CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP052124	Ralstonia solanacearum strain FJAT1452.F1 chromosome, complete genome	1 crisprs	cas3,WYL,csa3,DEDDh,DinG	0	1	8	0
NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	2 crisprs	WYL	0	3	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP052124_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052124_1

2289494-2289604

Orphan

Consensus_repeat	Method
GCGGACGGCTCGGGACGAATATAGGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP052124_1

>merge|NZ_CP052124|1|2289494-2289604|CRISPRCasFinder
GCGGACGGCTCGGGACGAATATAGGGATGGGAAGCGCTGTTGGCGGCGCGCCCGGACGGGGCGCCCTGCTCCGGCAGCGGAGGCGCGGACGGCTCGGGACGAACATAGGGA

>NZ_CP052124|1|1|2289494-2289604|CRISPRCasFinder
GCGGACGGCTCGGGACGAATATAGGGA	TGGGAAGCGCTGTTGGCGGCGCGCCCGGACGGGGCGCCCTGCTCCGGCAGCGGAGGC
GCGGACGGCTCGGGACGAACATAGGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052124.1\|WP_020831877.1\|2292487_2292994_-\|ribonuclease-E-activity-regulator-RraA	unknown	unknown	gnl\|CDD\|236487
NZ_CP052124.1\|WP_020831887.1\|2285888_2287193_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|237893
NZ_CP052124.1\|WP_064047691.1\|2295667_2296912_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP052124.1\|WP_011001297.1\|2299608_2300592_-\|CysB-family-HTH-type-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237172
NZ_CP052124.1\|WP_011001311.1\|2283158_2283860_-\|haloacid-dehalogenase-type-II	unknown	unknown	gnl\|CDD\|130495
NZ_CP052124.1\|WP_064047690.1\|2296911_2297205_-\|2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|379083
NZ_CP052124.1\|WP_028852994.1\|2294851_2295664_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225818
NZ_CP052124.1\|WP_011001313.1\|2280916_2281387_-\|DUF1857-family-protein	unknown	unknown	gnl\|CDD\|176872
NZ_CP052124.1\|WP_043897909.1\|2281493_2283074_-\|malate-synthase-A	unknown	unknown	gnl\|CDD\|236432
NZ_CP052124.1\|WP_021154818.1\|2278151_2278883_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	unknown	unknown	gnl\|CDD\|274750
NZ_CP052124.1\|WP_016722040.1\|2292081_2292495_-\|gamma-glutamylcyclotransferase	unknown	unknown	gnl\|CDD\|225016
NZ_CP052124.1\|WP_016722033.1\|2279035_2279305_+\|acyl-CoA-binding-protein	unknown	unknown	gnl\|CDD\|226731
NZ_CP052124.1\|WP_011001309.1\|2284316_2285246_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP052124.1\|WP_064047689.1\|2297402_2299460_-\|type-III-effector-protein	unknown	unknown	gnl\|CDD\|339245
NZ_CP052124.1\|WP_011001296.1\|2300626_2301745_-\|sulfate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213263
NZ_CP052124.1\|WP_020831876.1\|2293021_2294767_-\|thiamine-pyrophosphate-binding-protein	unknown	unknown	gnl\|CDD\|181285
NZ_CP052124.1\|WP_011001310.1\|2284070_2284292_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052124.1\|WP_064047693.1\|2279356_2280820_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP052124.1\|WP_020371745.1\|2285322_2285757_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP052124.1\|WP_020831881.1\|2290038_2291904_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275380

Protein	Function_ID	Function_description	E-value
NZ_CP052124.1\|WP_020831877.1\|2292487_2292994_-\|ribonuclease-E-activity-regulator-RraA	gnl\|CDD\|236487	PRK09372, PRK09372, ribonuclease E inhibitor RraA.	5.28194e-95
NZ_CP052124.1\|WP_020831887.1\|2285888_2287193_-\|isocitrate-lyase	gnl\|CDD\|237893	PRK15063, PRK15063, isocitrate lyase; Provisional.	0
NZ_CP052124.1\|WP_064047691.1\|2295667_2296912_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	5.38614e-88
NZ_CP052124.1\|WP_011001297.1\|2299608_2300592_-\|CysB-family-HTH-type-transcriptional-regulator	gnl\|CDD\|237172	PRK12683, PRK12683, transcriptional regulator CysB-like protein; Reviewed.	0
NZ_CP052124.1\|WP_011001311.1\|2283158_2283860_-\|haloacid-dehalogenase-type-II	gnl\|CDD\|130495	TIGR01428, Haloacetate_dehalogenase, 2-haloalkanoic acid dehalogenase, type II. Catalyzes the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids. Belongs to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.	1.61219e-91
NZ_CP052124.1\|WP_021154818.1\|2278151_2278883_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB	gnl\|CDD\|274750	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ. This family describes a protein family, YeaZ, now associated with the threonylcarbamoyl adenosine (t6A) tRNA modification. Members of this family may occur as fusions with ygjD (previously gcp) or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI. [Protein synthesis, tRNA and rRNA base modification].	6.80724e-56
NZ_CP052124.1\|WP_028852994.1\|2294851_2295664_-\|response-regulator-transcription-factor	gnl\|CDD\|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.17607e-64
NZ_CP052124.1\|WP_011001313.1\|2280916_2281387_-\|DUF1857-family-protein	gnl\|CDD\|176872	cd08863, SRPBCC_DUF1857, DUF1857, an uncharacterized ligand-binding domain of the SRPBCC domain superfamily. Uncharacterized family of the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain superfamily. SRPBCC domains have a deep hydrophobic ligand-binding pocket and they bind diverse ligands. SRPBCC domains include the steroidogenic acute regulatory protein (StAR)-related lipid transfer (START) domains of mammalian STARD1-STARD15, the C-terminal catalytic domains of the alpha oxygenase subunit of Rieske-type non-heme iron aromatic ring-hydroxylating oxygenases (RHOs_alpha_C), Class I and II phosphatidylinositol transfer proteins (PITPs), Bet v 1 (the major pollen allergen of white birch, Betula verrucosa), CoxG, CalC, and related proteins. Other members of the superfamily include PYR/PYL/RCAR plant proteins, the aromatase/cyclase (ARO/CYC) domains of proteins such as Streptomyces glaucescens tetracenomycin, and the SRPBCC domains of Streptococcus mutans Smu.440 and related proteins.	2.21381e-54
NZ_CP052124.1\|WP_043897909.1\|2281493_2283074_-\|malate-synthase-A	gnl\|CDD\|236432	PRK09255, PRK09255, malate synthase; Validated.	0
NZ_CP052124.1\|WP_016722040.1\|2292081_2292495_-\|gamma-glutamylcyclotransferase	gnl\|CDD\|225016	COG2105, COG2105, Uncharacterized conserved protein [Function unknown].	8.89773e-29
NZ_CP052124.1\|WP_011001296.1\|2300626_2301745_-\|sulfate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|213263	cd03296, ABC_CysA_sulfate_importer, ATP-binding cassette domain of the sulfate transporter. Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.25082e-167
NZ_CP052124.1\|WP_016722033.1\|2279035_2279305_+\|acyl-CoA-binding-protein	gnl\|CDD\|226731	COG4281, ACB, Acyl-CoA-binding protein [Lipid metabolism].	2.01415e-46
NZ_CP052124.1\|WP_011001309.1\|2284316_2285246_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.22847e-92
NZ_CP052124.1\|WP_064047690.1\|2296911_2297205_-\|2TM-domain-containing-protein	gnl\|CDD\|379083	pfam13239, 2TM, 2TM domain. This short region contains two transmembrane alpha helices that are found associated with a wide range of other domains. This domain may be involved in cell lysis or peptidoglycan turnover.	3.50944e-14
NZ_CP052124.1\|WP_064047689.1\|2297402_2299460_-\|type-III-effector-protein	gnl\|CDD\|339245	pfam14496, NEL, C-terminal novel E3 ligase, LRR-interacting. This NEL or novel E3 ligase domain is found at the C-terminus of bacterial virulence factors. Its sequence is different from those of the eukaryotic HECT and RING-finger E3 ligases, and it subverts the host ubiquitination process. At the N-terminus of the family-members there is a series of LRR repeats, and the NEL domain interacts with the most N-terminal repeat. The key residue for the ligation step is the cysteine, eg found at position 386 in UniProtKB:E7K2H2. The LRR section sequesters this active site until invasion has occurred.	1.13576e-50
NZ_CP052124.1\|WP_020831876.1\|2293021_2294767_-\|thiamine-pyrophosphate-binding-protein	gnl\|CDD\|181285	PRK08199, PRK08199, thiamine pyrophosphate protein; Validated.	0
NZ_CP052124.1\|WP_064047693.1\|2279356_2280820_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.58851e-68
NZ_CP052124.1\|WP_020371745.1\|2285322_2285757_+\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	5.66819e-31
NZ_CP052124.1\|WP_020831881.1\|2290038_2291904_-\|hypothetical-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	1.63521e-33

>NZ_CP052124.1|WP_020831887.1|2285888_2287193_-|isocitrate-lyase
MSRELEVKALQQEWDTNPRWKGIKRGYSAQDVVRLRGSLQIEHTLARRGAEKLWTLMNSEPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANSNGEMYPDQSLYSVDSVPKVVKRINNTFQRADQIQWSEGKDDVDFFAPIVADAEAGFGGVLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTREAVSKLVAARLAADVMGVPTVLIARTDAEAADLLTADVDDNDRPFCTGERTVEGFYRTKPGLQQAIARGLAYADYADLVWCETGKPDLEYAKKFAEAIHAKFPGKMLAYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHALNYSMFNLAHGYARNQMSAFVELQEAEFAAAEKGFTAVKHQREVGTGYFDAVTQTIERDASTTALKGSTEDEQFFEEKAHAKKVA
>NZ_CP052124.1|WP_020371745.1|2285322_2285757_+|universal-stress-protein
MFQHILIPTDGSELSRKAVAGALDFAKTLGARLTAYTCLEEYPYTPFSEIVVETPQAFKERVEAQARVVLKDVEDTARAAGIDCDTDMSCFAVPYMGIIDAAERHGCDVIFMASHGRRGLAGLLLGSETQKVLTHTAIPVIVYR
>NZ_CP052124.1|WP_011001309.1|2284316_2285246_+|LysR-family-transcriptional-regulator
MAHFKQLETFVAVATRGSLSAAAAAEGVAPAIIGRRIDALEERLGVKLLVRTTRRITLTFEGSAFLEDCQRILNDLHNAEASVSAGGVKASGHLRVTAPAGFGRRHVAPMVPDFLAAHPDVSITLDLGDRIVDLVNEGFDCAIRLGDLPDSSLVSIRLWENRRVVVAAPAYLERRGRPEQLEQLAGHNCLAFGASANVQRGWVFQQGGKTVTVKVGGTMECTDGAVLREWCLQGHGLAWRSWWEVGHDIATGRLVTVLDAFEAPPIGIHAVFPQRKHLPLRVRLLIDFLKNTYGNPAYWRRADPTLLTD
>NZ_CP052124.1|WP_011001310.1|2284070_2284292_+|hypothetical-protein
MSLWPQIACVAQRVPAGKIGADGGAAWLAGVAAGALAAWAWLRGRFRLAPAVLEIGVAPWRLRRPSTPAGMPA
>NZ_CP052124.1|WP_011001311.1|2283158_2283860_-|haloacid-dehalogenase-type-II
MTSIRAVVFDAYGTLFDVYSVAARAEQLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLNLPLGNHAEATLMREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQARQSMR
>NZ_CP052124.1|WP_043897909.1|2281493_2283074_-|malate-synthase-A
MELTLPQGMEIKAEILPAYEDILTPEALALVARLHRAFEPRRQQLLAERAERVKRLDAGERPDFLPETRHIREGDWTIAPIPPALECRRVEITGPVEAKMVINAFNSGADSYMTDFEDSNAPSWHNQIQGQVNLKAAIRRTLTLESGGKSYKLNDKIATLQVRPRGWHLDEKHVTVDGQRVSGGIFDFALFLFHNAREQLARGAGPFFYLPKMESHLEARLWNDVFIAAQDALGLPRGTIKATVLIETILAAFEMDEILYELREHSAGLNAGRWDYIFSCIKKFKVDQNFCLADRAKVTMTSPFMRAYALLLLKTCHKRNAPAMGGMSALIPIKNDPEKNAIAMQGIINDKKRDATDGYDGGWVAHPGLVEAAMKEFVDVLGDAPNQIGKQRPDVNVAAADLLNFQPEQPITEAGLRMNINVGIHYLGAWLAGNGCVPIHNLMEDAATAEISRSQVWQWIRSPKGTLEDGTKVTAELVRKLIPEELAKVKADGAVGHFDRAAQIFEQMSTSESFSEFLTLPLYEEL
>NZ_CP052124.1|WP_011001313.1|2280916_2281387_-|DUF1857-family-protein
MRFEHLVEVNDPLNPLMDALTLNQIWQGLVLRVLEPTEFVEGLDEGIITARGEGWVERELRFGKARIQDRVTLEPHQRVTYTTAATGEHAGGSLTMTIETNEANAAFIRFVYDTTLPSADETGDTRYAEIVKSAYREADIDTVRRIREFAAIGRLG
>NZ_CP052124.1|WP_064047693.1|2279356_2280820_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MATFTPTLETLRARHGERFKWLVLFTLTVGAVSSIISATIVNVAIPDLSRHFVLGQERAQWVSASFMVAMTLAMLLTPWLLLRFGLRRTFIGALLLLGVGGLVGGLSPTYGVMIAMRVVGGVAAGIMQPLPNILILRVFPEREQGKAFGLFGFGVVLAPALGPSLGGFLVELFGWRSIFFVVVPFTLLGWAMARRFMAINSSMAGEPKPLDWRGLLLVGAATVALLNGLVELHADVTRGVALMAVSAVCLAMFLFWQRRVESPLLDLRLFSYRQFAMGAVVAFIYGAGLYGSTYLLPVYMQVALAYTPSSAGLVLLPPGLALAATIVVAGRLTSRIEPYRLVSFGLAALAVSFLLMTTNTRATGYLLLIGIAAIGRVGLGFVLPSLSLGAMRGVDFTLIPQGSSAVNFLRQLGGAIGVSATGIFLQWRLAARGIGAVGGVAVDPEARIVACDETFVFLGVLCALAVAAAWRMRRREPAAVVSAGVGP
>NZ_CP052124.1|WP_016722033.1|2279035_2279305_+|acyl-CoA-binding-protein
MSDLQTRFEQAQTDVKSLSERPSNMTLLRLYALFKQGSEGDAHGDKPGFTDIVGRYKYEAWAGLKGLSQDDARQKYIDLVEELKSGATT
>NZ_CP052124.1|WP_021154818.1|2278151_2278883_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-dimerization-subunit-type-1-TsaB
MPWILAFDTSTEFCSVALGDGTRTLFRHEHTGARSSSRVLPAAGELLAEAGIALGDCAAIAFGAGPGSFTGLRTACGVAQGLAFGAGLPVVPVNSLMACAEQTRAALPVGTAVTVALDARMDECYWASFVPVAEDASGWHALSAVQVSAPQAVAPPQQPYWLAGNAAAVFGDRLAAATGAAAVLPDVAPHAREIVTLGLRLLAAGHTVRPEDAAPLYVRDKVALTIEERQAVQQAKAAAGARA
>NZ_CP052124.1|WP_020831881.1|2290038_2291904_-|hypothetical-protein
MVSRIPTGNRGQGNGIEQSASSHATEATPWLGVNLPYGHWLPSSARSVVSRASSLLGGLANFRWGGPSASARPAPNIRSAAIAPAQQTLPPELWQQIATLAGARPRRAMREVSLELRNASRAVVTHLTISDPAMFRQLSLYPALKSVRFKGELTLEALKALPPTLEHLEIGRCTGSAISAEGLAHLASMPLKSLNLNGIEIGVEGARTLATSKSLVSLSLIGCGIGDRAAQALAASRSIRSLDLSVNMIGCDGAQALADAPLVSLNLYSNEIGDDGARALATSQTLTSLELRRNGIGNAGAGAFANNTVLRKLNLANNMIDKRGARVLAGNTSLTELDLGGNRLGDKGARALAGNRSLLSLKVDHNEISDEGVQALAQHATLRSLDLSFNFVGLQGAGALGGNTRLSELNLSLCGINSYSASALARNKSLASLYLNGNRIGDDGARALAKNSTLTLLDLSRNNIQNAGAEALGGNQALISLKLAGNGIDDDGAAALARHPRLTTLDLSQNRIGSEGARHLAQSATLAELDLSENRIGPEGAKALSLSTVLTTLKVIDNVIGEDGARALADSTSLTSLDARRNGIGEAGAKVLEANTRITGTLQNPNFLAEDVPRPDVRWRD
>NZ_CP052124.1|WP_016722040.1|2292081_2292495_-|gamma-glutamylcyclotransferase
MTEAIHVFAYGTLRAGEANDLRVAASRRGIAEPKLIGHATLHGRLYDFGAYPGLVPDPTGTAVRGDVYRIDPGLVPVLDTIEAVYPGGEALFLRETHTVMLGSEPLDCIVYPVSAGQVAGRHVITGGDWVAYRLARG
>NZ_CP052124.1|WP_020831877.1|2292487_2292994_-|ribonuclease-E-activity-regulator-RraA
MTTMMIPVTDLCDAHEDQLASGAVRVLAPVFHSFGARAAFAGPAATLKVFEDNGLVRAMLEQPGEGRVLVVDGGGSLRCALVGGNLAKLAEDNGWEGVLVNGCVRDTRELAACNVGVHALVAHPRKSFKKNQGERDIGVQMPGAYIHPGEWIYGDEDGVLVSRERLHD
>NZ_CP052124.1|WP_020831876.1|2293021_2294767_-|thiamine-pyrophosphate-binding-protein
METAVARPVSTGPTDSTDSGSRPVPRHGGQILVDALIAHGTDLAFGVPGESYLAVLEGFYQRRDRARFIVCRQEGGAATMADAHGKLTGRPGIVFCTRGPGATNASIGVHTAFQDSTPLILFIGQVGRDCVDREAFQEIDYRRMFGQMAKWVAQIDSVERIPEYIARAFQTATAGRPGPVVLALPEDMLTQVATVADVPPMPRAMAWPAPHDLARLKALLGRAERPLLLLGGAGWTPQAAARLQAFAERWRLPVGCVFRRQDLFDNRHPNYAGDVGIAINPKLAARVREADVVLAIGTRLGEMATSGYTLFDVPRPRQTLIHVHAGAEELGRVYQADLMIHAAMPAIAEALDGVAPDAPPRWQAWTEAAHADYLANIAPPPFAGRGIDLARAMQWLRERLPRNAILTNGAGNYATWLHRFYQYGPLAAGSRTQLAPTSGAMGYGAPAAVAAKIACPQTPVICLAGDGCFLMNGQELATAMQYDAPVIFIVVNNGMYGTIRMHQERAYPEHVSGTELRNPDFAALARAYGAEGHTVRSLEGFQAAVEAALAAPVATVIEVQTDPEIISPRATLQSLRAQARG
>NZ_CP052124.1|WP_028852994.1|2294851_2295664_-|response-regulator-transcription-factor
MPIAPRLLIADDEPALADSLIAELAALWPGARIAPAVHDGQSALDAIDRPRAGEAPDVVFLDIRMPGLSGIEVARELAGRAQRPLVVFVTAYDQFALDAFEQAAVDYVLKPVQTERLAATVRRLTARLAERPDGGAAADSAQTLAQLVERLAGLPAAGGANGAYLRFIKALVGQEIRFIPVEEVLYLEATDKYVNVVTHAGASLIRTSLRELLSQLDPQHFWQVHRGTVVNVAHVASAVHLSLGRLALKIRGRTETLPVARQYAHLFRQM
>NZ_CP052124.1|WP_064047691.1|2295667_2296912_-|sensor-histidine-kinase
MRDRPRFDPATPSSKIGRMLANVSLPPLAECLRIAMRWLRAFAWIVAINTGIAAVLAFGIKPDDTFWHDLVYSQAIGLSMWLLIDIPRHLLWGNGSPSRKILPWIVVAAVLIGVPFGQWVARRILCTGDQPWRADSLRMSFIIAMLAALGAMYFYWSRGKLATLQRQAALDALEREEAEKQVVRAQLMALQAQIEPHFLFNALAHVDVLIARDPAGARRLLQHLIGFLRTSLAHARAEQCTLEQEFALLRAYLDIQALRFGARLRFSLALDDTIAGLVVPPMLIQPLVENAVVHGIEPSREGGTIALSARREGDRLRLEVRDTGIGFGRDAAPGKGSGMGLTHVRERLARLFDADARLTIAETMPHGVTVTVELPLAHDAAGADASGAAVPQWRCRFSRPAVAPALAPRAPAGT
>NZ_CP052124.1|WP_064047690.1|2296911_2297205_-|2TM-domain-containing-protein
MSATTFPASDDAALLHRARRRAGARMGLRIHLLAFLAVNLMLAAMALSHGQSWFVWPLLAWGVGLAVHGLGLAWALGSGYRRLVDRELARLRNQAGR
>NZ_CP052124.1|WP_064047689.1|2297402_2299460_-|type-III-effector-protein
MPTRVPSPTLGRSHPVTGAASTATSTAATATRSGPATAPAPGRSREGLLAELPTGRTARTPSVSAAGAHAGRPAWNVQGAIEAMAALSPERETRLFKKSASPQYRYAKGLTAEQRGQLESALEQRFRNPAAPAEARDSALAMWLSVQQARLRTHTAGHRNHHNLEQFQLAALSVPIPLLALGYRRQRRRYYSSPLRPEYRTAFNNFMRVIGDPSLSEAVRQTVAQRLEYHRRSEETIARHERQLLGEHGVMGLAESGYQIGTNYDHVNLTALEREAVVESRGSGVPPALHIQALQTERSRVESGALRHQWLTRELRDAQARAGQGGAVAGSDGPSSVRQVDAAESSAAAARLRRDTANDIRRLRRPLAAEIKQWLKLADMKPLPNPKAFDNELYANAFARLLERRRPLSLISYFARWDPVVVDGAKVIQAVAKDANLRKEVFAAAETALGTCGDNVADGFANIVTMVDTHQLVDDVRSGKLDQPALEAWGRQRYRLDSLITEVNQWMASRRRQAGQHSIMTERRVAREPLETMLHAKVALKTVLDLPKNLPSSMRHRLASALKPDDLKRLAETVQAKEADPVELARYLLSNDAWRGAMKALHPAAFAALGKRFAPEKDALAKEIPPQPTDPEGLEFLDERMAYAERTDAFTQKCRAAEDTLLLSLAGRYALVPAVVGAGPSQGSR
>NZ_CP052124.1|WP_011001297.1|2299608_2300592_-|CysB-family-HTH-type-transcriptional-regulator
MNFQQLRSIREAVRRQFNLTEVANALYTSQPGVSRQIRELEDELGVEIFERYGKRLTGLTEPGREIVRIVERLLLEAENLRQAGEEFSGRQSGRLTVATTHTQARYALPKVVQAFRKAYPHVTLALQEASPSHIVELLLTGQADIGVATEAVASEPGLTSFEAYRWRHVLVVSPDHPLTKNPLPALEDVAQYPLITYDAGFTGRRNIDAAFAGAGLQPEIVLTAMDADVIKTYVALDVGVGIIASMAYDGRKDDNLVCIGADHLFEPNTTRVAVRRGAYLRGYAHDFIGMFAPHLSREAVAEAVASTVVAQPARPALVASPRQTLAA
>NZ_CP052124.1|WP_011001296.1|2300626_2301745_-|sulfate-ABC-transporter-ATP-binding-protein
MSIQVQHVTKRFGNFVALDDVSLAFRQGELTALLGPSGCGKTTLLRIIAGLEHADAGTILLNGEDASDRHVRERQVGFVFQHYALFKHMTVFENVAFGLRVKPRAQRPSEAQIRAKVKALLELVQLDWLAERYPPQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRRLHDDLHVTSLFVTHDQEEALEVADSVVLMNRGQVEQVGSPDAVYNTPATPFVYGFLGNVNLFHGRLEAGEGGSVLHVGETALSVPPGGVDASRADQAVAFVRPHEIDLERYAPGAEGIPVTLRRALTLGAVAQLELERTDSDDIIEVSLPIERFRAQGLREGETLVVRPRAIRVFAQGQGSEHAAAAQAAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP052124_1	1.1\|2289521\|57\|NZ_CP052124\|CRISPRCasFinder	2289521-2289577	57	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1200220-1200276	0	1.0

1. spacer 1.1|2289521|57|NZ_CP052124|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 0, identity: 1.0

tgggaagcgctgttggcggcgcgcccggacggggcgccctgctccggcagcggaggc	CRISPR spacer
tgggaagcgctgttggcggcgcgcccggacggggcgccctgctccggcagcggaggc	Protospacer
*********************************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18096 : 68659

Microbacterium_phage(22.22%)

tail,transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020829879.1\|18096_19098_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_086004752.1\|19232_20035_-\|transposase	IS5-like element IS1421 family transposase	NA	NA	NA	NA
WP_016726789.1\|20112_20592_-	VOC family protein	A0A2K9L4N3	Tupanvirus	2.0e-28	46.7
WP_020830875.1\|20719_21877_-	thiamine phosphate synthase	NA	NA	NA	NA
WP_020830876.1\|21873_22701_-	thiazole synthase	NA	NA	NA	NA
WP_013213874.1\|22710_22938_-	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_043897620.1\|22934_24074_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_172833519.1\|24087_25941_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA
WP_019717362.1\|26400_27585_+	nitronate monooxygenase	NA	NA	NA	NA
WP_020830880.1\|27624_32643_-	autotransporter domain-containing protein	A0A1W6JQC9	Corynebacterium_phage	3.9e-10	52.9
WP_016722569.1\|33146_33695_+\|tail	phage tail protein	NA	NA	NA	NA
WP_016722568.1\|33704_34238_+\|tail	phage tail protein	A0A2R3ZZT3	Microbacterium_phage	2.6e-13	32.7
WP_011000085.1\|34252_34774_+\|tail	phage tail protein	A0A2R4A082	Microbacterium_phage	1.6e-15	36.0
WP_016722567.1\|34848_35151_+	hypothetical protein	NA	NA	NA	NA
WP_011000087.1\|35171_35666_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011000088.1\|35752_37426_+	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA
WP_016722564.1\|37801_38701_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_020830883.1\|38718_40443_-	GMC family oxidoreductase N-terminal domain-containing protein	A0A1V0SI18	Klosneuvirus	5.4e-60	31.9
WP_020830884.1\|40900_41266_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_019719041.1\|41409_42429_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_020830886.1\|43063_43285_-	hypothetical protein	NA	NA	NA	NA
WP_144061914.1\|43511_44903_-	YncE family protein	NA	NA	NA	NA
WP_011000095.1\|45271_45730_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_020830889.1\|45871_46480_+	glutathione S-transferase	NA	NA	NA	NA
WP_011000097.1\|46493_47630_-	HPP family protein	NA	NA	NA	NA
WP_020830890.1\|47883_49857_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_043897884.1\|49877_50759_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_020830892.1\|51067_51361_+	GYD domain-containing protein	NA	NA	NA	NA
WP_011000101.1\|51433_52624_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	1.7e-121	59.9
WP_016726803.1\|52864_53713_+	lysophospholipid acyltransferase family protein	NA	NA	NA	NA
WP_016726804.1\|53730_54624_+	lauroyl acyltransferase	NA	NA	NA	NA
WP_043885954.1\|54702_55581_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_011000105.1\|55635_56463_+	polyphosphate kinase 2 family protein	NA	NA	NA	NA
WP_016722549.1\|56582_57263_-	orotate phosphoribosyltransferase	NA	NA	NA	NA
WP_011000107.1\|57294_58080_+	exodeoxyribonuclease III	NA	NA	NA	NA
WP_086004752.1\|58495_59297_+\|transposase	IS5-like element IS1421 family transposase	NA	NA	NA	NA
WP_020829879.1\|59432_60434_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011000146.1\|61871_62327_+	universal stress protein	NA	NA	NA	NA
WP_011000145.1\|63161_65000_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	A7IW18	Paramecium_bursaria_Chlorella_virus	2.1e-150	46.3
WP_016722521.1\|65113_66481_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7I9	Chrysochromulina_ericina_virus	1.8e-34	37.7
WP_173361999.1\|66652_67636_+	hypothetical protein	NA	NA	NA	NA
WP_011000142.1\|67720_68659_-\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.5e-101	70.1

DBSCAN-SWA_2

302087 : 389250

Acidithiobacillus_phage(47.5%)

tail,terminase,capsid,head,portal,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_064047877.1\|302087_303476_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	8.1e-216	81.4
WP_016722453.1\|303472_303922_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	8.8e-55	71.6
WP_173940729.1\|304224_305403_-	hypothetical protein	NA	NA	NA	NA
WP_173940730.1\|305562_307800_-	hypothetical protein	K4I1D0	Acidithiobacillus_phage	9.7e-288	66.2
WP_064047874.1\|307849_308311_-	helix-turn-helix domain-containing protein	K4ICM4	Acidithiobacillus_phage	6.9e-47	64.1
WP_089190378.1\|308539_308803_+	DNA-binding protein	K4I3X3	Acidithiobacillus_phage	5.3e-20	69.3
WP_016725622.1\|308813_309296_+	hypothetical protein	K4HZ96	Acidithiobacillus_phage	1.0e-45	58.8
WP_139233340.1\|309292_309844_+	HNH endonuclease	A0A172JFU7	Citrobacter_phage	2.2e-23	39.2
WP_011003123.1\|309815_310721_+	ATP-binding protein	K4HZX9	Acidithiobacillus_phage	2.4e-104	68.2
WP_016725624.1\|310717_311365_+	hypothetical protein	K4ICM8	Acidithiobacillus_phage	7.9e-81	72.6
WP_038937632.1\|311372_311885_+	hypothetical protein	K4I3X7	Acidithiobacillus_phage	4.6e-52	66.9
WP_016725626.1\|311884_312433_+	HNH endonuclease	A0A1B0TRC1	Escherichia_phage	3.1e-22	39.3
WP_011003119.1\|312419_313178_+	hypothetical protein	K4HZA0	Acidithiobacillus_phage	1.3e-82	62.1
WP_016725627.1\|313174_313435_+	DNA-binding protein	K4I1D6	Acidithiobacillus_phage	8.4e-18	76.8
WP_173940731.1\|313431_315720_+	hypothetical protein	K4HZY1	Acidithiobacillus_phage	1.1e-286	63.6
WP_118940519.1\|315850_316315_+	hypothetical protein	K4ICN3	Acidithiobacillus_phage	1.7e-53	66.9
WP_011003115.1\|316316_316526_+	hypothetical protein	NA	NA	NA	NA
WP_021154679.1\|316518_316902_+	hypothetical protein	NA	NA	NA	NA
WP_016725341.1\|316956_317223_+	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA
WP_118940520.1\|317222_317522_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_064047870.1\|318171_319572_+	site-specific DNA-methyltransferase	K4I3Y2	Acidithiobacillus_phage	8.5e-165	62.8
WP_020833017.1\|319568_320789_+	site-specific DNA-methyltransferase	A0A2H4JGF1	uncultured_Caudovirales_phage	1.4e-192	80.5
WP_020371857.1\|320831_321197_-	hypothetical protein	A0A2H4JI44	uncultured_Caudovirales_phage	8.5e-32	58.0
WP_016726852.1\|321421_321610_-	hypothetical protein	K4HZY7	Acidithiobacillus_phage	1.2e-13	66.0
WP_020833014.1\|321731_322247_-	DUF3489 domain-containing protein	A0A2H4JE21	uncultured_Caudovirales_phage	2.3e-22	68.7
WP_107523986.1\|322352_322691_-	hypothetical protein	NA	NA	NA	NA
WP_020833012.1\|322710_323247_+	hypothetical protein	A0A2H4JCL4	uncultured_Caudovirales_phage	5.5e-72	81.5
WP_020833011.1\|323246_325229_+\|terminase	phage terminase large subunit family protein	A0A2H4JIC6	uncultured_Caudovirales_phage	0.0e+00	85.1
WP_016727881.1\|325272_325782_+	hypothetical protein	A0A0F6WCR7	Sinorhizobium_phage	2.8e-25	44.4
WP_020833053.1\|325792_326185_+	hypothetical protein	NA	NA	NA	NA
WP_020833008.1\|326185_326407_+	hypothetical protein	A0A2H4JCJ9	uncultured_Caudovirales_phage	1.3e-11	57.5
WP_058908381.1\|326406_327954_+\|portal	phage portal protein	A0A1B2LRR5	Wolbachia_phage	7.3e-149	57.1
WP_058908382.1\|327963_329214_+	S49 family peptidase	K4HZZ6	Acidithiobacillus_phage	1.0e-60	41.1
WP_071508058.1\|329223_329601_+\|head	head decoration protein	A0A1B2LRT0	Wolbachia_phage	2.3e-24	48.8
WP_021154689.1\|329607_330612_+\|capsid	major capsid protein	A0A1B2LRS0	Wolbachia_phage	2.5e-110	67.2
WP_021154690.1\|330614_330917_+	hypothetical protein	NA	NA	NA	NA
WP_016727774.1\|330922_331369_+	hypothetical protein	NA	NA	NA	NA
WP_058908386.1\|331495_332269_+	hypothetical protein	A0A2D2W2E0	Stenotrophomonas_phage	3.1e-47	43.6
WP_016723647.1\|332277_332673_+	hypothetical protein	NA	NA	NA	NA
WP_038938671.1\|332669_332891_+	hypothetical protein	NA	NA	NA	NA
WP_020832998.1\|332865_333510_+	hypothetical protein	NA	NA	NA	NA
WP_016723655.1\|333552_333843_-	H-NS histone family protein	NA	NA	NA	NA
WP_020832996.1\|334028_335495_-	type III secretion system YopJ family effector PopP2	NA	NA	NA	NA
WP_071895622.1\|336104_337232_+	DNA cytosine methyltransferase	Q6J1P4	Burkholderia_virus	9.1e-101	54.6
WP_173940732.1\|337297_341401_+\|tail	phage tail tape measure protein	A0A0P0ZCJ4	Stx2-converting_phage	3.5e-25	27.8
WP_020832994.1\|341406_341802_+	hypothetical protein	A0A0M4UTA7	Ralstonia_phage	1.6e-31	52.3
WP_173940733.1\|341802_345393_+	hypothetical protein	A0A0M4U447	Ralstonia_phage	0.0e+00	53.2
WP_173940734.1\|345404_346571_+	hypothetical protein	NA	NA	NA	NA
WP_173940735.1\|346574_347057_+	hypothetical protein	A0A0M4TU90	Ralstonia_phage	9.8e-12	32.4
WP_173940736.1\|347053_347452_+	hypothetical protein	NA	NA	NA	NA
WP_173940737.1\|347456_349301_+	hypothetical protein	A0A0M4UKC5	Ralstonia_phage	1.3e-107	46.4
WP_058907698.1\|349310_349535_+	hypothetical protein	NA	NA	NA	NA
WP_003270772.1\|349602_349893_+	membrane protein	K4I011	Acidithiobacillus_phage	3.1e-13	47.6
WP_020832987.1\|349889_350366_+	hypothetical protein	K4ICR8	Acidithiobacillus_phage	1.4e-71	85.9
WP_058907697.1\|350362_350824_+	lysozyme	K4I410	Acidithiobacillus_phage	4.3e-65	81.0
WP_020832985.1\|350891_351191_+	hypothetical protein	NA	NA	NA	NA
WP_043885536.1\|351253_351592_-	DUF1484 domain-containing protein	NA	NA	NA	NA
WP_143012824.1\|361043_361763_+	hypothetical protein	NA	NA	NA	NA
WP_075463064.1\|362524_365065_+	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	7.5e-18	31.2
WP_075463066.1\|365076_366828_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_071893100.1\|366840_367686_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_016726423.1\|368186_368975_+	DUF746 domain-containing protein	NA	NA	NA	NA
WP_043897847.1\|369723_370224_+	hypothetical protein	NA	NA	NA	NA
WP_043876768.1\|371739_372540_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_011003055.1\|372718_373297_-	adenylyl-sulfate kinase	A0A2P1ELS9	Moumouvirus	4.5e-19	38.7
WP_020832973.1\|373293_374196_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_081049985.1\|374208_375372_-	glycosyl transferase family 8	NA	NA	NA	NA
WP_043897846.1\|375368_377471_-	sulfotransferase family protein	NA	NA	NA	NA
WP_043897845.1\|377633_380672_-	autotransporter domain-containing protein	NA	NA	NA	NA
WP_016724436.1\|380836_381532_+	response regulator transcription factor	NA	NA	NA	NA
WP_043897844.1\|381597_383529_+	sensor histidine kinase	NA	NA	NA	NA
WP_020832966.1\|383855_384986_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_020832965.1\|385027_386308_-	TIGR03862 family flavoprotein	NA	NA	NA	NA
WP_011003046.1\|386593_387430_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_020831502.1\|387921_389250_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

921246 : 963626

uncultured_Mediterranean_phage(42.86%)

transposase,tRNA,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011002630.1\|921246_922359_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_028853617.1\|922447_924046_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA
WP_016723723.1\|924071_924680_-	glutathione S-transferase	NA	NA	NA	NA
WP_011002627.1\|924913_926287_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	3.8e-109	47.0
WP_020832660.1\|926533_927118_+	cytochrome b	NA	NA	NA	NA
WP_016723720.1\|927218_927785_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_019718267.1\|927842_928439_+	polyisoprenoid-binding protein	NA	NA	NA	NA
WP_016725726.1\|928572_929901_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_016723719.1\|929960_930929_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	8.8e-44	37.7
WP_011002622.1\|931006_932887_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_063612207.1\|933008_933341_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	4.0e-12	40.2
WP_016723717.1\|933449_934601_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	9.4e-77	42.1
WP_020832657.1\|934594_935683_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_020832656.1\|935759_937952_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_016723714.1\|937970_938174_-	hypothetical protein	NA	NA	NA	NA
WP_011002617.1\|938185_938626_-	hypothetical protein	NA	NA	NA	NA
WP_081263796.1\|938849_939029_-	hypothetical protein	NA	NA	NA	NA
WP_020832653.1\|939172_940303_-	DSD1 family PLP-dependent enzyme	NA	NA	NA	NA
WP_043897937.1\|940445_941387_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020832651.1\|941577_942801_-	diaminopropionate ammonia-lyase	NA	NA	NA	NA
WP_020832650.1\|942845_944132_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_020832649.1\|944497_944959_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA
WP_020832648.1\|945169_946366_-	amidohydrolase	NA	NA	NA	NA
WP_016721870.1\|946836_947823_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7
WP_043897800.1\|948928_949471_-	hypothetical protein	NA	NA	NA	NA
WP_172833515.1\|949540_950029_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_020832638.1\|950046_952311_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_020832639.1\|952360_953080_-	molecular chaperone	NA	NA	NA	NA
WP_011002604.1\|953198_953702_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_011002605.1\|953751_954255_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_016723696.1\|955600_955861_+	hypothetical protein	NA	NA	NA	NA
WP_028853597.1\|955877_956738_-	transglutaminase family protein	NA	NA	NA	NA
WP_011002607.1\|956834_957131_-	hypothetical protein	NA	NA	NA	NA
WP_011002608.1\|957281_957599_-	hypothetical protein	NA	NA	NA	NA
WP_020832642.1\|957717_957855_-	hypothetical protein	NA	NA	NA	NA
WP_020832643.1\|958938_959223_-	hypothetical protein	NA	NA	NA	NA
WP_011002610.1\|959316_959643_-	hypothetical protein	NA	NA	NA	NA
WP_081263795.1\|960085_960250_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	3.2e-07	57.1
WP_028853600.1\|961019_961274_+	hypothetical protein	NA	NA	NA	NA
WP_173940760.1\|961805_962015_-	hypothetical protein	NA	NA	NA	NA
WP_016723702.1\|962065_962383_+	hypothetical protein	NA	NA	NA	NA
WP_016721870.1\|962639_963626_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7

DBSCAN-SWA_4

1033992 : 1044131

Hokovirus(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_021155204.1\|1033992_1035954_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	1.4e-149	50.8
WP_011002544.1\|1036088_1037231_+	molecular chaperone DnaJ	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	2.9e-22	32.7
WP_020832589.1\|1037266_1039147_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	A0A0B5J984	Pandoravirus	2.7e-57	37.4
WP_011002542.1\|1039102_1039789_-	energy-coupling factor ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	1.5e-13	27.2
WP_016724068.1\|1039796_1040504_-	ABC transporter permease	NA	NA	NA	NA
WP_016724069.1\|1040515_1041340_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	2.4e-34	31.3
WP_016724070.1\|1041396_1042041_-	deoxynucleoside kinase	M1IA15	Paramecium_bursaria_Chlorella_virus	8.3e-06	27.3
WP_003271964.1\|1042074_1042584_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_021155205.1\|1042583_1044131_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	3.6e-23	33.6

DBSCAN-SWA_5

1134301 : 1143585

Phage_21(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_016725925.1\|1134301_1135552_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	7.4e-11	61.1
WP_016724132.1\|1135778_1135991_+	hypothetical protein	NA	NA	NA	NA
WP_011002384.1\|1136179_1136800_-	DUF4126 domain-containing protein	NA	NA	NA	NA
WP_011002383.1\|1137449_1137653_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	1.7e-21	75.8
WP_011002382.1\|1138206_1138533_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	7.9e-13	37.4
WP_011002381.1\|1138529_1140818_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.1e-169	42.3
WP_011002380.1\|1140887_1141334_-	dUTP diphosphatase	Q2NP83	Xanthomonas_phage	5.1e-47	63.7
WP_020832525.1\|1141330_1142383_-	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_020832524.1\|1142379_1143585_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	3.4e-37	33.6

DBSCAN-SWA_6

1709184 : 1716323

Synechococcus_phage(16.67%)

transposase,integrase

attL 1711054:1711073|attR 1725850:1725869

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020832213.1\|1709184_1710051_+	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	2.0e-10	41.4
WP_016727001.1\|1710068_1710797_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	2.8e-34	37.9
1711054:1711073	attL	NA	NA	NA	NA
WP_173940768.1\|1711105_1712323_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.2e-119	53.8
WP_016721735.1\|1712536_1713502_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.6e-178	98.1
WP_155738951.1\|1713498_1713648_+	hypothetical protein	NA	NA	NA	NA
WP_173940769.1\|1713962_1714157_+	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	2.9e-07	48.0
WP_173940770.1\|1714156_1714531_+	hypothetical protein	NA	NA	NA	NA
WP_173940771.1\|1714517_1716323_+	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	3.5e-70	34.4
1725850:1725869	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1789343 : 1816429

Leptospira_phage(33.33%)

transposase,integrase

attL 1801557:1801604|attR 1816708:1816755

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020830182.1\|1789343_1790168_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_173940775.1\|1790248_1791217_+	hypothetical protein	NA	NA	NA	NA
WP_020832175.1\|1791213_1792218_+	DUF1911 domain-containing protein	NA	NA	NA	NA
WP_064047844.1\|1793475_1794534_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_081282089.1\|1795212_1796304_+	DUF262 domain-containing protein	A0A1V0SDN5	Indivirus	2.0e-07	30.4
WP_052328807.1\|1796306_1796813_+	hypothetical protein	NA	NA	NA	NA
WP_043897749.1\|1797121_1797355_+	hypothetical protein	NA	NA	NA	NA
WP_020832173.1\|1797632_1799189_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.0e-75	36.6
WP_020829705.1\|1799221_1799575_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	1.2e-19	46.7
WP_043885814.1\|1799571_1800054_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_144061896.1\|1800091_1800988_-	hypothetical protein	NA	NA	NA	NA
1801557:1801604	attL	NA	NA	NA	NA
WP_020832172.1\|1801716_1802736_+\|integrase	site-specific integrase	A0A0A1I5U0	Burkholderia_phage	2.7e-51	36.0
WP_144061895.1\|1802769_1803816_-	hypothetical protein	NA	NA	NA	NA
WP_043897746.1\|1804228_1804690_+	hypothetical protein	NA	NA	NA	NA
WP_043897652.1\|1804927_1806133_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_173940776.1\|1806503_1807364_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA
WP_043897745.1\|1807478_1808087_-	hypothetical protein	NA	NA	NA	NA
WP_052328806.1\|1808179_1808836_-	hypothetical protein	NA	NA	NA	NA
WP_043897744.1\|1809615_1810194_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	3.4e-27	42.6
WP_043897743.1\|1810904_1811711_+	carbohydrate porin	NA	NA	NA	NA
WP_043897741.1\|1811809_1812115_+	hypothetical protein	NA	NA	NA	NA
WP_144061894.1\|1812143_1812824_+	hypothetical protein	NA	NA	NA	NA
WP_144061893.1\|1812859_1815163_-	AAA family ATPase	NA	NA	NA	NA
WP_043897920.1\|1815373_1816429_-\|integrase	site-specific integrase	A0A1L7DQ84	Ralstonia_phage	3.8e-101	56.9
1816708:1816755	attR	NA	NA	NA	NA

DBSCAN-SWA_8

2767240 : 2827929

Acidithiobacillus_phage(26.32%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_020831502.1\|2767240_2768569_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_011000869.1\|2768703_2769606_-	cysteine synthase CysM	A0A1X9I5K7	Streptococcus_phage	8.2e-52	40.8
WP_011000868.1\|2769709_2770027_-	ComEA family DNA-binding protein	NA	NA	NA	NA
WP_020831501.1\|2770156_2771152_-	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	7.0e-28	32.3
WP_019717811.1\|2771148_2772096_-	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	9.0e-17	27.6
WP_016723343.1\|2772122_2773496_-	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	1.9e-76	38.9
WP_011000864.1\|2773555_2774833_-	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA
WP_043897668.1\|2774836_2775166_-	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_016723345.1\|2775351_2775774_-	integration host factor subunit beta	A7KV42	Bacillus_phage	4.7e-10	38.9
WP_011000861.1\|2775810_2777499_-	30S ribosomal protein S1	NA	NA	NA	NA
WP_011000860.1\|2777638_2778331_-	(d)CMP kinase	NA	NA	NA	NA
WP_020831497.1\|2778354_2779665_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_029240256.1\|2779686_2780583_-	prephenate dehydrogenase	NA	NA	NA	NA
WP_016723348.1\|2780679_2781804_-	histidinol-phosphate transaminase	A0A142C026	Faustovirus	1.2e-15	27.7
WP_011000856.1\|2781862_2782978_-	prephenate dehydratase	NA	NA	NA	NA
WP_064047660.1\|2783066_2784203_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.4e-87	46.6
WP_016723349.1\|2784317_2784878_-	DUF2059 domain-containing protein	NA	NA	NA	NA
WP_064047659.1\|2785004_2787662_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.0e-102	33.5
WP_011000852.1\|2788070_2788727_+	OmpA family protein	NA	NA	NA	NA
WP_020831496.1\|2788884_2789376_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_019717804.1\|2789537_2790254_+	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA
WP_011000849.1\|2790250_2790940_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_020831495.1\|2791048_2794834_+	DUF748 domain-containing protein	NA	NA	NA	NA
WP_058908849.1\|2795736_2796636_-	hypothetical protein	NA	NA	NA	NA
WP_016721870.1\|2797819_2798806_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7
WP_016721735.1\|2798962_2799928_+\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.6e-178	98.1
WP_155738951.1\|2799924_2800074_+	hypothetical protein	NA	NA	NA	NA
WP_081282099.1\|2800827_2801268_-	LacI family transcriptional regulator	NA	NA	NA	NA
WP_064820716.1\|2801300_2802683_-	recombinase family protein	K4ICM1	Acidithiobacillus_phage	1.5e-134	59.9
WP_038938302.1\|2802679_2803177_-	DUF2924 domain-containing protein	K4I3X1	Acidithiobacillus_phage	9.2e-21	38.8
WP_071895564.1\|2803177_2803417_-	hypothetical protein	NA	NA	NA	NA
WP_069078908.1\|2805233_2807000_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_118872359.1\|2807078_2807897_-	immunity 49 family protein	NA	NA	NA	NA
WP_016725636.1\|2818969_2819920_+	hypothetical protein	NA	NA	NA	NA
WP_069079307.1\|2820374_2820713_+	DUF1484 domain-containing protein	NA	NA	NA	NA
WP_064048075.1\|2820775_2821075_-	hypothetical protein	NA	NA	NA	NA
WP_011003080.1\|2821142_2821604_-	lysozyme	K4I410	Acidithiobacillus_phage	1.1e-65	80.3
WP_071895569.1\|2821600_2822083_-	HNH endonuclease	A0A076YKQ7	Mycobacterium_phage	4.7e-22	48.3
WP_011003082.1\|2822069_2822552_-	hypothetical protein	K4ICR8	Acidithiobacillus_phage	4.8e-59	71.6
WP_064047856.1\|2822548_2822839_-	hypothetical protein	K4I011	Acidithiobacillus_phage	7.0e-13	47.6
WP_011003084.1\|2822905_2823130_-	hypothetical protein	NA	NA	NA	NA
WP_020830964.1\|2823364_2824384_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.1e-43	33.9
WP_155738951.1\|2824409_2824559_-	hypothetical protein	NA	NA	NA	NA
WP_016721735.1\|2824555_2825521_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.6e-178	98.1
WP_155738996.1\|2825719_2826352_+	hypothetical protein	NA	NA	NA	NA
WP_011003086.1\|2826510_2827047_-	hypothetical protein	A0A0M4UKC5	Ralstonia_phage	1.8e-46	50.3
WP_173940790.1\|2827104_2827929_+\|transposase	IS5 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP052125

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP052125_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052125_1

1044664-1044841

Orphan

Consensus_repeat	Method
GCGGGCGCGCAAGCACTGGCTGCCAACACCGCGCTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP052125_1

>merge|NZ_CP052125|1|1044664-1044841|PILER-CR
GGCGCGCAAGCACTGGCCGACAACACTGCGCTCACCACGCTCCGCGTCACCGGCAATCAGATCGCTATGGCGGGCGCGCAAGCACTGGCTGCCAATCGCAGTCTGACCAAGCTCAATATCAGCCAGAATGACATCCGGTCCGCGGGCGCGCAGGCACTGGCTGCCAACACCTCGCTCA

>NZ_CP052125|1|1|1044664-1044841|PILER-CR
GGCGCGCAAGCACTGGCCGACAACACTGCGCTCACCA	CGCTCCGCGTCACCGGCAATCAGATCGCTATGGCG
GGCGCGCAAGCACTGGCTGCCAATCGCAGTCTGACCA	AGCTCAATATCAGCCAGAATGACATCCGGTCCGCGGGCGCGCAGGC
ACTGGCTGCCAACACCTCGCTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052125.1\|WP_016723110.1\|1037805_1038474_-\|DsbA-family-protein	unknown	unknown	gnl\|CDD\|225355
NZ_CP052125.1\|WP_020829705.1\|1047875_1048229_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP052125.1\|WP_016723104.1\|1046262_1046925_+\|membrane-protein	unknown	unknown	gnl\|CDD\|187560
NZ_CP052125.1\|WP_043898081.1\|1050648_1051608_-\|type-III-effector-protein	unknown	unknown	gnl\|CDD\|185269
NZ_CP052125.1\|WP_020832173.1\|1048261_1049818_+\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP052125.1\|WP_064047844.1\|1056130_1057189_-\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP052125.1\|WP_080511113.1\|1036814_1037729_-\|LLM-class-oxidoreductase	unknown	unknown	gnl\|CDD\|274657
NZ_CP052125.1\|WP_020829649.1\|1055075_1056092_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP052125.1\|WP_043898082.1\|1045641_1046211_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP052125.1\|WP_043898203.1\|1034905_1035919_-\|S1/P1-nuclease	unknown	unknown	gnl\|CDD\|211382
NZ_CP052125.1\|WP_019719553.1\|1032088_1034032_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP052125.1\|WP_043885814.1\|1047396_1047879_+\|IS66-family-insertion-sequence-hypothetical-protein	unknown	unknown	gnl\|CDD\|225511
NZ_CP052125.1\|WP_011004207.1\|1038576_1039506_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP052125.1\|WP_020830058.1\|1039645_1040839_+\|FAD-dependent-monooxygenase	unknown	unknown	gnl\|CDD\|235980
NZ_CP052125.1\|WP_020425328.1\|1034051_1034843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052125.1\|WP_011004209.1\|1040920_1041862_-\|transcriptional-regulator-GcvA	unknown	unknown	gnl\|CDD\|182990
NZ_CP052125.1\|WP_086004752.1\|1054227_1055030_-\|IS5-like-element-IS1421-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_CP052125.1\|WP_011004204.1\|1036327_1036711_-\|DUF4437-domain-containing-protein	unknown	unknown	gnl\|CDD\|380365
NZ_CP052125.1\|WP_064820800.1\|1057864_1058644_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP052125.1\|WP_016727628.1\|1042158_1043265_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745

Protein	Function_ID	Function_description	E-value
NZ_CP052125.1\|WP_016723110.1\|1037805_1038474_-\|DsbA-family-protein	gnl\|CDD\|225355	COG2761, FrnE, Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism].	2.64414e-87
NZ_CP052125.1\|WP_020829705.1\|1047875_1048229_+\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	9.83573e-52
NZ_CP052125.1\|WP_016723104.1\|1046262_1046925_+\|membrane-protein	gnl\|CDD\|187560	cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs. Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	8.50909e-14
NZ_CP052125.1\|WP_043898081.1\|1050648_1051608_-\|type-III-effector-protein	gnl\|CDD\|185269	PRK15371, PRK15371, YopJ family type III secretion system effector serine/threonine acetyltransferase.	1.89645e-14
NZ_CP052125.1\|WP_020832173.1\|1048261_1049818_+\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	7.39248e-107
NZ_CP052125.1\|WP_064047844.1\|1056130_1057189_-\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	5.56151e-18
NZ_CP052125.1\|WP_080511113.1\|1036814_1037729_-\|LLM-class-oxidoreductase	gnl\|CDD\|274657	TIGR03571, lucif_BA3436, luciferase-type oxidoreductase, BA3436 family. This family is a distinct subgroup among members of the luciferase monooxygenase domain family. The larger family contains both FMN-binding enzymes (luciferase, alkane monooxygenase) and F420-binding enzymes (methylenetetrahydromethanopterin reductase, secondary alcohol dehydrogenase, glucose-6-phosphate dehydrogenase). Although some members of the domain family bind coenzyme F420 rather than FMN, members of this family are from species that lack the genes for F420 biosynthesis. A crystal structure, but not function, is known (but unpublished) for the member from Bacillus cereus, PDB\|2B81. [Unknown function, Enzymes of unknown specificity].	5.36069e-159
NZ_CP052125.1\|WP_020829649.1\|1055075_1056092_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	4.17985e-103
NZ_CP052125.1\|WP_043898082.1\|1045641_1046211_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.42283e-14
NZ_CP052125.1\|WP_043898203.1\|1034905_1035919_-\|S1/P1-nuclease	gnl\|CDD\|211382	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes. This family summarizes both S1 and P1 nucleases (EC:3.1.30.1) which cleave RNA and single stranded DNA with no base specificity. S1 nuclease is more active on DNA than RNA. Its reaction products are oligonucleotides or single nucleotides with 5' phosphoryl groups. Although its primary substrate is single-stranded, it may also introduce single-stranded breaks in double-stranded DNA or RNA, or DNA-RNA hybrids. It is used as a reagent in nuclease protection assays and in removing single stranded tails from DNA molecules to create blunt ended molecules and opening hairpin loops generated during synthesis of double stranded cDNA. P1 nuclease cleaves its substrate at every position yielding nucleoside 5' monophosphates, and it does not recognize or act on double-stranded DNA. It is useful at removing single stranded strands hanging off the end of double stranded DNA and at completely cleaving melted DNA for simple DNA composition analysis.	2.34622e-35
NZ_CP052125.1\|WP_019719553.1\|1032088_1034032_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	3.52392e-82
NZ_CP052125.1\|WP_043885814.1\|1047396_1047879_+\|IS66-family-insertion-sequence-hypothetical-protein	gnl\|CDD\|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.84726e-05
NZ_CP052125.1\|WP_011004207.1\|1038576_1039506_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.57784e-88
NZ_CP052125.1\|WP_020830058.1\|1039645_1040839_+\|FAD-dependent-monooxygenase	gnl\|CDD\|235980	PRK07236, PRK07236, hypothetical protein; Provisional.	0
NZ_CP052125.1\|WP_011004209.1\|1040920_1041862_-\|transcriptional-regulator-GcvA	gnl\|CDD\|182990	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional.	2.14463e-153
NZ_CP052125.1\|WP_086004752.1\|1054227_1055030_-\|IS5-like-element-IS1421-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	7.67518e-30
NZ_CP052125.1\|WP_011004204.1\|1036327_1036711_-\|DUF4437-domain-containing-protein	gnl\|CDD\|380365	cd02237, cupin_DAD_ChrR, 2,4'-Dihydroxyacetophenone dioxygenase (DAD) and anti-sigma factor ChrR, and similar proteins; cupin domain. This family includes the proteins 2,4'-Dihydroxyacetophenone dioxygenase (DAD) and anti-sigma factor ChrR. DAD catalyzes the oxidation of 2,4'-dihydroxyacetophenone to 4-hydroxybenzoate and formate as part of the 4-hydroxyacetophenone catabolic pathway. The enzyme is a homotetramer containing one iron per molecule of enzyme. Anti-sigma factor ChrR is a member of the ZAS (Zn2+ anti-sigma) subfamily of group IV anti-sigmas. It inhibits transcriptional activity by binding to the Rsp extra cytoplasmic function (ECF) sigma factor E (sigmaE). Some ChrR members contain tandem repeats of two distinct homologous functional domains. Members of this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	4.62061e-07
NZ_CP052125.1\|WP_064820800.1\|1057864_1058644_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.50595e-73
NZ_CP052125.1\|WP_016727628.1\|1042158_1043265_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	7.9535e-54

>NZ_CP052125.1|WP_016727628.1|1042158_1043265_+|Gfo/Idh/MocA-family-oxidoreductase
MGTAEPSCRWGILGTAGIARKNWHAILHSGNGRIVAVGSRSAQTAQRFIAECQASAPAPYAVEAVEGYDALIRRPDIDALYIPLPTALRAEWAIKAARAGKHIVIEKPCGVTSADLLRIIDAANAAGVQFMDGVMFMHSSRLQAMRSVLDDGASVGDIRRITSHFSFDADAAWVERNSAVEPAGCLGDVGWYSIRLALFAMQYSMPVEVRGRILRSVKRPDGVGVVPTEFVGELLFDNGVTAALYNAFTTSRQQWADISGSKGYLHLKDFVLPHYGNEVAFTVGNDRFGGDGCFFNLERHEKTVSLPEYSNNHRTAQETGLYRTFGGLVLSGKREPFWPEVALKTQRVMDALLLSANAGGGPVAPIPA
>NZ_CP052125.1|WP_011004209.1|1040920_1041862_-|transcriptional-regulator-GcvA
MDLRKLPNLGALKMFEAAARLESFSRAAEALCVTHSAVSHQIRALEAELGMVLFKRDGRRITLTDPGRRYAERIRSALFEIAAATESMRTGDRERRLVISLLPSFAARWLTPRIGRFIERYPEIDVELQSTHVITDFNRDDVDVVLRLSDGNDPDLFVEPLLDEVFFPACAPTFNGGRLPKTPADLADVTLLRSDYEMWRAWFMAAGLEGWAEPRRGVLYQDASQLMQASMEGQGVGLVRRSLAMQEIINGRLVRLFDIDAPSPWTYWFICPQPLLDTFRVRALREWLHEEVAQFRALYERSPTAVTMAGRAA
>NZ_CP052125.1|WP_020830058.1|1039645_1040839_+|FAD-dependent-monooxygenase
MCTQLATHPHPVNPAPRALVIGGSLGGLFAGNLLRRIGWHVDLYERSAHDLDSRGGGIVLQPDVVEVFRRTGVDLGAMDLGVGSVLRTVLRPDGSIRSRHFAPQTQTSWSLIYTTLRAAFGDAHYHQAKTLARIEQNPPAGTVTAHFTDGSSETADLLIGADGGNSAVRRQLWPDKVPTYAGYLAWRGLVPEEAMPPTAREMLHGDFGFANNRGSHILGYLVPGEHNDVRPGHRLYNWVWYRVADTRLLGEIMTDREGRPRGHSIPEGMLDARWVAHLRDDARALLPPAFREIVEATAQPFAQAIRDLASDHMVSGRVVILGAAASIPRPHTAASTSKAAANALALADALQALPDDVPAALSRWEPEQIALGKALRRQGMEAGNYLLFQRPPEGQVA
>NZ_CP052125.1|WP_011004207.1|1038576_1039506_+|LysR-family-transcriptional-regulator
MDRFGALSAFVAVVEHGGFAPAARRLGLAPSSLTRQLNALEASLGTRLMNRSTRSVTLTEAGAQYYDDARRILEELDSADRTVSELAGPPSGLLRVTMPVAFGRLHVAPAIPAFLRRFPGMRLDIRLTDAMVNLVEDRIDVAIRLGALTAPNLVARKLAPHRRVICASPDYLGEHGTPAQPRDLAHHNCLLFDYLTGDSTWTLTRDGKREKVPVSGNLRANGSELLREAAMGGAGMLLMPTWLVGDDIAAGRLVPVLEPWTPTPGADEGESAIWAVYLPNRRGSKKLAGFLDFLAQHFGAPPYWERYRS
>NZ_CP052125.1|WP_016723110.1|1037805_1038474_-|DsbA-family-protein
MTLTVTITSDFICPWCLIGERRLAKAIGALPGDVAVELKWRPFELNPAMRPEGMDRQTYRSLKFGSWERSRMLDAHTVEAARDDGIAFDYAAIAKTPNTFLAHRLNWFAARRGLATPIANAVFSAYFEHGRDIGDAAVLADIATENGLGRDEVSAFLAGDEGTRDVREAERAVQAGGVRSVPLFDIDGETVSGAQSLAAFEAALRRAIARTHACGTGACPVS
>NZ_CP052125.1|WP_080511113.1|1036814_1037729_-|LLM-class-oxidoreductase
MFQPGRLTLGLMLPTAPLDHGIPDMTGQLDLAADADRYGFAALWTRDVPLFDPQFNDAGQIYDPWVWLGQLATVTRTIALSTAGIVLPLRHPLHTAKAAASVDIVSAGRFLLGAASGDRPSEYPAFNRSHEARGAVYREYIDVIRRSTAEDYPALSGTFGTLRDLDLLPKPTGRHLPILAIGSAQQSLQWIARNLDGWVTYFRPVETQRPRLDLWRSVVETQAGGAFLPFAQSMFIDLADDPDTAPSPIFLGYRLGRNRLIEELQALARLGANHVGFNLRHSVRPARDVLQELAECVLPLFPSA
>NZ_CP052125.1|WP_011004204.1|1036327_1036711_-|DUF4437-domain-containing-protein
MRKPDVTVVDTNRIPWERLDVPELNAVIPQKICVVDGDTGMAVIKIRYQAGFTNVSHWHNCAHGMYVLDGILVTSAGSFGPGSFVWFPEGTTMSHGAQADNDVTFLFITNKPFDIHYTHLEGDAPGQ
>NZ_CP052125.1|WP_043898203.1|1034905_1035919_-|S1/P1-nuclease
MSPANPLLRAALAWAIMTACVSAFAFGPDGHQTVGELADSLIAGTNAESQVQNILGMTLEQASVWADCAKGVTRTQSGKFVYQGAGHYPECKPFETTTGKSAMVAFVKRNWSGCHPAADEEVCHKQYHYTDVALQRGQYQRGLVGTSEHDIVAAIRAAIIKLQGGTTPSPIDFASKREALLLLSHYVGDIHQPLHVSAVYLDAQGHVVDPDQGTFDPQTKTIGGNSILDAGKKLHFEWDQVPAALKPDQLGVSGVAEARAIPLTSGDIITWPAQWATDTMHSAAPAFSGTAFSAEDASKHWQVTLPANYVSEREAVQRAQLIKAGARLAQLLQAIWP
>NZ_CP052125.1|WP_020425328.1|1034051_1034843_-|hypothetical-protein
MAYSVPLPLRPSLTALVNALLPLASWLETKRYVPDASLLIPPAGPLPWRTGPVSLDADSLALISAFEAWVDDDATNEALAPRWLMLKARPTAFFPYQASSVSAWRAARGLSPDAAFAPFTGPGANMSYLLARPGAPADSGDPVPRARYYDQGFALLQSAIDQAGGPITDWPAFANALLSNAAAAWPATAVVSSSLFIKRLTCDLLIACMDQQNPALAGRDPIWLRAVLIEAGENRHRGNEYGPAQTAVAVVGVLDTLASLPQA
>NZ_CP052125.1|WP_019719553.1|1032088_1034032_-|GMC-family-oxidoreductase
MKSKPDFLIVGSGGGGGTIAWVLASAGYDVLILEQGRNLAQQLRNPVLPFDPAVHDEELFRLRKPDPKRRLRGDYNTFRDLGTRDPARAFDGGWTGSVLGGGSVLWGTWSFRPLPIDFRLKTYYERTGELGQLQKEGYNVADWPLAYQEMMPYFHVAETLLGVSGDRAGMNRSIRESAWYQDLRTRFGGEAWFGTDAQWLPDAAFPLGAYPTTPVGRIVSDGMDHKGMHPFPTPTAIVQPGSAGFGTQAAIANALNQHRDELDGVLWNRPAEQLWSSQIRQACNMCGYCGEYLCWGRTSPKWGTADTTLRELGQRDNAEIRCNAKTLEVLYDAASRRATGVAYLDLTDPDHPRRVEQLAETVIISCGAVQTSRLLLLSGPPEGLGNSSGQLGRNAMFHLFGLGMRTVLGEAFQGRLHGELGPTGNTSTFDTYFVRDGDGRWIKGGHLTSAAKKNPLEDAVNAVNGSSKAGAFLDQLLVNNRTFEIRLTGDDLPCAENRVSLDPTHVDEYGVPVARISRRSISDAAGNKFVGPNEQRLDAAAQGAMKAVFELYAARRGALAAAPKPTQAILSLVGDHQMGTCRMGEDPATSVVNRYGRLHDVENVFVVDSSFMPTGLGLNPMVTVVANALRVGTHIVTRLQQGSMPGH
>NZ_CP052125.1|WP_043898082.1|1045641_1046211_+|TetR/AcrR-family-transcriptional-regulator
MARPRSEDKRQTILRAATQLFAEEGLNAPTARIAKAAGVAEGTIFTYFANKDVLMNQLYLELKSQLRLALVPPPESAALREQVWLAWRTYVNWGVAHPEEHQVLAKLALSPKITETTQAEGSRAFCDVSCLLERAMAEGALRNQSPEFVGAMMGAMGDVTMVFIRNNPTSLETTCQDGFTAFWNAITGV
>NZ_CP052125.1|WP_016723104.1|1046262_1046925_+|membrane-protein
MRIILFGASGMVGASALREALKAPEVESVLCIGRRSCGIEHHKLRELRLPDLFDFAAVEDQLTGFDACIWAIGISSVGLDEIAYAKVTEELTLAWADVLLRLNPEFSFCYCSAGGAGGRSMWARVRQRVERALQAMPFRHAGAVRPGFIRPGPGIRSRTPAYQAGIVLLTPIFPLFPFFVRVFPFLFTTSEILGRAMLRVVEGRADRFILESTDINRLGA
>NZ_CP052125.1|WP_043885814.1|1047396_1047879_+|IS66-family-insertion-sequence-hypothetical-protein
MTIEDDLSYLPLRVVRVGDTGKRTFDAEDKRRLIEACRRPGASLSGMALKAGVNANQLYKWVHGRGRKRGQADEATAPDRDADVRSAFVPVVAISDVAAPIGAVPESAASARREAASPALPAAALARLTARLPNGVTVALECRGQDAGLVKAMIEALGAR
>NZ_CP052125.1|WP_020829705.1|1047875_1048229_+|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MTFHFDEGLKVYLHRDAVDFRKSINGLAVLVEQAMGLDPFAAAVYVFRNRRADRIKILGWDRNGFWLLFKRLEQDRFAWPRQAAVATLSVEQLHWLLQGIDIEAMQRHPRRAYHRAA
>NZ_CP052125.1|WP_020832173.1|1048261_1049818_+|IS66-family-transposase
MPTTVTITAEEYEALRKEIARTSGELRVVTVERDLLKEQLKAFQRQLFAAKSEVRGSEQKDLFLNEAEALAAGTAAPAQEEEGTPAIEVPAHTRKKRGRKPLDPALPRVEVRHELPESERVCPHDGQALIEIGVEVSEQLDIVPQQIRVIQHQRVKYACPCCDGSIKTTPAPARVIPKGLLTESALAWCITAKYQDGLPLYRQAALLHRFGGDLSRSTLAASVVRVGQAVQPLINLLRDHLLDAEVVYGDETPVQVLKEPGRAAQSKSFLWAQMNGSGPPVRLFTYSPTRSAAQAATLYAGIRSGSALMTDGYAPYDDIANRYELVHLGCWAHARRYLIEAEEALPKAKRAEHPVAGFIERIGKLFAVEAQTEDMTAQQRQQVRAERSRPVLGELEALLLQHLHTVLPQSLFGKALHYLHGQWPKLTRYIENGAWPISNNPCENAIRPFVVGRRNWLFCDTVAGANASANLYSLVETAKASGVDPYQYLVAALKLLPKAQTADDYEALLPWNLTSAQS
>NZ_CP052125.1|WP_043898081.1|1050648_1051608_-|type-III-effector-protein
MDLARKHYPALTGYLERLETAYQSSTPPDPIEDIDHMEAIIKGLNIADPMLNLHFDKICAEDSPEQIREYVFAKKLEAELRLEPRQRSSNGWREIIDDGDHRIAMGIQCSKSSNDVSILVIDSRSMDRASFKSETKKKWDRVVTAISPDIQAKLGPSAQPVRLFVAFLAIHTQKSQEGCGIFALSAAKKMASDPAIRKLHKSLLTGMATRQIHQGVVYLVDTPARLLPPSLYKHATSKRVLNDYLVERARSSLSEWDRQDGRVNKKGQTLLERYAAHEIQRLDRTVDYPLLRTYSNSYEAKRIGLIRAALASLTRQHLA
>NZ_CP052125.1|WP_086004752.1|1054227_1055030_-|IS5-like-element-IS1421-family-transposase
MARKKISNELWKALQPLLPVVEPSTKGGRPRVDDRAALNGILFVLHTGIPWEDLPKELGFGSGMTCWRRLREWQANGVWERLHLALLKRLREHDQIDWSRASVDGATVAKPPGGEQTGPNPTDRGKLGSKRHLVVDRRGVPLALMVTGANRHDSVVFEVLVDAIPSVPGLDGRPRCRPDKLHADKGYDFARCRRHLRKRGMTPRIARRGIEKNDRLGKHRWVVERTHAWLAGFGKLRIRFERSLQTHLALLTLACAVICGRFVDRFC
>NZ_CP052125.1|WP_020829649.1|1055075_1056092_-|IS30-family-transposase
MRKYKHLSAEERAVIMIEHRNGGSTRAIARLLGRGASTVSRELARNCDTAAAHYDATQAASAYRVRRQGCRRRRKLLAGNALYQHVHDRLVYWRWSPQQIAAKLRRMYPDDPDQRVSHETIYAAIYAHPRGGLKQAMIDALRQEKPVRGRRRTTLAGGGFVPEALRIVHRPEAIELRQLPGHWEGDLIKGAFNRSCVGTLVERKTRFVVLCRMDGCTARDALEGFTRQMKKLPAFLRESLTYDRGTEMTCHVELSKRLNLDIWFADPHAPWQRGSNENTNGLLRQFLPKGIDLSAATQTQLNDIAKLLNGRPRQTLGWDTPEEAMAKELEIAGLAKCR
>NZ_CP052125.1|WP_064047844.1|1056130_1057189_-|IS630-family-transposase
MNKMNLSEGEREELMAMQRSRTMAVGQVRRARLILLLDHGASREAIMTELRCDSRFITTWKTRFASERLAGLYGRHPGRAPRRDLARLEARVLDYTLRRKPADGSTHWSSRKLAAQLGVPFMTVQRIWRKHDIRPHRLDTHMVSNDPDFEAKAADVIGLYLNPPAHAVVFCVDEKTAIQALDRKDRMLPLSPGRAQSHGFEYKRNGTLSLFAALNTATGEVLGKTASRHTSVQFVAFLTEVVSAHRTTQEIHVICDNVSSHKTPAVQTFLLDHPNVSMHYTPTYSSWLNQVENWFARIQRDVITRGIFTSTKDLDKKLMRYIRQYNKQAAPLKWKYADPMRRIRCDSSGSVD
>NZ_CP052125.1|WP_064820800.1|1057864_1058644_+|response-regulator-transcription-factor
MAEAPLKTRVLLIEDDDRLAQLVSEYLGNYEFTVEVVRRGDIAVAAVREHRPALVILDLMLPHMDGMEVCRRIRAFSRVPVLILTARVDTYDQVAGLEIGADDYVLKPVEPRLLVARARALLRRVASAMPAAEPATPRDDTLVFGEFAISPPNRTVTWRGQPVELKTAEFNLLLILARAAGTVLSRDDILKQLRGIEFDGLDRTVDSGISRLRRRFGDASPEPHKIKTGGDPGYLGDGSASSTRLRSGTDAAGAASAAY

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Crispr_ID: NZ_CP052125_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP052125_2

1978539-1978637

Orphan

Consensus_repeat	Method
ACGCAGAAACGGGTACGCTC	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP052125_2

>merge|NZ_CP052125|2|1978539-1978637|PILER-CR
ACGCAGAAACGGGTACGCTCCGATTTTGGCGACGCCCTATTCATACGCAGAAACGGGTACGCCCCAGCATTTATTGATCCCGCAGAAATGGGTACGCTC

>NZ_CP052125|2|2|1978539-1978637|PILER-CR
ACGCAGAAACGGGTACGCTC	CGATTTTGGCGACGCCCTATTCAT
ACGCAGAAACGGGTACGCCC	CAGCATTTATTGATC
CCGCAGAAATGGGTACGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP052125.1\|WP_020830625.1\|1978699_1980004_-\|NCS2-family-permease	unknown	unknown	gnl\|CDD\|225161
NZ_CP052125.1\|WP_011004918.1\|1972272_1973142_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052125.1\|WP_020830618.1\|1969813_1971316_+\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|237109
NZ_CP052125.1\|WP_043898165.1\|1967606_1968767_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_CP052125.1\|WP_016722280.1\|1971456_1972242_+\|DUF2334-domain-containing-protein	unknown	unknown	gnl\|CDD\|225773
NZ_CP052125.1\|WP_143012726.1\|1968809_1968995_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052125.1\|WP_011004915.1\|1969062_1969437_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368612
NZ_CP052125.1\|WP_020425359.1\|1973536_1973995_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP052125.1\|WP_019719785.1\|1974245_1976636_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223715
NZ_CP052125.1\|WP_020830624.1\|1977120_1978419_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234713
NZ_CP052125.1\|WP_014632190.1\|1965693_1967079_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114

Protein	Function_ID	Function_description	E-value
NZ_CP052125.1\|WP_011004915.1\|1969062_1969437_-\|hypothetical-protein	gnl\|CDD\|368612	pfam05783, DLIC, Dynein light intermediate chain (DLIC). This family consists of several eukaryotic dynein light intermediate chain proteins. The light intermediate chains (LICs) of cytoplasmic dynein consist of multiple isoforms, which undergo post-translational modification to produce a large number of species. DLIC1 is known to be involved in assembly, organisation, and function of centrosomes and mitotic spindles when bound to pericentrin. DLIC2 is a subunit of cytoplasmic dynein 2 that may play a role in maintaining Golgi organisation by binding cytoplasmic dynein 2 to its Golgi-associated cargo.	0.00855189
NZ_CP052125.1\|WP_020830618.1\|1969813_1971316_+\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|237109	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional.	0
NZ_CP052125.1\|WP_043898165.1\|1967606_1968767_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	7.65684e-143
NZ_CP052125.1\|WP_016722280.1\|1971456_1972242_+\|DUF2334-domain-containing-protein	gnl\|CDD\|225773	COG3233, COG3233, Predicted deacetylase [General function prediction only].	1.96839e-94
NZ_CP052125.1\|WP_020830625.1\|1978699_1980004_-\|NCS2-family-permease	gnl\|CDD\|225161	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism].	6.51021e-175
NZ_CP052125.1\|WP_019719785.1\|1974245_1976636_-\|PAS-domain-containing-protein	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.51049e-50
NZ_CP052125.1\|WP_020830624.1\|1977120_1978419_+\|hypothetical-protein	gnl\|CDD\|234713	PRK00283, xerD, tyrosine recombinase.	0.000942474
NZ_CP052125.1\|WP_014632190.1\|1965693_1967079_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	0

>NZ_CP052125.1|WP_020830624.1|1977120_1978419_+|hypothetical-protein
MPSTHPAPDAIAPGPHPAAGASSAVHAATEADLLAHARDRERVQAWLDARAGGARAVGPSTLSQYRMEAERVCWYARAVGKPIARWQREDAHAYLRFLQDPPAWAISARGHARDEAGWTPLRGPLSARSLRQCSVIAANLCGWLQRSGHLRANPFLDDDGIVIALPDAPPATLPPAPPPPHPATALCAPDMALLVDAVRTRVALGREARLRQARDGFLAELLAHAGLRVAELVGARMGDVALHAVPEARRAADPALPPSVWLLGVGAGRAQRWLPCDALMATLRAYRTAFGLSPLPLPGEATPLLLSVRKRSPRRADGTIIDSPALRRDFGERRGIGSRSQLLQIIKAMLAEAAEHARALGHADAAERLAHASLRGLRGAHLRERLASGEAARDIAHALGLAALPSTAVRARKADLTSSILDAARQLAVPRT
>NZ_CP052125.1|WP_019719785.1|1974245_1976636_-|PAS-domain-containing-protein
MKEPVVSHFVPERGITSAPGRSYGTEPLDVFWVDDLLDGTRLHVSAAARQRWGMAPETLCGPREHWLAHVHSGDHAALRAAWQGLAQGRDFALEYRWIGTDGAEHRVRECGYRLPAQGGAATHAVGVVEDMTQRLRTLAELTESEFQLQWLAESIPFPIVQLGPDHCIRFANHAYAQRFGLPAADVLGRHVRELMGHEAYQRVLAHLMKGFAGQRVDFEMELEYPYVGPGRRFIHAAYTPQRGPDGKVVALVCIIEDITERKEAERERFRHQREFVTLVENAPDIIARLDPALRCVYINRAVTEAFGVPSGELIGQALSDSGLPACITGPLEAAAQCAFDTGGEQALTLHLEADAARPHVAHYNARVIPEADRHGEMESALLIIYDVSERTEAERERNALLLREQAARAQAEAAAHARDQFLAVVSHELRSPLNGIQSWAYVLENQLAEGPQPVQRALAGIRTGVAQQVRLIEDLLDATRVMSGKLRLMRQPFPLRTALERALDSVRAQAAERRITLHEAWSLGTEEIDGDADRIQQIVWNLLSNAIKFTQEGGDVWLAADVSGEVARIVVRDNGRGIAPAFVPHLFDPFRQADGSHTRRTGGLGLGLALVKRLTELHGGLVHAQSDGEQHGAIFTVYLPLHEGAELTAALAEDVVRPGPLPSLGGLRVLLIDDQQDAREALATLLGQVHAEVGSAGSGDEAIAQLEAWGGLRRPHAVVCDIALPDEDGYAILQRIRGWERRHLPAGVAQVPAIALTAFAQPHDRARALASGFQEHLSKPVSPRDLVRALRTLARR
>NZ_CP052125.1|WP_020425359.1|1973536_1973995_-|hypothetical-protein
MHQPLRSGVRSPLTRDDTPTQGAAYPPVSGTRPAAAPASTARERVEAALGEPEHEVQSFVHGACLPHERDQYVAEQGSGPRDTIEQAARDIESGLLDTDLHDTQGLECVVRERHAAGHCDPDRELANRTADAIERNRQMPGAPSGGTGERRR
>NZ_CP052125.1|WP_011004918.1|1972272_1973142_-|hypothetical-protein
MQGQLRAVALGCVVVGLLAACGGGDDSGSGSVAASSSGVASPADSASLGTDCFVVPGMGKTATATASVVAPVTVNVATVTGLGAQTFEGQSYTALDVRNRIDQVLNSDQHHTLYMLPNAPYLPAGAITFPSAGDTGPQQRYAYTYAAMTLEQLRSAVVGGKATFSPLVVPTLQPVVPTVADFKLNTPVTLTMFEKRAGGTNPMGASFASNSVKELTLTYAGRESVTVGSATYGQACRMNVSVRRTTPNFNVVPFSIENVGKVTLWFAPNVGLVKFSMDGLDTAIVPAAN
>NZ_CP052125.1|WP_016722280.1|1971456_1972242_+|DUF2334-domain-containing-protein
MSRYLVIAMHDVTPANWPACSVLLSALDEVCPVPKSLLVIPNFHRGPTARSSARFCRVLAERLEQGDELVLHGYAHLDEQPPGGFVDQLIRTHYTAGEGEFSVMPLAAARRRLETGAAWFAANGWPLHGFVAPAWLMSAATWQALDGLPLRYTTTLRHFYLLHPSRSMLAPCLTYSVQTGPRRLASRYYVRWLAHHRAHAPLLRLGLHPTDAAHPDVIRHWQDLLAACLETRLPVTKNGFAQAFAEALMGKPDMPQPEPSY
>NZ_CP052125.1|WP_020830618.1|1969813_1971316_+|RNA-polymerase-factor-sigma-54
MVKAALEMRAKQHLALTPRLQQSVKLLQLSATEFAQEMQEALASNPFLEEVDDNTGAPPEAARPGEAMPGTEADGATADHSPPDEAPLETTTSAIETDPAIAASDEFPADFGSYTSYGPAHHGDGEDSDIGEWVHATPTLREHLRQELLSYRLSERDSLLALTVIEALDDDGYLRQTLFELMPLAPVEPAPTEKEMQIALALVQSLDPPGVAARDLSECLRLQIEARPADTEAEERVQEIAQDIVRSHLPRLAKRDLTHIRRAVGCDEDELREACALIRTLDPRPGLRFSQAHAGYVVPDVIVAKIKGKWVAVTNPAVAPCARINKVYAELFAQTRGHHRTPLAHQLQEARWLIRNAQQRFATIQRVAVAIVAHQKHFLEYGEVAMRPLVLRDVAEELGLHESTISRATGNKFMATPRGIFEFKYFFSRQLATDTGGACSAASVRALLKEMIEAEDAQAPLSDVSLAKMLAEQGVIVARRTVAKYRGLMRIAPAELRRQV
>NZ_CP052125.1|WP_011004915.1|1969062_1969437_-|hypothetical-protein
MQPSRTLTATLLGVALALGVTAALAQTPMAPASTDSQESGTPTRAPGKRTAPPSSAADPAAGASATGEPTSGAGGDMKPHAKKHRHKKPAEGKATGAAAGAQSGGSDAATGMGNPQPGGSKPGQ
>NZ_CP052125.1|WP_143012726.1|1968809_1968995_+|hypothetical-protein
MPPSALARMRVPALARMLATAALARFVAMRAARHVLDPTVQARNVRTASDADWRGDFHWHG
>NZ_CP052125.1|WP_043898165.1|1967606_1968767_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MSLSEAFADDRAVTTGRLPCPPRLADRADTDAIDVFGDAARLTAFANPPAVSVSAPVVADPDFGHLYGHSTVMRTLYGQIGKVAGTLATVLIIGESGTGKELIARTVHDMSPRADQAFIAVNCGAISPNLIESELFGHEKGSFTGALQRHTGYFEQACNGTIFLDEITEMPVEMQVKLLRVLETGTFMRVGGTEPIETRARIIAATNRNLPEAVSDGTFREDLMYRLAVVPLHVPPLRDRDEDIEALAHHFLAQFNAAHQTDKTFARSALSALRQHPWPGNVRELRNAVQRGYILGEKTVELAMPLVSLRSPSRPSVKEGVLNVSVGVTLAEAQRVMILATLEHFRGDKRQAAKTLGVSLKTLYNRLDLYHSQSQSQGTEAAGLPA
>NZ_CP052125.1|WP_014632190.1|1965693_1967079_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MPHILIVEDDASARAALGELVSAEGFTTAQAGSLRDARIQISRHSPDAVLIDLVLPDGNGMDLLEDIPSHSGTEIIVMTGHASVETAVEALRMGAADYLVKPVNFQRLKSILARIPRPGDLKAEIGSLRGELRRLGLFGQMLGNSPAMQTLYDQVSRVAPTEATVLLIGESGTGKELAAQTIHDLSLRRKQPFLPVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLDEITEMPVELQVKLLRVLETGVFMRVGTNREIDTDVRVIAATNRDPEEAVADGKLRADLYHRLNVFPMQLPPLRERGKDVELLAQHFLDQLNAQNSSKKTFLPPAMDTLRAYNWPGNVRELRNYVQRAYIMSDDAGISTEAVPLQVSTTQASSGSTLTIPVGTSLASADKKIILATLEQCGGVKKRAAELLGISLKTLYNRLEEYGSSNSEGENGKAQTTEA
>NZ_CP052125.1|WP_020830625.1|1978699_1980004_-|NCS2-family-permease
MSWLARFFKLEEHQTDVRTEVVAGLTTFLTMAYIVFVNPNILADAGVPHDAVFVATCVAAAIGTAIMGLYANYPIAMAPGMGLNAYFAYSVVKGMGFTWQVALGAVFVSGCLFMLVSLFRIREMIINGIPHSIRIAITAGIGLFLGIVSLRGAGLVVGNPATLVALGDVHQPSVILAVIGFFLIVTLDHLRVKGAILIGILAVTVASFFVAGNTFHGVVSMPPPIAPTLLQLDIQGALSVGILNVVLVFFLVELFDATGTLMGVANRAGLLKAGRMDRLNKALLADSTAIVAGSMLGTSSTTAYIESAAGVQAGGRTGLTALTVAVLFLACLFIAPLAGVVPAYATAPALLYVSCLMLRELVELDWADTTESVPAVLTALMMPFTYSIANGVAFGFVTYSGLKLFGGRWREVPAVVWIISLIFLFRFFYLQAGH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	981524-981558	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1577013-1577047	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	919975-920009	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1024943-1024977	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	903309-903343	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	903309-903343	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1067037-1067071	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1690320-1690354	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	993332-993366	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1329634-1329668	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1465481-1465515	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1072708-1072742	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1069410-1069444	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1045411-1045445	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1044675-1044709	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1132591-1132625	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1132595-1132629	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1160214-1160248	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1132590-1132624	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1044698-1044732	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1160215-1160249	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1044736-1044781	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1044759-1044804	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1044759-1044804	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1044759-1044804	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1044759-1044804	0	1.0
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1044759-1044804	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1995719-1995742	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	2060532-2060555	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1997993-1998016	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP016905	Ralstonia solanacearum strain KACC 10709 plasmid unnamed1	1033874-1033897	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	2068862-2068885	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	1778487-1778510	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	2003541-2003564	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022791	Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence	2132122-2132145	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1999231-1999254	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	1999049-1999072	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	2080332-2080355	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1978534-1978557	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1979183-1979206	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	2132183-2132206	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1978559-1978582	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1986432-1986455	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1967063-1967086	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	2031141-2031164	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	2059262-2059285	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1978559-1978582	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1978559-1978582	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1978559-1978582	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	632928-632951	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	401136-401159	0	1.0
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1090487-1090510	0	1.0
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1370800-1370834	1	0.971
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	39094-39128	1	0.971
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1037053-1037087	1	0.971
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1154159-1154193	1	0.971
NZ_CP052125_1	1.1\|1044701\|35\|NZ_CP052125\|PILER-CR	1044701-1044735	35	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1154169-1154203	1	0.971
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	1370728-1370773	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1067098-1067143	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	981452-981497	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1690381-1690426	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	993393-993438	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1154220-1154265	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1329695-1329740	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1465542-1465587	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1576941-1576986	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1072769-1072814	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1069471-1069516	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	39022-39067	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1045472-1045517	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	919903-919948	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1132652-1132697	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1160275-1160320	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	1154230-1154275	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1132652-1132697	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1160275-1160320	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1132652-1132697	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1132656-1132701	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1160275-1160320	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1160275-1160320	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1160275-1160320	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	1024871-1024916	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1132651-1132696	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	1036981-1037026	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1160276-1160321	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	903237-903282	1	0.978
NZ_CP052125_1	1.2\|1044773\|46\|NZ_CP052125\|PILER-CR	1044773-1044818	46	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	903237-903282	1	0.978
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP021449	Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence	2063183-2063206	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	2017306-2017329	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	2092785-2092808	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	157321-157344	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	591934-591957	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	227286-227309	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1934859-1934882	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1972758-1972781	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	2050999-2051022	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP021765	Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence	2092803-2092826	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1973071-1973094	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	2050999-2051022	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1972759-1972782	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1971962-1971985	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	2050999-2051022	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	2050999-2051022	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	2050999-2051022	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	2048314-2048337	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1973070-1973093	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	2006702-2006725	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	2051004-2051027	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	2131135-2131158	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	2131135-2131158	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	654549-654572	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1938110-1938133	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	921064-921087	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	436025-436048	1	0.958
NZ_CP052125_2	2.1\|1978559\|24\|NZ_CP052125\|PILER-CR	1978559-1978582	24	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	736111-736134	3	0.875

1. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

2. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

3. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

4. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

5. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

6. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

7. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

8. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

9. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

10. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

11. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

12. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

13. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

14. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

15. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

16. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

17. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

18. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

19. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

20. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

21. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

22. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

23. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

24. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

25. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

26. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

27. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

28. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

29. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

30. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

31. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcgctatg	Protospacer
***********************************

32. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

33. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

34. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

35. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

36. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

37. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
**********************************************

38. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

39. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

40. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

41. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP016905 (Ralstonia solanacearum strain KACC 10709 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

42. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

43. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

44. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

45. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022791 (Ralstonia solanacearum strain SL3103 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

46. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

47. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

48. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

49. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

50. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

51. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

52. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

53. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

54. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

55. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

56. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

57. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

58. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

59. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

60. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

61. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

62. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 0, identity: 1.0

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcat	Protospacer
************************

63. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

64. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

65. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

66. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

67. spacer 1.1|1044701|35|NZ_CP052125|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.971

ccacgctccgcgtcaccggcaatcagatcgctatg	CRISPR spacer
ccacgctccgcgtcaccggcaatcagatcggtatg	Protospacer
****************************** ****

68. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

69. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

70. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

71. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

72. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

73. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

74. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

75. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

76. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

77. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

78. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

79. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

80. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

81. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

82. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

83. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

84. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

85. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

86. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

87. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

88. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

89. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

90. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

91. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

92. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

93. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

94. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

95. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

96. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

97. spacer 1.2|1044773|46|NZ_CP052125|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.978

tcgcagtctgaccaagctcaatatcagccagaatgacatccggtcc	CRISPR spacer
tcgcagcctgaccaagctcaatatcagccagaatgacatccggtcc	Protospacer
******.***************************************

98. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP021449 (Ralstonia solanacearum strain SEPPX05 plasmid pSEPPX05, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

99. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

100. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

101. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

102. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

103. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

104. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

105. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

106. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

107. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP021765 (Ralstonia pseudosolanacearum strain CRMRs218 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

108. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

109. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

110. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

111. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

112. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

113. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

114. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

115. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

116. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

117. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

118. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

119. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

120. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

121. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

122. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

123. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccctattcct	Protospacer
********************** *

124. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 1, identity: 0.958

cgattttggcgacgccctattcat	CRISPR spacer
cgattttggcgacgccccattcat	Protospacer
*****************.******

125. spacer 2.1|1978559|24|NZ_CP052125|PILER-CR matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 3, identity: 0.875

cgattttggcgacgccctattcat	CRISPR spacer
agattttggcgacgccatattctt	Protospacer
 *************** ***** *

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

538954 : 605073

uncultured_Caudovirales_phage(16.67%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019719041.1\|538954_539974_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_020829739.1\|540218_540389_-	hypothetical protein	NA	NA	NA	NA
WP_173940845.1\|540397_543136_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	7.7e-85	32.4
WP_144061944.1\|543138_543462_+	hypothetical protein	NA	NA	NA	NA
WP_019719248.1\|543577_544621_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	8.4e-16	33.3
WP_020829737.1\|544894_546223_-	Nramp family divalent metal transporter	NA	NA	NA	NA
WP_020829735.1\|546388_548173_+	molecular chaperone HscC	F2Y0P3	Organic_Lake_phycodnavirus	3.8e-85	36.6
WP_043898039.1\|548183_550073_+	J domain-containing protein	NA	NA	NA	NA
WP_011003826.1\|550207_550873_+	response regulator	NA	NA	NA	NA
WP_011003827.1\|550869_552348_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	3.3e-18	26.5
WP_016724461.1\|552477_553089_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011003829.1\|553191_553623_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_016724459.1\|553793_554303_+	hypothetical protein	NA	NA	NA	NA
WP_043898037.1\|554411_555767_+	TolC family protein	NA	NA	NA	NA
WP_016724457.1\|556976_560126_+	efflux RND transporter permease subunit	S5VTK5	Leptospira_phage	1.8e-66	24.9
WP_011003834.1\|560122_560446_+	P-II family nitrogen regulator	NA	NA	NA	NA
WP_020829729.1\|560537_562784_-	M1 family metallopeptidase	A0A0P0IY26	Acinetobacter_phage	2.6e-54	27.3
WP_020829727.1\|563445_563886_-	hypothetical protein	NA	NA	NA	NA
WP_043898035.1\|564389_565169_+	metallophosphoesterase	NA	NA	NA	NA
WP_020829725.1\|565321_566233_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	5.3e-75	47.3
WP_028854170.1\|566397_567720_+	MFS transporter	Q6JIH2	Burkholderia_virus	4.6e-104	50.0
WP_086004752.1\|567933_568735_+\|transposase	IS5-like element IS1421 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-27	35.5
WP_043898033.1\|568918_569320_+	hypothetical protein	NA	NA	NA	NA
WP_011003842.1\|569584_570727_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_173940846.1\|570907_581566_+	hemagglutinin repeat-containing protein	A0A2H4J389	uncultured_Caudovirales_phage	4.1e-09	36.8
WP_081263828.1\|581565_582066_+	hypothetical protein	NA	NA	NA	NA
WP_043898032.1\|582096_582597_+	hypothetical protein	NA	NA	NA	NA
WP_081263829.1\|582600_583020_+	hypothetical protein	NA	NA	NA	NA
WP_173940847.1\|583757_584129_+	hypothetical protein	NA	NA	NA	NA
WP_100243798.1\|584348_584534_+	hypothetical protein	NA	NA	NA	NA
WP_144061942.1\|584530_585052_+	hypothetical protein	NA	NA	NA	NA
WP_064047948.1\|585094_586864_+	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_052328822.1\|587536_588904_+	amidohydrolase family protein	NA	NA	NA	NA
WP_016725378.1\|589196_590324_-	nickel/cobalt efflux protein RcnA	NA	NA	NA	NA
WP_011003854.1\|590425_590698_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA
WP_011003855.1\|590830_591802_+	chromate resistance protein	NA	NA	NA	NA
WP_011003856.1\|591820_593026_+	chromate transporter	NA	NA	NA	NA
WP_016725380.1\|593079_593586_+	chromate resistance protein	NA	NA	NA	NA
WP_173877492.1\|593803_594028_-	hypothetical protein	NA	NA	NA	NA
WP_011003864.1\|595202_595760_-	redoxin domain-containing protein	NA	NA	NA	NA
WP_020371953.1\|595749_596793_-	transporter	NA	NA	NA	NA
WP_038938585.1\|596883_597261_-	DUF2946 domain-containing protein	NA	NA	NA	NA
WP_086004752.1\|597651_598453_+\|transposase	IS5-like element IS1421 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-27	35.5
WP_019719041.1\|598826_599846_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_043898030.1\|601068_601509_+	hypothetical protein	NA	NA	NA	NA
WP_064820709.1\|601852_602167_-	transcriptional regulator	NA	NA	NA	NA
WP_020831836.1\|602215_603343_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_081263830.1\|603363_603936_-	mannose-binding lectin protein	NA	NA	NA	NA
WP_016721870.1\|604086_605073_-\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7

DBSCAN-SWA_2

807755 : 829116

Vibrio_phage(33.33%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_019719429.1\|807755_809102_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_043898101.1\|809145_809820_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_011004040.1\|810094_810742_+	hypothetical protein	NA	NA	NA	NA
WP_016724835.1\|810778_811291_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_011004042.1\|811283_812774_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_011004043.1\|812862_813366_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_016724834.1\|813426_813900_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_016726997.1\|813962_815813_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_020371627.1\|815776_816868_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_020830186.1\|816900_819618_+	type VI secretion system ATPase TssH	A0A2I7SAX5	Vibrio_phage	4.5e-85	32.0
WP_020830185.1\|819638_822395_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	2.1e-37	25.6
WP_043898209.1\|822412_823546_+	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_020830182.1\|825830_826655_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_144061949.1\|826717_827167_+	hypothetical protein	NA	NA	NA	NA
WP_173940856.1\|828313_829116_-\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	3.1e-26	35.2

DBSCAN-SWA_3

1022171 : 1056092

Salmonella_phage(20.0%)

transposase,integrase

attL 1014298:1014314|attR 1047625:1047641

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1014298:1014314	attL	NA	NA	NA	NA
WP_086706442.1\|1022171_1023881_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_058908723.1\|1023886_1026871_+\|transposase	Tn3 family transposase	A0A1B0V7H9	Salmonella_phage	2.8e-80	27.5
WP_165591970.1\|1026931_1029154_+	hypothetical protein	NA	NA	NA	NA
WP_072633711.1\|1029384_1029570_-	hypothetical protein	NA	NA	NA	NA
WP_019719551.1\|1029568_1031269_+\|integrase	tyrosine-type recombinase/integrase	A0A2K9VH72	Gordonia_phage	2.6e-06	25.2
WP_029240537.1\|1031488_1031983_-	hypothetical protein	NA	NA	NA	NA
WP_019719553.1\|1032088_1034032_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_020425328.1\|1034051_1034843_-	hypothetical protein	NA	NA	NA	NA
WP_043898203.1\|1034905_1035919_-	S1/P1 nuclease	NA	NA	NA	NA
WP_011004204.1\|1036327_1036711_-	DUF4437 domain-containing protein	NA	NA	NA	NA
WP_080511113.1\|1036814_1037729_-	LLM class oxidoreductase	NA	NA	NA	NA
WP_016723110.1\|1037805_1038474_-	DsbA family protein	NA	NA	NA	NA
WP_011004207.1\|1038576_1039506_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_020830058.1\|1039645_1040839_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_011004209.1\|1040920_1041862_-	transcriptional regulator GcvA	NA	NA	NA	NA
WP_016727628.1\|1042158_1043265_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_043898082.1\|1045641_1046211_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_016723104.1\|1046262_1046925_+	membrane protein	NA	NA	NA	NA
WP_043885814.1\|1047396_1047879_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
1047625:1047641	attR	NA	NA	NA	NA
WP_020829705.1\|1047875_1048229_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_020832173.1\|1048261_1049818_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	7.0e-75	36.6
WP_043898081.1\|1050648_1051608_-	type III effector protein	NA	NA	NA	NA
WP_086004752.1\|1054227_1055030_-\|transposase	IS5-like element IS1421 family transposase	A0A0M5M147	Mycobacterium_phage	3.6e-27	35.5
WP_020829649.1\|1055075_1056092_-\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	2.1e-43	33.9

DBSCAN-SWA_4

1767211 : 1837640

Bacillus_phage(27.27%)

protease,coat,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011004747.1\|1767211_1767733_-\|coat	spore coat U domain-containing protein	NA	NA	NA	NA
WP_016723579.1\|1768235_1768820_-	SCO family protein	NA	NA	NA	NA
WP_020830504.1\|1768816_1769608_-	formylglycine-generating enzyme family protein	NA	NA	NA	NA
WP_020830505.1\|1769627_1771121_-	nitrite reductase, copper-containing	NA	NA	NA	NA
WP_011004751.1\|1771398_1771701_+	DUF2249 domain-containing protein	NA	NA	NA	NA
WP_011004752.1\|1771744_1774015_+	nitric-oxide reductase large subunit	NA	NA	NA	NA
WP_016723583.1\|1774273_1774996_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_011004754.1\|1775054_1775840_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	3.0e-34	38.3
WP_011004755.1\|1775829_1776726_+	ABC transporter permease	NA	NA	NA	NA
WP_020830507.1\|1776773_1777814_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011004757.1\|1777847_1778246_+	DUF488 domain-containing protein	NA	NA	NA	NA
WP_019719870.1\|1778744_1780148_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	2.3e-21	38.6
WP_011004758.1\|1780333_1780552_+	DUF1059 domain-containing protein	NA	NA	NA	NA
WP_020830508.1\|1780659_1781358_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_011004760.1\|1781439_1781877_-	multidrug/biocide efflux PACE transporter	NA	NA	NA	NA
WP_020830509.1\|1781990_1782875_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011004762.1\|1782951_1783344_-	RidA family protein	NA	NA	NA	NA
WP_020830510.1\|1783340_1784312_-	threo-3-hydroxy-L-aspartate ammonia-lyase	NA	NA	NA	NA
WP_020830511.1\|1784308_1784953_-	transcriptional regulator	NA	NA	NA	NA
WP_020371801.1\|1786086_1787997_-	metallophosphoesterase	NA	NA	NA	NA
WP_028854659.1\|1788439_1788976_+	hypothetical protein	NA	NA	NA	NA
WP_020830514.1\|1789083_1790787_+	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	4.9e-13	28.1
WP_064048019.1\|1790795_1791494_-	hypothetical protein	NA	NA	NA	NA
WP_021155598.1\|1791608_1793432_-	virulence factor family protein	NA	NA	NA	NA
WP_064048021.1\|1793428_1796080_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_014632055.1\|1796412_1796601_-	hypothetical protein	NA	NA	NA	NA
WP_043898155.1\|1796946_1798464_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_043898156.1\|1798663_1800373_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_019719859.1\|1800947_1802273_+	DUF3500 domain-containing protein	A0A0H3UCT5	Escherichia_phage	7.4e-09	51.3
WP_020830519.1\|1802298_1803549_+	HupE/UreJ family protein	NA	NA	NA	NA
WP_020830520.1\|1803711_1804209_-	hypothetical protein	NA	NA	NA	NA
WP_020830521.1\|1804582_1805620_+	isopenicillin N synthase family oxygenase	NA	NA	NA	NA
WP_043885670.1\|1805734_1807882_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_016725441.1\|1808496_1808964_-	DUF2846 domain-containing protein	NA	NA	NA	NA
WP_016725440.1\|1808963_1809350_-	hypothetical protein	NA	NA	NA	NA
WP_064048022.1\|1809589_1810429_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA
WP_064048023.1\|1810446_1812198_-	ShlB/FhaC/HecB family hemolysin secretion/activation protein	NA	NA	NA	NA
WP_173940869.1\|1812209_1814750_-	filamentous hemagglutinin N-terminal domain-containing protein	A0A0R6PJK4	Moraxella_phage	4.6e-15	29.0
WP_016721870.1\|1815258_1816245_+\|transposase	IS5 family transposase	E5E3P6	Burkholderia_phage	7.6e-152	81.7
WP_038937983.1\|1816539_1817112_+	DUF4291 domain-containing protein	NA	NA	NA	NA
WP_071653919.1\|1817144_1817621_-	hypothetical protein	NA	NA	NA	NA
WP_016725060.1\|1826272_1826488_+	hypothetical protein	NA	NA	NA	NA
WP_011004794.1\|1826714_1827227_+	DUF1993 family protein	NA	NA	NA	NA
WP_011004795.1\|1827384_1827714_-	hypothetical protein	NA	NA	NA	NA
WP_016725058.1\|1827877_1828399_-	DUF2059 domain-containing protein	NA	NA	NA	NA
WP_011004797.1\|1828495_1828858_-	hypothetical protein	NA	NA	NA	NA
WP_016725057.1\|1829047_1830520_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.6e-25	29.3
WP_019719841.1\|1830682_1831999_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	3.6e-16	25.0
WP_016725055.1\|1832005_1832737_-	response regulator transcription factor	W8CYM9	Bacillus_phage	1.3e-28	35.4
WP_043898158.1\|1832875_1835056_-	hypothetical protein	NA	NA	NA	NA
WP_155738951.1\|1835311_1835461_-	hypothetical protein	NA	NA	NA	NA
WP_016721735.1\|1835457_1836423_-\|transposase	IS5 family transposase	A0A077K814	Ralstonia_phage	1.6e-178	98.1
WP_086005097.1\|1836489_1837640_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	5.9e-95	60.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP052124

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP052125

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection