CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP045257	Proteus mirabilis strain L90-1 chromosome, complete genome	4 crisprs	DEDDh,c2c9_V-U4,cas3,DinG,PD-DExK,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT,WYL,TnsE_C	1	19	13	3
NZ_CP045256	Proteus mirabilis strain L90-1 plasmid pL901, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP045255	Proteus mirabilis strain L90-1 plasmid pL902, complete sequence	0 crisprs	NA	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP045257_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045257_1

2444777-2444932

Orphan

Consensus_repeat	Method
ATAATTGCCTTTAGGTTGATATTT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045257_1

>merge|NZ_CP045257|1|2444777-2444932|CRISPRCasFinder
ATAATTCCCCTTAGGCTGATATTTACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAAATAATTGCCTTTAGGTTGATATTTATTATCAGATTCCGTTTTCGTATAGGATGCACCCACTAATGCATAATTGCCTTTGGGTTGATAATT

>NZ_CP045257|1|1|2444777-2444932|CRISPRCasFinder
ATAATTCCCCTTAGGCTGATATTT	ACCATCTGACTCTGATTTAGAATAACTATAACCTGTCGCTAA
ATAATTGCCTTTAGGTTGATATTT	ATTATCAGATTCCGTTTTCGTATAGGATGCACCCACTAATGC
ATAATTGCCTTTGGGTTGATAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045257.1\|WP_017628013.1\|2444178_2444358_+\|GhoT/OrtT-family-toxin	unknown	unknown	gnl\|CDD\|371222
NZ_CP045257.1\|WP_004243609.1\|2441554_2442172_+\|dimethylsulfoxide-reductase-subunit-B	unknown	unknown	gnl\|CDD\|131996
NZ_CP045257.1\|WP_004250719.1\|2449655_2450144_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004243606.1\|2437495_2438752_+\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP045257.1\|WP_004243617.1\|2447505_2447850_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_017628009.1\|2450146_2452450_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227699
NZ_CP045257.1\|WP_017628014.1\|2435258_2436896_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_012368079.1\|2433556_2434414_-\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|180656
NZ_CP045257.1\|WP_017628011.1\|2445672_2446329_-\|DUF2612-domain-containing-protein	unknown	unknown	gnl\|CDD\|371354
NZ_CP045257.1\|WP_004250737.1\|2432933_2433494_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP045257.1\|WP_004243612.1\|2443067_2443610_-\|DUF924-domain-containing-protein	unknown	unknown	gnl\|CDD\|377592
NZ_CP045257.1\|WP_004243627.1\|2452532_2452991_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004243622.1\|2448541_2449354_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004243621.1\|2447846_2448539_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375779
NZ_CP045257.1\|WP_004243623.1\|2449322_2449643_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_017628010.1\|2446325_2447513_-\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP045257.1\|WP_012368088.1\|2453050_2453503_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004243611.1\|2442175_2442952_+\|dimethyl-sulfoxide-reductase-anchor-subunit	unknown	unknown	gnl\|CDD\|225839
NZ_CP045257.1\|WP_004243604.1\|2434600_2435179_+\|HdeD-family-acid-resistance-protein	unknown	unknown	gnl\|CDD\|182308
NZ_CP045257.1\|WP_012368081.1\|2439104_2441543_+\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274006

Protein	Function_ID	Function_description	E-value
NZ_CP045257.1\|WP_017628013.1\|2444178_2444358_+\|GhoT/OrtT-family-toxin	gnl\|CDD\|371222	pfam10753, Toxin_GhoT_OrtT, Toxin GhoT_OrtT. GhoT is part of the GhoT-GhoS type V toxin-antitoxin (TA) system. OrtT is homologous to GhoT, but it is not part of a TA pair. In this case, it acts as an independent toxin to reduce growth during stress related to amino acid and DNA synthesis.	7.72766e-13
NZ_CP045257.1\|WP_004243609.1\|2441554_2442172_+\|dimethylsulfoxide-reductase-subunit-B	gnl\|CDD\|131996	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit. This family consists of the iron-sulfur subunit, or chain B, of an enzyme called the anaerobic dimethyl sulfoxide reductase. Chains A and B are catalytic, while chain C is a membrane anchor.	3.56619e-91
NZ_CP045257.1\|WP_004243606.1\|2437495_2438752_+\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	1.66678e-32
NZ_CP045257.1\|WP_017628009.1\|2450146_2452450_-\|hypothetical-protein	gnl\|CDD\|227699	COG5412, COG5412, Phage-related protein [Function unknown].	0.00232344
NZ_CP045257.1\|WP_012368079.1\|2433556_2434414_-\|D-amino-acid-transaminase	gnl\|CDD\|180656	PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed.	3.22889e-127
NZ_CP045257.1\|WP_017628011.1\|2445672_2446329_-\|DUF2612-domain-containing-protein	gnl\|CDD\|371354	pfam11041, DUF2612, Protein of unknown function (DUF2612). This is a phage protein family expressed from a range of Proteobacteria species. The function is not known.	7.61436e-72
NZ_CP045257.1\|WP_004250737.1\|2432933_2433494_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	5.86135e-15
NZ_CP045257.1\|WP_004243612.1\|2443067_2443610_-\|DUF924-domain-containing-protein	gnl\|CDD\|377592	pfam06041, DUF924, Bacterial protein of unknown function (DUF924). This family consists of several hypothetical bacterial proteins of unknown function. Structurally, this family resembles TPR-like repeats.	1.54842e-89
NZ_CP045257.1\|WP_004243621.1\|2447846_2448539_-\|hypothetical-protein	gnl\|CDD\|375779	pfam18352, Gp138_N, Phage protein Gp138 N-terminal domain. This domain is found in the N-terminal domain of gene product 138 (gp138) in an unidentified bacteriophage. Gp138 is thought to be involved in the process of opening the host cell membrane during infection. The domain has an OB-fold with an intramolecular disulfide bond between C114 and C120.	1.64931e-18
NZ_CP045257.1\|WP_017628010.1\|2446325_2447513_-\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	9.13292e-07
NZ_CP045257.1\|WP_004243611.1\|2442175_2442952_+\|dimethyl-sulfoxide-reductase-anchor-subunit	gnl\|CDD\|225839	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only].	1.76747e-46
NZ_CP045257.1\|WP_004243604.1\|2434600_2435179_+\|HdeD-family-acid-resistance-protein	gnl\|CDD\|182308	PRK10209, PRK10209, HdeD family acid-resistance protein.	2.20798e-64
NZ_CP045257.1\|WP_012368081.1\|2439104_2441543_+\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|274006	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family. Members of this family include known and probable dimethyl sulfoxide reductase (DMSO reductase) A chains. In E. coli, dmsA encodes the canonical anaerobic DMSO reductase A chain. The paralog ynfE, as part of ynfFGH expressed from a multicopy plasmid, could complement a dmsABC deletion, suggesting a similar function and some overlap in specificity, although YnfE could not substitute for DmsA in a mixed complex.	0

>NZ_CP045257.1|WP_017628013.1|2444178_2444358_+|GhoT/OrtT-family-toxin
MSVIATIGIGYLIGAVLSFIITFFLTKDPSLAMRLLSAFLIAITWPLSFPMAIIFSIFG
>NZ_CP045257.1|WP_004243612.1|2443067_2443610_-|DUF924-domain-containing-protein
MVPYQPVLTFWFEECTPKQWFQKDSAFDKEIKDRFGELCISASRAELASWRESIEGRLGEIIILDQFSRNIWRDTPKAFAQDNMALILAQEAIRLPEYLTLTPVKRKFLIMPFMHSESQKIHQDAIALFSQLNDDDTYQYELRHKEIIDKYGRYPHRNEILGRTSTPEELAFLQQPGSSF
>NZ_CP045257.1|WP_004243611.1|2442175_2442952_+|dimethyl-sulfoxide-reductase-anchor-subunit
MHELPLVFFTVLGSSAAGLFLIAYISKKLGQIDEQQLRNANILALILMLVGLGIGGLHVGQPLRFFNMLLGVGRSPMSNEAFLSGVFTGFAFATVALTIMKKWRGLREICNLFTVIFGLAFVWSIPQVYHIPTIANWNTDYTTLQFWMTLLIGGGVLAMVSGARRLGALSFIIGAIITFAARSGYVSFLSFNGPELSAEQSLFWGFQLAVLALGIVVVGFSALKAQTSKVTLATCAAAVVIAELSGRIAFYNLWHITM
>NZ_CP045257.1|WP_004243609.1|2441554_2442172_+|dimethylsulfoxide-reductase-subunit-B
MKQYGFYFDSTKCTGCKTCQVSCKDEKDLDLGPKFRRVYEYGGGSWAKQDGIWTQNIYSYYLSISCNHCSNPTCVAGCPTGAMHKREEDGLVVVNQDVCVGCRYCELRCPYGAPQFDEKKKLMSKCDGCYERVAQGMKPVCVESCPQRALDFDDIEVIRAKHGTECGIAPMPDPSLTNPNIVIKAHKDAKPSGDKTGSVQNAAEV
>NZ_CP045257.1|WP_012368081.1|2439104_2441543_+|molybdopterin-dependent-oxidoreductase
MSMSKIKNNVSITEMSRRGFIQSAAVLSGAAAVAGTVSLPFSANAQTPQGIRPDETSETIKYSACLVNCGSRCPLKVHVKDGVIRRISNETMFDDSTFGLHQIRPCLRGRSVRWKTYNPDRLKYPMKRVGKRGEGKFERISWDEATSIIADKLKYTIDTYGNEAIYYQYGTGSTGANLHGRTACKRLLSTVGGFLSDYGTYSYSQLTGIVPYVYGDMLESLLTEIENSDLVVMFGHNLAETRMSGGGQFYETLNALDKSKSKVIIIDPRRTDSVTTLGAEWIPIYPGTDAALVAALGYVMIQEGITDEAFLREYCIGWDKQTLPASAPENGSYKDYILGNGPDGIAKTPEWASQLTGISVARIIQLAREIGNARAAWISQGWGIQRTSNGEQACRAIMMLPLMSGHIGRPGTNTGCWGGSIEYPVASFAIPNPVKTQIPTFMWSEAVARGEELTSKNAGVRNKDKLDTGIKFMWCYSSNVIGNQHADLNKTHELLQDESKCEFILVWDNHMTPSAKYADILLPDVTTVETNDLINNSYASGAYHYMVRLQNAIEPLWENRPNYDVLADIAEKLGVKEKFTEGRTYQEWIEYCYNQVKANNPALPSFAETNDMGIVDRKLPPRSAYVALEAFRQDPIANPLKTASGKIEIYSEKLMQDTEGWILPEGDRIPAIPEYCKNEEGVENVTLKEKFPLQMTGFHDKGHVHSTYFNVAMLREAIPHQFWLNPVDAAQRGLKSGDIAEIYNERGRLHIRVKVTDRVLPGVIAVPQGAWRSLDTTGVDTGGCINTLTSWHPSPFAKGNPQHTNLVEVKRA
>NZ_CP045257.1|WP_004243606.1|2437495_2438752_+|mechanosensitive-ion-channel
MQQQLLTWIRQFNEEYAQITSLLLVLLIIFVVALVLHFILHKLVLPKLSKAISKYDQKWQLSFEINKLFSRFAFLIQGVVINIQALLWMGPGKTQEILTTTAQAWCLLFGLLMIFSIMDLCLQIMRNSPSFGRLPLRGIFQSLKLVASVLIGIMIVSLLIGKSPLILLSGLGAMTAVLMLVFKDPIMGLVAGIQLSANNMISLGDWLEMPKYGADGAVVDISLTTVKVRNWDNTVTTIPTYSLISDSFKNWQAMTQSGGRRIKRSLSLDINSIYFLDQENIDKLEKAQLLEPYIKSKVGEISSYNASLCHDHQMPLNQRGMTNVGTFRAYVEAYLKNHPKIHKQMTIMVRQLAPTSEGLPIEIYAFTNTTVWVEYEAIQSDIFDHIFAILPQFGLRIHQSPTGSDVRALKFPTNIDTP
>NZ_CP045257.1|WP_017628014.1|2435258_2436896_-|hypothetical-protein
MTIETKEERLQKILTAENCKDTAKTPPKPVHPQADEPDTDPDKNTVTEIKYNQIKSSPDEPGNEVKMNGIISYEVEVKDSDLRLAQWSTNPKGILILPNNKDVYTTIVDDHKTKISLTGNRSGVASLQLILRDEDNEDNAYYAPPLQIRVTPAIPNTDCSAANCERFDDLLTINSESMQWPSKWEEVSKSFVVHLQSQEGEDMQNKEVTLVYDKDNSTLLTQPEIYNSEGELSNISKTNKYGIANFKVRFKGTEPKQIAVFYAESENSEDIDNPLKSRNYYVEMTTEKLPSPKVPATLNGILSYHSENYCVNANLILGRDISESTQVGFYFNDQLKMLPCTDKSAVSVRLENQALTNGVHYISFFTVDIFNNICFSRRERIIVDNSLTGECGKQIKNIAPKPCISVTIPQICDRYFNSVNIRLVPSLCLQIKNRVAKLDIQKMVIIFNGYTKVNSSERTLVYRSTLEIYADDPRLGDFLQDTTPSNEPISMIEISEPALESILADALPNIEVGQLGIQVMVFEKNGNCYLCGENMYTVSLRLPCA
>NZ_CP045257.1|WP_004243604.1|2434600_2435179_+|HdeD-family-acid-resistance-protein
MLDINKNNLSQLTEKLVKKQCTLMSIIAMLGLLAGIICIINPFSSGVVVSVFLGVVFFACAITSIMAAFNSRISSGWSMLITLLAGFIYLFLGYIFITDPLNGMLSLAFIIGYLFIFAGILRLVLGFKQIKDSFYGWFNILVGFLDLVLAYFLLAFGPETSITLVMALIGIQLILSSITILSIASAIKRMTR
>NZ_CP045257.1|WP_012368079.1|2433556_2434414_-|D-amino-acid-transaminase
MSEIVYLNNQFVPKEQANISVFDRGFLFADAVYEVTAVINGQLIDFEGHFQRLQRSCKALSMPFSLTKEQLKEIHRQLIDKNHLHEGLIYLQVTRGADSSRFFDFPSSLVAPTLVLFVQHSTVVNHPNASKGISVVSVEDIRWQRCDIKTVALLAACLAKHHAHQQGADDAIFIKEGYITEGSSSNFFIVNQQDEIITRPLSQDILPGITRQAIIQLAKEQKLTIIERLFTLEEAKQAKEAFISSATTLIWPVISIDNEKINQGKVGALSQRLREIYLEKAGVKP
>NZ_CP045257.1|WP_004250737.1|2432933_2433494_+|helix-turn-helix-transcriptional-regulator
MSSPSAPIEIISQSIARERKKAGLSLAEIARRAGIAKSTLSQLEAGQGNPSIETLWAICVALNIPFSQLISSPKPEVKVIRKGDGFKISAEKAYYHAFLLSSCPNGAKRDIYTVIAQPGKDRVSDPHSKNVTEHILIISGRAIVGTLDNQQELSPGDYICYPGDVTHVLRALEPDTTAVMIIEHHN
>NZ_CP045257.1|WP_017628011.1|2445672_2446329_-|DUF2612-domain-containing-protein
MNIQQFDYHSDLLQAILWQYENADKLKSLAHFKADYFHQSTVLFWQNWYRDIFNIDTANDFGLAVWGRILDVPLGIDISPSEKTKIGFGFGKKKANFNANFRRNTDYTLSLTLDQKRMLIRMRYFNLTQSPTVTNINQFLKRFFWRGESKVFVLDPFDMTYMYYVFNFNPDERLRLLLENFDLMPRPSGVGVKYRIITKKAFGYGSYRKNFLKSNFGE
>NZ_CP045257.1|WP_017628010.1|2446325_2447513_-|baseplate-J/gp47-family-protein
MADYRYINNKGVIVPDTAALRKEVEDEFRTVFGQSINLSPETPQGVLATMEIENRDAIVRNNAELANQINPDIAGGIFLDAIWALMGGERINATHSYLSNVEFMGVPGTIIPKGSQALTINGAVFETLTSLIIADTGKITGDMRAKEYGPITCGIGQLNKVASSVLGWEKVNNTTHAIIGRYAESDIKARRRRKQTLAKNTISVAQAITSSLYELAGVNSLSFRENFTDKTLTIDGISLLPHSIYVCVEGGDSHEIANVLLRTKTIGAAFNGDIEINLLEPASGQEYPIKFSRPKEVTIFCKVTVKKSSFDAQTIIPDALEKWSHGEIEGDNGLVVGRDVSPFEISAAVNAVEPHLFVTKVELSTDGKNWHVALIPIAINQIARLPKGAIQVVMV
>NZ_CP045257.1|WP_004243617.1|2447505_2447850_-|hypothetical-protein
MRTFAINQHNDLVIDAKGDLQICDNDEAVKNLCQHFIKAVRGEMLHKKDKGIPYWSATFSRQVDIPLFEMAFRQRLAEIEEVVAISHFNAFLDNGVLKYQADIRTIYGGFTLHG
>NZ_CP045257.1|WP_004243621.1|2447846_2448539_-|hypothetical-protein
MSKPNNDIASVGSLAGAFSSAFRHLMMNTDDMLPATVIDYDEKSNRAVIKPLVMMLTTDNQTISRAPVANIPVFRFGGGGFFIRAPIKAGDFGWLKANDRDISLIFQRGGLEDRPNTTRLHTFSDAMFFPDTLKGWVIDGKNIDALVIQSMDGSVCFSLHNDKVVLETPKYEINARETIFTGNVTVNGNYAVNGNSDSQGGVMRHNGKDIGSTHRHSGVQAGKDNTGSPI
>NZ_CP045257.1|WP_004243622.1|2448541_2449354_-|hypothetical-protein
MDLRRIRLGIEVGERLQWYEGLRISASGTKYANPLQNECNVTISGLNAQTRDYLLTETSPYNNNKQTRRLYLEVGRVNTGLLSLFIGDIVSAEIDSPPDVTLTLSAKTSHQSAGKIISSSGGTMRRLSEIALAIADDCGVKLDFQATDKNIANWYYCGSALHQIERLQEAGDVKAFIDDDTLFVKDDDKALKSRLRILNMNSGMIGIPKATESGLTVSYLIDSTSELGGMLRLESKLNPSLNGDYIIEQLAFSVASHEADFNYTAICKRA
>NZ_CP045257.1|WP_004243623.1|2449322_2449643_-|hypothetical-protein
MQEIPLQAIPNQRFSVAIAGVNWQLTLKVANQTMFCDIEREGEILITGMRLVANTPIIPYRYLNQGINLMFLTEHDALPWYEEFTKTQSLVYWSEEDGSSTNKARN
>NZ_CP045257.1|WP_004250719.1|2449655_2450144_-|hypothetical-protein
MITEVRIFDLASFTTLFDSVNPTQVTIDDSHQAITFTVENGESRSDHVVINPISISISLLLTGDIANAYATIKQLYDENTLVGIQTRVSTYQPMLLESLSHDEDPSKVDAIELKLKFIEWKSIEPEYNKKSAKSTKKPKQSSTINRGNVKSKKSMPIGKKQG
>NZ_CP045257.1|WP_017628009.1|2450146_2452450_-|hypothetical-protein
MSLLPVFSQVLTLDAEVSDNALNNIRKSTNEILEEMKKIEQGASAGINRFFAFVQEIATSFNELSLEPEINLSVDNQEVIQASETVENSIQKIVKTALSSTQEFDTFLQNILTGLTSLSLDEPINIEINSGETQEKILSITSSIDALKDAMSVLNYTRNLLSNDVDSDASHLANLNAEYQAMEDQLASLNNELTLLTEAEKKNKENKLVIDEVIKNLGADYDQFISTMQTQGIKAAIEEAQAQRRLSSSVDETGKSYQQTVDKMKDFILNAIGATDIMGTLQKVFSASLERSQEIESLDKLSKKMGIAAIDIDAFSGAMAAIGGTKEAAQADLAAMATAFDDTQDPIEQLLQVADNVKNMSFDDAQKELEKLGVVDDKTIELMMKGRQELERTMGVQKQFSGINDDSIESAIQLNATIHKFSQLAAQFKNNFLDMIIPTLAKGMEWFDKLVDFCVKNKDIVISFFSAIGAAVAIYYLPVMISAAASTLAMALPIIAIATVIGLLGVAFKLVYDDIMNFINGNDSMIGRILEKYPVLKSVIMTIWQAWQSFFEYLKEAVTVVADFVIAAWDLISNSFNQFIQTLEIGINNLIAWGQSIIDIFIFVSDSVVSLFEWMWGCVEKILDFVDEKINLIQDIWQSAKSFFGMDDEEKEIRVVQKVERRLTNEGELDYILPQSQTATRYYSPMQEVKSLNNGLAISSNNSLNPMTSQMISNQSSIKNESNVQIGEIKIETQATNGAEVVKEIKKSYTEQEAKNISQNHSSGWRV
>NZ_CP045257.1|WP_004243627.1|2452532_2452991_-|hypothetical-protein
MLIKPKEITVIDSDRQQHTFIISRLPATIGREILAKYPLSNAPKIGDYEVSKEAMLKMMAYVAVEKEGQEIYLKTSTLIDNHVPDGEALIRLELEMLKYNTSFFGNGGSQNFLQYLLGKLSGSLPSIIKTLMASLPSSSQPASPLSQNSKQP
>NZ_CP045257.1|WP_012368088.1|2453050_2453503_-|hypothetical-protein
MNDISATGLSLIIQASKTFPAGIPITTFSDEGDPLDLPTVNITQTAVDINGNLVSWSSPTPQTVTINVLAGSEEDENLAILFDANTARRGRRPASDVITLVASYGDGSITTARNGRITDGCRGNSVAGAGRLKSKQYTFIFQDFDRVRAR

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Crispr_ID: NZ_CP045257_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045257_2

2522506-2522901

TypeI-E

I-E:NA

Consensus_repeat	Method
CGGTTCATCCCCGTATACACGGGGAACAC	CRISPRCasFinder
GTTCATCCCCGTATACACGGGGAACAC	PILER-CR
CCCGTATACACGGGGAACAC	CRT

6 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP045257_2

>merge|NZ_CP045257|2|2522506-2522901|CRISPRCasFinder,PILER-CR,CRT
TAATTTATCCCCGTATACACGGGGAACACTAGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGGTTCATCCCCGTATACACGGGGAACACGCGTAGTTGCGGATCATTTTGGTACCAAACCCTCGGTTCATCCCCGTATACACGGGGAACACTAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATTCCCGTATACACGGGGAACACGCGTAGTTGCGGATCATTTTGGTACCAGACCCTCGGTTCATCCCCGTATACACGGGGAACACTAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATTCCCGTATACACGGGGAACACGTGGTCCATGGGGCGCTGCGATAGGTGGCGGTCGTTCATTCCCGTATACACGGGGAACAC

>NZ_CP045257|2|2|2522506-2522901|CRISPRCasFinder
TAATTTATCCCCGTATACACGGGGAACAC	TAGAAACTGCTACCGGTGCGCGTCTGCAGTCT
CGGTTCATCCCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAAACCCT
CGGTTCATCCCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAA
CGGTTCATTCCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAGACCCT
CGGTTCATCCCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAA
CGGTTCATTCCCGTATACACGGGGAACAC	GTGGTCCATGGGGCGCTGCGATAGGTGGCGG
TCGTTCATTCCCGTATACACGGGGAACAC

>NZ_CP045257|2|1|2522509-2522901|PILER-CR
TTTATCCCCGTATACACGGGGAACACT	AGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGG
TTCATCCCCGTATACACGGGGAACACG	CGTAGTTGCGGATCATTTTGGTACCAAACCCTCGG
TTCATCCCCGTATACACGGGGAACACT	AAGCCAGAATGACAAAGTGAAAGCGATACAACGG
TTCATTCCCGTATACACGGGGAACACG	CGTAGTTGCGGATCATTTTGGTACCAGACCCTCGG
TTCATCCCCGTATACACGGGGAACACT	AAGCCAGAATGACAAAGTGAAAGCGATACAACGG
TTCATTCCCGTATACACGGGGAACACG	TGGTCCATGGGGCGCTGCGATAGGTGGCGGTCG
TTCATTCCCGTATACACGGGGAACAC

>NZ_CP045257|2|1|2522515-2522901|CRT
CCCGTATACACGGGGAACAC	TAGAAACTGCTACCGGTGCGCGTCTGCAGTCTCGGTTCATC
CCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAAACCCTCGGTTCATC
CCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATT
CCCGTATACACGGGGAACAC	GCGTAGTTGCGGATCATTTTGGTACCAGACCCTCGGTTCATC
CCCGTATACACGGGGAACAC	TAAGCCAGAATGACAAAGTGAAAGCGATACAACGGTTCATT
CCCGTATACACGGGGAACAC	GTGGTCCATGGGGCGCTGCGATAGGTGGCGGTCGTTCATT
CCCGTATACACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045257.1\|WP_012368105.1\|2511241_2511904_-\|sugar-phosphatase	unknown	unknown	gnl\|CDD\|183215
NZ_CP045257.1\|WP_004247166.1\|2517722_2517866_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP045257.1\|WP_004243712.1\|2512573_2513029_-\|DUF412-domain-containing-protein	unknown	unknown	gnl\|CDD\|179338
NZ_CP045257.1\|WP_004247166.1\|2518262_2518406_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP045257.1\|WP_023843594.1\|2511938_2512433_-\|YfbU-family-protein	unknown	unknown	gnl\|CDD\|180087
NZ_CP045257.1\|WP_017627991.1\|2524179_2524857_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_CP045257.1\|WP_017627993.1\|2522959_2523256_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP045257.1\|WP_004243721.1\|2532764_2534021_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP045257.1\|WP_004243716.1\|2513420_2514623_+\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP045257.1\|WP_017627992.1\|2523258_2524179_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP045257.1\|WP_017627987.1\|2527281_2528880_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP045257.1\|WP_012368108.1\|2534031_2534319_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP045257.1\|WP_017627996.1\|2514700_2516845_+\|phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|235537
NZ_CP045257.1\|WP_017627986.1\|2528876_2531570_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP045257.1\|WP_017627990.1\|2524856_2525594_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP045257.1\|WP_073969838.1\|2517181_2517325_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	unknown	unknown	gnl\|CDD\|366840
NZ_CP045257.1\|WP_017627994.1\|2521113_2522337_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP045257.1\|WP_017627989.1\|2525606_2526641_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP045257.1\|WP_017627988.1\|2526707_2527295_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045257.1\|WP_017627995.1\|2518636_2521036_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418

Protein	Function_ID	Function_description	E-value
NZ_CP045257.1\|WP_012368105.1\|2511241_2511904_-\|sugar-phosphatase	gnl\|CDD\|183215	PRK11587, PRK11587, putative phosphatase; Provisional.	1.76531e-142
NZ_CP045257.1\|WP_004247166.1\|2517722_2517866_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP045257.1\|WP_004243712.1\|2512573_2513029_-\|DUF412-domain-containing-protein	gnl\|CDD\|179338	PRK01816, PRK01816, hypothetical protein; Provisional.	7.72253e-90
NZ_CP045257.1\|WP_004247166.1\|2518262_2518406_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.93268e-09
NZ_CP045257.1\|WP_023843594.1\|2511938_2512433_-\|YfbU-family-protein	gnl\|CDD\|180087	PRK05445, PRK05445, YfbU family protein.	1.95663e-106
NZ_CP045257.1\|WP_017627991.1\|2524179_2524857_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.67839e-57
NZ_CP045257.1\|WP_017627993.1\|2522959_2523256_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP045257.1\|WP_004243721.1\|2532764_2534021_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP045257.1\|WP_004243716.1\|2513420_2514623_+\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP045257.1\|WP_017627992.1\|2523258_2524179_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP045257.1\|WP_017627987.1\|2527281_2528880_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.46932e-138
NZ_CP045257.1\|WP_012368108.1\|2534031_2534319_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP045257.1\|WP_017627996.1\|2514700_2516845_+\|phosphate-acetyltransferase	gnl\|CDD\|235537	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed.	0
NZ_CP045257.1\|WP_017627986.1\|2528876_2531570_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.18125e-141
NZ_CP045257.1\|WP_017627990.1\|2524856_2525594_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP045257.1\|WP_073969838.1\|2517181_2517325_+\|type-I-toxin-antitoxin-system-Hok-family-toxin	gnl\|CDD\|366840	pfam01848, HOK_GEF, Hok/gef family.	5.05999e-08
NZ_CP045257.1\|WP_017627994.1\|2521113_2522337_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP045257.1\|WP_017627989.1\|2525606_2526641_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.02527e-121
NZ_CP045257.1\|WP_017627988.1\|2526707_2527295_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.38781e-22
NZ_CP045257.1\|WP_017627995.1\|2518636_2521036_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0

>NZ_CP045257.1|WP_017627994.1|2521113_2522337_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP045257.1|WP_017627995.1|2518636_2521036_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRKKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIVTGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDNQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP045257.1|WP_004247166.1|2518262_2518406_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP045257.1|WP_004247166.1|2517722_2517866_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIGLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP045257.1|WP_073969838.1|2517181_2517325_+|type-I-toxin-antitoxin-system-Hok-family-toxin
MTKLALIRLITVCITVLCFTLLRHERLCSFNISSGNTLVQANLSCDK
>NZ_CP045257.1|WP_017627996.1|2514700_2516845_+|phosphate-acetyltransferase
MSRTIMLVPTDTRVGLTSVSLGVIRSMEQKGVRLSVFKPIAQPRVKGALDQTTAIIRSHSTIQSAEPLNMDYVESLLSSNKKDVLMEEIVARYHENTADAEVVLIEGLVPMRKHPFAQSLNYEIAKTLGAEIVFVTALGNNTAEQLKERIEFARAEFGGVKNQNITGVIVNKLNAPVDDQGRTRPDLSEIFDDSSKAIISNVDLNTIEKNSPLPLLGCIPWNFDLIATRATDMAKHLNATIINKGDIETRRIKSVTFCARSIPHMLEHFRPGSLLVTSADRPDVLVSACLAAMNGVEIGAILLTGGYQIDAPIKQLCERAFETGLPIFMVNSNTWQTSLNLQSFSLEVPADDHERIEKIQNYVAQHINNQWIDSLTANSERPNRLSPPAFRYQLTELARKAKKRIVLPEGDEPRTVKAASICAERGIATCVLLGDPEEIRRVAAAQGVELGTGIELVNPKEVREIYVPRLVELRKNKGMTEVVAREQLEDNVVLGTLMLEKGVVDGLVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQLAEIAIQSADSAKAFGIDPRVAMISYSTGNSGAGSDVEKVREATRLAQEKRPDLIIDGPLQYDAAVMADVAKSKAPNSPVAGKATVFIFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQASQQENA
>NZ_CP045257.1|WP_004243716.1|2513420_2514623_+|acetate-kinase
MSSKLVLVLNCGSSSLKFAIINPENGEEFLSGLAECFNLPEARLKWKMDGQKHEAALGAGAAHSEALNFIVNTILAEKPELSQQIAAIGHRIVHGGEKFTKSVVITDEVIKGIEAAIPFAPLHNPAHLIGIEEARKAFPHLINKMVAVFDTAFHQTMPEEAYLYALPYSLYKDHSIRRYGAHGTSHFFVSREAAKMLNKPVDELNVITCHLGNGGSVSAIVNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIVFHLHDTLGMSVEDINKLLTKESGLLGLTEVTSDCRYVEDNYETKADAKRAMDVYCHRLAKYIGSYCALMEGRLDAIIFTGGIGENAAMVRELSLKKLALLGFEVDHQRNLDARFGKSGTITTDNSRLAVVIPTNEELVIAQDASRLTA
>NZ_CP045257.1|WP_004243712.1|2512573_2513029_-|DUF412-domain-containing-protein
MNEPTVTPPGFFKKLRLGNEYLKTWPVEKQLAPVFPENRMIKATRFGIRYMPPIAIFTLTWQIALGGDLGPAITTALFACSLPMQGLWWLGKRAATPLPAVLLNWFYEIREKFEQAGIALAPVEKTPTYLSLAHLLKRAFKQLDRSFLDDV
>NZ_CP045257.1|WP_023843594.1|2511938_2512433_-|YfbU-family-protein
MEMTHAQRLILSNQYKMMTMMDPDNAERYRRYQTIIERGYGLQLRELDRDFDEMSEETCRTIINIMEMYHALQVSRENLKSPEMPDARRVAFMGFDAATESRYLSYVRFMVNTEGRYTHFDSGSHGFNSQTPMWEKYQRMLAVWLACPRQYHLSSVEIQQILNA
>NZ_CP045257.1|WP_012368105.1|2511241_2511904_-|sugar-phosphatase
MTITCKGFLFDLDGTLVDSLPVVEYCWALFGERVGVSTQEINNYIHGKPAIESIRHFMPNATQAQIEETFRWLEKLEATQTEGLAPLPGAIELINRLNDLAIPWAIVTSGTVPIASTRQSVTGIPEPKHWVTAECITQGKPNPEPYLLGAKKLGLAPEECVVFEDAAAGIYSGLDAGCQVIAVHAPISLPRRNEIDLIIDSLNDLQIDKENQQVVIKHKC
>NZ_CP045257.1|WP_017627993.1|2522959_2523256_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP045257.1|WP_017627992.1|2523258_2524179_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP045257.1|WP_017627991.1|2524179_2524857_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNFFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRQRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP045257.1|WP_017627990.1|2524856_2525594_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP045257.1|WP_017627989.1|2525606_2526641_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKKWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP045257.1|WP_017627988.1|2526707_2527295_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWAIIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP045257.1|WP_017627987.1|2527281_2528880_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLRSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP045257.1|WP_017627986.1|2528876_2531570_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDVGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTEAVYRSPGRLWLTLRSLTRLGEINMPKDARKLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKITKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP045257.1|WP_004243721.1|2532764_2534021_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP045257.1|WP_012368108.1|2534031_2534319_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL

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Crispr_ID: NZ_CP045257_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045257_3

2531815-2532636

TypeI-E

I-E

Consensus_repeat	Method
CGGTTCATCCCCGTGCATACGGGGAACAC	PILER-CR
CGGTTCATCCCCGTGCATACGGGGAACAC	CRISPRCasFinder
CGGTTCATCCCCGTGCATACGGGGAACAC	CRT

13 spacers

cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2

The CRISPR arrays of NZ_CP045257_3

>merge|NZ_CP045257|3|2531815-2532636|PILER-CR,CRISPRCasFinder,CRT
CGATTCATCCCCGTGCATACGGGGAACACCTCATTGTTCATTGCCTCGTCCTCAGCCCATTCGGTTCATCCCCGTGCATACGGGGAACACTGGTGTGTACATGTGTTTGGTCATCACGTTCGCGGTTCATCCCCGTGCATACGGGGAACACTCAGCCATACAGTCAGAAAGTCTTTGAAGATGCGGTTCATCCCCGTGCATACGGGGAACACGCCTCGGATATCATTGCGAACAATCATTTCACCGGTTCATCCCCGTGCATACGGGGAACACCTGCAATCAATGCAACCTGTGAATATTCGATACGGTTCATCCCCGTGCATACGGGGAACACCTGCAATCAATGCAACCTGTGAATATTCGATACGGTTCATCCCCGTGCATACGGGGAACACTGCAAATAAGATGGCAAAGCGGAACGGTTCCCCGGTTCATCCCCGTGCATACGGGGAACACATAACCAAGCCTTAAAAGGTCGTCTGCGCATTCGGTTCATCCCCGTGCATACGGGGAACACAAAGAAATCCCTGAACAAGATGCGGTTTACACCGGTTCATCCCCGTGCATACGGGGAACACAGTCGAACACCATTTAATAAAACATTGTAAAACGGTTCATCCCCGTGCATACGGGGAACACTAAACGGTTATAAACATCTAAAGTCATTAACGCGGTTCATCCCCGTGCATACGGGGAACACTTTTTCTGTTTTGCTGAGAGAAACGTAATCAACGGTTCATCCCCGTGCATACGGGGAACACAACAGAAATAACAGCTGCGATACGTTCTATTTCGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP045257|3|2|2531815-2532636|PILER-CR
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP045257|3|3|2531815-2532636|CRISPRCasFinder
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC

>NZ_CP045257|3|2|2531815-2532636|CRT
CGATTCATCCCCGTGCATACGGGGAACAC	CTCATTGTTCATTGCCTCGTCCTCAGCCCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	TGGTGTGTACATGTGTTTGGTCATCACGTTCG
CGGTTCATCCCCGTGCATACGGGGAACAC	TCAGCCATACAGTCAGAAAGTCTTTGAAGATG
CGGTTCATCCCCGTGCATACGGGGAACAC	GCCTCGGATATCATTGCGAACAATCATTTCAC
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	CTGCAATCAATGCAACCTGTGAATATTCGATA
CGGTTCATCCCCGTGCATACGGGGAACAC	TGCAAATAAGATGGCAAAGCGGAACGGTTCCC
CGGTTCATCCCCGTGCATACGGGGAACAC	ATAACCAAGCCTTAAAAGGTCGTCTGCGCATT
CGGTTCATCCCCGTGCATACGGGGAACAC	AAAGAAATCCCTGAACAAGATGCGGTTTACAC
CGGTTCATCCCCGTGCATACGGGGAACAC	AGTCGAACACCATTTAATAAAACATTGTAAAA
CGGTTCATCCCCGTGCATACGGGGAACAC	TAAACGGTTATAAACATCTAAAGTCATTAACG
CGGTTCATCCCCGTGCATACGGGGAACAC	TTTTTCTGTTTTGCTGAGAGAAACGTAATCAA
CGGTTCATCCCCGTGCATACGGGGAACAC	AACAGAAATAACAGCTGCGATACGTTCTATTT
CGGTTCATCCCCGTGCATACGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045257.1\|WP_004243721.1\|2532764_2534021_-\|PTS-ascorbate-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|236502
NZ_CP045257.1\|WP_017627987.1\|2527281_2528880_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09729_cas8e_CAS-I-E	gnl\|CDD\|187860
NZ_CP045257.1\|WP_017627985.1\|2534348_2534792_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP045257.1\|WP_017627991.1\|2524179_2524857_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	pfam08798_cas6e_CAS-I-E:CAS-IV	gnl\|CDD\|215025
NZ_CP045257.1\|WP_017627993.1\|2522959_2523256_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP045257.1\|WP_004243729.1\|2538404_2538986_-\|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl\|CDD\|235677
NZ_CP045257.1\|WP_004243730.1\|2539107_2540625_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP045257.1\|WP_017627992.1\|2523258_2524179_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP045257.1\|WP_012368108.1\|2534031_2534319_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99905
NZ_CP045257.1\|WP_004243731.1\|2540655_2541147_-\|colicin-V-production-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP045257.1\|WP_017627983.1\|2537479_2538385_+\|TIGR01777-family-protein	unknown	unknown	gnl\|CDD\|224015
NZ_CP045257.1\|WP_017627986.1\|2528876_2531570_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP045257.1\|WP_017627990.1\|2524856_2525594_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187886
NZ_CP045257.1\|WP_017627984.1\|2536800_2537415_+\|glutathione-S-transferase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|172475
NZ_CP045257.1\|WP_017627994.1\|2521113_2522337_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|183984
NZ_CP045257.1\|WP_017627989.1\|2525606_2526641_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP045257.1\|WP_004243725.1\|2535018_2536065_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP045257.1\|WP_017627988.1\|2526707_2527295_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09731_cse2gr11_CAS-I-E	gnl\|CDD\|187862
NZ_CP045257.1\|WP_017627995.1\|2518636_2521036_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	unknown	unknown	gnl\|CDD\|274418
NZ_CP045257.1\|WP_004243726.1\|2536061_2536604_-\|NUDIX-hydrolase-YfcD	unknown	unknown	gnl\|CDD\|185291

Protein	Function_ID	Function_description	E-value
NZ_CP045257.1\|WP_004243721.1\|2532764_2534021_-\|PTS-ascorbate-transporter-subunit-IIC	gnl\|CDD\|236502	PRK09410, ulaA, PTS system ascorbate-specific transporter subunit IIC; Reviewed.	0
NZ_CP045257.1\|WP_017627987.1\|2527281_2528880_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|187860	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain; subunit of the Cascade complex; signature gene for I-E subtype; also known as Cse1/CasA/YgcL family.	3.46932e-138
NZ_CP045257.1\|WP_017627985.1\|2534348_2534792_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.97304e-43
NZ_CP045257.1\|WP_017627991.1\|2524179_2524857_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|215025	smart01101, CRISPR_assoc, This domain forms an anti-parallel beta strand structure with flanking alpha helical regions.	5.67839e-57
NZ_CP045257.1\|WP_017627993.1\|2522959_2523256_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	1.37501e-60
NZ_CP045257.1\|WP_004243729.1\|2538404_2538986_-\|UbiX-family-flavin-prenyltransferase	gnl\|CDD\|235677	PRK06029, PRK06029, UbiX family flavin prenyltransferase.	4.72059e-121
NZ_CP045257.1\|WP_004243730.1\|2539107_2540625_-\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP045257.1\|WP_017627992.1\|2523258_2524179_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.56752e-144
NZ_CP045257.1\|WP_012368108.1\|2534031_2534319_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99905	cd05563, PTS_IIB_ascorbate, PTS_IIB_ascorbate: subunit IIB of enzyme II (EII) of the L-ascorbate-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is an L-ascorbate-specific permease with two cytoplasmic subunits (IIA and IIB) and a transmembrane channel IIC subunit. Subunits IIA, IIB, and IIC are encoded by the sgaA, sgaB, and sgaT genes of the E. coli sgaTBA operon. In some bacteria, the IIB (SgaB) domain is fused C-terminal to the IIA (SgaT) domain. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include ascorbate, chitobiose/lichenan, lactose, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	4.22877e-30
NZ_CP045257.1\|WP_004243731.1\|2540655_2541147_-\|colicin-V-production-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	1.66712e-99
NZ_CP045257.1\|WP_017627983.1\|2537479_2538385_+\|TIGR01777-family-protein	gnl\|CDD\|224015	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only].	6.15076e-158
NZ_CP045257.1\|WP_017627986.1\|2528876_2531570_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	5.18125e-141
NZ_CP045257.1\|WP_017627990.1\|2524856_2525594_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187886	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	2.81256e-48
NZ_CP045257.1\|WP_017627984.1\|2536800_2537415_+\|glutathione-S-transferase-N-terminal-domain-containing-protein	gnl\|CDD\|172475	PRK13972, PRK13972, GSH-dependent disulfide bond oxidoreductase; Provisional.	3.08334e-95
NZ_CP045257.1\|WP_017627994.1\|2521113_2522337_-\|alanine-racemase	gnl\|CDD\|183984	PRK13340, PRK13340, alanine racemase; Reviewed.	0
NZ_CP045257.1\|WP_017627989.1\|2525606_2526641_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	9.02527e-121
NZ_CP045257.1\|WP_004243725.1\|2535018_2536065_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	2.10508e-82
NZ_CP045257.1\|WP_017627988.1\|2526707_2527295_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187862	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	2.38781e-22
NZ_CP045257.1\|WP_017627995.1\|2518636_2521036_+\|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family	gnl\|CDD\|274418	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.	0
NZ_CP045257.1\|WP_004243726.1\|2536061_2536604_-\|NUDIX-hydrolase-YfcD	gnl\|CDD\|185291	PRK15393, PRK15393, NUDIX hydrolase YfcD; Provisional.	9.13373e-128

>NZ_CP045257.1|WP_017627986.1|2528876_2531570_-|CRISPR-associated-helicase/endonuclease-Cas3
MDKDYYSYWGKFKSENNHEYYHLLPYHSLDVAAVGMILFPENSKIIKDISTFLQIHPKEFSKLFLLLLSLHDVGKFSSSFQYINPNIIDKLKVPESRFSYDGNNYRHDRLGYYFWRKIKNTIFSSIIISNADYKERKISDGFWIIFETALGHHGKPINKNNIDESIENYIHKDNDKAAIDFTLDILKLFSPKLSVENFYDKGWKERLKQISWLLAGMVTLSDWIGSNRDYFPYYKKKIPLSEYWFLALNRAKKAVLSSGFNRNYQISPFISVEYHFGYKPTPLQQWAEKVTINEHPQLFILEDTTGSGKTEAALTLAHRLMEVDAADGFYFGLPTQATSNAMFLRIINHYKKIFDEKKEVPSIVLAHSASNMNEQFTKIIRDGNERYNISDNTASAQCYQWLSDSRKKALLATIGVGTLDQALLSMLPRRHQSLRLLGLNRKIIIFDEIHSADEFMFEIIEKLLSTHLHQGGSVILLTATLSLKQRKRIIDSWFNAFDQISPEIESKSFPLATHLTCFPKVIKKEYPLKSRNQVSRKVKVEIINKEEQCIDIIISAINNGNCVVWIRNTVNDAIKSYYDIKKRLSKDNNCLLFHSRFNLKDRKIREEQVLKYFGKNSTAQQRKGTVLIATQVFQESLDADADIMISDICPIDDLIQRSGRLHRHTRTKYGDYTSETIDKRRPPILYVHAPLFIETPSSCWLTEQFSSTEAVYRSPGRLWLTLRSLTRLGEINMPKDARKLIESVYSDNAYNEIPQSLIQKENNDIGEKKARVSKAKIQLLKITKGYSEESSEFWTEDHYDISTRYSDIEMVNILLLKKIKDNYVPWIEDSHFSIALSTVKISKKKYADKLVSVPQEVIDTINKQYPQARYLQLWIPDEDQYYQYDHLIGFCERQELS
>NZ_CP045257.1|WP_017627987.1|2527281_2528880_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MNIINQPWLPFRFRDGEIKTLPISAISHPDIIDFSLNRADFKGAAYQFAIGLLQTIFAPEDEDEWEEYFETPPSSKKLQSAFDKVAHAFNIMGDGPLFMQDFSTLEEQKNIPIAQLLIDAPGENGIKQNTDHFIKQGIADVMSLEMAVLALFTLQINAPSGGKGHLVSLRGGGPLTTLVYPAEENSTLWQKLWLNVINREFWEYDEPNFDDGSVFPWLIPLNLKEGKGEKVSPDDVHPLYMYWAMPRRIRLKVENKSVTCQISDMKSNFSVKYYVTKNYGLDYQEGWLHPLTPYYWDPKKPEMFPNSIKGRQGGIHYNLWDRLFLSSNENGQKSATVVSHYLKLYQLLEFTRKPRLLIFGYDMDNMKPRGWYNLEMPIFHVKDEYNNKIINEIKIIQKLTIDCLRSVKEQVKKAWFSSPKDMKGDISFIDLTFWQRSENIFFEVVQNIIVQIQKNDFLTHEQAKKWLNSIRKISISIFDEYALSALGTQKSVSGCIKARNGLIKDLYSNKRIKKFAEDFKITKENGEQYGIL
>NZ_CP045257.1|WP_017627988.1|2526707_2527295_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MGSYKSKNITLYNYPELKINVLRWWESLFLSPNELSKKGILPAPNRYKSELKRCDSITAIMLTEGFRALWLSFPVDLINNATTEDIERWAIIVAILVYITQDSEKHFATIAGEKDESKKSCISESRFLQLQSSRTYDEFIRRLRRILIQIKGKSSVLSMCKDIEKWVLEKQRFSSIQTNKQIIIEWAMKYYQAAI
>NZ_CP045257.1|WP_017627989.1|2525606_2526641_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSQFIQLHILTSYAPSNLNRDDLGRPKTAIMGGFERLRISSQSLKRHWRTSELFNIALSGNIGIRTKKFGLQLYDALIEGGVSEKNAKKWVGLIIEQYGKIKKDSIETEQLVHISHLEKSLAFDLINLLIKEQREPTKQELESLKTINTSVDIALFGRMLASAPKYNIEAACQVAHAISVHSTVIEDDYFTAVDDLNNGETDTGSAHIGEAGFAAALFYSYICINKTQLIESLDGNEELANKAIQALTEVAIKVSPTGKQNSFASRAYASYVLAEKGSYQPRSLSVAFLKPIDDEDMENAAINALKFRMENFDKVYGTCAESRYQLNAVQGEGSLSGLLQFVAE
>NZ_CP045257.1|WP_017627990.1|2524856_2525594_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MAQYLVFRLYGPLASWGLPAVGGDRQTGIAPSRSAILGLLSASLGINRKDESKLLQLQQSVLVATKQLVPSMLLRDFHTAQVPSKRKNITHPTRRSELAEKDQNTILSSRDYRCDAIWIIAIKLTGHSQYTLEQLKNALLKPVYILSLGRKSCPLSLPMMPKIVEVEQLKEALDTQFPYITTSDKADSYWFHSDGWVTYFWEGNYQDIKGENIMTLYPWDDPINRQHWQFRQRKMYQMSVKRESE
>NZ_CP045257.1|WP_017627991.1|2524179_2524857_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSRISIDYSADYLHSLLANKLPDGYTIHQLLWRLFTEEKERSFLYRLEIGKNGKPIFYILSSIAPTTKNNFFKIETKPFLPKLVKKMKLAFSLRANPTVCITDKEGKRQRHDVLMHAKKQAQLDGKDYSHDDIHHLMQQAALNWISSDDRLNKWGISLTQLPDIKAYTPERIKKPSGKIMSFSSVDYQGVLTIEEPHLFWQQYQQGFGRAKAFGCGLMLIRNI
>NZ_CP045257.1|WP_017627992.1|2523258_2524179_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MAFIPLRPIPIKDRHSMIFIGMGRIDVKDGAFVVIDEINGERMLIPVGSLACILLEPGTRISHAAVKLAATVGTLLIWVGEAGVRLYSVGQPGGARSDKLLYQAKLALDNDLRLKVVRKMFELRFGESAPLKRSVDQLRGIEGARVRKQYQMLAKKFKIDWKGRRYDPKDWEAGDIINRCISAATACLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPVAFKVASYKAIAPDREVRIACREAFRKYQTLNKLIPLIEEVLSAGEITPPEPPIDAQPPAIPQAHPFGDEGHREK
>NZ_CP045257.1|WP_017627993.1|2522959_2523256_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMIVVVTEAVPPRLRGRLAVWLLEVRAGVYVGNVSARIREMIWQQINEFAEDGNVVMAWGTNTESGFDFQTYGENRREPIDFDGLRLVLFKPYKEDV
>NZ_CP045257.1|WP_017627994.1|2521113_2522337_-|alanine-racemase
MSLAIRYLALLPLFVITACQQPVNYNPPATQVAQAQPAIVNNSWIEISRSALDFNVKKVQSLLGKQSSLCAVLKGDAYGHDLSLVAPIMIENNVQCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMAQATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLEKAKQISQLANLKVVGIMSHYPEEDANKVREDLARFKQQSQQVLEVMGLERNNVTLHMANTFATITVPESWLDMVRVGGIFYGDTIASTDYKRVMTFKSNIASINYYPKGNTVGYDRTYTLKRDSVLANIPVGYADGYRRVFSNAGHALIAGQRVPVLGKTSMNTVMVDITSLNNIKPGDEVVFFGKQGNSEITAEEIEDISGALFTEMSILWGATNQRVLVD
>NZ_CP045257.1|WP_017627995.1|2518636_2521036_+|membrane-bound-PQQ-dependent-dehydrogenase,-glucose/quinate/shikimate-family
MKISHFYRWIVFIILTILALYFTVLGGYLVSLAGSPFYLFTGVMLLIIAACFLSRKKSTLLLFNFLFLITIVWSIWESGFDFWALAPRLDIIFILGLLLIPFTLNNNVYTCRTNKIGLFTLLATTLIIILGSSLTDPHAINGQFTQQQPTNSISPIGVNDNDWPAYGRTQAGIRYSPLTQINSDNVDKLVEKWTFHTGDEKRANDAVEITNEVTPIKIEDNLFLCTPHQYLISLDPATGKEKWRFDSKLQYNKSFQHMTCRGVAYYNQNNSAEFAKSLDVRQPSISDECPEKVFLPVNDGRLIAVNAQTGNACRDFGQNGEINLLASMPYAYLGGYNPTSPPIVTGNTIIIGGSVTDNLSTQEPSGVIRGYDVNSGKLIWVFDTGAEDPNAMPGKETQFVHNSPNAWAPLAYDAQTDVVYIPTGVGTPDIWGGDRHPLKERYANSVLALKGSTGELLWHFQTTHHDLWDMDVPSQPSLVDIKTDKNETIPAIYIVTKTGNVFVLDRRDGTPIVPVTEKPVPTSVKYGPQTQGEHYSPTQPFSALNLAPKNKLQGSDMWGGTMADQLLCRIAFHQLNYEGIYTPPSENGTLVFPGNLGIFEWGGISVNQDRQVAVMNFITLPFISKLYLKDPQDNQAIDAGHGEQGLQPMTGTPYSVDIHPFLSPLGLPCKQPPWGFVAGVDLTKNELVWQQRFGTIRDSLPNLVELPPLKIGVPGLGGAISTAGNVMFVAASQDNYIRAFNVTNGKMLWEARLPAGGQATPMTYSIGGKQYVVIMAGGHGSFGTKMGDSLVAYGLPDNL
>NZ_CP045257.1|WP_004243721.1|2532764_2534021_-|PTS-ascorbate-transporter-subunit-IIC
MDFFRFLMSDVLSEPAILVGLIALIGLIAQKKPATECIKGTVKTIMGFVILGAGAGLVINSLGDFSTIFQHAFGIQGVVPNNEAIVSIAQKSFGKEMALIMFFAMLINILIARLTPWKYIFLTGHHTLFMSMMVAVILATAGLEGAVLVAVGSLVVGVSMVFFPAIAHPYMKKITGSDDVALGHFSTISYVVSGFIGSKFGNKAHSTEEMNVPKSLLFLRDTPVAIAFTMGIIFIITCLFAGDTFVREVSGGKNWFMFSLMQSITFAAGVYIILQGVRMVIAEIVPAFKGISDKLVPNAKPALDCPVVFPYAPNAVLVGFLSSFAAGVIGMFILYALDWTVIIPGVVPHFFVGATAGVFGNATGGRRGAILGAFAQGLLITFLPVFLLPVLGDIGIANTTFSDADFGVIGILLGIIVR
>NZ_CP045257.1|WP_012368108.1|2534031_2534319_-|PTS-sugar-transporter-subunit-IIB
MKITVVCGNGLGSSLMMEMSIKSILKDLAVNADVDHVDLGSAKGTPSDIYVGTRDIAEQLNAQAVNGKIVSLDNMIDKVAMKEKLSTALRELGAL
>NZ_CP045257.1|WP_017627985.1|2534348_2534792_-|PTS-sugar-transporter-subunit-IIA
MLKTLLTPDVVQVIPQVKDWREAIKIACQPLIDKGCIEPRYVDAIYKSHEQIGPYYVLGPGIAMPHARPEEGVNQLSLALTIIEKGVEFGANENDPVKLLIVLAATDNDSHINAIVKLAELFDNQDDIDTLLQAKSKAEVLAVINHY
>NZ_CP045257.1|WP_004243725.1|2535018_2536065_+|LacI-family-DNA-binding-transcriptional-regulator
MIKTRKRRNTGRVTLQEVAKHAGVGSMTVSRALRTPELVSDKLREKVNQAVAELGYIPNASAGALASAQSHIIAVLLPSFTDKASADFMQSLQQILSRHHYQILVGCYEYQLHKATDVINMLLQSNPAALVAFGSQLSDVQFLHISNANVPVVSVASQSNEQSAISIDCGYEKAAFDLTHYLIQQGKRCVGYVGALQGQRLHHQQITGWSRALLKNYLNAEQSVTTPDPASMAYGRQALTEILLRQPELDAVICSHESIALGMMFECQRRLIKIPQDLAIACLEGSENSAQIAPSLTSIHFNYHKIGKEAGKHLIALLQHLRDEVDNAMFENTVINYAYRLELGQSTP
>NZ_CP045257.1|WP_004243726.1|2536061_2536604_-|NUDIX-hydrolase-YfcD
MEQENTAVVEWVDIVDEKNEVVAQATRQQMRAENLRHRATYIVVHDGMGKILAQRRTETKDFYPGWLDATAGGVVQQGENALESARREAEEELGIAGVPFAEHGQFYYDDESCRVWGSLFSCVSHGPFALQPEEIEEVCWLTPLEITERCDEFTPDSLKALSLWLTRNNSTRLDTKETTD
>NZ_CP045257.1|WP_017627984.1|2536800_2537415_+|glutathione-S-transferase-N-terminal-domain-containing-protein
MIDLYYANTPNGQKITLFLEEVAMPYTLHHVDIGKGDQFKPEFLAISPNNKIPAIVDNAPADGGEPLSIFESGAILIYLAEKSGKLLSHDLREKMTQLQWLFWQVGGFGPILGQNHHFTRYAPEKVPYAINRYTKETERLYQVLESRLAQSPYLGGNDYSIADIATYTWARYHDTHHIDLADYPAVEKWLNTISQRPAAKKLFG
>NZ_CP045257.1|WP_017627983.1|2537479_2538385_+|TIGR01777-family-protein
MNILITGGTGLIGRALICQLALDKHNITVLSRSPQKVYSHFCNEMACWTHLDDKENLNQFDAVINLAGEPIADKRWTPEQKQTLVNSRCKLTQKLVDLIKASDSPPSVLISGSAVGFYGDQGENNVTEETPPKDEFTHQLCAKWENIALDAQTPLTRVCLLRTGIVLSTKGGALPKMSPPFKLGLGGKLGNGKQYMPWIHIDDMVNAIVFLLNNNNTQGAFNLTAPHPVQNKAFTTTLAHVLKRPAFMTIPATILKLMMGESATLVLGGQQAFPKKLLDAGFSFRYPQLEGALEDIIRHKK
>NZ_CP045257.1|WP_004243729.1|2538404_2538986_-|UbiX-family-flavin-prenyltransferase
MKKLIVGLTGASGAIYGIRLLEILKSVPTVETHLVISQAARRTISLETDYSLKDIHALADIIYDDRDIGATISSGSFRVNGMVILPCSIKSLSGIVHSYTDTLVTRAADVVLKEGRKLVLCVRETPLHLGHLRLMTQAAELGAIIMPPVPAFYFQPKTIDDIVNQTVNRVLDQFDIDLPDDLFQRWQGDKPAR
>NZ_CP045257.1|WP_004243730.1|2539107_2540625_-|amidophosphoribosyltransferase
MCGIVGIAGVNPVNQSIYDALTVLQHRGQDAAGIATIDENNGFRLRKANGLVKDVFETRHMLRLKGTIGIGHVRYPTAGSSSASEAQPFYVNSPFGITLAHNGNLTNAHLLRRQLFETARRHINTTSDSEILLNVLAYELDRFDHFPLEPDNIFTAVAAMHKKLRGAYACVALIIGHGLLAFRDPYGIRPLVLGKRTLEDGRSEYMVASESVALDTLGFEFLRDVAPGEAVYITEQGQLFTRQCAENPQLVPCLFEYVYFARPDSFIDKISVYNARLRMGQKLGAKIAKEWEDLQIDVVIPIPETSCDIALEIAHILNKPYRQGFVKNRYVGRTFIMPGQQERRKSVRRKLNANRAEFRDKNVLLIDDSIVRGTTSEQIVELAREAGAKKVYFASAAPEVRFPNVYGIDMPNANELIAHGREVDEIRKLIGADGLIFQDLSDLIAAVQEENPDINQFECSVFDGVYITKDIDQGYLDYLENLRRDDEHKIRDQHEAENLEIYNEG
>NZ_CP045257.1|WP_004243731.1|2540655_2541147_-|colicin-V-production-protein
MVWIDYAIIAIIGFSALVSLIRGFVREALSLITWGCGFFVASQFYPYLAVYFTRFEDELVRNGIAIVTLFIATLIVGAVINYVISSLVQRTGLSGTDRVLGICFGALRGVLIVSALLFVLGAFTPMADSADWQRSELIPQFNHIIRWFFDYLQNASSFVSEKM

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Crispr_ID: NZ_CP045257_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP045257_4

2776435-2776577

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP045257_4

>merge|NZ_CP045257|4|2776435-2776577|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP045257|4|4|2776435-2776577|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP045257.1\|WP_004248538.1\|2767990_2768725_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP045257.1\|WP_004244087.1\|2800333_2800948_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP045257.1\|WP_004250359.1\|2797756_2798860_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP045257.1\|WP_004244066.1\|2770559_2770931_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP045257.1\|WP_017627935.1\|2796460_2797003_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP045257.1\|WP_004248539.1\|2769607_2770468_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP045257.1\|WP_012368229.1\|2798856_2800056_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|182559
NZ_CP045257.1\|WP_017627938.1\|2767105_2767327_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_171950801.1\|2795363_2796149_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP045257.1\|WP_004244072.1\|2774519_2774723_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004244059.1\|2766003_2766903_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP045257.1\|WP_004248541.1\|2774372_2774519_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_004244080.1\|2792533_2795200_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP045257.1\|WP_004244061.1\|2767394_2767823_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP045257.1\|WP_017627936.1\|2790655_2792521_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP045257.1\|WP_004244089.1\|2800950_2801703_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389
NZ_CP045257.1\|WP_004244063.1\|2768815_2769439_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP045257.1\|WP_004244084.1\|2797213_2797657_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP045257.1\|WP_004244077.1\|2789026_2790454_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP045257.1\|WP_004244067.1\|2771101_2773699_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424

Protein	Function_ID	Function_description	E-value
NZ_CP045257.1\|WP_004248538.1\|2767990_2768725_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP045257.1\|WP_004244066.1\|2770559_2770931_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP045257.1\|WP_017627935.1\|2796460_2797003_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.2681e-131
NZ_CP045257.1\|WP_004248539.1\|2769607_2770468_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120
NZ_CP045257.1\|WP_004244087.1\|2800333_2800948_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP045257.1\|WP_004244089.1\|2800950_2801703_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	9.25043e-119
NZ_CP045257.1\|WP_171950801.1\|2795363_2796149_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	1.50334e-168
NZ_CP045257.1\|WP_012368229.1\|2798856_2800056_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	9.16478e-109
NZ_CP045257.1\|WP_004244059.1\|2766003_2766903_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP045257.1\|WP_004244080.1\|2792533_2795200_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP045257.1\|WP_004250359.1\|2797756_2798860_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	5.50551e-180
NZ_CP045257.1\|WP_017627936.1\|2790655_2792521_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP045257.1\|WP_004244063.1\|2768815_2769439_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.63858e-119
NZ_CP045257.1\|WP_004244084.1\|2797213_2797657_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	5.15077e-55
NZ_CP045257.1\|WP_004244077.1\|2789026_2790454_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP045257.1\|WP_004244067.1\|2771101_2773699_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0

>NZ_CP045257.1|WP_004244072.1|2774519_2774723_+|hypothetical-protein
MIHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNETNMTENFTALHLIKKTNNRRIIL
>NZ_CP045257.1|WP_004248541.1|2774372_2774519_+|hypothetical-protein
MAINEKFVQEISSINYNNSIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP045257.1|WP_004244067.1|2771101_2773699_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP045257.1|WP_004244066.1|2770559_2770931_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP045257.1|WP_004248539.1|2769607_2770468_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP045257.1|WP_004244063.1|2768815_2769439_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP045257.1|WP_004248538.1|2767990_2768725_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP045257.1|WP_004244061.1|2767394_2767823_+|hypothetical-protein
MADIATLIAKWRNGLEVEIYTENYEFRYGRIKSSRFNASGEESVYYATYFHTRAKPKDNDPFLIITFDPVVGQDDFMFIETIIDHRTYFGSPGAGKTKSHIERRSSDLKRRIENGKKISSEPSSSVQNVNKNNNDSPDQENK
>NZ_CP045257.1|WP_017627938.1|2767105_2767327_+|hypothetical-protein
MSTFIRRSRNVALAIDAGRKSGSANIEGNTPADIQASLLKSLGEFTASIPTTKQQPYVKGSHGANHKKNYFGR
>NZ_CP045257.1|WP_004244059.1|2766003_2766903_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP045257.1|WP_004244077.1|2789026_2790454_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP045257.1|WP_017627936.1|2790655_2792521_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPATSTSAAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP045257.1|WP_004244080.1|2792533_2795200_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP045257.1|WP_171950801.1|2795363_2796149_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MASSNMAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKASHARIIDAHDKGDIAAESDAVLQYLLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP045257.1|WP_017627935.1|2796460_2797003_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTPLQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP045257.1|WP_004244084.1|2797213_2797657_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPATNSKETLPHWQINCTSTNTALQTLCHKVFKSH
>NZ_CP045257.1|WP_004250359.1|2797756_2798860_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP045257.1|WP_012368229.1|2798856_2800056_+|type-II-secretion-system-F-family-protein
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPMLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGVLLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQLISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP045257.1|WP_004244087.1|2800333_2800948_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP045257.1|WP_004244089.1|2800950_2801703_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHNGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP045257_2	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	NZ_CP045257.1	1303736-1303767	0	1.0

1. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to position: 1303736-1303767, mismatch: 0, identity: 1.0

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaactgctaccggtgcgcgtctgcagtct	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP045257_2	2.3\|2522658\|32\|NZ_CP045257\|CRISPRCasFinder	2522658-2522689	32	MK047640	Phage NV18, complete genome	10207-10238	0	1.0
NZ_CP045257_2	2.5\|2522781\|32\|NZ_CP045257\|CRISPRCasFinder	2522781-2522812	32	MK047640	Phage NV18, complete genome	10207-10238	0	1.0
NZ_CP045257_3	3.4\|2532027\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532027-2532058	32	MK047640	Phage NV18, complete genome	3002-3033	0	1.0
NZ_CP045257_2	2.9\|2522659\|34\|NZ_CP045257\|PILER-CR	2522659-2522692	34	MK047640	Phage NV18, complete genome	10205-10238	1	0.971
NZ_CP045257_2	2.11\|2522782\|34\|NZ_CP045257\|PILER-CR	2522782-2522815	34	MK047640	Phage NV18, complete genome	10205-10238	1	0.971
NZ_CP045257_3	3.5\|2532088\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532088-2532119	32	MK047640	Phage NV18, complete genome	5814-5845	1	0.969
NZ_CP045257_3	3.6\|2532149\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532149-2532180	32	MK047640	Phage NV18, complete genome	5814-5845	1	0.969
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	MN840487	Proteus phage 2207-N35, complete genome	30688-30719	1	0.969
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	16342-16373	1	0.969
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	MK047640	Phage NV18, complete genome	38520-38551	1	0.969
NZ_CP045257_2	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38267-38298	2	0.938
NZ_CP045257_3	3.3\|2531966\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2531966-2531997	32	MW057862	Providencia phage PSTCR7lys, complete genome	14912-14943	2	0.938
NZ_CP045257_3	3.10\|2532393\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532393-2532424	32	MN840487	Proteus phage 2207-N35, complete genome	29623-29654	2	0.938
NZ_CP045257_3	3.10\|2532393\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532393-2532424	32	NC_041925	Proteus phage VB_PmiS-Isfahan, complete genome	17491-17522	2	0.938
NZ_CP045257_3	3.10\|2532393\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532393-2532424	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	16116-16147	2	0.938
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	MG575420	Proteus phage vB_PmiP_RS10pmA, complete genome	14969-15000	2	0.938
NZ_CP045257_2	2.7\|2522536\|34\|NZ_CP045257\|PILER-CR	2522536-2522569	34	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38265-38298	3	0.912
NZ_CP045257_2	2.6\|2522842\|31\|NZ_CP045257\|CRISPRCasFinder	2522842-2522872	31	NC_047890	Escherichia phage PGT2, complete genome	28402-28432	4	0.871
NZ_CP045257_2	2.15\|2522658\|41\|NZ_CP045257\|CRT	2522658-2522698	41	MK047640	Phage NV18, complete genome	10198-10238	4	0.902
NZ_CP045257_2	2.17\|2522781\|41\|NZ_CP045257\|CRT	2522781-2522821	41	MK047640	Phage NV18, complete genome	10198-10238	4	0.902
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	NZ_CP034684	Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence	63621-63652	5	0.844
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	NZ_CP038617	Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence	108841-108872	6	0.812
NZ_CP045257_3	3.3\|2531966\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2531966-2531997	32	MN018232	Synechococcus phage S-B43, complete genome	100212-100243	7	0.781
NZ_CP045257_3	3.3\|2531966\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2531966-2531997	32	MK016663	Synechococcus phage S-H68, complete genome	34447-34478	7	0.781
NZ_CP045257_2	2.13\|2522535\|41\|NZ_CP045257\|CRT	2522535-2522575	41	KY420199	Proteus phage vB_PvuS_Pm34, complete genome	38258-38298	8	0.805
NZ_CP045257_3	3.10\|2532393\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532393-2532424	32	MH616823	Phage sp. isolate ctbf364, complete genome	482-513	8	0.75
NZ_CP045257_2	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	NZ_CP007054	Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence	3726-3757	9	0.719
NZ_CP045257_2	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	5035602-5035633	9	0.719
NZ_CP045257_2	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	NZ_CP030074	Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence	655666-655697	9	0.719
NZ_CP045257_2	2.3\|2522658\|32\|NZ_CP045257\|CRISPRCasFinder	2522658-2522689	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7157	10	0.688
NZ_CP045257_2	2.5\|2522781\|32\|NZ_CP045257\|CRISPRCasFinder	2522781-2522812	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7157	10	0.688
NZ_CP045257_3	3.4\|2532027\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532027-2532058	32	AX059140	Sequence 1 from Patent WO0075335	67129-67160	10	0.688
NZ_CP045257_3	3.4\|2532027\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532027-2532058	32	NC_004735	Rhodothermus phage RM378, complete genome	67129-67160	10	0.688
NZ_CP045257_3	3.8\|2532271\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532271-2532302	32	LR721753	Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence	145987-146018	10	0.688
NZ_CP045257_3	3.11\|2532454\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532454-2532485	32	NC_009819	Streptococcus phage P9, complete genome	38290-38321	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_KY020154	Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence	140146-140177	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP016763	Citrobacter freundii strain B38 plasmid pOZ172, complete sequence	64514-64545	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP021328	Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence	226363-226394	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP025467	Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence	73407-73438	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NC_018107	Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence	300176-300207	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP022441	Klebsiella sp. LY plasmid unnamed3, complete sequence	100165-100196	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	KU318421	Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence	128822-128853	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NC_023911	Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence	76769-76800	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP025964	Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence	3356-3387	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP038277	Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence	74106-74137	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP046614	Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence	129348-129379	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP043515	Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence	100842-100873	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP026014	Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence	209150-209181	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	60850-60881	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_CP026019	Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence	118203-118234	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344561	Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence	129894-129925	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344566	Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence	126137-126168	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344565	Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence	87406-87437	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344562	Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence	134790-134821	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344563	Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence	128738-128769	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF344564	Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence	129893-129924	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF042354	Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence	114817-114848	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF042353	Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence	114278-114309	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF042351	Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence	112901-112932	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MF042352	Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence	112901-112932	10	0.688
NZ_CP045257_3	3.12\|2532515\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532515-2532546	32	NZ_MG736312	Klebsiella pneumoniae strain KP91 plasmid pKP91, complete sequence	23551-23582	10	0.688
NZ_CP045257_2	2.7\|2522536\|34\|NZ_CP045257\|PILER-CR	2522536-2522569	34	NZ_CP007054	Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence	3726-3759	11	0.676
NZ_CP045257_2	2.9\|2522659\|34\|NZ_CP045257\|PILER-CR	2522659-2522692	34	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7159	11	0.676
NZ_CP045257_2	2.11\|2522782\|34\|NZ_CP045257\|PILER-CR	2522782-2522815	34	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	7126-7159	11	0.676
NZ_CP045257_3	3.4\|2532027\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532027-2532058	32	MN657098	Psychrobacter sp. strain ANT_P42 plasmid pA42P5, complete sequence	7907-7938	11	0.656
NZ_CP045257_3	3.13\|2532576\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532576-2532607	32	MN694201	Marine virus AFVG_250M801, complete genome	7954-7985	11	0.656
NZ_CP045257_3	3.13\|2532576\|32\|NZ_CP045257\|PILER-CR,CRISPRCasFinder,CRT	2532576-2532607	32	MN694455	Marine virus AFVG_250M805, complete genome	8019-8050	11	0.656

1. spacer 2.3|2522658|32|NZ_CP045257|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaa	Protospacer
********************************

2. spacer 2.5|2522781|32|NZ_CP045257|CRISPRCasFinder matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaa	Protospacer
********************************

3. spacer 3.4|2532027|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 0, identity: 1.0

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
gcctcggatatcattgcgaacaatcatttcac	Protospacer
********************************

4. spacer 2.9|2522659|34|NZ_CP045257|PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.971

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaact	Protospacer
*********************************

5. spacer 2.11|2522782|34|NZ_CP045257|PILER-CR matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.971

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaact	Protospacer
*********************************

6. spacer 3.5|2532088|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

ctgcaatcaatgcaacctgtgaatattcgata	CRISPR spacer
ccgcaatcaatgcaacctgtgaatattcgata	Protospacer
*.******************************

7. spacer 3.6|2532149|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

ctgcaatcaatgcaacctgtgaatattcgata	CRISPR spacer
ccgcaatcaatgcaacctgtgaatattcgata	Protospacer
*.******************************

8. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 1, identity: 0.969

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taaacggttataaacatctaacgtcattaacg	Protospacer
********************* **********

9. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 1, identity: 0.969

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taaacggttataaacatctaacgtcattaacg	Protospacer
********************* **********

10. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 1, identity: 0.969

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
tttttctgttttactgagagaaacgtaatcaa	Protospacer
************.*******************

11. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 2, identity: 0.938

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtct	Protospacer
*******.**.*********************

12. spacer 3.3|2531966|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MW057862 (Providencia phage PSTCR7lys, complete genome) position: , mismatch: 2, identity: 0.938

tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
tcagccgtacagtcagaaagtatttgaagatg	Protospacer
******.************** **********

13. spacer 3.10|2532393|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN840487 (Proteus phage 2207-N35, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

14. spacer 3.10|2532393|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_041925 (Proteus phage VB_PmiS-Isfahan, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

15. spacer 3.10|2532393|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 2, identity: 0.938

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
agtcgaacaccgtttaatgaaacattgtaaaa	Protospacer
***********.******.*************

16. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MG575420 (Proteus phage vB_PmiP_RS10pmA, complete genome) position: , mismatch: 2, identity: 0.938

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
taagcggttataaacatctaacgtcattaacg	Protospacer
***.***************** **********

17. spacer 2.7|2522536|34|NZ_CP045257|PILER-CR matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 3, identity: 0.912

tagaaactgctaccggtgcgcgtctgcagtctcg	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtctct	Protospacer
*******.**.**********************

18. spacer 2.6|2522842|31|NZ_CP045257|CRISPRCasFinder matches to NC_047890 (Escherichia phage PGT2, complete genome) position: , mismatch: 4, identity: 0.871

gtggtccatggggcgctgcgataggtggcgg	CRISPR spacer
ggggtccgtggggcgctgcgattggtggcgc	Protospacer
* *****.************** *******

19. spacer 2.15|2522658|41|NZ_CP045257|CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 4, identity: 0.902

taagccagaatgacaaagtgaaagcgatacaacggttcatt	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaacttttaact	Protospacer
*********************************  ** *.*

20. spacer 2.17|2522781|41|NZ_CP045257|CRT matches to MK047640 (Phage NV18, complete genome) position: , mismatch: 4, identity: 0.902

taagccagaatgacaaagtgaaagcgatacaacggttcatt	CRISPR spacer
taagccagaatgacaaagtgaaagcgatacaacttttaact	Protospacer
*********************************  ** *.*

21. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034684 (Bacillus sp. BD59S plasmid pBTBD59S1, complete sequence) position: , mismatch: 5, identity: 0.844

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
tgaacggttataaatatttaaagtcattaggg	Protospacer
*.************.**.***********. *

22. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038617 (Arsenophonus nasoniae strain FIN plasmid pArsFIN5, complete sequence) position: , mismatch: 6, identity: 0.812

--taaacggttataaacatctaaagtcattaacg	CRISPR spacer
acaaaacag--ataaacatctaaagtcttgaacg	Protospacer
   ****.*  **************** * ****

23. spacer 3.3|2531966|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 7, identity: 0.781

-tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
atgcacca-gcagtcagtaagtttttgaagatg	Protospacer
 *  .*** .******* ****.**********

24. spacer 3.3|2531966|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MK016663 (Synechococcus phage S-H68, complete genome) position: , mismatch: 7, identity: 0.781

-tcagccatacagtcagaaagtctttgaagatg	CRISPR spacer
atgcacca-gcagtcagtaagtttttgaagatg	Protospacer
 *  .*** .******* ****.**********

25. spacer 2.13|2522535|41|NZ_CP045257|CRT matches to KY420199 (Proteus phage vB_PvuS_Pm34, complete genome) position: , mismatch: 8, identity: 0.805

tagaaactgctaccggtgcgcgtctgcagtctcggttcatc	CRISPR spacer
tagaaaccgccaccggtgcgcgtctgcagtctcttcttttt	Protospacer
*******.**.**********************  .*. *.

26. spacer 3.10|2532393|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MH616823 (Phage sp. isolate ctbf364, complete genome) position: , mismatch: 8, identity: 0.75

agtcgaacaccatttaataaaacattgtaaaa	CRISPR spacer
tacaaaacaacatttaataaaacattttaaat	Protospacer
 .. .**** **************** ****

27. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_CP007054 (Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tgtcaaatgctaccggtgcgtgtctgcaaagc	Protospacer
*.  ** *************.*******.  .

28. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
agcaacctgataccggtgcgcgtctgtgggtt	Protospacer
 . ** *** ****************..* .*

29. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
cggacgctgctaccggcgcgcgcctgcagagc	Protospacer
..** .**********.*****.******  .

30. spacer 2.3|2522658|32|NZ_CP045257|CRISPRCasFinder matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 10, identity: 0.688

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttc	Protospacer
. . ** **.****************** .

31. spacer 2.5|2522781|32|NZ_CP045257|CRISPRCasFinder matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 10, identity: 0.688

taagccagaatgacaaagtgaaagcgatacaa	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttc	Protospacer
. . ** **.****************** .

32. spacer 3.4|2532027|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to AX059140 (Sequence 1 from Patent WO0075335) position: , mismatch: 10, identity: 0.688

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
catatatatatcattgtgaacaatgatttctc	Protospacer
  . .. *********.******* ***** *

33. spacer 3.4|2532027|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_004735 (Rhodothermus phage RM378, complete genome) position: , mismatch: 10, identity: 0.688

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
catatatatatcattgtgaacaatgatttctc	Protospacer
  . .. *********.******* ***** *

34. spacer 3.8|2532271|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to LR721753 (Aliivibrio wodanis 06/09/160 plasmid 2 complete sequence) position: , mismatch: 10, identity: 0.688

ataaccaagccttaaaaggtcgtctgcgcatt	CRISPR spacer
ataaccaagtcttaaaaggtagttcagattta	Protospacer
*********.********** **... .. *

35. spacer 3.11|2532454|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_009819 (Streptococcus phage P9, complete genome) position: , mismatch: 10, identity: 0.688

taaacggttataaacatctaaagtcattaacg	CRISPR spacer
ataacgataataaacatctaaagtcgattttt	Protospacer
  ****.* ****************. *  .

36. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY020154 (Klebsiella pneumoniae strain Kpn-431cz plasmid pKpn-431cz, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

37. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016763 (Citrobacter freundii strain B38 plasmid pOZ172, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

38. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021328 (Raoultella ornithinolytica strain Ro24724 plasmid pRo24724, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

39. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025467 (Klebsiella pneumoniae strain JS187 plasmid p187-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

40. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_018107 (Klebsiella michiganensis E718 plasmid pKOX_R1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

41. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022441 (Klebsiella sp. LY plasmid unnamed3, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

42. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to KU318421 (Klebsiella pneumoniae strain KP04 plasmid pKP04VIM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

43. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NC_023911 (Raoultella planticola strain KpNDM1 plasmid pKpNDM1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

44. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025964 (Klebsiella pneumoniae strain WCHKP34 plasmid pIMP4_LL34, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

45. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP038277 (Raoultella ornithinolytica strain WLK218 plasmid pWLK-238550, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

46. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046614 (Klebsiella pneumoniae strain WCGKP294 plasmid pWCGKP294-2, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

47. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP043515 (Enterobacter kobei strain EB_P8_L5_01.19 plasmid unnamed4, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

48. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026014 (Klebsiella variicola strain 13450 plasmid p13450-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

49. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

50. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026019 (Klebsiella pneumoniae strain 13190 plasmid p13190-1, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

51. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344561 (Klebsiella pneumoniae strain 11219 plasmid p11219-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

52. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344566 (Klebsiella pneumoniae strain A324 plasmid pA324-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

53. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344565 (Klebsiella pneumoniae strain 19051 plasmid p19051-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

54. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344562 (Klebsiella pneumoniae strain 12208 plasmid p12208-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

55. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344563 (Klebsiella pneumoniae strain 13190 plasmid p13190-VIM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

56. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF344564 (Klebsiella pneumoniae strain 13450 plasmid p13450-IMP, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

57. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042354 (Klebsiella pneumoniae strain 6TM plasmid pNDM_6TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

58. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042353 (Klebsiella pneumoniae strain 1TM plasmid pNDM_1TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

59. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042351 (Serratia marcescens strain 12TM plasmid pNDM_12TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

60. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MF042352 (Serratia marcescens strain 4TM plasmid pNDM_4TM, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

61. spacer 3.12|2532515|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MG736312 (Klebsiella pneumoniae strain KP91 plasmid pKP91, complete sequence) position: , mismatch: 10, identity: 0.688

tttttctgttttgctgagagaaacgtaatcaa	CRISPR spacer
ggtcattgttttgctcagataaacgtaattct	Protospacer
  *. .********* *** *********.

62. spacer 2.7|2522536|34|NZ_CP045257|PILER-CR matches to NZ_CP007054 (Opitutaceae bacterium TAV5 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.676

tagaaactgctaccggtgcgcgtctgcagtctcg	CRISPR spacer
tgtcaaatgctaccggtgcgtgtctgcaaagcac	Protospacer
*.  ** *************.*******.  .

63. spacer 2.9|2522659|34|NZ_CP045257|PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 11, identity: 0.676

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttcag	Protospacer
. . ** **.****************** .   *

64. spacer 2.11|2522782|34|NZ_CP045257|PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 11, identity: 0.676

taagccagaatgacaaagtgaaagcgatacaacg	CRISPR spacer
ccgccctgagtgacaaagtgaaagcgatcttcag	Protospacer
. . ** **.****************** .   *

65. spacer 3.4|2532027|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN657098 (Psychrobacter sp. strain ANT_P42 plasmid pA42P5, complete sequence) position: , mismatch: 11, identity: 0.656

gcctcggatatcattgcgaacaatcatttcac	CRISPR spacer
aagatggataaaattgcgaacaatcattaatt	Protospacer
.   .*****  ****************   .

66. spacer 3.13|2532576|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN694201 (Marine virus AFVG_250M801, complete genome) position: , mismatch: 11, identity: 0.656

aacagaaataacagctgcgatacgttctattt	CRISPR spacer
gttctcgttaacagctgcgatatgttcaattg	Protospacer
. .   . **************.**** ***

67. spacer 3.13|2532576|32|NZ_CP045257|PILER-CR,CRISPRCasFinder,CRT matches to MN694455 (Marine virus AFVG_250M805, complete genome) position: , mismatch: 11, identity: 0.656

aacagaaataacagctgcgatacgttctattt	CRISPR spacer
gttctggttaacagctgcgatatgttcaattg	Protospacer
. .  .. **************.**** ***

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1048545 : 1060506

Mycobacterium_phage(25.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096043046.1\|1048545_1049745_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_012367584.1\|1050353_1051322_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	5.9e-133	71.0
WP_004252248.1\|1051347_1053474_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.5e-205	51.3
WP_004246072.1\|1053502_1053907_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|1053918_1054143_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246069.1\|1054424_1054898_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1055095_1055305_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_162492994.1\|1055489_1055630_-	hypothetical protein	NA	NA	NA	NA
WP_004246058.1\|1056373_1056748_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0
WP_004246057.1\|1056763_1057729_-	lipoyl synthase	NA	NA	NA	NA
WP_004246056.1\|1057830_1058475_-	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA
WP_026090527.1\|1058832_1059096_-	YbeD family protein	NA	NA	NA	NA
WP_004246054.1\|1059294_1060506_-	D-alanyl-D-alanine carboxypeptidase DacA	B6DZZ7	Stx2-converting_phage	8.6e-105	49.1

DBSCAN-SWA_2

1096417 : 1136387

Proteus_phage(19.51%)

tail,lysis,integrase

attL 1094058:1094073|attR 1104149:1104164

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1094058:1094073	attL	NA	NA	NA	NA
WP_049195171.1\|1096417_1097419_-\|integrase	tyrosine-type recombinase/integrase	Q9MCR4	Enterobacteria_phage	2.8e-69	44.0
WP_012367595.1\|1097375_1097621_-	excisionase	NA	NA	NA	NA
WP_004247455.1\|1097617_1097956_-	DUF2591 domain-containing protein	A0A1P8DTH6	Proteus_phage	5.6e-14	45.0
WP_012367596.1\|1097948_1098125_-	hypothetical protein	NA	NA	NA	NA
WP_017628830.1\|1098282_1098543_-	hypothetical protein	NA	NA	NA	NA
WP_017628829.1\|1098594_1099047_-	hypothetical protein	NA	NA	NA	NA
WP_046334496.1\|1099331_1099514_-	hypothetical protein	NA	NA	NA	NA
WP_153274246.1\|1099553_1099715_-	hypothetical protein	NA	NA	NA	NA
WP_036907946.1\|1100220_1101027_-	recombination protein RecT	A0A1P8DTF2	Proteus_phage	3.9e-138	94.3
WP_004246000.1\|1101019_1101838_-	PD-(D/E)XK nuclease-like domain-containing protein	A0A1P8DTH1	Proteus_phage	3.5e-158	97.1
WP_004245998.1\|1101834_1102089_-	hypothetical protein	A0A1P8DTG3	Proteus_phage	7.2e-38	95.2
WP_004245997.1\|1102216_1102399_-	host cell division inhibitory peptide Kil	A0A1P8DTH8	Proteus_phage	4.4e-21	85.0
WP_004245996.1\|1102742_1103024_+	hypothetical protein	NA	NA	NA	NA
WP_004245995.1\|1102995_1103232_-	hypothetical protein	NA	NA	NA	NA
WP_049195172.1\|1103246_1103564_-	hypothetical protein	A0A1W6JNZ0	Morganella_phage	2.1e-18	51.4
WP_004245992.1\|1104311_1104833_-	hypothetical protein	I6R9C4	Salmonella_phage	5.6e-61	78.5
1104149:1104164	attR	NA	NA	NA	NA
WP_004245991.1\|1105070_1105412_-	DUF3024 domain-containing protein	A0A1W6JP12	Morganella_phage	2.1e-37	62.8
WP_004245990.1\|1105420_1106104_-	LexA family transcriptional regulator	A0A1P8DTH0	Proteus_phage	1.5e-130	98.2
WP_004245989.1\|1106186_1106396_+	helix-turn-helix transcriptional regulator	A0A1P8DTF8	Proteus_phage	3.3e-33	98.6
WP_049195174.1\|1106541_1106889_+	hypothetical protein	A0A1W6JNY4	Morganella_phage	3.2e-36	72.0
WP_004251793.1\|1106984_1107158_+	hypothetical protein	NA	NA	NA	NA
WP_049195176.1\|1107154_1107922_+	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.0e-23	52.8
WP_046335275.1\|1107921_1109307_+	AAA family ATPase	Q716D2	Shigella_phage	1.0e-114	47.7
WP_049195179.1\|1109332_1109782_+	hypothetical protein	A0A2H4FNF5	Salmonella_phage	2.9e-13	32.2
WP_004245984.1\|1109860_1110151_+	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_004245983.1\|1110147_1110504_+	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	3.2e-44	71.6
WP_004245982.1\|1110503_1111136_+	antitermination protein	I6PDF8	Cronobacter_phage	3.3e-23	34.3
WP_004247148.1\|1111447_1111969_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004247488.1\|1112127_1112550_+	hypothetical protein	NA	NA	NA	NA
WP_026164644.1\|1112603_1112873_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.5e-19	53.5
WP_017827434.1\|1112872_1113343_+	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_004244729.1\|1113324_1113483_+	hypothetical protein	NA	NA	NA	NA
WP_049195183.1\|1113485_1113947_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.4e-25	48.3
WP_004247494.1\|1114294_1114879_+	Bro-N domain-containing protein	Q3LZN7	Bacteriophage	2.0e-22	48.2
WP_004245979.1\|1114875_1115082_+	hypothetical protein	NA	NA	NA	NA
WP_004245978.1\|1115078_1115237_+	hypothetical protein	NA	NA	NA	NA
WP_004247495.1\|1115270_1115873_+	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.3e-65	69.6
WP_049195184.1\|1115875_1117363_+	hypothetical protein	A0A1W6JNY3	Morganella_phage	1.0e-264	88.8
WP_012367628.1\|1117362_1118733_+	DUF4055 domain-containing protein	A0A1B0VMH0	Pseudomonas_phage	9.0e-119	48.8
WP_012367629.1\|1118729_1119851_+	hypothetical protein	I6PD76	Cronobacter_phage	6.7e-104	51.0
WP_036907977.1\|1119962_1120724_+	hypothetical protein	A0A1B0VMG1	Pseudomonas_phage	1.5e-67	59.3
WP_004245970.1\|1120737_1121691_+	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	1.4e-126	71.6
WP_107033975.1\|1121693_1121978_+	Ig-like domain-containing protein	NA	NA	NA	NA
WP_012367632.1\|1122017_1122497_+	hypothetical protein	G8C7P9	Escherichia_phage	3.8e-32	47.7
WP_004247502.1\|1122499_1122850_+	hypothetical protein	I6PD77	Cronobacter_phage	4.9e-21	45.1
WP_049195193.1\|1122851_1123433_+	hypothetical protein	G8C7Q1	Escherichia_phage	3.5e-48	52.1
WP_049195195.1\|1123429_1123831_+	DUF4128 domain-containing protein	NA	NA	NA	NA
WP_004247505.1\|1123876_1124533_+\|tail	phage tail protein	G8C7Q3	Escherichia_phage	8.6e-59	57.7
WP_049195198.1\|1124584_1124890_+	hypothetical protein	I6PDG2	Cronobacter_phage	8.7e-22	55.4
WP_049195199.1\|1124904_1125192_+	DUF1799 domain-containing protein	A0A2H4J4F7	uncultured_Caudovirales_phage	6.9e-13	49.3
WP_049195202.1\|1125748_1126237_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA
WP_049195354.1\|1126508_1127345_-	phage antirepressor N-terminal domain-containing protein	I6S627	Salmonella_phage	1.3e-72	59.6
WP_049195353.1\|1127509_1127899_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_049195351.1\|1128051_1128453_+	hypothetical protein	NA	NA	NA	NA
WP_064971710.1\|1128565_1128838_+	hypothetical protein	NA	NA	NA	NA
WP_049195350.1\|1128905_1129139_+	hypothetical protein	NA	NA	NA	NA
WP_053089294.1\|1129264_1130086_+	zinc ribbon domain-containing protein	I6PDJ9	Cronobacter_phage	2.3e-21	50.9
WP_049195348.1\|1130146_1133086_+\|tail	phage tail tape measure protein	A0A2P0WA05	Enterobacter_phage	1.3e-133	34.0
WP_004247512.1\|1133108_1133321_+	hypothetical protein	NA	NA	NA	NA
WP_049195346.1\|1133360_1133651_+	hypothetical protein	NA	NA	NA	NA
WP_004245944.1\|1133670_1133871_-	hypothetical protein	NA	NA	NA	NA
WP_049195345.1\|1134014_1134356_+\|tail	phage tail protein	I6PBN7	Cronobacter_phage	9.0e-28	50.0
WP_049195343.1\|1134352_1135096_+\|tail	phage minor tail protein L	K7PJS0	Enterobacterial_phage	2.6e-88	59.8
WP_049195341.1\|1135092_1135803_+	C40 family peptidase	F1C573	Cronobacter_phage	1.8e-86	66.4
WP_036976694.1\|1135799_1136387_+\|tail	tail assembly protein	F1C572	Cronobacter_phage	7.2e-57	58.9

DBSCAN-SWA_3

1269124 : 1361448

108

Morganella_phage(13.46%)

lysis,holin,tRNA,tail,integrase,head,terminase,portal,transposase,capsid,protease

attL 1284160:1284219|attR 1323396:1323459

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247587.1\|1269124_1269826_-\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_004247588.1\|1269819_1270287_-	CidA/LrgA family protein	NA	NA	NA	NA
WP_017628455.1\|1270422_1272450_-\|tRNA	methionine--tRNA ligase	A0A1V0S905	Catovirus	6.0e-26	24.0
WP_004247590.1\|1272654_1273767_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_004247591.1\|1273979_1274621_+	uridine kinase	A0A1V0SAA3	Catovirus	2.0e-36	38.7
WP_004244515.1\|1274697_1275279_+	dCTP deaminase	I4AZP2	Saccharomonospora_phage	1.5e-30	41.6
WP_017628453.1\|1275323_1277255_+	outer membrane assembly protein AsmA	NA	NA	NA	NA
WP_004247593.1\|1277683_1279045_+	anaerobic C4-dicarboxylate transporter DcuC	NA	NA	NA	NA
WP_004247594.1\|1279206_1280787_-	TerC family protein	A0A0R6PEZ3	Moraxella_phage	3.8e-36	46.3
WP_053828334.1\|1280958_1281375_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.6e-45	62.8
WP_053867585.1\|1281397_1282606_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	6.2e-188	80.8
WP_004247595.1\|1282779_1284186_+	NADP-dependent phosphogluconate dehydrogenase	A0A1D7RI04	Synechococcus_phage	8.6e-32	29.7
1284160:1284219	attL	NA	NA	NA	NA
WP_080047956.1\|1284254_1284506_-	pyocin activator PrtN family protein	A0A1W6JP35	Morganella_phage	1.6e-18	59.5
WP_156868406.1\|1284511_1284829_-	hypothetical protein	NA	NA	NA	NA
WP_156868405.1\|1284815_1285214_-	hypothetical protein	NA	NA	NA	NA
WP_156868404.1\|1285200_1285452_-	hypothetical protein	NA	NA	NA	NA
WP_124743716.1\|1285675_1286284_-	hypothetical protein	NA	NA	NA	NA
WP_156868403.1\|1286283_1286982_-	Rha family transcriptional regulator	A0A286S260	Klebsiella_phage	1.2e-63	57.4
WP_156868402.1\|1286993_1287470_-	hypothetical protein	NA	NA	NA	NA
WP_156868401.1\|1287466_1287673_-	hypothetical protein	NA	NA	NA	NA
WP_156868400.1\|1287659_1288013_-	hypothetical protein	NA	NA	NA	NA
WP_156868399.1\|1288086_1288509_-	hypothetical protein	NA	NA	NA	NA
WP_156868398.1\|1288755_1289040_-	hypothetical protein	NA	NA	NA	NA
WP_156868397.1\|1289032_1289230_-	hypothetical protein	NA	NA	NA	NA
WP_104836582.1\|1289216_1289414_-	hypothetical protein	NA	NA	NA	NA
WP_104836581.1\|1289416_1289623_-	hypothetical protein	NA	NA	NA	NA
WP_104836580.1\|1289624_1290089_-	helix-turn-helix transcriptional regulator	A0A059VK24	Pseudomonas_phage	2.3e-05	35.0
WP_080047921.1\|1290266_1290677_-	hypothetical protein	B9UDL3	Salmonella_phage	5.5e-48	70.4
WP_104836579.1\|1290833_1291250_-	hypothetical protein	NA	NA	NA	NA
WP_104836578.1\|1291239_1291491_-	hypothetical protein	NA	NA	NA	NA
WP_156868396.1\|1291513_1292383_-	hypothetical protein	NA	NA	NA	NA
WP_014656506.1\|1292681_1293380_-	helix-turn-helix transcriptional regulator	E7C9R0	Salmonella_phage	5.0e-49	44.6
WP_135024408.1\|1293505_1293763_+	helix-turn-helix domain-containing protein	G8C7U2	Escherichia_phage	1.6e-16	62.2
WP_083629123.1\|1293755_1294004_+	hypothetical protein	A0A286S2B5	Klebsiella_phage	4.0e-17	56.0
WP_156868395.1\|1294264_1295830_+	DEAD/DEAH box helicase family protein	A0A286N2P9	Klebsiella_phage	4.4e-218	68.7
WP_174694358.1\|1295826_1296801_+	toprim domain-containing protein	A0A286N2Q0	Klebsiella_phage	4.5e-104	54.6
WP_017827437.1\|1296800_1297184_+	antitermination protein Q	A0A088CD47	Shigella_phage	5.5e-50	72.2
WP_156868394.1\|1297556_1298180_+	hypothetical protein	NA	NA	NA	NA
WP_156868393.1\|1298199_1298616_+	hypothetical protein	NA	NA	NA	NA
WP_049219097.1\|1298904_1299084_+	hypothetical protein	NA	NA	NA	NA
WP_049219095.1\|1299063_1299327_-	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_036906009.1\|1299696_1299993_+\|holin	phage holin family protein	E7C9S8	Salmonella_phage	1.0e-19	45.4
WP_049219093.1\|1299989_1300394_+	structural protein	A0A2I7RXE2	Vibrio_phage	2.6e-26	51.3
WP_049219091.1\|1300390_1300843_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.0e-31	56.5
WP_167767287.1\|1300842_1300983_+	hypothetical protein	NA	NA	NA	NA
WP_049219090.1\|1301106_1301298_+	hypothetical protein	NA	NA	NA	NA
WP_049219089.1\|1301399_1301807_+	hypothetical protein	A0A1P8DTD7	Proteus_phage	1.7e-57	85.9
WP_049219087.1\|1301872_1302223_+	HNH endonuclease	A0A1P8DTD1	Proteus_phage	2.4e-60	93.9
WP_049218006.1\|1302219_1302417_+	hypothetical protein	A0A1P8DTB8	Proteus_phage	6.4e-26	87.7
WP_049218005.1\|1302564_1303035_+\|terminase	phage terminase small subunit P27 family	A0A1W6JP17	Morganella_phage	7.7e-70	81.4
WP_071425264.1\|1303038_1304772_+\|terminase	terminase large subunit	A0A1P8DTK0	Proteus_phage	0.0e+00	98.2
WP_174694359.1\|1304768_1304930_+	hypothetical protein	A0A1W6JP78	Morganella_phage	2.5e-12	66.0
WP_174694360.1\|1304919_1306149_+\|portal	phage portal protein	A0A1W6JP33	Morganella_phage	4.1e-211	87.3
WP_017827274.1\|1306138_1306744_+\|head,protease	HK97 family phage prohead protease	Q8SBH9	Shigella_phage	9.0e-87	80.5
WP_156868408.1\|1306759_1307989_+\|capsid	phage major capsid protein	A0A1W6JP20	Morganella_phage	3.8e-185	82.0
WP_026164628.1\|1308074_1308377_+\|head,tail	phage gp6-like head-tail connector protein	A0A1W6JNZ5	Morganella_phage	6.8e-35	70.0
WP_080749322.1\|1308383_1308710_+\|head	phage head closure protein	Q7Y406	Yersinia_phage	2.6e-16	44.5
WP_156868392.1\|1308696_1309086_+	hypothetical protein	Q7Y405	Yersinia_phage	1.7e-30	50.0
WP_026164627.1\|1309094_1309487_+	HK97 gp10 family phage protein	Q7Y404	Yersinia_phage	1.2e-31	57.9
WP_017827268.1\|1309509_1309986_+\|tail	major tail shaft subunit	Q7Y403	Yersinia_phage	6.9e-58	75.5
WP_017827267.1\|1309985_1310336_+\|tail	phage tail protein	Q6UAW8	Klebsiella_phage	6.2e-16	40.5
WP_156868391.1\|1310592_1313898_+\|tail	phage tail tape measure protein	Q6UAW7	Klebsiella_phage	1.0e-176	41.4
WP_036901058.1\|1313898_1314498_+	hypothetical protein	S4TSP7	Salmonella_phage	4.0e-55	55.4
WP_156868390.1\|1314494_1315076_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	1.1e-49	50.0
WP_156868389.1\|1315117_1315762_+	hypothetical protein	NA	NA	NA	NA
WP_049210594.1\|1315827_1316226_+	hypothetical protein	A0A2H4IYI8	uncultured_Caudovirales_phage	4.1e-32	47.7
WP_156868388.1\|1316226_1319475_+	DUF1983 domain-containing protein	A0A1W6JS43	Salmonella_phage	8.8e-189	40.2
WP_156868387.1\|1319491_1320832_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	2.3e-114	55.1
WP_174694357.1\|1320828_1320987_+	hypothetical protein	NA	NA	NA	NA
WP_049211399.1\|1321009_1321315_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_156868386.1\|1321705_1322080_-	hypothetical protein	NA	NA	NA	NA
WP_080047906.1\|1322157_1323240_-\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	4.8e-131	62.5
WP_004244520.1\|1323541_1324039_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA
1323396:1323459	attR	NA	NA	NA	NA
WP_017628450.1\|1324352_1325504_+	L-threonine dehydrogenase	NA	NA	NA	NA
WP_012367689.1\|1325646_1326264_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	A0A2H4UVM0	Bodo_saltans_virus	1.6e-14	30.1
WP_004244523.1\|1326263_1327037_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA
WP_004244524.1\|1327018_1327756_-	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	NA	NA	NA
WP_004244525.1\|1327762_1328353_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA
WP_004244526.1\|1328352_1329420_-	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA
WP_004252070.1\|1329468_1330551_-	histidinol-phosphate transaminase	NA	NA	NA	NA
WP_017628449.1\|1330553_1331870_-	histidinol dehydrogenase	NA	NA	NA	NA
WP_004244529.1\|1331876_1332776_-	ATP phosphoribosyltransferase	A0A0F7Q4B0	Cellulophaga_phage	2.5e-08	84.2
WP_017628448.1\|1333281_1334103_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004244532.1\|1334099_1334720_-	glutathione S-transferase	NA	NA	NA	NA
WP_004247605.1\|1334877_1336080_+	serine hydrolase	B6DZZ7	Stx2-converting_phage	4.0e-102	50.1
WP_017628447.1\|1336169_1337840_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_004244536.1\|1338187_1339552_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_017628446.1\|1339666_1340995_-	HAAAP family serine/threonine permease	NA	NA	NA	NA
WP_004247606.1\|1341923_1342535_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA
WP_004252055.1\|1342772_1343198_+	YjbQ family protein	NA	NA	NA	NA
WP_004244541.1\|1343464_1343728_-	GrxA family glutaredoxin	A0A2I7SAE2	Vibrio_phage	6.5e-26	70.5
WP_004247610.1\|1343898_1344201_+	YbjC family protein	NA	NA	NA	NA
WP_012367695.1\|1344371_1344875_+	YbjN domain-containing protein	NA	NA	NA	NA
WP_012367696.1\|1344903_1346037_+	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	A0A1X9I6F4	Streptococcus_phage	3.5e-23	25.5
WP_004244548.1\|1346179_1346848_-	arginine ABC transporter permease ArtM	NA	NA	NA	NA
WP_004244549.1\|1346847_1347552_-	arginine ABC transporter permease ArtQ	NA	NA	NA	NA
WP_004244550.1\|1347582_1348317_-	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_012367698.1\|1348331_1349060_-	arginine ABC transporter ATP-binding protein ArtP	G9BWD6	Planktothrix_phage	8.4e-31	36.7
WP_026090488.1\|1349175_1350630_-	DUF2867 domain-containing protein	NA	NA	NA	NA
WP_004244553.1\|1350681_1351584_-	lysine exporter LysO family protein	NA	NA	NA	NA
WP_004244554.1\|1351929_1353603_+	DUF2813 domain-containing protein	NA	NA	NA	NA
WP_004244555.1\|1353744_1354854_+	macrolide transporter subunit MacA	NA	NA	NA	NA
WP_017628445.1\|1354853_1356797_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	6.5e-38	41.3
WP_004244557.1\|1356959_1357169_-	cold shock domain-containing protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.4e-15	58.2
WP_004244558.1\|1357458_1357773_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_004244559.1\|1357803_1360098_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1360217_1360436_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_012367702.1\|1360755_1361448_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA

DBSCAN-SWA_4

1403452 : 1456597

uncultured_Caudovirales_phage(50.0%)

tRNA,integrase,plate,transposase

attL 1438747:1438763|attR 1464329:1464345

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244596.1\|1403452_1404226_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1404235_1405558_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1405538_1406270_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_012367715.1\|1406266_1410724_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004247636.1\|1411006_1411660_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.2e-102	80.4
WP_004247637.1\|1412065_1412779_+	acid phosphatase AphA	NA	NA	NA	NA
WP_049194798.1\|1413128_1414844_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1415175_1415724_+	YcbK family protein	NA	NA	NA	NA
WP_004247640.1\|1415773_1416424_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1416516_1416990_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004244608.1\|1417080_1418817_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_017628437.1\|1418809_1420165_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_017628436.1\|1420202_1423751_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_012367720.1\|1423753_1425217_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1425222_1425873_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1425874_1426663_-	hypothetical protein	NA	NA	NA	NA
WP_049194443.1\|1426666_1429378_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1429386_1430142_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_026164596.1\|1430134_1431493_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_063073901.1\|1431494_1432046_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1432047_1433316_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_049194444.1\|1433320_1434358_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_049194445.1\|1434321_1436097_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244624.1\|1436104_1436536_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_063073902.1\|1436541_1438020_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004247653.1\|1438040_1438541_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
1438747:1438763	attL	NA	NA	NA	NA
WP_004246976.1\|1440438_1440957_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_053828341.1\|1441040_1443233_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004251951.1\|1443244_1443664_+	DcrB-related protein	NA	NA	NA	NA
WP_063693455.1\|1443728_1448429_+	AHH domain-containing protein	A0A2H4JFP5	uncultured_Caudovirales_phage	3.0e-28	42.9
WP_049195080.1\|1448456_1449068_+	hypothetical protein	NA	NA	NA	NA
WP_036894566.1\|1449294_1449762_+	hypothetical protein	NA	NA	NA	NA
WP_049194460.1\|1450567_1451023_+	hypothetical protein	NA	NA	NA	NA
WP_046335381.1\|1451829_1452093_+	hypothetical protein	NA	NA	NA	NA
WP_049195253.1\|1452092_1452560_+	hypothetical protein	NA	NA	NA	NA
WP_152964539.1\|1452721_1452862_+	hypothetical protein	NA	NA	NA	NA
WP_049195076.1\|1453821_1454232_+	hypothetical protein	NA	NA	NA	NA
WP_081000326.1\|1455102_1455612_+	RHS repeat-associated core domain-containing protein	A0A2H4JHK7	uncultured_Caudovirales_phage	1.7e-14	55.0
WP_046335376.1\|1455608_1456013_+	hypothetical protein	NA	NA	NA	NA
WP_155722981.1\|1456078_1456597_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1464329:1464345	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1596611 : 1631099

Morganella_phage(20.0%)

lysis,tRNA,tail,integrase,head,terminase,portal,capsid,protease

attL 1590719:1590735|attR 1637652:1637668

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1590719:1590735	attL	NA	NA	NA	NA
WP_004247117.1\|1596611_1597715_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|1597820_1598273_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247119.1\|1598265_1598895_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1599033_1600287_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_004251675.1\|1600407_1601535_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	3.7e-126	60.6
WP_004251672.1\|1601515_1601758_-	excisionase	NA	NA	NA	NA
WP_004247124.1\|1601819_1602350_-	hypothetical protein	A0A1W6JP41	Morganella_phage	5.7e-53	58.6
WP_004247125.1\|1602406_1603234_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	5.5e-79	56.6
WP_004247126.1\|1603299_1603674_-	hypothetical protein	Q8HAA1	Salmonella_phage	3.2e-42	71.4
WP_004247128.1\|1604322_1604805_-	hypothetical protein	A0A2D1GNH0	Pseudomonas_phage	3.7e-11	51.4
WP_004247129.1\|1604908_1605148_+	helix-turn-helix domain-containing protein	D0UIL8	Aggregatibacter_phage	3.0e-14	54.8
WP_004247130.1\|1605232_1605691_+	hypothetical protein	K7PJS5	Enterobacterial_phage	3.9e-26	50.8
WP_096058090.1\|1605780_1605990_+	hypothetical protein	NA	NA	NA	NA
WP_063108983.1\|1605979_1606159_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	6.8e-11	53.4
WP_004247133.1\|1606171_1607263_+	hypothetical protein	H2DE83	Erwinia_phage	8.2e-30	55.3
WP_004247134.1\|1607434_1608142_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	5.6e-56	51.7
WP_004247135.1\|1608141_1609167_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	2.8e-88	47.6
WP_004247136.1\|1609194_1609593_+	antitermination protein	Q8W638	Enterobacteria_phage	1.0e-30	55.0
WP_004247137.1\|1609935_1610148_+	cold-shock protein	A0A1W6JNX5	Morganella_phage	7.6e-25	75.7
WP_004247148.1\|1610549_1611071_+	DUF1440 domain-containing protein	NA	NA	NA	NA
WP_004251632.1\|1611394_1611730_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017827436.1\|1611833_1612760_+	cupin domain-containing protein	NA	NA	NA	NA
WP_036905792.1\|1613176_1613605_+	hypothetical protein	NA	NA	NA	NA
WP_036894738.1\|1613757_1614009_+	hypothetical protein	NA	NA	NA	NA
WP_036905789.1\|1614452_1614722_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	4.6e-19	53.5
WP_036900946.1\|1614721_1615192_+	lysozyme	A0A1W6JNW4	Morganella_phage	5.8e-49	60.5
WP_162837602.1\|1615173_1615332_+	hypothetical protein	NA	NA	NA	NA
WP_036905787.1\|1615334_1615796_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	3.7e-24	47.6
WP_001967215.1\|1616692_1617031_+	HNH endonuclease	F1C587	Cronobacter_phage	1.6e-40	67.9
WP_036905782.1\|1617033_1617246_+	hypothetical protein	A0A1W6JP16	Morganella_phage	1.1e-07	44.8
WP_036905779.1\|1617369_1617837_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	5.5e-44	59.7
WP_036969710.1\|1617790_1619524_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	6.9e-148	46.5
WP_012367784.1\|1619523_1620792_+\|portal	phage portal protein	Q77W97	Enterobacteria_phage	5.1e-201	80.2
WP_004251596.1\|1620809_1621478_+\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	1.1e-82	65.3
WP_004251594.1\|1621481_1622648_+\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	5.6e-170	79.8
WP_004251590.1\|1622686_1622986_+\|head,tail	phage head-tail connector protein	K7PKV5	Enterobacterial_phage	2.8e-33	64.3
WP_004251588.1\|1622985_1623315_+\|head	phage head closure protein	NA	NA	NA	NA
WP_004251585.1\|1623304_1623778_+	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	1.9e-12	31.5
WP_004251583.1\|1623783_1624125_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_004251580.1\|1624134_1624800_+	hypothetical protein	NA	NA	NA	NA
WP_004251577.1\|1624864_1625281_+	hypothetical protein	NA	NA	NA	NA
WP_036894769.1\|1625277_1625556_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_004242485.1\|1625580_1625772_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_036905771.1\|1625898_1629174_+\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	6.4e-54	45.6
WP_004251569.1\|1629174_1629771_+	hypothetical protein	S4TSP7	Salmonella_phage	4.6e-51	52.8
WP_004251564.1\|1629770_1630352_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	2.4e-52	50.0
WP_004251562.1\|1630363_1630669_+	hypothetical protein	NA	NA	NA	NA
WP_004251558.1\|1630700_1631099_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
1637652:1637668	attR	NA	NA	NA	NA

DBSCAN-SWA_6

2220724 : 2264613

Salmonella_phage(22.22%)

tail,integrase,terminase,holin

attL 2243981:2243995|attR 2264833:2264847

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243319.1\|2220724_2221777_-	nucleotidyltransferase domain-containing protein	A0A067XQU1	Caulobacter_phage	1.6e-06	23.1
WP_017628042.1\|2221760_2222540_-	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.4e-31	39.3
WP_115370907.1\|2222917_2223412_-	hypothetical protein	NA	NA	NA	NA
WP_115370906.1\|2223411_2223756_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	7.0e-44	85.3
WP_004243326.1\|2223758_2224031_-\|holin	phage holin family protein	T1SA10	Salmonella_phage	1.9e-12	38.9
WP_115370905.1\|2224027_2224399_-	hypothetical protein	G9L6E6	Escherichia_phage	2.5e-15	38.2
WP_156868326.1\|2224473_2226720_-	hypothetical protein	G9L6E4	Escherichia_phage	1.5e-62	54.7
WP_109023870.1\|2226893_2227145_+	hypothetical protein	NA	NA	NA	NA
WP_135024034.1\|2227340_2227481_+	ash family protein	NA	NA	NA	NA
WP_156868325.1\|2227503_2228226_+	ORF6N domain-containing protein	A0A0P0ZC44	Stx2-converting_phage	3.1e-33	54.0
WP_020945799.1\|2228256_2228796_-	hypothetical protein	NA	NA	NA	NA
WP_051175910.1\|2228797_2229085_-	hypothetical protein	A0A2R9YJP3	Escherichia_phage	6.7e-08	36.2
WP_156868324.1\|2229081_2232459_-	hypothetical protein	A0A2I7RY58	Vibrio_phage	6.2e-185	35.9
WP_156868323.1\|2232458_2235542_-	hypothetical protein	T1SBJ1	Salmonella_phage	2.3e-162	50.6
WP_004243338.1\|2235544_2236093_-	hypothetical protein	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	3.4e-45	60.2
WP_115370899.1\|2236092_2236581_-	hypothetical protein	A0A0F6R7N6	Escherichia_coli_O157_typing_phage	7.1e-50	60.5
WP_156868322.1\|2236564_2239027_-	hypothetical protein	A0A0F6TJD3	Escherichia_coli_O157_typing_phage	0.0e+00	70.0
WP_156868321.1\|2239026_2239632_-	hypothetical protein	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	1.0e-66	61.2
WP_020945806.1\|2239631_2239943_-	hypothetical protein	Q858G5	Salmonella_phage	8.8e-14	38.5
WP_156868320.1\|2240006_2240348_-	hypothetical protein	NA	NA	NA	NA
WP_060555916.1\|2240356_2240788_-	hypothetical protein	A0A193GYT9	Enterobacter_phage	1.4e-30	54.8
WP_004243350.1\|2240846_2241827_-	hypothetical protein	G9L6C5	Escherichia_phage	6.5e-111	59.4
WP_046334336.1\|2241842_2242520_-	peptidase	T1SAP9	Salmonella_phage	4.0e-43	64.3
WP_156868319.1\|2242549_2242864_-	hypothetical protein	Q2A090	Sodalis_phage	2.0e-13	45.5
WP_156868318.1\|2242860_2244525_-\|tail	phage tail protein	A0A193GYI4	Enterobacter_phage	6.3e-199	65.9
2243981:2243995	attL	NA	NA	NA	NA
WP_004243356.1\|2244534_2244747_-	hypothetical protein	NA	NA	NA	NA
WP_116672587.1\|2244954_2245290_+	hypothetical protein	NA	NA	NA	NA
WP_046334334.1\|2245332_2246817_-	hypothetical protein	G9L6B8	Escherichia_phage	9.5e-231	77.8
WP_080047821.1\|2246816_2247380_-\|terminase	terminase small subunit	G9L6B7	Escherichia_phage	2.5e-43	50.3
WP_156868317.1\|2247429_2248092_-	hypothetical protein	NA	NA	NA	NA
WP_156868316.1\|2248117_2248459_-	hypothetical protein	H9C172	Pectobacterium_phage	1.2e-35	65.1
WP_156868315.1\|2248518_2248869_-	DUF2591 family protein	NA	NA	NA	NA
WP_156868314.1\|2248865_2249072_-	DUF551 domain-containing protein	NA	NA	NA	NA
WP_156868313.1\|2249058_2249280_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_166465207.1\|2249290_2249464_-	hypothetical protein	NA	NA	NA	NA
WP_060555927.1\|2249590_2249986_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	5.2e-35	60.9
WP_046334325.1\|2249982_2250396_-	hypothetical protein	NA	NA	NA	NA
WP_004243368.1\|2250642_2251368_-	ATP-binding protein	A0A1W6JP39	Morganella_phage	6.7e-105	78.8
WP_156868312.1\|2251367_2252210_-	hypothetical protein	A0A0D4DBT2	Acinetobacter_phage	5.0e-51	59.7
WP_004243371.1\|2252220_2252406_-	hypothetical protein	A0A0F6TJB7	Escherichia_coli_O157_typing_phage	6.0e-10	50.8
WP_072064163.1\|2252545_2252824_-	hypothetical protein	NA	NA	NA	NA
WP_004243373.1\|2252901_2253510_+	hypothetical protein	A0A0F6R8L7	Escherichia_coli_O157_typing_phage	1.5e-28	35.4
WP_004243375.1\|2253758_2253920_+	hypothetical protein	NA	NA	NA	NA
WP_156868311.1\|2253906_2255628_+	PD-(D/E)XK nuclease-like domain-containing protein	H6WRX1	Salmonella_phage	5.3e-108	50.0
WP_156868310.1\|2255673_2256714_+	recombinase RecT	H6WRX0	Salmonella_phage	2.5e-100	50.7
WP_156868309.1\|2256757_2257015_+	AlpA family phage regulatory protein	NA	NA	NA	NA
WP_087802219.1\|2257076_2257259_+	hypothetical protein	NA	NA	NA	NA
WP_087802218.1\|2257297_2257831_+	hypothetical protein	J9Q748	Salmonella_phage	2.8e-39	46.9
WP_087802217.1\|2257830_2258085_+	hypothetical protein	NA	NA	NA	NA
WP_087802216.1\|2258077_2258578_+	hypothetical protein	NA	NA	NA	NA
WP_087802215.1\|2258561_2259035_+	class I SAM-dependent methyltransferase	A0A1W6JP48	Morganella_phage	2.0e-70	78.7
WP_087802214.1\|2259031_2259673_+	DNA methyltransferase	G8C7S6	Escherichia_phage	6.6e-72	61.1
WP_036936127.1\|2259675_2259873_+	hypothetical protein	A0A1P8DTH3	Proteus_phage	7.5e-19	65.1
WP_156868308.1\|2259872_2260061_+	hypothetical protein	NA	NA	NA	NA
WP_087726475.1\|2260068_2261265_-\|integrase	tyrosine-type recombinase/integrase	T1S9J3	Salmonella_phage	1.6e-140	61.9
WP_004250844.1\|2261484_2263062_-	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA
WP_004243391.1\|2263146_2264613_-	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	4.7e-89	38.7
2264833:2264847	attR	NA	NA	NA	NA

DBSCAN-SWA_7

2439104 : 2457907

Escherichia_phage(21.43%)

lysis,plate,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368081.1\|2439104_2441543_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.0e-261	54.5
WP_004243609.1\|2441554_2442172_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_004243611.1\|2442175_2442952_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|2443067_2443610_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|2444178_2444358_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_017628011.1\|2445672_2446329_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	6.6e-35	39.4
WP_017628010.1\|2446325_2447513_-\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|2447505_2447850_-	hypothetical protein	NA	NA	NA	NA
WP_004243621.1\|2447846_2448539_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	35.7
WP_004243622.1\|2448541_2449354_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2449322_2449643_-	hypothetical protein	NA	NA	NA	NA
WP_004250719.1\|2449655_2450144_-	hypothetical protein	NA	NA	NA	NA
WP_017628009.1\|2450146_2452450_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.6e-14	23.1
WP_004243627.1\|2452532_2452991_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_012368088.1\|2453050_2453503_-	hypothetical protein	NA	NA	NA	NA
WP_017628008.1\|2453513_2455001_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.7
WP_004248364.1\|2455009_2455522_-	hypothetical protein	NA	NA	NA	NA
WP_017628007.1\|2455558_2456008_-\|lysis	lysis protein	NA	NA	NA	NA
WP_017628006.1\|2456004_2456409_-	hypothetical protein	A0A0E3JJ20	Enterobacteria_phage	1.0e-25	46.6
WP_004248367.1\|2456411_2456711_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_004243640.1\|2457091_2457907_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.4

DBSCAN-SWA_8

2934465 : 3002031

Salmonella_phage(17.65%)

lysis,holin,integrase,terminase,capsid

attL 2950280:2950326|attR 3000890:3000936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_052715531.1\|2934465_2937696_-	hypothetical protein	A0A1W6JNU2	Morganella_phage	1.8e-101	42.0
WP_036918873.1\|2937712_2938054_-	hypothetical protein	NA	NA	NA	NA
WP_072271821.1\|2938053_2938227_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA
WP_036918875.1\|2938398_2938911_-	hypothetical protein	NA	NA	NA	NA
WP_096043103.1\|2939895_2942616_-	DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	0.0e+00	66.1
WP_046334700.1\|2942612_2942957_-	hypothetical protein	A0A1W6JPD8	Morganella_phage	1.4e-44	71.1
WP_052715532.1\|2942971_2943568_-	hypothetical protein	A0A286S1S7	Klebsiella_phage	6.4e-29	38.2
WP_036900272.1\|2943567_2943762_-	hypothetical protein	NA	NA	NA	NA
WP_165469419.1\|2943761_2943935_-	hypothetical protein	NA	NA	NA	NA
WP_046334701.1\|2943931_2944543_-	ORF6N domain-containing protein	A0A1B5FPC0	Escherichia_phage	3.3e-20	46.3
WP_036907509.1\|2944539_2944749_-	hypothetical protein	A0A1W6JPF1	Morganella_phage	4.7e-11	52.2
WP_036918882.1\|2944745_2944925_-	hypothetical protein	NA	NA	NA	NA
WP_046334702.1\|2944921_2945179_-	hypothetical protein	NA	NA	NA	NA
WP_072052191.1\|2945181_2945355_-	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_080942627.1\|2945347_2946289_-	ash family protein	A0A1W6JPK3	Morganella_phage	3.3e-64	50.0
WP_046334703.1\|2946285_2947119_-	antA/AntB antirepressor family protein	A0A088CBR4	Shigella_phage	1.4e-21	46.1
WP_036918890.1\|2947131_2947527_-	hypothetical protein	A0A1W6JPH9	Morganella_phage	2.1e-28	56.9
WP_036918892.1\|2947526_2947724_-	AlpA family transcriptional regulator	A0A2H4J8C8	uncultured_Caudovirales_phage	2.3e-07	46.3
WP_046334704.1\|2948904_2950116_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.8e-129	55.7
2950280:2950326	attL	NA	NA	NA	NA
WP_124724720.1\|2950500_2950731_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	4.8e-33	96.1
WP_156868294.1\|2950752_2951703_-	acyltransferase family protein	NA	NA	NA	NA
WP_174694361.1\|2951711_2953610_-	hypothetical protein	F1C5A8	Cronobacter_phage	2.3e-48	69.3
WP_156868293.1\|2953668_2956137_-	MoaD/ThiS family protein	F1C5A7	Cronobacter_phage	5.6e-252	51.8
WP_156868292.1\|2956123_2956516_-	C40 family peptidase	F1C5F2	Cronobacter_phage	2.7e-44	59.5
WP_004247776.1\|2956512_2956983_-	DUF1833 family protein	F1C5F1	Cronobacter_phage	2.6e-41	51.3
WP_156868291.1\|2956982_2957459_-	hypothetical protein	F1C5F0	Cronobacter_phage	4.3e-60	71.6
WP_156868290.1\|2957462_2960804_-	tape measure protein	A0A1W6JNU2	Morganella_phage	3.6e-193	45.6
WP_124743686.1\|2960868_2961177_-	hypothetical protein	NA	NA	NA	NA
WP_124743685.1\|2961240_2961510_-	hypothetical protein	NA	NA	NA	NA
WP_121909508.1\|2961548_2962241_-	hypothetical protein	NA	NA	NA	NA
WP_121909506.1\|2962269_2962515_-	Arc family DNA-binding protein	A0A0M5M1J2	Salmonella_phage	1.2e-13	52.0
WP_121909504.1\|2962611_2962764_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_049199086.1\|2963760_2964168_-	hypothetical protein	NA	NA	NA	NA
WP_049199087.1\|2964158_2964941_-	hypothetical protein	NA	NA	NA	NA
WP_096043090.1\|2965191_2965881_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.1e-91	72.4
WP_096043089.1\|2965930_2966686_-	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	2.8e-106	78.9
WP_096043088.1\|2966750_2967119_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.1e-10	30.3
WP_096043087.1\|2967115_2967487_-	hypothetical protein	G0ZNE3	Cronobacter_phage	1.1e-39	65.0
WP_094960237.1\|2967488_2967830_-	hypothetical protein	NA	NA	NA	NA
WP_096043086.1\|2967829_2968228_-	hypothetical protein	I6S619	Salmonella_phage	2.3e-54	78.6
WP_004247764.1\|2968285_2968459_-	hypothetical protein	I6R9A3	Salmonella_phage	1.4e-08	51.8
WP_096043085.1\|2968468_2969563_-	hypothetical protein	G0ZND9	Cronobacter_phage	1.7e-144	68.6
WP_166465080.1\|2969575_2970019_-	hypothetical protein	I6S1Q2	Salmonella_phage	1.9e-46	68.0
WP_063073748.1\|2970024_2971299_-	hypothetical protein	G0ZND7	Cronobacter_phage	4.7e-154	63.9
WP_096043083.1\|2971302_2972232_-\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	1.7e-89	55.0
WP_063073746.1\|2972182_2973538_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	2.7e-163	64.4
WP_063073745.1\|2973537_2974782_-\|terminase	PBSX family phage terminase large subunit	A0A1V0E5Q3	Salmonella_phage	3.2e-187	74.2
WP_063073744.1\|2974762_2975203_-	hypothetical protein	Q716H4	Shigella_phage	1.7e-42	65.5
WP_063073743.1\|2975350_2975536_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	3.4e-21	73.8
WP_096043082.1\|2975538_2975751_-	hypothetical protein	NA	NA	NA	NA
WP_063073741.1\|2975848_2976535_-	Rha family transcriptional regulator	A0A192Y918	Salmonella_phage	1.3e-97	76.8
WP_096043081.1\|2976975_2977428_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	2.8e-53	81.2
WP_036976899.1\|2977429_2977762_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	4.4e-35	70.3
WP_004918415.1\|2977748_2978042_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_004916901.1\|2978038_2978428_-	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_096043080.1\|2978563_2979331_-	KilA-N domain-containing protein	G9BW66	Planktothrix_phage	1.3e-18	35.0
WP_036969493.1\|2979872_2980376_-	DUF1133 family protein	A0A1P8DTF1	Proteus_phage	4.0e-80	88.0
WP_063073738.1\|2980372_2980564_-	hypothetical protein	A0A1P8DTD3	Proteus_phage	6.6e-28	95.2
WP_063073737.1\|2980553_2980919_-	RusA family crossover junction endodeoxyribonuclease	E5AGG1	Erwinia_phage	1.3e-37	64.1
WP_063073736.1\|2980915_2981206_-	DUF1364 domain-containing protein	K7P6U2	Enterobacteria_phage	1.6e-38	78.9
WP_156868289.1\|2981198_2981351_-	hypothetical protein	NA	NA	NA	NA
WP_063073735.1\|2981443_2981893_-	hypothetical protein	A0A1P8DTF9	Proteus_phage	4.5e-75	95.3
WP_063073734.1\|2982014_2982239_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	1.4e-24	75.4
WP_096043079.1\|2982235_2982595_-	hypothetical protein	NA	NA	NA	NA
WP_096043078.1\|2982591_2983035_-	recombination protein NinB	A0A1P8DTD8	Proteus_phage	7.9e-32	90.4
WP_063073731.1\|2983383_2983677_-	hypothetical protein	A6N3G8	Burkholderia_virus	1.5e-18	56.9
WP_081213868.1\|2983690_2984026_-	hypothetical protein	A0A1C9LVV9	Vibrio_phage	3.2e-25	39.9
WP_060556819.1\|2984045_2984957_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.2e-97	60.9
WP_060556820.1\|2984967_2985654_-	DNA replication protein	A0A1P8DTF3	Proteus_phage	4.7e-108	87.7
WP_096043076.1\|2985650_2986589_-	replication protein	A0A1P8DTG2	Proteus_phage	1.8e-81	52.6
WP_096043075.1\|2986585_2987269_-	phage antirepressor KilAC domain-containing protein	A0A1P8DTE1	Proteus_phage	2.0e-114	94.7
WP_063073726.1\|2987290_2987623_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	3.5e-53	99.1
WP_063693416.1\|2987825_2988053_-	helix-turn-helix domain-containing protein	K7PHA1	Enterobacteria_phage	4.9e-22	68.0
WP_063693278.1\|2988161_2988860_+	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	5.4e-43	48.6
WP_063073724.1\|2989189_2990014_+	NYN domain-containing protein	A4JWQ6	Burkholderia_virus	9.5e-39	41.0
WP_166465078.1\|2990340_2990913_+	HNH endonuclease	C4ML07	Xanthomonas_virus	8.1e-21	37.5
WP_147383756.1\|2990928_2991417_-	hypothetical protein	NA	NA	NA	NA
WP_063073722.1\|2991609_2991798_+	hypothetical protein	A0A068C8G2	Acinetobacter_phage	3.7e-07	50.9
WP_063073721.1\|2991869_2992103_+	hypothetical protein	A0A1B0V7L5	Salmonella_phage	8.9e-11	54.5
WP_156868288.1\|2992230_2993127_+	cell envelope biogenesis protein TolA	A0A2I7QK72	Vibrio_phage	3.2e-16	45.8
WP_166465079.1\|2993182_2993338_+	hypothetical protein	NA	NA	NA	NA
WP_063073719.1\|2993345_2993600_+	hypothetical protein	NA	NA	NA	NA
WP_049199148.1\|2993596_2993818_+	hypothetical protein	NA	NA	NA	NA
WP_096043073.1\|2993814_2994741_+	recombinase RecT	F1C5B8	Cronobacter_phage	1.2e-109	66.6
WP_049206325.1\|2994780_2995401_+	hypothetical protein	A0A068CBG2	Acinetobacter_phage	1.2e-25	45.9
WP_096043072.1\|2995393_2996095_+	YqaJ viral recombinase family protein	A0A2R2Z325	Escherichia_phage	8.0e-71	58.1
WP_156868287.1\|2996084_2996633_+	single-stranded DNA-binding protein	A0A0A0P1Q9	Enterobacteria_phage	3.4e-53	78.7
WP_049212213.1\|2996648_2996987_+	hypothetical protein	NA	NA	NA	NA
WP_036932464.1\|2997020_2997347_+	hypothetical protein	NA	NA	NA	NA
WP_060558090.1\|2997382_2997670_+	hypothetical protein	A0A1B0UY37	Roseobacter_phage	5.3e-13	41.9
WP_156868286.1\|2997669_2998023_+	hypothetical protein	NA	NA	NA	NA
WP_174694362.1\|2998180_2998354_+	hypothetical protein	NA	NA	NA	NA
WP_174694363.1\|2998346_2998688_+	DUF2591 domain-containing protein	E9NID9	Enterobacter_phage	4.4e-14	38.8
WP_156868285.1\|2998674_2999277_+	DNA methyltransferase	G8C7S6	Escherichia_phage	2.1e-59	57.1
WP_156868284.1\|2999712_3000870_+\|integrase	tyrosine-type recombinase/integrase	A0A0M4R586	Salmonella_phage	8.0e-177	75.4
WP_017627899.1\|3001158_3002031_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	9.7e-34	36.8
3000890:3000936	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3273160 : 3282004

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245601.1\|3273160_3274729_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_012368337.1\|3275129_3275810_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3275906_3276482_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_004249446.1\|3276558_3277137_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004245605.1\|3277204_3278230_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3278264_3278720_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_017628547.1\|3278744_3279881_-	TerD family protein	NA	NA	NA	NA
WP_004250201.1\|3279881_3280466_-	tellurium resistance-associated protein TerZ	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_017628546.1\|3280858_3282004_+	phosphoribosyltransferase domain-containing protein	A0A172Q0Y1	Acinetobacter_phage	4.5e-31	27.2

DBSCAN-SWA_10

3371548 : 3409926

Salmonella_phage(25.0%)

integrase,protease,transposase,holin

attL 3363075:3363089|attR 3411974:3411988

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3363075:3363089	attL	NA	NA	NA	NA
WP_109880364.1\|3371548_3373579_-\|protease	protease Lon-related BREX system protein BrxL	NA	NA	NA	NA
WP_060554886.1\|3373801_3376471_-	BREX-1 system phosphatase PglZ type A	NA	NA	NA	NA
WP_060554887.1\|3376470_3380088_-	BREX-1 system adenine-specific DNA-methyltransferase PglX	NA	NA	NA	NA
WP_060554888.1\|3380244_3383922_-	BREX system P-loop protein BrxC	NA	NA	NA	NA
WP_004249341.1\|3383940_3384525_-	DUF1788 domain-containing protein	NA	NA	NA	NA
WP_049194747.1\|3384521_3385121_-	DUF1819 family protein	NA	NA	NA	NA
WP_156868342.1\|3385130_3386057_-	WYL domain-containing protein	NA	NA	NA	NA
WP_001339197.1\|3386359_3387568_+\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_072156948.1\|3387908_3388103_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_001520030.1\|3388207_3388927_-	hypothetical protein	NA	NA	NA	NA
WP_049218683.1\|3389027_3389321_-	YqjK-like family protein	NA	NA	NA	NA
WP_049218680.1\|3389998_3391198_-	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA
WP_049218678.1\|3391499_3391901_+	PPC domain-containing protein	NA	NA	NA	NA
WP_060555124.1\|3392317_3392719_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_060555123.1\|3392800_3393154_-	hypothetical protein	NA	NA	NA	NA
WP_060555122.1\|3393225_3393474_-	DUF883 family protein	NA	NA	NA	NA
WP_060555121.1\|3393923_3394271_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_060555120.1\|3394270_3394570_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_060555126.1\|3394690_3394879_+	DUF5397 family protein	NA	NA	NA	NA
WP_060555119.1\|3394882_3395161_+	virulence factor	NA	NA	NA	NA
WP_060555118.1\|3395633_3397124_+	YadA-like family protein	S4TRP0	Salmonella_phage	4.6e-07	33.3
WP_060555117.1\|3397535_3397742_-	hypothetical protein	NA	NA	NA	NA
WP_114141483.1\|3397738_3398323_-	AAA family ATPase	A0A222ZPP5	Mycobacterium_phage	9.5e-09	30.1
WP_060555115.1\|3398829_3399348_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_109880811.1\|3399774_3400425_-	hypothetical protein	NA	NA	NA	NA
WP_001520048.1\|3400466_3400775_-	hypothetical protein	NA	NA	NA	NA
WP_001339175.1\|3401752_3402961_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	2.3e-235	99.8
WP_004249335.1\|3403244_3404153_-	DNA polymerase III subunit epsilon	A0A2H4P6W5	Pseudomonas_phage	2.8e-07	27.5
WP_156868445.1\|3404641_3404794_-	hypothetical protein	NA	NA	NA	NA
WP_004249334.1\|3404792_3405242_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A218MND2	uncultured_virus	4.1e-36	57.1
WP_036973679.1\|3405249_3406518_+	translesion error-prone DNA polymerase V subunit UmuC	I6RSM4	Salmonella_phage	1.2e-141	60.2
WP_008305549.1\|3406528_3406972_-	hypothetical protein	NA	NA	NA	NA
WP_000497807.1\|3407436_3408411_+	ParM/StbA family protein	NA	NA	NA	NA
WP_004249313.1\|3408413_3408683_+	hypothetical protein	NA	NA	NA	NA
WP_004249312.1\|3408684_3409926_+\|integrase	integrase family protein	A0A291AWU1	Escherichia_phage	3.8e-76	39.1
3411974:3411988	attR	NA	NA	NA	NA

DBSCAN-SWA_11

3969800 : 4013452

Enterobacteria_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063693206.1\|3969800_3971009_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	3.4e-186	80.3
WP_053828396.1\|3971031_3971448_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	1.1e-43	60.6
WP_004249011.1\|3972268_3972787_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_017628614.1\|3972859_3975031_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_017628613.1\|3976300_3979345_+	hypothetical protein	NA	NA	NA	NA
WP_017628612.1\|3979344_3980283_+	hypothetical protein	NA	NA	NA	NA
WP_004249835.1\|3980275_3980545_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_017628611.1\|3980736_3981660_+	hypothetical protein	NA	NA	NA	NA
WP_012368584.1\|3981749_3982427_-	hypothetical protein	NA	NA	NA	NA
WP_004249837.1\|3982519_3984127_-	hypothetical protein	NA	NA	NA	NA
WP_017628610.1\|3984140_3986636_-	CS1-pili formation C-terminal domain-containing protein	NA	NA	NA	NA
WP_004246670.1\|3986658_3987342_-	hypothetical protein	NA	NA	NA	NA
WP_004246669.1\|3987431_3988055_-	common pilus major fimbrillin subunit EcpA	NA	NA	NA	NA
WP_004246668.1\|3988194_3988515_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017628609.1\|3989562_3990597_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	7.4e-65	41.3
WP_001274561.1\|3991139_3991985_-	DUF4942 domain-containing protein	NA	NA	NA	NA
WP_060589331.1\|3992069_3992357_-	DUF957 domain-containing protein	NA	NA	NA	NA
WP_000761716.1\|3992286_3992775_-	hypothetical protein	NA	NA	NA	NA
WP_001094437.1\|3992771_3993149_-	toxin	NA	NA	NA	NA
WP_001390338.1\|3993195_3993573_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_000692345.1\|3993735_3993957_-	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001535682.1\|3994019_3994496_-	RadC family protein	NA	NA	NA	NA
WP_000855064.1\|3994511_3994985_-	antirestriction protein	A9J566	Pseudomonas_phage	3.3e-12	29.6
WP_001535681.1\|3995326_3996145_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	3.6e-46	39.7
WP_001323397.1\|3996299_3996458_-	DUF905 family protein	NA	NA	NA	NA
WP_000820574.1\|3996528_3999375_-	autotransporter adhesin Ag43	NA	NA	NA	NA
WP_001069760.1\|3999747_4000620_-	GTPase family protein	NA	NA	NA	NA
WP_000241617.1\|4000718_4001591_-	hypothetical protein	NA	NA	NA	NA
WP_164076301.1\|4003005_4004218_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.9e-168	99.3
WP_001387788.1\|4005491_4006094_-	hypothetical protein	NA	NA	NA	NA
WP_072153745.1\|4006188_4006467_-	AlpA family transcriptional regulator	NA	NA	NA	NA
WP_000148641.1\|4008057_4008627_+	inovirus Gp2 family protein	NA	NA	NA	NA
WP_000271020.1\|4008792_4009176_+	hypothetical protein	NA	NA	NA	NA
WP_032181455.1\|4009172_4009598_+	hypothetical protein	NA	NA	NA	NA
WP_000080195.1\|4010077_4011691_-\|transposase	IS66-like element ISEc23 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.0e-182	63.6
WP_000624711.1\|4011721_4012072_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.0e-39	65.5
WP_000981822.1\|4012068_4012473_-\|transposase	transposase	Q6H9S5	Enterobacteria_phage	1.4e-30	84.3
WP_096043063.1\|4012435_4013452_+\|transposase	IS5-like element IS5 family transposase	Q38213	Escherichia_phage	7.0e-185	99.1

DBSCAN-SWA_12

4018596 : 4058425

Escherichia_phage(30.77%)

integrase,transposase

attL 4015610:4015623|attR 4062223:4062236

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4015610:4015623	attL	NA	NA	NA	NA
WP_001067855.1\|4018596_4019301_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000027057.1\|4019885_4020746_+	class A broad-spectrum beta-lactamase TEM-1	Q1MVP3	Enterobacteria_phage	4.6e-161	100.0
WP_001067855.1\|4021343_4022048_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000018329.1\|4022237_4023053_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|4023203_4023908_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000240536.1\|4024663_4025515_+	replication protein	NA	NA	NA	NA
WP_001043265.1\|4025822_4026638_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA
WP_096043062.1\|4026698_4027502_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	1.6e-14	28.7
WP_000480968.1\|4027501_4028338_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA
WP_028697649.1\|4028444_4028921_+	TnpR	NA	NA	NA	NA
WP_001339197.1\|4028982_4030191_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_000557454.1\|4031405_4032266_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA
WP_000587837.1\|4032278_4032821_+	AAA family ATPase	NA	NA	NA	NA
WP_000951934.1\|4033302_4033494_-	hypothetical protein	NA	NA	NA	NA
WP_000248278.1\|4033517_4033745_+	hypothetical protein	NA	NA	NA	NA
WP_000080860.1\|4033795_4034932_+	DUF3883 domain-containing protein	NA	NA	NA	NA
WP_000179844.1\|4037476_4039156_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001381192.1\|4039158_4040151_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_000376623.1\|4040119_4040620_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|4040747_4041587_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000679427.1\|4041580_4041928_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_000503573.1\|4042133_4042922_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA
WP_001389366.1\|4043052_4043526_-	trimethoprim-resistant dihydrofolate reductase DfrA17	A0A1B2IBQ4	Erwinia_phage	7.6e-17	33.1
WP_000845048.1\|4043683_4044697_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_000454193.1\|4044899_4045250_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_001067855.1\|4045680_4046385_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001300294.1\|4047774_4048443_-	EAL domain-containing protein	NA	NA	NA	NA
WP_000993386.1\|4048478_4048715_-	broad-spectrum mercury transporter MerE	NA	NA	NA	NA
WP_001277456.1\|4048711_4049074_-	mercury resistance co-regulator MerD	NA	NA	NA	NA
WP_000105636.1\|4049091_4050786_-	mercury(II) reductase	A0A2K5B2C5	Erysipelothrix_phage	8.8e-39	27.6
WP_001340589.1\|4050837_4051260_-	organomercurial transporter MerC	NA	NA	NA	NA
WP_000732292.1\|4051295_4051571_-	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA
WP_001294663.1\|4051584_4051935_-	mercuric transport protein MerT	NA	NA	NA	NA
WP_000429836.1\|4052006_4052441_+	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_169774393.1\|4054409_4055213_+\|transposase	IS5 family transposase	A0A0M5M147	Mycobacterium_phage	4.4e-33	38.6
WP_119563495.1\|4055442_4056396_+	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_001218908.1\|4057240_4058425_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	3.4e-162	69.9
4062223:4062236	attR	NA	NA	NA	NA

DBSCAN-SWA_13

4089472 : 4146296

Helicobacter_phage(15.38%)

tRNA,integrase,transposase

attL 4112788:4112802|attR 4150622:4150636

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246627.1\|4089472_4090501_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_036895833.1\|4091770_4092187_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.6e-45	62.0
WP_012368600.1\|4092274_4092949_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_004249861.1\|4093066_4093690_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_004249862.1\|4094057_4096016_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_004246621.1\|4096180_4096492_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_004246620.1\|4096488_4098144_+	cation acetate symporter	NA	NA	NA	NA
WP_017628600.1\|4098466_4100098_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_063693479.1\|4100137_4101346_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	6.2e-188	80.8
WP_017628598.1\|4101417_4101786_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	4.2e-39	62.8
WP_012368603.1\|4101872_4102565_-	lactate utilization protein C	NA	NA	NA	NA
WP_017628597.1\|4102568_4103987_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_017628596.1\|4103977_4104715_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004249867.1\|4110614_4111301_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_012368605.1\|4111381_4112779_+	multidrug transporter subunit MdtD	NA	NA	NA	NA
4112788:4112802	attL	NA	NA	NA	NA
WP_004246607.1\|4112860_4113787_-	ribokinase	NA	NA	NA	NA
WP_017628746.1\|4114067_4115567_+	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	3.0e-22	38.0
WP_004246605.1\|4115574_4117032_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004246604.1\|4117032_4118025_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246603.1\|4118185_4118647_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_004249871.1\|4118746_4119187_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_017628745.1\|4119566_4121465_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_004246599.1\|4121461_4122088_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246598.1\|4122703_4123081_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246597.1\|4123112_4123937_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246596.1\|4123982_4124222_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246595.1\|4124283_4124754_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246594.1\|4124766_4125300_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_004246592.1\|4125314_4126856_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246591.1\|4126913_4127777_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246589.1\|4127811_4129194_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246588.1\|4129215_4129632_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_004246587.1\|4129782_4131156_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_004246586.1\|4131313_4133140_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	1.2e-131	44.6
WP_001029679.1\|4133299_4134121_+	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_000267723.1\|4134107_4136216_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001276994.1\|4136212_4137880_+	AAA family ATPase	NA	NA	NA	NA
WP_001243518.1\|4137882_4139409_+\|transposase	transposase	NA	NA	NA	NA
WP_000251879.1\|4139409_4141026_+\|transposase	transposase	NA	NA	NA	NA
WP_001271300.1\|4141256_4141634_-	hypothetical protein	NA	NA	NA	NA
WP_000119696.1\|4142043_4142415_-	hypothetical protein	NA	NA	NA	NA
WP_001444089.1\|4142475_4142973_-	hypothetical protein	NA	NA	NA	NA
WP_001206315.1\|4143048_4143837_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000704156.1\|4143894_4144419_-	streptothricin N-acetyltransferase Sat2	E4ZFP7	Streptococcus_phage	4.2e-16	38.9
WP_000777554.1\|4144513_4144987_-	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_000071896.1\|4145318_4145855_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|4145969_4146296_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
4150622:4150636	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP045257.1|WP_080047921.1|1290266_1290677_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP045257.1|WP_104836579.1|1290833_1291250_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP045257.1|WP_104836578.1|1291239_1291491_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP045257.1|WP_080047921.1|1290266_1290677_-|hypothetical-protein

1290266_1290677_-

136 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44642857142857145	0.9655172413793104

1269124-1361448

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045257_2	TypeI-E	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	1303736-1303767	0

1. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_CP045257 position: 1303736-1303767, mismatch: 0

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaactgctaccggtgcgcgtctgcagtct	Protospacer
********************************

NZ_CP045257.1|WP_104836579.1|1290833_1291250_-|hypothetical-protein

1290833_1291250_-

138 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44642857142857145	0.9655172413793104

1269124-1361448

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045257_2	TypeI-E	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	1303736-1303767	0

1. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_CP045257 position: 1303736-1303767, mismatch: 0

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaactgctaccggtgcgcgtctgcagtct	Protospacer
********************************

NZ_CP045257.1|WP_104836578.1|1291239_1291491_-|hypothetical-protein

1291239_1291491_-

83 aa aa

HTH_XRE

Identity	Hit_domain_coverage
0.44642857142857145	0.9655172413793104

1269124-1361448

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP045257_2	TypeI-E	2.1\|2522535\|32\|NZ_CP045257\|CRISPRCasFinder	2522535-2522566	32	1303736-1303767	0

1. spacer 2.1|2522535|32|NZ_CP045257|CRISPRCasFinder matches to NZ_CP045257 position: 1303736-1303767, mismatch: 0

tagaaactgctaccggtgcgcgtctgcagtct	CRISPR spacer
tagaaactgctaccggtgcgcgtctgcagtct	Protospacer
********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP045257

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information