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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP054422 Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 chromosome, complete genome 3 crisprs DEDDh,RT,DinG,cas3,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL 0 7 2 0
NZ_CP054423 Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) strain 14-SA00836-0 plasmid p14-SA00836-0, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP054422
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054422_1 1024639-1024812 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054422_2 1624582-1624684 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054422_3 3766962-3767783 TypeI-E I-E
13 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP034699 Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence 179828-179859 0 1.0
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP034710 Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence 65262-65293 0 1.0
NZ_CP054422_3 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767540-3767571 32 KT630649 Salmonella phage SEN34, complete genome 21942-21973 0 1.0
NZ_CP054422_3 3.11|3767601|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767601-3767632 32 KT630649 Salmonella phage SEN34, complete genome 5481-5512 0 1.0
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 AGRM01000007 Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence 8907-8938 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP029990 Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence 7530-7561 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP030197 Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence 87602-87633 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP030218 Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence 20285-20316 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP030177 Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence 72336-72367 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP025255 Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence 54912-54943 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 CP053415 Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence 90385-90416 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 CP053327 Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence 98707-98738 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP030289 Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence 61911-61942 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP033339 Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence 84558-84589 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP024167 Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence 31273-31304 4 0.875
NZ_CP054422_3 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767052-3767083 32 NZ_CP022118 Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence 35777-35808 4 0.875
NZ_CP054422_3 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT 3766991-3767022 32 MH588547 Caulobacter phage CcrSC, complete genome 101522-101553 7 0.781
NZ_CP054422_3 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT 3766991-3767022 32 NC_048047 Caulobacter phage CcrBL9, complete genome 102162-102193 7 0.781
NZ_CP054422_3 3.3|3767113|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767113-3767144 32 NZ_CP034366 Pantoea sp. CCBC3-3-1 plasmid unnamed3, complete sequence 19524-19555 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 NZ_CP020372 Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence 299364-299395 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 44895-44926 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 67245-67276 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 67581-67612 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 67917-67948 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 68253-68284 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 CP043735 Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence 68589-68620 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 NZ_CP047660 Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence 6788-6819 7 0.781
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 NZ_CP047660 Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence 32625-32656 7 0.781
NZ_CP054422_3 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT 3766991-3767022 32 NZ_CP049252 Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence 5757-5788 9 0.719
NZ_CP054422_3 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT 3766991-3767022 32 HQ110084 Erwinia phage ENT90, complete genome 27362-27393 9 0.719
NZ_CP054422_3 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767296-3767327 32 NC_014824 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence 149645-149676 9 0.719
NZ_CP054422_3 3.8|3767418|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767418-3767449 32 NZ_KX426231 Acinetobacter lwoffii strain EK30A plasmid pALWEK1.5, complete sequence 856-887 9 0.719
NZ_CP054422_3 3.8|3767418|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767418-3767449 32 NZ_CP053911 Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence 49870-49901 9 0.719
NZ_CP054422_3 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767540-3767571 32 NC_012520 Rhodococcus opacus B4 plasmid pROB01, complete sequence 394514-394545 9 0.719
NZ_CP054422_3 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767540-3767571 32 AP014335 Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C6, *** SEQUENCING IN PROGRESS *** 23647-23678 9 0.719
NZ_CP054422_3 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR 3767540-3767571 32 LR214966 Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12 35654-35685 10 0.688

1. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034699 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE40 plasmid pRSE40, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagcgagcgcaaa	Protospacer
********************************

2. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034710 (Salmonella enterica subsp. enterica serovar Karamoja strain RSE21 plasmid pRSE21, complete sequence) position: , mismatch: 0, identity: 1.0

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagcgagcgcaaa	Protospacer
********************************

3. spacer 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 0, identity: 1.0

ttttctgcatacatagtcgcattatttgtaat	CRISPR spacer
ttttctgcatacatagtcgcattatttgtaat	Protospacer
********************************

4. spacer 3.11|3767601|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 0, identity: 1.0

tgcatcgcccgtggtgctgcgggtgtttctcc	CRISPR spacer
tgcatcgcccgtggtgctgcgggtgtttctcc	Protospacer
********************************

5. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to AGRM01000007 (Salmonella enterica subsp. houtenae str. ATCC BAA-1581 plasmid pSEHO0A2, complete sequence, whole genome shotgun sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

6. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029990 (Salmonella enterica subsp. diarizonae serovar 48:i:z strain SA20121591 plasmid pSA20121591.1, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

7. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030197 (Salmonella enterica strain SA20051401 plasmid pSA20051401.1, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

8. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030218 (Salmonella enterica strain SA20075157 plasmid pSA20075157.1, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

9. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030177 (Salmonella enterica subsp. enterica serovar Milwaukee str. SA19950795 plasmid pIncFII.2, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

10. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025255 (Salmonella enterica subsp. enterica serovar Newport str. CDC 2010K-2159 plasmid pSNE1-2010K-2159, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

11. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP053415 (Salmonella enterica strain 2011K-0868 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

12. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP053327 (Salmonella enterica subsp. salamae serovar 58:c:z6 strain 2013K-0366 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

13. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030289 (Salmonella enterica subsp. enterica serovar Gaminara str. SA20063285 plasmid pIncI1.1, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

14. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033339 (Salmonella enterica subsp. enterica serovar Anatum strain CFSAN076215 plasmid pCFSAN076215, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

15. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024167 (Salmonella enterica subsp. enterica serovar Gaminara strain CFSAN070644 plasmid pCFSAN024441_02, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagggcgta	Protospacer
*********************** ** **. *

16. spacer 3.2|3767052|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022118 (Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.875

gcgtagaagctgttgacgtcagcgagcgcaaa	CRISPR spacer
gcgtagaagctgttgacgtcagccagaacgaa	Protospacer
*********************** ** .*.**

17. spacer 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT matches to MH588547 (Caulobacter phage CcrSC, complete genome) position: , mismatch: 7, identity: 0.781

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
gcaggcagcatcttcagcagcctgaccggcgg	Protospacer
*   .***.* *******************.*

18. spacer 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT matches to NC_048047 (Caulobacter phage CcrBL9, complete genome) position: , mismatch: 7, identity: 0.781

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
gcgggcagcatcttcagcagcctgaccggcgg	Protospacer
*   .***.* *******************.*

19. spacer 3.3|3767113|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP034366 (Pantoea sp. CCBC3-3-1 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.781

gtattatagcgggtaattgaggagaaaatcat	CRISPR spacer
gaacaaaagcgggcaattgaggagcaaatcaa	Protospacer
* *. * ******.********** ****** 

20. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020372 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs485, complete sequence) position: , mismatch: 7, identity: 0.781

tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cggaacagggtgcgaagctgggcggcggtata	Protospacer
.  * ******.********.********* *

21. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

22. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

23. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

24. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

25. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

26. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to CP043735 (Escherichia coli strain CVM N17EC1164 plasmid pN17EC1164-2, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

27. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047660 (Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

28. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047660 (Escherichia coli strain LD39-1 plasmid pLD39-1-134kb, complete sequence) position: , mismatch: 7, identity: 0.781

--tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
cagccacc--ggtacaaaactgagcggcggtaac	Protospacer
   *.***  *****.**.************** 

29. spacer 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT matches to NZ_CP049252 (Rhizobium rhizoryzae strain DSM 29514 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.719

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
accttcgagaacttcagcatcctgaccgacag	Protospacer
. *. *.. ********** ********.***

30. spacer 3.1|3766991|32|NZ_CP054422|CRISPRCasFinder,CRT matches to HQ110084 (Erwinia phage ENT90, complete genome) position: , mismatch: 9, identity: 0.719

gaccacagtaacttcagcagcctgaccggcag	CRISPR spacer
aaaggaataaacttccgcagcctgaccgacag	Protospacer
.*  . *  ****** ************.***

31. spacer 3.6|3767296|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 9, identity: 0.719

tctaccagggtacgaagctgagcggcggtaaa	CRISPR spacer
gccgtcagggtacgaacctgaacggcggtttt	Protospacer
 *...*********** ****.*******   

32. spacer 3.8|3767418|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KX426231 (Acinetobacter lwoffii strain EK30A plasmid pALWEK1.5, complete sequence) position: , mismatch: 9, identity: 0.719

accaatacccagaacaatacctatcaacgcgc	CRISPR spacer
cacaatacccagaacaatatctttcaattttg	Protospacer
  *****************.** ****. .  

33. spacer 3.8|3767418|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053911 (Hymenobacter sp. BRD128 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

accaatacccagaacaatacctatcaacgcgc	CRISPR spacer
tccaatccccagaacattacctatggcaaccc	Protospacer
 ***** ********* ******* .  .* *

34. spacer 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 9, identity: 0.719

ttttctgcatacatagtcgcattatttgtaat	CRISPR spacer
atatgcagatacatagtcgcatagtttgtaaa	Protospacer
 * * .. ************** .******* 

35. spacer 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to AP014335 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-U-MedDCM-OCT-S36-C6, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 9, identity: 0.719

ttttctgcatacatagtcgcattatttgtaat	CRISPR spacer
atcgatacatttatagtcgcattatttgtacc	Protospacer
 *.  *.*** .****************** .

36. spacer 3.10|3767540|32|NZ_CP054422|CRISPRCasFinder,CRT,PILER-CR matches to LR214966 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 12) position: , mismatch: 10, identity: 0.688

ttttctgcatacatagtcgcattatttgtaat	CRISPR spacer
aaaattgcatacattgtcacattatttgactt	Protospacer
    .********* ***.*********   *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1959150 : 2009646 66 Escherichia_phage(76.79%) holin,integrase,terminase,transposase,tail,plate attL 1954058:1954073|attR 1964859:1964874
DBSCAN-SWA_2 2016564 : 2022168 8 Enterobacteria_phage(33.33%) holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage