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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP050332 Pseudomonas aeruginosa strain DVT413 chromosome, complete genome 6 crisprs csa3,RT,DEDDh,cas3,PD-DExK,DinG,WYL 1 0 8 0

Results visualization

1. NZ_CP050332
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_1 62167-62314 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_2 410006-410119 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_3 852955-853068 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_4 3443821-3443915 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_5 3450754-3450848 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP050332_6 6141044-6141135 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP050332_3 3.1|852983|58|NZ_CP050332|CRISPRCasFinder 852983-853040 58 NZ_CP050332.1 3840179-3840236 1 0.983

1. spacer 3.1|852983|58|NZ_CP050332|CRISPRCasFinder matches to position: 3840179-3840236, mismatch: 1, identity: 0.983

cggataacgccggtggcgttatccgccctacggcccgactacggggccgcgggacgca	CRISPR spacer
cggataacgccggtggcgttatccgccctacggcccgactccggggccgcgggacgca	Protospacer
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 707522 : 763178 56 uncultured_Caudovirales_phage(28.0%) tRNA,holin,plate,tail NA
DBSCAN-SWA_2 1516603 : 1525632 8 Bacillus_phage(33.33%) NA NA
DBSCAN-SWA_3 2468136 : 2497455 38 Pseudomonas_phage(66.67%) transposase,holin,terminase,tRNA,integrase,tail attL 2468423:2468437|attR 2471873:2471887
DBSCAN-SWA_4 2775306 : 2784231 14 uncultured_Caudovirales_phage(71.43%) tRNA NA
DBSCAN-SWA_5 3241095 : 3280364 33 Planktothrix_phage(33.33%) plate,tail NA
DBSCAN-SWA_6 4441792 : 4481281 54 Pseudomonas_phage(92.45%) tail,integrase,head,transposase attL 4439037:4439053|attR 4483650:4483666
DBSCAN-SWA_7 4923371 : 4962200 51 Pseudomonas_phage(100.0%) transposase,lysis,protease,head,integrase attL 4925530:4925544|attR 4935120:4935134
DBSCAN-SWA_8 5208036 : 5293427 103 Pseudomonas_virus(69.57%) portal,integrase,capsid,protease,holin,terminase,tRNA,head,plate,tail attL 5255946:5255990|attR 5293595:5293639
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage