3833738_-\|peptidase-C39-family-protein	gnl\|CDD\|239109	cd02549, Peptidase_C39A, A sub-family of peptidase family C39. Peptidase family C39 mostly contains bacteriocin-processing endopeptidases from bacteria. The cysteine peptidases in family C39 cleave the "double-glycine" leader peptides from the precursors of various bacteriocins (mostly non-lantibiotic). The cleavage is mediated by the transporter as part of the secretion process. Bacteriocins are antibiotic proteins secreted by some species of bacteria that inhibit the growth of other bacterial species. The bacteriocin is synthesized as a precursor with an N-terminal leader peptide, and processing involves removal of the leader peptide by cleavage at a Gly-Gly bond, followed by translocation of the mature bacteriocin across the cytoplasmic membrane. Most endopeptidases of family C39 are N-terminal domains in larger proteins (ABC transporters) that serve both functions. The proposed protease active site is conserved in this sub-family of proteins with a single peptidase domain, which are lacking the nucleotide-binding transporter signature or have different domain architectures.	2.66551e-26
NZ_CP054205.1\|WP_167417725.1\|3837889_3839056_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	8.48853e-58
NZ_CP054205.1\|WP_034138650.1\|3849524_3850145_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|312013	pfam08362, TetR_C_3, YcdC-like protein, C-terminal region. This family comprises proteins that belong to the TetR family of transcriptional regulators. They bear particular similarity to YcdC, a putative HTH-containing protein. This family features the C-terminal region of these sequences, which does not include the helix-turn-helix.	9.05283e-65
NZ_CP054205.1\|WP_167417726.1\|3834678_3837900_+\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP054205.1\|WP_034114272.1\|3832103_3833027_+\|D-alanyl-D-alanine-endopeptidase	gnl\|CDD\|236952	PRK11669, pbpG, D-alanyl-D-alanine endopeptidase; Provisional.	0
NZ_CP054205.1\|WP_034098881.1\|3848129_3849404_+\|NAD-dependent-dihydropyrimidine-dehydrogenase-subunit-PreA	gnl\|CDD\|236237	PRK08318, PRK08318, NAD-dependent dihydropyrimidine dehydrogenase subunit PreA.	0
NZ_CP054205.1\|WP_167417909.1\|3843096_3844584_-\|cytosine-permease	gnl\|CDD\|271378	cd11485, SLC-NCS1sbd_YbbW-like, uncharacterized nucleobase-cation-symport-1 (NCS1) transporter subfamily, YbbW-like; solute-binding domain. NCS1s are essential components of salvage pathways for nucleobases and related metabolites; their known substrates include allantoin, uracil, thiamine, and nicotinamide riboside. This subfamily includes the putative allantoin transporter Escherichia coli YbbW (also known as GlxB2). NCS1s belong to a superfamily which also contains the solute carrier 5 family sodium/glucose transporters (SLC5s), and solute carrier 6 family neurotransmitter transporters (SLC6s).	0

>NZ_CP054205.1|WP_094066499.1|3839039_3840458_+|efflux-transporter-outer-membrane-subunit
MRPRLKPLAALVLLGLQGCSMAPGYTTPALELPAHYREQTSTGPWHSAQPNDQLAAQWWTLYHDATLDHLQQQLLQANPDLAAALAHFDAAQAYASQLHAGLFPQINASAQPLRQRQSDSRPLRGTTQPSVYNSNTAGFSLSYDLDLWGRIRNQVAAGDAQAQASGDDLAVARLSLQRQLATLYVQLNGLDAQARILNSSLEDFSQALQLTRSRYEGQIASELDLTRAQNQLSEARAQLDDVRGQRNLIEHALAELIGVAASDFTLAPTAQLIALPAIPSQLPSQLLQRRPDIAAAERRVFAANANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPILDGGRLSANERQAKAEFEEASAQYRSQVLKAVREVEDNLAQLRDLQQQAQDEQAAADAAQHTQSLAMNSYQAGAVSYLDVVTAQTEALQAQRTLQAVQTRQLQASVGLITALGGGWQPGA
>NZ_CP054205.1|WP_167417725.1|3837889_3839056_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MSSDQKPSRKRLMLLGVGGLTLAALLVANGLHARTLHAQSVSAWTQAAAIPHVSVFQPQHNAVGDTLRLPAHLEAWSTAPIHARVSGYLKDWKVDIGSQVKAGQVLAEIDSPDLDQQLAQAHARLVQEQANAHLAATTATRWQNLLASHSVSRQEADEKTSNAAAAKANVQAAAADVARLSALQSYKTLRAPFAGTITARNTDIGQLIKADTDSDPELFNIADTHQLRLYVPVPQNYAAVIHPGLEAELSVPEHPGMHFKARLIGDSTAIDRRSGTLLAQFVADNPNGELLPGDYAEATLPIPTDTHGVSIPASALIFRAQGTQVAMLDGHNHVHLQSIHIGLDLGDRLVIDQGLNAADRVVDNPPDALREGDPVQLAAAGGAHAPKA
>NZ_CP054205.1|WP_167417726.1|3834678_3837900_+|efflux-RND-transporter-permease-subunit
MLGLVKTALHKPYTFIVLAIFICIIGPMAALRTPTDVFPDIGIPVVAVVWQYNGLSPDAMAGRVIYTYERSLSTTVNDIEHIESQSLPGMGIVKIFFQPGVDIRTANAQVTAVSQTVLKQMPPGITPPLILNYSASTVPILQMAFSSPTLSEAKIRDLVQNNIRLPLSALPGLAMPTPMGGKQRQITLDLDPQALAAKGLSAQDVGTALALQNQIIPVGTAKLGTDEYTILLNNSPKAIDELNNLPIKTVDGALITIGQVAHVRDGSPPQTNIVRVDGHRAVLMPALKNGSISTLSIIDGIRQMLPRIDETLPPSLKTSLLGDASVFVKQSVGSVAQEGIIAALLTSAMILLFLGSWRSTLIIAVSIPLAVLSAIALLAVTGQTLNVMTLGGLALAVGILVDDATVTIENINWHLEQGKAVKAAILDGAAQIVGPAFVSLLCICIVFVPMFLLQGIAGYLFRPMALAVIFAMASSFILSRTLVPTLAMFLLKPHTPEQGAGHHPEDEFINHHEGEQHQKPRNVALQAVLNFQQGFERHFSNIRDTYHGLLTLALGNRKRFIVGFLACVLASFLLLPSLGQDFFPATDEGALALHVRLPLGTRIEESAAAFDRIEARIREIIPAEELDTVVDNIGIPLSGIDMAYSSSGTIGPQDGDIQVTLKKHHAPTADYVKKLREALPQSFPGSHFAFLPADISSQILNFGAPAPLDVKISGRNDAENRAYALELERRLQHVPGIADLRIQQSTGYPSLQVNVDRLRANGLGITERDVTNSMVASLAGSSQIAPTFWLNPANGVSYSIVAATPQYRLDSLPSLEALPVTGASGQSQILGGVASISRVQSPAVVTHYNIEPTLDLYANVQGRDLGGVARDVQKVLDDTASMRPKGATISLHGQIDALHEAFSGLSFGLLGAVVLIYLLTVVNFQSWVDPFVIITALPAALAGIVWMLFLSGTSLSVPALTGAILCMGVATANSILVVSFCRERLAEHGDALKAALEAGYTRFRPVCMTALAMIIGMLPLALSEEQNAPLGRAVIGGLILATTATLLFVPVVFSLVHGRHPTRATAGETPHVV
>NZ_CP054205.1|WP_167417727.1|3834074_3834485_-|hypothetical-protein
MSLKPFLLIPALSAVLLLSACAGPMPKADPSEAWIGLKEEAPNDLLAERVDGKRVDDGRFFEVTPGDHRLDVTLFEDEPGDDNQQDCQGRVHYKHFKAGEHYTLVESSLGMTVRATLKDAQGHEVATAQDFNCMPG
>NZ_CP054205.1|WP_167389900.1|3833925_3834078_+|hypothetical-protein
MSLATTIFLLICGWLAVAGAMLWGVLRITRRHHHPHVKPAKPHKAVVRHA
>NZ_CP054205.1|WP_052198982.1|3833075_3833738_-|peptidase-C39-family-protein
MRLRSNLPTSLLLAFTLGLTACAGHPSKLAGLPERVELNGVPTFRSEVYQSGPAALASMLSQQGIVMTPGLLDKPLHLPGGEANLERTMPQLAREYGLMVYPLEAKLTAVLAQVAAGYPVMARLGGGLWSDARYVVVVGFNQQKSTVLLRSGMDRRLLMSFSDFESKWASAGHWAILTQRPSQLPANVDAQRWREAADATAQAGQERAAAQALKVLADHR
>NZ_CP054205.1|WP_034114272.1|3832103_3833027_+|D-alanyl-D-alanine-endopeptidase
MKIRLSIISLFFAFTGTIAHAAETALAPRDPSKLQIASGSAMLVDLQTNKVIYASNPDVVVPIASVSKLMTGLIVLEAKQNMDEYIDINITDTPEMKGVFSRVKIGSEMPRKEMLLIALMSSENRAAASLAHHYPGGYSAFIAAMNAKAKALGMTSTHYVEPTGLSIHNVSTARDLSKLLAAARKYPMLSQLSTTKEKTVAFRKPNYTLGFSNTDHLINRANWDIKLTKTGFTNQAGHCLVLVTSMGNRPVSLVILDAFGKYTHFADASRIRSWVETGKGGAVPDVALRYKADKNLKNRANAAEVRR
>NZ_CP054205.1|WP_034098858.1|3831041_3831896_+|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MTAQLIDGKSIAASLRQQIAKRVAERSQQGLRTPGLAVILVGSDPASQVYVSHKRKDCEEVGFISKAYDLPAQTTQQALTDLIDSLNEDPTIDGVLLQLPLPDHLDASKLLERIRPDKDVDGFHPYNVGRLAQRIPLLRPCTPKGIMTLLESTGVDLYGLDAVVVGASNIVGRPMAMELLLAGCTVTVTHRFTKDLAGHVGRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQEDGKLVGDVVYDTALPRAGWITPVPGGVGPMTRACLLENTLYAAETLHD
>NZ_CP054205.1|WP_034138643.1|3828649_3829960_-|trigger-factor
MQVSVENTTALERRLSITVPAERIETAVNKRLQQTAQKAKIAGFRPGKVPMSEIKRRFGADARQEAVGDVIQASFYEAVVEQKLNPAGSPSIEPKSLEAGKDLEYVAVFEVFPEFEVAGFEGIAIERLSAEVADSDLDNMLEILRKQNTRFEVVERAAQNEDQLNIDFVGKVDGEVFAGGSAKGTQLVLGSNRMIPGFEDGLVGAKAGEERVLNLTFPADYQNLDLAGKTAEFTVTVNSVSEPKLPELNEEFFAQFGIKETGIEGFRAEVRKNMERELRQAIKSKVKNQVMDGLLAANPIEVPKALLSNEVDRLRVQAVQQFGGNIKPDQLPAELFEEQAKRRVVLGLIVAEVVKQFDLKPDEDRVREMIQEMASAYQEPEQVVAWYYKNDQQLNEVRSVVLEEQVVDTVLQKAKVTDKAVSYEEAVKPAEAAQAD
>NZ_CP054205.1|WP_034098854.1|3827922_3828558_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MFRNSYIQQNSDIQAAGGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEMAREYGLIDAVIDHRPA
>NZ_CP054205.1|WP_034098871.1|3841268_3841727_+|transposase
MADLPASHRLRIGRFSEPGRIYLITTNTHERVPIFSHFHLGRLVVWQFRLAQYQGLANSLAWVIMPDHFHWLLELKKGSLADLMCQVKSKSTRTVNGLSGRKGRLWQESFHDRALRKDDDLVKMARYVVANPLRAGLVERIGDYPLWDAIWV
>NZ_CP054205.1|WP_167417908.1|3841788_3843072_-|allantoate-amidohydrolase
MNAALDVLQSAHPHINRDRLWQSLMDLAKLGATPKGGVCRLALTDLDRKARDLFVQWCEEAGCTVSVDGIGNIFARRPGRNPDLPPVMTGSHIDTQPTGGKFDGCFGVLAGVEVLRTLNDLKIETEAPLEVVVWTNEEGSRFPPCMMGSGVFAEKFTLADTLAKVDAEGVSVGEALNAIGYAGTRPESGHKVGAYFEAHIEQGPILEDEKKTIGVVLGALGQKWFDLKLRGVEAHAGPTPMHLRKDALVGAAAVVAAVNAAALGHQPHACGTVGCLQAYPGSRNVIPGEVRMTLDFRHLEPARLDSMIAQVRQVIEDTCAKHGLSFEMEPTADFPPLYFDKGCVEAVRNAANGLGLSNMDIVSGAGHDAIFVAELGPAGMIFVPCEGGISHNEIENAAPDDLAAGCAVLLRAMLAASAAIASGKLAA
>NZ_CP054205.1|WP_167417909.1|3843096_3844584_-|cytosine-permease
MQQNRSQVIERNGLYELDAGPDVLDSPRYNHDMAPTKVHERTWNKWHITALWVGMSICVPTYTLGGVLTAYFGLSVGEALIAILLANIVVLLPLTLNAFPGTKYGIPFPVLLRSSFGILGSNVPCLIRALVACGWFGIQTMFGGLAIHLFLGSIFEGWKALGGTGEVIGFMMFWTLNLWVVLRGAESIKRLETLSAPLLVAVGIGLLVWAMPNVSISELMAIPPKRPEGASLTGYFMAGLTAMVGFWATLSLNIPDFSRYAKSQKDQILGQIFGLPLTMFLFAALGVIMTAASVKLVGVSVSDPVTLIGHIQSPVWVAIAMALIIIATLSTNTAANIVSPTNDFQNIAPKLINRTTAVILTGLVGLALMAHELLKKLGLIVSDVSLETVYSNWLLGYSSLLGPIAGIMVVDYFITRKQQLDLAGLYRDDVYPAWNWSGFIAFGVPVVLTLLALGSDAFSWFYSYGWFTGSALGGLLYYGLNAKRGASPVVIKVNS
>NZ_CP054205.1|WP_167417910.1|3845175_3846615_+|dihydropyrimidinase
MSLLIRGATVITHDESYRADVLCAGGLIRAIGSNLDVPAGTEVLDGSGQYLMPGGIDPHTHMQLPFMGTVASEDFFSGTAAGLAGGTTSIIDFVIPNPQQSLLEAFHQWRGWAEKSAADYGFHVAITWWSEQVREEMAELVSHHGINSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVYHLQRKLMAQGITGPEAHPLSRPSQVEGEAASRAIRIAETIGTPLYLVHVSTREALDEITYARGKGQPVYGEVLAGHLLLDDSVYQHPDWHTAAGYVMSPPFRPRGHQEALWHGLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMALLWDEGVNTGRLSMQEFVALTSTNTAKIFNLYPRKGAIRVGADADLVLWDPQGTRTISAKTHHQQVDFNIFEGKTVRGVPSHTISQGKLVWADGDLRAERGAGRYVERPAYPAVFEQLSKRAEHSRPIAVKR
>NZ_CP054205.1|WP_167417911.1|3846762_3848130_+|FAD-dependent-oxidoreductase
MIQTLTHLPHPVEDGATLASHFTDLAPPLNARQAHLEASRCLYCYDAPCVNACPSEIDIPSFIRNIHTDNVQGAAQKILSANILGGSCARVCPTEILCQQACVRNNAEECAPVLIGLLQRYALDNAHFSEHPFQRAAPSGKRIAVVGAGPAGLACAHRSAMHGHDVVIFEAREKAGGLNEYGIAKYKLVDDFAQKELDFLLQIGGIEIRHGQRLGANLTLSELHQQFDAVFLGLGLAASKQLGLPHEDAPGLLAATDYIRELRQAQDLTQLPVADRCIVLGAGNTAIDMAVQMARLGARDVNLVYRRGLADMGATGHEQDIAKANQVRLLTWAMPEEVLLDDQGRVRGMRFARTQMHDGRLQPTGETFELAADAIFKAIGQGFDGDALHDPLAQQLHRVGGRIFVDEHLRTSIPGVYAGGDCVSLGQDLTVQAVQHGKLAAEAMHAQLMLNVEAA
>NZ_CP054205.1|WP_034098881.1|3848129_3849404_+|NAD-dependent-dihydropyrimidine-dehydrogenase-subunit-PreA
MADLSIVFAGIKAPNPFWLASAPPTDKAYNVVRAFEAGWGGVVWKTLGEDPAAVNVSSRYSAHFGANREVLGINNIELITDRSLEINLREITQVKKDWPDRALIVSLMVPCVEASWKNILPLVEATGCDGIELNFGCPHGMPERGMGAAVGQVPEYVEQVTRWCKTYCSLPVIVKLTPNITDIRVAARAAYRGGADAVSLINTINSITSVDLEHMVALPTVGTQSTHGGYCGSAVKPIALNMVAEIARDPQTQGLPICGIGGIGTWRDAAEFVALGCGAVQVCTAAMLHGFRIVEEMKDGLSRWMDSQGYTSLQDFSGRAVGNTTDWKYLDINYQVIAKIDQAACIGCGRCHIACEDTSHQAIASLKQADGTHKYEVIDDECVGCNLCQITCPVADCIEMVPIDTGKPFLNWTQDPRNPYREAV
>NZ_CP054205.1|WP_034138650.1|3849524_3850145_-|TetR/AcrR-family-transcriptional-regulator
MGNHKSGIRRANVEKILLAAEKIFAEKGYGSTAMADIAEEAQLPRSNLHYYFTTKSELYSAVLFDLLDVWKQDALSFETFDDPRVVLSSYIRAKMQRSRTRPYGSKVWANEIIHGAPTLGEALDESLYDWAKMKEAKIRQWVEDKRILPVEPSSLLYMIWASTQHYADFDHQVTILNDHQPLSDRQFEKAIQTVTSVILRGIGLEP
>NZ_CP054205.1|WP_034098885.1|3850261_3850627_+|copper-homeostasis-periplasmic-binding-protein-CopC
MLIKKALTAVALLASLLGASAAFAHAHLKSASPAEDSTVTAPKDLRLTFSEGVEATFSKVSLSKDGTEVAIKGLETPDANKKILVVTPAAPLAAGTYTVEWHAVSVDTHKSEGTYRFKVGQ
>NZ_CP054205.1|WP_167417912.1|3850630_3851488_+|copper-homeostasis-membrane-protein-CopD
MATLLVLCRFVHFMVVLLMFGACAFRPWLLGKDTQPALERTLLRLTRGLAWTALVSGVAWLLLITASMAGSWDAALQPGTVGLVLGKTFFGQVWVWHLLLNLLLVIALIKPWPALRLPLLALLLATLAPVGHGAMLDGLNGRLLILNQVVHLLCVGAWLGGLLLLVLILRQAQRHRLEPILRRFSGVGYGLVAGLLVSGLINVRVLTGQLWPTPLFSGFALILLIKVMLVLGMLCLALLNRLRLDSGEQQLAGLKGSVMLEWLLGVCAVAAVSVLGTLPPMVLAG
>NZ_CP054205.1|WP_167417913.1|3851812_3853075_+|outer-membrane-porin,-OprD-family
MSQFARNSCVRLGLVGLGSLSITLPFAAHADGFVDDAKATLNLRNAYFNRNFTNPGNAQGKAEEWTQSFILDAKSGYTQGTLGFGIDVLGLYSQKLDGGKGTGGTQLLPIHDDGRPADNFGRLGVALKTKLSKTELKVGEWMPVLPILRSDDGRSLPQTFRGGQITSNEIAGLTLYGGQFRGNSPRNDASMEDMFMNGKTAFKSDRFNFGGGEYTFNDKRTQVGLWYAELSDIYQQQYVNLIHSQPLGDWTLGANLGFFNGKEDGSALAGDLDNKTAFALLSAKYGGNTFYVGLQKLSGDSVWMRVNGTSGGTLANDSYNSSYDNAKEKSWQLRHDFNFAVLGVPGLTLMNRYISGSNVHTGTITDGKEWGRESELAYTVQSGALKNLNVKWRNSTMRRDFSTNEFDENRIFISYPISLL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1484966 : 1560786

Pseudomonas_phage(21.43%)

lysis,holin,tRNA,tail,plate

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034096128.1\|1484966_1485437_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_034137171.1\|1485493_1486603_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.6e-23	31.4
WP_034111959.1\|1486599_1487520_-	ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	2.1e-18	27.7
WP_173603377.1\|1487952_1490061_+	molybdopterin oxidoreductase family protein	NA	NA	NA	NA
WP_034096132.1\|1490147_1490486_+	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_034096133.1\|1490554_1491025_-	bacterioferritin	NA	NA	NA	NA
WP_034096134.1\|1491226_1491445_-	bacterioferritin-associated ferredoxin	NA	NA	NA	NA
WP_034096135.1\|1491687_1492290_+	peroxiredoxin	NA	NA	NA	NA
WP_010564138.1\|1492354_1493026_-	ribonuclease T	NA	NA	NA	NA
WP_034137174.1\|1493022_1494069_-	dihydroorotase	NA	NA	NA	NA
WP_034137175.1\|1494225_1495134_+	OmpA family protein	NA	NA	NA	NA
WP_034096138.1\|1495263_1496481_+	argininosuccinate synthase	NA	NA	NA	NA
WP_034096139.1\|1497098_1497731_+	response regulator transcription factor	NA	NA	NA	NA
WP_034096140.1\|1497815_1497998_-	hypothetical protein	NA	NA	NA	NA
WP_034096141.1\|1498105_1498744_-	endonuclease III	NA	NA	NA	NA
WP_167416394.1\|1498908_1499871_-	electron transport complex subunit RsxB	NA	NA	NA	NA
WP_034137178.1\|1499988_1502040_-\|tRNA	methionine--tRNA ligase	NA	NA	NA	NA
WP_167416395.1\|1502211_1503306_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_034111970.1\|1503742_1504066_-	ferredoxin family protein	NA	NA	NA	NA
WP_167416396.1\|1504208_1506800_-	DNA mismatch repair protein MutS	A0A1V0SJ67	Klosneuvirus	1.1e-27	22.3
WP_080761400.1\|1507020_1507755_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	5.7e-120	88.1
WP_034096148.1\|1508352_1508697_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	7.4e-46	81.0
WP_167416397.1\|1508718_1509234_+	hypothetical protein	NA	NA	NA	NA
WP_167416398.1\|1509237_1509849_+\|plate	phage baseplate assembly protein V	A0A2H4JBW8	uncultured_Caudovirales_phage	3.3e-44	52.0
WP_167416399.1\|1509858_1510191_+\|plate	phage baseplate protein	A0A2H4JI46	uncultured_Caudovirales_phage	2.3e-36	68.2
WP_167416400.1\|1510187_1511183_+\|plate	baseplate J/gp47 family protein	A0A2H4JC04	uncultured_Caudovirales_phage	1.1e-110	63.2
WP_167416401.1\|1511179_1511818_+\|tail	phage tail protein I	A0A2H4JDK0	uncultured_Caudovirales_phage	5.8e-36	50.0
WP_034137185.1\|1511814_1512345_+\|tail	tail fiber protein	A2I2X8	Vibrio_virus	1.8e-46	60.6
WP_167416402.1\|1512435_1513053_+	hypothetical protein	NA	NA	NA	NA
WP_034096777.1\|1513107_1513314_+	hypothetical protein	A0A1L5C071	Aquamicrobium_phage	5.9e-06	49.2
WP_167389876.1\|1513396_1513570_+	hypothetical protein	NA	NA	NA	NA
WP_167416403.1\|1513572_1514739_+\|tail	phage tail protein	B0ZSG8	Halomonas_phage	1.2e-124	57.5
WP_034137187.1\|1514738_1515245_+\|tail	phage major tail tube protein	Q6R4W3	Vibrio_virus	4.9e-22	34.5
WP_167416404.1\|1515295_1515868_+\|tail	phage tail assembly protein	B0ZSH0	Halomonas_phage	2.8e-29	39.6
WP_167416405.1\|1515996_1517241_+	hypothetical protein	NA	NA	NA	NA
WP_094064795.1\|1517240_1517624_+\|tail	phage tail protein	A0A2H4JAC8	uncultured_Caudovirales_phage	3.3e-34	55.1
WP_167416406.1\|1517616_1517829_+\|tail	tail protein X	A0A2H4JGD9	uncultured_Caudovirales_phage	3.6e-19	62.9
WP_167416407.1\|1517838_1518849_+	phage late control D family protein	B0ZSH3	Halomonas_phage	3.2e-97	52.7
WP_167416408.1\|1518871_1519429_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	1.2e-74	72.7
WP_167416409.1\|1519416_1519929_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	3.9e-35	54.4
WP_034096165.1\|1520010_1520511_+	CinA family protein	B5TK85	Pseudomonas_phage	1.5e-71	84.3
WP_034096166.1\|1520594_1521653_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	4.1e-111	62.4
WP_167416410.1\|1521661_1522129_+	recombination regulator RecX	NA	NA	NA	NA
WP_034137195.1\|1522245_1523358_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA
WP_034096169.1\|1523734_1524169_-	hypothetical protein	NA	NA	NA	NA
WP_167416411.1\|1524347_1525067_+	DTW domain-containing protein	NA	NA	NA	NA
WP_034137197.1\|1525307_1525958_+	response regulator transcription factor	NA	NA	NA	NA
WP_034096172.1\|1526033_1526396_+	diacylglycerol kinase	NA	NA	NA	NA
WP_034137198.1\|1526399_1527326_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_034096174.1\|1527450_1528230_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_034096175.1\|1528289_1528985_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_034096176.1\|1528988_1529450_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.0e-37	51.3
WP_034096177.1\|1529517_1530228_-	RNA-binding protein S4	NA	NA	NA	NA
WP_034137202.1\|1530299_1530773_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_034096179.1\|1530874_1532215_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_034137203.1\|1532503_1534405_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	2.7e-73	33.1
WP_040267444.1\|1534530_1535637_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA
WP_034096182.1\|1535905_1536091_+	hypothetical protein	NA	NA	NA	NA
WP_040267445.1\|1536135_1537761_-	glucan biosynthesis protein D	NA	NA	NA	NA
WP_167416412.1\|1538117_1539980_-	NAD(P)-binding protein	NA	NA	NA	NA
WP_094064784.1\|1540046_1541471_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_034096186.1\|1541580_1542390_-	ABC transporter permease	NA	NA	NA	NA
WP_034096187.1\|1542379_1543312_-	ABC transporter permease	NA	NA	NA	NA
WP_099312733.1\|1543313_1544348_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.8e-26	36.0
WP_034112087.1\|1544547_1545699_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_034137209.1\|1545770_1547228_-	gamma-aminobutyraldehyde dehydrogenase	NA	NA	NA	NA
WP_034096190.1\|1547360_1548272_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_167416413.1\|1548439_1549147_+	DUF533 domain-containing protein	NA	NA	NA	NA
WP_034096192.1\|1549359_1550982_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_167416414.1\|1550981_1551494_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_034096194.1\|1551490_1552744_+	chemotaxis protein CheR	NA	NA	NA	NA
WP_167416415.1\|1552740_1553442_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_167416416.1\|1553438_1555718_+	response regulator	Q56AR1	Bacillus_thuringiensis_phage	3.3e-09	28.0
WP_167416417.1\|1555714_1556725_+	chemotaxis-specific protein-glutamate methyltransferase CheB	NA	NA	NA	NA
WP_034096198.1\|1556776_1557778_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.1e-16	35.2
WP_098100956.1\|1558104_1559199_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.0e-07	46.6
WP_034112093.1\|1559283_1560786_+\|tRNA	lysine--tRNA ligase	A0A2K9KZX5	Tupanvirus	9.4e-85	39.6

DBSCAN-SWA_2

1634037 : 1638996

uncultured_Mediterranean_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167416442.1\|1634037_1634787_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.6e-64	51.4
WP_169867554.1\|1634828_1635464_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	52.3
WP_167416443.1\|1635671_1636514_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	8.3e-06	33.3
WP_034096265.1\|1636618_1637623_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.3e-34	36.2
WP_002554837.1\|1637830_1638040_-	cold-shock protein	Q9AZD3	Lactococcus_phage	2.2e-16	66.7
WP_094064740.1\|1638429_1638996_+	dCTP deaminase	S5VM63	Pseudomonas_phage	3.7e-74	72.7

DBSCAN-SWA_3

1897891 : 1940691

uncultured_Caudovirales_phage(58.97%)

portal,holin,tRNA,terminase,protease,lysis,head,plate,tail,integrase,capsid

attL 1897755:1897779|attR 1942704:1942728

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1897755:1897779	attL	NA	NA	NA	NA
WP_034096500.1\|1897891_1898818_-	transaldolase	A0A127KNC6	Cyanophage	4.1e-14	34.8
WP_173603386.1\|1899094_1900114_-\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
WP_173603387.1\|1900216_1901302_+\|integrase	site-specific integrase	L7TP61	Pseudomonas_virus	2.1e-150	71.2
WP_173603388.1\|1901411_1902569_+	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	5.8e-58	38.2
WP_173603389.1\|1902570_1903242_+	hypothetical protein	NA	NA	NA	NA
WP_173603390.1\|1903186_1904251_-	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	2.3e-101	55.4
WP_173603391.1\|1904401_1904671_-	pyocin activator PrtN family protein	A0A2K8HN48	Pseudomonas_phage	4.6e-19	58.8
WP_173603392.1\|1904667_1904952_-	hypothetical protein	NA	NA	NA	NA
WP_173603393.1\|1904948_1905491_-	phosphohydrolase	U5P0T3	Shigella_phage	7.9e-26	41.4
WP_173603394.1\|1905487_1905709_-	hypothetical protein	NA	NA	NA	NA
WP_173603395.1\|1905705_1906107_-	hypothetical protein	NA	NA	NA	NA
WP_173603396.1\|1906156_1906483_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_173603397.1\|1906433_1906613_-	hypothetical protein	NA	NA	NA	NA
WP_169903532.1\|1906638_1906923_-	phage antirepressor KilAC domain-containing protein	NA	NA	NA	NA
WP_173603398.1\|1906932_1907514_-	hypothetical protein	NA	NA	NA	NA
WP_173603399.1\|1907873_1908887_+	DUF2806 domain-containing protein	NA	NA	NA	NA
WP_173603400.1\|1908887_1909613_-	peptidase S24	A5VW98	Enterobacteria_phage	1.1e-30	39.3
WP_173603401.1\|1909691_1909952_+	hypothetical protein	A0A0D4DBS7	Acinetobacter_phage	2.5e-09	44.9
WP_173603402.1\|1910280_1910799_+	hypothetical protein	NA	NA	NA	NA
WP_093126267.1\|1910791_1911019_+	TraR/DksA family transcriptional regulator	A0A2I7S9S9	Vibrio_phage	5.8e-07	49.1
WP_173603578.1\|1911008_1913228_+	conjugal transfer protein TraC	A0A2D1GN57	Marinobacter_phage	4.0e-193	47.9
WP_173603403.1\|1913220_1913586_+	hypothetical protein	NA	NA	NA	NA
WP_093527474.1\|1914113_1914458_+\|holin	pyocin R2, holin	A0A2H4J893	uncultured_Caudovirales_phage	1.1e-44	79.6
WP_173603404.1\|1914664_1915261_+\|terminase	terminase small subunit	A0A2H4JG15	uncultured_Caudovirales_phage	2.9e-53	61.3
WP_173603405.1\|1915264_1917289_+\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	80.7
WP_069023714.1\|1917290_1917497_+	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	9.0e-23	76.5
WP_173603406.1\|1917496_1918978_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	1.2e-246	86.0
WP_173603407.1\|1918974_1920117_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	9.5e-138	68.5
WP_069077637.1\|1920113_1920452_+\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	3.3e-46	86.2
WP_173603408.1\|1920514_1921510_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	9.7e-171	88.8
WP_173603409.1\|1921512_1921833_+	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	3.3e-40	73.3
WP_173603410.1\|1921829_1922486_+	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	7.7e-76	65.2
WP_173603411.1\|1922478_1923012_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	2.8e-60	63.3
WP_173603412.1\|1923011_1923587_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.2e-53	75.0
WP_173603340.1\|1923644_1923875_+	hypothetical protein	NA	NA	NA	NA
WP_173603413.1\|1923880_1924207_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.3e-36	66.7
WP_173603414.1\|1924203_1925085_+\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	5.8e-119	74.7
WP_173603415.1\|1925086_1925692_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	1.1e-79	71.2
WP_173603416.1\|1927394_1927868_+\|tail	tail fiber assembly protein	Q9ZXK5	Pseudomonas_virus	1.5e-17	47.1
WP_173603417.1\|1927957_1929130_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	1.8e-179	79.7
WP_173603418.1\|1929143_1929647_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	3.1e-56	62.3
WP_173603419.1\|1929661_1930273_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	4.1e-15	41.2
WP_173603420.1\|1930413_1932897_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	4.5e-07	47.9
WP_173603421.1\|1932906_1933752_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	8.4e-99	63.6
WP_173603422.1\|1933726_1933933_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.3e-16	61.2
WP_173603423.1\|1934001_1934319_+	hypothetical protein	NA	NA	NA	NA
WP_173603424.1\|1934389_1935433_+	late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.8e-147	77.9
WP_173603425.1\|1935496_1936060_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	4.7e-82	78.6
WP_173603426.1\|1936041_1936584_+\|lysis	lysis protein	B5TK84	Pseudomonas_phage	3.1e-46	57.9
WP_173603427.1\|1936638_1936974_-	hypothetical protein	NA	NA	NA	NA
WP_173603428.1\|1937228_1938023_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	3.4e-102	66.5
WP_173603429.1\|1938147_1938897_-	SOS response-associated peptidase family protein	A0A2H4J991	uncultured_Caudovirales_phage	2.5e-62	53.9
WP_044286813.1\|1938998_1939424_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A1W6JNS2	Morganella_phage	1.1e-14	38.7
WP_173603430.1\|1939416_1940691_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	2.1e-109	50.8
1942704:1942728	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2014171 : 2023802

Synechococcus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_094064529.1\|2014171_2015128_+	GDP-mannose 4,6-dehydratase	M4QRT5	Synechococcus_phage	1.4e-62	42.6
WP_078047517.1\|2015156_2016281_+	GDP-mannose 4,6-dehydratase	M1IBD7	Acanthocystis_turfacea_Chlorella_virus	2.7e-137	67.2
WP_167416563.1\|2016284_2017259_+	NAD-dependent epimerase/dehydratase family protein	R9S8B8	Prochlorococcus_phage	1.5e-91	53.0
WP_167416564.1\|2017562_2018978_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	2.1e-49	29.5
WP_094064526.1\|2018982_2019732_+	glycosyltransferase	A0A1V0SAH6	Catovirus	9.3e-09	24.0
WP_167416565.1\|2019728_2020700_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA
WP_173603434.1\|2020718_2021741_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_167416581.1\|2021804_2023802_+	polysaccharide biosynthesis protein	K7Y9E1	Megavirus	4.2e-16	26.2

DBSCAN-SWA_5

2861578 : 2919354

Pseudomonas_phage(56.6%)

lysis,terminase,tail,integrase,capsid

attL 2863138:2863182|attR 2919588:2919632

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080758731.1\|2861578_2863165_-	ABC-F family ATPase	A0A2K9L0W2	Tupanvirus	3.8e-60	29.1
2863138:2863182	attL	NA	NA	NA	NA
WP_173603456.1\|2863185_2864379_-\|integrase	tyrosine-type recombinase/integrase	J7HXC4	Pseudomonas_phage	1.2e-122	58.5
WP_173603457.1\|2864566_2864788_-	hypothetical protein	A0A2H4J1L2	uncultured_Caudovirales_phage	4.1e-13	52.1
WP_173603458.1\|2865333_2865690_-	hypothetical protein	NA	NA	NA	NA
WP_173603459.1\|2865686_2866352_-	hypothetical protein	A0A059VF56	Pseudomonas_phage	1.9e-69	60.3
WP_173603460.1\|2866348_2866678_-	hypothetical protein	A0A1B0VM42	Pseudomonas_phage	6.0e-45	71.6
WP_123479004.1\|2866790_2867444_+	hypothetical protein	NA	NA	NA	NA
WP_173603461.1\|2867506_2868304_-	DNA cytosine methyltransferase	A0A2I7QZY6	Vibrio_phage	3.2e-60	48.1
WP_173603462.1\|2868401_2868611_+	hypothetical protein	NA	NA	NA	NA
WP_173603463.1\|2868917_2869283_+	response regulator	NA	NA	NA	NA
WP_173603464.1\|2869415_2869628_+	hypothetical protein	NA	NA	NA	NA
WP_173603465.1\|2869634_2870267_-	hypothetical protein	NA	NA	NA	NA
WP_173603466.1\|2870372_2870909_+	NYN domain-containing protein	NA	NA	NA	NA
WP_173603467.1\|2870900_2871233_-	hypothetical protein	A0A2H4J0R5	uncultured_Caudovirales_phage	2.7e-16	51.5
WP_034097465.1\|2871302_2871773_-	hypothetical protein	A0A2H4J101	uncultured_Caudovirales_phage	2.6e-73	88.7
WP_173603468.1\|2871769_2872012_-	hypothetical protein	A0A2H4J1H1	uncultured_Caudovirales_phage	6.0e-34	96.2
WP_173603469.1\|2872014_2872677_-	YqaJ viral recombinase family protein	A0A0U2BXF3	Paracoccus_phage	1.7e-30	38.8
WP_034097470.1\|2872676_2873642_-	recombinase RecT	A0A193GYL3	Enterobacter_phage	1.7e-71	57.3
WP_034097471.1\|2873695_2874811_-	hypothetical protein	NA	NA	NA	NA
WP_034097474.1\|2874913_2875141_-	hypothetical protein	NA	NA	NA	NA
WP_034097476.1\|2875130_2875367_-	hypothetical protein	NA	NA	NA	NA
WP_034097478.1\|2875344_2875611_-	hypothetical protein	A0A2H4J404	uncultured_Caudovirales_phage	1.6e-24	74.7
WP_173603470.1\|2876358_2876610_-	DUF1654 domain-containing protein	NA	NA	NA	NA
WP_173603471.1\|2876777_2877332_-	hypothetical protein	NA	NA	NA	NA
WP_173603472.1\|2877403_2877619_-	hypothetical protein	A0A2D1GNR5	Pseudomonas_phage	2.7e-22	73.2
WP_123479013.1\|2877825_2879451_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-59	41.8
WP_173603473.1\|2879744_2880071_-	DUF2388 domain-containing protein	NA	NA	NA	NA
WP_173603474.1\|2880320_2881436_-	hypothetical protein	NA	NA	NA	NA
WP_173603475.1\|2881572_2881809_-	hypothetical protein	NA	NA	NA	NA
WP_173603476.1\|2881888_2882107_-	hypothetical protein	NA	NA	NA	NA
WP_173603477.1\|2882535_2883192_-	helix-turn-helix domain-containing protein	K7PM82	Enterobacteria_phage	8.6e-43	49.7
WP_058415369.1\|2883301_2883481_+	Cro/Cl family transcriptional regulator	R9TPV3	Vibrio_phage	2.5e-05	49.0
WP_173603478.1\|2883531_2884152_+	hypothetical protein	NA	NA	NA	NA
WP_173603479.1\|2884221_2885016_+	Rha family transcriptional regulator	A0A2I7RX10	Vibrio_phage	4.2e-52	48.6
WP_173603480.1\|2885012_2885927_+	helix-turn-helix domain-containing protein	A0A1B0VME0	Pseudomonas_phage	3.1e-46	64.9
WP_173603481.1\|2885913_2886711_+	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	4.2e-92	66.9
WP_173603482.1\|2886707_2887178_+	hypothetical protein	A0A2H4J106	uncultured_Caudovirales_phage	2.8e-51	60.3
WP_173603483.1\|2887174_2887507_+	hypothetical protein	NA	NA	NA	NA
WP_173603484.1\|2887503_2888109_+	recombination protein NinG	A0A0U1VZM0	Pseudomonas_phage	1.8e-71	65.5
WP_173603485.1\|2888105_2888792_+	hypothetical protein	NA	NA	NA	NA
WP_173603486.1\|2889046_2889559_+	acyloxyacyl hydrolase	A0A2H4J0I5	uncultured_Caudovirales_phage	1.4e-69	72.6
WP_167418423.1\|2889774_2890110_+	MFS transporter	A0A088FVG2	Escherichia_phage	2.0e-19	47.3
WP_167418422.1\|2890106_2890451_+	hypothetical protein	A0A193GYR7	Enterobacter_phage	8.0e-08	37.8
WP_040267822.1\|2890460_2890826_-	hypothetical protein	NA	NA	NA	NA
WP_169903603.1\|2890941_2891274_-	hypothetical protein	NA	NA	NA	NA
WP_173603487.1\|2891349_2891964_+	hypothetical protein	A0A1B0VRJ1	Pseudomonas_phage	5.5e-108	91.8
WP_017479621.1\|2891995_2892457_+	DUF2280 domain-containing protein	A0A0S2SY97	Pseudomonas_phage	1.2e-43	69.1
WP_173603488.1\|2892443_2893745_+\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	4.0e-148	59.9
WP_173603489.1\|2893741_2895160_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	1.3e-258	91.5
WP_173603490.1\|2895134_2896220_+\|capsid	minor capsid protein	A0A1B0VMF3	Pseudomonas_phage	1.0e-186	93.4
WP_173603491.1\|2896302_2897031_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	9.7e-120	92.6
WP_173603492.1\|2897043_2898006_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	7.6e-173	96.6
WP_173603493.1\|2898031_2898502_+	CTP synthase	A0A1B0VMF7	Pseudomonas_phage	2.1e-14	58.6
WP_173603581.1\|2898501_2899005_+	hypothetical protein	A0A1B0VND3	Pseudomonas_phage	6.1e-81	91.6
WP_173603494.1\|2899022_2899394_+	hypothetical protein	A0A1B0VRJ4	Pseudomonas_phage	3.1e-58	91.1
WP_173603495.1\|2899390_2899987_+	hypothetical protein	A0A1B0VMI1	Pseudomonas_phage	4.1e-52	53.2
WP_173603496.1\|2899983_2900403_+	DUF4128 domain-containing protein	A0A1B0VMI0	Pseudomonas_phage	2.6e-61	85.4
WP_056785418.1\|2900471_2901143_+\|tail	phage tail protein	A0A0H5BBY3	Pseudomonas_phage	1.9e-45	43.7
WP_173603497.1\|2901145_2901526_+\|tail	phage tail assembly chaperone	A0A1B0VMH4	Pseudomonas_phage	4.7e-25	50.4
WP_173603498.1\|2901603_2901846_+	DUF1799 domain-containing protein	A0A2H4J4F7	uncultured_Caudovirales_phage	3.8e-20	57.3
WP_173603499.1\|2901873_2904930_+\|tail	phage tail tape measure protein	A0A1B0VMG8	Pseudomonas_phage	9.5e-177	39.6
WP_173603500.1\|2904929_2905268_+\|tail	phage tail protein	A0A1B0VMG7	Pseudomonas_phage	3.0e-55	85.7
WP_173603501.1\|2905279_2906032_+\|tail	phage minor tail protein L	A0A1B0VNE0	Pseudomonas_phage	1.5e-139	93.2
WP_173603502.1\|2906034_2906796_+	C40 family peptidase	A0A1B0VP68	Pseudomonas_phage	3.9e-140	89.6
WP_173603503.1\|2906813_2907311_-	hypothetical protein	NA	NA	NA	NA
WP_173603504.1\|2907459_2907810_+	hypothetical protein	NA	NA	NA	NA
WP_173603505.1\|2907869_2908481_+\|tail	tail assembly protein	A0A1B0VMI5	Pseudomonas_phage	3.7e-80	77.3
WP_173603506.1\|2908525_2908975_+	hypothetical protein	NA	NA	NA	NA
WP_173603507.1\|2909027_2912714_+\|tail	phage tail protein	A0A1B0VMH5	Pseudomonas_phage	0.0e+00	87.4
WP_167418703.1\|2912715_2913021_+	hypothetical protein	NA	NA	NA	NA
WP_173603508.1\|2913950_2914841_+	hypothetical protein	A0A1B0VMK1	Pseudomonas_phage	1.6e-20	32.7
WP_173603509.1\|2914837_2915224_+	hypothetical protein	A0A2D1GNF5	Pseudomonas_phage	2.0e-39	68.2
WP_167418482.1\|2915472_2916006_+	glycoside hydrolase family 19 protein	A0A059VA40	Pseudomonas_phage	9.1e-75	79.1
WP_123479053.1\|2916002_2916521_+\|lysis	lysis protein	A0A2H4IZW4	uncultured_Caudovirales_phage	2.6e-58	75.4
WP_123479054.1\|2916588_2917383_+	DNA adenine methylase	C7BGE1	Burkholderia_phage	4.2e-100	66.0
WP_173603510.1\|2917379_2918060_-	SOS response-associated peptidase family protein	A0A2H4J991	uncultured_Caudovirales_phage	3.1e-120	88.4
WP_123479056.1\|2918143_2918353_+	hypothetical protein	A0A2H4J2T0	uncultured_Caudovirales_phage	1.5e-17	60.9
WP_173603511.1\|2918331_2919057_-	hypothetical protein	NA	NA	NA	NA
WP_034097568.1\|2919144_2919354_-	hypothetical protein	A0A2D1GNR5	Pseudomonas_phage	8.0e-11	55.4
2919588:2919632	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2997481 : 3035810

uncultured_Caudovirales_phage(100.0%)

protease,plate,integrase

attL 3003923:3003939|attR 3038639:3038655

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_167417212.1\|2997481_2998828_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_167417211.1\|2998865_3000215_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_167417210.1\|3000211_3001234_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_167417209.1\|3001197_3002964_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_167417208.1\|3002971_3003385_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_167417226.1\|3003385_3004858_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
3003923:3003939	attL	NA	NA	NA	NA
WP_167417207.1\|3004895_3005399_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_167417206.1\|3005731_3006337_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_167417205.1\|3006324_3007761_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_167417204.1\|3007770_3011412_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_167417203.1\|3011461_3012784_+	hypothetical protein	NA	NA	NA	NA
WP_094065647.1\|3012967_3013645_+	VWA domain-containing protein	NA	NA	NA	NA
WP_167417202.1\|3013589_3014393_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA
WP_173603583.1\|3015781_3016570_+	topoisomerase DNA-binding C4 zinc finger domain-containing protein	NA	NA	NA	NA
WP_167417201.1\|3016824_3018060_-\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A2H4J5F8	uncultured_Caudovirales_phage	2.7e-29	26.9
WP_034138133.1\|3019393_3020416_+	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_167417200.1\|3021123_3022548_+	hypothetical protein	NA	NA	NA	NA
WP_123479761.1\|3022544_3023951_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_094065663.1\|3024049_3025693_+	alpha-D-glucose phosphate-specific phosphoglucomutase	NA	NA	NA	NA
WP_167417199.1\|3025816_3026512_-	pirin family protein	NA	NA	NA	NA
WP_167417198.1\|3026731_3029179_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA
WP_034097780.1\|3029224_3029497_-	DUF1652 domain-containing protein	NA	NA	NA	NA
WP_094065666.1\|3029754_3030564_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_167417197.1\|3030613_3032020_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_040268299.1\|3032046_3032388_+	cupin domain-containing protein	NA	NA	NA	NA
WP_094065668.1\|3032448_3033528_+	polyamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_034138123.1\|3033955_3035389_+	M10 family metallopeptidase	NA	NA	NA	NA
WP_167417196.1\|3035438_3035810_+\|protease	AprI/Inh family metalloprotease inhibitor	NA	NA	NA	NA
3038639:3038655	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3674827 : 3681012

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034098644.1\|3674827_3675220_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.5e-55	82.3
WP_034098646.1\|3675221_3675572_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	3.6e-40	69.2
WP_034114172.1\|3675571_3675850_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.4e-23	57.6
WP_034114174.1\|3675846_3676182_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	7.2e-46	77.5
WP_167417861.1\|3676178_3677180_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	5.9e-168	85.4
WP_167417862.1\|3677268_3678264_+	glutathione S-transferase C-terminal domain-containing protein	NA	NA	NA	NA
WP_034098656.1\|3678336_3679731_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_034098658.1\|3679731_3681012_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.6e-96	53.8

DBSCAN-SWA_8

5452552 : 5511725

Tupanvirus(16.67%)

holin,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034101138.1\|5452552_5453053_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_034139590.1\|5453193_5454072_+	acyltransferase	NA	NA	NA	NA
WP_123479312.1\|5454113_5454350_-	hypothetical protein	NA	NA	NA	NA
WP_167417650.1\|5454529_5455102_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_034139593.1\|5455237_5455696_+	anti-sigma factor	NA	NA	NA	NA
WP_017530750.1\|5455830_5457030_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.9e-11	29.3
WP_167417651.1\|5457151_5458009_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_024077781.1\|5458019_5458652_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_034101146.1\|5458775_5461793_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_003194855.1\|5461789_5462092_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_010207084.1\|5462107_5463358_-	sarcosine oxidase subunit beta	NA	NA	NA	NA
WP_034101149.1\|5463380_5464634_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	6.6e-100	52.5
WP_094064245.1\|5464787_5465516_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_034115309.1\|5465606_5466647_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_034139597.1\|5466831_5467032_+	hypothetical protein	NA	NA	NA	NA
WP_167417652.1\|5467358_5467550_+	hypothetical protein	NA	NA	NA	NA
WP_034139598.1\|5467648_5468749_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_034101156.1\|5469030_5470326_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_123479309.1\|5471129_5471624_+	type II secretion system protein	NA	NA	NA	NA
WP_034139601.1\|5471598_5471979_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_173603567.1\|5471965_5472472_+	type II secretion system protein	NA	NA	NA	NA
WP_167417653.1\|5472546_5474094_+	lytic polysaccharide monooxygenase	K9RY18	Philosamia_cynthia_ricini_nucleopolyhedrovirus	5.6e-16	28.5
WP_034139603.1\|5474273_5474705_+	type II secretion system major pseudopilin GspG	NA	NA	NA	NA
WP_034139604.1\|5474711_5475176_+	transglycosylase SLT domain-containing protein	NA	NA	NA	NA
WP_167417654.1\|5475172_5476357_+	type II secretion system F family protein	NA	NA	NA	NA
WP_123479306.1\|5476361_5477999_+	type II/IV secretion system protein	NA	NA	NA	NA
WP_167417661.1\|5478003_5478705_+	hypothetical protein	NA	NA	NA	NA
WP_167417656.1\|5478701_5479256_+	hypothetical protein	NA	NA	NA	NA
WP_094064255.1\|5479262_5479799_+	hypothetical protein	NA	NA	NA	NA
WP_167417657.1\|5479795_5480287_+	hypothetical protein	NA	NA	NA	NA
WP_167417658.1\|5480305_5482222_+	general secretion pathway protein GspD	NA	NA	NA	NA
WP_034139613.1\|5483117_5483888_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_167417807.1\|5483898_5485119_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_167417808.1\|5485118_5487062_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_167417809.1\|5487218_5489279_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_034101179.1\|5489295_5489826_-	hydrocarbon-binding protein	NA	NA	NA	NA
WP_015373138.1\|5489904_5490882_-	membrane dipeptidase	NA	NA	NA	NA
WP_034101181.1\|5491101_5491503_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_094064259.1\|5491544_5491961_+	DUF3010 family protein	NA	NA	NA	NA
WP_034139619.1\|5492085_5493264_-	hypothetical protein	NA	NA	NA	NA
WP_167417810.1\|5493331_5494276_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_034101185.1\|5494469_5495414_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_034115323.1\|5495489_5496377_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_034139621.1\|5496534_5497500_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_034101189.1\|5497513_5497990_+	thioesterase family protein	NA	NA	NA	NA
WP_034101191.1\|5498243_5498507_+	hypothetical protein	NA	NA	NA	NA
WP_034139622.1\|5498602_5499706_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_034101194.1\|5500424_5501801_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_094064264.1\|5502218_5503166_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_016972877.1\|5503235_5504081_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_034101196.1\|5504077_5505256_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.5e-26	37.6
WP_167417811.1\|5505409_5507401_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	26.8
WP_034101198.1\|5507731_5508325_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_167417812.1\|5508434_5509907_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_167417813.1\|5510021_5511725_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	5.9e-51	29.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP054205

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection