CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP054478	Bacillus amyloliquefaciens strain R8-25 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP054479	Bacillus amyloliquefaciens strain R8-25 chromosome, complete genome	1 crisprs	csa3,RT,cas3,DEDDh,DinG,casR	2	4	8	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054479_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054479_1

3419159-3421206

Orphan

Consensus_repeat	Method
CCNGTTNCTCCNGTTNCTCCNGTNNCTCCNGT	CRT

30 spacers

DinG

The CRISPR arrays of NZ_CP054479_1

>merge|NZ_CP054479|1|3419159-3421206|CRT
CCGGTTACTCCGGTTACCCCGGTTGCTCCAGTGGCGCCGGTTACTCCGGTGGCTCCCGTTATCCCGGTTGCTCCGGTTACTCCCGTTACTCCCGTTACTCCGGTCGCTCCAGTATCTCCGGTTACTCCTGTTACTCCGGTCGCCCCGGTTACACCGGTCGAGCCTGTTTCTCCGGTCGAGCCCGTTACTCCGGTGGCTCCCGTTGCCCCAGTCGCTCCTGTATCTCCGGTTACTCCCGTTACCCCGGTTGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCAGTAGCTCCGGTTACCCCGGTTGCTCCGGTTACTCCGGTGGCGCCTGTTATTCCTGTCGCTCCTGTATCTCCGGTTACTCCCGTTACTCCGGTTTCTCCAGTGGCTCCGGTGGCCCCTGTTACTCCGGTGGCCCCTGTTACTCCGGTTACCCCGGTTACTCCAGTTGATCCCGTTACTCCGGTGGCTCCAGTAGCTCCGGTTACCCCGGTTACCCCGGTTGATCCCGTTACTCCGGTCGCTCCTGTTGATCCAGTATCCCCGGTTACTCCCGTTACTCCAGTTGCGCCTGTTACCCCAGTTGCCCCCGTTACCCCGATGGCACCGGTTAATCCAGTTGCTCCGGTTATCCCCGTGGCTCCCGTTACTCCGGTTGCGCCGGTGAGCCCGGTTGCTCCTGTTACTCCAGTATCCCCGGTTACACCGGTAGCACCTGTTACTCCGGTAGCACCTGTTACTCCGGTTACTCCCGTTACTCCAGTGGCTTCCGTTGCCCCAGTCGCTCCAGTAGCTCCGGTTACTCCCGTTATCCCGGTTGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCAGTAGCTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTTACTCCGGTCGCTCCAGTAGCTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTTACTCCGGTCGCTCCAGTATCTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTTACTCCGGTCGCCCCGGTTACACCGGTCGAGCCCGTTACTCCGGTTGCTCCGGTTTCTCCCGTTATCCCGGTTGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCGGTTACTCCCGTTACTCCCGTTACCCCGGTTGCTCCGGTGAGCCCGGTTGCTCCGGTTACTCCAGTATCCCCGGTTACACCGGTAGCACCTGTTACTCCGGTAGCACCTGTTACTCCGGTTACTCCCGTTACTCCAGTGGCTCCCGTTGCCCCAGTCGCTCCAGTAGCTCCGGTTACTCCCGTTATCCCGGTTGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCAGTATCTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTTACTCCGGTCGCTCCAGTATTTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTTACTCCCGTTACTCCGGTCGCTCCAGTATCTCCGGTTACCCCGGTTGCTCCGGTTACTCCCGTTACTCCGGTCGCCCCGGTTACACCGGTCGAGCCCGTTACTCCGGTTGCTCCGGTTTCTCCCGTTATCCCGGTTGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCAGTAGCTCCGGTTACACCGGTTGCTCCGGTTTCTCCCGTTACTCCGGTCGCTCCAGTAGCTCCGGTTACACCGGTTGCTCCGGTTTCTCCCGTTATTCCGGTCGCTCCAGTATTTCCGGTTACACCGGTTGCTCCGGTTACTCCCGTGGCTCCTGTCACTCCAGTGGCGCCGGTTATTCCAGTCGCGCCGGTTTCTCCGGTTGCTCCCGTTACTCCCGTGGCGCCGGTTATTCCAGTCGCGCCGGGATCTCCAGTGACGCCGGTTGCTCCCGTGGCACCGGTTACCCCAGTCGCTCCGGTATTCCCGGTCGAGCCCGTAGCTCCGGTGAATCCCGTTGCCCCGGTAAACCCCGTTGCTCCAGTGAATCCCGTTGCTCCAGTGAATCCCGTTGCTCCAGTGAACCCCGTTGCTCCAGTCAGCCCGGTTGCTCCGGTCAGCCCCGTTGCTCCGGTGCACCCCGT

>NZ_CP054479|1|1|3419159-3421206|CRT
CCGGTTACTCCGGTTACCCCGGTTGCTCCAGT	GGCGCCGGTTACTCCGGTGGCTCCCGTTATCCCGGTTGCTCCGGTTACT
CCCGTTACTCCCGTTACTCCGGTCGCTCCAGT	ATCTCCGGTTACTCCTGTTACTCCGGTCGCCCCGGTTACACCGGTCGAGCCTGTTTCTCCGGTCGAG
CCCGTTACTCCGGTGGCTCCCGTTGCCCCAGT	CGCTCCTGTATCTCCGGTTACTCCCGTTACCCCGGTTGCTCCAGTTGAT
CCCGTTATTCCGGTCGCTCCAGTAGCTCCGGT	TACCCCGGTTGCTCCGGTTACTCCGGTGGCGCCTGTTATTCCTGTCGCTCCTGTATCTCCGGTTACT
CCCGTTACTCCGGTTTCTCCAGTGGCTCCGGT	GGCCCCTGTTACTCCGGTGGCCCCTGTTACTCCGGTTACCCCGGTTACTCCAGTTGAT
CCCGTTACTCCGGTGGCTCCAGTAGCTCCGGT	TACCCCGGTTACCCCGGTTGAT
CCCGTTACTCCGGTCGCTCCTGTTGATCCAGT	ATCCCCGGTTACTCCCGTTACTCCAGTTGCGCCTGTTACCCCAGTTGCC
CCCGTTACCCCGATGGCACCGGTTAATCCAGT	TGCTCCGGTTATCCCCGTGGCTCCCGTTACTCCGGTTGCG
CCGGTGAGCCCGGTTGCTCCTGTTACTCCAGT	ATCCCCGGTTACACCGGTAGCACCTGTTACTCCGGTAGCA
CCTGTTACTCCGGTTACTCCCGTTACTCCAGT	GGCTTCCGTTGCCCCAGTCGCT
CCAGTAGCTCCGGTTACTCCCGTTATCCCGGT	TGCTCCAGTTGATCCCGTTATTCCGGTCGCTCCAGTAGCTCCGGTTACA
CCGGTTGCTCCGGTTACTCCCGTTACTCCGGT	CGCTCCAGTAGCTCCGGTTACA
CCGGTTGCTCCGGTTACTCCCGTTACTCCGGT	CGCTCCAGTATCTCCGGTTACA
CCGGTTGCTCCGGTTACTCCCGTTACTCCGGT	CGCCCCGGTTACACCGGTCGAGCCCGTTACT
CCGGTTGCTCCGGTTTCTCCCGTTATCCCGGT	TGCTCCAGTTGATCCCGTTATT
CCGGTCGCTCCGGTTACTCCCGTTACTCCCGT	TACCCCGGTTGCTCCGGTGAGC
CCGGTTGCTCCGGTTACTCCAGTATCCCCGGT	TACACCGGTAGCACCTGTTACTCCGGTAGCACCTGTTACT
CCGGTTACTCCCGTTACTCCAGTGGCTCCCGT	TGCCCCAGTCGCTCCAGTAGCT
CCGGTTACTCCCGTTATCCCGGTTGCTCCAGT	TGATCCCGTTATTCCGGTCGCTCCAGTATCTCCGGTTACACCGGTTGCT
CCGGTTACTCCCGTTACTCCGGTCGCTCCAGT	ATTTCCGGTTACACCGGTTGCTCCGGTTACT
CCCGTTACTCCCGTTACTCCGGTCGCTCCAGT	ATCTCCGGTTACCCCGGTTGCT
CCGGTTACTCCCGTTACTCCGGTCGCCCCGGT	TACACCGGTCGAGCCCGTTACTCCGGTTGCT
CCGGTTTCTCCCGTTATCCCGGTTGCTCCAGT	TGATCCCGTTATTCCGGTCGCTCCAGTAGCTCCGGTTACACCGGTTGCT
CCGGTTTCTCCCGTTACTCCGGTCGCTCCAGT	AGCTCCGGTTACACCGGTTGCT
CCGGTTTCTCCCGTTATTCCGGTCGCTCCAGT	ATTTCCGGTTACACCGGTTGCT
CCGGTTACTCCCGTGGCTCCTGTCACTCCAGT	GGCGCCGGTTATTCCAGTCGCGCCGGTTTCTCCGGTTGCT
CCCGTTACTCCCGTGGCGCCGGTTATTCCAGT	CGCGCCGGGATCTCCAGTGACG
CCGGTTGCTCCCGTGGCACCGGTTACCCCAGT	CGCTCCGGTATTCCCGGTCGAGCCCGTAGCT
CCGGTGAATCCCGTTGCCCCGGTAAACCCCGT	TGCTCCAGTGAATCCCGTTGCT
CCAGTGAATCCCGTTGCTCCAGTGAACCCCGT	TGCTCCAGTCAGCCCGGTTGCT
CCGGTCAGCCCCGTTGCTCCGGTGCACCCCGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054479.1\|WP_007610021.1\|3404731_3405412_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP054479.1\|WP_053285235.1\|3435905_3437462_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223562
NZ_CP054479.1\|WP_014417176.1\|3401419_3402214_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293807
NZ_CP054479.1\|WP_174532661.1\|3408016_3413923_-\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|227268
NZ_CP054479.1\|WP_174532663.1\|3415358_3418448_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP054479.1\|WP_003155650.1\|3431996_3432344_-\|general-stress-protein	unknown	unknown	gnl\|CDD\|378584
NZ_CP054479.1\|WP_007408959.1\|3437505_3438690_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341027
NZ_CP054479.1\|WP_174532761.1\|3428201_3428900_-\|collagen-like-protein	unknown	unknown	gnl\|CDD\|189968
NZ_CP054479.1\|WP_021495144.1\|3434603_3435734_-\|DEAD/DEAH-box-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|223587
NZ_CP054479.1\|WP_029974074.1\|3407255_3407909_-\|class-A-sortase	unknown	unknown	gnl\|CDD\|320680
NZ_CP054479.1\|WP_174532662.1\|3414103_3415180_-\|response-regulator	unknown	unknown	gnl\|CDD\|226456
NZ_CP054479.1\|WP_061861957.1\|3403756_3404719_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|225722
NZ_CP054479.1\|WP_021495142.1\|3433013_3434033_+\|NADP-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|176190
NZ_CP054479.1\|WP_014417175.1\|3402265_3403564_-\|citrate-transporter	unknown	unknown	gnl\|CDD\|162036
NZ_CP054479.1\|WP_007610002.1\|3432535_3432886_+\|DUF3212-family-protein	unknown	unknown	gnl\|CDD\|288356
NZ_CP054479.1\|WP_007408966.1\|3429006_3430443_-\|anion-permease	unknown	unknown	gnl\|CDD\|279307
NZ_CP054479.1\|WP_061890486.1\|3400204_3401296_-\|nitric-oxide-synthase-oxygenase	unknown	unknown	gnl\|CDD\|376957
NZ_CP054479.1\|WP_174532665.1\|3421622_3428087_-\|NTTRR-F1-domain	unknown	unknown	gnl\|CDD\|237537
NZ_CP054479.1\|WP_094296476.1\|3405408_3407013_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP054479.1\|WP_094296470.1\|3430567_3431833_-\|pectate-lyase	unknown	unknown	gnl\|CDD\|226384

Protein	Function_ID	Function_description	E-value
NZ_CP054479.1\|WP_007610021.1\|3404731_3405412_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	7.42185e-91
NZ_CP054479.1\|WP_053285235.1\|3435905_3437462_+\|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP054479.1\|WP_014417176.1\|3401419_3402214_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293807	cd07721, yflN-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis yflN; MBL-fold metallo hydrolase domain. This subgroup includes the uncharacterized Bacillus subtilis yflN protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	3.03278e-77
NZ_CP054479.1\|WP_174532661.1\|3408016_3413923_-\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|227268	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP054479.1\|WP_174532663.1\|3415358_3418448_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	4.47104e-61
NZ_CP054479.1\|WP_003155650.1\|3431996_3432344_-\|general-stress-protein	gnl\|CDD\|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	1.36131e-33
NZ_CP054479.1\|WP_007408959.1\|3437505_3438690_-\|MFS-transporter	gnl\|CDD\|341027	cd17474, MFS_YfmO_like, Bacillus subtilis multidrug efflux protein YfmO and similar transporters of the Major Facilitator Superfamily. This family is composed of Bacillus subtilis multidrug efflux protein YfmO, bacillibactin exporter YmfD/YmfE, uncharacterized MFS-type transporter YvmA, and similar proteins. YfmO acts to efflux copper or a copper complex, and could contribute to copper resistance. YmfD/YmfE is involved in secretion of bacillibactin. The YfmO-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.82425e-93
NZ_CP054479.1\|WP_174532761.1\|3428201_3428900_-\|collagen-like-protein	gnl\|CDD\|189968	pfam01391, Collagen, Collagen triple helix repeat (20 copies). Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.	5.30815e-09
NZ_CP054479.1\|WP_021495144.1\|3434603_3435734_-\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.34236e-108
NZ_CP054479.1\|WP_029974074.1\|3407255_3407909_-\|class-A-sortase	gnl\|CDD\|320680	cd06165, Sortase_A, Sortase domain found in class A sortases. Class A sortases are membrane-bound cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). They perform a housekeeping role in the cell as members of this group are capable of anchoring a large number of functionally distinct surface proteins containing a cell wall sorting signal to an amino group located on the bacterial cell wall. They do so by catalyzing a transpeptidation reaction in which the surface protein substrate is cleaved at a conserved cell wall-sorting signal (Class A sortases recognize a canonical LPXTG motif, X can be any amino acid), and covalently linked to peptidoglycan for display on the bacterial surface. The prototypical sortase A protein from Staphylococcus aureus (named Sa-SrtA) cleaves the amide bond between threonine and glycine residues of the canonical LPXTG motif in a wide range of protein substrates with diverse functions that can promote bacterial adhesion, nutrient acquisition, host cell invasion, and immune evasion. Next, it catalyzes a transpeptidation reaction by which the proteins are covalently linked to the peptidoglycan precursor lipid II. SrtA is therefore affects the ability of a pathogen to establish successful infection. SrtA contains an N-terminal hydrophobic segment, a linker region and an extra-cellular C-terminal catalytic domain. The hydrophobic segment functions as both a signal peptide for secretion and a stop-transfer signal for membrane anchoring. The catalytic domain contains the catalytic TLXTC signature sequence where X is usually a valine, isoleucine or a threonine. The gene encoding SrtA is generally not located in the same gene cluster as its substrates while the gene encoding SrtB is usually clustered in the same locus as its substrate.	7.29352e-55
NZ_CP054479.1\|WP_174532662.1\|3414103_3415180_-\|response-regulator	gnl\|CDD\|226456	COG3947, COG3947, Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms].	3.75813e-66
NZ_CP054479.1\|WP_061861957.1\|3403756_3404719_-\|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl\|CDD\|225722	COG3181, COG3181, Uncharacterized protein conserved in bacteria [Function unknown].	2.03828e-82
NZ_CP054479.1\|WP_021495142.1\|3433013_3434033_+\|NADP-dependent-oxidoreductase	gnl\|CDD\|176190	cd05288, PGDH, Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.	0
NZ_CP054479.1\|WP_014417175.1\|3402265_3403564_-\|citrate-transporter	gnl\|CDD\|162036	TIGR00784, Mg2+/citrate_complex_secondary_transporter, citrate transporter, CitMHS family. This family includes two characterized citrate/proton symporters from Bacillus subtilis. CitM transports citrate complexed to Mg2+, while the CitH apparently transports citrate without Mg2+. The family also includes uncharacterized transporters, including a third paralog in Bacillus subtilis. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	0
NZ_CP054479.1\|WP_007610002.1\|3432535_3432886_+\|DUF3212-family-protein	gnl\|CDD\|288356	pfam11486, DUF3212, Protein of unknown function (DUF3212). Members in this family of proteins are annotated as YfmB however currently no function for this protein is known.	2.69947e-47
NZ_CP054479.1\|WP_007408966.1\|3429006_3430443_-\|anion-permease	gnl\|CDD\|279307	pfam00939, Na_sulph_symp, Sodium:sulfate symporter transmembrane region. There are also some members in this family that do not match the Prosite motif, and belong to the subfamily SODIT1.	0
NZ_CP054479.1\|WP_061890486.1\|3400204_3401296_-\|nitric-oxide-synthase-oxygenase	gnl\|CDD\|376957	pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain.	0
NZ_CP054479.1\|WP_174532665.1\|3421622_3428087_-\|NTTRR-F1-domain	gnl\|CDD\|237537	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional.	7.35826e-08
NZ_CP054479.1\|WP_094296476.1\|3405408_3407013_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	1.01073e-157
NZ_CP054479.1\|WP_094296470.1\|3430567_3431833_-\|pectate-lyase	gnl\|CDD\|226384	COG3866, PelB, Pectate lyase [Carbohydrate transport and metabolism].	3.57001e-90

>NZ_CP054479.1|WP_174532663.1|3415358_3418448_+|response-regulator
MKEKFISISIICGYAAFFMIFMAMDHFSGSSLPQAEQGVINLEKWDFQKDGNVQLNGKWILYPNQMLSPQALHSAKGKNPVLVDVPVNVKLFGKTADVDYGTYKLTIRSNEDNQVLGISTSFIYSSNRLYLNGKVIGQSGNPSEKADFKAQNKPYSSFFTLRKGDNELVLHFSNFGKVPGWGIAKPITFGTQEQIIRENQISFFNDSIMITAFFITGLYFLGFFLQRTKDKHLLFFSVMCLLFSAIILMIGKERIIFLLFPSISFSLLNSLRIISTVLVSMAVFLYLFYAYREIVSKTTITFLTALSGIILITDFMSGSFIDHLSYILHSVLAVTTLFYITYIFTIAAIRKIKGSTYLTLASVSMSAFVILTTISAYSGKTAFSFNSIYSLPTVIALLAVVLLMAQQFAGAFRDNEVLSRKLVKIDQLKDEFIAKTSHEFKTPLNSIINICQTLVAGRKKKTIEEEKENMQLIIRMGYRLSDLVNDILDLEKMKQGMLQIRPVPVDVHAVICSEMNFYRLLSKHKKLAILNHVPDDLPLVLADENRFRQILTNLVENAIKYTSEGNIILSAESLNDKMIQITVADTGSGIPEADLETIFDSFQQAEGTEEDGTGLGLSIVKQLVKLQNGDIWAESAAAQGSAFHFTLPAAQIDSLPEAKTELPKSQPGQRMPDISLVTPYHSEKIEAPTILIVDDKIESLKILTDMLEGVPYNVIAVKSGKEALQAVSSSKLDLVILDLMMPDMTGFEVCTIIRERFSMVDLPVLIVTAAIISHDKYKAFHAGANDILQKPYHYSEFTARIKNLILMKHTAHQATNLEMAFLQSQIKPHFLYNVLNTIIALSHLDIEKARETTAAFTNYLRMSFDFQNTSDISSFRNELSIITSYLSIEKTRFGKRLDISFDIEQDIDFPLPPLMIQPLVENAVHHGISKKRGGGRIKLTAKKQGENTYLIKVEDNGTGIMPDIQKDILSSDVNRSVGLKNINRRLKHFCGSELTITSTPDEGTAVSMMIHTPGTTDDSNSLKTSSLRY
>NZ_CP054479.1|WP_174532662.1|3414103_3415180_-|response-regulator
MKALIVDDEELALLHFNRMLERTNAFQSIITFQDPAEVLEHSELSAADAVFLDIEMPGINGIELAESIQELNEHIQVIFITAYNEFAIKAFELNAVDYLLKPVDNARLLTTVERIRMNKKLRTADENTGTDYVIQCFGNLDFYQSVNGVKTYITVKWRTSKARELYAFLLLNQGRTVSKDMLMEMFWPAYDVSKASTQLYSTIYQIRKLIGQLPFSQSIENTDIGYILRLSGVKVDTVGWEKTLKEAPPLSAAALTRHMDIVMSYENHYLMENGYLWAEPEKARLAHLWLSKAYELIGLLIQEKNDHQAMDVCLQVEKIEPGDDKIIQYKLQLFNKLGKVEEAIKEYERYKQLKDKIN
>NZ_CP054479.1|WP_174532661.1|3408016_3413923_-|LPXTG-cell-wall-anchor-domain-containing-protein
MGVRNFSFSPKKSKRLRPALISCFTLFFIFSQVVSFTPIAAASGSQQSESGFFDSVTVKDGRQQTVDGSKGSEPALAPGDKVTLTYEWSLKNKEDASDRNITIKIPESFTLDNDAEGELTSADRVIGIYKAEAKSSTLEVKVNDAGADAGDAKGSIALSAKFTPDITDETKMAKALFQLDAGKTQQVLIPVKKDETTDSDTEKNTSSTPAEPQEKTEKKSASADGGDKAEQTTKSKPSAKRSQSKMVITSKSAAKSLPGGSRITQNILTDVKLTDEKGKPYDKNNPANTNSPANITIQWAIPNELGKTINDGDRYEFDLPKEFIMHNDITNQPLTDGDSTYGTFSINTSGHVIMTFNGEVKEDSNVKGSLYVNTQFNQKEIKGSTTQKIKFPVNSDTPDVTVYFKPNVNKTIEKSGSLDKGINPGKVTWTVDLNKKEEEVKHAKLTESLPDELTFRSVKVYELDVNIDGSVSQGNEITSGYTVGENGSVTFAGTIDSAYRLIYDTEIKDAAKPGKGGKITLTNKAAFSGDNAEPISAEASVTAGYGKMIEKSSTGYKGESQTFSWAVMYNYGEKKIDQSKAGIKDTFGSDDLHLVPGSLKVLPITFSQNGSEQEGAPLKEGEDYTLTDNGNGFEIKFKQSVTGAYKIIYQSQVNDGVIIDSPVKYTNTAVTDTGESKETPGTAIQQNLIKHYSNADYEKKTVDWTITVNKNGYTMKDWTLDDQFTSGGLALIDDSFHMQDTTDNKTLKEGTDYTLTKKPGNQGFTIALIGDYAETNSQFKITYTTKFNADFSNEPIKNTAESTWTDKNGGKRTNKESSGFTPNNQTSHNGFKNGSYNAVSKEITWKVGINYNGEPSKNPYIKDTITDGQQFLHGSVAVKTYTISKNGSITEGESLDSSKYEIEEPSDGNKNTLIVRLKTDDALPYLIEFKTSLKGQVIKQNQYTNKAEYFNNDHADRTLTGSVSIANGGNLISKGGKQNGNNIDWNINVNASQSTLDDVKVKDTPDENQIIDEDSFKVYQAKYNENGVMKDSSGNLIPGDVKLEKDKDYKLDIKTDNATGEQSFVLTFTGSYKQIDRAYVIQYRSLINISGSSGQVSNKVSITGTNVEEQTQENNSSVFVAISSGGGSGSGEKGSLTISKTGSDGTSLSGAGFQLWSKDGKQLLRTGTTDDAGKLVFGNIRYGTYVLKEIKAPDGYTISDAYVNGVSVTIDGKSSAAGALYKVINQKNKVTLIKKDENNNPLAGAVFKLEKKSSDGTYTLIKNNIESDKNGKVEINGLPAGYYRLMETKAPSGFIVNTKAIHFSIAKNEKNQVPDVELGSMVNYKGKAALTKKDEDGLNLEGAVFKIIDSDGKTVQEDLVSEKDGKIETSGLAPGHYAFIETKAPDGYVLNTEKVEFTISETAEGKPESTDAGTAVNYKGSVQLTKEDADGRNLEGAVFKIVDSDGNTVQEDLVSNKDGKVETSGLAPGHYAFIETKAPDGYVLNTEKKEFTISETAEGKPESTDAGTAVNYKGSVRLTKEDAEGKKLEGAVFKIVGSDGKTVKEDLVSNKDGKVETSGLAPGHYAFIETKAPDGYVLNTEKKEFTISETAEGKPKPSEAGTFVNYQGSVQLIKKDQDGNVLDGAVFKIIDSDGKTVRDDLMTKEGGKIDAGGLAPGNYQFVETKAPDGYLLSTTPVPFTIKAENSGKPNQAALTAVNIKNSVVLTKLDQGDKRKVLQGAKFNLTDANGKVLTEGLTTDEHGQIIVRGLKAGEYQFIETKAPELYSLDQTPISFKITNTDIKPVEISAENTLTPGDVTLTKVDHDDKNKVLEGAEFKITDSSGHPVNTGGSKERPAVWKTDQKGRFTVKGLAPGQYQFIETKAPDGYQLNEKPIEFTIEKGQSKAVEVVVSNKKLKNPAPGKDTPNHQTNQGGHHPDTNGKTNHSDTGKNLPKTGDTAGMMPVTAGILLLLAGGAAAVVSRKKKARNR
>NZ_CP054479.1|WP_029974074.1|3407255_3407909_-|class-A-sortase
MVKKMIIAVLILSGLLLISSPLMKGCLIAYLSKSQIETELTAEQARKNNMKKADYDFESIHPPGFSETVQSSFNRKPKPIIGRITISSIDLDLPILKGTTNENLLIGAATMRPDQKMGEGNYPLAGHHLKQKNLLFGPLLHIKKGAQIVMTDFRKDYIYSVTSKTMISEIEANTIQETKDKEITLITCDKAVRTEGRLAVKGKLIDISGHSNVSRPS
>NZ_CP054479.1|WP_094296476.1|3405408_3407013_-|sensor-histidine-kinase
MLEAKRFYVSLQMKIAGLITALLILVIGTLTVIFAFQQLKEGQKQAEQLAVQTAKTISYMPPVKEAFRLADQEAFTKLDVIEQMKEQAGAHAVYITDQKGHVAFHSARSSIPKENQNLQNKTVMFGGSPVSDGMKSVRGSAPVILEEKNHNEVVGTVTVEFLQDEIEKDMKAHLRHLGYFACLVFLIGIGGAAALAKSIRKDTLGLEPHEIAALYRERNAMLLAMKEGIIAVNKEGAVTMMNLSAADMLNLPAPMIGRHIKEIMPGAKLMPVLAGGELPPNVEVRAGDKVFILNVKEMKQTGQVYGAVISFREKTELKKLINKLTEMKKYSEDLRAQTHEFSNKLYAILGLLELGEYNEAIELIKEEYAIQNEQHEILFQNIHSQRVQAILLGKMGKASEKKVKLSIDENSFLESLPEHVGSSQLITIIGNLIDNAFEAVAEKEKKEVAFFMTDIGRDIVIEVADSGDGVPQEKTETIFEKGYSSKGTRRGYGLANLKEAVSELQGSIEISQQKSGGAVFTVFIPKERPKGESV
>NZ_CP054479.1|WP_007610021.1|3404731_3405412_-|response-regulator
MINIAIAEDDFRIAQIHEKFIEHLDGFNVIGKAINAKDTISLLEKRQPDLLLLDIYMPDELGTDLLPLIRGRFPSVDIIIITASAETRLLQEALRSGVSHYVIKPVSAHKFTEVLLQYREKREWLHSQPELSQSVIDMFFGSGQKEQKQLNDLPTGINSITLQKIKNALRAAQKGMTAEELGEKMGASRTTARRYAEFLVSREEALAELEYGIIGRPERKYYLAHE
>NZ_CP054479.1|WP_061861957.1|3403756_3404719_-|tripartite-tricarboxylate-transporter-substrate-binding-protein
MKRLGVLLVMLAALVSYDGRQMAGIRSVEGPVEIVVPAAPQGGWDVTAKALQSVIERKQILGRPVKIVYKPGGGGDSGWKYVNERKTDVISMNSSLLLSNEILGQSRLKAADFTPLAIIAKEWQTVALPKDSKIKSGKRLLGDIKAHPGGIKIGFAPGLGNDDQLSFARAAEMAGISPFDIRFFQYGSSNEVIEALISHEIDAASMTISEARDAYRKGKITLAAVTSDKRLSGFSDVPTWKEQGVPFVFAHWRGIMGPKDMTEGEIVYWDQALKQITSSAEWKQMLKKRDWESFYKNSSGAKRFLEEQTEFYKEMMSSEK
>NZ_CP054479.1|WP_014417175.1|3402265_3403564_-|citrate-transporter
MLAILGFLMMLVFMVLIMTKRLSVLTALVLTPIVFALFAGFSFNRVGEMMISGIEQVAPIAVMIMFAILYFGIMIDTGLFDPMVSRILKLVKGDPLKIVVGTAVLTMLVALDGDGSTTYMITTSAMLPLYIMLGIRPIILAGIAGVGMGIMNTIPWGGATPRAASALGVDPAELTGPMLPVIASGMVCMIVVAYVLGRMERKRLGVIELKQPSHTNETAAAAEDEWKRPKLWWFNLMLTLSLVGFLVSGKVNLTVLFIIAFCIALIVNYPKLNDQRERISAHSSNVLAIGSMIFAAGVFTGILTGTKMVDEMAISLVSLIPEQMGGFIPAIVALTSGIFTFLMPNDAYFYGVLPILSETAVAYGVDKVEIARASIIGQPIHMLSPLVPSTHLLVGLAGVTIDEHQKFAMKWAVLAVIVMTAFALIIGAITIF
>NZ_CP054479.1|WP_014417176.1|3401419_3402214_-|MBL-fold-metallo-hydrolase
MSDPFMPLFSVRSGAGFKAADGVYGLTVQIANVYFIENPSAPREIILVDAGMPQSAEMITEEMKRRFKEGYQLKAVILTHGHFDHVGAIEELLELWNVPVYIHEKELPYVTGKADYPPARPDAKKGLVAKLSPLFPRHTIRIPSVQALPSDGTVPFLEEWKWVHTPGHTPGHISLFRDKDRVLLAGDAVITVEQESLADVVIQKQELHGPPAYFTADTQTAAASVQKLAELEPEALLTGHGIPMTGKNYREDLLTLAEKLHSVL
>NZ_CP054479.1|WP_061890486.1|3400204_3401296_-|nitric-oxide-synthase-oxygenase
MKHTEILWDEAKDFIDVCYQELGMESQINTRLHAIKDEIERTGSYVHTAEELEHGAKMAWRNSNRCIGRLFWQSLNVIDRRGVNTKEEVRDALFEHIEIATNGGKIKPTITIFPPEKNGEKQVEIWNHQLIRYAGYETEKGRVGDPASYELTAVCEKLGWRGKRTDFDILPLLFRMKGDGQPVWYDLPQTLVKEVPITHPDIEEFADLNLRWYGVPIIADMRLEIGGLSYNAAPFNGWYMGTEIGARNLADEKRYDMLKKAAAVMGISASLNTDLWKDQVLVELNKAVLYSYKKHGVSIVDHHTAANQFKRFEEQEQDAGRKLTGDWTWLIPPISPASTHIFHKSYDNTIVKPNYYYQDKPYQ
>NZ_CP054479.1|WP_174532665.1|3421622_3428087_-|NTTRR-F1-domain
MNNPIINGSFETGTLAGWSSANTQINSLFAHSGRYSAQFIGAQPYAYLSQIVPISAKSLTLFVSLATLGNEPSPQVTLQIIYVSAAGEQISSIQENITPGNLPNVLFHTWSEIYKTSSVPSGAASAVIVLSKVSSGTVLIDDVSLAQTGGEPGVTGITGPTGVTGPTGVTGARGATGVTGVTGATGSTGARGATGSTGAPGVTGPTGATGSTGATGGTGVAGSTGETGLTGATGVTGSTGATGSTGATGPTGSTGPTGVTGAAGSTGPTGEIGPTGATGSTGVTGATGITGATGVTGVTGITGVTGSTGSAGATGPTGVAGPTGVVGPTGVTGSTGVTGSTGPTGEIGPTGVTGSTGSTGATGLTGETGATGTTGATGTTGATGETGVTGATGETGSTGVTGATGVTGPTGVTGVTGPTGPTGPTGSTGATGVTGATGSTGAIGSTGATGVTGSTGETGPTGATGVTGPTGAIGETGVTGITGATGSTGETGSTGSTGETGPTGETGATGSTGETGPTGVTGATGITGATGATGPIGPTGATGITGPTGETGVTGVTGTTGVTGSTGATGVTGATGITGATGATGTTGPTGATGETGSTGETGPTGETGATGSTGETGPTGVTGSTGETGSTGVTGATGITGATGATGPIGPTGATGETGATGSTGEIGPTGSTGSTGAAGPTGATGSTGSTGPTGVTGATGSTGVTGPTGVTGSTGVTGSTGSTGETGSTGVTGATGVTGETGATGITGPTGATGTTGSTGPTGPTGVTGATGATGPTGATGVTGATGETGPTGPTGVIGATGETGSTGETGPAGVTGPTGSTGATGSTGETGPTGITGPTGVTGSTGVTGETGATGVTGATGSTGETGSTGVTGAIGPEGPTGETGATGAIGPTGGTGSTGSTGVTGEIGPTGETGATGVTGPTGATGSTGAMGSTGATGVTGVTGSTGATGVTGEIGPTGETGPTGATGVTGPTGAIGETGVTGITGATGATGITGATGVAGSTGSTGPTGITGVTGATGVTGPTGVTGSTGVTGATGSTGPTGSTGETGTTGSTGSTGVTGAMGVTGSTGATGSTGSTGVTGVTGATGSTGSTGETGPTGSTGETGATGASGSTGATGITGITGPTGLTGVTGATGATGATGETGATGVTGEIGPTGEAGPTGPTGSIGATGPTGVTGVTGEIGPTGEAGPTGPTGSTGITGATGVTGSTGETGPTGETGPTGVTGSTGETGPTGVTGVTGETGPTGITGPTGETGAIGVTGATGAMGVTGATGVTGSTGTTGTTGITGPTGSTGPTGSTGVTGATGITGATGVTGETGETGPTGPTGPTGVTGETGETGSTGETGATGETGPAGVTGPTGSTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGATGPTGVTGATGVTGATGETGPTGITGPTGVTGSTGPTGVTGSTGETGPTGATGETGSTGVTGSTGETGATGVTGSTGATGSTGVTGATGPTGATGITGATGSTGVTGTTGSTGVTGSTGETGATGVTGPTGVTGVTGVTGVTGATGEIGLTGATGPTGVTGSTGETGPTGVTGSTGETGPTGVTGVTGETGPTGITGPTGETGATGVTGVTGETGATGETGATGITGEMGPTGATGITGSTGSTGATGVTGITGPTGSTGVTGATGITGATGITGETGATGSTGSTGVTGATGSTGETGPTGATGSTGPTGATGVTGEIGPTGSTGATGATGPTGITGPTGSTGPTGITGPTGATGATGVTGPTGSTGPTGITGPTGATGATGVTGPTGSTGPTGITGPTGATGATGVTGSTGSTGPTGVTGSTGSTGATGVTGITGPTGITGPTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGVTGATGVTGATGVTGVTGATGSTGVTGSTGPTGATGSTPALLFTRTNGPLTVYPPLNTEVPVATLAIPVNALQNVKLDYALSVAITSAANSNFVFEVRLYRGTVQIHTRTLSRTNTTAATESFSIADTTVDTAPTAGTNTYQLRIILTTANNLTAATALNIDFNSISFPTT
>NZ_CP054479.1|WP_174532761.1|3428201_3428900_-|collagen-like-protein
MSSGRDQYMILKQKPYKYMSRHMKRRYEQLPCELERPETGAEKRFPSSDENRSALCVPGLRGPEGKRGPAGSRGPQGEAGPPGPPGPAGPPGAVPAVAFHNTADQMMIPLEGTPINVLSTVIAAPTDQLVKTDAVIQVNVELDPLASHFSLVLAVDLQRNGVSIQTQRQERNLFSSGGQIIGIPFTYIDEMKADETAAYQLYLSVLSSNLVTQVAAANRSLIATGFPIQGSD
>NZ_CP054479.1|WP_007408966.1|3429006_3430443_-|anion-permease
MASEKDAKKQQAVKIIPLLITVAVGLIIWFIPAPSGLEPKAWHLFAIFVATIIGFISKPLPMGAIAIFALAVTALTGTLSIENTLSGFGNKTIWLIVIAFFISRGFIKTGLGARISYVFVQRFGKKTLGLSYSLLFSDLILSPAIPSNTARAGGIIFPIIRSLSETFGSTPADGTERKIGAFLLKTGFQGNLITSAMFLTAMAANPLIAKLAHDVAGVDITWTSWAIAAIVPGLASLIITPLVIYKLYPPEIKETPDAAKIATEKLKEMGPFKKSELSMVIVFLLVLALWIFGGSLNIDATTTALIGLSVLLLSQVLTWEDIKKEQGAWDTLTWFAALVMLANFLNELGMVSWFSNMMKSSVSGFSWIVAFMILIVVYYYTHYFFASATAHISAMYAAFLAVIVAAGAPPLLAALSLAFFSNLFGSTTHYGSGAAPVFFGAGYISQSKWWSIGFILSIVHIVTWLVIGGLWWKVLGLW
>NZ_CP054479.1|WP_094296470.1|3430567_3431833_-|pectate-lyase
MKKMLLMLAICLCMIPADVYAADLGRQTLGTNDGWGAASGGTTGGAKASSSNVYTVSNRQQLVSALGGSANSTPKIIYIQGTINMNTDDRNKTLGFNDYKDPAYDLNAYLKAYDPDKWGKKAPSGTQEDARQRSQKNQKARVVVDIPSNTTIIGSGSNAKVTGGSFNIKNGVDNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSEYDNITINGATHIWIDHCTFNDGSNPDSGFPYYYGRKYQHHDGQTDIANGANYITLSYNKYHDHDKGSVIGNSDSKTSDEGKLKVTIHHNYYQNIVQRAPRVRYGQVHIYNNFYAGSKSAAYPFSYAWGAGHASKIYAQNNVFEVPGLAADKVISVFSGGKALHEDGTLLNGASINASAANGLSQSVGWTPSLHGSIGSSSNVKSDVISKAGSGILK
>NZ_CP054479.1|WP_003155650.1|3431996_3432344_-|general-stress-protein
MKPVVREYTNDQKLMQDVKELQQLGVAKEDVYVLSHDDDRTDRLADNTDVNTIGAKETGIKHAVGNMFNKKGDELRNKIHEIGFSEEEASQFEKRLDEGKVLLFVTDNEKVKSWA
>NZ_CP054479.1|WP_007610002.1|3432535_3432886_+|DUF3212-family-protein
MVPIHYFSPEQRFNAWVVSDLVKQVFRRHTRCPDGIKELTAFAEDTFHINIDFVFSIIINIGDIESVLPKEIENRLGSYLTALQPVVTADMLHSSKTNAYEYLEHEKNTDVYRLFY
>NZ_CP054479.1|WP_021495142.1|3433013_3434033_+|NADP-dependent-oxidoreductase
MPNNQQQIQLARRPKGVPAHDDFRFETIAVPEPKDGEVLVKTSYVSVDPYMRGRMQDTKSYVEPFALDEAITGGVIAEVLTDGDKLKKGDVVIGNLAWQEYSAVNESALRKLDTDIAPAQAYLGILGMTGLTAYFGLLDIGRPKKGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIAYLKEELQFDEAINYKTADDIQKALEQACPDGVDVYFDNVGGPISDAVINLLNEFARIPVCGAISSYNTESEEEDMGPRVQPKLIKTKALMQGFIVSDYADRFSEGAKQLAEWLKDGKLHYEETITEGFSNIPDAFLGLFKGENKGKQIIKVSDLS
>NZ_CP054479.1|WP_021495144.1|3434603_3435734_-|DEAD/DEAH-box-helicase
MTQTWPFLQHTQPFIAENWEASGFQEPTVIQEKAAQVIMEGKDVIAESPTGTGKTLAYTLPVLERINPEQKHPQVIILAPSRELVMQIFQVIQEWKKGSDLRALSLIGGANVKKQVEKLKNKPHIIAGTPGRVLELIQAKKLKMHEVKTIVLDEADQLVTQEHRETMKKIIKTTLKDRQLLSFSATLQPETEQVLNTIAHEPAVLKVERNTAEKARVTHQYLVCDQRDKVKLLQKLSRLNGMQALVFVRDIGNLSVYAEKLAYHHVDLGILHGEAKKMERAKILSAFERGEFPLLLATDIAARGLDIDDLPYVIHADIPNEDGYIHRSGRTGRAGKEGTVLSLVTPMEESKLKKMAKSLGIELKEAVYSGGKLSEK
>NZ_CP054479.1|WP_053285235.1|3435905_3437462_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MSILSVKDLSHGFGDRALFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWAKNVRVGYLDQHTVLEKGKTIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEQLLEDVGVIQDALTNNDFYVIDSKVEEIARGLGLQDVGLDRDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYEDAFILISHDIPFLNSVINLIYHVENQELTRYVGDYHQFMEVYEVKKQQLEAAYKKQQQEVAELKDFVARNKARVSTRNMAMSRQKKLDKMDMIELAAEKPKPEFHFKPARTSGKLIFETKDLVIGYDTPLSRPLNLRMERGQKVALYGANGIGKTTLLKSLLGEIQPLEGTVERGEHQYTGYFEQEVKETNNNTCIEEVWSEFPSFTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDVDAKEELKRALKEYKGSILLISHEPEFYMDIATETWNCESWTTKVL
>NZ_CP054479.1|WP_007408959.1|3437505_3438690_-|MFS-transporter
MDTSSQQKTGLFSQPKAVWAVAFACVISFMGIGLVDPILPAIAAQLHASPSEVSLLFTSYLLVTGFMMFFSGAISSRIGAKWTLLLGLIFIIVFAALGGSSSSIAQLVGYRGGWGLGNALFISTALAVIVGVSVGGSAKAIILYEAALGLGISVGPLAGGELGSISWRAPFFGVSVLMFIALCAISLMLPKLPKPAKRVGVFDAMKALKYKGLLTMAVSAFLYNFGFFILLAYSPFVLDLDEHGLGYVFFGWGLLLAITSVFTAPLVHKALGTVGSLVVLFIAFAVILIVMGIWTDHQTLIITCIVVAGAVLGMVNTIMTTAVMGSAPVERSIASSAYSSVRFIGGALAPWIAGMLSEHFTASTPYTVGGIVVFVGMLVLLMGRKHLAGIKAGH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP054479_1	1.29\|3421099\|22\|NZ_CP054479\|CRT	3421099-3421120	22	NZ_CP054479.1	3425502-3425523	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423819-3423840	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423837-3423858	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423855-3423876	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423873-3423894	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423891-3423912	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423909-3423930	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423927-3423948	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423945-3423966	2	0.909
NZ_CP054479_1	1.30\|3421153\|22\|NZ_CP054479\|CRT	3421153-3421174	22	NZ_CP054479.1	3423963-3423984	2	0.909

1. spacer 1.29|3421099|22|NZ_CP054479|CRT matches to position: 3425502-3425523, mismatch: 2, identity: 0.909

tgctccagtgaatcccgttgct	CRISPR spacer
tgctccagttactcccgttgct	Protospacer
********* * **********

2. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423819-3423840, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

3. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423837-3423858, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

4. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423855-3423876, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

5. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423873-3423894, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

6. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423891-3423912, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

7. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423909-3423930, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

8. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423927-3423948, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

9. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423945-3423966, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

10. spacer 1.30|3421153|22|NZ_CP054479|CRT matches to position: 3423963-3423984, mismatch: 2, identity: 0.909

tgctccagtcagcccggttgct	CRISPR spacer
tgctccagtcggccctgttgct	Protospacer
**********.**** ******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP054479_1	1.15\|3420226\|22\|NZ_CP054479\|CRT	3420226-3420247	22	MN044033	Klebsiella phage Marfa, complete genome	80591-80612	2	0.909
NZ_CP054479_1	1.15\|3420226\|22\|NZ_CP054479\|CRT	3420226-3420247	22	MN395284	Klebsiella phage PhiKpNIH-6, complete genome	112349-112370	2	0.909
NZ_CP054479_1	1.15\|3420226\|22\|NZ_CP054479\|CRT	3420226-3420247	22	MN106245	Klebsiella phage EI, complete genome	82164-82185	2	0.909
NZ_CP054479_1	1.15\|3420226\|22\|NZ_CP054479\|CRT	3420226-3420247	22	NC_048694	Klebsiella phage vB_Kpn_F48, complete genome	154620-154641	2	0.909
NZ_CP054479_1	1.15\|3420226\|22\|NZ_CP054479\|CRT	3420226-3420247	22	MN781108	Klebsiella phage vB_Kpn_P545, complete genome	153421-153442	2	0.909
NZ_CP054479_1	1.16\|3420280\|22\|NZ_CP054479\|CRT	3420280-3420301	22	NZ_CP014284	Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence	179112-179133	3	0.864
NZ_CP054479_1	1.16\|3420280\|22\|NZ_CP054479\|CRT	3420280-3420301	22	NZ_CP032609	Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence	271013-271034	3	0.864
NZ_CP054479_1	1.20\|3420541\|31\|NZ_CP054479\|CRT	3420541-3420571	31	NZ_CP014284	Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence	179112-179142	7	0.774
NZ_CP054479_1	1.20\|3420541\|31\|NZ_CP054479\|CRT	3420541-3420571	31	NZ_CP032609	Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence	271013-271043	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	531091-531121	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	531199-531229	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	531307-531337	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	531415-531445	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	146-176	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	553108-553138	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	553216-553246	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	858-888	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	647936-647966	7	0.774
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	104-134	8	0.742
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	530983-531013	8	0.742
NZ_CP054479_1	1.20\|3420541\|31\|NZ_CP054479\|CRT	3420541-3420571	31	NZ_CP016620	Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence	54898-54928	9	0.71
NZ_CP054479_1	1.20\|3420541\|31\|NZ_CP054479\|CRT	3420541-3420571	31	NC_021339	Streptomyces phage Zemlya, complete genome	17454-17484	9	0.71
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	101-131	9	0.71
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	553063-553093	9	0.71
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	647891-647921	9	0.71
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	648008-648038	9	0.71
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP021071	Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence	59-89	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015065	Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence	553288-553318	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	57-87	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	201-231	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	345-375	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	489-519	10	0.677
NZ_CP054479_1	1.22\|3420658\|31\|NZ_CP054479\|CRT	3420658-3420688	31	NZ_CP015063	Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence	714-744	10	0.677

1. spacer 1.15|3420226|22|NZ_CP054479|CRT matches to MN044033 (Klebsiella phage Marfa, complete genome) position: , mismatch: 2, identity: 0.909

tgctccagttgatcccgttatt	CRISPR spacer
agctccagttgataccgttatt	Protospacer
 ************ ********

2. spacer 1.15|3420226|22|NZ_CP054479|CRT matches to MN395284 (Klebsiella phage PhiKpNIH-6, complete genome) position: , mismatch: 2, identity: 0.909

tgctccagttgatcccgttatt	CRISPR spacer
agctccagttgataccgttatt	Protospacer
 ************ ********

3. spacer 1.15|3420226|22|NZ_CP054479|CRT matches to MN106245 (Klebsiella phage EI, complete genome) position: , mismatch: 2, identity: 0.909

tgctccagttgatcccgttatt	CRISPR spacer
agctccagttgataccgttatt	Protospacer
 ************ ********

4. spacer 1.15|3420226|22|NZ_CP054479|CRT matches to NC_048694 (Klebsiella phage vB_Kpn_F48, complete genome) position: , mismatch: 2, identity: 0.909

tgctccagttgatcccgttatt	CRISPR spacer
agctccagttgataccgttatt	Protospacer
 ************ ********

5. spacer 1.15|3420226|22|NZ_CP054479|CRT matches to MN781108 (Klebsiella phage vB_Kpn_P545, complete genome) position: , mismatch: 2, identity: 0.909

tgctccagttgatcccgttatt	CRISPR spacer
agctccagttgataccgttatt	Protospacer
 ************ ********

6. spacer 1.16|3420280|22|NZ_CP054479|CRT matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 3, identity: 0.864

taccccggttgctccggtgagc	CRISPR spacer
taccccggttgctccggtggct	Protospacer
*******************. .

7. spacer 1.16|3420280|22|NZ_CP054479|CRT matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 3, identity: 0.864

taccccggttgctccggtgagc	CRISPR spacer
taccccggttgctccggtggct	Protospacer
*******************. .

8. spacer 1.20|3420541|31|NZ_CP054479|CRT matches to NZ_CP014284 (Bacillus thuringiensis strain Bt185 plasmid pBT1850294, complete sequence) position: , mismatch: 7, identity: 0.774

atttccggttacaccggttgctccggttact	CRISPR spacer
tggtcccgttaccccggttgctccggtggct	Protospacer
   *** ***** ************** .**

9. spacer 1.20|3420541|31|NZ_CP054479|CRT matches to NZ_CP032609 (Bacillus thuringiensis strain QZL38 plasmid p.2, complete sequence) position: , mismatch: 7, identity: 0.774

atttccggttacaccggttgctccggttact	CRISPR spacer
tggtcccgttaccccggttgctccggtggct	Protospacer
   *** ***** ************** .**

10. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

11. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

12. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

13. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

14. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

15. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

16. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

17. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

18. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 7, identity: 0.774

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgat	Protospacer
 .*.*********** ***.*******.* *

19. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 8, identity: 0.742

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
ggcgccggtcgagccggttgctccggtcgaa	Protospacer
 .*.*********** ***.*******.*

20. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 8, identity: 0.742

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccggttgctccggtcgat	Protospacer
..  *********** ***.*******.* *

21. spacer 1.20|3420541|31|NZ_CP054479|CRT matches to NZ_CP016620 (Microvirga ossetica strain V5/3m plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.71

atttccggttacaccggttgctccggttact	CRISPR spacer
gcgcccgatcacaccggttgctccggtcagg	Protospacer
.. .***.*.*****************.*

22. spacer 1.20|3420541|31|NZ_CP054479|CRT matches to NC_021339 (Streptomyces phage Zemlya, complete genome) position: , mismatch: 9, identity: 0.71

atttccggttacaccggttgctccggttact	CRISPR spacer
cgcgccggttgcaccggtcgctccggtgtcg	Protospacer
  . ******.*******.********  *

23. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 9, identity: 0.71

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatca	Protospacer
..  *********** ***.*******  *

24. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 9, identity: 0.71

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatca	Protospacer
..  *********** ***.*******  *

25. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 9, identity: 0.71

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatca	Protospacer
..  *********** ***.*******  *

26. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 9, identity: 0.71

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatca	Protospacer
..  *********** ***.*******  *

27. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP021071 (Mesorhizobium sp. WSM1497 plasmid pWSM1497, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

28. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015065 (Mesorhizobium ciceri biovar biserrulae strain WSM1284 plasmid pMc1284, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

29. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

30. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

31. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

32. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

33. spacer 1.22|3420658|31|NZ_CP054479|CRT matches to NZ_CP015063 (Mesorhizobium ciceri strain CC1192 plasmid pMc1192, complete sequence) position: , mismatch: 10, identity: 0.677

tacaccggtcgagcccgttactccggttgct	CRISPR spacer
cgatccggtcgagccagttgctccggtatta	Protospacer
..  *********** ***.*******  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

471223 : 478891

Bacillus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_029972897.1\|471223_471961_+	NTP transferase domain-containing protein	G3MA50	Bacillus_virus	5.0e-47	42.7
WP_061860985.1\|471963_472911_+	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.3e-68	42.6
WP_024085934.1\|472931_473780_+	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.4e-37	37.3
WP_003150986.1\|473776_474232_+	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA
WP_025649399.1\|474590_475517_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.1e-43	45.9
WP_053285333.1\|475581_476286_+	ABC transporter permease	NA	NA	NA	NA
WP_174532367.1\|476306_477026_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA
WP_014419158.1\|477255_477954_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.2e-35	35.8
WP_053285335.1\|477955_478891_+	sensor histidine kinase	W8CYF6	Bacillus_phage	1.3e-23	28.5

DBSCAN-SWA_2

1442566 : 1484048

Bacillus_virus(20.0%)

coat,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007408149.1\|1442566_1443829_+\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.2e-147	65.3
WP_007612897.1\|1443979_1445638_+\|protease	ATP-dependent protease LonB	A0A167RA83	Powai_lake_megavirus	1.9e-14	32.7
WP_014418556.1\|1445836_1448161_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.0e-183	44.2
WP_003152626.1\|1448157_1448745_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_094296067.1\|1448777_1449269_-	hypothetical protein	NA	NA	NA	NA
WP_003152628.1\|1449462_1450830_+\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_007408154.1\|1450837_1451668_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_163094412.1\|1451702_1452644_+	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_014418554.1\|1452633_1453413_+	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_029973366.1\|1453418_1454393_+	porphobilinogen synthase	NA	NA	NA	NA
WP_021494394.1\|1454421_1455711_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_174532466.1\|1455843_1457721_+	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_163094361.1\|1457754_1458777_+\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_003152639.1\|1458791_1458983_-	hypothetical protein	NA	NA	NA	NA
WP_174532467.1\|1459435_1462078_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	3.7e-161	42.3
WP_094296065.1\|1462136_1463429_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_017418284.1\|1463569_1464322_+	prepilin peptidase	NA	NA	NA	NA
WP_065180394.1\|1464448_1465450_+	SPOR domain-containing protein	NA	NA	NA	NA
WP_065180393.1\|1465590_1466160_+	septum formation inhibitor Maf	NA	NA	NA	NA
WP_007408165.1\|1466191_1466887_+	DNA repair protein RadC	NA	NA	NA	NA
WP_003152647.1\|1466978_1467992_+	rod shape-determining protein MreB	NA	NA	NA	NA
WP_016938781.1\|1468022_1468886_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_007408167.1\|1468882_1469401_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_003152653.1\|1469454_1470135_+	septum site-determining protein MinC	NA	NA	NA	NA
WP_003152655.1\|1470137_1470941_+	septum site-determining protein MinD	NA	NA	NA	NA
WP_017418246.1\|1471068_1471872_+	M23 family metallopeptidase	NA	NA	NA	NA
WP_103526720.1\|1471864_1472731_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_003152660.1\|1472876_1473185_+	50S ribosomal protein L21	NA	NA	NA	NA
WP_012118103.1\|1473187_1473529_+\|protease	ribosomal-processing cysteine protease Prp	NA	NA	NA	NA
WP_003152662.1\|1473541_1473826_+	50S ribosomal protein L27	NA	NA	NA	NA
WP_014418543.1\|1474143_1474722_+	Spo0B domain-containing protein	NA	NA	NA	NA
WP_172870028.1\|1474753_1476040_+	GTPase ObgE	NA	NA	NA	NA
WP_007408173.1\|1476093_1476537_+	transcriptional regulator ThrR	NA	NA	NA	NA
WP_014418542.1\|1476550_1477408_+	prephenate dehydratase	NA	NA	NA	NA
WP_014418541.1\|1477433_1477976_-	transcription repressor NadR	NA	NA	NA	NA
WP_174532468.1\|1477972_1479124_-	IscS subfamily cysteine desulfurase	A0A141ZJV0	Faustovirus	2.3e-30	29.6
WP_072177622.1\|1479230_1480796_+	L-aspartate oxidase	NA	NA	NA	NA
WP_038461554.1\|1480777_1481626_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA
WP_014418538.1\|1481627_1482731_+	quinolinate synthase NadA	NA	NA	NA	NA
WP_014418537.1\|1482857_1484048_+\|coat	SafA/ExsA family spore coat assembly protein	NA	NA	NA	NA

DBSCAN-SWA_3

1874107 : 1880360

Staphylococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_103526779.1\|1874107_1875223_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.1e-53	36.0
WP_007409425.1\|1875203_1875851_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.5e-39	44.3
WP_094296008.1\|1875865_1877062_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	8.2e-116	54.4
WP_003153372.1\|1877094_1877559_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-43	59.3
WP_003153373.1\|1877675_1878050_+	GNAT family N-acetyltransferase RibT	NA	NA	NA	NA
WP_021494254.1\|1878115_1878637_-	DUF309 domain-containing protein	NA	NA	NA	NA
WP_003153376.1\|1878724_1878814_-	YjcZ family sporulation protein	NA	NA	NA	NA
WP_007409427.1\|1879021_1879777_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.9e-10	25.7
WP_007409428.1\|1879766_1880360_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	2.6e-14	36.6

DBSCAN-SWA_4

1957287 : 2018704

Bacillus_phage(41.03%)

terminase,protease,integrase,holin,head,capsid,coat,tail,portal,tRNA,plate

attL 1966339:1966357|attR 2005385:2005403

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003153515.1\|1957287_1958580_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	7.9e-56	29.5
WP_003153516.1\|1958674_1959373_+	DnaD domain-containing protein	NA	NA	NA	NA
WP_007612187.1\|1959391_1960051_+	endonuclease III	NA	NA	NA	NA
WP_012117839.1\|1960047_1960539_+	hypothetical protein	NA	NA	NA	NA
WP_032863588.1\|1960616_1963400_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA
WP_014418235.1\|1963438_1964047_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-21	33.7
WP_003153525.1\|1965093_1965198_-	hypothetical protein	NA	NA	NA	NA
WP_014418233.1\|1965403_1965649_+	DUF5446 family protein	NA	NA	NA	NA
WP_014418232.1\|1965694_1966063_+	YppE family protein	NA	NA	NA	NA
WP_003153532.1\|1966101_1966284_-	hypothetical protein	NA	NA	NA	NA
1966339:1966357	attL	NA	NA	NA	NA
WP_061862316.1\|1966470_1966938_+\|coat	spore coat protein	NA	NA	NA	NA
WP_007612169.1\|1966967_1967381_-	hypothetical protein	NA	NA	NA	NA
WP_012117833.1\|1967519_1968026_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA
WP_014418230.1\|1968124_1970371_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	1.6e-08	26.9
WP_022553048.1\|1970390_1971629_+	ribonuclease H-like domain-containing protein	NA	NA	NA	NA
WP_007409498.1\|1971762_1971858_+	hypothetical protein	NA	NA	NA	NA
WP_003153539.1\|1971941_1972178_+\|coat	spore coat protein	NA	NA	NA	NA
WP_007409499.1\|1972266_1972815_+	DUF1273 domain-containing protein	NA	NA	NA	NA
WP_003153541.1\|1972894_1973194_+	cell division regulator GpsB	NA	NA	NA	NA
WP_040237997.1\|1973727_1974894_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA
WP_003153548.1\|1974934_1975087_-	YpzG family protein	NA	NA	NA	NA
WP_003153550.1\|1975252_1975444_+	hypothetical protein	NA	NA	NA	NA
WP_014721409.1\|1975547_1977467_+	ATP-dependent DNA helicase	A0A2P1N0K5	Streptomyces_phage	1.8e-11	21.8
WP_014418224.1\|1977578_1979081_+	carboxypeptidase M32	NA	NA	NA	NA
WP_014418223.1\|1979413_1979998_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_100261870.1\|1979994_1981299_+	purine permease	NA	NA	NA	NA
WP_094295995.1\|1981342_1982539_-\|integrase	site-specific integrase	S6C485	Thermus_phage	1.1e-80	44.2
WP_043021753.1\|1982901_1983282_-	helix-turn-helix domain-containing protein	A0A0A7RTK4	Clostridium_phage	3.3e-10	42.7
WP_076983071.1\|1983453_1983702_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_032863594.1\|1983714_1984029_+	hypothetical protein	A0A2H4JDL0	uncultured_Caudovirales_phage	1.9e-11	49.3
WP_047935882.1\|1984025_1984754_+	Rha family transcriptional regulator	A0A2H4J4N4	uncultured_Caudovirales_phage	1.4e-89	68.3
WP_014418218.1\|1984811_1985384_+	helix-turn-helix transcriptional regulator	A0A2H4J884	uncultured_Caudovirales_phage	4.7e-61	56.9
WP_014418217.1\|1985380_1985638_+	hypothetical protein	A0A2H4J4M9	uncultured_Caudovirales_phage	1.1e-09	39.8
WP_014721404.1\|1985634_1985832_+	hypothetical protein	NA	NA	NA	NA
WP_032859263.1\|1985933_1986122_+	hypothetical protein	NA	NA	NA	NA
WP_025852621.1\|1986118_1987039_+	hypothetical protein	A0A0A7S0A9	Clostridium_phage	4.5e-90	64.0
WP_082029678.1\|1987058_1987796_+	PD-(D/E)XK nuclease-like domain-containing protein	A0A2P1JU03	Anoxybacillus_phage	4.8e-42	42.4
WP_032859408.1\|1987993_1988695_+	DnaD domain protein	NA	NA	NA	NA
WP_141233183.1\|1988579_1989527_+	ATP-binding protein	A6XMI1	Bacillus_virus	1.9e-54	50.2
WP_040221743.1\|1989762_1990191_+	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	1.7e-44	65.7
WP_162918043.1\|1990241_1990406_+	hypothetical protein	A0A2H4J4N7	uncultured_Caudovirales_phage	6.7e-13	66.0
WP_025852610.1\|1990503_1990707_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	2.8e-21	70.3
WP_025852608.1\|1990742_1991000_+	hypothetical protein	A0A2H4JA61	uncultured_Caudovirales_phage	2.5e-06	40.5
WP_025852606.1\|1991162_1991828_+	hypothetical protein	NA	NA	NA	NA
WP_025852602.1\|1992075_1992261_+	hypothetical protein	NA	NA	NA	NA
WP_174532508.1\|1992280_1992796_+	sigma-70 family RNA polymerase sigma factor	A0A1L2JY33	Aeribacillus_phage	3.0e-27	43.2
WP_038458912.1\|1992877_1993093_+	hypothetical protein	NA	NA	NA	NA
WP_174532509.1\|1993171_1994044_+	hypothetical protein	NA	NA	NA	NA
WP_038458908.1\|1994120_1994300_+	hypothetical protein	NA	NA	NA	NA
WP_162839616.1\|1994431_1994581_+	hypothetical protein	NA	NA	NA	NA
WP_088056584.1\|1994843_1995056_+	helix-turn-helix domain-containing protein	A0A1Z1LZP5	Bacillus_phage	8.4e-08	42.4
WP_088056583.1\|1995192_1995399_+	hypothetical protein	NA	NA	NA	NA
WP_174532510.1\|1995704_1996070_+	HNH endonuclease	A0A1U7Q1S7	Geobacillus_virus	7.9e-30	55.0
WP_046341352.1\|1996296_1996812_+\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	5.4e-32	42.3
WP_038458898.1\|1996808_1998518_+\|terminase	terminase large subunit	A0A0S2GLF0	Bacillus_phage	1.7e-207	63.1
WP_174532511.1\|1998531_1998702_+	hypothetical protein	Q9ZXF9	Bacillus_phage	1.0e-08	60.0
WP_174532512.1\|1998706_1999987_+\|portal	phage portal protein	D6R3Y6	Bacillus_phage	9.6e-155	63.3
WP_174532513.1\|1999949_2000576_+\|head,protease	HK97 family phage prohead protease	Q9ZXF7	Bacillus_phage	2.5e-84	77.7
WP_174532514.1\|2000614_2001907_+\|capsid	phage major capsid protein	A0A0A7RTL2	Clostridium_phage	3.1e-92	48.1
WP_174532515.1\|2001929_2002319_+	collagen-like protein	D6R3Z0	Bacillus_phage	6.5e-14	50.0
WP_014418194.1\|2002336_2002639_+\|head,tail	phage gp6-like head-tail connector protein	A0A0S2GLH6	Bacillus_phage	3.6e-12	45.2
WP_094295980.1\|2002628_2002943_+\|head	phage head closure protein	A0A2H4JCB1	uncultured_Caudovirales_phage	3.4e-13	38.2
WP_043021774.1\|2002943_2003342_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_094295979.1\|2003338_2003722_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_174532750.1\|2003736_2004345_+\|tail	phage tail protein	A0A2H4J8F3	uncultured_Caudovirales_phage	2.9e-24	35.5
WP_014418189.1\|2004410_2004788_+	hypothetical protein	NA	NA	NA	NA
WP_174532516.1\|2004984_2009472_+\|tail	phage tail tape measure protein	A0A1Q1PVX7	Staphylococcus_phage	5.5e-64	32.8
2005385:2005403	attR	NA	NA	NA	NA
WP_038458884.1\|2009465_2010305_+\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	8.0e-94	58.6
WP_014418186.1\|2010319_2012023_+\|tail	phage tail protein	D6R400	Bacillus_phage	2.3e-180	57.6
WP_174532517.1\|2012076_2014641_+	peptidase G2	D6R401	Bacillus_phage	0.0e+00	79.8
WP_174532518.1\|2014655_2016479_+\|plate	phage baseplate upper protein	D6R402	Bacillus_phage	1.7e-80	35.9
WP_040221740.1\|2016475_2016838_+	hypothetical protein	Q9ZXE0	Bacillus_phage	4.6e-30	56.3
WP_014418183.1\|2016837_2017023_+	XkdX family protein	Q9ZXD9	Bacillus_phage	5.8e-21	72.1
WP_040221739.1\|2017072_2017495_+\|holin	phage holin family protein	D6R405	Bacillus_phage	3.6e-58	87.2
WP_014418181.1\|2017540_2018704_+	N-acetylmuramoyl-L-alanine amidase	A0A1P8CWN6	Bacillus_phage	1.2e-68	49.1

DBSCAN-SWA_5

2364087 : 2370301

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_015417523.1\|2364087_2365056_-	stage V sporulation protein K	G3MAX6	Bacillus_virus	8.0e-53	40.9
WP_022553310.1\|2365362_2366121_+	N-acetylmuramoyl-L-alanine amidase	E5DV68	Deep-sea_thermophilic_phage	2.4e-52	50.0
WP_014417835.1\|2366170_2366791_-	hypothetical protein	A0A127AYS1	Bacillus_phage	5.4e-47	48.4
WP_012117608.1\|2366839_2367829_-	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	1.1e-155	83.0
WP_174532545.1\|2367846_2369949_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	85.5
WP_014417834.1\|2369908_2370301_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	G3MBF1	Bacillus_virus	5.0e-30	59.1

DBSCAN-SWA_6

2923637 : 2956062

Bacillus_phage(33.33%)

terminase,holin,capsid,tail,portal,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_007407257.1\|2923637_2924516_-	N-acetylmuramoyl-L-alanine amidase	Q9ZXD7	Bacillus_phage	3.7e-81	60.5
WP_174532596.1\|2924529_2924793_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	6.7e-23	64.4
WP_021493821.1\|2924806_2925070_-	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	2.1e-24	65.5
WP_160216823.1\|2925121_2925883_-\|portal	phage portal protein	NA	NA	NA	NA
WP_007610833.1\|2925939_2926137_-	XkdX family protein	A0A2H4JAA1	uncultured_Caudovirales_phage	7.3e-14	61.8
WP_017417608.1\|2926141_2926513_-	hypothetical protein	NA	NA	NA	NA
WP_174532597.1\|2926525_2928157_-	hypothetical protein	A0A1P8CWR7	Bacillus_phage	1.1e-54	33.5
WP_003154822.1\|2928159_2928432_-	hypothetical protein	NA	NA	NA	NA
WP_007407262.1\|2928428_2929007_-	YmfQ family protein	A0A2H4J717	uncultured_Caudovirales_phage	3.1e-12	31.0
WP_174532757.1\|2928990_2930037_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.0e-69	44.1
WP_160216822.1\|2930029_2930455_-	DUF2634 domain-containing protein	A0A2H4J6K5	uncultured_Caudovirales_phage	2.5e-11	35.9
WP_072177384.1\|2930558_2930825_-	DUF2577 family protein	S6C459	Thermus_phage	2.6e-06	37.5
WP_072177383.1\|2930824_2931802_-\|portal	phage portal protein	A0A1L6BY20	Clostridium_phage	1.1e-33	30.2
WP_007610816.1\|2931815_2932475_-	LysM peptidoglycan-binding domain-containing protein	G3MBQ1	Bacillus_virus	1.8e-08	45.3
WP_174532598.1\|2932467_2937351_-	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	3.2e-41	46.6
WP_015239684.1\|2937338_2937491_-	hypothetical protein	NA	NA	NA	NA
WP_003154836.1\|2937532_2937979_-\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	1.0e-10	35.8
WP_003154837.1\|2938053_2938497_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	8.4e-26	45.2
WP_007610810.1\|2938498_2939896_-\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7RTT5	Clostridium_phage	9.0e-82	40.4
WP_007610809.1\|2939895_2940105_-	hypothetical protein	NA	NA	NA	NA
WP_029973074.1\|2940101_2940548_-	hypothetical protein	NA	NA	NA	NA
WP_021494024.1\|2940544_2941048_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_021494025.1\|2941044_2941401_-	DUF3599 family protein	NA	NA	NA	NA
WP_021494026.1\|2941397_2941781_-	DUF3199 family protein	NA	NA	NA	NA
WP_007407274.1\|2941797_2942733_-\|capsid	phage major capsid protein	A0A1B1P7E3	Bacillus_phage	3.3e-104	62.8
WP_094295692.1\|2942759_2943605_-\|portal	phage portal protein	A0A1B1P7E4	Bacillus_phage	2.5e-55	58.1
WP_094296112.1\|2943624_2945016_-\|portal	phage portal protein	A0A1B1P7C8	Bacillus_phage	2.3e-138	55.8
WP_174532599.1\|2945064_2946363_-\|terminase	PBSX family phage terminase large subunit	M4ZRM5	Bacillus_phage	2.1e-149	58.9
WP_022553491.1\|2946359_2947157_-\|terminase	terminase small subunit	A0A0S2MVB6	Bacillus_phage	2.3e-58	49.4
WP_174532600.1\|2947269_2947782_-	sigma-70 family RNA polymerase sigma factor	A0A0K2CNQ1	Brevibacillus_phage	2.9e-22	44.6
WP_003154859.1\|2947888_2948092_-	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	5.4e-12	48.5
WP_014417521.1\|2948510_2948687_-	hypothetical protein	NA	NA	NA	NA
WP_022553492.1\|2948686_2949487_-	ATP-binding protein	A6XMI1	Bacillus_virus	4.0e-58	45.3
WP_046559509.1\|2949386_2950214_-\|portal	phage portal protein	S6BFM4	Thermus_phage	1.7e-19	49.0
WP_073982154.1\|2950203_2950383_-	hypothetical protein	NA	NA	NA	NA
WP_003154871.1\|2950573_2950912_+	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	8.4e-18	45.8
WP_072177405.1\|2951059_2951650_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.0e-39	51.7
WP_021494033.1\|2951671_2952508_-	manganese catalase family protein	NA	NA	NA	NA
WP_021494034.1\|2952578_2953181_-	poly-gamma-glutamate hydrolase family protein	A0A0Y0AJU6	Bacillus_phage	4.6e-43	48.3
WP_007610770.1\|2953290_2953668_+	PH domain-containing protein	A5GYQ0	Lactococcus_phage	1.5e-15	41.4
WP_095271584.1\|2953705_2954659_-	N-acetylmuramoyl-L-alanine amidase	A0A218KC88	Bacillus_phage	2.4e-62	69.3
WP_003154881.1\|2954801_2954936_-	PhrA family phosphatase inhibitor	NA	NA	NA	NA
WP_087920760.1\|2954925_2956062_-	S9 family peptidase	A0A1P8CWN8	Bacillus_phage	1.3e-94	47.9

DBSCAN-SWA_7

3018728 : 3036912

Klosneuvirus(33.33%)

coat,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003154992.1\|3018728_3019115_+\|coat	spore coat protein	NA	NA	NA	NA
WP_015239584.1\|3019152_3019467_+	hypothetical protein	NA	NA	NA	NA
WP_020955644.1\|3019559_3020060_+\|coat	spore coat protein	NA	NA	NA	NA
WP_007409090.1\|3020210_3020693_+\|coat	spore coat protein	NA	NA	NA	NA
WP_007409091.1\|3020841_3021285_+\|coat	spore coat protein	NA	NA	NA	NA
WP_174532613.1\|3021343_3021937_-\|coat	spore coat protein	NA	NA	NA	NA
WP_003155001.1\|3022028_3022805_-	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_015417222.1\|3022935_3023748_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_174532614.1\|3023770_3024781_-	thiazole biosynthesis adenylyltransferase ThiF	NA	NA	NA	NA
WP_099721942.1\|3024777_3025548_-	thiazole synthase	NA	NA	NA	NA
WP_007409096.1\|3025544_3025748_-	sulfur carrier protein ThiS	NA	NA	NA	NA
WP_014417430.1\|3025744_3026854_-	glycine oxidase ThiO	NA	NA	NA	NA
WP_029973136.1\|3026837_3027455_-	thiazole tautomerase TenI	NA	NA	NA	NA
WP_015417218.1\|3027432_3028140_-	thiaminase II	NA	NA	NA	NA
WP_029973137.1\|3028389_3030234_-	monovalent cation:proton antiporter family protein	NA	NA	NA	NA
WP_029973139.1\|3030460_3031210_+	bis(5'-nucleosyl)-tetraphosphatase PrpE	A0A1V0SJW2	Klosneuvirus	9.9e-11	26.3
WP_029973140.1\|3031243_3032137_-	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.4e-06	29.3
WP_003155018.1\|3032151_3032952_-	NAD kinase	NA	NA	NA	NA
WP_003155019.1\|3032969_3033605_-	GTP diphosphokinase	NA	NA	NA	NA
WP_012117290.1\|3033632_3033998_-	hypothetical protein	NA	NA	NA	NA
WP_029973141.1\|3034122_3034695_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_100261698.1\|3034699_3035386_+	lytic transglycosylase domain-containing protein	A0A1P8CWQ1	Bacillus_phage	7.9e-39	71.2
WP_100261697.1\|3035614_3036013_+	thiol management oxidoreductase	NA	NA	NA	NA
WP_003155024.1\|3036009_3036912_+\|protease	protease adaptor protein SpxH	NA	NA	NA	NA

DBSCAN-SWA_8

3522868 : 3532759

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014417107.1\|3522868_3524407_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.3e-77	50.5
WP_007408902.1\|3524403_3524991_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-26	38.8
WP_029973746.1\|3524987_3526028_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	4.8e-64	41.4
WP_014417105.1\|3526119_3527550_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	6.2e-54	32.7
WP_029973747.1\|3527525_3529754_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	7.2e-158	40.7
WP_021495182.1\|3529737_3530421_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_017419024.1\|3530417_3530672_-	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	2.1e-05	34.6
WP_007609852.1\|3530671_3531391_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3FUQ7	Synechococcus_phage	1.3e-47	44.7
WP_007408896.1\|3531466_3532759_-	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage