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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP039707 Lactobacillus paracasei strain Lp02 chromosome, complete genome 1 crisprs cas3,csa3,DinG,csa5gr11,DEDDh,RT 0 0 5 0
NZ_CP039708 Lactobacillus paracasei strain Lp02 plasmid pLp02-1, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP039709 Lactobacillus paracasei strain Lp02 plasmid pLp02-2, complete sequence 0 crisprs NA 0 0 4 0

Results visualization

1. NZ_CP039707
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP039707_1 1182469-1182599 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 486902 : 538061 48 Streptococcus_phage(33.33%) holin,transposase,protease NA
DBSCAN-SWA_2 946427 : 1059753 102 Lactobacillus_phage(42.42%) holin,integrase,transposase attL 946408:946467|attR 994730:995780
DBSCAN-SWA_3 1347858 : 1389117 48 Lactobacillus_phage(95.24%) head,portal,tail,integrase,holin,tRNA,protease,terminase attL 1333777:1333791|attR 1382452:1382466
DBSCAN-SWA_4 1502601 : 1556994 57 Staphylococcus_phage(25.0%) head,portal,capsid,integrase,tRNA,terminase attL 1515204:1515220|attR 1560156:1560172
DBSCAN-SWA_5 2825041 : 2904735 76 Bacillus_phage(26.67%) bacteriocin,transposase,tRNA,protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP039709
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 8565 8 Shigella_phage(20.0%) transposase NA
DBSCAN-SWA_2 11773 : 14549 2 Streptococcus_phage(50.0%) transposase NA
DBSCAN-SWA_3 34616 : 35779 1 Acinetobacter_phage(100.0%) transposase NA
DBSCAN-SWA_4 43046 : 46052 4 Enterococcus_phage(50.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage