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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP054442 Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-2, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP054440 Staphylococcus saprophyticus strain UTI-058y chromosome, complete genome 1 crisprs csa3,WYL,DEDDh,cas3,DinG 0 0 10 0
NZ_CP054441 Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-1, complete sequence 0 crisprs NA 0 0 1 0
NZ_CP054443 Staphylococcus saprophyticus strain UTI-058y plasmid pUTI-058y-3, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP054440
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054440_1 288826-288923 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 895408 : 911123 25 Staphylococcus_phage(66.67%) integrase,terminase attL 897364:897383|attR 912893:912912
DBSCAN-SWA_2 1034439 : 1048665 16 Staphylococcus_phage(92.31%) NA NA
DBSCAN-SWA_3 1053104 : 1070192 15 Staphylococcus_phage(100.0%) tRNA NA
DBSCAN-SWA_4 1191961 : 1201086 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_5 1327387 : 1337354 11 uncultured_Mediterranean_phage(28.57%) NA NA
DBSCAN-SWA_6 1666856 : 1732757 73 Staphylococcus_phage(43.24%) plate,holin,transposase,portal,tRNA,terminase,tail,head NA
DBSCAN-SWA_7 1817517 : 1825992 9 Synechococcus_phage(16.67%) NA NA
DBSCAN-SWA_8 2063973 : 2082703 14 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_9 2091006 : 2098556 9 Pandoravirus(16.67%) NA NA
DBSCAN-SWA_10 2422223 : 2434143 15 Staphylococcus_phage(50.0%) integrase,terminase attL 2418465:2418479|attR 2438303:2438317
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP054441
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 29160 : 39458 9 Staphylococcus_phage(57.14%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage