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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP054212 Erwiniaceae bacterium PD-1 chromosome, complete genome 4 crisprs cas3f,cas8f,cas5f,cas7f,cas6f,DEDDh,WYL,DinG,cas3 9 19 7 1
NZ_CP054213 Erwiniaceae bacterium PD-1 plasmid pPD-1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP054212
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054212_1 937850-939020 TypeI-F I-F
19 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054212_2 2011647-2011855 Orphan I-F
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054212_3 2013049-2013376 Orphan I-F
5 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054212_4 2014165-2014431 Orphan I-F
4 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP054212_1 1.1|937878|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 937878-937909 32 NZ_CP054212.1 2554073-2554104 0 1.0
NZ_CP054212_1 1.2|937938|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 937938-937969 32 NZ_CP054212.1 2545367-2545398 0 1.0
NZ_CP054212_1 1.3|937998|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 937998-938029 32 NZ_CP054212.1 2522326-2522357 0 1.0
NZ_CP054212_1 1.6|938178|33|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938178-938210 33 NZ_CP054212.1 3245164-3245196 0 1.0
NZ_CP054212_1 1.17|938840|33|NZ_CP054212|CRISPRCasFinder,CRT 938840-938872 33 NZ_CP054212.1 3561657-3561689 0 1.0
NZ_CP054212_2 2.1|2011676|31|NZ_CP054212|PILER-CR 2011676-2011706 31 NZ_CP054212.1 2543485-2543515 0 1.0
NZ_CP054212_2 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT 2011675-2011706 32 NZ_CP054212.1 2543484-2543515 0 1.0
NZ_CP054212_4 4.1|2014193|31|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014193-2014223 31 NZ_CP054212.1 2555994-2556024 0 1.0
NZ_CP054212_4 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014252-2014283 32 NZ_CP054212.1 2538250-2538281 0 1.0

1. spacer 1.1|937878|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 2554073-2554104, mismatch: 0, identity: 1.0

ttgctcgtcagccgtgtcatgtaacttaatct	CRISPR spacer
ttgctcgtcagccgtgtcatgtaacttaatct	Protospacer
********************************

2. spacer 1.2|937938|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 2545367-2545398, mismatch: 0, identity: 1.0

ttatccgttatttcctcgccgccggggctatt	CRISPR spacer
ttatccgttatttcctcgccgccggggctatt	Protospacer
********************************

3. spacer 1.3|937998|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 2522326-2522357, mismatch: 0, identity: 1.0

gcgtacgcgtaccggaagagaaggaataatcc	CRISPR spacer
gcgtacgcgtaccggaagagaaggaataatcc	Protospacer
********************************

4. spacer 1.6|938178|33|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 3245164-3245196, mismatch: 0, identity: 1.0

ctacagtcgcgcatacgatgatgtcgcgcctga	CRISPR spacer
ctacagtcgcgcatacgatgatgtcgcgcctga	Protospacer
*********************************

5. spacer 1.17|938840|33|NZ_CP054212|CRISPRCasFinder,CRT matches to position: 3561657-3561689, mismatch: 0, identity: 1.0

ccgctgggcgcatctaacctgattggtcgcgaa	CRISPR spacer
ccgctgggcgcatctaacctgattggtcgcgaa	Protospacer
*********************************

6. spacer 2.1|2011676|31|NZ_CP054212|PILER-CR matches to position: 2543485-2543515, mismatch: 0, identity: 1.0

cggcggcggaatatcaggaaacgctggataa	CRISPR spacer
cggcggcggaatatcaggaaacgctggataa	Protospacer
*******************************

7. spacer 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT matches to position: 2543484-2543515, mismatch: 0, identity: 1.0

gcggcggcggaatatcaggaaacgctggataa	CRISPR spacer
gcggcggcggaatatcaggaaacgctggataa	Protospacer
********************************

8. spacer 4.1|2014193|31|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 2555994-2556024, mismatch: 0, identity: 1.0

atgctgcccgcgcatgaaccacgttggtgca	CRISPR spacer
atgctgcccgcgcatgaaccacgttggtgca	Protospacer
*******************************

9. spacer 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to position: 2538250-2538281, mismatch: 0, identity: 1.0

ttatagcttgcctcgccgatggttcccttctc	CRISPR spacer
ttatagcttgcctcgccgatggttcccttctc	Protospacer
********************************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NZ_CP019281 Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence 29020-29051 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 LR595868 Escherichia virus mEp460_4F5 genome assembly, chromosome: 1 32126-32157 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 AP012536 Stx2-converting phage Stx2a_1447 proviral DNA, complete genome 7479-7510 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 JQ182728 Enterobacteria phage mEp460, complete genome 33041-33072 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 KF030445 Escherichia phage 1720a-02, complete genome 38448-38479 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 MF807953 Escherichia phage Ayreon, complete genome 34466-34497 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NC_003444 Enterobacteria phage SfV, complete genome 27187-27218 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NC_049941 Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome 7479-7510 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 U82619 Shigella flexneri bacteriophage V, complete genome 27187-27218 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NC_009514 Phage cdtI DNA, complete genome 36061-36092 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 LR595862 Escherichia virus Lambda_2H10 genome assembly, chromosome: 1 34727-34758 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 MT225100 Escherichia phage Lys8385Vzw, complete genome 34180-34211 3 0.906
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 CP044351 Escherichia coli strain 194195 plasmid p194195_1, complete sequence 104799-104830 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NC_004313 Salmonella phage ST64B, complete genome 29594-29625 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 KU927493 Salmonella phage 118970_sal3, complete genome 27617-27648 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 KU927493 Salmonella phage 118970_sal3, complete genome 67205-67236 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 NC_021857 Shigella phage SfII, complete genome 30238-30269 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 KC814930 Shigella phage SfIV, complete genome 30039-30070 4 0.875
NZ_CP054212_2 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT 2011795-2011826 32 AY055382 Salmonella typhimurium phage ST64B complete sequence 29594-29625 4 0.875
NZ_CP054212_1 1.11|938479|32|NZ_CP054212|CRISPRCasFinder,CRT 938479-938510 32 MN693691 Marine virus AFVG_250M1053, complete genome 6274-6305 6 0.812
NZ_CP054212_1 1.14|938659|32|NZ_CP054212|CRISPRCasFinder,CRT 938659-938690 32 MH431935 Paenibacillus phage Honeybear, complete genome 23676-23707 6 0.812
NZ_CP054212_1 1.14|938659|32|NZ_CP054212|CRISPRCasFinder,CRT 938659-938690 32 NC_048690 Paenibacillus phage Pagassa, complete genome 23654-23685 6 0.812
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP022369 Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence 270980-271011 7 0.781
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP010860 Marinovum algicola DG 898 plasmid pMaD5, complete sequence 111995-112026 7 0.781
NZ_CP054212_2 2.1|2011676|31|NZ_CP054212|PILER-CR 2011676-2011706 31 NZ_CP010957 Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence 290834-290864 7 0.774
NZ_CP054212_2 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT 2011675-2011706 32 NZ_CP010957 Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence 290834-290865 7 0.781
NZ_CP054212_3 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT 2013316-2013347 32 MH910041 Arthrobacter phage Seahorse, complete genome 29484-29515 7 0.781
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 1018747-1018778 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1323641-1323672 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 1836363-1836394 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NC_011892 Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence 207869-207900 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NC_011887 Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence 132192-132223 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 KX641262 Mycobacterium phage Nazo, complete genome 19505-19536 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 MN304816 Phage 67_12, partial genome 33735-33766 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP032325 Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence 14771-14802 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP007796 Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence 676206-676237 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP032349 Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence 305091-305122 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP050090 Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence 31858-31889 8 0.75
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 KF626665 Phage Sano, complete genome 865-896 8 0.75
NZ_CP054212_1 1.5|938118|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938118-938149 32 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 158982-159013 8 0.75
NZ_CP054212_1 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT 938539-938570 32 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 976521-976552 8 0.75
NZ_CP054212_1 1.13|938599|32|NZ_CP054212|CRISPRCasFinder,CRT 938599-938630 32 NZ_CP050082 Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence 110265-110296 8 0.75
NZ_CP054212_1 1.18|938901|32|NZ_CP054212|CRISPRCasFinder,CRT 938901-938932 32 NC_019362 Sulfitobacter guttiformis plasmid pSG53, complete sequence 9013-9044 8 0.75
NZ_CP054212_3 3.1|2013077|31|NZ_CP054212|CRISPRCasFinder,CRT 2013077-2013107 31 NZ_CP041094 Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed2, complete sequence 16178-16208 8 0.742
NZ_CP054212_4 4.1|2014193|31|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014193-2014223 31 NZ_CP011920 Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence 167535-167565 8 0.742
NZ_CP054212_4 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014252-2014283 32 NZ_CP017750 Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence 56145-56176 8 0.75
NZ_CP054212_4 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014252-2014283 32 NZ_CP046332 Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2 83318-83349 8 0.75
NZ_CP054212_4 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014252-2014283 32 NZ_CP026545 Cupriavidus metallidurans strain Ni-2 plasmid unnamed1 29962-29993 8 0.75
NZ_CP054212_4 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 2014252-2014283 32 NC_006466 Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence 105672-105703 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_CP053606 Escherichia coli strain NEB_Turbo plasmid F', complete sequence 192707-192738 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_CP053608 Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence 203201-203232 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_AP023209 Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence 20702-20733 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_CP014271 Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence 194035-194066 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_CP014273 Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence 174990-175021 8 0.75
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NC_021909 Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence 29951-29982 8 0.75
NZ_CP054212_1 1.1|937878|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 937878-937909 32 NZ_CP021355 Rhodococcus sp. S2-17 plasmid pRB98, complete sequence 17774-17805 9 0.719
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP032346 Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence 1612910-1612941 9 0.719
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP032340 Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence 784209-784240 9 0.719
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP012915 Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence 1348174-1348205 9 0.719
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP054841 Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence 34944-34975 9 0.719
NZ_CP054212_1 1.10|938419|32|NZ_CP054212|CRISPRCasFinder,CRT 938419-938450 32 NZ_CP038637 Cupriavidus oxalaticus strain X32 plasmid unnamed2, complete sequence 133319-133350 9 0.719
NZ_CP054212_2 2.1|2011676|31|NZ_CP054212|PILER-CR 2011676-2011706 31 NZ_AP022559 Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence 9222-9252 9 0.71
NZ_CP054212_2 2.2|2011736|31|NZ_CP054212|PILER-CR 2011736-2011766 31 MH649005 Inoviridae sp. isolate ctcf138, complete genome 1080-1110 9 0.71
NZ_CP054212_3 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT 2013316-2013347 32 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 235025-235056 9 0.719
NZ_CP054212_4 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT 2014372-2014403 32 NZ_CP025188 Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence 87097-87128 9 0.719
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP042998 Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence 98904-98935 10 0.688
NZ_CP054212_1 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT 938058-938089 32 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 384376-384407 10 0.688
NZ_CP054212_1 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT 938539-938570 32 NZ_CP021360 Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence 35600-35631 10 0.688
NZ_CP054212_1 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT 938539-938570 32 NZ_CP021367 Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence 42547-42578 10 0.688
NZ_CP054212_1 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT 938539-938570 32 NZ_CP021363 Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence 28598-28629 10 0.688
NZ_CP054212_2 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT 2011675-2011706 32 NZ_AP022559 Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence 9222-9253 10 0.688
NZ_CP054212_2 2.4|2011735|32|NZ_CP054212|CRISPRCasFinder,CRT 2011735-2011766 32 MH649005 Inoviridae sp. isolate ctcf138, complete genome 1079-1110 10 0.688
NZ_CP054212_3 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT 2013316-2013347 32 NZ_CP025431 Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence 255687-255718 10 0.688
NZ_CP054212_3 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT 2013316-2013347 32 NZ_CP043499 Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence 1647661-1647692 11 0.656

1. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP019281 (Escherichia coli strain 13P484A plasmid p13P484A-1, complete sequence) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

2. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to LR595868 (Escherichia virus mEp460_4F5 genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtc	Protospacer
********************.*********  

3. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to AP012536 (Stx2-converting phage Stx2a_1447 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

4. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to JQ182728 (Enterobacteria phage mEp460, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

5. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to KF030445 (Escherichia phage 1720a-02, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

6. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MF807953 (Escherichia phage Ayreon, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

7. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_003444 (Enterobacteria phage SfV, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

8. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_049941 (Stx2-converting phage Stx2a_WGPS2 proviral DNA, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

9. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to U82619 (Shigella flexneri bacteriophage V, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

10. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_009514 (Phage cdtI DNA, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

11. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to LR595862 (Escherichia virus Lambda_2H10 genome assembly, chromosome: 1) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtt	Protospacer
********************.*********  

12. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MT225100 (Escherichia phage Lys8385Vzw, complete genome) position: , mismatch: 3, identity: 0.906

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgtcgtggcgtc	Protospacer
********************.*********  

13. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtg	Protospacer
********************.*.******* .

14. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_004313 (Salmonella phage ST64B, complete genome) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtc	Protospacer
********************.*.*******  

15. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtc	Protospacer
********************.*.*******  

16. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to KU927493 (Salmonella phage 118970_sal3, complete genome) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtc	Protospacer
********************.*.*******  

17. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_021857 (Shigella phage SfII, complete genome) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtg	Protospacer
********************.*.******* .

18. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to KC814930 (Shigella phage SfIV, complete genome) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtg	Protospacer
********************.*.******* .

19. spacer 2.5|2011795|32|NZ_CP054212|CRISPRCasFinder,CRT matches to AY055382 (Salmonella typhimurium phage ST64B complete sequence) position: , mismatch: 4, identity: 0.875

cgcgagtgtgcagctccgggtgtcgtggcgaa	CRISPR spacer
cgcgagtgtgcagctccgggcgccgtggcgtc	Protospacer
********************.*.*******  

20. spacer 1.11|938479|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MN693691 (Marine virus AFVG_250M1053, complete genome) position: , mismatch: 6, identity: 0.812

aggttatagcgcttctgttcatcc---atcagatc	CRISPR spacer
aggttatagtgcttcagttcatccagtattag---	Protospacer
*********.***** ********   **.**   

21. spacer 1.14|938659|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MH431935 (Paenibacillus phage Honeybear, complete genome) position: , mismatch: 6, identity: 0.812

ttaagggacatgcgagagttagac--aagccaag	CRISPR spacer
ttaagggacattcgagagttagattgcagcga--	Protospacer
*********** ***********.   *** *  

22. spacer 1.14|938659|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_048690 (Paenibacillus phage Pagassa, complete genome) position: , mismatch: 6, identity: 0.812

ttaagggacatgcgagagttagac--aagccaag	CRISPR spacer
ttaagggacattcgagagttagattgcagcga--	Protospacer
*********** ***********.   *** *  

23. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022369 (Azospirillum sp. TSH58 plasmid TSH58_p05, complete sequence) position: , mismatch: 7, identity: 0.781

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
cagatggacgcccaggcggcgcggagtctggc	Protospacer
** ** ******************* *.. *.

24. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010860 (Marinovum algicola DG 898 plasmid pMaD5, complete sequence) position: , mismatch: 7, identity: 0.781

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
ccgatcgacgcccaggcggcgctgatcgccgg	Protospacer
*  ******************* ***. *.* 

25. spacer 2.1|2011676|31|NZ_CP054212|PILER-CR matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 7, identity: 0.774

cggcggcggaatatcaggaaacgctggataa	CRISPR spacer
ccaaggcggaatttctggaaacgctggaaag	Protospacer
* . ******** ** ************ *.

26. spacer 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP010957 (Sphingobium sp. YBL2 plasmid 3pYBL2-3, complete sequence) position: , mismatch: 7, identity: 0.781

gcggcggcggaatatcaggaaacgctggataa	CRISPR spacer
gccaaggcggaatttctggaaacgctggaaag	Protospacer
** . ******** ** ************ *.

27. spacer 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MH910041 (Arthrobacter phage Seahorse, complete genome) position: , mismatch: 7, identity: 0.781

cggcgac--gatcgaggccagcgaattcttgcaa	CRISPR spacer
--gccacaagatcgagggcagcgaattcgtgctc	Protospacer
  ** **  ******** ********** ***  

28. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
accatcgacgcacaggcggcgcggatcggcgc	Protospacer
  ********* **************.  .*.

29. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
accatcgacgcgcaggcggcgcggatcggcgc	Protospacer
  ********* **************.  .*.

30. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
accatcgacgcgcaggcggcgcggatcggcgc	Protospacer
  ********* **************.  .*.

31. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NC_011892 (Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
ttcatcgacgcccaggccgcgcggaagtcgcg	Protospacer
. *************** *******  **   

32. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
ttcatcgacgcccaggccgcgcggaagtcgcg	Protospacer
. *************** *******  **   

33. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to KX641262 (Mycobacterium phage Nazo, complete genome) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
tacatcgacgtccaggcggcgccgaactcgaa	Protospacer
.*********.*********** ** .** . 

34. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to MN304816 (Phage 67_12, partial genome) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
ggcatcgacgcgccggcggcgcggatggcagc	Protospacer
 .********* * ************  * *.

35. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032325 (Azospirillum brasilense strain MTCC4035 plasmid p4, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
cagatggacgcccaggcggcgcgcagtctggc	Protospacer
** ** ***************** * *.. *.

36. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007796 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p3, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
cagatggacgcccaggcggcgcgcagtctggc	Protospacer
** ** ***************** * *.. *.

37. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032349 (Azospirillum brasilense strain MTCC4039 plasmid p3, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
cagatggacgcccaggcggcgcgcagtctggc	Protospacer
** ** ***************** * *.. *.

38. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050090 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b4, complete sequence) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
gtcgtcgacgcccagccggggcggattgttgc	Protospacer
  *.*********** *** ******* .**.

39. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to KF626665 (Phage Sano, complete genome) position: , mismatch: 8, identity: 0.75

cacatcgacgcccaggcggcgcggatttctgt-----	CRISPR spacer
caccttgacgcccaggcggcgcg-----cggtgagcg	Protospacer
*** *.*****************     * **     

40. spacer 1.5|938118|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.75

aacgggctctccgaagggctgtcg-taacctct	CRISPR spacer
gacgtgctctccgacgggctgtcgatggtcta-	Protospacer
.*** ********* ********* *...**  

41. spacer 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.75

ctgttcagaaatgccatggccgataccgtggc	CRISPR spacer
cagaggagacgtgccatggccgataccgtgat	Protospacer
* *   *** .*******************..

42. spacer 1.13|938599|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP050082 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b4, complete sequence) position: , mismatch: 8, identity: 0.75

---agattttgtgggcggtgggattctctatcacg	CRISPR spacer
tcgagg---tgtgggaggtgggattatctatctca	Protospacer
   **.   ****** ********* ****** *.

43. spacer 1.18|938901|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_019362 (Sulfitobacter guttiformis plasmid pSG53, complete sequence) position: , mismatch: 8, identity: 0.75

gacgagggtgacagcattgtgctgaagcgcgg	CRISPR spacer
cgcgatggtgacagctttgtgctgaacggtga	Protospacer
 .*** ********* **********  *.*.

44. spacer 3.1|2013077|31|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP041094 (Klebsiella pneumoniae subsp. pneumoniae strain KPCTRSRTH01 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

agcgggtgatctgcgatttgtccacccaacc	CRISPR spacer
caccggtgatctgcgttttgtccaccgcaaa	Protospacer
 .* *********** **********  *  

45. spacer 4.1|2014193|31|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011920 (Burkholderia cenocepacia strain ST32 plasmid pBCEN1232, complete sequence) position: , mismatch: 8, identity: 0.742

atgctgcccgcgcatgaaccacgttggtgca	CRISPR spacer
ccgctccccgcgcatgaaccccgtttgctga	Protospacer
 .*** ************** **** *.  *

46. spacer 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttatagcttgcctcgccgatggttcccttctc	CRISPR spacer
ctgcagcttgcctcggcgatcgttccccgcgc	Protospacer
.*..*********** **** ******. * *

47. spacer 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046332 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

ttatagcttgcctcgccgatggttcccttctc	CRISPR spacer
ctgcagcttgcctcggcgatcgttccccgcgc	Protospacer
.*..*********** **** ******. * *

48. spacer 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026545 (Cupriavidus metallidurans strain Ni-2 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

ttatagcttgcctcgccgatggttcccttctc	CRISPR spacer
ctgcagcttgcctcggcgatcgttccccgcgc	Protospacer
.*..*********** **** ******. * *

49. spacer 4.2|2014252|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NC_006466 (Cupriavidus metallidurans CH34 plasmid pMOL30, complete sequence) position: , mismatch: 8, identity: 0.75

ttatagcttgcctcgccgatggttcccttctc	CRISPR spacer
ctgcagcttgcctcggcgatcgttccccgcgc	Protospacer
.*..*********** **** ******. * *

50. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
atgcaggtggtgcaggcgctggataacattgc	Protospacer
...* *  ** *************.*******

51. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
atgcaggtggtgcaggcgctggataacattgc	Protospacer
...* *  ** *************.*******

52. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
atgcaggtggtgcaggcgctggataacattgc	Protospacer
...* *  ** *************.*******

53. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
atgcaggtggtgcaggcgctggataacattgc	Protospacer
...* *  ** *************.*******

54. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
atgcaggtggtgcaggcgctggataacattgc	Protospacer
...* *  ** *************.*******

55. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NC_021909 (Rhizobium etli bv. mimosae str. Mim1 plasmid pRetMIM1e, complete sequence) position: , mismatch: 8, identity: 0.75

gcactgtgggagcaggcgctggatg----acattgc	CRISPR spacer
gaactgtggaagcaggcgcaggatgcagaacg----	Protospacer
* *******.********* *****    **.    

56. spacer 1.1|937878|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021355 (Rhodococcus sp. S2-17 plasmid pRB98, complete sequence) position: , mismatch: 9, identity: 0.719

ttgctcgtcagccgtgtcatgtaacttaatct	CRISPR spacer
gatgtcgtcagccgtgtcctgcaacttgaaca	Protospacer
    ************** **.*****.* * 

57. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
acgatcgacgcgcaggcggcgcggatcggcgc	Protospacer
   ******** **************.  .*.

58. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.719

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
accatcgatgcgcaggcggcgcggatcggcgc	Protospacer
  ******.** **************.  .*.

59. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 9, identity: 0.719

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
accatcgatgcgcaggcggcgcggatcggcgc	Protospacer
  ******.** **************.  .*.

60. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054841 (Acidovorax sp. 16-35-5 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
aacatcgatgtccaggcggcgcggcgcgctca	Protospacer
 *******.*.*************  . **  

61. spacer 1.10|938419|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP038637 (Cupriavidus oxalaticus strain X32 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

agactgactttgcggaatttctggaaaaccac	CRISPR spacer
acgctgactatgccgaatttctggaacctgat	Protospacer
* .****** *** ************  . *.

62. spacer 2.1|2011676|31|NZ_CP054212|PILER-CR matches to NZ_AP022559 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence) position: , mismatch: 9, identity: 0.71

cggcggcggaatatcaggaaacgctggataa	CRISPR spacer
ttgcggcgaaatatcaggaagcgctcaaagt	Protospacer
. ******.***********.**** .* . 

63. spacer 2.2|2011736|31|NZ_CP054212|PILER-CR matches to MH649005 (Inoviridae sp. isolate ctcf138, complete genome) position: , mismatch: 9, identity: 0.71

agatagaaatatccctggttgatataaaatg	CRISPR spacer
tcaagtccatatccctagttggtataaaatg	Protospacer
  * .   ********.****.*********

64. spacer 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

cggcgacgatcgaggccagcgaattcttgcaa	CRISPR spacer
cggcgacgatccaggccaccgaaccactggtg	Protospacer
*********** ****** ****.. .**  .

65. spacer 4.4|2014372|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP025188 (Roseomonas mucosa strain AD2 plasmid p1-AD2, complete sequence) position: , mismatch: 9, identity: 0.719

gcactgtgggagcaggcgctggatgacattgc	CRISPR spacer
ccgctttgcgagcaggcgctggatgaggcggg	Protospacer
 *.** ** ***************** .. * 

66. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042998 (Aquisphaera giovannonii strain OJF2 plasmid pOJF2_1, complete sequence) position: , mismatch: 10, identity: 0.688

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
aggatcgacgccgaggcggcgcgcatcatcct	Protospacer
 . ********* ********** **. .. *

67. spacer 1.4|938058|32|NZ_CP054212|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.688

cacatcgacgcccaggcggcgcggatttctgt	CRISPR spacer
gacatcgaggccgaggcggcgcggcagcacgc	Protospacer
 ******* *** ***********   . .*.

68. spacer 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP021360 (Acidovorax carolinensis strain NA2 plasmid pACNA2.1, complete sequence) position: , mismatch: 10, identity: 0.688

ctgttcagaaatgccatggccgataccgtggc	CRISPR spacer
ggcggcgccaacgccatggccgagaccgtggc	Protospacer
     *.  **.*********** ********

69. spacer 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP021367 (Acidovorax carolinensis strain P4 plasmid pACP4.1, complete sequence) position: , mismatch: 10, identity: 0.688

ctgttcagaaatgccatggccgataccgtggc	CRISPR spacer
ggcggcgccaacgccatggccgagaccgtggc	Protospacer
     *.  **.*********** ********

70. spacer 1.12|938539|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP021363 (Acidovorax carolinensis strain P3 plasmid pACP3.1, complete sequence) position: , mismatch: 10, identity: 0.688

ctgttcagaaatgccatggccgataccgtggc	CRISPR spacer
ggcggcgccaacgccatggccgagaccgtggc	Protospacer
     *.  **.*********** ********

71. spacer 2.3|2011675|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_AP022559 (Geobacillus subterraneus strain E55-1 plasmid pGspE55-2, complete sequence) position: , mismatch: 10, identity: 0.688

gcggcggcggaatatcaggaaacgctggataa	CRISPR spacer
tttgcggcgaaatatcaggaagcgctcaaagt	Protospacer
 . ******.***********.**** .* . 

72. spacer 2.4|2011735|32|NZ_CP054212|CRISPRCasFinder,CRT matches to MH649005 (Inoviridae sp. isolate ctcf138, complete genome) position: , mismatch: 10, identity: 0.688

gagatagaaatatccctggttgatataaaatg	CRISPR spacer
ctcaagtccatatccctagttggtataaaatg	Protospacer
   * .   ********.****.*********

73. spacer 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP025431 (Paracoccus zhejiangensis strain J6 plasmid pPZ01, complete sequence) position: , mismatch: 10, identity: 0.688

cggcgacgatcgaggccagcgaattcttgcaa	CRISPR spacer
gcatgaccatcgaggccagcgaattgttctcg	Protospacer
  ..*** ***************** ** . .

74. spacer 3.5|2013316|32|NZ_CP054212|CRISPRCasFinder,CRT matches to NZ_CP043499 (Rhizobium grahamii strain BG7 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.656

cggcgacgatcgaggccagcgaattcttgcaa	CRISPR spacer
atctgacgatcgaggctggcgaattctgcgtg	Protospacer
   .************..*********    .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1107415 : 1112095 6 Shigella_phage(33.33%) transposase NA
DBSCAN-SWA_2 1332104 : 1398138 55 Bodo_saltans_virus(12.5%) tRNA,protease,transposase NA
DBSCAN-SWA_3 1774192 : 1820424 55 Erwinia_phage(64.0%) lysis,protease,plate,holin NA
DBSCAN-SWA_4 2152532 : 2162761 12 Tupanvirus(16.67%) tRNA NA
DBSCAN-SWA_5 2538707 : 2639006 113 Escherichia_phage(13.56%) protease,terminase,tRNA,integrase,portal,bacteriocin,tail attL 2574611:2574639|attR 2635991:2636019
DBSCAN-SWA_6 3255894 : 3286485 56 Escherichia_phage(17.95%) protease,terminase,holin,integrase,lysis attL 3257238:3257252|attR 3290710:3290724
DBSCAN-SWA_7 3405492 : 3414795 9 Bacillus_phage(33.33%) NA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP054212.1|WP_173634312.1|2541870_2542056_-|YoaH-family-protein 2541870_2542056_- 61 aa aa NA NA NA 2538707-2639006 yes