CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP054692	Treponema phagedenis strain KS1 chromosome, complete genome	20 crisprs	cas9,csa3,cas3,DinG,DEDDh	8	0	8	7

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP054692_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_1

182001-182132

Orphan

Consensus_repeat	Method
CTCAATTCTGCTTGGAACCACGGGCGTCCATGCCCGTTCTGATTTTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_1

>merge|NZ_CP054692|1|182001-182132|CRISPRCasFinder
CTCAATTCTGCTTGGAACCACGGGCGTCCATGCCCGTTCTGATTTTGACGTCCATAGGGATGCTATTTAGCTAGTTTTCAAACCTCAATTCTGCTTGGAACCACGGGCGTCCATGCCCGTTCTGAGTTTTGA

>NZ_CP054692|1|1|182001-182132|CRISPRCasFinder
CTCAATTCTGCTTGGAACCACGGGCGTCCATGCCCGTTCTGATTTTGAC	GTCCATAGGGATGCTATTTAGCTAGTTTTCAAAC
CTCAATTCTGCTTGGAACCACGGGCGTCCATGCCCGTTCTGAGTTTTGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_156009222.1\|193398_193563_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002696371.1\|183175_183745_-\|cytidylate-kinase-family-protein	unknown	unknown	gnl\|CDD\|235244
NZ_CP054692.1\|WP_002696375.1\|184688_186128_-\|UDP-N-acetylmuramate--L-alanine-ligase	unknown	unknown	gnl\|CDD\|273433
NZ_CP054692.1\|WP_174896904.1\|181124_181487_-\|transposase	unknown	unknown	unknown
NZ_CP054692.1\|WP_174896903.1\|180310_181141_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP054692.1\|WP_156009222.1\|191263_191428_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752887.1\|174947_176573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752886.1\|174220_174493_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752184.1\|189117_189399_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP054692.1\|WP_174896905.1\|181498_181699_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002700602.1\|177930_178155_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002696373.1\|183804_184671_-\|YicC-family-protein	unknown	unknown	gnl\|CDD\|236993
NZ_CP054692.1\|WP_024752894.1\|182349_183174_-\|A/G-specific-adenine-glycosylase	unknown	unknown	gnl\|CDD\|224115
NZ_CP054692.1\|WP_174896903.1\|190403_191234_-\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP054692.1\|WP_174896906.1\|191992_192643_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379256
NZ_CP054692.1\|WP_044634710.1\|173688_174231_+\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|179304
NZ_CP054692.1\|WP_024752889.1\|178215_178776_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752888.1\|176983_177817_+\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP054692.1\|WP_024752895.1\|186934_188923_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP054692.1\|WP_148889195.1\|179009_180263_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024752184.1\|189117_189399_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.32031e-06
NZ_CP054692.1\|WP_174896903.1\|180310_181141_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.70837e-38
NZ_CP054692.1\|WP_002696375.1\|184688_186128_-\|UDP-N-acetylmuramate--L-alanine-ligase	gnl\|CDD\|273433	TIGR01082, UDP-N-acetylmuramate--L-alanine_ligase, UDP-N-acetylmuramate--L-alanine ligase. This model describes the MurC protein in bacterial peptidoglycan (murein) biosynthesis. In a few species (Mycobacterium leprae, the Chlamydia), the amino acid may be L-serine or glycine instead of L-alanine. A related protein, UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase (murein tripeptide ligase) is described by model TIGR01081. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	9.45556e-166
NZ_CP054692.1\|WP_174896906.1\|191992_192643_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	4.49477e-09
NZ_CP054692.1\|WP_002696371.1\|183175_183745_-\|cytidylate-kinase-family-protein	gnl\|CDD\|235244	PRK04182, PRK04182, cytidylate kinase; Provisional.	5.42576e-64
NZ_CP054692.1\|WP_002696373.1\|183804_184671_-\|YicC-family-protein	gnl\|CDD\|236993	PRK11820, PRK11820, YicC family protein.	8.53736e-91
NZ_CP054692.1\|WP_024752894.1\|182349_183174_-\|A/G-specific-adenine-glycosylase	gnl\|CDD\|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	2.8947e-75
NZ_CP054692.1\|WP_044634710.1\|173688_174231_+\|signal-peptidase-II	gnl\|CDD\|179304	PRK01574, lspA, signal peptidase II; Provisional.	1.67632e-60
NZ_CP054692.1\|WP_174896903.1\|190403_191234_-\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.70837e-38
NZ_CP054692.1\|WP_024752888.1\|176983_177817_+\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	1.30578e-101
NZ_CP054692.1\|WP_024752895.1\|186934_188923_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP054692.1\|WP_148889195.1\|179009_180263_+\|ISNCY-family-transposase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	5.61056e-09

>NZ_CP054692.1|WP_174896905.1|181498_181699_-|hypothetical-protein
MTIQKKIILTTTIVCFLCATVIGANILIISTRNLEKNINASNAVSAKYLLYSFGGGYLPPKVGHEQ
>NZ_CP054692.1|WP_174896904.1|181124_181487_-|transposase
MERKQHDEQFKAQVRAEYLRGALGYKKLAKKYGVTRDVIRGILLAGRRGSTMKIDLEKELAVFKPSGDKELDHYKHACATGWSMRKDLNRKLKSSNKIKKNSSAYNQGFTQKEIPGEKDL
>NZ_CP054692.1|WP_174896903.1|180310_181141_-|IS3-family-transposase
MKKICEITGIARSVYYSNKDNTTKHEKDMIICEAIKKLPKKIQKTAGAKPKSKLLSVMLDRPINHKRVERIAKKYGLQAKIRRRKHPKEYYKQKKEERKNLPSNILNREFVATTFLSKLVTDISYFRVKGGWLYLSPILDLYNREIVAYACSRHVDAQLAVDTVTHRAEKYSLEGVLLHSDQGATYTSHAYREKLTELGMIQSMSRRGNCWDNACIENFFGTIKCESGYYDTLKNGLLTYKQMEELIGKYIEFFNNERIQKKLGWKSPVDFRTQVA
>NZ_CP054692.1|WP_148889195.1|179009_180263_+|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGAVAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTGEYQLQLSYSTLRRILLSHGICSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRHITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNHLFKIEQNKFGAGTMVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP054692.1|WP_024752889.1|178215_178776_-|hypothetical-protein
MKVKKLSVFIGLVIFIFAALTSSCILLSLSETGGFYDEDYENSVARKEISVITLNRWLKGYELRLNSPTSLSGKQLMEVTKLCIKSGDLNNLYIIDENSVLSFATMQVKFIMDGQPFYCQFEYSISNSGNFTFKPIKVMDAVTDNPYKKSIYASDEKNIKRYFIDLLEQTFKNIKKSVINRSKDFT
>NZ_CP054692.1|WP_002700602.1|177930_178155_+|hypothetical-protein
MKTLHCDICKKELVNPIKGRTYWHIREFDLCEDCKDGIEFKLRHILRDHSPFSQAWYENEFINLIEKGTVAKRP
>NZ_CP054692.1|WP_024752888.1|176983_177817_+|nucleoside-triphosphate-pyrophosphohydrolase
MNNPSEKFTALYEVIKQLRAPDGCPWDREQTPLSLRSTLLEETYEALEAIEETEIKNQSSLHAAEELGDILLNVVMIAYMYEQREDFSVADMLQVLTEKLIRRHPHVFGQTAGFAGPTDNAKPVTADKVLDQWEEIKKTLENKREESLLDSIPKNFPPLLRAFKLQKKASKNGFDWNDYSGAFSKFEEECAEFKESIEENNQNHIEEEFGDVLFSLVNIARFLKIDPAVALSRSNTKFESRFRFIEKKMNAENLKMTAENCKIMDKFWEEAKTNTNE
>NZ_CP054692.1|WP_024752887.1|174947_176573_-|hypothetical-protein
MADLDPDLLALLDDVPPVMSGGLNDIPMLSQSREASGLAARDASEVDLTEAGFPEIKEFSNKKPHTLFDTAEFYKQVLAEESDRGQRIHALLTKYLPTKDPKDRSVYRQQLITAYWNLISHIALKAASGTASQEKKYALRFGMLLPTLLTPEQKDIFAKVIDENTYNQPIYYLDEWFGAIGAAKIAPSSTDEVKVKKSDDALRFQQLYSKAQGKLQSAESLLRAKSDERLRAEDAIKQKIDGLFTHETIPGIPGVKEGFNAGQKRSFTELSELLRKLSGLDKELQNFLASYQSAEADVRTLKERVETAGDGTANVSGAESEFTTIRQMIKMSCGRQGNHFPILTREYFRSSSNEIGTRENVLNVMRWIESIDPEAYCRQYRQQLNRIPPFVILLPSYGDIGFCWEPFDRYNRITSRGRIGIPMYPKNIKIALLTATADLRWQVAKEKASYYWMEEGLTGNYYQWVQAQKLKGDIKEHFINDYLLWMLKESEGIQKLDKEVRNIFWRYMPFAQHVKDELKNRAAVYQELCQKDLNRQMSDGY
>NZ_CP054692.1|WP_024752886.1|174220_174493_+|hypothetical-protein
MKTKKRNTILFMIISTVFNILLSLGCIFFFWVLIILAAKLINPKILAALPIAFIAGLVLSFILYSRILRWAIKRFDLESKLESLFSKKKK
>NZ_CP054692.1|WP_044634710.1|173688_174231_+|signal-peptidase-II
MMSKILKNKEFFLPLLLTVVVIVLDQITKALVVAKIPPYGLGFQLFGDFFRIVHVYNTGAAFSLGHDLNPLASFLFLRILPLLIMIVVVVIYFKTKSFSYPQRWFIAGIIGGGFGNLIDRFFNSKGVVDFIDVKFYGIFGMQRWPTFNIADSSIVICGILLIISFIIQERKMKKEVTNEN
>NZ_CP054692.1|WP_024752894.1|182349_183174_-|A/G-specific-adenine-glycosylase
MTLSSKQIEDFQKRIINYYKAHGRNFPWRETADPYEIMVSEFMLQQTQTERVVPKYLGWLERFPTVKDLADADFMSVLTMWSGLGYNRRARFLHEAAKKIVSEYQGKVPANPQDLQKLPGIGSYTAAAISVFAYNNALALIETNIRSVFLFFFFPDKEKVHDTEIFKLITDVLYTENPRLWYYALMDYGAELKKRIKNPNRRSKHYTKQSKFEGSVRQMRGAILRSLQNFEKPAAKSELSATIDIELTHFETALSALIDEGFVAETDEGYCIKN
>NZ_CP054692.1|WP_002696371.1|183175_183745_-|cytidylate-kinase-family-protein
MKEDYRVPQDKILRIAISGASGCGNTTVSGLLAEKLRLPCINYTFKNIAKELNIPFTEIIQRAKTDFSYDKKVDTKQVELAQKSSCVLGSRLAIWLLKEADLKVYLFASEEERAKRVQKRDGGELSEIKAFTAMRDKEDTRRYKMLYNIDNSNYQFADLIIDTEKKSPEEIVELIISCLLSKNLIVKTA
>NZ_CP054692.1|WP_002696373.1|183804_184671_-|YicC-family-protein
MKSMTGYANLETTIDNFEIACEIKSYNSRFLDLNINLPFWMTRFESLIRAHCTKQILRGKVELNFRIKNANINMNVSANPQMAKAYYDAVKTIADTINLQDEISLSLIIKQEGVLQIDRVFNAEIWESKLPPILDTLLERYDSFRHTEGAALAKDILNMLQKIEYSIEEIDRFSAQMEAIFTKNLQDKFTELTNSQFDEQRVLQEVAALLIKYTINEEVVRLKAHVAALKKELETNKTSGKKIDFICQEINREINTIGSKNQLIEIAQAVVNVKDALENIREQARNLE
>NZ_CP054692.1|WP_002696375.1|184688_186128_-|UDP-N-acetylmuramate--L-alanine-ligase
MKQSGLPADVNGFKIHMIGIKGTGMSALAELLVSRGAVITGSDVADEFYTDEVLKHLQIAVTAPFSAKNIPPDTQLVIYSAAYTPEENEELHEAFMRSLPTLSYPKALGDFSRHSYSCGIAGVHGKTTTTGIVGTLVKALDLDASVLAGSMIANFGNSCTMIHGDSFFIAETCEYKKHFLNFYPKKIVLTSVESDHQDFYPQYEDILAAFLQYIDRLPQFSEIFYCADDPGAKEAINLAFSSRPDLIYIPYGESVSSEFGVKIHGVRDEKLYFSLKGFAGEFYLTVPGHHNVLNAAAAIALVLSLVKLERKETTINDITIIRKALASFKGAKRRSEIVGEAKGILFMDDYAHHPTAIKTTLKGLKEFYPNRRIIVDFMSHTYSRTAALLNEFSQAFSSADEIILHKIYASAREVYHGEVTGRQLFELTKKSCRKTYYYEEVMDAESFLEKELQSGDLFITMGAGDNWKLGRTLYEKFSK
>NZ_CP054692.1|WP_024752895.1|186934_188923_+|excinuclease-ABC-subunit-B
MKQFELISDYAPSGDQPEAIRQLADGVLAGDRFQTLKGVTGSGKTFTMANIIQAVQKPTLIISHNKTLAAQLYREFKGFFPHNAVEYFVSYYDYYQPEAYVPARDLYIEKDASINDEIDRLRLSATFSLMERRDVIVVSTVSCIYGLGLPESWRDLRITIEKGQTVDMENLKRQLVSLQYERNDAVLERGRFRLKGDVLEVFPAYMEEAYRIEFDWEEIVRIRRFHPISGEISTEFEELSIYPAKHFVLKEDAIPTALVRIRKELDDRLAVLRAQNKLLEAERLKTRTEYDIEMLSEMGYCPGIENYSAPIANRKPGEPPATLFHYFPKDFLLFMDESHVTFPQVGAMYEGDRSRKQNLVDFGFRLPCALDNRPLKINEFESMLNQAIFVSATPGPKEIQYSTRIVEQLIRPTGLLDPILEVHKSEGQMEDIYREIQKRIVVGERSLILTLTKKMAEDLTDYLLGLGLKVKYIHSEIETIERVEILKGLRAGEFDVLIGINLLREGIDLPEVSFIGILDADKIGFLRSTTSLIQIVGRAARNENGKVIMYADRISDAMRETITETERRRSIQQAYNAAHGITPKTIKKAIEDILVRENELKKEAAQAETEPLINSFNLLVPADRKKLIKKLEQQMSAFADELRFEEAAAVRDKIEEIKRLST
>NZ_CP054692.1|WP_024752184.1|189117_189399_+|transposase
MRRYSQEFKQQALQLSDEIGTKEAAKNLGISYGTLTDWRKTKNRYKASDGAATAKAIVLDERERQLQREIKELKEANEILQGALAFFVKGWKK
>NZ_CP054692.1|WP_174896903.1|190403_191234_-|IS3-family-transposase
MKKICEITGIARSVYYSNKDNTTKHEKDMIICEAIKKLPKKIQKTAGAKPKSKLLSVMLDRPINHKRVERIAKKYGLQAKIRRRKHPKEYYKQKKEERKNLPSNILNREFVATTFLSKLVTDISYFRVKGGWLYLSPILDLYNREIVAYACSRHVDAQLAVDTVTHRAEKYSLEGVLLHSDQGATYTSHAYREKLTELGMIQSMSRRGNCWDNACIENFFGTIKCESGYYDTLKNGLLTYKQMEELIGKYIEFFNNERIQKKLGWKSPVDFRTQVA
>NZ_CP054692.1|WP_156009222.1|191263_191428_-|hypothetical-protein
MKIDLEKELAVFKPSGDKELDHYKHACAYWMEYAKRLEQEIEKQQQDKKKFKCI
>NZ_CP054692.1|WP_174896906.1|191992_192643_-|helix-turn-helix-domain-containing-protein
MKLFMSIDQITRGHVIANCLEGGCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGIYSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLRVLKLQFYNFVLILLNIGYLCPVFDICGSLP
>NZ_CP054692.1|WP_156009222.1|193398_193563_+|hypothetical-protein
MKIDLEKELAVFKPSGDKELDHYKHACAYWMEYAKRLEQEIEKQQQDKKKFKCI

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Crispr_ID: NZ_CP054692_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_2

277614-277708

Orphan

Consensus_repeat	Method
TGTCAAAAACTAAACCACGAGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_2

>merge|NZ_CP054692|2|277614-277708|CRISPRCasFinder
TGTCAAAAACTAAACCACGAGTTTGAAAACTCCCTGTTGTAAAAGGAGCCCCGGTTTAGTTTTGACGTTCATGTCAAAAACTAAACCACGAGTTT

>NZ_CP054692|2|2|277614-277708|CRISPRCasFinder
TGTCAAAAACTAAACCACGAGTTT	GAAAACTCCCTGTTGTAAAAGGAGCCCCGGTTTAGTTTTGACGTTCA
TGTCAAAAACTAAACCACGAGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002700166.1\|278241_278691_+\|ribosome-maturation-factor-RimP	unknown	unknown	gnl\|CDD\|237774
NZ_CP054692.1\|WP_024751857.1\|267108_268635_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|293739
NZ_CP054692.1\|WP_024751866.1\|276193_277324_-\|tRNA-guanosine(34)-transglycosylase-Tgt	unknown	unknown	gnl\|CDD\|234642
NZ_CP054692.1\|WP_002700155.1\|285439_285709_+\|30S-ribosomal-protein-S15	unknown	unknown	gnl\|CDD\|180170
NZ_CP054692.1\|WP_148878694.1\|272079_272949_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751871.1\|284605_285436_+\|FAD-synthetase-family-protein	unknown	unknown	gnl\|CDD\|185679
NZ_CP054692.1\|WP_024751873.1\|287897_288338_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|234802
NZ_CP054692.1\|WP_024751860.1\|270857_271844_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|224232
NZ_CP054692.1\|WP_081718616.1\|268641_270186_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|293739
NZ_CP054692.1\|WP_024751870.1\|283594_284599_+\|tRNA-pseudouridine(55)-synthase-TruB	unknown	unknown	gnl\|CDD\|211339
NZ_CP054692.1\|WP_024751862.1\|272963_273281_+\|DUF4325-domain-containing-protein	unknown	unknown	gnl\|CDD\|379507
NZ_CP054692.1\|WP_044634930.1\|285795_287898_+\|polyribonucleotide-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|236995
NZ_CP054692.1\|WP_002700161.1\|283230_283608_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP054692.1\|WP_174896917.1\|273785_274634_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	unknown	unknown	gnl\|CDD\|225509
NZ_CP054692.1\|WP_024751868.1\|280175_282866_+\|translation-initiation-factor-IF-2	unknown	unknown	gnl\|CDD\|235401
NZ_CP054692.1\|WP_024751874.1\|288350_289484_+\|YjgP/YjgQ-family-permease	unknown	unknown	gnl\|CDD\|367632
NZ_CP054692.1\|WP_024751859.1\|270483_270861_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002700173.1\|274639_276184_-\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|379311
NZ_CP054692.1\|WP_002700175.1\|273277_273718_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751867.1\|278701_280168_+\|transcription-termination/antitermination-protein-NusA	unknown	unknown	gnl\|CDD\|236410

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002700166.1\|278241_278691_+\|ribosome-maturation-factor-RimP	gnl\|CDD\|237774	PRK14637, PRK14637, ribosome maturation factor RimP.	2.30972e-58
NZ_CP054692.1\|WP_024751857.1\|267108_268635_+\|LTA-synthase-family-protein	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	3.40645e-41
NZ_CP054692.1\|WP_024751860.1\|270857_271844_+\|radical-SAM-protein	gnl\|CDD\|224232	COG1313, PflX, Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins [General function prediction only].	1.00462e-80
NZ_CP054692.1\|WP_002700155.1\|285439_285709_+\|30S-ribosomal-protein-S15	gnl\|CDD\|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	2.81668e-44
NZ_CP054692.1\|WP_024751873.1\|287897_288338_+\|dUTP-diphosphatase	gnl\|CDD\|234802	PRK00601, dut, dUTP diphosphatase.	6.43768e-76
NZ_CP054692.1\|WP_024751866.1\|276193_277324_-\|tRNA-guanosine(34)-transglycosylase-Tgt	gnl\|CDD\|234642	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional.	0
NZ_CP054692.1\|WP_081718616.1\|268641_270186_+\|LTA-synthase-family-protein	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	2.11548e-46
NZ_CP054692.1\|WP_024751870.1\|283594_284599_+\|tRNA-pseudouridine(55)-synthase-TruB	gnl\|CDD\|211339	cd02573, PseudoU_synth_EcTruB, Pseudouridine synthase, Escherichia coli TruB like. This group consists of bacterial pseudouridine synthases similar to E. coli TruB and Mycobacterium tuberculosis TruB. Pseudouridine synthases catalyze the isomerization of specific uridines in an RNA molecule to pseudouridines (5-ribosyluracil, psi). E. coli TruB and M. tuberculosis TruB make psi55 in the T loop of tRNAs. Psi55 is nearly universally conserved. E. coli TruB is not inhibited by RNA containing 5-fluorouridine.	1.58662e-88
NZ_CP054692.1\|WP_044634930.1\|285795_287898_+\|polyribonucleotide-nucleotidyltransferase	gnl\|CDD\|236995	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional.	0
NZ_CP054692.1\|WP_002700161.1\|283230_283608_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	9.50096e-35
NZ_CP054692.1\|WP_174896917.1\|273785_274634_-\|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ	gnl\|CDD\|225509	COG2961, ComJ, Protein involved in catabolism of external DNA [General function prediction only].	1.09899e-79
NZ_CP054692.1\|WP_024751868.1\|280175_282866_+\|translation-initiation-factor-IF-2	gnl\|CDD\|235401	PRK05306, infB, translation initiation factor IF-2; Validated.	0
NZ_CP054692.1\|WP_024751874.1\|288350_289484_+\|YjgP/YjgQ-family-permease	gnl\|CDD\|367632	pfam03739, YjgP_YjgQ, Predicted permease YjgP/YjgQ family. Members of this family are predicted integral membrane proteins of unknown function. They are about 350 amino acids long and contain about 6 transmembrane regions. They are predicted to be permeases although there is no verification of this.	5.19426e-57
NZ_CP054692.1\|WP_002700173.1\|274639_276184_-\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|379311	pfam13646, HEAT_2, HEAT repeats. This family includes multiple HEAT repeats.	7.64001e-09
NZ_CP054692.1\|WP_024751862.1\|272963_273281_+\|DUF4325-domain-containing-protein	gnl\|CDD\|379507	pfam14213, DUF4325, STAS-like domain of unknown function (DUF4325). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea, eukaryotes and viruses. Proteins in this family are typically between 99 and 341 amino acids in length. This domain is distantly related to the STAS domain.	1.34508e-07
NZ_CP054692.1\|WP_024751871.1\|284605_285436_+\|FAD-synthetase-family-protein	gnl\|CDD\|185679	cd02064, FAD_synthetase_N, FAD synthetase, N-terminal domain of the bifunctional enzyme. FAD synthetase_N. N-terminal domain of the bifunctional riboflavin biosynthesis protein riboflavin kinase/FAD synthetase. These enzymes have both ATP:riboflavin 5'-phosphotransferase and ATP:FMN-adenylyltransferase activities. The N-terminal domain is believed to play a role in the adenylylation reaction of FAD synthetases. The C-terminal domain is thought to have kinase activity. FAD synthetase is present among all kingdoms of life. However, the bifunctional enzyme is not found in mammals, which use separate enzymes for FMN and FAD formation.	1.96895e-45
NZ_CP054692.1\|WP_024751867.1\|278701_280168_+\|transcription-termination/antitermination-protein-NusA	gnl\|CDD\|236410	PRK09202, nusA, transcription elongation factor NusA; Validated.	2.72e-153

>NZ_CP054692.1|WP_024751866.1|276193_277324_-|tRNA-guanosine(34)-transglycosylase-Tgt
MKIRKIFTECHKDAHTAARTGVIALPHGDLRTPAFMPVGTAGTVKGMTKDDLEEIGFEIILANTYHLFLRPGVEVIKAAGGLHGFTQWKRNFLTDSGGFQVFSLANLRRLSDEGVSFQSHLDGSSFFLSPELVVQLQTGFNSDIQMQLDICSNYGISKEQTEKELGLTSAWVKRAFSEWLKTPAEYQGSLFPIIQGGFYKDLRLRSIETVCELNPNGLAIGGLSVGEPTELYAEMLAFTAEHLPKNKPVYIMGIGTPHYILEAVKNGIDLFDCVLPSRNARNGSLFTRKGPISIKKKEFEYDFNPIDSQCNCKVCRTYSRAYLRHLFRSKEILYSMLGTYHNLAFLYTMVQEIRQAIEEDRFAEYYKNFLAEYTGG
>NZ_CP054692.1|WP_002700173.1|274639_276184_-|HEAT-repeat-domain-containing-protein
MKKIFCVFCMVFFTLFFVAAEEKTAGSKSNSVQTDTADTTDTELDLESEDAAEASAEEQIEEDPETKKQLDTIRYGLEGEVLTLIEELKKNEDTTLNAALQELFAKTKSTAVRDALFDLFSAQKNDSIKDFALEVLKDPVEYKPSTVRNSIKYLVAIEEKEAAPLVRELMKDNSEYADDCISAFGKIGSADDALFLIDYFKNELDDDQKTTLIKRQNLMVALEQLHLPETAAFLEEVARDSGENAVIRGSAAIGLAQIGDDATVSILSDLYEDSDPILRIAAVKGLGFFTTTEAEEILLQGFKDSYYKVRMQSLEAAAEKKPIAAFPYILHRAKTDPVDAVKYAAIKSVGAYNTEEGNLWLKETFLDKSKSNTLRVKAAEALMNNNLDFFYADLEQIMIEVAEDETKKKLRYELGKIFAKVQTELGDSIALAYLTSKDAQTIALGLDMFKQNRYAQSAVRVSEIAEDSNFGSLQRRAKTILADFEQQETPAEEKTEALPEPEDEASPDSDTDSQ
>NZ_CP054692.1|WP_174896917.1|273785_274634_-|23S-rRNA-(adenine(2030)-N(6))-methyltransferase-RlmJ
MLSYRHGFHAGNRADVFKHSVLVAFLKLYTKKQKPFAAFDIHAGGGVYQLTSEHALQTGEAAEGIIPLVSAFEKKLLPQPIPESLEAYLNLSLRYYRKDCSYAGSPEIIKNFLRQDDELILCDLHPAEGAALRALYKNEKRIHVHIRNGYEAVCALTPPKSGRGFVLIDPSYEVDSDYENVITTVQKLHKRWRAASFIIWYPILKRREYETAELKKALSALKGSESFYVENPVRPDFLRPVTPPPAPPAGEYGLQGSGMFVINPPWGMQEAATTIAEWLRKV
>NZ_CP054692.1|WP_002700175.1|273277_273718_+|hypothetical-protein
MTIFLSLVSGLVGAMVGAGIQIFYNNKIEKQRLLHDYKKICFAEWLHLNEELLILLREPQKENNTVFRQAIKQKTELLSFIAAVSKKHEKAVSKLKKHIVDIDERISLSDFAEEAVNIGKVQGNKTKLIREVSTLITEVLDKLAKL
>NZ_CP054692.1|WP_024751862.1|272963_273281_+|DUF4325-domain-containing-protein
METLKIAECGNGYQYQGPRFDDLGPDSGEEFRDEYLIPWLKNNNNASELCVDFEGTVLFTPSFLEESFGGAIRKGFEIVRKIQFKNIPPDVKQQLAKYINKAKKQ
>NZ_CP054692.1|WP_148878694.1|272079_272949_+|hypothetical-protein
MERKEEEIFFILFQAEKINTPTLDFSKVKYIDIGSAIYIKAFVEFLRENNREPKISCSPKNQKMRQILQHLGIFDYQLKITYNDIRCWAVRKWHKDFKKYPGVNFGKVLYKEILPEVLKDKIPSTEFSRIASSLSELLSNCTEHAYTKQDVFTNFYLIAGEYENDIKKSNTFSFCILDYGQGFKASLKKNTLFESVINKFKEDADSNLLKEAAKGNFNADKAKNSGRGTGLPAVTESVKLIKGSLYLYSDNGSYKVKKETEEVRDRRYPVRGSIIEVILPINDEGNDDI
>NZ_CP054692.1|WP_024751860.1|270857_271844_+|radical-SAM-protein
MSDFFSAYDSCAVCPRRCGVNRNAGQRGFCGETSELRIAWAGLHFGEEPPVTGTGGSGTVFISGCNLGCPFCQNFQISQQGMGRAVSAEAFADICFALQNAGAENINIVTGSHAVPGIAAGLLRAKERGLDIPVVWNSSGYESTDALDMLDGLVDGWLPDLKTLNTDIARAVFKAADYPSTAKKAIKKMVRISPLVLDGSNQKRYPAGKLMSGVIVRHLALPGRIADTALVLSWFAKTMKDSALLSLMTQYTPVEANPRTKDMQTFENRLLTSSEDSALRNLLSELEIDNGFYQELIEDPDWLPDFTRIQTFSSKLSKPIWHWREGWV
>NZ_CP054692.1|WP_024751859.1|270483_270861_+|hypothetical-protein
MNIIDKFYSDAKRRAAAVEFSEGRKIIADLFCKTVAVYDKQAVQLAEDFADYRLGAEISAIDEDIEWFYKIFSLIDGSFDDSMNFSEEDWEAITVIIDAAADDLDMDLLNSLMAVIVDRKKIRGR
>NZ_CP054692.1|WP_081718616.1|268641_270186_+|LTA-synthase-family-protein
MEGSSLMKSELENFKRIKNLIPASLFIFLYAALFASIIWVHSTFPNISIDEIIFTLKTPQGDADKTILLTVFIFLIIFPLLLAVSYFLISFFLSPVIIKRKHKKNIQFIPFPIRFTVKKNIFFFGCFLFLLLVFLQYKTCIINYVFYQLQGETDLYENYYTDPKTVTYSFPEKKKNLIFIYLESIEITATAKKYGGLLPYDTIPELRKIAEEHLSFSNSEKLGGFTQVLGATHTIASMVCSNLGVPLGLDPLGSRKNLRKNFCKGGYGLGDILADNGYKNIFITGASATFGYKNLLLKNHKDFEIKDYPYYIATGKLPQKYKVRWGFEDAKLFEFAKEELSNISDKGPFFLQVFTTDSHTPGGYLPSQYKREFKTKIQDVYRNASKMTGDFVAWLKTQNFYDNTVIVILGDHQYMGGGLYPFGTRKDERHAYNAIINSQATTAADKNRTFAAFDFCPTILEAMGIQFNAEKLGLGRSLFSGKKTLLEEIGTDQFNAEAQHRSSFLAEIIEPRFK
>NZ_CP054692.1|WP_024751857.1|267108_268635_+|LTA-synthase-family-protein
MFTIKKNIKRQYSSLFFTSIVVLFVSFLIIGMLWVKKTYSNLNIEQLIFFRSVPTAGAPSDFVILSYIKVFVIPFCITVFYFFSALFFKQALFINLKKKQIQIFPFFIKPRPRNIFLFITVWLLVFLGFWQCKIKFFTYVYYQYQPETDLYSKYYVDPSKVEFTFLAKKKNLIFLYLESVEASITAKEYGGLLPYDTIPELRKIAEENLSFSHGEKLGGATQVLGTSHSLASLVNTSLGVPEMLPPFFSENLKSHFFTGGYGLGDILFDNGYTNIFISSSCPQYGYQDVFVKNHKNFSIFDLNHYRSIGKLDKDYQVWWGFEDSKLFQFAKEELAELSEKEEPFFLMLFTGNTHTPKGYLEKDAEKKFKNQIHNVFADSSKQVGEFIQWLKKQSFYEDSVIVILGDHQYMGDDLYSKNIKEKDRHTYNAIINSQVHTVQTKNRVFATFDFYPTIVEALGIRFHAKGLGLGRSLFSGEKTLLEEIGVNKFNEEIQRRSSFYQNHIIQKK
>NZ_CP054692.1|WP_002700166.1|278241_278691_+|ribosome-maturation-factor-RimP
MTYVKKTDIPYFTDCESLVNGLGYRLVNLSAVKQKAGWQIQAVVYSEKGVGIDDCSKVHRALLPRLEALLNSQDVSLQVSSPGINRNIKSTIEFAAFIGEAIAVWSAEISDWREGTLADTTEEAITIETKEGMAAISYADIKKAKLNKM
>NZ_CP054692.1|WP_024751867.1|278701_280168_+|transcription-termination/antitermination-protein-NusA
MFGVSNNDIRRFAQEKEMDEDLAFKIVEQTLKAAYKTTFKTDENAVVTFGDNHVSIYSRKKVVDEVDDDVTEIDLEDAKKLTENAELGDELLVELDPENFKRGSVQAAVQRIHQLSRELQKDSLYAEYKSKEGEIIIGYFQRMREGSIYVDLGKVEGVLPRKYQIPGEEFHQNDRIKALIREVKKHQSNLVQLILSRTDADFVRGLLSSEIPEIYDGIVEIHKIVREPGYRTKVAVFTRREDIDPVGACVGQRGARIQTIIKELDDEKIDVVEYSDDPAEFIRNALSPAEVLNVIILDEEKRSALAVVSDSQLSIAIGKQGLNVRLANRLADWSIDVKTEKQFAEMEVVTDSRKAVEELFSDDEEVAEYDIQEELPNLDPAIITILHQNGIKEIETLVNLSENEVRALEGMTSEYVEELFKEINENFEIVQEERIDEPEQTNTEEQLPEYEEQSFECPECGARITTDMTECPNCGIGLSFEYEDEDEE
>NZ_CP054692.1|WP_024751868.1|280175_282866_+|translation-initiation-factor-IF-2
MAEKNESLQPDVILKKNRTDVPSGELKTASAEEKPKKRLVRKKVLPKQKEEGVKVKKVVTVTATAKKSSEEKEESKKISQPEVVETVQSTAPVPSPEEKKQPKSSEKKKEEKPAPTEPEKKVVKTASSKEKAPSEGGQKKQKVPGLRVLDITAERPNRKAGNLAGQGGNAGTRKERYGGRQDNFTGAQARENAGMRTSYGRGKFAGKDGNRQNAGQGGARQGGGFGQRQNKQGFRPQGGFAGRPPAAPMPMETNKTSQGKKTFKGKKQIYQRKEEELDFFEEKLLQQKKKSKEKTSSVPKQIEIMESISVADLAKKMNLKASELIGKLMGMGMMVTMNQSIDSDTATILASEYNCDVKLVSLYDETLIESNDDEGGEMRSRPPIVTIMGHVDHGKTKTLDAIRRTHVSEGEFGGITQHIGAYTVSTPKGNITFLDTPGHEAFTMMRARGAEITDIVVLIVAADDGVMPQTIEALNHAKDAKVPIIVAINKIDKPEANPDKVMTRLSELGLMPEEWGGDTMYVKISALQRLGLDDLLDAILLQAEILELQANYSCRAEGKIIESQIDHGRGIVATVIVQRGILRTGDPYVAGIYSGRVRAIFNDRGEKIEEAIPSMPVEILGLEGMPNAGDPFQVTESEKIARQISSKRQELKRYEDSRNVKKVTLDNLYETIHDGEVLEFKVIIKGDVQGSVEALKQSLEKLSTKEIRLSVIHASAGAINDSDVMLAAADANAIIIGFNVRPTPQAKILAEQEKVDIRKYNVIYKAVEEIELAMEGLLRPDLKEEVIGLAEVRQVFKVPKIGNIAGSYILEGSVKRNSHVHVIREGIVLHSGKISSLRRIKDDVKEVSAGFECGIGIENYTDLKEGDQLEFIEVVEVARKLKDTEKYEPPKASTEE
>NZ_CP054692.1|WP_002700161.1|283230_283608_+|30S-ribosome-binding-factor-RbfA
MSEFRLTKLGEQIREEISKMISSGTIKDPRVSNFLSINRVDVSADLAYAKVYVSSFMDSHKTKQGVSGLENAAGFIRTTLAKKLHVHKFPQLSFIYDESIKEGFDMVKKLDSMDISPEEEQDEEN
>NZ_CP054692.1|WP_024751870.1|283594_284599_+|tRNA-pseudouridine(55)-synthase-TruB
MRKIEQDLIIPFAKQAGMTSFDSLWQVKHALKTKKLGHTGTLDSFADGLLVLLSGKLTRLAGRITDFDKTYITRMEFGKQTDTLDPEGEVIDMKELPQVEAFFSVLDSFTGVITQIPPLYSAVKIKGQRASDRMRQGEAVVLKERSITIYSLRVVSLESDGKTADPSAFASGALLSAATLEVSCSKGTYIRSLVRDIAAAAGSCAFVSALRRTAVGPFMLAEAAGYDKLVEFGKTESEVNQSRTQLLYEEIKAASKTLDTKTAKKLGFPVVEINRAFVKNFFHGQKIQKEWFNTVPASSGSRLIAVFSCDNCIGLIKNSGNSFNYDTVFQIEGM
>NZ_CP054692.1|WP_024751871.1|284605_285436_+|FAD-synthetase-family-protein
MEIFSWDALVKAKAPLITQGAAVSIGGFDGPHRGHVLLFEKVFEAAKKENLKAGLITFSRSPRFKKAGENYVGDVSTLRLRLQKFEELGFDFIVLIDFSCSFARIEGVQFFDILLKTIRIRYLAVGTDFRCGYRLDTGVPELIQLGSEQGFRFDSIGQLTAANNLRISSSAVRVAVEKADFTLAKDLLGYPFLLDIKDVFTPDEQKVCSYKAVKQITQILPPDGRYSVKVFLTYKTTVVALLTIHEGSIVLTFDSIQKNIPAEEKDFDTVEFIQKE
>NZ_CP054692.1|WP_002700155.1|285439_285709_+|30S-ribosomal-protein-S15
MALTKEHTASVVAKHGSNEKDTGHAHVQIALLTERIKQLTEHCKTHPKDKSSNRGLLVLVGQRRRLLKYLQRTNLEGYRALIKELGLRK
>NZ_CP054692.1|WP_044634930.1|285795_287898_+|polyribonucleotide-nucleotidyltransferase
MKHTVSYKIGDSELILETGRLAKQANGAIFAQFGGSAVLATVCASDQSQEGLDYVPLTVDYNEKYYAAGKIPGGFIKREGRPKDKEILVSRLIDRPMRPLFEKDFGRDIQIIPTCVSSDMINPPDILAVIASSAAVVISDIPFNGPVAAARIAYVNGEYVINPTFKQIDRAEMEIVVAGTKEGITMVEGGAHEVSEEVMLTALEKAHEFIKIICDLQEQLRNACGKEKLPLVPLSVELENKQAIHDEAYPRLSEALYVKGKFERRAACDAVKADIAEKYAEQLEDEVQTKLFNALFDDMEYHILRENILDKGLRVDGRNTEEIRPITCEIGVLPRPHGSAVFTRGETQSLAVVTLGTVFDEQVYDDIEGDRRENFILHYNFPPFSVGEVGRMGTGRREIGHGYLAHRSLSPMIPSREKFPYTVRVVSEILESNGSSSMATVCGGTLSLLHAGVPMKSPVAGIAMGLITDGDRYAILSDILGEEDHLGDMDFKVAGTENGITGFQMDIKIAGVSSEIMKNALAQAKRGRMHILGIMNQTISKPNADISKYAPRIECVKIAVDKIGALIGPGGKNIKALSEQYQVTINTDNDGTVTIYGKDSQSALDAKAAVIGVVEEPEVGRIYQGTVKKIMEFGAFVEILPGKEGLCHISKLSRERVGKVGDVLKEEQRIPVKLLEIDKMNRLNLSYIDALEELEKKAEK
>NZ_CP054692.1|WP_024751873.1|287897_288338_+|dUTP-diphosphatase
MQTVFCTLKEDASLPVYQTAGAAGADIRAYLPDGNIVLQPMERKLIPTGLAVELPANTELQIRPRSGLAFKNSVTVLNTPGTVDSDFRGELCVLLINLGEEPFTVTHGDRIAQAVISPVIQAEFKQVDELSRTNRGANGYGSTGIA
>NZ_CP054692.1|WP_024751874.1|288350_289484_+|YjgP/YjgQ-family-permease
MSKRSSKIYHKKILFLYLSKELLLYFFVCFLFFFFIFFVNNILLMAEDILSKHAPFKDVMLLMFYSLPMIIANSAPFAALVGTLMCIGRFFSDLEFLAMNALGVSMKFLLVPVLAVGLFISIVSFFTNDVLLPASFIQLRKVYWDISTSTPALELESYSIKKNQNAVVISGLIKDGIIDELLIIDKGENKESRILGGKKSELKKSTDPAVIMTLDMNEPQMLIIDGKDEKKYDSIVGKKIAYNVLAKNINPVYFNALGPSDMTSYDLYKDIQTRKKNNEDKRLLNIYNMEFHKKFSIPFGALFFVFLAFGISSVGKVHNQSVGFILGLLIAVAYWAVLMGGQEISLTFDVSGAFMMWLPNILLLIVGGILLGRRLFR

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Crispr_ID: NZ_CP054692_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_3

676866-676966

Orphan

Consensus_repeat	Method
CTAACATTCGCTTAACCTGCATTTGCG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_3

>merge|NZ_CP054692|3|676866-676966|CRISPRCasFinder
CTAACATTCGCTTAACCTGCATTTGCGCCTCCGCCGCAATATATTTTACTTCCCCGCCGCAAGGCGGCGTCAACCTAACATTCGCTTGACCTGCATTTGCG

>NZ_CP054692|3|3|676866-676966|CRISPRCasFinder
CTAACATTCGCTTAACCTGCATTTGCG	CCTCCGCCGCAATATATTTTACTTCCCCGCCGCAAGGCGGCGTCAAC
CTAACATTCGCTTGACCTGCATTTGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024752155.1\|684853_686002_-\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP054692.1\|WP_174896957.1\|661406_663527_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_024752156.1\|686683_690835_+\|TIGR02680-family-protein	unknown	unknown	gnl\|CDD\|274256
NZ_CP054692.1\|WP_002699611.1\|693149_693368_-\|cation-transporter	unknown	unknown	gnl\|CDD\|225127
NZ_CP054692.1\|WP_174896961.1\|678884_680183_-\|integron-integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP054692.1\|WP_174897287.1\|667152_668685_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_082048250.1\|682516_683680_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP054692.1\|WP_174896959.1\|665604_666207_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752137.1\|677022_677919_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_CP054692.1\|WP_174897289.1\|673721_675527_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_024752157.1\|691057_692944_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319847
NZ_CP054692.1\|WP_174896962.1\|683680_684634_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP054692.1\|WP_174897288.1\|669012_670977_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_174897290.1\|680470_682114_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_024752139.1\|672382_673528_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP054692.1\|WP_174896958.1\|664867_665473_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367483
NZ_CP054692.1\|WP_039943402.1\|677911_678778_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174896960.1\|675952_676681_-\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP054692.1\|WP_024751685.1\|664040_664874_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751688.1\|666191_666773_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024752155.1\|684853_686002_-\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.65514e-45
NZ_CP054692.1\|WP_174896957.1\|661406_663527_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	2.63828e-55
NZ_CP054692.1\|WP_024752156.1\|686683_690835_+\|TIGR02680-family-protein	gnl\|CDD\|274256	TIGR02680, conserved_hypothetical_protein, TIGR02680 family protein. Members of this protein family belong to a conserved gene four-gene neighborhood found sporadically in a phylogenetically broad range of bacteria: Nocardia farcinica, Symbiobacterium thermophilum, and Streptomyces avermitilis (Actinobacteria), Geobacillus kaustophilus (Firmicutes), Azoarcus sp. EbN1 and Ralstonia solanacearum (Betaproteobacteria). Proteins in this family average over 1400 amino acids in length. [Hypothetical proteins, Conserved].	0
NZ_CP054692.1\|WP_174896961.1\|678884_680183_-\|integron-integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	0
NZ_CP054692.1\|WP_174897287.1\|667152_668685_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	7.81866e-53
NZ_CP054692.1\|WP_024752137.1\|677022_677919_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	4.39253e-47
NZ_CP054692.1\|WP_174896960.1\|675952_676681_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	8.77554e-23
NZ_CP054692.1\|WP_024752157.1\|691057_692944_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319847	cd07548, P-type_ATPase-Cd_Zn_Co_like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis CadA which appears to transport cadmium, zinc and cobalt but not copper out of the cell. Bacillus subtilis CadA/YvgW appears to transport cadmium, zinc and cobalt but not copper, out of the cell. Functions in metal ion resistance and cellular metal ion homeostasis. CadA/YvgW is also important for sporulation in B. subtilis, the significant specific expression of the cadA/yvgW gene during the late stage of sporulation, is controlled by forespore-specific sigma factor, sigma G, and mother cell-specific sigma factor, sigma E. This subfamily also includes Helicobacter pylori CadA an essential resistance pump with ion specificity towards Cd(2+), Zn(2+) and Co(2+), and Zn-transporting ATPase, ZiaA(N) in Synechocystis PCC 6803. Transcription of ziaA is induced by Zn under the control of the Zn responsive repressor ZiaR. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP054692.1\|WP_174897289.1\|673721_675527_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.636e-56
NZ_CP054692.1\|WP_174896962.1\|683680_684634_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	8.14921e-30
NZ_CP054692.1\|WP_174897288.1\|669012_670977_-\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	4.88081e-54
NZ_CP054692.1\|WP_174897290.1\|680470_682114_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	8.25686e-54
NZ_CP054692.1\|WP_024752139.1\|672382_673528_-\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	2.48579e-30
NZ_CP054692.1\|WP_174896958.1\|664867_665473_-\|hypothetical-protein	gnl\|CDD\|367483	pfam03412, Peptidase_C39, Peptidase C39 family. Lantibiotic and non-lantibiotic bacteriocins are synthesized as precursor peptides containing N-terminal extensions (leader peptides) which are cleaved off during maturation. Most non-lantibiotics and also some lantibiotics have leader peptides of the so-called double-glycine type. These leader peptides share consensus sequences and also a common processing site with two conserved glycine residues in positions -1 and -2. The double- glycine-type leader peptides are unrelated to the N-terminal signal sequences which direct proteins across the cytoplasmic membrane via the sec pathway. Their processing sites are also different from typical signal peptidase cleavage sites, suggesting that a different processing enzyme is involved. Peptide bacteriocins are exported across the cytoplasmic membrane by a dedicated ATP-binding cassette (ABC) transporter. The ABC transporter is the maturation protease and its proteolytic domain resides in the N-terminal part of the protein. This peptidase domain is found in a wide range of ABC transporters, however the presumed catalytic cysteine and histidine are not conserved in all members of this family.	3.63434e-18
NZ_CP054692.1\|WP_002699611.1\|693149_693368_-\|cation-transporter	gnl\|CDD\|225127	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	1.98437e-08
NZ_CP054692.1\|WP_082048250.1\|682516_683680_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	4.00456e-15

>NZ_CP054692.1|WP_174896960.1|675952_676681_-|leucine-rich-repeat-domain-containing-protein
MGTKLTELKFEAGSKITKLPKNMCEICTDLTTVELPTGLQSIGSSAFSGCEKLSQITFPDTVHTIETNAFRETALTRVVLPANLQKLEQQAFYLNKELTEVVASTTVVQQDWKEIPENDNGISALCFCDNQKLQTIKFPDRLKTMSEGCLLGAVHLKDVTLPASIASISEGIIDLSSITDKVTVHVKNREPSQISINTYAFRNFDGTHKDKLFIHVPNGTSETFKKAAGWSTYQERISEESN
>NZ_CP054692.1|WP_174897289.1|673721_675527_-|methyl-accepting-chemotaxis-protein
MLNFLIFNGLFGFGFLYAWYTKIIPVEELAKFLTAFPTLVVLVFNVTIPTVLYRMFINMLKTYKTDVGGVDKANKVLALYSKLSLLAPIILTLATPIATLLWLGIHSIEKIIACVLGAVGCLDFASLFFYILWTHKLEAYLKFLPFEKKHITMSYILRNMLVSFFLFGGLIFLCIDPFIGMLYNGLTLIQTLKMIIPIAILTLSGALFINYTLYTGINNSINEVMNFTDTLAVGNFIVDKLEIKRRDVFGILAMQLNIFHKNTVALLSSIKNNTNTMNEVGTILSTNAEETASSIHQISENINGVKQQTMTQAAGVTETAATMEEIIRTIKQLNGSIETQAASVARSSSSIEEMVANIASITQTIDKTDDSIKELAQATGDGKDAVVTSNSVTQKIAEESGGLIEASNVIQNIASQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEESSTQGKNITVTLKTLGAEIETLAKSSKTVEEKFNAIFTLSEQVKTMSANLMTAMKEQENGSYEVLSAIKAINSVTQEVQAGSAEMLRGGEQVADEMRKLDDLTRVITDSMNEMASGAVQISNAVQEVNEITQRNKDSIDNLTTEVEKFKV
>NZ_CP054692.1|WP_024752139.1|672382_673528_-|leucine-rich-repeat-domain-containing-protein
MKQRLLLLLTAAMVCAVTIGCRLSAGTSAGYSKDKQDTQQSDTKSNQGQSQQGGGQGQQDERFEVQDGKLVKYTGTDEHVVIPESVKVIGKEVFSANKTIKTVQLPTGLLKIEDDAFFYSTLTKVTIPANVTEIGSFAFMGTKLTELKFEAGSKITKLPKNMCEICTDLTTVELPTGLQSIGSSAFSGCEKLSQITFPDTVHTIETNAFRETALTRVVLPANLQKLEQQAFYLNKELTEVVASTTVVQQDWKEIPENDNGISALCFCDNQKLQTIKFPDRLKTMSEGCLLGAVHLKDVTLPASIASISEGIIDLSSITDKVTVHVKNREPSQISINTYAFRNFDGTHKDKLFIHVPNGTSETFKKAAGWSTYQERISEERK
>NZ_CP054692.1|WP_174897288.1|669012_670977_-|HAMP-domain-containing-protein
MASTLARESAGIADKFKNETHYLEGLAQNLLITDTTIPFEKKIAFFKTEAKRNGYTYFSYSETDGNTIKFAENSKPASVAKKQGFIDAMKGNTNFRDVRLSGIAKTPVVSYMVPIYNIERTKVIAVFQGHLDASFLSQIAKNIKNKKTGKACIINKEGRIVGSADADDVAKEINLFESRDIPDEKRRLGEFLQPLVKENKTAFGSYSDGKRRMAAGFAAIEGTPWLLVYTVTQAELEQQLSVLTRLYIIGSVIILSIASAALALIIRIIVKQILKIVALLRDIAEGEGDLTVRLPVTGNDELTDLQLYFNKTIEKIGHLIKNVRSSSDKMSEIGSDLSSNMSETASSINQISANIDGVKQQVLEQSASVTETASTMEEIIRTIKQLNASIENQAASVAQSSSAVEQMVANIASITQTLDKTNDVIKTLATATADGKETITSTTSVTQKIAEESGSLLEASNVIQHIASQTNLLAMNAAIEAAHAGEAGKGFAVVADEIRKLAEESSAQGKTITATLKTLSGEIESLSVSSKTAGEKFNAIFSLSEQVKEMSNRLMEAMREQENGSREVLGAIKTINTVTTEVQAGSGEMLRGGEGVAEEMRKLDDLTRVIADSMNEMASGAVQISNAVQEVNEITRKNKESIDSLSAEVGKFKV
>NZ_CP054692.1|WP_174897287.1|667152_668685_-|methyl-accepting-chemotaxis-protein
MFINVLKTYKTDVGHSIEKIIACVLGAVGCLDFASLFFYILWTHKLEAYLKFLPFEKKHITMSYILRNMLVSFFLFGGLIFLCIDPFIGMLYNGLTLIQTLKMIIPIAILTLSGALFINYTLYTGINNSINEVMNFTDTLAVGNFIVDKLEIKRRDVFGILAMQLNIFHKNTVALLSSIKNNTNTMNEVGTILSTNAEETASSIHQISENINGVKQQTMTQAAGVTETAATMEEIIRTIKQLNGSIETQAASVARSSSSIEEMVANISSITQTIDKTDDSIKELAQATGDGKDAVVTSNSVTQKIAEESGGLIEASNVIQNIASQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEESSTQGKNITVTLKTLGAEIETLAKSSKTVEEKFNAIFTLSEQVKTMSANLMTAMKEQENGSYEVLSAIKAINSVTQEVQAGSAEMLRGGEQVADEMRKLDDLTRVITDSMNEMASGAVQISNAVQEVNEITQRNKDSIDNLTTEVEKFKV
>NZ_CP054692.1|WP_024751688.1|666191_666773_-|hypothetical-protein
MKKLFMFSVIILSFGMVYGAENILQEDIFTGFDAQELSIDDAEIISGGETYIGYTPIMKHYYHTLTVVTDKPISDPSFTVRAVFESGVNSEGNSSASWGIGYNVQQHYNKPYMIKKNPGYYELQPVSRPAGMSVKDYDDKVIETAKAYFQEKPKLYLVLHRNCNTTTSTIIRRSGGYVVPSKAMWRVPGWKKW
>NZ_CP054692.1|WP_174896959.1|665604_666207_-|hypothetical-protein
MEKMVRTQKMAKFFNKTIIVVFTVLCVLTFSACRLQYTVKNARFKSEFLWVYAEQDFNIKKAGTIQGTFKLPKDVKYKGLNFEVMFPAIFRKNWDSVVKMPCKLTLSWNGGSLVKEDLEAKSNWHGINLWFHENEISHVPVKQEITYTLEYGVGVYTELNYYSRGEKVDKLADLEAHPESYSGFYDAVFVVAEQSTKKMP
>NZ_CP054692.1|WP_174896958.1|664867_665473_-|hypothetical-protein
MFFACVYGLIFSSWIFSFTPDIQGVQSLEKLRFSFVHEQGEDESCGLSVVSSILNLYLNLAVTEADLLSQLAEELQTTRKVTMAQMMQMFQAYGYQTKAYKIDMDNLIKAVQYYAPVIVHYDKPELHFAFILQADKDYVIAADPVLGLEMQTTKDFQKKWSKTVLLVKIPEQILNKSVLEKAIANTIQKYTVLDRIAERKW
>NZ_CP054692.1|WP_024751685.1|664040_664874_-|hypothetical-protein
MVKKIFFLLFLCITMVSLWAEDAEHNRIGIEKRQDFKMEMELSNRMKFQFISGYNIYDFLPQIGFNFIIFDDYLFSINQSISVRMKESAPMFKEKNFAIKAAFNDTVLGFTWQPSYQRWRFKLGLVSTLPTVPWVPKNADSFVTGSGRFGEEVFFAVNYITDPVVIGGRVSYTFVSPVIKNKESGWIPCILTSAVNVTAVLNHHISLSCIAAISWDSGPLQSSHYISGQSSLMESVKFNASWTENKWSISGELEFLHSSGVVLPIWGLSFTRELYGK
>NZ_CP054692.1|WP_174896957.1|661406_663527_-|methyl-accepting-chemotaxis-protein
MFPPPEVNKKKGKHFSIKKKLILILGVVTIAGYVTEGVMVMYFAKKAVKEKVFAMIKEKAIDTALVMDERIRSSWKTLEALARLEVLRADVPYEQKTESLEKELTFNPEFETLSSCDKSGTVYLAGGRKFDISDRQGYKLALSGGKSVSEPEYSKATNKLAVFFNVPVYDDDKNILGVLRAREDGTGLSQMIKDIVVGETGGCYIVGKTGNTIADQDIEIVKRQENSAKEAQTNPDLRDMALLEKKALEGSVAGCEYFNEDGKTYICGYTVMETTGWAVMVYAPVEEFMGTVQVLRNSVYILGGIILASILIVVYASAHRIVKPIINTVGILKNIAQGDGDLTVRLPVLGNDEISEMSEYFNQTIEKIGISIKAVDRSTQVMSGIGNELATNMSETASAVHQISANLDGVKQQAMTQAASVTETAATIEEIIRTIKNLNGSIETQAASVSQSSASVEEMVANIASITQTLDKTNDVIKTLATATADGKETITSATSVTQKIAEESGSLLEASNVIQHIASQTNLLAMNAAIEAAHAGEAGKGFAVVADEIRKLAEESSAQGKTITATLKTLSGEIESLSVSSKTAGEKFNAIFSLSEQVKEMSNRLMEAMREQENGSKEVLSAIKNINEVTVEVKAGSEEMLKGGVGVADEMSKLDDLTRTITDSMNEMASGAVQINNAVQEVNEITRKNKESIDSLSAEVGKFKV
>NZ_CP054692.1|WP_024752137.1|677022_677919_-|site-specific-DNA-methyltransferase
MSKSGTETSSFGVSGRINHDSSKFYDSKLYKELEKKEQIISDIENPFPKELLDSIILGSCQNMNKIPDNSLHLMITSPPYNVSKEYDDDLSLEEYLKLLENAFSETYRVLVNGGRACINIANLGRKPYIPLSDYISKMMIDIGFNMRGEIIWNKAASASPSTAWGSWQSASNPTLRDVHEYILVFSKGDYKRPRLQKENTIQREEFMEWTKSIWTMNAESAKRVGHPAPFPIELPYRLIQLYSFKNDIVLDPFMGSGTTAIGALKSQRHYIGYEINNDYINLANERIYPYKVDSQLFA
>NZ_CP054692.1|WP_039943402.1|677911_678778_-|hypothetical-protein
MLWNEEVEKHFFREALKSFASPEQLFYNLQSGYYAYIPKDFDSEGQTLQSRNSLIGQFTEKWCKQIFSPIAEELGLYAINGVVCEEIALTKSSSADLAFCTKNTITQKAEDIKLIFEVKMSIVSNYKFEQPDTVNLIGDYKSHKGNPSLLRSDSMLKAIGKSINIRVSGSNANTIPIIILGNSPITSTYSKKVDFLKSAGVIQGFYSLNPNPTKSDFIFESPEKGFITITDVNELKNLCKQILSEERHYFSSMISKKQLGNIITIAAKEIDDVKKGEKFLKLLRGCNE
>NZ_CP054692.1|WP_174896961.1|678884_680183_-|integron-integrase
MFVEIKPYENKALSVNFKAQGENFSKVLQAIKKVPGRTWLPDKQVWIIPADRNSCDILLNNLYYNGICMADSGFAAKNHAAYDFAPVNTETAAESNKPASLRLRDILSKLDEVIAAKHYSKRTREAYSHWISRFIRENKGKNLKALSDAEINSFVSRLAVKEKAAASSQNQALAALLFLYKNILGLTINTPENIVRAKKSKKLPAVMSREETAKIFSLLPDNDYSLCIRLLYGTGMRLMEALRLRVQDIDFDKNEIAIHNGKGAKDRKTMLPVSLKFPLQKHLENVRRIHEADCKDGFGSVPLPFSLAKKYPNAGKTWAWQWVFPQARRWRNSETGEQGRHHIDPSVIQRTLHEAVLRSGIPKPIGCHTFRHSFATHLLEAGYDIRTIQELLGHSDVKTTMVYTHVLNRGSLGVQSPIDRMSLRNVNATFAG
>NZ_CP054692.1|WP_174897290.1|680470_682114_-|methyl-accepting-chemotaxis-protein
MFINMLKTYKTDVGGVDKANKVLALYSKLSLLAPIILTLATPIATLLWLGIHSIEKIIACVLGAIGCLNFVSLFFYILWTHKLEAYLKFLPFEKKHITMSYILRNMLVSFFLFGGLIFLCIDPFIGMLYNGLTLIQTLKMIIPIAILTLSGALFINYTLYTGINNSINEVMNFTDTLAVGNFIVDKLEIKRRDVFGILAMQLNIFHKNTVALLSSIKNNTNTMNEVGTILSTNAEETASSIHQISENINGVKQQTMTQAAGVTETAATMEEIIRTIKQLNGSIETQAASVARSSSSIEEMVANISSITQTIDKTDDSIKELAQATGDGKDAVVTSNSVTQKIAEESGGLIEASNVIQNIASQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEESSTQGKNITVTLKTLGAEIETLAKSSKTVEEKFNAIFTLSEQVKTMSANLMTAMKEQENGSYEVLSAIKAINSVTQEVQAGSAEMLRGGEQVADEMRKLDDLTRIITDSMNEMASGAVQISNAVQEVNEITQRNKDSIDNLTTEVEKFKV
>NZ_CP054692.1|WP_082048250.1|682516_683680_+|IS4-family-transposase
MLHLTDQLGFKKISAEEQADKRYRHFSARTQLFTMVFAQLTKQNSLRSIEHAISSDNDLYHAGITAKITRTNLAHANEYRPSIIFEKFYFHVLKYYTKLVNKPVNIFGKHTKLIDATTISLNIKQYKWAKFRSTKSGIKIHTRFDYEANCADYLFITNAKEHENNTLKNMHLTKQDIAVFDRGYFNKKQFYEFTKSEISFVTRLKSNVIYTVVDRYAVSGHENDTYKIISDEKITLNVSISKKKESVVTLRKIISKDLQSKKKIVLLTNLFEIDSLEVAELYKKRWTIELFFKMIKQNLKIKKFYGHSENAVKTQIWIAVITHMLFLILQAETNYRQRSFSYFCSEISVVLFLHRSLKKWFCGDHEKPVPKLIHHPNTSELSQKPPS
>NZ_CP054692.1|WP_174896962.1|683680_684634_+|Fic-family-protein
MDSSDVNQKPFVLDKLVELSIIQSTESSNRIEGIYMSDTRIKDLVLKKVVPKNRDEEEILGYQDVLRTIHESFEYIDISSSIILQLHRDLYKFSQKSIGGRFKNTQNYISETKANGSNEILFTPLSPYETPAAIDEICKNYNQAIDDNTINPLILIPTFIHDFLCIHPFNDGNGRMSRLLTTLLLYKLGVFVGRYISLEEKIEKRKNIYYNVLEESGINWHENNENTEPFIKYILGIIIAAYRDFEDRVDIFSSKSSAYEKVQHAVKMKIGKFTKSDIMELCPSISSASIENSLTKLVEENILERHGKGRGTYYVKN
>NZ_CP054692.1|WP_024752155.1|684853_686002_-|Fic-family-protein
MKVETNRAGKLKRMPTDYECFIPNNLTNVEINIDAEMNLLLNKAYLLLGRLDGMAITLPDIDLFVSMYVQKEAVISSQIEGTQASLIDVLQKEQRNGKIKETEEIVNYIKAANYAFKRLQDLPLCMRLIRETHSILLSNVRGNEKTPGEFRKSQNWIGYAGCTLNTASFVPPSPEDMEGALSDLEKYINEDDSISEIIKAALIHYQFETIHPFLDGNGRMGRLLIVLFLKEIGLVEYPVLYLSYFFKKNRNRYYELLNNVRMKGEFENWIKFFISGICEVSENAISSIQKIVELKKKDMEKIRNVPNGNISNLLLVYDYLLKHPFVETEDIRLLLHSSKPTVAKLQEILTELTILALVEDKKRYKQYVYSSYVDILSEGTLL
>NZ_CP054692.1|WP_024752156.1|686683_690835_+|TIGR02680-family-protein
MDGKWHLNRAGLLNYWYFDEMYFNFADGKVLFRGANGSGKSVTTASLFPVLLDGNTAPNRLDPFGSTARKIEDYLLGEKEISNIEDRTGYLFAEYKRENSSQYITTGIGIRAKRGKSLDKWYFIILDGSRVGINFELQHSLGRGRYQPYSKKELENRLAGGGMITDKMKDYAEWVNEKIYGFNNTEIFKEMIKLLVEIRKPKLSKDFTPTVIYSILENSLPGLKDEALQPVSETLENIDQIKNQLEGANSDYEKLSLIMKKYEAYNRSFVEKLAHYAHKTGNTYVQLTKEDKALTDSIEKLTALISAKGDEQTEALQERKALEEALDRLKTHDVFKLQNEMLQEQSRTEELKQKEKNLQGQYTQSMNAYRDEQNKFDSLQKRIAESEEEKQLAFENLNAYSADTGFKDEHTRYTAEYQTKQNHMDLSLWKRSAKDYENDVRTIQSVLEKMQTLQADSDKLQIDIASMQKEIDKKTNEIQNWEQMFSEQIDILQIDIEKWCNGAGFEITDDVRNQMQGLVYNLYKKEFALVQNLAKASYEHYHEKMLTEKISLEQEVRFKETELAAVQKELHEWKNKKIPEPARDAFKEKERTSLKEAGLPFISFYEVVDFKEGLSQEEKNVLEGALLDAGILDALLSEKNLPVRESSVLLPSDSIIEENLEKYLVPVQNKYVSTEYIQKILHSISIKETFHGAGSLFAASAPGAATTVSIEGKYNLGILSGKVTEKHEAKYIGKEAQILFIQKKIAELEQTQADINAEIESRRTAIENIENDVAAQQEHLQNFPSDTALREIDASITEAEKERRDFNDKKAFYESEERKTREAIGEQRRRLLEYESKHHFTYTEKNINELIRKIGNYCLELDELKILMQNILSLTEQAENSQTHIRREQERMDDCRIELDETQGALAVGLRKIRLLEEELKLAGQDEIIRKVTETAGRKKYLDDELLPNLAAEIKDAEIKKARTEEKSKRIAAEKLFYEQLSSEWQKLFERELFRYDEKTDEDIPALIKQWAKNFDTAAPDKYIKYSDEIHAYINKSIQELGDYRPEINTLPAIDTQAAEALAETDEFKTAVEFLRSFSKRDLLTVTNIQNKRDDIFRVVKELKSYIEEQEQMIEEKDKDLFESLLLESTGKTIKNLINDAEKWAQKMNAILQRQNNYRGLKLFIEWKPKAAEDEQEVGTKELVELLRRPAKSLTEDDIQKVVHHFRSKIEKAKIDMEKDEQLNSLHDIIKQVLDYRKWFQFIIHYEKDNQTKRELSNHVFNKFSGGEKAISMYLPLFTAMYSRYEDASKNAPYVVVLDEAFAGVDEMNIAELFKAMEDLGFDYVLNSQSLWGDYPTVKNLVIHQLIRERGSDMVVSQEYRWNGTERTEVDAEIETEIAVDRE
>NZ_CP054692.1|WP_024752157.1|691057_692944_-|cadmium-translocating-P-type-ATPase
MSKKQKKMLIRIIVSTLMMTALHFAPLTGWLRFGFYLIPYLIIGYDILIKAGKGIKNRQVFNENFLMAIATIGAITLALYSKSGDYTEAIAVMLFYQVGEWFQSYAVGKSRRNISNLMDIRPDYANIEKDGKLEKVDPEEVGIGTVIIVQPGEKVPLDGIVMEGSSSLNTSALTGESMPRDIKVGDEIISGCINMTGVLKIKTSKEFGESTVSKILDLVEHASSRKSKSENFISKFARVYTPAVCIAALILAFIPPLTRILIMNLPAQWSVWIYRALTFLVISCPCALVISIPLSFFAGIGGASKAGILVKGSNYLETLSKTKIVVFDKTGTLTRGVFEVKGIHHNELENAKILEYAALVESSSSHPISKSLQRAYGKEIDRSRVSDITEISGNGIVAKVDGIEVAAGNNKLMEKLGIQYINCHSVGTIIHMAIGGEYAGHIVISDILKPTSKKAIAALKAEGIYKTIMLTGDARKVADQVGKDLGFDEVYSELLPAEKVNRVEALLKSKADNAMFAFVGDGINDAPVLSRADIGIAMGAMGSDAAIEAADVVLMDDDPIKISKAIKISRKCLRIVYQNIVFAIGIKLICLALGALGIANMWLAIFADVGVMIAAVLNAIRALFVKNL
>NZ_CP054692.1|WP_002699611.1|693149_693368_-|cation-transporter
MKKAYKIEVDCANCANLMEDAARKTPGVKDASVNFMTLKMNVEFEEGKDPSTVMQEVLKNCKKVEDDCEIFI

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP054692_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_4

1108192-1108277

Orphan

Consensus_repeat	Method
TAAGCGGCTTAACAAGTTTGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_4

>merge|NZ_CP054692|4|1108192-1108277|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAAGAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCGTAAGCGGCTTAACAAGTTTGCAA

>NZ_CP054692|4|4|1108192-1108277|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAA	GAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCG
TAAGCGGCTTAACAAGTTTGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002696692.1\|1110502_1111306_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897002.1\|1113482_1114121_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153
NZ_CP054692.1\|WP_002696987.1\|1105654_1106671_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|227668
NZ_CP054692.1\|WP_044634971.1\|1106686_1107967_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|213207
NZ_CP054692.1\|WP_002695065.1\|1097311_1098001_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897005.1\|1116503_1116752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_039943848.1\|1098662_1099763_-\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP054692.1\|WP_174897000.1\|1112307_1113351_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634969.1\|1104567_1104951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897003.1\|1114738_1115140_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002695067.1\|1098008_1098635_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP054692.1\|WP_002695074.1\|1101461_1102466_-\|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl\|CDD\|129820
NZ_CP054692.1\|WP_174897004.1\|1115497_1115713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634970.1\|1105083_1105470_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897006.1\|1116757_1117309_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226810
NZ_CP054692.1\|WP_024751741.1\|1109524_1110487_+\|recombinase-RecT	unknown	unknown	gnl\|CDD\|236628
NZ_CP054692.1\|WP_024753320.1\|1099787_1101401_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897001.1\|1113364_1113514_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148883995.1\|1115684_1116482_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002695076.1\|1102470_1103244_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|272852

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002695074.1\|1101461_1102466_-\|tRNA-dihydrouridine-synthase-DusB	gnl\|CDD\|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	5.88347e-130
NZ_CP054692.1\|WP_174897002.1\|1113482_1114121_+\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	5.54734e-17
NZ_CP054692.1\|WP_174897006.1\|1116757_1117309_+\|hypothetical-protein	gnl\|CDD\|226810	COG4373, COG4373, Mu-like prophage FluMu protein gp28 [General function prediction only].	0.000800234
NZ_CP054692.1\|WP_024751741.1\|1109524_1110487_+\|recombinase-RecT	gnl\|CDD\|236628	PRK09846, recT, recombination protein RecT.	1.9468e-74
NZ_CP054692.1\|WP_002696987.1\|1105654_1106671_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|227668	COG5377, COG5377, Phage-related protein, predicted endonuclease [DNA replication, recombination, and repair].	5.95391e-31
NZ_CP054692.1\|WP_044634971.1\|1106686_1107967_+\|AAA-family-ATPase	gnl\|CDD\|213207	cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50. The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.	9.92236e-06
NZ_CP054692.1\|WP_039943848.1\|1098662_1099763_-\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.10677e-64
NZ_CP054692.1\|WP_002695067.1\|1098008_1098635_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	1.78695e-23
NZ_CP054692.1\|WP_002695076.1\|1102470_1103244_-\|TatD-family-hydrolase	gnl\|CDD\|272852	TIGR00010, Uncharacterized_deoxyribonuclease_MG009, hydrolase, TatD family. PSI-BLAST, starting with a urease alpha subunit, finds a large superfamily of proteins, including a number of different enzymes that act as hydrolases at C-N bonds other than peptide bonds (EC 3.5.-.-), many uncharacterized proteins, and the members of this family. Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity. [Unknown function, Enzymes of unknown specificity].	2.22762e-109

>NZ_CP054692.1|WP_044634971.1|1106686_1107967_+|AAA-family-ATPase
MLLKNIEIRNVRKIKQAEIEFHGAGVQVIQGLNKSGKTTIAQSIALTLGGSKDFVPGMISVGEEQAEIIAYTDDELKIRTLIGEKVTQDVSRLDELTGRYAKVSGGVRAFLDSIRSGLEMPFAIKDWTDESIIELLKERTGTSEKIALIDEELKRLEEARTQTGRDKKRLGTPTPVPKVEHAKPIDELQAEKEKAQNFLSTLKNAFSNINQEMHTLNIESESDIDAAIQRLELAKENLHKWLSKNHKQYSKEDIAEIDAAILEWNKNETAANAYDAYIAACDEIKKLEDEYNGLTKKIEAKRQERKDTLASMDLGVSGLEINEDNQLVHNGAIRGITKTNTIGNWSTAQSIQVFFSLGVRFSGEMKVMVVDNAESLDEAHTAIISEWAEKSGFLVIMLKVGDVPEELEEGIIYLKNGEVVANEYRI
>NZ_CP054692.1|WP_002696987.1|1105654_1106671_+|YqaJ-viral-recombinase-family-protein
MENLVKQLLGKDTNYVFTKSMAKDEWRNARRSSIGGSDAGAIMGLNKWASPLTVYLDKKGLHSFEGNMFTERGSWLEDPIRQRCREEFGVLIEEVPYMFYSGEQKFMSANIDGLIYVQEPKTISGIEVSGLGGHEIKTSQRGDGFGENEIPDSYFAQVQHYMSVLNLDWFVLSAYIIDKNELRHYAINRDEAFITRLVKAEKTFWEDFIEENIMPAPSGVDAEDEAIAKMFEGAENTIILDGEAESMSAEYLLINAQIKELEEKKSKLSSSLKLKIIEQQTNSEEKKAKAVAGKYNLSFSKSIRRTVDSEKLKKDGLYEQYLKESEVAMLRITEPKAK
>NZ_CP054692.1|WP_044634970.1|1105083_1105470_+|hypothetical-protein
MSEPITKVSETISFEDDCTFGNVETKLSNGWTVTQKFSWSFDSYYEPEIDYQCEDVGDLSIFDKNMEPYSNELTSEEEKALARLCIKDADELTDAVYQQTDWKSLAEEVREYNKNPYSYYGVTPLDFI
>NZ_CP054692.1|WP_044634969.1|1104567_1104951_+|hypothetical-protein
MNIEEIKKLSLNRRKTIAKSEKTPQNILLSLAASDPHRYVRGAVAENINVTADILEILLEDDDLYVRNKARERLGLFKLRLSEEREKTIEEKAEDIEDECDCLADFEARKKEQERWAKGAEICIPFK
>NZ_CP054692.1|WP_002695076.1|1102470_1103244_-|TatD-family-hydrolase
MQIFDTHAHIGLIHSDPIEQLRVVQEARRASVTRILSICNSLHDFAIVYETLQVSSSVYHAIGVSPSEVTAPGKDWIQTIEKGLSLPNVVAVGETGLDYCKKYGDKRSQIELFITQLDIASKAKVPVVIHNREAGKDVLDILAERIPDQGGIMHCYSEDAEYARLALDLPVYFSFAGNLTYRSARNLHETVLTLPLDRILVESESPFMPPAVYRNKRNKPANTVKTVEFMAELLDMDMEELAAQLWKNSCTIFNIPE
>NZ_CP054692.1|WP_002695074.1|1101461_1102466_-|tRNA-dihydrouridine-synthase-DusB
MYTKTLYRPVRIGKLQLKGNLFLAPAAGYSDVTFRSVAVEWGADFTYTEMVSSEAMVRDSQKTENLFKRAPNEQAYAVQIFGSNPNHMAETAKKILEKASPSCIDINAGCPMPKITKTGAGSALMRNPQNLYTVTKAVRDAVDTVNISVPVTVKIRSGWNTEHLTWKDAAQAAVDAGAAAITIHPRTASQCYGGKADWTILAQLAQMLHPQGISVFGSGDLFTPEDAKAMLEQTDCDAVMFARGAMGNPFIFKRTKELLLHGSYADISFERKLKTGWDELLILTQELGEERACKEMRKRFAAYTKGLEGGAELRKDFVKASTIEEYKSILSMAL
>NZ_CP054692.1|WP_024753320.1|1099787_1101401_-|hypothetical-protein
MKLISTIIESIRDFIEAIFFSSSPEYQVKRNLRLIMHEIRQIQPQVYRADKTLLPGFASGLFQLFGFIQPLKEILEKTIHSKDIRIATKSYDLLFDELLSPTENELQQSFAIKNRALEFEGLTGESFEKKLQDQSKTFKQFMQLFENEKYKQKNMQVKNLSVFSDFCNFDFITLFAAFDPQFLNINEKKLPITPRFREVKADTIVQQLLDFNYLFKNLIFDDALVYSLALLAKKNTKESIENIQSSISKNLTTIKNFFEKKLGVHTIANILKHIKNDPDFTDKTPDISVNYLEEYVQRQISQFNADSKKLLRIQQENKITDLVIKTFGTASLIPLEGYTDSINEALQATTTLSLDWVRPLEIIHTFTQNHFEIYCKPFLRELLIEGFFLDKQFQMRLSSSYYFCESINEKLSAFESLFKENGSCSVRIIQGYISELENGGDFEKALQKIINTANAQAKYLMQKIVTQYTELFNASIMILDDTKKILPEYISNIKALVTSQKNKDSYKSFEEEIECCRNFLEIMKNYAILGSIEPSAS
>NZ_CP054692.1|WP_039943848.1|1098662_1099763_-|GGDEF-domain-containing-protein
MDEKMNEQNKLMQYNEKFEPEDLSFEKVPQEKQIYDLKQLLEISKSLNSMMEFDRLVEAILYTSMAQMKTLGAALFTKKTFDSDGFILNRNYYGFETDPDRTYSIEKNHAILELLDEENYCLTPAQLKQLVPHDEILETLLALHPSLFIPFKAKNRLVGFLLLGEQINAGEDYTPYEKEFIMSIASLAAIAINNALLLERSTTDMMTHLKLKHYFYTVLNEKADTLPDDTPLSILMLDIDFFKKINDTYGHACGDLVLQQVAKIIQSCTRTGDMAARYGGEEFIVMLYNTNSKEAQKIAERIRTLIQDLSIQYNEFEVRVTISIGVATFLQKMESLKNLLERADIALYQSKENGRNRVSISAENLP
>NZ_CP054692.1|WP_002695067.1|1098008_1098635_-|rhomboid-family-intramembrane-serine-protease
MKFLRKPFKYVYWNAGFTLILINTIVFALTSLFKTLTPYLALIPLYVTHGHMYWQIFTYQFVHGGFWHLLFNMLGILFFGVTVEKQMGSKEFLLFYLLTGTLCGLSSYFIYSFVGFQMIALVGASGAIFAVLFLFAVMFPNAQIFLWGIIPIPAPILIIGFALFEIFDLLFSSDNVAHLVHLLGFFFAWLYMRIRFGIKPLKVWNIIR
>NZ_CP054692.1|WP_002695065.1|1097311_1098001_-|hypothetical-protein
MKKGLFLFTCILFSSLVYADSYSGASKTEFLVLRAPVWVFLEAQPGTMKEGEGEKFLPPVQALRELAAFIMSGMSYGWQFSYTPYDKKRNVTENFELVPISAVSPKTKRLRLMEPQVRYPYLYCWSEYTLFEDEARRREHWMSISFATVQGSGNGERKKELSGVYDAYKNAALQAVRNYVRKREKNKPKEIIGEMIIRENPRLFVDSGKFTAEIRVNIYIKEIIPYTIF
>NZ_CP054692.1|WP_024751741.1|1109524_1110487_+|recombinase-RecT
MNVNNTNKNQVTAKTKGGDLRSMIMANMDMFKMALPKAITPERMTRIAMTAVTRNPKLALCNQNSFFGALLTAAQLGLEVNTPLGQAYLLPYDSKNGLQCQFQLGYQGMLELAYRSGQFKRIKAVVVHEGDEFTYSYGLNAILEHTPSGNGNPTHVYALYELTNGGVDFEVWTWEKVMQHGMTFSKSFGNGPWQTAPEEMAKKTVLKALLKYAPKAVELAEAANLDEGIIDKKLVRNDGIAEIVTNIEYTEPVQQQTAVQYAEQDPVNANGKTRSSERQKSGAAAQMSKEQQMANEDEQAIEKFELQQNAMFDIAPEFPM
>NZ_CP054692.1|WP_002696692.1|1110502_1111306_+|hypothetical-protein
MKVTGQYLARKVYSNNVHFVMLKIDDKKQADLLDTLFKRKAERDARAGHESLLNVSFNLQYREKSYKQLRTVFALVTAIFISMDGRLPTEEEKYALYLDLLDVYALKTPSKIKPDTLRTIHLSESNTFEAAHFINGLMLHLATECDLDLDLQSDVKNLLWEWELHRGGEEKDPLDYYDTECTQLISEADWRELHQYSEASGLHEAIHLHHIVTRGANAAAIDKAWNWCALTSDEHEQLHHYGEKAFLKKYPHLEGKFKRAHRMAGKL
>NZ_CP054692.1|WP_174897000.1|1112307_1113351_+|hypothetical-protein
MKSNFKSCIFSETTKKQIDAMTDINMKLRFYEAVTNYGIYGIDPDFEGIDLLIWIPMKDIIDNATNKRGAPVGNANAKKANNKTSDSDTEQEKQIKYNETKKLPKNIESNSEQKKQMDLIKNKENNSKQEKQIKQLNSIKTNKTIRPNDNDNDNDNVNDNVNDNVNHPPPEDTAGQDIYTCSDKQEDEEVFSDFSENENLSQLAKDIYGVFVEAGINKPNTFLLFLQRDFQLGLDKLREQAIPVTPDILAACKNYAKVLALKKQQATWWNFTGGFDGFCGKNIILKFLPERFTLTQFEKNNRSPQAEKDYSKQDFSQSSIDEFFGKPQPPPQVVSADVGDELEGVMF
>NZ_CP054692.1|WP_174897001.1|1113364_1113514_+|hypothetical-protein
MRVLKQGKWQQVNITQSFLPDYLRQSKALCKTHGEYKCLIDTRTNESSP
>NZ_CP054692.1|WP_174897002.1|1113482_1114121_+|ATP-binding-protein
MTQEQTNHPLERAELETQKELEQFEARLKKIDGLPKRYRNAGFKNFVVDEKNKTARDSVLSFAKNPNNKWLLLLGKNGTGKTHLAHAVLKLTGGIFRDFDDVSTDLLDAQAGYGEGLNKTLDKYANAPMLVIDEIDKVKNTEGRITWLNTILRRRYNEMLPVVLVGNIDLERLCQIIDLHGGEAMRDRIKELGIVVNFNFESYRPVLRNEKE
>NZ_CP054692.1|WP_174897003.1|1114738_1115140_+|hypothetical-protein
MKMDLTKKIDDLIAANDESGLDAIIKEHGGYIFKTEYLGFTSNHGLMGEYFYSNSFEEAVGKIKEYLSIPLQKKEDGLSMSLILITKFLNGELEYGANLFSKKQTGKGITSTCNLSVLFTFHPLAIIFNLSIL
>NZ_CP054692.1|WP_174897004.1|1115497_1115713_+|hypothetical-protein
MIVCPSCKKPVKYIASKDNTILIVNVELKTLVNERGRFIQGYELHECPLKLQQKQYRQRRRKHEKRKRNST
>NZ_CP054692.1|WP_148883995.1|1115684_1116482_+|hypothetical-protein
MKKEKETPPEKKPKEKLKKTTAAKTSAAKKSVKKEASLSKNDVLISMETFDVGDAKITEKEKRFVFWYTYPGSDAFMVQARAAELAGYKSPTSEGYRLRKKDTVAKAIRYVLDTNIKKDLDEEYYKILELKKRRIHYDLADYVKKEQKTIITKEGIEKIIEIEELKDLQDLTPQQRQVIDGLDLKGGNNTWVYIFADRDKAMADIIRIREKLFEREQGDEGDNIEFVAEIIKEGLALKVSARNKKRAISESADFLELSNEGSEEL
>NZ_CP054692.1|WP_174897005.1|1116503_1116752_+|hypothetical-protein
MPIFAYIFAVFYPLFSVLCRTIAGGGGIKMGALFTPDERLNYTDAFIKVDEKPIDLDFWQERFLMDAQRHSIVLKSRRTKAW
>NZ_CP054692.1|WP_174897006.1|1116757_1117309_+|hypothetical-protein
MDGNRTKYVRQFVSYNEEDAKEKIQYAQEFYASIHPKAKKKLRSCTKTAMEFYDKSGKTVSRLISIACRPPRGRGGDIVFDEMAIYPENKAEVIYTAGIPVTARGGCVEIGSTPLGKIGRFYDVFSTRKNTEPITATLFPGGFLQHSVQTLKRRCATLPQWIQKSGCIAMERLLLLKPSRQCF

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Crispr_ID: NZ_CP054692_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_5

1282851-1282914

Orphan

Consensus_repeat	Method
ATTTCACCCCTATATTTTACCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_5

>merge|NZ_CP054692|5|1282851-1282914|CRISPRCasFinder
ATTTCACCCCTATATTTTACCGATGTCTTTAATCTGTGATAATTTCACCCCTATAAGTTTTCAA

>NZ_CP054692|5|5|1282851-1282914|CRISPRCasFinder
ATTTCACCCCTATATTTTACCGA	TGTCTTTAATCTGTGATA
ATTTCACCCCTATAAGTTTTCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024753392.1\|1288941_1289403_-\|(2Fe-2S)-binding-protein	unknown	unknown	gnl\|CDD\|224991
NZ_CP054692.1\|WP_002695817.1\|1275107_1276043_+\|ribokinase	unknown	unknown	gnl\|CDD\|238579
NZ_CP054692.1\|WP_002699885.1\|1285114_1285801_+\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NZ_CP054692.1\|WP_039943958.1\|1294536_1295097_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223394
NZ_CP054692.1\|WP_024753385.1\|1271397_1273977_-\|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP054692.1\|WP_156009304.1\|1267815_1269024_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753393.1\|1289945_1290824_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148878728.1\|1282978_1284232_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP054692.1\|WP_002697839.1\|1269398_1271270_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897043.1\|1285856_1288112_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|236637
NZ_CP054692.1\|WP_024753391.1\|1280965_1281463_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225814
NZ_CP054692.1\|WP_024753387.1\|1276039_1276741_-\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP054692.1\|WP_002699889.1\|1288108_1288942_-\|FAD-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|224238
NZ_CP054692.1\|WP_044634354.1\|1278346_1279675_-\|divergent-polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|377404
NZ_CP054692.1\|WP_002699896.1\|1291232_1292453_+\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_CP054692.1\|WP_024753388.1\|1277097_1278126_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP054692.1\|WP_024753383.1\|1267338_1267755_-\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NZ_CP054692.1\|WP_174897045.1\|1295204_1296002_-\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223377
NZ_CP054692.1\|WP_174897044.1\|1293146_1294319_+\|N-acetylglucosamine-6-phosphate-deacetylase	unknown	unknown	gnl\|CDD\|272968
NZ_CP054692.1\|WP_148878815.1\|1279766_1280924_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024753392.1\|1288941_1289403_-\|(2Fe-2S)-binding-protein	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	1.06768e-62
NZ_CP054692.1\|WP_002695817.1\|1275107_1276043_+\|ribokinase	gnl\|CDD\|238579	cd01174, ribokinase, Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.	1.55192e-111
NZ_CP054692.1\|WP_002699896.1\|1291232_1292453_+\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.36927e-100
NZ_CP054692.1\|WP_024753385.1\|1271397_1273977_-\|heavy-metal-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP054692.1\|WP_024753383.1\|1267338_1267755_-\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	7.87181e-53
NZ_CP054692.1\|WP_148878728.1\|1282978_1284232_+\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.62756e-09
NZ_CP054692.1\|WP_024753391.1\|1280965_1281463_-\|hypothetical-protein	gnl\|CDD\|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	1.30833e-11
NZ_CP054692.1\|WP_174897043.1\|1285856_1288112_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|236637	PRK09970, PRK09970, xanthine dehydrogenase subunit XdhA; Provisional.	1.57035e-169
NZ_CP054692.1\|WP_044634354.1\|1278346_1279675_-\|divergent-polysaccharide-deacetylase-family-protein	gnl\|CDD\|377404	pfam04748, Polysacc_deac_2, Divergent polysaccharide deacetylase. This family is divergently related to pfam01522 (personal obs:Yeats C).	4.03124e-74
NZ_CP054692.1\|WP_024753387.1\|1276039_1276741_-\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	6.6686e-143
NZ_CP054692.1\|WP_002699889.1\|1288108_1288942_-\|FAD-binding-domain-containing-protein	gnl\|CDD\|224238	COG1319, CoxM, Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs [Energy production and conversion].	1.53378e-51
NZ_CP054692.1\|WP_002699885.1\|1285114_1285801_+\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	9.16261e-78
NZ_CP054692.1\|WP_024753388.1\|1277097_1278126_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	0
NZ_CP054692.1\|WP_039943958.1\|1294536_1295097_-\|hypothetical-protein	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	1.15533e-08
NZ_CP054692.1\|WP_174897045.1\|1295204_1296002_-\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|223377	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only].	1.72524e-68
NZ_CP054692.1\|WP_174897044.1\|1293146_1294319_+\|N-acetylglucosamine-6-phosphate-deacetylase	gnl\|CDD\|272968	TIGR00221, N-acetylglucosamine-6-phosphate_deacetylase, N-acetylglucosamine-6-phosphate deacetylase. [Central intermediary metabolism, Amino sugars].	5.62888e-130
NZ_CP054692.1\|WP_148878815.1\|1279766_1280924_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.17877e-33

>NZ_CP054692.1|WP_024753391.1|1280965_1281463_-|hypothetical-protein
MLVIAVFYNTLIYVSFMFLTVYLLFKIKPIKDTVMTSCQSAPEWAARIGVIIVFSIANMLVSKFSFEANGALVNIRTGITLVGTVLFGIIPGFAISISGGLFRYSLGDWSALPCCVAAIAAPIAPAIFIYFFKKKNAEFTFIIISILSLIAVFWEVIHLLVLLPT
>NZ_CP054692.1|WP_148878815.1|1279766_1280924_-|methyl-accepting-chemotaxis-protein
MLLLPMALSNFIFVFTTLTLTHDLRQQTNIRGIQENERFLRERATINSGVLKDVNAGLDALSEHGDVLYEQMEVTGQSIHHINIGIKNFEEKLQTHGVTVGETKTELESIIQRIKNLDTDITTQAESLQRTFAFLSEMIAKMDMTGKHFEESRQVIQSLYEVAINGKQAAASVNTIVLQIVEKSEGLLQASSIIQNIASQTNLLAMNASIEAAHAGDSGKGFAVVAGEIRKLANETTIHGMEIAKILKETSEIINALKDSGKMAEQVFGSVFNLTEQVSNRENLIMQEIHEQSKHSAEILKVTEEMNSITKGVKDSSLKMLNGSDHIVNEMRQLDDIAKNLTSSMEEITRQVNSINDAAKDVEAVSEANKKSINTLTNEIRRFQL
>NZ_CP054692.1|WP_044634354.1|1278346_1279675_-|divergent-polysaccharide-deacetylase-family-protein
MLLKKPKKKSTKAKKKPAKKTKPLTPAEKRTYGIIAAVIGAVCILLLTVNFFLLPRGQKKNASAPQRAEPTAQNTNQSAETKTSQKIAAQEEAESSFAPKVKPEKTPCLEKNKPPAQKTETIAHAQKQKTAQSEVKPAPHAKEKKIKNSEPAVKVIKERTAAQNEKKPVQPAQVKKQEQQKPVQEKKLEKPKPVQPAKKEPVAVAARPEKPPVPKPHKGTLIFVFDDAGHNLAQLQYFLRLPFPCTIAVLPRLAHSAEAARRIRAAGKECILHQPMQAINPNVNPGQGAIKPGMTAAQIRETLNKNIEELWPIAGMNNHEGSLITADENAMQAVLDTVAEKHIYFLDSRTNVHTVVPRIAKERNMVIWERSVFIDNDKNRKAMENEIKKGLKIAEQRGCSIMIGHVFTVELAELLTEMYPTLVEEGYSLSTIAQFAANKIDE
>NZ_CP054692.1|WP_024753388.1|1277097_1278126_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MKVLGIESSCDETAASIVEDGKTILSNKVATQIPFHEIYQGVVPEIASRKHIEWILPVVKEALKDANLTIQDVDGIAATACPGLMGSLLVGLTFAKTLAWSLQKPFIAVNHMLGHLYAAHLTEDIQYPYLGLLVSGGHSIICKVHNFDDIEVLGTTIDDAPGEAFDKVAKFYQFGYPGGVIIDKLAKNGDPHAANFPMPIIHNEGHTYDVSYSGLKTAVINQTELFWNPEYEKTPENIAAAFQDRAVKILLRPLLQAARDTGLTTIVAGGGVAANSLLRQKLAEQKDLTCIFPPLKFCTDNAAMIAGLGYQYLSRGITSPYTVGASPRVQGFSKKGRRPKKA
>NZ_CP054692.1|WP_024753387.1|1276039_1276741_-|purine-nucleoside-phosphorylase
MSIHIGAKKGEIADRILLPGDPLRAKFVAENFFENAVCYNEVRGMLGFTGTYKGVKVSVQGTGMGLPSHSIYVTELFKDYDVQKAIRIGTAGSLRKDIPLRALVLAMAASTDSGMNTHRFEGRHYAPSANWNLLKHAYEAAQKIGAETFVGGVASSDVFYDEKETWKLWAEYGVLAVEMETAELYTLAAKYNREALSILTISDSVVTGEATSAEERQLTFKQMMETALEAIIA
>NZ_CP054692.1|WP_002695817.1|1275107_1276043_+|ribokinase
MQKNILLIGSMNMDLVVQCNTVPVRGETLLGQQFHTTPGGKGANQAYALACQGSEVYFCGAIGKDEFGTRLVKNLQSVGVHCEQIKTLDGISSGIAIILLETSCGDNRIIVIAGANEKVTADDAKAALSSRKYDALVLQLETPMPTVEAAVIEAQKKNIPVFLNLAPAQAIKPELLPLIDFLIVNETELSLLAGKTVTDLQSGAESAALLRKKEAKTVILTLGAKGAAAFTADAEIFVPAFKVEPVDTTAAGDSFIGAFVTAWLETNDMKTALTRGNACGALATLTVGAQASIPQRKAVDDFIAANVSAKS
>NZ_CP054692.1|WP_024753385.1|1271397_1273977_-|heavy-metal-translocating-P-type-ATPase
MMIQEKFLVGGMTCSACSAHVQKAVEEQAGVQSVSVNLLTNSMKVEFDQNAVSEKEIIAAVEQAGYSASVSHKEKNQPEKTAVDIVQKEIQEMQHRFIASLCFLLPLMYVSMGSMIGLPTPAFLKGAENALINVFTQFLFTIPIIVINRQFFVSGFKALVRKAPTMDSLIAIGSAAALVYGVFALYRIAYGLGHNDPELVHRYMMDVYFESAAMILTLITLGKMLETKAKGKTSAAITKLIQLSPKTATVIREETEHEIPVEEIVKGDIILIKPGSTIPVDGIIIEGDTSIDESAITGESIPVEKTVGDTVISASANISGTIRFRAERVGNDTALAQIIALVEEASSSKAQVSQLADKISNYFVPAVIGISVLSFIVWMAAGAGFEFALARSISVLVISCPCALGLATPTAIMAGVGRGARLGILIKSAEAFEAAQKTEVVVLDKTGTITQGNPQLTEILCMQDSYSKKDVLQLAYSLELLSEHPLATAIIKAAEAENLQAFRITNFLAEHGKGISGVIDAPSLPFHEKKVFAGNLKLLADRQIAHDSFQTEIEAIGMKGGTPLYIALDKTLIGVLAVSDPIKADSAEAIAELRQMGIRTVMLTGDNAQTAQAIKKTSGVDSYVAELLPQDKKTAIDEIKAGGKITAMVGDGINDAPALTAADIGIAIGSGTEIAIESADIVLIQESLFGAVNAIKLSKAVLRNIKENLFWALFYNTLGIPLAAGALYPIFGLTLSPMFAAAAMSFSSVSVVANAIRLNAFKPKRLSAHVNNTMFDKPADNTQKPEHKSMEEKMESTTIKIEGMSCGHCSARVEKALNALEGVTATVNLEKKEATVQYPESIGIDSLKKAITDAGYEAL
>NZ_CP054692.1|WP_002697839.1|1269398_1271270_-|hypothetical-protein
MENGSELLNLLKSFALRADSSYVSLSEFCGYLHKYSRRFLQEKPELIVYLEITEDTLLEELKALQTEGKIEITEDKAKKQVIFIPHYFINKVTRRYKEIQEKPEIPFPLTRDTPRNFSTRFLKKISLEKEFAELSENPTGSFFLYELGFSDDTPSLIFPANFTAENMLLFAVDKIRMFLHEDESHDFIQKKLLMANPGKEISVRSFLSKMRARPAAIVDTLKQSGDIYLLWSYLCSFIRQEFAKKTEKLPDEVALIQGVFITEYLNNYYRNKAQQNLQRETALKNLELNLQKQPYYFNMNMITNFKDTRGVPLLGQYSEDDLKTYMENQTTEITSGSLPHLLSFQTFDKDRYYVLLEKVIPLIISLTTENRKIIKEQCMQYWYDQMLKFIQTESMKSDEAFEIFLKEICKEQVPHLYALLNSSFIPPLVIEPKLVDTQSVELNRIFPEGKLALYQDLFALKRAKLLTDTRILLPFWYTLPFFSAIVAFFKRIRKPKKTPQTQKPEEKTTEVKATIKDIAVSLGPEFIPAGLSIDEALIKQLDLWNHNINEETRNTITQDVNAFIRDYIRGIQKTLTNSTFNAERIRNLAQTLADTPSLRSIKNKAALRNYIELYILKLVQLYL
>NZ_CP054692.1|WP_156009304.1|1267815_1269024_-|hypothetical-protein
MNRKKIIVITSILLAITVITFFMVIKKITDKPFVIAYYNVPEKVQSAVQASVQACFQDDRLTVKYVQLDKSRELQEQLTKNKKISIIITQNSKALADSYTQLKSLDKELFNAFPSTFQNIYFPQENETEPLFLPLALNPLALLCYQPMFNQLTTKHPENVQAWENMLGELKAKVDYPLIVAGTNDTNLFYMIDSVMAAQGDTLKEFTTEFTAPFDLHAYCPPPLQRALKTLVNWRKKGYLHPEWFRLQDMDISIFMQTKHTAMVCMDLAALEELDSNTLADFETSSVPLSFELIKRNYPTELFVIAEMQQSLPQTEKLLAFFAANETQTDFAKNASLAPASLAAQTVDARASSARYRVASANLALPSLKEAVCKTESEKSQLASQIRDYIEVNGVGYDWMSE
>NZ_CP054692.1|WP_024753383.1|1267338_1267755_-|YjbQ-family-protein
MKTLTQELWFNTKKKHQFINITPEVESLVKKSGVKEGLCLVNAMHITSSIFINDDENGLHQDFETWLEKLAPHEPVSSYHHNVGEDNADAHMKRQIMGREVVVAITNGALHFGPWEQIFYGEFDGCRKKRVLVKIIGE
>NZ_CP054692.1|WP_148878728.1|1282978_1284232_+|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGICSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRHITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNHLFKIEQNKFGAGTMVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP054692.1|WP_002699885.1|1285114_1285801_+|DNA-repair-protein-RadC
MGAKKKPDLRERLLEKGADSLSDSELLAILLRTGIKGKSVMQLAEEISMHADRHQAENIDRILYSIKGMGEGKITTILAAFELGRRYYGVGNQKIKHPSDIVLFLRHYATRKQEQFIVASLNGAHEIIAIRVVSVGILNRTIVHPREVFADPLSDRAASIIIAHNHPSGSLQPSEEDIAITERLYESGSLLGIQVLDHIILVPNGDYYSFVENKMFVAEKLLGEKKVL
>NZ_CP054692.1|WP_174897043.1|1285856_1288112_-|molybdopterin-dependent-oxidoreductase
MNNYKYVGKKFIRQDSFDRVTGVTKFTADIKRHMLLYGKLVLSEKAHADISFDFDEALLVPGIYTILTYKDIPHIPYNCMEWFTGISAYHDEYILHDRARFVGDRIALVLGENKHAVEEAIKKIIVHYKELPVITNLDDAQKDTVIIKRDSNLAYEKKIGCGDFKKALDEADYIIEDPGSTPRTHHLAIEPHAALAEFDTFGNLVIHSPGQIVFAIQMHMARILQIPYSKIRVIKTNMGGSFGGKQQPLLELIAGAVAWIIKRPVLVYMDREQSIIGTFTRNPTKVKITTAIKKDGTILGRKVETLVDGGAYDTNNTSIINAYAKKLFRLYKIYNQEFHGKAFYTNGIPGGACRAYGGPQSHAVSEINITNAAKKIGMDPCEFRLKNLVDPYDDDPVGGPNLGKAGMKDCIKAGMKVFNWKEKYEHIHKKNTDRYAYGVGVACATHGNGYLGVFPDFTNVEMILNPDGTLFVKIAVHEQGCGTIDSLCLIAAEAIDMNPANITITEADTAISPYDSAGTQASRVTFVAGGALIEAGTLLKQKIFNTLHTIEHIPLEDMYSDCGTVKIKNSDKTYTYAEIATMAEKSLSNPTSVYIHHVPKSNPAAFAACFAEVKVDKKTGLVEITDLLAVHDIGKAINPLLVEGQIHGGCQFILGMALSEEIIREPNGSIKNKTLSKYHVLNAQDMPAVKVMLIETEDETAPYGLKSVGEIAAVAPAPAVLNAINHALGTNICDYPATPERIIESIEKLPN
>NZ_CP054692.1|WP_002699889.1|1288108_1288942_-|FAD-binding-domain-containing-protein
MFYAAKDKNTLLGLLEKSNDTTFIIAGGTDLVIQLKNSKHTVYDIIDITKINEFAHINETSEYLQIGALVTMRELCESPLVKTDYKALYQAAYELGSTLIRNRATIGGNICNASQSADCSLVLFSYDARIKILNFEGLEKTVPIHEFILGKEKTILSKKEIVTEILIPKKKRVSAFKKIGARKAVTISKISCALEYIPKNTTLTHVNVYLGAVGIKPIKAHLIESYLENKNINDIRLHDLQTIASNEIENAIPNRSSKFYKKIAVQGLIEDLLKDLQ
>NZ_CP054692.1|WP_024753392.1|1288941_1289403_-|(2Fe-2S)-binding-protein
MKINAIVNGSPVEGEVDEKLRLIDFLRENLDLTGTKEGCSEGECGACTILLNNEAVPSCTVLAGQINECEILTIEGLAQNGELDILQKKFIEYGAVQCGFCSPGFLISAKALMLHNKNPTLEDIKRAIEGNLCRCTGYIKIIEAIQAAIEERT
>NZ_CP054692.1|WP_024753393.1|1289945_1290824_-|hypothetical-protein
MTHTVCQYPSGNEIFLREALYRNEYIYSLKCFMLNGQFTTQKAALLKMRVLLACIEASAIVIDAYIQTEEKLSYLFVLCSSKLDSSNFSAIIRRYTPKALIEEMDEKTALHCLQNISVEALKNKKIPYIFPLNELHSSKECLLSLLIEYRALTAEMDEAFKHIRSQNSLRGLRRRAFDFLEKKAKDEKTLSNRRAENFLTDIVIFEERKRIASVAVFQIETINRRPHKSSLVIKKESGGGELFYDKLYCIKKIDFLSSRFTKRLARGLYQMEVPGKKTSFTVNFTVPSLFIL
>NZ_CP054692.1|WP_002699896.1|1291232_1292453_+|trypsin-like-peptidase-domain-containing-protein
MKLYSRIQVVFIVAVAAIVVGGGALFFGYHLSQKQNAHSMPAAETSDIPIIAVAPAGESLQPYPVADKTKYTVNEQENISVYEQTNEAVVNITTEIMGINWILEPVPLEGGSGSGSIIDPRGYVLTNTHVIEDASKIYISLHDGSQYKASIIGIDKENDLAVLKFTPPKNVPLTVIQFGESDGLKVGQKVLAIGNPFGLTRTLTVGIVSALGRPIQNEKNIVIKNMIQTDTAINPGNSGGPLLDTQGRMIGINTMIYSTSGSSAGVGFAVPVNTAKRVVADIIKYGKVRRGSIDAELVQLNASIANYASLPTDKGLLVSKVKSGSYADRAGLRAGTSPVRYGLGRRAAIIYLGGDIIVSIAGQPINGLSDYYSVLEDKKPHEEITVTVLRGNKKVNLTMTLSERTE
>NZ_CP054692.1|WP_174897044.1|1293146_1294319_+|N-acetylglucosamine-6-phosphate-deacetylase
MSLPICFHNGTIVSGFSKMENSCVLLQDGKIEDVFSERRFQTRHFNADVRIIDVQGAFIAPGFIDTHIHGFAGYGTEDNSTEAMLQMSIELARYGVTSFNPTLYPSERDNMLKCIRAIVKAMGKEKGAKIMGLHLEGPFISSEKLGVQRPETVSPVDMTFMEELWAASKGHIVNMTVAPELKGMRKLALYCAKKNIVLQAGHTNALYEHMIEGMQAGIFHSTHLFNAMSQMHHRNPGAVGAVLIHPEMSCEIIADGIHVHPDLIRLLVRDKPLDKIVLVTDGLKPTEQYEGQLIANGEEVVHRDGCFHRKTDDVIAGSSLSMIRGVKKLTSFGLLVETAVKFATINPAEIMRYSKLGAITPGYEADITVFDKQFNVLATVIKGSLKKNLF
>NZ_CP054692.1|WP_039943958.1|1294536_1295097_-|hypothetical-protein
MLLLNGIYLAPYMQLATLLIGKERHSGGNMFRHQIDTMGILIDYGYIDSVLLKASLVHDLIEDVPDFNVNELLNIDSEAGKVYELVLEVSRRPGQSKPDYLKNIIKKGSHNAKVLKCADRISNMISLGFVNDPEFIERYSDETEIYVFPIALEVNYRMYDELLRLVMSRRKYLLDFQFLHKNKKAT
>NZ_CP054692.1|WP_174897045.1|1295204_1296002_-|SDR-family-NAD(P)-dependent-oxidoreductase
MKRIAIITGASSGFGREYVLQYSAMGECDELWLFARRKEKLEETKQAIFLQNGGNIPNVRCVAVDIAGEKGVQGFSRLLQEESKVAPFTIELLINNAGFGTYGEFTETEIKRQLASIEVNVYALTGFTAAVIPYMSTGGAIINLASMASFMPVPNFAVYAATKAYVLSFSISLSAELREKGISVLAVCPGPAKTEFGAVAIQKKDARMKHAKPADKVVAHSLRCLKNGRRLCIYSLSWKISAFLSRFIGRYFFANFVFHKIVRIS

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Crispr_ID: NZ_CP054692_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_6

1405297-1405456

Orphan

Consensus_repeat	Method
AAACCTGCGAGTTTTAAAGCTTTACAAATAGTTCTGCTTTAAAACGTCGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_6

>merge|NZ_CP054692|6|1405297-1405456|CRISPRCasFinder
AAACCTGCGAGTTTTAAAGCTTTACAAATAGTTCTGCTTTAAAACGTCGCTGCTGCGTGGAACCACCGCCGTCCGTGGCGGTGCTGATTTTGACGTCCATGTCAAAACCAAACCTGCGAGTTTTAAAGCTTTACAAACAGTTCTGCTTTAAAACGTCGCT

>NZ_CP054692|6|6|1405297-1405456|CRISPRCasFinder
AAACCTGCGAGTTTTAAAGCTTTACAAATAGTTCTGCTTTAAAACGTCGCT	GCTGCGTGGAACCACCGCCGTCCGTGGCGGTGCTGATTTTGACGTCCATGTCAAAACC
AAACCTGCGAGTTTTAAAGCTTTACAAACAGTTCTGCTTTAAAACGTCGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_052335789.1\|1409266_1409758_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP054692.1\|WP_024753468.1\|1402967_1403414_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753461.1\|1392475_1395205_+\|PBP1A-family-penicillin-binding-protein	unknown	unknown	gnl\|CDD\|227342
NZ_CP054692.1\|WP_024753467.1\|1401478_1401868_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897058.1\|1408078_1408855_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP054692.1\|WP_174897057.1\|1406897_1407773_+\|TPM-domain-containing-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP054692.1\|WP_024753472.1\|1410163_1411051_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_052335790.1\|1409757_1410078_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP054692.1\|WP_002698544.1\|1403743_1404781_-\|aspartate--ammonia-ligase	unknown	unknown	gnl\|CDD\|235456
NZ_CP054692.1\|WP_024753464.1\|1397738_1398362_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002698541.1\|1401937_1402930_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	unknown	unknown	gnl\|CDD\|223691
NZ_CP054692.1\|WP_024753475.1\|1413913_1415200_+\|arsenic-transporter	unknown	unknown	gnl\|CDD\|238536
NZ_CP054692.1\|WP_002698549.1\|1406263_1406872_+\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
NZ_CP054692.1\|WP_024753466.1\|1398651_1400958_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|213022
NZ_CP054692.1\|WP_148878860.1\|1396104_1397007_+\|ankyrin-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|293786
NZ_CP054692.1\|WP_174897301.1\|1415262_1416450_-\|tRNA-4-thiouridine(8)-synthase-ThiI	unknown	unknown	gnl\|CDD\|234960
NZ_CP054692.1\|WP_024753474.1\|1412407_1413643_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|350610
NZ_CP054692.1\|WP_024753469.1\|1404827_1405088_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753473.1\|1411301_1412339_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|224919
NZ_CP054692.1\|WP_024753465.1\|1398393_1398600_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_052335789.1\|1409266_1409758_+\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.68892e-53
NZ_CP054692.1\|WP_024753461.1\|1392475_1395205_+\|PBP1A-family-penicillin-binding-protein	gnl\|CDD\|227342	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP054692.1\|WP_174897057.1\|1406897_1407773_+\|TPM-domain-containing-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	6.01898e-61
NZ_CP054692.1\|WP_174897058.1\|1408078_1408855_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	1.26494e-69
NZ_CP054692.1\|WP_052335790.1\|1409757_1410078_+\|hypothetical-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	5.47851e-09
NZ_CP054692.1\|WP_002698544.1\|1403743_1404781_-\|aspartate--ammonia-ligase	gnl\|CDD\|235456	PRK05425, PRK05425, asparagine synthetase AsnA; Provisional.	0
NZ_CP054692.1\|WP_002698541.1\|1401937_1402930_-\|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA	gnl\|CDD\|223691	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only].	3.00239e-59
NZ_CP054692.1\|WP_024753475.1\|1413913_1415200_+\|arsenic-transporter	gnl\|CDD\|238536	cd01116, P_permease, Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.	1.01628e-49
NZ_CP054692.1\|WP_002698549.1\|1406263_1406872_+\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	8.73974e-86
NZ_CP054692.1\|WP_024753466.1\|1398651_1400958_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	7.91712e-24
NZ_CP054692.1\|WP_148878860.1\|1396104_1397007_+\|ankyrin-repeat-domain-containing-protein	gnl\|CDD\|293786	sd00045, ANK, ankyrin repeats. Ankyrin repeats are one of the most abundant repeat motifs, and generally function as scaffolds for protein-protein interactions in processes including cell cycle, transcriptional regulation, signal transduction, vesicular trafficking, and inflammatory response. Although predominantly found in eukaryotic proteins, they are also found in some bacterial and viral proteins. Less is known of their physiological roles in prokaryotes. Some bacterial ANK proteins play key roles in microbial pathogenesis by mimicking or manipulating host function(s). The pathogen Providencia alcalifaciens N-formyltransferase ankyrin repeats function in small molecule binding and allosteric control. Ankyrin-repeat proteins have been associated with a number of human diseases.	3.18108e-23
NZ_CP054692.1\|WP_174897301.1\|1415262_1416450_-\|tRNA-4-thiouridine(8)-synthase-ThiI	gnl\|CDD\|234960	PRK01565, PRK01565, thiamine biosynthesis protein ThiI; Provisional.	2.08452e-180
NZ_CP054692.1\|WP_024753474.1\|1412407_1413643_+\|hypothetical-protein	gnl\|CDD\|350610	cd14728, Ere-like, Erythromycin esterase and succinoglycan biosynthesis related proteins. This group contains erythromycin esterase, which shares conserved active site residues of the Tiki/TraB family. Erythromycin esterases (EreA and EreB) disrupt erythromycin via the hydrolysis of the macrolactone ring. A critical catalytic histidine acts as a general base in the activation of a water molecule. Macrolides act by inhibiting bacterial protein synthesis by binding at the exit tunnel of ribosomal subunit 50s, blocking the translation of the polypeptide. Erythromycin esterase, typically found in integrons and transposons, confers antibiotic resistance through the disruption of the drug ring structure. EreB substrate profile is substantially broader than that for EreA, being able to also metabolize semisynthetic derivatives such as azalide azithromycin.	4.16757e-08
NZ_CP054692.1\|WP_024753473.1\|1411301_1412339_+\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|224919	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism].	8.32817e-101

>NZ_CP054692.1|WP_024753469.1|1404827_1405088_+|hypothetical-protein
MNKVNSGKQALFGFGLNHNLIVVCKLHIGGLVSSQIRETRIVKNFIKKSSTRRNGEQFTIVVLKSGFNVRGGSDFAVRVKTKPCEF
>NZ_CP054692.1|WP_002698544.1|1403743_1404781_-|aspartate--ammonia-ligase
MSKLKLPKNYQPILSIKETEQAIIKIKNFFQINLSTELNLTRVTAPLFIPQGKGLNDDLTGIERPVSFPVKDMNDERLEIVHSLAKWKRVKIAEMKLKTGFGIYTDMNAIRADEELDNIHSLYVDQWDWECSMPEENRTLEFLKTEVKKIYYCLKRTEFFLYDNYPNLEPRLPEKITFIHAEDLYSLYPKLTAKEREHKIAEEYGAVFIIGIGAPLANGEPHDGRAPDYDDWITETGAGKRGLNGDLLVWNPVLQESLELSSMGIRVSPETMKAQLSFRNALERSSLYFHTLLLNNKLPQTIGGGIGQSRLCMFFLRKAHIGETQVSVWPDDMIRKCSEHNIPLL
>NZ_CP054692.1|WP_024753468.1|1402967_1403414_-|hypothetical-protein
MNKSLFFICSILFLGFFSSSAVTAQEAERAGGNEQSQETIPDLYYISAPILKVFPHKLGYYVIYRREGFKTGEVFIPHNWFKPEVNKARLVLVNTRVNPYLTFFIKEGAFYSVKIAAPQNLKSTFWGNLKAPALYNDKFNVETLPLEF
>NZ_CP054692.1|WP_002698541.1|1401937_1402930_-|bifunctional-oligoribonuclease/PAP-phosphatase-NrnA
MDTIQVPEISDELVTFINSHSVFLIAGHKEPDGDCIGSSLALSLFLQRLGKKTVLLSAGPFKRIEIKCYEELFFEHVPENIVPNNETALFVVDCSNVERTGDLAEELKPFKPVFIDHHATNTEASPASLIMKTSPSTTYLIQHIIEKMTGEVTEEEAKLLFFGLSTDTGFFRHLDYNSAEVFAAASRLVRAKASPKRIFAQINGGRSFKSRMLISKILSRLTPYYDGKLMLSFETYEDTQEFGLEGRDSDALYQLIQSIAGVEAIVIIRQESETHCSVGFRSFDKIDVSVIAASFGGGGHKQASGLYIKGQINNLIPKFVKAFENQMLLL
>NZ_CP054692.1|WP_024753467.1|1401478_1401868_+|hypothetical-protein
MITSSAPLDSIPYAAMPQISSGEKTYLPVANNQLVYAHFEHVAGVPAESNQKGVSVSELQILNSLIRRLVSLQEEKDFLPLKKEDLSTAQMDKMLEFFHTQITQIEAKNKNIPYAHHSSIESALFSINI
>NZ_CP054692.1|WP_024753466.1|1398651_1400958_+|polysaccharide-deacetylase-family-protein
MKHAMRYFSLLTVFFSCCFFVSALTSFEAVDINSENNLLFSVKTDVLGQYSYSTLVQKNIESGKTELLTFFPERVDSLADGAIIQIRNRYGIVRIRTADGTIIPFESFLSMHGQALIKQGMLDSCQTSPDGRWISFIEPISPAYGRLVLYDVQKGARYILAEKIKRAVQALSWAPDSSAFILEKDLNLYFLRPQWFETTSSIETIQRKIGSGTIETIQWISSANLLAVQGNAVYKIGVSEIFARSFYTPIVQIGTLVGSLPFAFDPSRDVLSLSPDAATAVFVKDKRHVYHCSLYGDDYLVSESFQSVPYLLLSGNNADIKIYWLKGRNPIIYSAAIREGNLSIEVRKLVYKNGSGFFKTIAIPNNAQLLAVSPAGEKLAFAHTNGFFIYDVQTERIILQRDGERAVSAAWQNEDRVCIGGMQSLQSFSVSGGDSLFLLYSQVSAFSWSRSEKSVLAEVRTAAHEKPQIIRYLDNLKWERELYEALAAHKTFNAAYRVYIDYQGGFFSNMIYLRSLYSNTTAALYAGLPAYIKRRPSKPVSAPKNTPGFFTHGMRNGGKEVALVFDLVDNIEGLPEILYVLKTHSITGTFFINGEAIRRHPVAVKEIALCGHQCGSLFFTSWNIATPEYRIDEAFISQGLARNEDDFYAATGKELSLVWHTPFYVSSPMVLKAGRKSGYTFISPDVSVPDWINSQSSVAVPKLYRPAADLVELCISQTQPGSIIPIRIGRQDSGDRCDYLYEHVELLINALSEEGYTIVPLQKLMQTR
>NZ_CP054692.1|WP_024753465.1|1398393_1398600_+|hypothetical-protein
MENKKNIHKTPLFTESRGAEQSAENDVNTVFCTLEKVQKEFTNKQIDILDAKLKQIEDELTAFIDSCR
>NZ_CP054692.1|WP_024753464.1|1397738_1398362_+|hypothetical-protein
MKNNHSEDAAFIAALEYILNKASIKEIDAFEEAVQRRKRSFESFPGLRSLNPEEMAKKMSSSIQKSIDASMLGVRNTVRNFAADMLAKEAPELSQEQLENLLDSWIPEAPSYTAEGGTVRHSIAKAGKVNGIPADALYGMILQFVSYSIGEMSKEELKELQESMGDWTGVYWKRFPADIQREIKSFLQGEINSGQFRKSIQALLGLA
>NZ_CP054692.1|WP_148878860.1|1396104_1397007_+|ankyrin-repeat-domain-containing-protein
MRVAIFFDKPKEETASAIKKIISDKNCDVVEYCVEDVWDENKCKNPISLLHEVTHILFIYSIDPVTDAAFIFFSGFASGKGIQIFLLQSGGTVSIPKNCSHLVAILTVNTFEQYFIAEQKRFTELEKKQRARFALLEKGYPCFDANFIAAVIDGDAEIISLFLEAGFNASLRDACGTPVLSLAVRNSQQDAVALLITQGANVDLTADDRQYSALMDAAQLGNTAIAKILLEAGANPDVKSKDGQTALVLAVGKGDLPMIKILAKYKANPSISDNLGLSALGYAKLFQNKEIISLLESIQQ
>NZ_CP054692.1|WP_024753461.1|1392475_1395205_+|PBP1A-family-penicillin-binding-protein
MRGKVIFIYLFFLFAILISGSALLGYLLASTVNIKQSERFTDFNPVLPTRILDIRGDLITEFSSDEKREIIKFEQISPYLIAALLTREDRTFYSHKGYNLKAIFRAAIGILTDRSLGGGSTLTQQIAGLLYCDRTDQSIKRKVKELWWALQMERRYSKDEIMELYLNKVYFGGGTYGVNAASRFYFGHPVQEITPAEAAILVILLSNPAYYNPFEYPNRARERQAYILSEMTKLGYISREEQEESYNEYWANFDYTRTTSSAYFNREDKAPWFSEYVRRQLDNMMYGTMNLYEDGYTVYTTCDLRHQTVAEKQVTDYIDIANQRVRSSSSTSFAQGQTYSNITALLSLTFNLPQLRVGAKQVQIKSTAYYRNKLNPLVDMMALICGMDSLKIASNKGSLKMQENLAKRTVEGTLISLENETGYITALVGGSKYSASNQMIRAIQGYLQPGSAYKPLLYSAAIDTKRITPATQLEDVPQVFGTTDIPYIPNNYGGRWRGTVLTWRALAQSLNIPAIKILDTIGFDAVINRSAALLGITDRAEIERVFPKVYPLALGVIAIRPVQLARAFAIFGNQGQEVTPIAIRTIEDRSGNIVLDPEKELRIQQRKKGNATQIISPQNAYIMTSMLKKTLTIGTLTASTQSTRKFMYKDANTGRYFTMPVAGKTGTTQNWTDAWSVGYSPYYTALVWFGFDRGGLSLGLNNTGAALAGPPWANFMQAIHEGKPYKDFIRPETGIVSVSVCSKSGKLPSEYCTDAIDTLYFLSGTQPTSYCTYHESSKRLEDLAKERLRKSSYTTGTIPTDINEGGVFLDPRIFEDPTPSTKRKPKNYFNEFDEEIEDEDSLPIFEDMEEPEIENTPSEIESNINNIPPIGVEQTLMNDKEKEPPAADTQDDKKKKSTETSGDNQNPWL
>NZ_CP054692.1|WP_002698549.1|1406263_1406872_+|LemA-family-protein
MTKGLKTTLIVVGVIVVIGFMLYNFFVGNYNSMVTQEEGVKSAWSQVENVYQRRLDLIPNLVSTVKGYAKHEQDTFTKLAEARSQAGGVIKIDEDMLDDPEKFAKFQKAQNQLGSSLQRLLAVAENYPELKANQNFLDLQSQLEGTENRIAVERKRYNEVVQQYNGFIRVFPKSFIANMFGFRPKAYFQADEEASKAPKVEF
>NZ_CP054692.1|WP_174897057.1|1406897_1407773_+|TPM-domain-containing-protein
MQAKSPANLLPAKTKSKFGEENMKKRISVIFLSFLCLVAIALEVPPLKEPVTDLAGILSETEHKEISDFLLKTDSSSALQIAVLIIPSLKGEVLEDYSIRVAKEWKIGQKGKDSGVILLVSKNDRKIRIEVGYGLEGSITDAKAASIIRNVIAPQFKKEKYGEGIYQAVQNIAGLALEDESLISDTLKTEDDYDTLGIVSIILYIIAFFMALPILAVPFVIVIMMLRIIWWTTCLILGIEYKPLFPKFMNSSSGGSYSGSSYSSSSYSSSSSSSYSGGGGSLGGGGASGGW
>NZ_CP054692.1|WP_174897058.1|1408078_1408855_+|YgcG-family-protein
MKKRIAFFIFFVLCFIATALEVPPLKEPVTDLAGVLDTAEHTKISDFLTKLDTSSQVQIAVLIIPSLEGESLEDYSMQVAEKWKIGQKGKDSGVILLIANDEHKIRIEVGYGLEGFITDAKASSIIRNVIAPEFKKNNYGEGIYQAVQNLAGLALEDESLISDKLNTEEDSDGTPWLLIIIIVAVFLLVGGLQGKRRSGSPSFGRGFSSGIGGGFSGDSGNFGGGGGFSSGGGSSFSGGSSFSGGGGSFGGGGASGGW
>NZ_CP054692.1|WP_052335789.1|1409266_1409758_+|TPM-domain-containing-protein
MKKKIAVFVFFLLCFIAAALEVPPLKWPVTDTAGILTKDEHEKIYAFLRKTEANSSLQIAVLIIPALQGEVLENYSMRVAEKWKIGKKGKDSGVILLVSKNDRKIRIEVGYGLEGFITDAKASSIIRNVIAPQFRKEKYGEGIYQAVENIAGLALQDEALFQA
>NZ_CP054692.1|WP_052335790.1|1409757_1410078_+|hypothetical-protein
MNVEPAGKSSLTEIIFAIIFGVCAPIAVFILILRKILLGIDKYLAKKYPSTAGLSTEGRHYSSSSYSSSSYSSSSSSRSSYSSSSSSSSYSGGGGSFGGGGASGGW
>NZ_CP054692.1|WP_024753472.1|1410163_1411051_+|hypothetical-protein
MKGKTKFFITLIILVGVSSAVFIAGWLQFSVPAGKYGILLSRSSGYYQKVIMPGQFLWRWERLIPTNAKVLIFDLQRQNILTTVTDTLPSAAQYQAILEKKADFSWKITVSSDVRLKPEKLLNVIEHENITDQAGLDSYIRTKIEALQRQAAYSLISSYLENNEMYEAMKTQYGKISHQIKKEITSDILEIESVWVQDITIPDMALYKSVVNTYNIYEQKRSELLAELAAENAKHAANEELQLQRMTKWGEFLKRYPSIIEFLAVARDDAQSTLNTLKSVQNTDQKNNQDSKNTP
>NZ_CP054692.1|WP_024753473.1|1411301_1412339_+|aminotransferase-class-V-fold-PLP-dependent-enzyme
MIYFNCDYNEGGHPKILERLCETNLEQTAGYGKDDYCEKARKLIQKAMGREDADVHFLVSGTPTNVACLSHMLRRYQAVIAADSSHINVHETGMPESRGHKILEFENRNGKIELAQVEEFMQAREFEGKFEHAVMPKVVFITFPTETGTIYSKKELEELYQYCKAHELYLYIDGARLGYGLTAEGNDLSFQDVANNCDMFCIGGTKCGALLGEAVVILNDELKKDFRYTLKQGGQMLAKGRILGINFEVLFTDGLYFDICKHANEQAIRIRDTLKEKGIEFLVDSPTNQQFPIIPNSFFKATKNEFAFEIIKNVAGDKTAVRICTSWATKDENVDALIKRIEELL
>NZ_CP054692.1|WP_024753474.1|1412407_1413643_+|hypothetical-protein
MKQSIAAFFLAFCFFSLFAKEAEQFTAKEYFEDLEKNTFSLDFTDKKIIDKVFALDNLKKHKAILIGEIHGVAANYTLKSEFLEYFTKAGYCNTLLEEAPVSHNLFLNKYLETGDEKILKTLFTIMRGTAYCTQEHYDFFKKLYQYNQTAPKKQRIRILAVDVEHQPILAYAAQHALLKEKKNLRLFSDLQSKLAAAAKKAQFPNNDPYAIAEECEKLLQENQKEAKNVLGKDYTLFALINRNILSRKKLDSCPPEQFNTIRDKQLYENFCALDLPKNTYFGVWGNLHVFQVPIDQVTYFAGHLTQNKNYSGKITSIAIQYIKSEFSNKDDNYLPYPCENRMLYFDDAYQQQLETDKGDIYIFRLNTKDSLFRRTDLNFQKADKGDPVISDVYQYLITVKNSPACKKYSGD
>NZ_CP054692.1|WP_024753475.1|1413913_1415200_+|arsenic-transporter
MIETQLIVSAVLFCGTYVLMIVLTNYRPVIACVSAAIFVVLGILPYTQVFAAIDWNVILMIAGTMGLVSLFTESQMPQRIADNIINRLPNVKWIIVCLSLFAGFISAFVDNVATVLMLAPIGIVLSKKLNMSPVKPIIAISISANLQGAATLVGDTTSILLGSHLNMNFFDFFWYLGRPSLFFIVEFTAIAATGIIYFIFRTSKETPEKVALTEVKDFFPSVLLVMMIILMIGASFLPEDKKPQTINGLICVGLFLIGILYTILRKRNYSILTVIKKEFSFETIFLLIGLFIVIAAITEAGLIRAIANVFLKLGTNVFLIYSVIVWGSVVISAFVDNIPYVATMLPIVQILSESLGVSSPILFFGLLSGATLGGNITPIGSSANIASLGILRNEGYQVKNTEFMGMAVPYTLTAVAIGYGLIWMTYGV
>NZ_CP054692.1|WP_174897301.1|1415262_1416450_-|tRNA-4-thiouridine(8)-synthase-ThiI
MMNENLLYLAKIGEINLKKGNLKNFERRLAQNLSLYLENTGASVRVRAGRLFLEIPSEFRTLAEKSLDMLIGITGWAEAKVAEKNIDSIAAVLIKEAKEAVRLGCKTFKIEARRSDKSFPFTSYEIGRETGAQIHMAGILTVDVHNPDIVLSVEVREKSVFVYGVEHTGRRGLPCGVSGRGLLLLSGGIDSPVAGYRMLFRGMKLDFLYFHSHPYTSPEAQQKVETLAEKLAEYGLGAYLNIVSFTKVQQQIKKTAPEAYLTLMMRMCMMKTAERIAKKVNAQCLITGESLAQVASQTVENLSVTNSCIDFPVFRPLIGMDKEEITALAIKIGTYETSILPYEDCCVLFSPKHPVLHTRLEDAFEIYNRMGIEPFLDEAFESCETKKIIGYGKKK

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Crispr_ID: NZ_CP054692_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_7

1743055-1743140

Orphan

Consensus_repeat	Method
TAAGCGGCTTAACAAGTTTGAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_7

>merge|NZ_CP054692|7|1743055-1743140|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAAGAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCGTAAGCGGCTTAACAAGTTTGCAA

>NZ_CP054692|7|7|1743055-1743140|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAA	GAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCG
TAAGCGGCTTAACAAGTTTGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_174897095.1\|1751353_1753036_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226810
NZ_CP054692.1\|WP_024751636.1\|1748233_1749013_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153
NZ_CP054692.1\|WP_174897097.1\|1755047_1755473_+\|antA/AntB-antirepressor-family-protein	unknown	unknown	gnl\|CDD\|369825
NZ_CP054692.1\|WP_002696987.1\|1740517_1741534_+\|YqaJ-viral-recombinase-family-protein	unknown	unknown	gnl\|CDD\|227668
NZ_CP054692.1\|WP_002696692.1\|1745365_1746169_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897094.1\|1750534_1751332_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634969.1\|1739430_1739814_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897093.1\|1747170_1748220_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227596
NZ_CP054692.1\|WP_174897096.1\|1753068_1754610_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752413.1\|1729909_1731064_+\|galactokinase	unknown	unknown	gnl\|CDD\|223231
NZ_CP054692.1\|WP_044634971.1\|1741549_1742830_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|213207
NZ_CP054692.1\|WP_044634970.1\|1739946_1740333_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752416.1\|1734683_1735721_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751710.1\|1754641_1754953_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752417.1\|1737387_1738605_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|223810
NZ_CP054692.1\|WP_002700450.1\|1731060_1731801_+\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|223570
NZ_CP054692.1\|WP_024752414.1\|1731811_1732498_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP054692.1\|WP_002697435.1\|1750346_1750538_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752415.1\|1732494_1734552_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|271320
NZ_CP054692.1\|WP_024751741.1\|1744387_1745350_+\|recombinase-RecT	unknown	unknown	gnl\|CDD\|236628

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_174897097.1\|1755047_1755473_+\|antA/AntB-antirepressor-family-protein	gnl\|CDD\|369825	pfam08346, AntA, AntA/AntB antirepressor. In E. coli the two proteins AntA and AntB have 62% amino acid identities near their N termini. AntA appears to be encoded by a truncated and divergent copy of AntB. The two proteins are homologous to putative antirepressors found in numerous bacteriophages, such as the hypothetical antirepressor protein encoded by the gene LO142 of the bacteriophage 933W.	1.28501e-25
NZ_CP054692.1\|WP_002696987.1\|1740517_1741534_+\|YqaJ-viral-recombinase-family-protein	gnl\|CDD\|227668	COG5377, COG5377, Phage-related protein, predicted endonuclease [DNA replication, recombination, and repair].	5.95391e-31
NZ_CP054692.1\|WP_174897093.1\|1747170_1748220_+\|hypothetical-protein	gnl\|CDD\|227596	COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only].	0.00259232
NZ_CP054692.1\|WP_024752415.1\|1732494_1734552_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	4.84641e-36
NZ_CP054692.1\|WP_024752413.1\|1729909_1731064_+\|galactokinase	gnl\|CDD\|223231	COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism].	2.71053e-131
NZ_CP054692.1\|WP_044634971.1\|1741549_1742830_+\|AAA-family-ATPase	gnl\|CDD\|213207	cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50. The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.	9.92236e-06
NZ_CP054692.1\|WP_024751741.1\|1744387_1745350_+\|recombinase-RecT	gnl\|CDD\|236628	PRK09846, recT, recombination protein RecT.	1.9468e-74
NZ_CP054692.1\|WP_002700450.1\|1731060_1731801_+\|5'/3'-nucleotidase-SurE	gnl\|CDD\|223570	COG0496, SurE, Predicted acid phosphatase [General function prediction only].	3.42835e-63
NZ_CP054692.1\|WP_024752417.1\|1737387_1738605_-\|M23-family-metallopeptidase	gnl\|CDD\|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	6.40786e-50
NZ_CP054692.1\|WP_174897095.1\|1751353_1753036_+\|hypothetical-protein	gnl\|CDD\|226810	COG4373, COG4373, Mu-like prophage FluMu protein gp28 [General function prediction only].	9.39337e-32
NZ_CP054692.1\|WP_024752414.1\|1731811_1732498_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.87037e-11
NZ_CP054692.1\|WP_024751636.1\|1748233_1749013_+\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.48504e-17

>NZ_CP054692.1|WP_044634971.1|1741549_1742830_+|AAA-family-ATPase
MLLKNIEIRNVRKIKQAEIEFHGAGVQVIQGLNKSGKTTIAQSIALTLGGSKDFVPGMISVGEEQAEIIAYTDDELKIRTLIGEKVTQDVSRLDELTGRYAKVSGGVRAFLDSIRSGLEMPFAIKDWTDESIIELLKERTGTSEKIALIDEELKRLEEARTQTGRDKKRLGTPTPVPKVEHAKPIDELQAEKEKAQNFLSTLKNAFSNINQEMHTLNIESESDIDAAIQRLELAKENLHKWLSKNHKQYSKEDIAEIDAAILEWNKNETAANAYDAYIAACDEIKKLEDEYNGLTKKIEAKRQERKDTLASMDLGVSGLEINEDNQLVHNGAIRGITKTNTIGNWSTAQSIQVFFSLGVRFSGEMKVMVVDNAESLDEAHTAIISEWAEKSGFLVIMLKVGDVPEELEEGIIYLKNGEVVANEYRI
>NZ_CP054692.1|WP_002696987.1|1740517_1741534_+|YqaJ-viral-recombinase-family-protein
MENLVKQLLGKDTNYVFTKSMAKDEWRNARRSSIGGSDAGAIMGLNKWASPLTVYLDKKGLHSFEGNMFTERGSWLEDPIRQRCREEFGVLIEEVPYMFYSGEQKFMSANIDGLIYVQEPKTISGIEVSGLGGHEIKTSQRGDGFGENEIPDSYFAQVQHYMSVLNLDWFVLSAYIIDKNELRHYAINRDEAFITRLVKAEKTFWEDFIEENIMPAPSGVDAEDEAIAKMFEGAENTIILDGEAESMSAEYLLINAQIKELEEKKSKLSSSLKLKIIEQQTNSEEKKAKAVAGKYNLSFSKSIRRTVDSEKLKKDGLYEQYLKESEVAMLRITEPKAK
>NZ_CP054692.1|WP_044634970.1|1739946_1740333_+|hypothetical-protein
MSEPITKVSETISFEDDCTFGNVETKLSNGWTVTQKFSWSFDSYYEPEIDYQCEDVGDLSIFDKNMEPYSNELTSEEEKALARLCIKDADELTDAVYQQTDWKSLAEEVREYNKNPYSYYGVTPLDFI
>NZ_CP054692.1|WP_044634969.1|1739430_1739814_+|hypothetical-protein
MNIEEIKKLSLNRRKTIAKSEKTPQNILLSLAASDPHRYVRGAVAENINVTADILEILLEDDDLYVRNKARERLGLFKLRLSEEREKTIEEKAEDIEDECDCLADFEARKKEQERWAKGAEICIPFK
>NZ_CP054692.1|WP_024752417.1|1737387_1738605_-|M23-family-metallopeptidase
MDIITYPQTDIDLEPYVDTSTDYFFSDKTEEHTRKKTKTFDFDSLNYDSNSDFFSFNPDLEQKKHSFHLHTKRRETRAAILATQEPIFFSPKIRSQYLMVSFILALVCTIIIFSLPTFDFLLGMYRLANIRFADDPAISKILHTNAFPEEEAKNTSQALADALPIVSYNTYTVKRGDTISGITVRYGLKNMSSILSVNNISNARRLLVGETIKVPSMDGIMHTVKTGESLQSIAGNFNIPVTALLDANDLSSQILNIGQQLFIPGAALSMFDLRKALGELFVYPIFGRLTSGFGYRTDPFTGAKSFHNGIDLAAPQGSAVKSSLDGRVAEIGFSRVYGNYIILTHSGGYQTMYGHLSAVLVRRGTYVTQGTKIGQVGNTGRSTGPHLHFSVFKNGRVLNPFTVLK
>NZ_CP054692.1|WP_024752416.1|1734683_1735721_+|hypothetical-protein
MKKRFCVLLFLFIPLFFYSENLSGIWENGSKIIEFAAQENADSAQPLNDENRSFNMRMVLKPYYAFVFEPLKTVSATVKNRFDISELYYLGIEYPRERHRVQIPVCIFQDALFTSFFQRMPYYTHREEIPEEAIPVGITAEQEAEIRGEHKSLLFGFWVEEGTPDGILLYPNEIPQHITAYFFTEKGYIAFRYWKDDLEYRQSSSSFTADDEQVYEIPQYLQRGEAVYTCTTGRGRQLRNYQQGTYTITGDKTQGLTLNLKPEKAGPGTHAVWNLYPNSKYPEITDLPLYITETGQIFSYGAPFLMRSKITDLDSEVTKHNALRRPSREPLLLPDKVDFFDSEHN
>NZ_CP054692.1|WP_024752415.1|1732494_1734552_+|tetratricopeptide-repeat-protein
MKHGILKNIFLFFLFFCFTGVNLRAQTNSLQPKITTADTALGSEEFRRGVQAYYRGAFNDAIRLLEKALSYIPENPLILEWLGNAYYRSGVEGSALQHWEHAEETEFGSILLKNKIEIVKERRNMLPDFPDMLTFSESISFSALNDGNYLFRRPASIVSMPDGSFWLTAYGSNELIRFDVNGVILTRTKGPIQGFDRPFDVIRMHNGDLLVSEFAADRISRLTKDGKFISSFGTKGRGNGEFIGPQFLAVDNYDNIYVTDFGNARIVVFSPDGKALFTFGNKDGIFPGFIAPAGIAIINGLLYAADAVKGCIYTFDTAGNYIGTLLPDDSLKYIESMRVWKNNLLVSSLSTVSLIDISLASIYRIASLGAAPSRIIGVAPDANGNIVLADYKNEKIEIVSHITELAGGLFVTIERVYSDRFPKVTVNLRVQNRNGTPVVGLNDSNFLITEENHPVNDLKLEGSAYLNDNCDICILVDQAPSSDEEKKLIQSAIKEIAKAMGEKGQIHIVSASNIPVLEGKFSPSQLVSEDFHFKAGQSAHRKFDLGLRLAATELINAEQKRAVIFLSSDNTFAHSFDRYGINDLTAYLNNNMIKFYAVSLKKQASSTELNYLAAKTGGKTAYIYAERGIAPLIQDLLEAPIGTYMLSYTSILPTDFGRAYLPIEAEVHILSRSGKDKTGYFAPLE
>NZ_CP054692.1|WP_024752414.1|1731811_1732498_+|tetratricopeptide-repeat-protein
MSALAEGIALYKKGRYTDALTELLQITSTSSETNIDLAYYIGLCYARLDRFDDALIYLEQIVTGNADIARVYQCRLILSYIYTKTDRTRLAEFELSKLIQAGYESVQVYASLGFLAYEHGETDKAVQYYQKALDMQEENATALNGLGYILADSGRELTRSLSLCKEAVEQKPDNGAYLDSLAWVYHKLGFSLEARTYIKRAAEKLPNNKLVQKHKTIIMTEHKEDWQK
>NZ_CP054692.1|WP_002700450.1|1731060_1731801_+|5'/3'-nucleotidase-SurE
MKILLTNDDGYGSAGIQTLFELLEGKHEVVMIAPHIDRSAISHAITMNDPIEFIKKEKNMYTCSGTPVDCVAAGIMSIFNGEKPDLVLSGINCGGNLGTDIVFSGTVAAARQAVMHAIPGIAVSLMQSDNGDYNFDALANFVLQNLDTLAKMSYFDVLVNINAKSAPSYSHASFASISRRIFKSKGEIITHAEGKKQFLYGGGTIETENDGTSDWDIVMNGGISVSQVYAQPVLDKKTSESPIFKF
>NZ_CP054692.1|WP_024752413.1|1729909_1731064_+|galactokinase
MQKIVPFHIDEYGDEPEAVAIVPGRFHLLGEHTWFAQGNTLSMAINHYLYLCVSKRTDSNFRLFSLSLKERKKISASNLRYRKEDRWANSVKAVILSFIDSGYPVTGLNFTILSEIPADAGLGTPNALKVATALALRKLFASKLSKEALLDILEHANVQHLKTYPHRADILCALFAKRGHCVRTDHRKKTADLYPFPLEGKTIILTDSRIPRLLAREELGNRLQQCIEAYELVKKNPDIPKNMTKLTETMLDEVEIPESVRRRVIYIIRESLSVDDAVDALQKGDDLVFSRIVNRSHEGLRDRFEISCPELDWLVKRALEFVEQESSDMICSRLTGRGFGGCTYSILKTEDVETYIEKLNDYERIFGFKPLYYRVKPSGGARII
>NZ_CP054692.1|WP_024751741.1|1744387_1745350_+|recombinase-RecT
MNVNNTNKNQVTAKTKGGDLRSMIMANMDMFKMALPKAITPERMTRIAMTAVTRNPKLALCNQNSFFGALLTAAQLGLEVNTPLGQAYLLPYDSKNGLQCQFQLGYQGMLELAYRSGQFKRIKAVVVHEGDEFTYSYGLNAILEHTPSGNGNPTHVYALYELTNGGVDFEVWTWEKVMQHGMTFSKSFGNGPWQTAPEEMAKKTVLKALLKYAPKAVELAEAANLDEGIIDKKLVRNDGIAEIVTNIEYTEPVQQQTAVQYAEQDPVNANGKTRSSERQKSGAAAQMSKEQQMANEDEQAIEKFELQQNAMFDIAPEFPM
>NZ_CP054692.1|WP_002696692.1|1745365_1746169_+|hypothetical-protein
MKVTGQYLARKVYSNNVHFVMLKIDDKKQADLLDTLFKRKAERDARAGHESLLNVSFNLQYREKSYKQLRTVFALVTAIFISMDGRLPTEEEKYALYLDLLDVYALKTPSKIKPDTLRTIHLSESNTFEAAHFINGLMLHLATECDLDLDLQSDVKNLLWEWELHRGGEEKDPLDYYDTECTQLISEADWRELHQYSEASGLHEAIHLHHIVTRGANAAAIDKAWNWCALTSDEHEQLHHYGEKAFLKKYPHLEGKFKRAHRMAGKL
>NZ_CP054692.1|WP_174897093.1|1747170_1748220_+|hypothetical-protein
MKSNFKSCIFSETTKKQIDAMTDINMKLRFYEAVTNYGIYGIDPDFEGIDLLIWIPMKDIIDNATNKRGAPVGNANAKKANNKTSDSDTEQEKQIKYNETKKLPENIESNSEQKKQMDLIENKENNSKQEKQIKQLNSIKTNKTIRPNDNDNDNDNDNDNDNVNDNVNHPPPEDTAGQDIYTCSDKQEDEEVFSDFSENENLTQLAKDIYGVFVEAGINKPNTFLLFLQRDFQLGLDKLREQAIPVTPDILAACKNYAKVLALKKQQATWWNFTGGFDGFCGKNIILKFLPERFTLTQFEKNNRSPQAEKDYSKQDFSQSSIDEFFGKPQPPPQVVSADVGDELEGVMF
>NZ_CP054692.1|WP_024751636.1|1748233_1749013_+|ATP-binding-protein
MRVLKQGKWQQVNITQSFLPDYLRQSKALCKTHGEYKCLIDTRTNEASPCPLCEQDRERAELETQKELEQFEARLKKIDGLPKRYRNAGFKNFVVDEKNKTARDSVLSFAKNPNNKWLLLLGKNGTGKTHLAHAVLKLTGGIFRDFDDVSTDLLDAQAGYGAGLNKTLDKYANAPMLVIDEIDKVKNTEGRITWLNTILRRRYNEMLPVVLVGNIDLERLCQIIDLHGGEAMRDRIKELGIVVNFNFESYRPVLRNEKE
>NZ_CP054692.1|WP_002697435.1|1750346_1750538_+|hypothetical-protein
MIVCPSCKKPVKYIASKDNTILIVNVELKTLVNERGRFIQGYELHECPSEVAAKTIPTAEAQA
>NZ_CP054692.1|WP_174897094.1|1750534_1751332_+|hypothetical-protein
MKKEKETPPEKKPKEKLKKTTAAKTSAAKKSVKKEASLSKNDVLISMETFDVGDAKLTEKEKRFVFWYTYPGSDAFMVQARAAELAGYKSPTSEGYRLRKKDTVAKAIRYVLDTNIKKDLDEEYYKILELKKRRIHYDLADYVKKEQKTIITKEGIEKIIEIEELKDLQDLTPQQRQVIDGLDLKGGNNTWVYIFADRDKAMADIIRIREKLFEREQGDEGDNIEFVAEIIKEGLALKVSARNKKRAISESADFLELSNEGSEEL
>NZ_CP054692.1|WP_174897095.1|1751353_1753036_+|hypothetical-protein
MPIFAYIFAVFYPLFSVLCRTIAGGGGIKMGALFTPDERLNYTDAFIKVDEKPIDLDFWQERFLMDAQRHSIVLKSRRTGFSFITALKGLVKAMDGNRTKYVRQFVSYNEEDAKEKIQYAQEFYASIHPKAKKKLRSCTKTAMEFYDKSGKTVSRLISIACRPPRGRGGDIVFDEMAIYPENKAEVIYTAGIPVTARGGCVEIGSTPLGKIGRFYDVFIDKKKYRTYNRYTIPWWFSAALCTNVEEAVRNAPAMDTEERVYRYGTPPLIEAFEAMLLEDFQQEFECTFIDSALSFITLDLIYANTPGMRAEDRTEEIRGGNIEDADIEDEKDLEIKIFRTSDELCAGYSREEHGALYLGYDVARYRDAAVIYVLGVVDGKKKCVAEIEMKNKKFEYQRDEIRKIMRQLPVVRGCIDRTGQGLDTTETLQKEFGESKLEGIDFTTPAKEVLAMGVRTGLEKREFLLPNDQKFRKQIHSIKRIPSAGGSFRYDSTRDKDGHADSFWAFALANHAIIGNTAQATTGFYQQVKQRNEAGKKETKKSSSRRTRGKTLAQIDKKIK
>NZ_CP054692.1|WP_174897096.1|1753068_1754610_+|hypothetical-protein
MRKQNKKNKRKDKIKKAVNTGLASNEVQVVEKAVAPNQIKTEEIDVDKMVRKQVARRTAFSQQSALFGTVDKQKGLQSLFYDPLQMNTNAWGRVRTLSPYYGRQISYRILRRVSEKAWVLNLCISNLIRKVRPFLKVSTDENTRGFRIIAKSAKDKKEGMNEREWKTAEVLADFMLKTGDIQDNNREDDLDAYASKIIRDICQLDQISTELQRTRSGELGAFWAVDPATIEMSLPQSEEETGIKYVQVINNIPYAFYSRSDFIFTCMNPRTDVERSGYGYSIVEQAIDLITSSINTFMFNAGFFVENKLPRGMLLLNGDADLGLHSQKSAPLIGADVSPKLEASKSLVLGDMLSFLQKHLNKILQEKNPDYEFEFVGYEKSDSRLVLEIDRSEVETFKTIDEKRIEKGLEPFNESWSTVPLNPQVVQILQSEKQQDAGGMFGGMGGIIDDEEHNEGDDEQNEGDNDGQQANSEIEQAEQDAPHGGDKNNNENKQWNNLSKSFGIKREAIRIAI
>NZ_CP054692.1|WP_024751710.1|1754641_1754953_+|hypothetical-protein
MKITRIFILIVGLVLAGVLFMNYGQTVPIDCVGAAIVLTGGGLAVYDSVKAKRKAALIPLAVGLITLIITGFIQFNGVIVVAAFGFIALGIYLYLRFHNQKKN
>NZ_CP054692.1|WP_174897097.1|1755047_1755473_+|antA/AntB-antirepressor-family-protein
MNEITKNKTTTTSVPPNLTFQSKVENAGTEFEQNEILKIDTVENRQYVNARELHMQLQVGKIFAAWIKERIEKYSLIEGKDYKTCFPNQESEIHGGQNKKDYLLTVQAAKELAMVENNEQGRKIRQYLIKVEEAWNTPEIK

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Crispr_ID: NZ_CP054692_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_8

1789459-1789545

Orphan

Consensus_repeat	Method
ACAATCAGCTAACCACATTAAACG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_8

>merge|NZ_CP054692|8|1789459-1789545|CRISPRCasFinder
ACAATCAGCTAACCACATTAAACGCAAGCGGTTGTACAAGCCTGCAATGGCTGTACTGCTTCCACAATCAGCTAACCGCATTAAACG

>NZ_CP054692|8|8|1789459-1789545|CRISPRCasFinder
ACAATCAGCTAACCACATTAAACG	CAAGCGGTTGTACAAGCCTGCAATGGCTGTACTGCTTCC
ACAATCAGCTAACCGCATTAAACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_174897110.1\|1786005_1786998_+\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP054692.1\|WP_024751702.1\|1796421_1796898_-\|protein-export-chaperone-SecB	unknown	unknown	gnl\|CDD\|224863
NZ_CP054692.1\|WP_024751706.1\|1798501_1798939_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897107.1\|1780953_1782063_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751704.1\|1797270_1797660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897115.1\|1795502_1796384_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237177
NZ_CP054692.1\|WP_174897108.1\|1783535_1783775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751724.1\|1778308_1779451_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374348
NZ_CP054692.1\|WP_174897106.1\|1780270_1780957_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897114.1\|1792857_1795431_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP054692.1\|WP_044634573.1\|1791369_1792566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897113.1\|1789799_1791368_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376217
NZ_CP054692.1\|WP_044634575.1\|1784301_1785978_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897109.1\|1783725_1784298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751723.1\|1779443_1780250_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751707.1\|1798898_1799264_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002695630.1\|1782059_1783529_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751705.1\|1797989_1798499_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238651
NZ_CP054692.1\|WP_174897111.1\|1787183_1789097_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274303
NZ_CP054692.1\|WP_024751703.1\|1796876_1797254_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_174897114.1\|1792857_1795431_+\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.000649788
NZ_CP054692.1\|WP_024751702.1\|1796421_1796898_-\|protein-export-chaperone-SecB	gnl\|CDD\|224863	COG1952, SecB, Preprotein translocase subunit SecB [Intracellular trafficking and secretion].	1.93422e-05
NZ_CP054692.1\|WP_174897113.1\|1789799_1791368_+\|hypothetical-protein	gnl\|CDD\|376217	pfam18798, LPD3, Large polyvalent protein-associated domain 3. This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages.	2.34484e-11
NZ_CP054692.1\|WP_174897110.1\|1786005_1786998_+\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.41926e-16
NZ_CP054692.1\|WP_174897115.1\|1795502_1796384_+\|hypothetical-protein	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0.00500619
NZ_CP054692.1\|WP_024751724.1\|1778308_1779451_+\|hypothetical-protein	gnl\|CDD\|374348	pfam16075, DUF4815, Domain of unknown function (DUF4815).	0.00134734
NZ_CP054692.1\|WP_024751705.1\|1797989_1798499_+\|hypothetical-protein	gnl\|CDD\|238651	cd01341, ADP_ribosyl, ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. Poly(ADP-ribose) polymerases (PARPS 1-3, VPARP, tankyrase) catalyze the addition of up to 100 ADP_ribose units from NAD+. PARPs 1 and 2 are localized in the nucleaus, bind DNA, and are activated by DNA damage. VPARP is part of the vault ribonucleoprotein complex. Tankyrases regulates telomere length in part through poy(ADP_ribosylation) of telomere repeat binding factor 1 (TRF1). Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active.	0.00133365
NZ_CP054692.1\|WP_174897111.1\|1787183_1789097_+\|hypothetical-protein	gnl\|CDD\|274303	TIGR02794, Protein_TolA, TolA protein. TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	1.52358e-08

>NZ_CP054692.1|WP_174897111.1|1787183_1789097_+|hypothetical-protein
MTIQDFFSTVKTNPFEIVKASDMDVGFQSIVDNASFLARLAVQAEHDFIIGGQVTPIKDSLSVRVSPFIAFNKKTQRLLCKGTETIVELKAAHATKNRRDVLFITEKGWVDFKKENRARWFVARGNAGQTGQENSGFAKVEPLNKRQAFKVALAVISGENNSGTAKYCDEECVKLGEISVKASQTKFGKEDIFAVSALAENEENAGWTNETMRTFSLAPMSKAAMRFFKIHKPDGTLKDGVVGKSNLALSGGDMLTGDDIVIGKKIAVKAGSINPATGAFEYTIPFVGTERLEFTIFESAKIKEVFDVVFNAFAYVWKTFIANDAAVYRYAQGYTDLGIADLNKVFFEALQKEIQERIAAIDKEAKERKEADAAIKTFAEEAIAQEAQERKEADEKETKERKEADAEIKTFAEKAIAQEAKERKEADEKETKERKEADEALKTFAEEAITQEAQERKEADEIEATARIAGDKQIKELAEEAISLSVPEGSTLGIYDDEEHKTFLKLDGKSFEPAEYPRFYEYWKEHLAFLGEDNEKKPFLPYVETADYSRLGEVVSFIGTDYHHEFLLCDGGPFSPDVYAEFYEQYWKKHLSHLGKDSIGWPLRPKLEGSIAGSNVYIKALPHVEHEFITPVIKTGK
>NZ_CP054692.1|WP_174897110.1|1786005_1786998_+|baseplate-J/gp47-family-protein
MDFDYKIKTFDEIYTEMQLKVFGKILTATDANSGSVLCSLLEATARLIAEAYLHCQIGYAKYLQDLVEGAFGVKRLLGTKAKGKVVFFTEKGKPAASHLYIAVGTEIACGDTVFVTTESGMIDKGTEQSNPIFAEAKEIGEKGNVPSESVDTILSGLHSSIAGVKNIRPFENGTSAETDPELRKRFVNYLRGLQRTNFYGVKEAALSTKAYHVNVVLCAPPKDIPTRDFDGNPITEHNVNCAVYVCDKEGECSGALLDEVRKTLRGDGTYNNPGYTPAGVHLAVAPIVADRRFQGEGNKLNLEIFSVLPDKEEAKERVRKKVIDFFKALK
>NZ_CP054692.1|WP_044634575.1|1784301_1785978_+|hypothetical-protein
MRQGYLREGLWQNVYLIEFYVDNNTSPSESFAFGVPPESEEFVLTQRKTETKTFGGLVIDDYGHDALKITLSGSTVNNELRRMYHTTGASEYVTGEEEIFRLKTLLEKYKGNINTLGKKILLYDLSKHTNRSRRKKTIDSFCWQVYPGEFKIKRTKEKPNVYTYSIEFTAIPAKDTFVFYNTIFGVDFNKAFDAIEQYLQKLEKSLSFFKSVLEKINEARRFAAACKEVALYAISGTINAFRILLDDTFQLGHSAIALYRETVGAEGIPALIFETGDFVAAMLIDFMTNINVLANNIHAMSKKEFYIPAGVFEDWEVTIEELDALSQLQCSGIYNELCALSVSAQMERPKEYTLPVARGAAITTYGMQIGLITDGMSFESIAQNHYGDSSKAYIIASANSAGSIDDLSARGQKNVLIPVLERSASNYQNRIIGLSGQRDNYGVDIALDENGNILLNDLQTDFKFVTGRRNISQAVLMRLRENINKRVMLQLYGIKTTIPDSESAGSAYILSSIIQTLKQESRIKELLSVSFKGDGDALRIDIEYTDIGGQRRSLSELI
>NZ_CP054692.1|WP_174897109.1|1783725_1784298_+|hypothetical-protein
MNLKTGTICREAGTPPENARVFVLMPTGTFEGAFVLCSSLSMFEKEHQKKFMSTKEQRAEKNVERLRVRPGKWIEKYNYKTGQLELTSSNEKVKIAIADDNNKKEVSVNAFGANITIDKDGNIAVKAATDKKISLNGENLSGIVKADELKTQLVPNDGGAALATAMKTVIGTMVKEDFSNIKNDKVVHGD
>NZ_CP054692.1|WP_174897108.1|1783535_1783775_+|hypothetical-protein
MRIVIRERSGQVTGQVPLQNTVPRIGMWGTVTDVDSTRNAVNVRLTGGVLLEDVPVASLDEWICEFKDGDYMSGSRNSA
>NZ_CP054692.1|WP_002695630.1|1782059_1783529_+|hypothetical-protein
MMITIHKSPQPKIEIFDYNAPTVPAFTLSAQTHEYTQLLSYSFTESTMDLKGRFQFSIAGGDNNLFNEIQPLQIVKIYEGANTPVFIGVIANKDLSCTMSQGGVQRQINFSGMSITGLIANFQLILDIKFLSLTQIMSAETINKDMVLRINELQTKEPLKIKKFLELTWDTYLGYVGVRYLKPTADKAPVKGKAGESNKIVYDIIKNFMGNDFFEVGEAESIPVPIANTFFNQGINTVQQIWQTILAPPVYEMFSRVNEKGKTKIVVRELPFSFRENGIVHNRWGKLPIRKIKSPHLVDYSLRLSIDEVYTTFFAYIEGSSLSADQYIVIEQTDGDKIEKKILQVDEKKLKTYGMKMLQVAFRGYKKQTEKTETITNAMHKLSLRLRSWFGRLDEMYTGSIRIINDFSEKQIRCGERVSFLGGEFYVRSCDHSWSYGGTPTISLQVIRGGKYNKGGEFVKVMPEMGTSNIELKFDGEETNSLVDISWAR
>NZ_CP054692.1|WP_174897107.1|1780953_1782063_+|hypothetical-protein
MSMVKHLTQYGLSSGSYDVARNVFGWSRMMGIQKEEAADFKGTFSRYGNKDADSLAQAYRASSFMGMKEGQYSETLGLLQNIFTDGISKGFTKSIAEIGSTMTFLKNASGNNPLWMGEQGASRYQQLNESGRSATSLSSVSDILTYRAIASLSDAEKARILKEHGLESQGGYLDNMQIAELGFLPEIYKKKMGLFEQMSGKGNKAGMIEMIRKDTGFDYIQAAQFYELMNNGEINKDAYESITNASIRPEYTSRVGASTGSAELWRTWTAELGKGPAELTKFLSVFLSGTRQEEFNTGKLPGMGEGSVNNVTLIKELQQRKQDLAFELQTLYNTFFPDQEKIKENTEELKKINAQLELLLNGEIKVESR
>NZ_CP054692.1|WP_174897106.1|1780270_1780957_+|hypothetical-protein
MGMKEVAIKLNLETGSFSSSAQTISDAFDKMLGKMKEAQEVAAQQMQQVYNGMANGNQAGGGGIAGFNNTVGGISNTAQSVIGQIGAGDAAGGGLTLLGKGAGLLGKLGTGGAIAGAGLLAAVGAGWGVKKLSDLYTSHDDAAEALNASLNNTMRTRFDLSTKEGRGEWRQFAKDYPERKNDFEISKDGKTMIETLESRYKVNTKNIEDAFTKQVLPQTVSATQWKTG
>NZ_CP054692.1|WP_024751723.1|1779443_1780250_+|hypothetical-protein
MVKIKITADNPALQELAAAVKKIGRSDILPATDATFQGCAKMVADSWRAYGQGQKDIPGVPPMKKPSSNYSGGVKVKKSAPLEYTISNESKAAPLLEYGTDGYDMKTTHPYGKKSRVSKQKNPKTKMIELIPYLIVPFSWGTPGTVTFQNTMTEDIYAIAERMKKSVVMEETHFEENWAGEAIERHEYTWADRLNENDLGNADGMVRMSDTPTGKSTYWTFRIISAKSPKNSWINKGIPARNVTEGLKALHEKEIADAIQNALATDLG
>NZ_CP054692.1|WP_024751724.1|1778308_1779451_+|hypothetical-protein
MAYGLGKNSPVTLALGKESYEAMIERHGQYVRWRVAKKCPCVSTGNQPDIHCKKCGGSGELYSYQKKYTDNVRLSVFDGLIELPEDIADCVIKSIYNYAGVLFEFKKEDRFIQLQDKEHTLTQGETVDIIFEQELVCILKETKAERICKGFYRVPDLRMPKSTIEGVYYSPCCDILKIENLKSEDGADVEILNYYKDCIEVLSEEDYPYLIAKNIEYIKPVKFIVLSQNLHKENLALIQKHNGDAVCTFPYKFDVSEGDIITIISGTMTNKVIVKRGRETADDIIPEFFVDSIDLIETKTSVFKEGEDFILIGTNRIHWLGAAKPEANESMSITYRYNPTYRVCQNIPSLRTSEDQRIPRKVVLKLFASYQNARRVHTNG
>NZ_CP054692.1|WP_174897113.1|1789799_1791368_+|hypothetical-protein
MRIVTGADVSKQIIHTLKRLSEQQQFHEVLKLMQKTFVEGKHPRDEEGRFASKGGYVRAKRLKLKEKLKDYVGKDIKNEKTGIPAYISNESINKISSEKAIEKTKANGFTVDDHFYAASNIVPLFKKADLRGVYKDKNNSKDIVSIKRFNCRFRLPSGVAANAYITVKEARISGHKIYSLEVMELEKALKNEGLGMAVRKSNATCIPENTPPRTFSIPDSQKKARERETHQTDEQQQFHEILERMQKTFNEAEHPRDEAGRFTDKGPVSKEVHKTRQRLRAVFTDKAVPMPDIPFTRENYNKLFPRNRIDTPLGSVKLGEHQFEKLQALGRNYLLGAVATTLKNPVAIIREERDGRKSNLYVKSFIKDKKNKIVQSVVIDIDGQHISISTHEKDVSNVLNKIETVGQLIYIDSQPDRMAEQHHLSDESVVNPTRKQEKALKSCTTSIPHSKKKARAQNAALPKDFVSRCNMVSIQLMLLKWDIAAIQEETDRRNNMYDLLLKSFNKIVQELKKTQGSKQRRL
>NZ_CP054692.1|WP_044634573.1|1791369_1792566_+|hypothetical-protein
MKKNPIGKRLKEYTASAINTGGEVYEKIMASGKEHAEEQGAIENALCQLFDFIDYYRQPEIFNHQGTHLLKGLNFFSGLKKSRQEPYSSTKHKYKAMMIRVDDDAPLDTVWGTKWNAEHALRYYFNNDDCFVMEFTNEQEKNLLKNQFISDGWQVDGLPVEKSPHLNDQASLVNVNGIRMINNTVLQTAQAVRIAKGIYSLHFFIRGAMRNSKGVWQGKLNLKIVRKDGAAIFTKTYRCGMHWENIQEHLYFEQDGEYDCIFTCEKNVDIDFINLFPEVPYPSLSILIGHGGMRDLFSIFFAPHVADPKDKDDEKNFKDNEFIVFDLLDKYKFWFPFADDSESKRERLRLKIDFNDKHWGYWTEDIRWLDLLYVSALLDSLLPVGVKVFTIISSRRGS
>NZ_CP054692.1|WP_174897114.1|1792857_1795431_+|hypothetical-protein
MAFKGRKVLTTVKVNPYEIAKASDMEFGFRSILDNFSVLLNAIGATHTPLVDEAGFNNSNELKYVGKKEKDFIIGGGLVDAGNKQLRLLPILAFNNKIGLLISDGLDKDNKPIEIEIGSGSGSFILTHKEDYLYRIESVYIGNANTGEETSGTTANIKKSDPIWDEFQTEWRGSYRVGENDTMQVSTFNKRQSQAVRLFVDFGALVPRAADASANIPDERSIWSERVKIAEVLVCFKRNETNWIYEMQPITKDDVRFVTARCYFDWRVQEEVIEKAKAADSVWVQHAKVAKPNQNAQNQKAEEKRIAGINLDNKAWRAEHYNYRWTAEHTRTYRLGSIAEINEQLYKMHKSDGDIKERVIRLDHINLRPEDPNALRAEKIPIDLVGNADIPLPYNKEIKSYDDVKKGLRAIAETLRGDLIPVGPDDGSGNSDISLPHNKKIESKENIKKGLLVIAETLIAADEKTNTVNTTLNRKIDTVNTTLNSKIDGVGKVLTNHINATNVHSATSDPTANRIAMRDGNGRMQVASTDKNSGESIVNVNFLTREWSPDFIMRVLMSKLITNQEEFNTWLSQTNNKAYTYVYLKGTFNRSGTINLALIGTQEVIGLGATIKVGIASRSDSSDFGVGIDGDDTSRIVRNIYLEVTGTINNGTVLGFEQCTCINCTAYVTGENGIDGGDGERGGNGSPGTAGTSAMGYYECIVDRCSAIVYGGDGGRGYGGGHHTFFKGIIPSRLSGDDGEAGYNGGDVYSCYNCTMKSPLVHEYAQAGNGGDGGKGGEGYYDNAGCLGKSGDGGNGGRGGNAHVFNSANGKGGSGGSGGPRGDVFPPKYTEKSYAATKKRKATIEGSAGINGRVVVM
>NZ_CP054692.1|WP_174897115.1|1795502_1796384_+|hypothetical-protein
MKRKIIFLIGLLAFGALIISCDTDGSKKAEKERVEKEKEQQQQQKKEEQEKQDLLDMLIVTGGSKNAMLDGDYFTPEGKRIRFSSPDSTNIAWCSVGYAEYTVDGNTITFDFSRQIKACENINMENYLKALQLLAQKKIEFYEKELNKEGLTDKRKKEMQKDLNDAKQKKEYFSSLDGAVKHVRAQEKESLDYFKKRLEKETNETEKQALQKRIDEITAKLAQTDEQLKADFSKEMEEGSQHNKRLAAALKTVNPVTGTLSADKQTITIKKMVTDVKEDGAPVYVENAVFTKK
>NZ_CP054692.1|WP_024751702.1|1796421_1796898_-|protein-export-chaperone-SecB
MDQSSSIKSSFQLIDYKIDQINFSLTPETQFLAEDHGNKLFDIEFMFRDPQKFIDNEETYYVNGIQMLLKVLVNEEVMANGTFSISGLFKTTGEFSQDIEQRLVKEQIPAILFPYLRAAVTNILASAGFGSAILPLVNIQKMAGSLNLEIIEKKHDNK
>NZ_CP054692.1|WP_024751703.1|1796876_1797254_-|hypothetical-protein
MSNNKKIIYDIREQLAKEFNIMVELRRLNKYNEYEITIFDKNRYHSKEFASFVFELKKKLWDNNIYGVYFTLSIPQKSIPQKLIVQENLDTCIQHKYKTHEYKTNIPIKQDTYKKGENEWISLAA
>NZ_CP054692.1|WP_024751704.1|1797270_1797660_-|hypothetical-protein
MSFQQKINENERIAQECKKLKAFNVGASRAYYCAFLKAKDYLIANGISKQKYKQMVKNKKERAYSHGSIQKVLYTVKSTKNNKIDWSTLFLCWDNLYKQRIVADYDEQLITEDNFDKILSDLQFVLAIF
>NZ_CP054692.1|WP_024751705.1|1797989_1798499_+|hypothetical-protein
MKITGYHGTSTKNATSILKNGFNASTGIKQWLGDGVYFFGTLKGYSDGIEEARHWALYVKKEKEISVLSAEIESNDFLDLCNCVEHRKLYDKVLKIARALHSASKYKDEDFNDWHVFIRIKENNSIDFIRAFVNAAKDTGHIVRRPQIQICVINKSCIKNMQLVCEERS
>NZ_CP054692.1|WP_024751706.1|1798501_1798939_+|hypothetical-protein
MDAGTKYLKQLRQTFSDMTVEEYEKLYKETMVQTDSFPKILTEGVPLIDEYLKEKEHKALGIVYMYMYQDIKKERINMSEPTLKINEILSSIKENTGRKKTKPSIFQKPVALVKKSMTSLPNDFYKTMKDVYNENTEYLFNTSRI
>NZ_CP054692.1|WP_024751707.1|1798898_1799264_+|hypothetical-protein
MKILNIFLIQAGFSSYGLPKKDLSITKEVATEMKDKEHDKALAVQSIVFTITEDEETLAEMALKYMVIFCDFENESNKELEDSIFKEMQQVYIDKANEFLVPAHLPALYRPHLQDMINSED

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Crispr_ID: NZ_CP054692_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_9

1792619-1792770

Orphan

Consensus_repeat	Method
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_9

>merge|NZ_CP054692|9|1792619-1792770|CRISPRCasFinder
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTTAAAAGCTTCAATTTTATAAAACAGTGTTGATGCTTTTAAACATCGTTTAGAATTGAGCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT

>NZ_CP054692|9|9|1792619-1792770|CRISPRCasFinder
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT	AAAAGCTTCAATTTTATAAAACAGTGTTGATGCTTTTAAACATCGTTTAGAATTGA
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024751702.1\|1796421_1796898_-\|protein-export-chaperone-SecB	unknown	unknown	gnl\|CDD\|224863
NZ_CP054692.1\|WP_174897107.1\|1780953_1782063_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751704.1\|1797270_1797660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897115.1\|1795502_1796384_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237177
NZ_CP054692.1\|WP_174897108.1\|1783535_1783775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751707.1\|1798898_1799264_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634575.1\|1784301_1785978_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751692.1\|1799338_1799875_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|366631
NZ_CP054692.1\|WP_174897114.1\|1792857_1795431_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP054692.1\|WP_044634573.1\|1791369_1792566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897113.1\|1789799_1791368_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376217
NZ_CP054692.1\|WP_174897110.1\|1786005_1786998_+\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP054692.1\|WP_174897116.1\|1799882_1800431_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|366631
NZ_CP054692.1\|WP_174897109.1\|1783725_1784298_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751706.1\|1798501_1798939_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897112.1\|1789121_1789790_+\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275378
NZ_CP054692.1\|WP_002695630.1\|1782059_1783529_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751705.1\|1797989_1798499_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238651
NZ_CP054692.1\|WP_174897111.1\|1787183_1789097_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274303
NZ_CP054692.1\|WP_024751703.1\|1796876_1797254_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_174897114.1\|1792857_1795431_+\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	0.000649788
NZ_CP054692.1\|WP_024751702.1\|1796421_1796898_-\|protein-export-chaperone-SecB	gnl\|CDD\|224863	COG1952, SecB, Preprotein translocase subunit SecB [Intracellular trafficking and secretion].	1.93422e-05
NZ_CP054692.1\|WP_174897113.1\|1789799_1791368_+\|hypothetical-protein	gnl\|CDD\|376217	pfam18798, LPD3, Large polyvalent protein-associated domain 3. This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages.	2.34484e-11
NZ_CP054692.1\|WP_174897110.1\|1786005_1786998_+\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	1.41926e-16
NZ_CP054692.1\|WP_174897115.1\|1795502_1796384_+\|hypothetical-protein	gnl\|CDD\|237177	PRK12704, PRK12704, phosphodiesterase; Provisional.	0.00500619
NZ_CP054692.1\|WP_174897112.1\|1789121_1789790_+\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275378	sd00031, LRR_1, leucine-rich repeats. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	9.45165e-15
NZ_CP054692.1\|WP_024751692.1\|1799338_1799875_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|366631	pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.	2.57851e-07
NZ_CP054692.1\|WP_174897116.1\|1799882_1800431_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|366631	pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.	3.26068e-06
NZ_CP054692.1\|WP_024751705.1\|1797989_1798499_+\|hypothetical-protein	gnl\|CDD\|238651	cd01341, ADP_ribosyl, ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. Poly(ADP-ribose) polymerases (PARPS 1-3, VPARP, tankyrase) catalyze the addition of up to 100 ADP_ribose units from NAD+. PARPs 1 and 2 are localized in the nucleaus, bind DNA, and are activated by DNA damage. VPARP is part of the vault ribonucleoprotein complex. Tankyrases regulates telomere length in part through poy(ADP_ribosylation) of telomere repeat binding factor 1 (TRF1). Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active.	0.00133365
NZ_CP054692.1\|WP_174897111.1\|1787183_1789097_+\|hypothetical-protein	gnl\|CDD\|274303	TIGR02794, Protein_TolA, TolA protein. TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	1.52358e-08

>NZ_CP054692.1|WP_044634573.1|1791369_1792566_+|hypothetical-protein
MKKNPIGKRLKEYTASAINTGGEVYEKIMASGKEHAEEQGAIENALCQLFDFIDYYRQPEIFNHQGTHLLKGLNFFSGLKKSRQEPYSSTKHKYKAMMIRVDDDAPLDTVWGTKWNAEHALRYYFNNDDCFVMEFTNEQEKNLLKNQFISDGWQVDGLPVEKSPHLNDQASLVNVNGIRMINNTVLQTAQAVRIAKGIYSLHFFIRGAMRNSKGVWQGKLNLKIVRKDGAAIFTKTYRCGMHWENIQEHLYFEQDGEYDCIFTCEKNVDIDFINLFPEVPYPSLSILIGHGGMRDLFSIFFAPHVADPKDKDDEKNFKDNEFIVFDLLDKYKFWFPFADDSESKRERLRLKIDFNDKHWGYWTEDIRWLDLLYVSALLDSLLPVGVKVFTIISSRRGS
>NZ_CP054692.1|WP_174897113.1|1789799_1791368_+|hypothetical-protein
MRIVTGADVSKQIIHTLKRLSEQQQFHEVLKLMQKTFVEGKHPRDEEGRFASKGGYVRAKRLKLKEKLKDYVGKDIKNEKTGIPAYISNESINKISSEKAIEKTKANGFTVDDHFYAASNIVPLFKKADLRGVYKDKNNSKDIVSIKRFNCRFRLPSGVAANAYITVKEARISGHKIYSLEVMELEKALKNEGLGMAVRKSNATCIPENTPPRTFSIPDSQKKARERETHQTDEQQQFHEILERMQKTFNEAEHPRDEAGRFTDKGPVSKEVHKTRQRLRAVFTDKAVPMPDIPFTRENYNKLFPRNRIDTPLGSVKLGEHQFEKLQALGRNYLLGAVATTLKNPVAIIREERDGRKSNLYVKSFIKDKKNKIVQSVVIDIDGQHISISTHEKDVSNVLNKIETVGQLIYIDSQPDRMAEQHHLSDESVVNPTRKQEKALKSCTTSIPHSKKKARAQNAALPKDFVSRCNMVSIQLMLLKWDIAAIQEETDRRNNMYDLLLKSFNKIVQELKKTQGSKQRRL
>NZ_CP054692.1|WP_174897112.1|1789121_1789790_+|leucine-rich-repeat-domain-containing-protein
MITINGTEITELKYNGVEIEKALCNGVVVFEKTRENIIRMKTSADSINLRVTTKDGSPCEVWNGAKKIAEMQSGTHQTVSIPSNAEEIIIKGYDIQELYCNGCTSLQWLDCSNNQLTTLNASGCTSLQWLYCFHNQLTALNVSGCTSLQRLDCNNNKLSAEVFKKLFEDFPERKEKDGRVLLYTDGDSKYKDFTQPPELAAAFKAAKAKGWKFYKNNWSTEI
>NZ_CP054692.1|WP_174897111.1|1787183_1789097_+|hypothetical-protein
MTIQDFFSTVKTNPFEIVKASDMDVGFQSIVDNASFLARLAVQAEHDFIIGGQVTPIKDSLSVRVSPFIAFNKKTQRLLCKGTETIVELKAAHATKNRRDVLFITEKGWVDFKKENRARWFVARGNAGQTGQENSGFAKVEPLNKRQAFKVALAVISGENNSGTAKYCDEECVKLGEISVKASQTKFGKEDIFAVSALAENEENAGWTNETMRTFSLAPMSKAAMRFFKIHKPDGTLKDGVVGKSNLALSGGDMLTGDDIVIGKKIAVKAGSINPATGAFEYTIPFVGTERLEFTIFESAKIKEVFDVVFNAFAYVWKTFIANDAAVYRYAQGYTDLGIADLNKVFFEALQKEIQERIAAIDKEAKERKEADAAIKTFAEEAIAQEAQERKEADEKETKERKEADAEIKTFAEKAIAQEAKERKEADEKETKERKEADEALKTFAEEAITQEAQERKEADEIEATARIAGDKQIKELAEEAISLSVPEGSTLGIYDDEEHKTFLKLDGKSFEPAEYPRFYEYWKEHLAFLGEDNEKKPFLPYVETADYSRLGEVVSFIGTDYHHEFLLCDGGPFSPDVYAEFYEQYWKKHLSHLGKDSIGWPLRPKLEGSIAGSNVYIKALPHVEHEFITPVIKTGK
>NZ_CP054692.1|WP_174897110.1|1786005_1786998_+|baseplate-J/gp47-family-protein
MDFDYKIKTFDEIYTEMQLKVFGKILTATDANSGSVLCSLLEATARLIAEAYLHCQIGYAKYLQDLVEGAFGVKRLLGTKAKGKVVFFTEKGKPAASHLYIAVGTEIACGDTVFVTTESGMIDKGTEQSNPIFAEAKEIGEKGNVPSESVDTILSGLHSSIAGVKNIRPFENGTSAETDPELRKRFVNYLRGLQRTNFYGVKEAALSTKAYHVNVVLCAPPKDIPTRDFDGNPITEHNVNCAVYVCDKEGECSGALLDEVRKTLRGDGTYNNPGYTPAGVHLAVAPIVADRRFQGEGNKLNLEIFSVLPDKEEAKERVRKKVIDFFKALK
>NZ_CP054692.1|WP_044634575.1|1784301_1785978_+|hypothetical-protein
MRQGYLREGLWQNVYLIEFYVDNNTSPSESFAFGVPPESEEFVLTQRKTETKTFGGLVIDDYGHDALKITLSGSTVNNELRRMYHTTGASEYVTGEEEIFRLKTLLEKYKGNINTLGKKILLYDLSKHTNRSRRKKTIDSFCWQVYPGEFKIKRTKEKPNVYTYSIEFTAIPAKDTFVFYNTIFGVDFNKAFDAIEQYLQKLEKSLSFFKSVLEKINEARRFAAACKEVALYAISGTINAFRILLDDTFQLGHSAIALYRETVGAEGIPALIFETGDFVAAMLIDFMTNINVLANNIHAMSKKEFYIPAGVFEDWEVTIEELDALSQLQCSGIYNELCALSVSAQMERPKEYTLPVARGAAITTYGMQIGLITDGMSFESIAQNHYGDSSKAYIIASANSAGSIDDLSARGQKNVLIPVLERSASNYQNRIIGLSGQRDNYGVDIALDENGNILLNDLQTDFKFVTGRRNISQAVLMRLRENINKRVMLQLYGIKTTIPDSESAGSAYILSSIIQTLKQESRIKELLSVSFKGDGDALRIDIEYTDIGGQRRSLSELI
>NZ_CP054692.1|WP_174897109.1|1783725_1784298_+|hypothetical-protein
MNLKTGTICREAGTPPENARVFVLMPTGTFEGAFVLCSSLSMFEKEHQKKFMSTKEQRAEKNVERLRVRPGKWIEKYNYKTGQLELTSSNEKVKIAIADDNNKKEVSVNAFGANITIDKDGNIAVKAATDKKISLNGENLSGIVKADELKTQLVPNDGGAALATAMKTVIGTMVKEDFSNIKNDKVVHGD
>NZ_CP054692.1|WP_174897108.1|1783535_1783775_+|hypothetical-protein
MRIVIRERSGQVTGQVPLQNTVPRIGMWGTVTDVDSTRNAVNVRLTGGVLLEDVPVASLDEWICEFKDGDYMSGSRNSA
>NZ_CP054692.1|WP_002695630.1|1782059_1783529_+|hypothetical-protein
MMITIHKSPQPKIEIFDYNAPTVPAFTLSAQTHEYTQLLSYSFTESTMDLKGRFQFSIAGGDNNLFNEIQPLQIVKIYEGANTPVFIGVIANKDLSCTMSQGGVQRQINFSGMSITGLIANFQLILDIKFLSLTQIMSAETINKDMVLRINELQTKEPLKIKKFLELTWDTYLGYVGVRYLKPTADKAPVKGKAGESNKIVYDIIKNFMGNDFFEVGEAESIPVPIANTFFNQGINTVQQIWQTILAPPVYEMFSRVNEKGKTKIVVRELPFSFRENGIVHNRWGKLPIRKIKSPHLVDYSLRLSIDEVYTTFFAYIEGSSLSADQYIVIEQTDGDKIEKKILQVDEKKLKTYGMKMLQVAFRGYKKQTEKTETITNAMHKLSLRLRSWFGRLDEMYTGSIRIINDFSEKQIRCGERVSFLGGEFYVRSCDHSWSYGGTPTISLQVIRGGKYNKGGEFVKVMPEMGTSNIELKFDGEETNSLVDISWAR
>NZ_CP054692.1|WP_174897107.1|1780953_1782063_+|hypothetical-protein
MSMVKHLTQYGLSSGSYDVARNVFGWSRMMGIQKEEAADFKGTFSRYGNKDADSLAQAYRASSFMGMKEGQYSETLGLLQNIFTDGISKGFTKSIAEIGSTMTFLKNASGNNPLWMGEQGASRYQQLNESGRSATSLSSVSDILTYRAIASLSDAEKARILKEHGLESQGGYLDNMQIAELGFLPEIYKKKMGLFEQMSGKGNKAGMIEMIRKDTGFDYIQAAQFYELMNNGEINKDAYESITNASIRPEYTSRVGASTGSAELWRTWTAELGKGPAELTKFLSVFLSGTRQEEFNTGKLPGMGEGSVNNVTLIKELQQRKQDLAFELQTLYNTFFPDQEKIKENTEELKKINAQLELLLNGEIKVESR
>NZ_CP054692.1|WP_174897114.1|1792857_1795431_+|hypothetical-protein
MAFKGRKVLTTVKVNPYEIAKASDMEFGFRSILDNFSVLLNAIGATHTPLVDEAGFNNSNELKYVGKKEKDFIIGGGLVDAGNKQLRLLPILAFNNKIGLLISDGLDKDNKPIEIEIGSGSGSFILTHKEDYLYRIESVYIGNANTGEETSGTTANIKKSDPIWDEFQTEWRGSYRVGENDTMQVSTFNKRQSQAVRLFVDFGALVPRAADASANIPDERSIWSERVKIAEVLVCFKRNETNWIYEMQPITKDDVRFVTARCYFDWRVQEEVIEKAKAADSVWVQHAKVAKPNQNAQNQKAEEKRIAGINLDNKAWRAEHYNYRWTAEHTRTYRLGSIAEINEQLYKMHKSDGDIKERVIRLDHINLRPEDPNALRAEKIPIDLVGNADIPLPYNKEIKSYDDVKKGLRAIAETLRGDLIPVGPDDGSGNSDISLPHNKKIESKENIKKGLLVIAETLIAADEKTNTVNTTLNRKIDTVNTTLNSKIDGVGKVLTNHINATNVHSATSDPTANRIAMRDGNGRMQVASTDKNSGESIVNVNFLTREWSPDFIMRVLMSKLITNQEEFNTWLSQTNNKAYTYVYLKGTFNRSGTINLALIGTQEVIGLGATIKVGIASRSDSSDFGVGIDGDDTSRIVRNIYLEVTGTINNGTVLGFEQCTCINCTAYVTGENGIDGGDGERGGNGSPGTAGTSAMGYYECIVDRCSAIVYGGDGGRGYGGGHHTFFKGIIPSRLSGDDGEAGYNGGDVYSCYNCTMKSPLVHEYAQAGNGGDGGKGGEGYYDNAGCLGKSGDGGNGGRGGNAHVFNSANGKGGSGGSGGPRGDVFPPKYTEKSYAATKKRKATIEGSAGINGRVVVM
>NZ_CP054692.1|WP_174897115.1|1795502_1796384_+|hypothetical-protein
MKRKIIFLIGLLAFGALIISCDTDGSKKAEKERVEKEKEQQQQQKKEEQEKQDLLDMLIVTGGSKNAMLDGDYFTPEGKRIRFSSPDSTNIAWCSVGYAEYTVDGNTITFDFSRQIKACENINMENYLKALQLLAQKKIEFYEKELNKEGLTDKRKKEMQKDLNDAKQKKEYFSSLDGAVKHVRAQEKESLDYFKKRLEKETNETEKQALQKRIDEITAKLAQTDEQLKADFSKEMEEGSQHNKRLAAALKTVNPVTGTLSADKQTITIKKMVTDVKEDGAPVYVENAVFTKK
>NZ_CP054692.1|WP_024751702.1|1796421_1796898_-|protein-export-chaperone-SecB
MDQSSSIKSSFQLIDYKIDQINFSLTPETQFLAEDHGNKLFDIEFMFRDPQKFIDNEETYYVNGIQMLLKVLVNEEVMANGTFSISGLFKTTGEFSQDIEQRLVKEQIPAILFPYLRAAVTNILASAGFGSAILPLVNIQKMAGSLNLEIIEKKHDNK
>NZ_CP054692.1|WP_024751703.1|1796876_1797254_-|hypothetical-protein
MSNNKKIIYDIREQLAKEFNIMVELRRLNKYNEYEITIFDKNRYHSKEFASFVFELKKKLWDNNIYGVYFTLSIPQKSIPQKLIVQENLDTCIQHKYKTHEYKTNIPIKQDTYKKGENEWISLAA
>NZ_CP054692.1|WP_024751704.1|1797270_1797660_-|hypothetical-protein
MSFQQKINENERIAQECKKLKAFNVGASRAYYCAFLKAKDYLIANGISKQKYKQMVKNKKERAYSHGSIQKVLYTVKSTKNNKIDWSTLFLCWDNLYKQRIVADYDEQLITEDNFDKILSDLQFVLAIF
>NZ_CP054692.1|WP_024751705.1|1797989_1798499_+|hypothetical-protein
MKITGYHGTSTKNATSILKNGFNASTGIKQWLGDGVYFFGTLKGYSDGIEEARHWALYVKKEKEISVLSAEIESNDFLDLCNCVEHRKLYDKVLKIARALHSASKYKDEDFNDWHVFIRIKENNSIDFIRAFVNAAKDTGHIVRRPQIQICVINKSCIKNMQLVCEERS
>NZ_CP054692.1|WP_024751706.1|1798501_1798939_+|hypothetical-protein
MDAGTKYLKQLRQTFSDMTVEEYEKLYKETMVQTDSFPKILTEGVPLIDEYLKEKEHKALGIVYMYMYQDIKKERINMSEPTLKINEILSSIKENTGRKKTKPSIFQKPVALVKKSMTSLPNDFYKTMKDVYNENTEYLFNTSRI
>NZ_CP054692.1|WP_024751707.1|1798898_1799264_+|hypothetical-protein
MKILNIFLIQAGFSSYGLPKKDLSITKEVATEMKDKEHDKALAVQSIVFTITEDEETLAEMALKYMVIFCDFENESNKELEDSIFKEMQQVYIDKANEFLVPAHLPALYRPHLQDMINSED
>NZ_CP054692.1|WP_024751692.1|1799338_1799875_-|restriction-endonuclease-subunit-S
MQYKEKMIPLEQKTWSEFSISQLFNVYTGRDIIISKLEKGIYPVVSHTIENNGINFFTKNLENRRLFKHDNTISLADRGNFHSFVQPHNFYIGTRVKALEYTADNLNKDVLMFISQMINKQKVRFSYGFNATDKVENLKIMLPVTIEGKPDYDYMKKYILIQEIKEIYKALQYLHTSY
>NZ_CP054692.1|WP_174897116.1|1799882_1800431_-|restriction-endonuclease-subunit-S
MLETAFDLVGLEDVEWKNFKLGSLFTFERKPSKGLNHLDTDKNRGISYLGATNKNNGVLEFVDPISNLVYRGNCIAFIRNGEGSMGYSVYKKENFMATQDISVGYNENLNQYNGMFITTVADRVRGKYNFGYKRNQSRLENEILTLPADKNGNPHWEYMSKFMQKLEVEKISNFLPYIYIYI

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Crispr_ID: NZ_CP054692_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_10

2131264-2131398

Orphan

Consensus_repeat	Method
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_10

>merge|NZ_CP054692|10|2131264-2131398|CRISPRCasFinder
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCCCTGCTCAATTCCAAACGATGTTTTGCCTGTACTCCAGCGTAAACAGGCAAAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC

>NZ_CP054692|10|10|2131264-2131398|CRISPRCasFinder
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC	CTGCTCAATTCCAAACGATGTTTTGCCTGTACTCCAGCGTAAACAGGCA
AAACTCGTTGGCGAAGTTGCTGTAAATTTTCAAAACTTCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024752453.1\|2120498_2121452_-\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_CP054692.1\|WP_002698949.1\|2131991_2132222_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP054692.1\|WP_024752440.1\|2139059_2140259_+\|ZinT/AdcA-family-metal-binding-protein	unknown	unknown	gnl\|CDD\|370371
NZ_CP054692.1\|WP_024752445.1\|2132218_2135044_+\|ferrous-iron-transport-protein-B	unknown	unknown	gnl\|CDD\|223447
NZ_CP054692.1\|WP_024752444.1\|2135096_2135633_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897160.1\|2137733_2138942_+\|ZinT/AdcA-family-metal-binding-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634998.1\|2126107_2127076_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|223301
NZ_CP054692.1\|WP_024752447.1\|2127408_2130963_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP054692.1\|WP_024752449.1\|2125604_2126108_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP054692.1\|WP_174897159.1\|2137516_2137708_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752454.1\|2118096_2120502_-\|endonuclease-MutS2	unknown	unknown	gnl\|CDD\|234750
NZ_CP054692.1\|WP_002698961.1\|2122749_2123277_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|372644
NZ_CP054692.1\|WP_002698959.1\|2123869_2124286_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_039915057.1\|2131594_2131834_+\|ferrous-iron-transport-protein-A	unknown	unknown	gnl\|CDD\|377199
NZ_CP054692.1\|WP_052812650.1\|2136689_2137508_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|227591
NZ_CP054692.1\|WP_024752452.1\|2121451_2122255_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP054692.1\|WP_002698955.1\|2125297_2125507_+\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP054692.1\|WP_002698960.1\|2123273_2123867_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP054692.1\|WP_039943529.1\|2135629_2136658_+\|DUF4198-domain-containing-protein	unknown	unknown	gnl\|CDD\|227591
NZ_CP054692.1\|WP_024752439.1\|2140694_2141006_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024752453.1\|2120498_2121452_-\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	3.92851e-96
NZ_CP054692.1\|WP_002698949.1\|2131991_2132222_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	6.54277e-19
NZ_CP054692.1\|WP_024752440.1\|2139059_2140259_+\|ZinT/AdcA-family-metal-binding-protein	gnl\|CDD\|370371	pfam09223, ZinT, ZinT (YodA) periplasmic lipocalin-like zinc-recruitment. ZinT plays a critical role in recruiting periplasmic zinc to the bacterial zinc-uptake complex ZnuABC, consisting of families pfam01297,pfam00950, pfam00005, regulated by the transcription-regulator FUR, pfam01475. ZinT acts as a Zn2+-buffering protein that delivers Zn2+ to ZnuA (TroA), pfam01297. Members of this family of prokaryotic domains were first identified as part of the response of bacteria to a challenge with the toxic heavy metal cadmium. They are able to bind to cadmium, and ensure its subsequent elimination.	3.86249e-08
NZ_CP054692.1\|WP_024752445.1\|2132218_2135044_+\|ferrous-iron-transport-protein-B	gnl\|CDD\|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	9.97374e-141
NZ_CP054692.1\|WP_044634998.1\|2126107_2127076_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|223301	COG0223, Fmt, Methionyl-tRNA formyltransferase [Translation, ribosomal structure and biogenesis].	1.58975e-120
NZ_CP054692.1\|WP_024752447.1\|2127408_2130963_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP054692.1\|WP_024752449.1\|2125604_2126108_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	7.9898e-71
NZ_CP054692.1\|WP_024752454.1\|2118096_2120502_-\|endonuclease-MutS2	gnl\|CDD\|234750	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed.	0
NZ_CP054692.1\|WP_002698961.1\|2122749_2123277_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|372644	pfam13599, Pentapeptide_4, Pentapeptide repeats (9 copies).	3.41865e-08
NZ_CP054692.1\|WP_039915057.1\|2131594_2131834_+\|ferrous-iron-transport-protein-A	gnl\|CDD\|377199	pfam04023, FeoA, FeoA domain. This family includes FeoA a small protein, probably involved in Fe2+ transport. This presumed short domain is also found at the C-terminus of a variety of metal dependent transcriptional regulators. This suggests that this domain may be metal-binding. In most cases this is likely to be either iron or manganese.	7.30117e-12
NZ_CP054692.1\|WP_052812650.1\|2136689_2137508_+\|DUF4198-domain-containing-protein	gnl\|CDD\|227591	COG5266, CbiK, ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism].	3.61544e-50
NZ_CP054692.1\|WP_024752452.1\|2121451_2122255_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	3.69613e-72
NZ_CP054692.1\|WP_002698955.1\|2125297_2125507_+\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	8.08952e-13
NZ_CP054692.1\|WP_002698960.1\|2123273_2123867_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	6.7097e-21
NZ_CP054692.1\|WP_039943529.1\|2135629_2136658_+\|DUF4198-domain-containing-protein	gnl\|CDD\|227591	COG5266, CbiK, ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism].	3.30387e-47

>NZ_CP054692.1|WP_024752447.1|2127408_2130963_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MSEKNLVMIDGNTAAGYVAHALSEVIAIYPITPSSPMGELADEYSAQGRKNIWGTVPSVVELQSEGGASGAVHGALTTGALSSTFTASQGLLLMIPNMYKIAGELTSTVFHVAARALATSALSIFGDHQDVMSCRQTGWAMLASNSVQEVMDSAVIAHAATLEARVPFLHFFDGFRTSHEIQKVEEVSYEVMQKMVNNTLVREHRTRGLTPEKPMIRGTAQNPDVYFQSREVVNKYYQATPAIVQKTMDKFAELTGRQYHLFDYYGAPDAEKVIILMGSGADTVEETVDALNEKGEKCGLVKVRLYRPFDASAFVKALPSTVTAIAVLDRTKEPGALGEPLYEDVRTAIGEMQFKKECPFTHYPLILGGRYGLGSKEFTPAMVKGVFDNLSGKKIANFSVGITDDVTHTSLDYDPSFHLDDKDMHQAMFYGLGADGTVGANKNSIKIIGEATDNNAQAYFAYDSKKSGGFTISHLRFGKNKIRKPYLITQSDFMACHKFTYLETFDMLKTLKKGGTFLLNAPYGKDEIWQKIPVEVQKQIIEKEAKFYVIDAMSIAEKAGMGTRINVIMQTAFFKIFGILPEDEAVGLIKKFTEKTYGKKGAEIVQKNITTIDMALAGLEKVEYPKTADSKVTRHSAMTADAPEFVQNVLGEMALNKGDELKVSQLPVDGTFPTGTTQYEKRSIAEHVPIWDSEVCIQCGQCVMVCPHAVIRMKAYDKKELDKAPKEFKSCAYKGKEFENAAFTIQVSPEDCTGCALCVEQCPAKNKADPTRKAINMESFVEHREVESKNWKFFVNLPDPDARKLNLSVPKGVSMKRPLFEFSGACPGCGETPYIRLMSQIAGDRAIIANATGCSSIYGGNLPTTPYAKRADGRGPAWSNSLFEDAAEFGYGMRLTSDKLAEYAREVAGQLKDKNIAADVIAKILANTQEEDSAVEDQRAFVADLRKELEKSSDPLAKEMLSLTDHLVRRSVWIFGGDGWAYDIGYGGLDHVLASGKNIKVLVLDTEVYSNTGGQMSKATPIGAVAKFAAAGKTTSKKDLGMMAMSYGYVYVARIAMGANMSQTIKAFREAESYDGPAIIIAYSHCISHGINMTKGMSHQKEAVSSGLWPLYRYDPRLVAAGKNPFQLDSKEPDFKLADFMYKEVRFKTLKNANPERAEMLLKAAEEKTRRQWQEYKYLADRPF
>NZ_CP054692.1|WP_044634998.1|2126107_2127076_+|methionyl-tRNA-formyltransferase
MLKILFAGTPECAVPVLHAIAQKHHIVGILTRPPAAVGRSKKLIPSAVALATEVLKSEKRISPAAPLFTPEKLNKDVREAIAAVSPDVMVCFAYGKIFGQSMLDLFPLGAINIHPSLLPRWRGSTPVPAAILAGDTKTGVTVQQMALEMDAGDILAQCTIPLDGSETAESLLNLCAQKSADLTLSVLQKITDKTLSPMPQDHSAATFCGMLTKEMGLINWHNSAEEIDRRHRAFVPWPGTFTYKNNEKLSIQALAIAASENTQNAEPGTILTADKKNGILVQTGRGIISLIQLQRTGKKSLYWKDFLNGSAEFLTGKFNTSL
>NZ_CP054692.1|WP_024752449.1|2125604_2126108_+|peptide-deformylase
MEILYLGEESLRQKSIPVENITEEIKDLVQKMFVTMKIKDGIGLAAPQIGKNIRLFVTGVNNEQRVFINPQIIETSEKVCSYEEGCLSIPQIYEKVVRPETVTVQYQNIDGRRKTLQATGLLARVIQHENDHLDGVLFIDRIDEKLREEAIKLFEKKKKPIKKKAAV
>NZ_CP054692.1|WP_002698955.1|2125297_2125507_+|30S-ribosomal-protein-S21
MAYITVDDSENLEKAIKRFKRQVEKEGIIREWKKREYYEKPSTILNRKKKALQRKLMKKNRKTYDSKAY
>NZ_CP054692.1|WP_002698959.1|2123869_2124286_+|hypothetical-protein
MNTECFYAIVLPGNLLSVLYEEQRLFQTLIESQFRKMPPFLKYEKRYDQSVLKISAPELRDGYLIRQCSMQGEKLSECFVLGFGGVHAEKLIKTMPELKAQSKVQNIFLPLQCSNWRLAKVELTHYGTYGICWKLREL
>NZ_CP054692.1|WP_002698960.1|2123273_2123867_+|MBL-fold-metallo-hydrolase
MKIYFHYSIGSFTNSYLVGNEKTSEAIMVDPGRITTEIIHNIEKNNFSLRAVFITHCHATYYDHGLQTIMNVYQPEVFAADTEVDTIKTSVLRGDGLIERAGFTIEYFSVPGYSPDSYMFKIQNVLFTGDSLSAGMIGETANIYAGKNLLKNLHTKILCQDENIILFHGHGPPSSLKSELLYNDELHYPYVSLQPQG
>NZ_CP054692.1|WP_002698961.1|2122749_2123277_+|pentapeptide-repeat-containing-protein
MFSTNCVLTKDVFLKEYGAEKNINSVNVSDQVFENIDFSEKILTGTCFSNSVFKNCIFDGIRMRMSFFEFCQFQNSSFKNSDIQFSSFSGSSFEKVSFKNSVLLHNNFNGIRADETVFDDSDLYNSRFIAAKLKLTGFNNCNIRKTRFFKNTYDAVSFKSSNTREAFFGKGENPE
>NZ_CP054692.1|WP_024752452.1|2121451_2122255_-|glutamate-racemase
MTKKNEQYQYAFIDSGTGGLPYLQYLHELEPDASMVYVADNAHFPYGKKTKEEVIAFASETVEKLIARFNPEIIIVACNTMSVMALDSLRKKFTLPFVGTVPGIKLAVKQSRNKRIGILATERTVCDPYTERLIEEFGSGCYFEKRADQELIAQIEDGLITDSYEEKLKAIQPALEQFKKANTDSIILACTHFLHIEDVFESAAGSDMQIIDTRSGVIHQALRIAPCKKNPDAPPNSCYATAALDTHIEEQYRMYSKLFQLRWGGAL
>NZ_CP054692.1|WP_024752453.1|2120498_2121452_-|ribosome-small-subunit-dependent-GTPase-A
MRGKVLCGANNFFDVSCEDGTVRYCSIRGKKLEDPVGYYNPLAPGDFVLVDEDTHDKEKGQIVSLEKRKNHFVRWNQKTDKPQILACNIDLLVCVTSPANPPFRPRFIDRVLVQAEAEQIPVLIVINKTDLDTTDEVRLRINDWERIGYETLKLSALNNTGVERFAKRIEGLTVAIIGQSGVGKSTLLNSLDPTLNLRTAEISSKYDRGIHTTTQGILLKATHRFRDGTESKTEVIDTPGIRHFAIWGMKPDELALYFPEMQKLLGTCTFGLSCSHTHEEGCAILHALENGGIHPDRYESWRLISEELEALTAEDYS
>NZ_CP054692.1|WP_024752454.1|2118096_2120502_-|endonuclease-MutS2
MTEHTLEVLEFNKICAAIAAYCVTEEGRAACLQKKPLTDKEKITAEKKLGSDFLSLLQTGAEPPVKKRPPLIEFLQSLGKEGSALSIEGIYSIGISAKHCNELHAWADAFEKANANKTPQQDVLQFIRTFPNLLEVYKAVFSFIDEDGDLKDIPELRSIKNKIAAIESDIEKTMRSYFTDEHTRDLLQTNIPVLRNGRQVLSVRSNFKGRIKGIIHEYSQSGQSFYLEPEEIVFKNNELLSAHAEYDRELQRLLKELTAKIAAYAPALEELSEKLIALDCVSASAKWAKNFHCVFAAQPQKDTAAFFLHQARHPLLGKTAVPIDLKLVANDRLLIITGPNTGGKTVSLKTAALFALMNQTGWPVPAGAQTCLPYFNFIACDIGDEQSLEQSLSTFSAHMQNIAEILRSADKESLIILDELASGTDPLEGGAIAMAVLDELAKRDALVFVTTHHGSLKNYGYTKQNCVNASVEFNESTLSPTYKIIMGVPGESHAIDIAERNGMPQHIIAQARAYIQDNRADVSALIQSLVQKHADLNKFEEEKQIEQQALRSDRRRIDLKELQLKQKELELRKQGYKRLDNLFSDKRRELENLIREIKEGELTSEKTKKVKQWFDNFESELAEEKTGMREENAELTALIKKRSDKNKHQTPQTPFTEGMTVYVSSFRRKGTLIRKEKKDTWLVSFDTVKMVVFENDLQPLESEQQKKQPVQIITEISSDKRPQFELRLLGLRIEAAEKALQDQLDLSAMHGIKEFAVIHGKGSGILQTMVHEKLKQTTFVQNFYFARPEDGGTGKTIVHLE
>NZ_CP054692.1|WP_039915057.1|2131594_2131834_+|ferrous-iron-transport-protein-A
MEFTLIPLIVLKTGEKASVLKFDGTGAEFTRLRSLGIDVNTELTVVTSQADKKGPMLLLVNGAKYAIDYNLASKIFVLI
>NZ_CP054692.1|WP_002698949.1|2131991_2132222_+|ferrous-iron-transport-protein-A
MTLDELEQGKNAVIENLEITGSTLQRLISLGFTPGAEVSVVRKAPFLDPFDISICGSLVAVRRDEAKRIIIRELAE
>NZ_CP054692.1|WP_024752445.1|2132218_2135044_+|ferrous-iron-transport-protein-B
MKQDQIHIAFAGQPNSGKSTLFNMMTGARQHVANYPGITVEKKTGNYQAFGQSVLITDLPGTYSLTSYSPEERVSRNFILFEKPNLLVNITDASNLERHLYLTFQLLEMQCPVIMYLNKTDIATYQGLKIDIDKLSQTLGIPIIAGSAKRKEHAQELKQCIAETTGHTQNPYMLSYGKDMEACLAAIVERLQKAQKNAEDAVPLRWLAIKLCENDSAVRNEQKEKFEEFDSILQYISELEAQHKEKHKHSFEIEIALARAGAAKKIIADCVTKVAADKKTVERVRLKRRIFEGLSALTLFFVTFQILDAVLVMFPGVFQHNSVRLCINLLLSGIFTGGAAFIYVKGGENAVNATDRVDKVLCHRVFGILILVELVLVFYWITVILGYKMTDKVFPVFKFFRSIVSQLIPAQGLISEGLLRGLFLNGIIDGAIMILNYVPIFFCLFALIAFLEDVGYMARLAFIMDRILRKFGLHGQSTLPMILSGVIMGGCVVPGVMSTRTIRDNKSRLVTILILPLLNCMAKIPFYVLITGIFFVRYQWLVLGGISFITLLVALIVAKYFSLYVVQGTPEPFVLELPAYSLPTVRGVLTRTFERLWSFIKKVATTVVAVSVVIWAGVSFPAMGEKEQAVFNTEKDTYIHNFVRSLNNSYAPYFASEKGFLDYQNLTERMYLLETLTSFGGEKAVARSMNRLFLENPEMTKIALRGKLELGDTIHAFKDYFTRYAAAEKDFINAYAQTPDFQKPIMKSAFYGYWQRMNPFFFAIVRTGSISISGTSVVDRDAAAMTRSLRTAFADLKLISVHYHRETLEHSALGYLGKGMEPVTKYAGFDWKINIAILGSFAAKEALVSTLGTIYSVESASEDSGKLLEARIQDKETGMTPLDGLTIMILIALFPPCIATMIATKTETQSIGWTAFSVIYPVVLSSLVAVFVFQFGRLLGF
>NZ_CP054692.1|WP_024752444.1|2135096_2135633_+|hypothetical-protein
MKKIYLLLVLIISAPVLFAHTPLLTVEDNGDGTIYVQGGFSNGASAAGVKLYLTDKNTGEKLWDGEFPAVGEINLEIPAVPYTVTFDAGPGHVVVKDGPLYERGADDAPAQKDATENGGTVTAGSVAAPSASWVPMDTVSAMPSVGPSFTAIAALCLAILNLVLILFLFRKIKNRSSL
>NZ_CP054692.1|WP_039943529.1|2135629_2136658_+|DUF4198-domain-containing-protein
MKKLVLTAFLFTSAFFLFAHFQMIYTSSSIIEQNAKSAGFILTFTHPFESGLTMDIGKNEQGEIKGLKEFYSIHKGKKLDLLSMIKESEFTSAENKASAYTFTLDKDSGFRGGGDWVLVAVPHPYYEASEEGYIQQITKVFINKAGLATDWQTACVKGYPEILPLVKPYDIWKGSIFRAVVLDSNGKPVPFAEIEFAHINYDVDMQAKAFTGKAKLEQAGGGIILADATGVFEFIPPCAGYWGFSALGVGKEKEFSGKALSQDAVIWIEINKDETEPAPASNENEEKTAASEETSASEKNREPRKDDFSPAALIIVILLFAVMFAWPPIFKKMSEKSEKKDS
>NZ_CP054692.1|WP_052812650.1|2136689_2137508_+|DUF4198-domain-containing-protein
MKKNIGILLLLCAIGATVFAHHQMIYTPASIIESNEVNFKITFTHPFVSGHTMDIGKNEQGEIKGFEKFFSVHKGKIQDLLPSLKKTSFSSAENSALAFDLVLDKTNGFRGGGDWALIGVPYPYFEEAEDGYIQQITKVFINKAGLATDWKNRCAEGYPEILPLVKPYDVWVGGVFRGVVVDANGKPAPNIEIEIAYINYDVNMEKSAFEKTPKTNRGDAIILTDSNGAFSFVPTESGYWGFSALGAGNKKEFSGKALSQDAVLWIEASLPK
>NZ_CP054692.1|WP_174897159.1|2137516_2137708_+|hypothetical-protein
MVEKIIIGVAVLAIILLFVRKYYRIFTGKASACSCGEKNDMKNGCGCCCSACHDTKEKREEEG
>NZ_CP054692.1|WP_174897160.1|2137733_2138942_+|ZinT/AdcA-family-metal-binding-protein
MVKKIIGIKRMSFFIFITVFFIACQSAPKSKTETIAAGNEMAAWKGEWVSLDTIKTDAALEDSYTEAAKNMAHYTVEGFKAAVADMYQTPVLKMKFDGTNTVILTVQNNKEAIVEVPCEYVYKGKVAVLGEKNRFWYTFQAAKDIRELKNAKYLIALPPEQDDSGILHWHARISSHDINWLVNGKKTWPTYVAESTPQEKKIQNLKESIRTLPARLPEKPFEQYADNGKWINRPAVFDNTSKEVSAAYEKIIKEFAGKNPKGGDFTKEEIIAEIKKNDKTLNTLDDFTHLSFLTEGKKNELIIYKGEKIVFQSEYKRVAQSTSRPYITMRAEKKDAGKFSLISFVVVHGAPMYHFHLWYGRNETDLENQEGVPTCFSTTKISNETFANYIEKTCRRTLTAEN
>NZ_CP054692.1|WP_024752440.1|2139059_2140259_+|ZinT/AdcA-family-metal-binding-protein
MSKKRIGTLLVPVFMALAVFFTACQSAPDAESGATPKTGELAGWKGEWISFGDTKDDPSLEAAYKETAEKMPNYTVEGFKAAFAAMYKTPVVKAKFDGSNKVKFTVRDADGKEEEIACEYKYIGKIPVPGYEGSSWEAFEAVKDVRGLSQAKYMVLFPPHSHDGGMLHWHARFGARSAEAIAKDTSFWWPTFVSASMSKEDLLKEAKEGIKAMGSMFDKSPFEFYAAQGRWMNSSLIYDNTSKEVSNAFDKIIKEFAGKNPKGGDFTKADIIAEMKKAYGTTDDFSHIEFVTKKGKNELVLYKDGKEVYKAAYKRVADNPSKPGMLAVATDKGGKFKTISLTGAHGTPMHFHLWYGASDIDLTQFTTKPTCIPENTSNADIAARVEKSCRSVLNSILMK
>NZ_CP054692.1|WP_024752439.1|2140694_2141006_+|hypothetical-protein
MKKRNVILICLLAFGAAFLIAHTPLLLCYDNGDGTITCEGGFSDGSSAKGVEIRVVDNKNKVLIKGKLDKNSEFTFKRPKGNFSVIFDAGPGHVVKVKSEDIE

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Crispr_ID: NZ_CP054692_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_11

2212470-2212558

Unclear

Consensus_repeat	Method
TTGGAACCACGGGCGTCCGTGCCC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP054692_11

>merge|NZ_CP054692|11|2212470-2212558|CRISPRCasFinder
TTGGAACCACGGGCGTCCGTGCCCGTTCTGAGTTTTGCCGTCCGTGGCAAAACCAAACCGTCTGCTTGGAACCACGGGCGTCCATGCCC

>NZ_CP054692|11|11|2212470-2212558|CRISPRCasFinder
TTGGAACCACGGGCGTCCGTGCCC	GTTCTGAGTTTTGCCGTCCGTGGCAAAACCAAACCGTCTGC
TTGGAACCACGGGCGTCCATGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024751964.1\|2197265_2198711_+\|DUF115-domain-containing-protein	unknown	unknown	gnl\|CDD\|376693
NZ_CP054692.1\|WP_024751965.1\|2198703_2200227_+\|motility-associated-factor-glycosyltransferase-family-protein	unknown	unknown	gnl\|CDD\|225324
NZ_CP054692.1\|WP_024751968.1\|2210432_2212307_-\|beta-N-acetylhexosaminidase	unknown	unknown	gnl\|CDD\|119335
NZ_CP054692.1\|WP_002701200.1\|2206393_2207929_+\|ribonuclease-Y	unknown	unknown	gnl\|CDD\|188306
NZ_CP054692.1\|WP_024751972.1\|2217875_2218433_+\|DUF2147-domain-containing-protein	unknown	unknown	gnl\|CDD\|378304
NZ_CP054692.1\|WP_024751969.1\|2212616_2214053_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600
NZ_CP054692.1\|WP_002701199.1\|2205547_2206177_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_CP054692.1\|WP_024751971.1\|2215594_2217676_+\|elongation-factor-G	unknown	unknown	gnl\|CDD\|237186
NZ_CP054692.1\|WP_002701185.1\|2200223_2201582_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP054692.1\|WP_024751966.1\|2203571_2204594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897172.1\|2226206_2228411_+\|DNA-helicase-RecQ	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|273594
NZ_CP054692.1\|WP_024751963.1\|2196357_2197266_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148879008.1\|2202465_2203569_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP054692.1\|WP_174897170.1\|2222911_2223493_+\|transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP054692.1\|WP_024751970.1\|2214214_2215399_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP054692.1\|WP_174897171.1\|2223582_2224797_-\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|224220
NZ_CP054692.1\|WP_002701217.1\|2220529_2221615_-\|Hsp70-family-protein	unknown	unknown	gnl\|CDD\|365808
NZ_CP054692.1\|WP_024751967.1\|2204594_2205551_-\|outer-membrane-protein-assembly-factor-BamD	unknown	unknown	gnl\|CDD\|276939
NZ_CP054692.1\|WP_174897169.1\|2222592_2222949_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227708
NZ_CP054692.1\|WP_024751973.1\|2218434_2220549_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024751964.1\|2197265_2198711_+\|DUF115-domain-containing-protein	gnl\|CDD\|376693	pfam01973, MAF_flag10, Protein of unknown function DUF115. This family of archaebacterial proteins has no known function.	1.29837e-12
NZ_CP054692.1\|WP_024751965.1\|2198703_2200227_+\|motility-associated-factor-glycosyltransferase-family-protein	gnl\|CDD\|225324	COG2604, COG2604, Uncharacterized protein conserved in bacteria [Function unknown].	5.9049e-28
NZ_CP054692.1\|WP_024751968.1\|2210432_2212307_-\|beta-N-acetylhexosaminidase	gnl\|CDD\|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	2.63319e-98
NZ_CP054692.1\|WP_002701200.1\|2206393_2207929_+\|ribonuclease-Y	gnl\|CDD\|188306	TIGR03319, RNase_Y, ribonuclease Y. Members of this family are RNase Y, an endoribonuclease. The member from Bacillus subtilis, YmdA, has been shown to be involved in turnover of yitJ riboswitch. [Transcription, Degradation of RNA].	0
NZ_CP054692.1\|WP_024751972.1\|2217875_2218433_+\|DUF2147-domain-containing-protein	gnl\|CDD\|378304	pfam09917, DUF2147, Uncharacterized protein conserved in bacteria (DUF2147). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.45121e-15
NZ_CP054692.1\|WP_024751969.1\|2212616_2214053_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	2.04742e-90
NZ_CP054692.1\|WP_002701199.1\|2205547_2206177_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	1.29904e-112
NZ_CP054692.1\|WP_024751971.1\|2215594_2217676_+\|elongation-factor-G	gnl\|CDD\|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0
NZ_CP054692.1\|WP_002701185.1\|2200223_2201582_+\|hypothetical-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.38793e-10
NZ_CP054692.1\|WP_174897172.1\|2226206_2228411_+\|DNA-helicase-RecQ	gnl\|CDD\|273594	TIGR01389, recQ, ATP-dependent DNA helicase RecQ. The ATP-dependent DNA helicase RecQ of E. coli is about 600 residues long. This model represents bacterial proteins with a high degree of similarity in domain architecture and in primary sequence to E. coli RecQ. The model excludes eukaryotic and archaeal proteins with RecQ-like regions, as well as more distantly related bacterial helicases related to RecQ. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP054692.1\|WP_024751967.1\|2204594_2205551_-\|outer-membrane-protein-assembly-factor-BamD	gnl\|CDD\|276939	cd15830, BamD, BamD lipoprotein, a component of the beta-barrel assembly machinery. BamD, also called YfiO, is part of the beta-barrel assembly machinery (BAM), which is essential for the folding and insertion of outer membrane proteins (OMPs) in the OM of Gram-negative bacteria. Transmembrane OMPs carry out important functions including nutrient and waste management, cell adhesion, and structural roles. The BAM complex is composed of the beta-barrel OMP BamA (also called Omp85/YaeT) and four lipoproteins BamBCDE. BamD is the only BAM lipoprotein required for viability. Both BamA and BamD are broadly distributed in Gram-negative bacteria, and may constitute the core of the BAM complex. BamD contains five Tetratricopeptide repeats (TPRs). The three TPRs at the N-terminus may participate in interaction with substrates, while the two TPRs in the C-terminus may be involved in binding with other BAM components.	2.5939e-07
NZ_CP054692.1\|WP_148879008.1\|2202465_2203569_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.52643e-07
NZ_CP054692.1\|WP_174897170.1\|2222911_2223493_+\|transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	0.000694617
NZ_CP054692.1\|WP_024751970.1\|2214214_2215399_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.00116076
NZ_CP054692.1\|WP_174897171.1\|2223582_2224797_-\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|224220	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion].	1.19399e-38
NZ_CP054692.1\|WP_002701217.1\|2220529_2221615_-\|Hsp70-family-protein	gnl\|CDD\|365808	pfam00012, HSP70, Hsp70 protein. Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region.	3.40608e-06
NZ_CP054692.1\|WP_174897169.1\|2222592_2222949_+\|hypothetical-protein	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	3.42201e-05
NZ_CP054692.1\|WP_024751973.1\|2218434_2220549_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	2.33767e-61

>NZ_CP054692.1|WP_024751968.1|2210432_2212307_-|beta-N-acetylhexosaminidase
MTDSFLSLLFASLSEDLQAKLTSNPLFKKKRRYVQIENEPHDIAVLDTEDAILLQYTHPYQAGRCIALFFESLAFDLPLPRKEKSRYQSLGLMIDCSRNGVLLPAAFKRLLPHLSLMGYSSVQLYMEDTFTIDEYPYFGYQRGRYTQNELRELDAYAKEYGIELIPAVQTLAHLQQVLKWQAFANLRDCNDILLIDSEETYAFISAMFKSLTESVSSKKINIGMDEAAMVGLGRYLDLHGYTNRYELMLRHFRTVHALAEKQGFTSVYLWSDVFFKLATGESYFSKNLSLHAIDKNIAADIPAGSRLLFWDYALRPSEDYELPMQIHKAFCNNAGFAAGAWKWASFFTCNQFSIAAAVSVHGAAKKTGIQELLVTAWGDDGNEASLFSVLPAVSAWAELCWADSLELLPRRFALCCNADFESFLSLDEPILTPDNPAPGKCTVNPSKYILYQDILAPLFESHIQGESTYAHYRQCAEKMKQAEAKNPAWKELFQTGFALSDILAEKSILPQKIRRAYEAKDSAKLKEIAEKDLPALAQKIQNFISIYSRQWQAENKIFGLDVFDLRMGGLLQRITRAQERLVLYAKGTLRELPELNQKPLSFDPEYPNAMYSPGWKNIATASVL
>NZ_CP054692.1|WP_002701200.1|2206393_2207929_+|ribonuclease-Y
MGTTILIGIILVAVGLILGWTIRWLYARFQLSASEQRAERVLQEAKKEAEAQKKDILLEAKEQLIRERNQQERENRERRNDLQRSERRLAQKEDVLDKRLETVEKQEKQLVEREAALNERDKNLSGEEERYRERLEEISGLTQAQARDLIISSLEAEAKHDAQALINKIEEEAHLVAEKKARDILVTTIQRLATDTTSDITVSTVSLPSDEMKGRIIGREGRNIRALETLTGVDIIIDDTPEAVVISCFDPVRKEIARIALERLILDGRIHPARIEEIVQKVTREISQKIYEEGEKVLFDLGIHDMSQEGVRALGRLYFRTSYGQNVLYHSKEVAVLAGMIAAEVGADVEIAKRGALLHDIGKGVETDSDKNHAEIGMEIARKINEDPRVVNAVGSHHNDIEPSCVEALLVQIADAISAARPGARRETMDNYVKRLENLEAIAEGFPGVEKAYAIQAGRELRVLVNNEKIPDQDVKVLGRDIAKKIENDLKYPGRIRVTLIRETRIIEYAR
>NZ_CP054692.1|WP_002701199.1|2205547_2206177_-|ribulose-phosphate-3-epimerase
MRKSFLLAPSLLSADFSKLGSELIYIEENGGKLIHVDVMDGHFVPNLSFGAPVLKSLKGKTSLPFDVHFMVTNPSDFVKDFAEAGAEYFTFHIEAAVHAHRLIGLIREYGMKPGISLVPSTPVSVLQEVLPFADLVLVMSVNPGFGGQKMIPECIEKIRQLKKIREEKKLSYLISVDGGINSQTLPVAAEAGADIIVSGSSFFSGELRV
>NZ_CP054692.1|WP_024751967.1|2204594_2205551_-|outer-membrane-protein-assembly-factor-BamD
MKRYLLLCVCILFSSAFSFSQDYLTAGLDAYARSDWSSAIFSFQKAMKPQSAQYNEAWYWLIMAHASAHNYQIALTQAEKFIQANPRSQRMPEVVYQRGRIFCLCGAHENSINELYAFIKRWANHSQVPSAYYWIGENLYLTGRFPEARSIFSRILIDHPQSAKVEAARYKIALIDQSKTQEELLKLLKMSHEEFLRLTEESEKREKIYNQTIEAYQKKIGEMNKDPRTAELEQLLKEERQKNIELYDALTMVEMKNQELSAALMLSSTEKPPAPEEKSPSLPADYADPNKRRKALEELRTKARKLKFMYDNLLKETK
>NZ_CP054692.1|WP_024751966.1|2203571_2204594_-|hypothetical-protein
MRRFTKKSILIFCIGIGMLVSAAANEALELSSGFLKVMVYPKTGSFTLYRFDVCKKNYTPLYDSTRSGSVNVISLHFNRTVYPLIKKIGSTIFAEKIDNRIVMTFQISKDFKVTQTFYFIPGEKELGGQYLKIDISVHNLSENSVFAAFKALIDSSLGENKKRFLYTDTKRDITSEILLRLDTEKDATIVSSDVNAACLFLLKHPQAITPINVYAANRNRLTGHEWLPHYQQGRSFTKGNSVSDAAMLFIWKEKLLKKGSIMTVSMIVGCADYCLLTAQRIRDSITIAETESERIKKNYDYIQKLLQKIEKVEENPDIVSDEAIYDLTDQTDKAIKDIQE
>NZ_CP054692.1|WP_148879008.1|2202465_2203569_-|hypothetical-protein
MALSVLERAKKKFVQKKYNEVISLLEPCVLDYHESFSFHLYLGLACLHEGVIAGALAYLDRAKQIKIAHPDPDLLCAQAAIALRRRDTNKAVECYLDALEVDPKHLLAKKGLDFIKNNNTPEAIGDFIQSGEIKKLYPQPGVREHHRKLIFSCVGTGILCALGISLGVVFFHSNSSGIRGQRADLSALALVADEESAPLSGEGDFLYTLTNKEVIASYKAAQKYFQSFKDNLAQVEVNRILYSNASPAIKRKAKTLTEYFTVPGFDTIKDSFPYSEVNTNKELYLDCWVVWKGMATNIKQSEQTLSFNLLVGYDTRTELEGVVPIVCNFSLPVDADKPIQVLGKVQLRNGILYLRGKSIFQSQQPAQ
>NZ_CP054692.1|WP_002701185.1|2200223_2201582_+|hypothetical-protein
MSKISIRIYAIFVTVVIVFTILWFALSVSSAVQKNTEGARVFFSQTAQRFFSLISPEKPVTQANIEEIKKICEDSGVILALHIASPQSKLFNWAKDGEGFKYNKDNELELSDNPLFVKVFSGQLGENQSSILTFTAAINILPTEFIFARFRAVFFIVLFLALLSAILLSLQYIYLPASTKRVQNKEKEKFSFESAEPAATSTTSQMYSQDSNESTDSYDSSKKEAFSFAKKDSDLTLDSLDNLNLYKDYPENNFFDDQEFSKTNTETAPDQTDSTTVEASAFDEPIEENDQRMELGLFTPITGIGWESYLSERLEAELGRATASDNDLTLMLIKIPGVVQESELAVNISHRLVETFQFRDMIFEFGNDGFAGILQDTSLDEAMPLAENLRADILQIEGLDTEAQVFIGITTRTARLTSAERLLEEASGALQKAEESSGANPIIAFRVSASRY
>NZ_CP054692.1|WP_024751965.1|2198703_2200227_+|motility-associated-factor-glycosyltransferase-family-protein
MNKIFTENIAALKKENTRLADILEKTESNSAYSNVFVAKSGELVPLLKNGKPLHSKYDPKKEAQNLLPKESCFVLFCGIGSGVQIKLFLETFPQAFCGVCEADYPTLRSAFDCIDFTEIIANKRLYFFAPISVQRLPQELAERYLPAMHGNFSVYSLSAWTRFFPEEIKLFSHLVDAALDKIRADYSVQAHFGKLWLRNAFINLQTAAKICPCLPKVSLRTQAAVLGAGPSLEEGIKKIQSERSAYTVFATDTAFPACIKQKLIPDFFIGIDPQYLSYAHSFPPLPKNTTAIFDLCACPSAITPFIENKNPLIFAAGGHPLAQLAAEYSPFPYMETSSGTVTIAALSVASSLGFTKPLTFGADFAYINGKPYARGTYLFDLYQKKAVRTAPAETSFSALMFRTQTKKITSDSGITYTTDVLTRYKKSFLSFSSENIWKKEDFSAFPYNEFIQFFLKSLKEERHETSLALLPFFAWYKLKKKKKGENLDSFSIRELVFGEILRYTKLK
>NZ_CP054692.1|WP_024751964.1|2197265_2198711_+|DUF115-domain-containing-protein
MIPQVALHSKYNPQKEAETFAGSIKTNPAIIVISEPGESYAAESLRKRFPSAKLIALRYSQTLFSESDFLWDSVWRPQAGSLEFFLIQNIHDEELSNTIFIPWKPADRAFPNEAKLVWQGIATAIKMIQSEMATRTFFGKRWLANILRNSMFAEQVIDFSFYAERVIFAAAGQSLEKCLSKKTGAPIAAVSSALSALAYRGVKPIFCVSTDGGFWAAAHLKRIATDIPVLFPLEAAIPSNVLINNPLSFLNYGSKTESFFLDAFQAPSISAQRNGSVSGTMAELLFNFRIKKIYLCGLDLAEGKGFQHARPHASGIAKTFRTMPLASIIAKGGNPQSLEIYANWFMQLPKEKTDCLIRVGEEGRALPSIKTISLKAFLTQMPTVMPQIRTQTIKKISKKDRFALVHTYLLLLEKTAKLKNGATKFLERGIEKEAAEFLAYPELLVAIKNRGTKERSIAAQKLCEKVSVEIKKLRQRLQIHE
>NZ_CP054692.1|WP_024751963.1|2196357_2197266_+|hypothetical-protein
MGLIAKAEILRGSVFFDTEKNSLYGELERKFAELRDAIGIERAGFLYPDEKKTFALHFAFGLDITTLHRMVIPFNTIKNVLPQNNWICIEGANLEALRVYFSSHEFASLKRLYLYPIKIQNISLYIIFFDSLLNVAGKNFQPEKAATLIKNFLPSLKKAFSVIKITKLIYPFQKGQRLIKERIDAAIMAENTANLFTLNTSAVFPNIIRLHGDISKLRLYYALINRLMVLVGTSNLFLFESDLQMQIVIFSVSPIDAELYITQLRQSVQEIFGLSVAEKLLIASKGNSKDSEEVLKFLHLKG
>NZ_CP054692.1|WP_024751969.1|2212616_2214053_-|D-alanyl-D-alanine-carboxypeptidase
MQTGKKRSLFYFFLILVVVVFWTSVGSLFLFSRAKKLQNHTALPLSAEEQVLLLEDFYAKYKVEGTPQLANLCPAALMRETKMQNPAPILAAQSVIVANADTGQLLYEYQADRKIPPASLTKLVAMYVAMQAIDSGEITLDQVVVPPRESWAENIPPGSSLLFLGPNQQLTVSELLRGMAVVSGNDAAIALAHAVSGSVPKFVERMNQAVKTLGLKHTVFTEPSGLSEENYTTARDFARFCLVYLREYPENLERFHALQELTYPLSHNVKNLISITQPATNTLLGKLKGCDGLKTGFIYESGFNIALTCKRAGTRILAVILGGAGKTIAQGRAIREKDGEKIMNWAFHNFQTYPLIIEKKALAQIPVIGAARQSSQASVYPIIVFGRFAQNKTTVFRLNEKNTDNSSTELLHLQIHLPKQLYAPLDKGEVIGTAYLMRTVDGKEFPYGSFPLIADRDVSAASDLSKKLDILSLKLFGK
>NZ_CP054692.1|WP_024751970.1|2214214_2215399_-|hypothetical-protein
MNTDKKNTGSLAKDLHEREQELKTAYINFGEKLISDNTFLPERNNEKKTFGEEWNELRQEREKATNTILKIKAITQRQGELVTFEKQLEKILKEHMKDNQRSASDFVLQFYKAYNHLSLECLADLKNKVEDIEEKISELQASIKKQDDEKNDAKFFEKIGLQVKTFSTENKIKYLQEKIKKIIIRESSQILAHSQIQQMYENGEFSDELAESYRILFLNKLKQSENDERKQNLEKEKQSLLEQLKECDCGTNPQKRIAVLTVQFKELDENIDHLCKEAAFQYCEQYLTDEGKEKDSAHSFPAEYAERLHTIAAMRKSIAHLKYSIEQNELIQKHSAEDKKIINFKKSIDDYERGIKEYQQMIESAEKNIEISEAKKQELSQKIDALSAKIEDLN
>NZ_CP054692.1|WP_024751971.1|2215594_2217676_+|elongation-factor-G
MSVSTNDIRTIVIAGHGQSGKTSLTESLLAVSGVIQKPEAVQGGKTVSDYTPEEIERKISIYASLVHLPWKNKTINFWDTPGSSDFIGEVVTAFRSSEIALVLLDSRSGVQIETIKYWRDLDRRNKSRMVFVNKMDEERADFAHCISDIKKQFSVEAFPVTFPMGKGADFKGIVDVLKGKAYEISADGKEKEVDIPAEYMDEYKRQLEILAGAAAEGDEELLIKFIDEGELTSEEIAHGLTLAIKDNRIVPAFAGSALKQSGLTSLLNFITDILPSAEGYLERAEKGEEAVTVKVDETAPLSALVVKTANDQFSGRLSYLKVITGILNADSEVYNVNEQKKERIGKLYRPLGKKLVEIRELVAGDIGVAVKLANAKTNDTFTATADGLPFVKLRTPEPIYSIAVSANEKKNDDKLSEQLFKACEEDMTLSFQFNPETKQNVFSGMGDLHTGIILDRIKKQNKIEIETSVPRIAYRETIRQKAQAEYTHKKQSGGHGQFGRVVLAIQPLARGEHYSFANAVFGGAISKGYIPGVEKGVKEAMEHGVLAGYPVVDVGSTVLDGKEHPVDSSEMAFKIAARNAFKDAMRNAGPILLEPIMNLTVYVDTQYLGDIMSDLSSRRGKILGQSSLANGIEEIRSQVPHKELLRYAIDLRSMTSGTGSFEMSFDHYDPISGKIADEVIAAAKAFIEEQKEE
>NZ_CP054692.1|WP_024751972.1|2217875_2218433_+|DUF2147-domain-containing-protein
MKRVITICLAVLCMACVFSDPAEGFWKSLGRKKAVTGLWRFEVKDNVLYGTCVLAMKEPVDRILTKCKKNYKGYPLDIDLSTQRQIDVPLIYGVQKQSEGVWRDGHIIDARNGRLYTCHITFHPAGTENFKVDTLELRGEIGLGIGMSQYWEPTTAKEINQFILANIEKYGSEETKKNKEKFLVR
>NZ_CP054692.1|WP_024751973.1|2218434_2220549_-|lytic-transglycosylase-domain-containing-protein
MKSLLNKQNLRNGKYHSAFLHKKFLFLCIVFCSSFFSCSTGSNIGKVFSALKDHDYSFFENPTKKTIKLVSRSGAGGLYFVGIHLKNAKNEEDAHKFFVQGTKGKAPFNLLCEEEAAITGTPEQRLLFIETALKTLSKQKTASKELIVKKEHLEDLQEELLFLLKRFDILKNSVKSIYIDTAFQAEKCEYFSEVLEAFPDLPEQFTDLVQARILLFYKDYRPAWQGFQKLLEDPVSVTEYLTDPVLSDIGRAALYGSQNAIEAAMLLRSISDTVKGASDLPKEQNLEFYTNFYAARLYTKAGSEGLKKALSLFQTAQQYAPTPADSDNTLWYYLDTLKKLSFNDFFTALTKTCGTWNDPNWFADLTDYTIVELVGRKQWQRLKILAEALENTALPDRQARIAYVLARSGMLSPEETTVAYQTAFQKDHYSFYYRILAANVLQIPLTDSLYKVRKQRNTHSFFSAEHSMEILRGYAVYELPDLIYPSIAKVYPNISVAEATELSHIQISQNRWADAIKIMSYALHSEDAVFDDEQLKLIYPRPWLDIVQKYAKQYGIAEYVLYALIRSESLFQPAVISHAGAIGLTQLMKPTAADIARKLKITEYDLTDPDTNIQFGTFFITDLIRRWDGAIMPALFSYNAGYARVRNWKKLQKDTPDDLFLETLAYGETRGYGRKILAAAVMYGYLYYNKTPAEIIAEIVGAHD
>NZ_CP054692.1|WP_002701217.1|2220529_2221615_-|Hsp70-family-protein
MASKIGIKLADGRFFPIMDENSLSSEELELTTVRDNQTSVQINLFKKQDVAEPEYIGSLIVEDIKAKPAGDPTIELKLSLDEDKNLSAEAIDVDSGTRQGLKVSLETLDSNAFDIPDFDLSPVNDNIDFGSDPSFDNLAFSAAQESEQKKEKEYKQDHKYEEKEKRGLPLWLLIILVLLGIAILVLAILLLTRSIGRSSKEQDSPAPVEKTIDKKDTEQIESERTQGKTTEPPKPAESEIKATESVQVEKEPDVVQIETKQDEVQKPVQETVQKPAEEPVQKLAQVQETVEKPIADKKETRPEPVTPGAAVRHKIKWGDTLWDLSDTYYKNPWLYKKIARHNKIKNPDLIISGRYIEIPPK
>NZ_CP054692.1|WP_174897169.1|2222592_2222949_+|hypothetical-protein
MSTLCTDIAVSEASVRKFITLLGSLQEQADAFMRDQVMPANALLFDGTSIFTRSADSLAAKGYNPQHSRGTQARILYVFEKNSHKPVFYRVLQGSIVDKVAFMETVHAAGCKDCYYCG
>NZ_CP054692.1|WP_174897170.1|2222911_2223493_+|transposase
MLPAVKIVIIADKGFYSKENLAALMNAGLQFILPLRKDTVNVEPAFYENTDDSKWDGVFTYNKRPIWFRKKPSGTKGNFIYTYRDDSRKAELVGQYVEKVEKFYGERTHEPKDVLKKIRMGYFSFCSNLDVSARDIYMNYKERWDIEQCFDYLKNSVSQSASHAHTDEYFRGWAFVNHISLLYYYGLLNALRT
>NZ_CP054692.1|WP_174897171.1|2223582_2224797_-|dicarboxylate/amino-acid:cation-symporter
MKIWLKYLIGIIIGVGFSFLASSENVFFAESAAFISNITILAGRYSLYPVLFFGFTVSIFELRENRGLFRIAILTVLIAAGFALLLSTIGLISVLVRQPARIPIFVEGISQIQQIGIKESILQLFPSSAFEAFVNGSYILPLCILGGFAGAGCAVDKAIAKPSLTLFDSLARVSYAVMVFFVDILSIGFIAVSAHWVIEFRAMLSSKIFIDFIILLFVNFIIIVGVIYPIIIKLVCRDINPYRVIYAAMAPCFAAFISGDANMTLSVLLRHSNESLGVRRRISSVTLPMFSVFGRAGTAMVITVSFIVILKSYSSLGVGFRNMFWLIGVASLFSFCLGRFPSGGAFIALTAICMLYGGGFESGYLILRPAAFYLGSIACAHKPLSFYVIDRFQGYQGCVEFSFV
>NZ_CP054692.1|WP_174897172.1|2226206_2228411_+|DNA-helicase-RecQ
MLLFSTITNEIHEGVSVQNARAQDLLKRIFGHTEFRSRQEDIINAILAGNDTLAVMPTGAGKSLCYQIPAIMMSGVTLVVSPLISLMKDQVDALTENGVSAAYINSSLEYTEYCAILSGVRAGTFKLIYIAPERIENSFFLQLISEISVSMLVVDEAHCISQWGHDFRPSYRNIAAMVQTLKKRPIVSAFTATATKPVQEDIIKQLNLQNPFTVVTSFNRKNIFFSVVHNADKHEYLISNLNKNTSAIIYCATRKICEEVYSFLKKNNYPVSIYHAGLSEKERAQNQELFMYDKKPIMVATLAFGMGIDKSNVREVIHYNLPRSIENYYQEAGRCGRDGESAKATLLFSAQDKFINTFLIENSGGRQEEYDKLESMLAYAKTNHCLRKKLLAYFNEELAEDCGACSNCKAAFIEKDISIEAQKILSCVKRTNERFGSGLIADVLIGANTKRVKDFGFDSLSTYGIMKGETKRTVVRLIDELIAQECLVSSGYPRPILQLNRKSWAVLKGEKVFIKEHKAIRQEHKQLRPELLAELQTWRKLRAEKENVPPFIILSDASLHSLTALLPVTTEELLQVEGIGEFKNEKYGAELKTIITAYRNAYPDEKPILLNQKIKKPPKKKEKGAISETVMQSYSLYSQGLSIEQIAEERALSPQTIEKHICDCYEQGLAVDIYAFTTPEEETLILQAAEKTGSKYLRPIKDLLPESVSYLAIKLVCIKQKTVNSQINQSEVSQ

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Crispr_ID: NZ_CP054692_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_12

2283413-2283561

Orphan

Consensus_repeat	Method
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_12

>merge|NZ_CP054692|12|2283413-2283561|CRISPRCasFinder
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAGCACTGATTTAATCAAGAATACTAAAAATCAGGGCGTGGCGGTGGTTCCACGCAGAAGCGATGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG

>NZ_CP054692|12|12|2283413-2283561|CRISPRCasFinder
AGCGACGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG	CACTGATTTAATCAAGAATACTAAAAATCAGGGCGTGGCGGTGGTTCCACGCAGA
AGCGATGTTTTAAAGCAAGGCTGCTTACAAAGCTTTAAAACTCGCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_039943365.1\|2294651_2295944_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_CP054692.1\|WP_148879026.1\|2285237_2285897_+\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_CP054692.1\|WP_024752013.1\|2275389_2276262_-\|NAD(+)/NADH-kinase	unknown	unknown	gnl\|CDD\|223139
NZ_CP054692.1\|WP_024752019.1\|2290426_2292145_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|273349
NZ_CP054692.1\|WP_024752014.1\|2276274_2277297_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_CP054692.1\|WP_174897312.1\|2279991_2282067_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_002699714.1\|2268261_2269665_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP054692.1\|WP_174897173.1\|2272253_2273054_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752012.1\|2273111_2274800_-\|DNA-repair-protein-RecN	unknown	unknown	gnl\|CDD\|223571
NZ_CP054692.1\|WP_024752020.1\|2293149_2293857_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP054692.1\|WP_024752018.1\|2288356_2290318_-\|penicillin-binding-protein-PBP4B	unknown	unknown	gnl\|CDD\|179620
NZ_CP054692.1\|WP_002701529.1\|2287166_2288360_-\|DUF1343-domain-containing-protein	unknown	unknown	gnl\|CDD\|377768
NZ_CP054692.1\|WP_002699726.1\|2277300_2277774_-\|chemotaxis-protein-CheW	unknown	unknown	gnl\|CDD\|238374
NZ_CP054692.1\|WP_002701535.1\|2285886_2286357_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002701550.1\|2282440_2282968_+\|dentilisin-complex-subunit-PrcB	unknown	unknown	gnl\|CDD\|379569
NZ_CP054692.1\|WP_024752009.1\|2269664_2270645_-\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239487
NZ_CP054692.1\|WP_024752017.1\|2286687_2287170_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|234860
NZ_CP054692.1\|WP_002701539.1\|2284876_2285245_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002701542.1\|2284365_2284827_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235846
NZ_CP054692.1\|WP_024752010.1\|2271056_2272253_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|372434

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002699714.1\|2268261_2269665_-\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	1.85058e-161
NZ_CP054692.1\|WP_024752019.1\|2290426_2292145_+\|potassium-transporter	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.24986e-92
NZ_CP054692.1\|WP_024752018.1\|2288356_2290318_-\|penicillin-binding-protein-PBP4B	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	4.55054e-133
NZ_CP054692.1\|WP_039943365.1\|2294651_2295944_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	7.42202e-161
NZ_CP054692.1\|WP_024752014.1\|2276274_2277297_-\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	2.84122e-48
NZ_CP054692.1\|WP_174897312.1\|2279991_2282067_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	6.47391e-52
NZ_CP054692.1\|WP_002701542.1\|2284365_2284827_+\|hypothetical-protein	gnl\|CDD\|235846	PRK06654, fliL, flagellar basal body-associated protein FliL; Reviewed.	5.18759e-12
NZ_CP054692.1\|WP_024752013.1\|2275389_2276262_-\|NAD(+)/NADH-kinase	gnl\|CDD\|223139	COG0061, nadF, NAD kinase [Coenzyme metabolism].	1.40201e-75
NZ_CP054692.1\|WP_024752012.1\|2273111_2274800_-\|DNA-repair-protein-RecN	gnl\|CDD\|223571	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair].	0
NZ_CP054692.1\|WP_024752020.1\|2293149_2293857_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	6.28896e-40
NZ_CP054692.1\|WP_002699726.1\|2277300_2277774_-\|chemotaxis-protein-CheW	gnl\|CDD\|238374	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea. CheW interacts with the histidine kinase CheA, most likely with the related regulatory domain of CheA. CheW is proposed to form signalling arrays together with CheA and the methyl-accepting chemotaxis proteins (MCPs), which are involved in response modulation.	5.67371e-47
NZ_CP054692.1\|WP_002701529.1\|2287166_2288360_-\|DUF1343-domain-containing-protein	gnl\|CDD\|377768	pfam07075, DUF1343, Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.	0
NZ_CP054692.1\|WP_002701550.1\|2282440_2282968_+\|dentilisin-complex-subunit-PrcB	gnl\|CDD\|379569	pfam14343, PrcB_C, PrcB C-terminal. This domain is found at the C-terminus of Treponema denticola PrcB. PrcB interacts with the PrtP protease (dentilisin) and is required for the stability of the protease complex.	1.83249e-13
NZ_CP054692.1\|WP_024752009.1\|2269664_2270645_-\|phosphatase-PAP2-family-protein	gnl\|CDD\|239487	cd03393, PAP2_like_3, PAP2_like_3 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria and archaea, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.10493e-18
NZ_CP054692.1\|WP_024752017.1\|2286687_2287170_-\|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl\|CDD\|234860	PRK00901, PRK00901, methylated-DNA--protein-cysteine methyltransferase; Provisional.	5.98843e-55
NZ_CP054692.1\|WP_148879026.1\|2285237_2285897_+\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	1.4682e-42
NZ_CP054692.1\|WP_024752010.1\|2271056_2272253_-\|HD-domain-containing-protein	gnl\|CDD\|372434	pfam13023, HD_3, HD domain. HD domains are metal dependent phosphohydrolases.	1.64558e-21

>NZ_CP054692.1|WP_002701550.1|2282440_2282968_+|dentilisin-complex-subunit-PrcB
MIKKHAVLFVGFVLISGISLYSYEENLLDLDAQSSATQKNEHFDAAYTILDSGVYSTVRYPKTVVIRNKKTWDKFLKNYNSRLNMAAPDFSKHAVIAVFAGEFSTGGYNLFVESIEKDDDDNELEISFKLSYPSPNETVTQAFTYPFIVVAVEISPHVKIDVDLPDTLEEKMKKF
>NZ_CP054692.1|WP_174897312.1|2279991_2282067_+|HAMP-domain-containing-protein
MIARFSLKNQPFLLVLPLSFFLIVFSLLWYYEASRIIKNNIADKLESQKKLYHKSIELFLTQRATIIATLGSVIALNNADTDEMLELCTGCDTAFHHMIFDVYLGFEDGRYIDSSGWKPPAAWDARKRPWYKKALKKKGVAFSEIYVDSVRNIPMVSISIPVMQNKDLLGVLTTNVDMSKLKEMMTKINQGNNTTGIFLLDENGKFLFHNTFTYSDVITEVENKKYANCIKQMFDKDITEFSTVINGEKYFFIKDHFSAVDWTLAIGIPYVDLYRDATNLRIKGNIFAAVFICFYIAVIWSIASRMTKQLKALVSALKNIAEGDADLTVRLPLIGNREITDLSRYFTQAIEKIRLSIKSVSENTDALRAVGENLANNVTETASAINQINMNIDNVKEQSLTQAASVSETAATIEEIIRTIKQHNTGIETQSASIIQSSSSVEQMITSIGQITETLEKTNTVIKDFASATEDGKNTVSESKAVMQKIAEESGGLLEASTVIQHIASQTNLLAMNAAIEAAHAGDAGKGFAVVADEIRKLAEESNTQGKTITTTLKALSEEIETLSNSAKKTEEKFNIIFELSGQVQHMSDRLMEAMQEQANGGAEVLTAIKNINSVTTDVREGSHEMLIGGQGIAEEMRKLDKLTRTITYSMNEMASRALQINAAIKDINEISQKNKESIVNLSVEVEKFKV
>NZ_CP054692.1|WP_002699726.1|2277300_2277774_-|chemotaxis-protein-CheW
MAMTDAQFQLVTFQLGEELYGVDIMDVKEIVKIQDVRPIPNAPYYVEGIFNLRSEIIPIISLHKRFHLKKAVLDAGDEYLGGFIILHIDNNKLGIIIDRVARVIMVKQGDVQPPPQMITGIGTEYIHGVVRQGSGYLIMLDIRKLFNPKELQKLANL
>NZ_CP054692.1|WP_024752014.1|2276274_2277297_-|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MKIPVYSSTIRRSEMDAVLTCMVEEKIGPGEANQKLIRLIKDSFQVEGAATFRSPAIALAYALRALGLEPGSGVLLSVLAPAWQFTEVQRQGFTPILVDVDAETALMTPSLIADGIQAGGKVVVLHEALGNLPNMQEVLSLNIPVIEDISQSAGAELGEKKSGCFGVFAILGLEERDILTAGGGAALLSAERRNALVLKKLYDVAPPTDILPDINASLAFVQLKQMEKNMQLRQELYELYVRFLMQGRHKTIAPAEGLKNPVYSFPVLLSSGYKDVKQFANKKGVETEPAFSGSIIDTFEKQEEYIQAASLLLRCVLFPLYPRLGMANAEKISKVLRSLP
>NZ_CP054692.1|WP_024752013.1|2275389_2276262_-|NAD(+)/NADH-kinase
MGTTDSRVIIITSTYKPHAVKLSKDIIKFLEARGFSCDQYEYDGMSSENPVKQDYAFAICLGGDGTVLFASRCCAARKIPVFAINFGNFGFIAVVEPEHWQTVLEDYLAGKIKIFERMLLSACILRKRQEFCVFDALNDVVISGSGIAKLVNLEVLFNDVSFGTYKADGVIISTPTGSTAYSAASGGPILDPNVSAFVLTPIAAFSLSNRPIVLPAEGKMTVKVLPTRHRDTILSVDGQELFVLEENDIVSVSASVHKAHLIGCNPEMFYRALRSKLAWSGNSTCPVPIR
>NZ_CP054692.1|WP_024752012.1|2273111_2274800_-|DNA-repair-protein-RecN
MIENIIVKNIALIDSLSLDFASGFNVLSGETGAGKSILIGALSFLLGGKAGTDILRTGAEEGWVSGSFYLDPQHKAATAWLAERDIEPENGRILLRRSIKQNGRSAAWIQSYPVARTDLEVFTSFLVDIHGQHDHQSLFKIAEHRRFLDAYAGLEEETAAFTALYTELSEKRAELEQLNISEKQLNEKIELLNFAVEEITKAKLKADEEQELEAEENKLLQYEKLYEHIEEADAVLTGERGAVSLLKKAINAFGAAAEIDGTLAENMQRLESAYYDLEDIASNVASYSASMSFDPARLEEVQERLSLIYKLKKKYGNTIAEVLEYCDKAQKELEQLVHNADSKTELESEIQKCTQRLFTSGKALSEKRAAAAKTLQTKVEAILAQLGMPKTKFEVQVQLKDKTGNKQTVGPYGFDSIEFLISPNPGEPLKSLAKIASGGELSRVMLALKTVLAAADEADTLVFDEIDTGIGGEVALAVSEHLKKLSEKKQILCITHLAIIAAHADTQIKIEKTSDGTSTRTSAFIIEGQKRTEEIARMLAGDEVSDVSQKHAQELLQKYGTA
>NZ_CP054692.1|WP_174897173.1|2272253_2273054_-|hypothetical-protein
MANEKNKFYTERLNSYQTEIEQLLVREKNILALISKDEFGKEYKKMMLVEEMLYLTTLYFAKYQLSIALIGGKNEDILNDARKTVYKAIIYLEEIVTNFIDVPFSDYKDKVEKIEKIGQRQRYYLIRKMGLVIDMIIDAYGNNTKWKWTFVELEARYATVAKNILDLKDSSATGLDPHSPDYDSTVFHLRLVKQLLAQAADRYREKYEMATFSIEDFRIAIQYLLALRRIHLILNEHEAAEEVKKKAEIWSDKMEKDHQKREARRK
>NZ_CP054692.1|WP_024752010.1|2271056_2272253_-|HD-domain-containing-protein
MFNKAIVLKLFEAFSIQRWNDLIRPFDMVEMDKTAEKMFLAYIIGKYEEKSGKVIDWNKIIDNAFFELLRKIALSDIKAPVQRIIRSEYPEEYQKLNLWVFKKYETLFSGTPLLDDFFAYLNEKSDYNDISLRVLRAAHKYSTIREFEMLKMVNEPFRLSKIAPVLEQDIEDFTDLRGMQLLITKRKPYALITEIEKLRFQIRWNQTPRVPETSVLGHSYFVAALTLLMSKTLGRSRHRTYNNFFGALFHDLPEAVTRDIISPVKQATEHLPDIVKDIEDKIVSEELVPLMDAFYRDEVLYYIQDEFENRILKGGKTCIVDYADLESKYAEPKYKAIDGALIRTADQIAAFVEADSSIEYGIKSDHLLEGRNKILQRYPKGTGVNGLAVDLFFNAYRN
>NZ_CP054692.1|WP_024752009.1|2269664_2270645_-|phosphatase-PAP2-family-protein
MEYFETVESAVHPVLLWGIEVIKTVQFIANPILTKITSILSFLGGEGIVLFALFFIWCIEYRKGLIIFLSLAISNGINSYLKNLFKVPRPFVVDPSVKLEFEKNFSTPSGHSQSSVVFWALLFFYHDESSEKTETKESPTHKKLKAVFMFLIPLYIGFTRVYLGVHYPTDVLFGWVIGAVLSVIALFLLPKILTAVTAFFASAKKISNRRLRGLELAVFALIAVLFVAFDSDPSMGGAVLGLAIGKIFLFDSYAAEFSAASGSVFQKILRYLVGLVLCVGGLLVLKQCFSFAPEEYTRLLRFLRYAIAAALVSGAAPILFLKLRLA
>NZ_CP054692.1|WP_002699714.1|2268261_2269665_-|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MNPSEYALDDDIAAIATALAPAALGIVRTSGKTCIERVSRFFSRPAALQKAPGNSIVYGWIIDAGKKLDEVVALVYRAPKSFTGENCIEIICHGGVQTVKSLYRLCLDSGFRAAEKGEFSFRSFINGKTDLTGAEAIAEIIGAKTLQAQTLAAGRLSGNLFAELQAIKEKLLTALAAIEVEIEYPEDEETIADAFDTALLEEPLTRLQELEASRAGEKIFQEGVRIVLAGKTNSGKSSLFNALLKEDRAIVSDIHGTTRDWLETDIDFSGIPVKLFDTAGIRETSDTIEAIGVQRSLDLLAEADAVFYLADGRTKLSPEDKDFIVQNTKPLIVVRSRAALMTDGEKDYALKEMRALSAQAKKEFSCICIDSKTMEGVGALVQTTAALITEGKPATSDISLGTERQKIAVQQAAAAAKHALHAARQGFPLDAIVQDIEESLAFLGEITGEVRSDDILDKIFSGFCVGK
>NZ_CP054692.1|WP_002701542.1|2284365_2284827_+|hypothetical-protein
MAEKNTCIHVLHLIVIILVGIIMIGTVAGLIKASAKQNEIAEEVPPIILQKEDALYGEIGRLRISSADSPPISVIVTPFLQYAKADIALQEELIRKKEILKKVIISWFEKKNAVQLSTFPPDKIKKLLLEELNKQLVLGKIKGIYFEELTLLN
>NZ_CP054692.1|WP_002701539.1|2284876_2285245_+|hypothetical-protein
MTHEAVPAAQIIIAIIPIVGIVTGGSVIFFYLLWRHKQIICQIENNIYIRPSFNLVAFCLLAGIMLTITGFVLTILFAIINGISYVLLGGLIPLAIGISFLSFFYYTTHIDAEILWKGDERA
>NZ_CP054692.1|WP_148879026.1|2285237_2285897_+|RNA-polymerase-sigma-factor
MLKKKILSNNDPKKEQQTQKKIDKEICKAVLNGNTQAFSVLVEKYQQQIYRLGMSFFKNEDDSKDFVQDVMLKAYTALGSFRGDSAFSTWLISIAYNTAINSMRRSQRFVSFAESFEIEAPGETPEERHINNCVKLSIREAVENLCEKYRVCIDLYFFYDMPYADISSITGLPVNTIKSHVFRAKKILREYLTEEQVLFRSNENPSSGIFAIFQLRYDL
>NZ_CP054692.1|WP_002701535.1|2285886_2286357_+|hypothetical-protein
MTCEKIIDTYLKLDKYERVPIGITLHLLRCRSCRETVKKLSKVYTQHRKKEKNPSPELVEDIMQNIYQLSEKPVQTETLSDAKILLWMLTGLLIVIGFIILPFTEIGQWGINHLGIAFIIPFALICAISVSAFYAVFVGKNIDFFVKQFDLPTSLQ
>NZ_CP054692.1|WP_024752017.1|2286687_2287170_-|methylated-DNA--[protein]-cysteine-S-methyltransferase
MNTIQTITVKSPIGVLRIEETGGVISSIGIHKENAPIVSCTSSSVLNHCVDELRAYFDGKLKRFTVPVIFLGTEFQQRVWKALQEIPYGQTQSYKELAELIGARKAYRAVGNAANKNPILIIVPCHRLIGSDGSLTGFACGIEAKRFLLEMEKDLQQALR
>NZ_CP054692.1|WP_002701529.1|2287166_2288360_-|DUF1343-domain-containing-protein
MKKLLCIFSLLCCTIFLFAEKIILGIERVYEHRHLFEGKRVGLITNQTGINAKGVSSIDILAEAVNLTALFSPEHGIRGDAREGAAIEDTIDAKTGLTVYSLYGKTKRPTEQMVQDIDILCFDIQDVGARFYTYIYTMAYAMEACAKFNKTFVVFDRPNPISGSAVEGTILDMEYRSFVGYYPIVQRHGMTVGELARLFNTEYKIQCTLHVIAMKNWDRNSYFNSLPLPWIPTSPNIPSAETALLYAGICVFEGTNISVGRGTTMPFQYIGAPFIDAPELADSLNRLNLSGLLFVPAYFTPSLSLHKNIPCKGVQIIVTDKAQCKPVYAGFVILYTIRELYQTDFKIINAPNKYCGLNLLTGTNKITENKLSLTELDALMQKDTKRFMRIRRRYLLY
>NZ_CP054692.1|WP_024752018.1|2288356_2290318_-|penicillin-binding-protein-PBP4B
MKKNVIFVLSILLTACASSPKIIVSPTTAPRFLSEQHEAEFQVDTVFPIDFSNYDDSILTNNFISFIGFSEQGKLYFTAKGIKNFNLYVNGYNINTKKICDQENTCIDISTITKNGKNILYIGNIQIVKKGDQKTETKPFLKLQIPYPEIIYKPTNIGTVDYRAFQLVDSIINAEVQNGFPGAQLVIVKDGKLLKSSSYGNISTVDIFGKPVKKPIPVTNSTLFDLASNTKIYAANFALQKLIYEQKISIHDRVVSFFPEFVDSKKAKFTGKKYITIHDLLTHQAGFPAGARYFAKISKPLTKTIRKKNSKGKIRYVIVVSDEVLSPRERTFRLIMETPLVYKPGTQVLYSDIDYLLLTFIIEKITKMPLDEYVTKNFYKPLNLNSICFEPLKHNFMLDEIAATAITGNTASSTDENKNLRRFLIHGTVHDEEAFHSMEQVSGHAGLFANAESLAVLAQVMLNRGGYGTIKLFDENTVSLFASQSYISPSYGLGWRRQGAQNYAWAFSPLADSNTVGHTGWTGTLTVIDPKKNLIIILLTNAKNTPYPDKKRSAVKTEGDYYLAKCYGAITTILYNAFENTDKDFFDFMLIELVEKKYAMLKAIKNFNNSGYIKDLRALMDTVKSSAKHSSKLRAFLKSPTGKAIEKKLESIK
>NZ_CP054692.1|WP_024752019.1|2290426_2292145_+|potassium-transporter
MKQKNGMLFLAASMSILLIILEEINSFSSVMYIAFGGNILILLLIGATILLPMKNEKYAKIFIQKNLLKLLTIILLIALFVLAKITSGIKTVNIYTLFNLIKNIFLLALVITAIRGQGKISKQAVTNPAQTLILSFLTVIIIGAYLLKFPISSSDHVGLSLLSSLFTATSAVCVTGSTVINVAEQLSGFGKLILILLIQIGGLGFMVLSFFGMLALRRKLSLQDKLIVSYMINEDDMSDLFKGLKVIIIATFTIEAISAFFLFFGFMQIEGFGIKALAYACFHAVSAFCNAGFSLYPNNMESFTGNYIIGLVIPCTIILGGISFVVISEMAMRSKRRIKNLFSAQKKALEPMSLNTYVVLKITAVVLIVSFSGFYLLEHEYAMKDYGLGTQYLASFFQAVTLRTAGFSSLPFGSFRQPTLFFMVFIMFLGGASGSTAGGIKLNTIAAIIASFKSFLKNEQHAKIRNMVLHIKQIEKAFLIFGFGLSVVCVGVFCLSITERFYFLPLLFETVSAFATVGLSTGITPELTVYGQLIIIVLMFIGRVGPLTILTAVSKPEPESNITYAYSSLAIG
>NZ_CP054692.1|WP_024752020.1|2293149_2293857_+|TrkA-family-potassium-uptake-protein
MSIKKNFVVIGLGAFGNKICEILTEGGGNVIAIDKNADTLDKVKNFVSAAILIDTTNEGDLLKAPLDDIDIAIVAIGDNIEASILTTTLLKQRGIPYIVARTISPLHATVLRRVGANEVLNIEVSSATSLARRLVAPDRTNSIAITEDVTIREIIAPKFFDDKTIDDLALRDKFNLKIIAAVRTEIDIDSAGNSIPKKKLYYPDNIFTFKSADRIFVLGKNHDIKELIFTSENLK
>NZ_CP054692.1|WP_039943365.1|2294651_2295944_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKIHPIAKELNEILEQTVAGKLLSNLGKRLFFPKGIIAQGAEVKLKAPNANATIGMMCKNKIPVELNALHDLLPAFSPSEIVAYTPTAGTETVRKLWYNNMLLKNPSLENKKISLPVLVPGLTAGLSFTLDLFLSSKDRLIVPQPAWDNYQLIAEARRNASTAAFPIFDGDNFNIKGFTSCVEREAKSGMLKILLNFPQNPSGYTPTEQEVDSMYSILFEQAEKGVAILIIFDDAYFGLEYESEAIKESLFVRFADAHKNILAVKIDGPTKEDYVWGLRTGFITFASKGFNDIHYETVIKKLLGAIRSSVSCSATPSQTFAVKILENEKTDSEIQNLHTLLNDRYKEVKRVLKKFSSSEKLKPLPFNSGYFMCMHCSGFNAETLRQKLLNEYQIGVVAVDDCHIRIAFSSLDIENIEPVYTAIFEAAENL

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Crispr_ID: NZ_CP054692_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_13

2302848-2302960

Orphan

Consensus_repeat	Method
CTGCGTGGAACCACCGCCGTCCATGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_13

>merge|NZ_CP054692|13|2302848-2302960|CRISPRCasFinder
CTGCGTGGAACCACCGCCGTCCATGGCAAAATTATACCGTGCGAGTTTTAAAGCTTTGTAAACTATTTTGCTTTAAAACGTCGTTTCTGCGTGGAACCACCGCCGTCCGTGGC

>NZ_CP054692|13|13|2302848-2302960|CRISPRCasFinder
CTGCGTGGAACCACCGCCGTCCATGGC	AAAATTATACCGTGCGAGTTTTAAAGCTTTGTAAACTATTTTGCTTTAAAACGTCGTTT
CTGCGTGGAACCACCGCCGTCCGTGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002701513.1\|2296008_2297001_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|285027
NZ_CP054692.1\|WP_039943365.1\|2294651_2295944_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181512
NZ_CP054692.1\|WP_148889655.1\|2298219_2298531_-\|anti-sigma-factor-antagonist	unknown	unknown	gnl\|CDD\|132914
NZ_CP054692.1\|WP_024752026.1\|2303045_2304530_-\|transposase	unknown	unknown	gnl\|CDD\|227708
NZ_CP054692.1\|WP_024752034.1\|2320427_2321972_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP054692.1\|WP_174897174.1\|2314924_2318533_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP054692.1\|WP_024752025.1\|2300697_2302167_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP054692.1\|WP_024752029.1\|2310567_2311758_+\|dicarboxylate/amino-acid:cation-symporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP054692.1\|WP_044634916.1\|2313236_2314436_-\|methionine-gamma-lyase	unknown	unknown	gnl\|CDD\|168478
NZ_CP054692.1\|WP_024752020.1\|2293149_2293857_+\|TrkA-family-potassium-uptake-protein	unknown	unknown	gnl\|CDD\|223643
NZ_CP054692.1\|WP_024752033.1\|2318917_2320414_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|225533
NZ_CP054692.1\|WP_024752027.1\|2304939_2307690_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP054692.1\|WP_024752028.1\|2308138_2309914_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP054692.1\|WP_039943366.1\|2297801_2298206_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NZ_CP054692.1\|WP_024752022.1\|2296963_2297809_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350624
NZ_CP054692.1\|WP_174897313.1\|2298561_2300220_-\|PP2C-family-protein-serine/threonine-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_CP054692.1\|WP_024752030.1\|2311887_2313087_+\|threonine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236182
NZ_CP054692.1\|WP_024751799.1\|2322881_2323829_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP054692.1\|WP_024752018.1\|2288356_2290318_-\|penicillin-binding-protein-PBP4B	unknown	unknown	gnl\|CDD\|179620
NZ_CP054692.1\|WP_024752019.1\|2290426_2292145_+\|potassium-transporter	unknown	unknown	gnl\|CDD\|273349

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002701513.1\|2296008_2297001_+\|AAA-family-ATPase	gnl\|CDD\|285027	pfam07726, AAA_3, ATPase family associated with various cellular activities (AAA). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model.	5.58739e-89
NZ_CP054692.1\|WP_039943365.1\|2294651_2295944_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181512	PRK08637, PRK08637, hypothetical protein; Provisional.	7.42202e-161
NZ_CP054692.1\|WP_148889655.1\|2298219_2298531_-\|anti-sigma-factor-antagonist	gnl\|CDD\|132914	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.	2.53772e-18
NZ_CP054692.1\|WP_024752026.1\|2303045_2304530_-\|transposase	gnl\|CDD\|227708	COG5421, COG5421, Transposase [DNA replication, recombination, and repair].	2.41428e-14
NZ_CP054692.1\|WP_024752034.1\|2320427_2321972_+\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	2.72909e-120
NZ_CP054692.1\|WP_174897174.1\|2314924_2318533_-\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP054692.1\|WP_024752025.1\|2300697_2302167_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.13364e-45
NZ_CP054692.1\|WP_024752029.1\|2310567_2311758_+\|dicarboxylate/amino-acid:cation-symporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	6.91226e-76
NZ_CP054692.1\|WP_044634916.1\|2313236_2314436_-\|methionine-gamma-lyase	gnl\|CDD\|168478	PRK06234, PRK06234, methionine gamma-lyase; Provisional.	0
NZ_CP054692.1\|WP_024752020.1\|2293149_2293857_+\|TrkA-family-potassium-uptake-protein	gnl\|CDD\|223643	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism].	6.28896e-40
NZ_CP054692.1\|WP_024752033.1\|2318917_2320414_+\|histidine-ammonia-lyase	gnl\|CDD\|225533	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism].	5.07692e-152
NZ_CP054692.1\|WP_024752027.1\|2304939_2307690_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP054692.1\|WP_024752028.1\|2308138_2309914_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP054692.1\|WP_039943366.1\|2297801_2298206_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	0.00150067
NZ_CP054692.1\|WP_024752022.1\|2296963_2297809_-\|M15-family-metallopeptidase	gnl\|CDD\|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	1.17207e-64
NZ_CP054692.1\|WP_174897313.1\|2298561_2300220_-\|PP2C-family-protein-serine/threonine-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	7.91764e-44
NZ_CP054692.1\|WP_024752030.1\|2311887_2313087_+\|threonine-ammonia-lyase	gnl\|CDD\|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_CP054692.1\|WP_024751799.1\|2322881_2323829_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	8.56589e-112
NZ_CP054692.1\|WP_024752018.1\|2288356_2290318_-\|penicillin-binding-protein-PBP4B	gnl\|CDD\|179620	PRK03642, PRK03642, putative periplasmic esterase; Provisional.	4.55054e-133
NZ_CP054692.1\|WP_024752019.1\|2290426_2292145_+\|potassium-transporter	gnl\|CDD\|273349	TIGR00933, Trk_system_potassium_uptake_protein_trkH., potassium uptake protein, TrkH family. The proteins of the Trk family are derived from Gram-negative and Gram-positive bacteria, yeast and wheat. The proteins of E. coli K12 TrkH and TrkG as well as several yeast proteins have been functionally characterized.The E. coli TrkH and TrkG proteins are complexed to two peripheral membrane proteins, TrkA, an NAD-binding protein, and TrkE, an ATP-binding protein. This complex forms the potassium uptake system. [Transport and binding proteins, Cations and iron carrying compounds].	1.24986e-92

>NZ_CP054692.1|WP_024752025.1|2300697_2302167_-|SpoIIE-family-protein-phosphatase
MIRRRTLLAKVLFFATISVVFAVFLIFLSPRYSFLGRLVSARDMALLITNYESFSEFTLRDKFFLASFIFMIFALTASGISEYISSQIKKNVYLQTETALFNNFIERLRFCYRHEELVAAIQEELEYQADCAVLLANTKTEHVIYNSTSAFISDPETYDLMRRRFSTDWTWYWAEGLYFFDTNMQLVGDKRKARGLFIASGDIRFFLICRFIRNTEPEIFPILLHEFNDYLNREKTLGQLLYYSQLFQEWSMVANTQRSFLPKKLPDTTSIEVGAYFQPLVHVSGDYYDIIKIDEDKTLLVTGDVSGKGLAAALVMGIIMNTIQIIENKEDLAGIIYAIDTAIKRMKLQDKYTVLFLGLIDTKKMTIKYVNASMEKPFILTESRPTFKVKTLESNCSVVGIIDLDEVIVEERPLYHGDVILMLSDGIPETMDANGIELGETDYYLDSIKEFAHNPPAEMVKNIADMALSFSANNAMRDDVTIVAVKLKR
>NZ_CP054692.1|WP_174897313.1|2298561_2300220_-|PP2C-family-protein-serine/threonine-phosphatase
MVKAFKIKSNIYRQQLILIAFSVLAALISWIVIVRLFAFFPWVFSLFPIGILCVLFISQAAFSLTSVFDLKQILLSFARFIFFTLMFALTAGLAAAFIVQTSPTLRMLLLGGIITSFILFITRDFITKKFAFLLGDTSDYESKLTEELQQFDYTLGRDSILQSFVELMKTRIDCCGLGILITDENGVFKTVYSDFEKRLSIPTGKKCFAFLMNRNVSVITKTEIVANYIYENIKSEMLDVFTEMDAQTIILIREGQKLIGCIGLGAKNRGAEYNQYDIRVLRNIYSYFFLIIYYLSNIAKQDIILTVDREVEMSDQIIGSIQKNMDKIENKAITVGSVSYSAQQLGGDFIDFIKLTEDRFLFLIGDVAGKGLAASMSMVILKSVIHTFLQETGDFKKLIIKINSFVKDNLPRGTFFAGLFGIIDFPTNTVYYLNCGIPLMAMYIQTYQNVIEVQGEGRVLGFVKNIAPFLKVRKITLHPKDVVVFTTDGVLEAQNLRGDRFGNDRVNRILQANKDKNTEEIAKDIYSGLLDFISNEIQDDVTILVMKNNEKP
>NZ_CP054692.1|WP_148889655.1|2298219_2298531_-|anti-sigma-factor-antagonist
MESVQITEKITPDYILLSVVGSINSYTYQEFESKIYSSIKENNIVLELSNVTNMSSSGLGVLMSAHDEGEEHGHKLYILAPSEIVRLAIDSTGFSEMLPSFTL
>NZ_CP054692.1|WP_039943366.1|2297801_2298206_-|ATP-binding-protein
MSRVCRLTVTPDTKHLAQLEALIETSPAIPDNKRMNILIIVTEMFDNIAEHALIPDGQSVTMEIKISKQNTIVTFIYKTKNFEELLEGVHTGRPHFDKNAKRYRGLGLIMSKNLSQKVKYKKSIFNTARLIFYV
>NZ_CP054692.1|WP_024752022.1|2296963_2297809_-|M15-family-metallopeptidase
MYKKRIGLCFLICIFFAGYSKAHSDDSFQKEKNTMIPLTVSPAEKIFVAPSSIPKKIIENIIQNQKEFIFELSEVLAEEKEYLLILVDKQHPLPDGYTPKNLVALTNTRAYAINRSDLSLTKTAEEALHIMARAARKDGVTLLVSSSYRSYLYQVNLFARYVRESGEKAAERFSARPGTSQHQLGTVVDFGSITNEFANTRAGKWMEAHAGNYGWSLSFPKDYETVTGYVWESWHFRYIGIKACRLQKKWFNDIQQYMLEFIDAWKRQVVTAEEQPKAISE
>NZ_CP054692.1|WP_002701513.1|2296008_2297001_+|AAA-family-ATPase
MEMQKPVEIIQRFKQEMKKTIIGQDALIEGILTAYIAKGHVLLEGVPGLAKTLIVKTFASIVGLDFKRIQFTPDLLPADLIGTLIFNQAQADFSVKKGPIFANIILADEINRAPAKVQSALLEAMAEGQVTIGEKTYILPEPFFVLATQNPIEQEGTYPLPEAELDRFFAKLFVPYPSFEEEKKIITGFSDIVTNAESERQDTIKILSKEELGVLQTAAHAIHCDETLVEYIASIVAATRPITEKSDTVTKGSYLSYISFGASPRAGIALYKAAKIKALFSERDYVTPQDIKDCAPAILRHRLKLSYEAIADNLSADDIILKLLSVVPQP
>NZ_CP054692.1|WP_039943365.1|2294651_2295944_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKIHPIAKELNEILEQTVAGKLLSNLGKRLFFPKGIIAQGAEVKLKAPNANATIGMMCKNKIPVELNALHDLLPAFSPSEIVAYTPTAGTETVRKLWYNNMLLKNPSLENKKISLPVLVPGLTAGLSFTLDLFLSSKDRLIVPQPAWDNYQLIAEARRNASTAAFPIFDGDNFNIKGFTSCVEREAKSGMLKILLNFPQNPSGYTPTEQEVDSMYSILFEQAEKGVAILIIFDDAYFGLEYESEAIKESLFVRFADAHKNILAVKIDGPTKEDYVWGLRTGFITFASKGFNDIHYETVIKKLLGAIRSSVSCSATPSQTFAVKILENEKTDSEIQNLHTLLNDRYKEVKRVLKKFSSSEKLKPLPFNSGYFMCMHCSGFNAETLRQKLLNEYQIGVVAVDDCHIRIAFSSLDIENIEPVYTAIFEAAENL
>NZ_CP054692.1|WP_024752020.1|2293149_2293857_+|TrkA-family-potassium-uptake-protein
MSIKKNFVVIGLGAFGNKICEILTEGGGNVIAIDKNADTLDKVKNFVSAAILIDTTNEGDLLKAPLDDIDIAIVAIGDNIEASILTTTLLKQRGIPYIVARTISPLHATVLRRVGANEVLNIEVSSATSLARRLVAPDRTNSIAITEDVTIREIIAPKFFDDKTIDDLALRDKFNLKIIAAVRTEIDIDSAGNSIPKKKLYYPDNIFTFKSADRIFVLGKNHDIKELIFTSENLK
>NZ_CP054692.1|WP_024752019.1|2290426_2292145_+|potassium-transporter
MKQKNGMLFLAASMSILLIILEEINSFSSVMYIAFGGNILILLLIGATILLPMKNEKYAKIFIQKNLLKLLTIILLIALFVLAKITSGIKTVNIYTLFNLIKNIFLLALVITAIRGQGKISKQAVTNPAQTLILSFLTVIIIGAYLLKFPISSSDHVGLSLLSSLFTATSAVCVTGSTVINVAEQLSGFGKLILILLIQIGGLGFMVLSFFGMLALRRKLSLQDKLIVSYMINEDDMSDLFKGLKVIIIATFTIEAISAFFLFFGFMQIEGFGIKALAYACFHAVSAFCNAGFSLYPNNMESFTGNYIIGLVIPCTIILGGISFVVISEMAMRSKRRIKNLFSAQKKALEPMSLNTYVVLKITAVVLIVSFSGFYLLEHEYAMKDYGLGTQYLASFFQAVTLRTAGFSSLPFGSFRQPTLFFMVFIMFLGGASGSTAGGIKLNTIAAIIASFKSFLKNEQHAKIRNMVLHIKQIEKAFLIFGFGLSVVCVGVFCLSITERFYFLPLLFETVSAFATVGLSTGITPELTVYGQLIIIVLMFIGRVGPLTILTAVSKPEPESNITYAYSSLAIG
>NZ_CP054692.1|WP_024752018.1|2288356_2290318_-|penicillin-binding-protein-PBP4B
MKKNVIFVLSILLTACASSPKIIVSPTTAPRFLSEQHEAEFQVDTVFPIDFSNYDDSILTNNFISFIGFSEQGKLYFTAKGIKNFNLYVNGYNINTKKICDQENTCIDISTITKNGKNILYIGNIQIVKKGDQKTETKPFLKLQIPYPEIIYKPTNIGTVDYRAFQLVDSIINAEVQNGFPGAQLVIVKDGKLLKSSSYGNISTVDIFGKPVKKPIPVTNSTLFDLASNTKIYAANFALQKLIYEQKISIHDRVVSFFPEFVDSKKAKFTGKKYITIHDLLTHQAGFPAGARYFAKISKPLTKTIRKKNSKGKIRYVIVVSDEVLSPRERTFRLIMETPLVYKPGTQVLYSDIDYLLLTFIIEKITKMPLDEYVTKNFYKPLNLNSICFEPLKHNFMLDEIAATAITGNTASSTDENKNLRRFLIHGTVHDEEAFHSMEQVSGHAGLFANAESLAVLAQVMLNRGGYGTIKLFDENTVSLFASQSYISPSYGLGWRRQGAQNYAWAFSPLADSNTVGHTGWTGTLTVIDPKKNLIIILLTNAKNTPYPDKKRSAVKTEGDYYLAKCYGAITTILYNAFENTDKDFFDFMLIELVEKKYAMLKAIKNFNNSGYIKDLRALMDTVKSSAKHSSKLRAFLKSPTGKAIEKKLESIK
>NZ_CP054692.1|WP_024752026.1|2303045_2304530_-|transposase
MSIPKSIKQFRPTQFGAVEIRFIGNYYYVYQVSSKWDGAKGRAQKVTGKSIGKITEADGFIPNANGLRLMQQMRSTADVAPTVKNYGAYELLQQLALELNDKLKQHFPDIFREIRTIALLRLVGSICSAKMIQPLFLDSYMSTLCTDIAVSEASVRKFITLLGSLQEQADAFMRDQVMPANALLFDGTSIFTRSADSLAAKGYNPQHSRGTQARILYVFEKNSHKPVFYRVLQGSIVDKVAFMETVHAAGCKDCIIIADKGFYSKENLAALMNAGLQFILPLRKDTVNVEPAFYENTDDSKWDGVFTYNKRPIWFRKKTSGTKGNFIYTYRDDSRKAELVGQYVEKVEKFYGERTHEPKDVLKKIRMGYFSFCSNLDVSARDIYMNYKERWDIEQCFDYLKNSVSQSASHAHTDEYFRGWAFVNHISLLYYYGLLNALRNSKLDEQYSASDVLKLTKNIYLVDSGDNQGFKLSAIQKRTQRILDTLGIELLCNN
>NZ_CP054692.1|WP_024752027.1|2304939_2307690_-|preprotein-translocase-subunit-SecA
MLADTIIKFFFGSQHERDLKALLPILHKINAKEAWALRLSEADFKQKTADFKERFQKGESLDDFVPEAFAMAREAARRILGERPYDVQMLGSLVLHSGRIVEMKTGEGKTLMSVAAAYLNSLSGKGVHVVTVNDYLAERDTEWMRPVYEYLGVSVGTILSNMDNDARKIAYNCDITYGTNNEFGFDYLRDNMQLSLDEKTQRGFSFAIVDEIDSILIDEARTPLIISGSAEDDTQRYFEVDKLINQLTEVQKNPETGEYPNEVEGEEVIGDYIIDEKSKRVSFSGPGMLHIQDILLNQGLIQGSLFDEENFEYIHYFTQSVRAHILYHIDVDYVVKDGQVQIVDEFTGRILEGRRYSDGLHQAIEAKEHIRIAQRNRTMATVTFQNFFRMYDKLSGMTGTADTEAVEFNKIYKLDVVVIPTNLPVARKDEHDVIYMNEDEKWAALCDEIADAYKRGQPVLVGTVSIEKSEKLSALLTRKGVRHEVLNAKNHAREALIIAEAGAKGSITIATNMAGRGTDIKLGGNPEFRAKKRAGTEATHEEYLRAYEDEYKKWQDEYEKVKELGGLYVIGTERHESRRIDNQLRGRSGRQGDPGRSKFFLSLDDDLMRLFGGESLKRFMGKVGMEPGEPIEHPWLNKSIEKAQTKVESRNFDIRKHLLEYDDVLNEQRSFIYEQRDSILADSNLSERIYVTILEYLDEGFADLKGGSKKEKEEVITAFQAELKRLFNYTLDAEDIPLLDSKEAESVKTKIFEAIKANIEEKIALAGAENINMFLRYQYLQAIDKKWLDHLENLESLREAVYLRSYGQKNPLTEYKLEGFDIFYSMLDEIRLSIASRMALVTVRTDDDSSAGRQVRRRQGTAQHNSMEAFHSHGASPMGASSQPDKVQVVRTMPKVGRNDPCPCGSGKKYKHCCGR
>NZ_CP054692.1|WP_024752028.1|2308138_2309914_-|ABC-transporter-ATP-binding-protein
MKDYTDKIKTSVLIKRFLPYFRKYYGVLALDLTCAFFTTLCEIVFPLMVRNITNKAIWDISTLTMDFVIKICIIYFLLRLVDTAANYYMASVGHIMGAKIEKDMRRDLFAHLQKLSFSYFDNTKIGQIMGRITSDLFEIAEFAHHCPEEFFIAGVKILISFIILCQANILLTVIVFSVIPLMIISTVYFRRRMRLAFKRSREQIGDLNARVEDSLLGVRVVRSFANEETEEQKFERGNNGLLNIKRYQYRYMAGFKAVTQFFDGLMYVTVLLCTAYFLIKGKITAGDMIAYMLYVSMLLASIKRIVEFAEQFQRGMTGVERFIEIMDAKVEITDREGATEIKDAKGDILFDKVSFQYPEHDKVVLSNIDLHVRPEQKIALVGPSGGGKTTLCNLIPRFYEVSKGRILLDGKDIRDITQESLRSQIGVVQQDVYLFSGTVSENIEYGKIGASREEIIEAAKKAGAHDFIMELEDGYDTCVGERGVKLSGGQKQRISIARVFLKNPPILILDEATSALDNENERIVQKSLETLAKGRTTFTIAHRLTTIRNADTILVLTENGIEESGSHETLMKKKGRYYSLYQLYGQGYFEE
>NZ_CP054692.1|WP_024752029.1|2310567_2311758_+|dicarboxylate/amino-acid:cation-symporter
MKKFGLLPRLILAIVLGIVIGFVAPLPVVRTLATFNGLFGNFLSFVIPLIIVGFVAPGIADLGSGAGKSLAITAGLAYGSTITFGTLAYIAGSIFLPIFTRGGSMHVFEQTDAVTPFFNSPMPPIFGVTTALILSFILGVGIASLGEKRDALKNMVHEFADIVTKLIKIIVIPLLPVHICGIFATMAHEGTVARVMSVFAKVFILIIIMHWLTIFIQYTLASLIGGGNPFSKIRVLIPAYLTAIGTQSSAATIPVTLAQTIKMGVNKGVAEFVIPLCATIHLSGSTITLLTCSMTIMFLNGMDTSFTAIFPFILMMGVTMVAAPGVPGGAVMAAIGIMESMLGFDKSMIALMIALYLAQDSFGTACNISGDGAIACIVNKINGYKLTPGQKTELVK
>NZ_CP054692.1|WP_024752030.1|2311887_2313087_+|threonine-ammonia-lyase
MINLQMIHEARQKVSEIINATPIFTASRLGDNIYIKMENLQKTGSFKIRGAYNKISNLTDEEKKKEVIACSAGNHAQGVALSATKQGIKSYICVPSVTPLSKIDATKGYGGEVIVVEGSFDDAMKRALELKEEHNYTFIHPFDDEYVIAGQGTIGLEILEQLEDIENIIVPIGGGGLISGIALAVKETNPKVKIIGVEPENAASMRDSIKANKRMLLDSVNTIAEGVAVKIPGEQTFALVKKYVDEIVTVSESEISNSILRLLEEGKTTAEGAGACSIAAAISDKYSFKGKTVCVLSGGNINVNMISKIIKTGLFGSGRLTEVVTTLVDKPGELVKILEIVKKCGANVLNINQYSESSHMQLNTMVVRIVLETFNETHQRAVWQALRDAGYEHFREAIY
>NZ_CP054692.1|WP_044634916.1|2313236_2314436_-|methionine-gamma-lyase
MDKDELKNMGFASKQIHAGYTKNTYGALATPIYQTSTFVFDSAEQGGRRFALEEAGYIYTRLGNPTTSAVEEKLACLENGEACVATSSGIGAISSSLWTLVSAGDHIVAGKTLYGCTFSLLSRGLTRFGVDVTFIDTRDPENLRKAMKPNTKVVYLESPANPNMYLCDIQALSAIAHQNSDCKVIVDNTYMTPYLQRPLNLGADIVVHSATKYLNGHGDVIAGFAVGKKDVIDQIRFLGIKDMTGSVLGTFEAYLIGRGMKTLDIRMEKHCANAQKVAEFLETHPTVESIAYPGLPSFPQYELAKRQMALPGAMIAFTVKNGLEAGRKLMNSVKFATLAVSLGDAETLIQHPASMTHSPYTAEERAASDIAEGLIRISVGLEDAKDIIDDLRQALNTLI
>NZ_CP054692.1|WP_174897174.1|2314924_2318533_-|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MQKKTQTMTGNNAASYVAYAFTDVAAIYPITPSSDMAELIDSWSANGKKNIFGQTVLVSELESEAGAAGAMHGALSAGALAASFTASQGLLLMIPNMYKMSGELLPGVLHVSARALSSHALSIFGDHQDVMACRQTGFGMLASGSVQEIIDLGGIAHLAAIKGRVPFMHFFDGFRTSHELQNVELIDYEDFAKMIDWKALNDWRTTAMNPEHPFTKGTAQNPDIYFQAAEASNRFYIDAVEIVADYMKQISSLTGRTYKPFDYHGAADAERVIVAMGSITETAEETVDYLVSQGEKVGLIKVRLYRPFSPQYLFEVMPKTVKKIAVLDRTKEKGALYEPLHLDILGAYIDVPNKPIIVGGRYGLASKDTTPTMVKSVFDNLKSDTPKNNFSVGIEDDITHLNLPMPEEIKTEPTGNIRCKFWGFGSDGTVGANKSAIKIIGDSTGMYAQAYFAYDSKKSGGVTVSHLRFGKKPIKSAYLISDADFISCSKQSYVHQYDLLKGLKKGGTFLLNCLWSDAELENTIPAAMKKFIAKNDIKFYTINATEIAQKIGLGHRINMIMQSAFFKLAEIIPIEQAVESLKSSILSTYGKKGDDIVKMNYTAVDMGIESPHQVTVPKSWADAEDKSIDNAHLPPYIRNILVPINRLEGDRLKVSAFKGVEDGRMPNCTSRFEKRGIAVEVPHWIKENCIQCNQCSFVCPHAVIRPFLLNEKENSAKPQAFETIKANGKGLEDMTYRMQVSVLDCTGCSNCANICPAKNKALVMKPLAEEEAQAANWDFAVDEVSNKHGVMDQFSVKGSQFKQPLLEFHGACAGCGETAYATLVTQLFGDRMMIANASGCSSIWGGSYPTAGFSYNEKGKGPTWASSLFEDNANYGYGMALGTRKLREQAEDYMKKFLELNVGTDFTPLFKEWIENKKNLAANVITCDKIKALFDKHQKPVNQIIKNTPEADYLPKPESHVFKYDTGNIEADRLLEYIYKLKDFLVKKSVWSFGGDGWAYDIGYGGLDHTMASGEDFNILVFDTEVYSNTGGQSSKSTPTAAVAKFAAGGKRMRKKDLGAMLMTYGYVYVAQVSLGANMNQLVKALKEAESYDGPSIVLCYAPCVNHGLRSGMGRSVEQEKKAVEAGYWHLYRFDPRLKKEGKNPFQLDSKEPTASFQDFINSEVRYTSLKKTFPDVADELFLKAEEDAKDRYDRYKKMAQN
>NZ_CP054692.1|WP_024752033.1|2318917_2320414_+|histidine-ammonia-lyase
MDTLLLTGTPLSLDDVYSVAYDRRSVEISEEAEKRVQTARQILFDMAAEGKPVYGLNRGVGWNKDKEFDSEFFATYNRNLLNSHCLGVKPYHTDEQVRAILLLRLNKALTGHTGISAELLYHYRDFLNYGIHPKIPMRSSIGEGDITTLSHIGLAFIGEEDVSFNGETMNSRVAMEKVGLKPAKLGPKDGLSIVSCNAQGEAMTAIVLKEIEDVIQISNLIFCLSLEGLNGVVQSLREDVNAVRGIKGQIKAAKMCREFLKGSFLYDFDPERALQDPLSFRCAHAVNGSMYDAMEYVKEQLLITMNTTDDNPCILIDEHTAFVSANFEITSLAIGVEMLATALSHISKTSCYRMIKLADPAFTKLNRFLTPEDVKTIAFGTIQKTFTMLDSQNRGLANPSSMDFYSLAGTIEDHASNLPLACYKIFQMIDNIYYIIGIEAMHAAQAIDLRKNYKLGTGTKKAYALIREVLPFYSEDRNLSKDIEKIYEFIKSKKLLHI
>NZ_CP054692.1|WP_024752034.1|2320427_2321972_+|BCCT-family-transporter
MAENQKKEIRWAVFIPALAFVLIAAITGIVSNETLTSVSNSFFAWSLESFGWLYQITLIAVLIITCVIMFSKLGSVRIGGKDAKPKYSFGTWFAMTLTGGVATGIVTWGVNEPIIYLGNIWGELDAVGITPGTPEAARFAMGRCFYNWTFIPYAIYALAGVVVAYVYFNKKQQLNVTSTLEPLFGEKIKKGIIANIIDTLSMLAIAIGLCTALTMCITLITTGLNASYGVTNNLKLFVIVGVLIVAMFTLSSYVGLDNGLKKLAGINAYFYYGLLLLLLVTGPTLYIVRNTTAGMAVWLDKFWLWGLDPIDIGGAPLTRSWTLFDFAFWVAYAPVTGIFLGQISYGRTIRECLIVNLVLPSVFGIIWFGVWGSTAMNMQLTGQLDLVAIIQNSNAVMGLFEFIKNMPLAVILVPVNLFVILISFVTAADATANNVASMCIKNIPIGSEAPRYLKALWGIIIGIIAIVMAAFGGGEQGVAGVKSLAAAGGFIVLFIFILQVISAVKMFFVDKIVE
>NZ_CP054692.1|WP_024751799.1|2322881_2323829_+|sugar-ABC-transporter-permease
MQKKLKEAKGKRHFFDESFELALLSLPTTIWYFLFSFLPMFGVIIAFKNYRIFGPGFIGNLIKSKWVGFDNFAFLFKTKNAWLIVRNTLGFNAIFIVLGIVIPISLAVLLSLLYNQRLGKIYQTMMFLPHFLSWVVVSYFLYAFLNAQNGLFNHLIVKYGGTPIQWYAEKAYWPWILIFMSVWKGMGYGTVMYLAAITGIDKSLYEAAYLDGASRWQGVKYITIPSLKSLVIILFIMSLGGIFRADFGLFYQVPMNSAFLYDITTVFDTYVYRAIGTVNIGMSAAAAFFQSIMGFILIFSSNFLIRKLDRNAALF

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Crispr_ID: NZ_CP054692_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_14

2362055-2362144

Orphan

Consensus_repeat	Method
TTTTGACACGGACGTCAAAAACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_14

>merge|NZ_CP054692|14|2362055-2362144|CRISPRCasFinder
TTTTGACACGGACGTCAAAAACTCAGAACCGCCACGGATGGCGGTGGTTCCAAGCAGACGGTTTAGTTTTTGACACGGACGTCAAAAACT

>NZ_CP054692|14|14|2362055-2362144|CRISPRCasFinder
TTTTGACACGGACGTCAAAAACT	CAGAACCGCCACGGATGGCGGTGGTTCCAAGCAGACGGTTTAGT
TTTTGACACGGACGTCAAAAACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_024751814.1\|2351914_2352643_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_CP054692.1\|WP_044634368.1\|2377552_2378272_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751818.1\|2360587_2361769_+\|IS630-family-transposase	unknown	unknown	gnl\|CDD\|315923
NZ_CP054692.1\|WP_002695094.1\|2355925_2356636_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|199892
NZ_CP054692.1\|WP_174897180.1\|2368786_2368933_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148879847.1\|2364524_2365127_+\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP054692.1\|WP_024751816.1\|2354294_2355704_+\|alpha-L-fucosidase	unknown	unknown	gnl\|CDD\|376461
NZ_CP054692.1\|WP_039943845.1\|2374239_2376081_-\|flavocytochrome-c	unknown	unknown	gnl\|CDD\|273816
NZ_CP054692.1\|WP_044634937.1\|2366880_2368611_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP054692.1\|WP_174897181.1\|2372491_2373703_+\|aminoacetone-oxidase-family-FAD-binding-enzyme	unknown	unknown	gnl\|CDD\|367519
NZ_CP054692.1\|WP_002697897.1\|2352639_2353164_-\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|223877
NZ_CP054692.1\|WP_148879039.1\|2350634_2351555_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002697901.1\|2351561_2351918_-\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|376502
NZ_CP054692.1\|WP_024753296.1\|2376619_2376994_+\|30S-ribosomal-protein-S12	unknown	unknown	gnl\|CDD\|235355
NZ_CP054692.1\|WP_002697896.1\|2353182_2353416_-\|KH-domain-containing-protein	unknown	unknown	gnl\|CDD\|224750
NZ_CP054692.1\|WP_024751815.1\|2353434_2353683_-\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|234588
NZ_CP054692.1\|WP_174897178.1\|2356857_2360133_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP054692.1\|WP_002698755.1\|2377005_2377476_+\|30S-ribosomal-protein-S7	unknown	unknown	gnl\|CDD\|235398
NZ_CP054692.1\|WP_024751819.1\|2362197_2363703_-\|IMP-dehydrogenase	unknown	unknown	gnl\|CDD\|180842
NZ_CP054692.1\|WP_174897179.1\|2365165_2366881_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024751814.1\|2351914_2352643_-\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	2.32264e-142
NZ_CP054692.1\|WP_024751818.1\|2360587_2361769_+\|IS630-family-transposase	gnl\|CDD\|315923	pfam13358, DDE_3, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	1.41425e-24
NZ_CP054692.1\|WP_002695094.1\|2355925_2356636_-\|hypothetical-protein	gnl\|CDD\|199892	cd07184, E_set_Isoamylase_like_N, N-terminal Early set domain associated with the catalytic domain of isoamylase-like (also called glycogen 6-glucanohydrolase) proteins. E or "early" set domains are associated with the catalytic domain of isoamylase-like proteins at the N-terminal end. Isoamylase is one of the starch-debranching enzymes that catalyze the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminal domain of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase. This domain is also a member of the CBM48 (Carbohydrate Binding Module 48) family whose members include pullulanase, maltooligosyl trehalose synthase, starch branching enzyme, glycogen branching enzyme, glycogen debranching enzyme, and the beta subunit of AMP-activated protein kinase.	1.55288e-07
NZ_CP054692.1\|WP_148879847.1\|2364524_2365127_+\|TetR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.15394e-12
NZ_CP054692.1\|WP_024751816.1\|2354294_2355704_+\|alpha-L-fucosidase	gnl\|CDD\|376461	pfam01120, Alpha_L_fucos, Alpha-L-fucosidase.	4.11571e-84
NZ_CP054692.1\|WP_039943845.1\|2374239_2376081_-\|flavocytochrome-c	gnl\|CDD\|273816	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport].	1.78533e-145
NZ_CP054692.1\|WP_044634937.1\|2366880_2368611_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	3.22429e-130
NZ_CP054692.1\|WP_174897181.1\|2372491_2373703_+\|aminoacetone-oxidase-family-FAD-binding-enzyme	gnl\|CDD\|367519	pfam03486, HI0933_like, HI0933-like protein.	2.49863e-141
NZ_CP054692.1\|WP_002697897.1\|2352639_2353164_-\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|223877	COG0806, RimM, RimM protein, required for 16S rRNA processing [Translation, ribosomal structure and biogenesis].	1.94221e-34
NZ_CP054692.1\|WP_002697901.1\|2351561_2351918_-\|50S-ribosomal-protein-L19	gnl\|CDD\|376502	pfam01245, Ribosomal_L19, Ribosomal protein L19.	3.25153e-58
NZ_CP054692.1\|WP_024753296.1\|2376619_2376994_+\|30S-ribosomal-protein-S12	gnl\|CDD\|235355	PRK05163, rpsL, 30S ribosomal protein S12; Validated.	1.65085e-87
NZ_CP054692.1\|WP_002697896.1\|2353182_2353416_-\|KH-domain-containing-protein	gnl\|CDD\|224750	COG1837, COG1837, Predicted RNA-binding protein (contains KH domain) [General function prediction only].	4.10131e-24
NZ_CP054692.1\|WP_024751815.1\|2353434_2353683_-\|30S-ribosomal-protein-S16	gnl\|CDD\|234588	PRK00040, rpsP, 30S ribosomal protein S16; Reviewed.	1.77002e-36
NZ_CP054692.1\|WP_174897178.1\|2356857_2360133_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.89695e-09
NZ_CP054692.1\|WP_002698755.1\|2377005_2377476_+\|30S-ribosomal-protein-S7	gnl\|CDD\|235398	PRK05302, PRK05302, 30S ribosomal protein S7; Validated.	3.7586e-100
NZ_CP054692.1\|WP_024751819.1\|2362197_2363703_-\|IMP-dehydrogenase	gnl\|CDD\|180842	PRK07107, PRK07107, IMP dehydrogenase.	0
NZ_CP054692.1\|WP_174897179.1\|2365165_2366881_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	7.67531e-134

>NZ_CP054692.1|WP_024751818.1|2360587_2361769_+|IS630-family-transposase
MPKPPSKLELNPEELTYLESLVRLRTIQAQTLTRARILLLKSKGLSIKETADKVGYTYRSVALCLKKYKQGGVEHALTDAPGRGNNPEITDEEKSWIINLACQKPTTFGYAAETWTYALLTKHINTTAESAGYLRLATIHKTTVFKILTEADIKPYKIEYYCENRDPDFDRKMHNVLLVYKQLELYFEENKPLQTEEGKNIHVVSYDEKPGIQAIATTSDDLPADETHQCIRRDYEYKRLGTLSLLAGIDLQTGDAIPLVSDSHTSKDYVQFLKILDERYPQEDKIRIILDNLKVHTSKETIRYLSTVPGRFEFVFTPKHGSWLNMIEGFFSKLTRQLLRGMRVKSKTELVNRLYKYFDEINEEPVVFHWKYNLDDLDVSEAVITDALKYELN
>NZ_CP054692.1|WP_174897178.1|2356857_2360133_+|tetratricopeptide-repeat-protein
MPSLQELKEFRDELKHIGNEPEVTADWGDLYDELPPPSEAPVPDVNVDDLLDSIGIDTDALLAAEQSAQSRNEDKKPEKEKRNLEAELVDIDLDDIGKDPAPVNPPSETGDALPEMDLTSDFFDSSDSDWKTHEIPETDVSLDVLDAPEEKTEIKELPEEPLSIPQSNFSDAADFDDLLSSLDLDEPMQDQNTEKEESFSDVPESLLAGLQDDLNTAKTESEDASLPEFDLGDFDFNSPEIDDLDIDKIGEAEALDLQEIEDAPLESADHNAFDIPASAFDEIPSSTDEKDSDTFPEDFLDLSLPAESDDGFSDNAFNLEDSLTLQPESGLKDDFTPDISALNAPPEENVDIESFTAPPEIDVENFTAQDQNQTDEHTGFAVEDNALDTSIEDINEGAFELPESFQSFAQESKLHDFRPLSHDDEEIDENAALSNDDYLYFLHRLESFPLNVRLIIQEYLANVPDSDAAKMNLIRMIVDDTSLKKVAAHLETILEKSVNIPKGFERKTAEEYEREKRTFSYRLKHRILPIATMSFLALLFAFCISVLSWQFIYKPIHSEILYKTGYTALESANYQAAISKFDEAGTYWKKRRWYFSFARGFRDKKQYLNAEKIYLRLLYDFKQDKEGGIEYAEMLSKDLRNYEKAETVLRRQVLDYHINDSDALIALGNLFLDWGDEDSSKYQEAEKIYQSLISMYGTKDPYLSGLMRYYIRTDNLAKVLPIQEILTDKNSMLVSDLIELGGYLLEKRYEPKPSDSEKLRAKIEDLRKLLDKALQAAPAEPEAYYNLGRFYIYNYKPAKAKDFLSEAIRLYQKSAHLTAGKTIKKINAMRLLGELLCDDKEYLDAHDLYAQALTEYQEYTAIRALPPHRIIGLLYSNYADIDYFISGNFDSALENYRSAVKELNNTPSIQYRIGFLEYKRDNYTAAIQAMSLAYAEKPDDKNLLYGFGTVLFKRGNYFAAQGYYNHLMELLDIERLRKGIMFPYTNKEDAAFIDEYMRTSNNFGVVLNRLAETNGDSQKNARAMALFAESSRAWDALTRNPDTMIRSKSASLAYLNIQNMVNSLSAYEPEVYADIPMTLQYEKVLQQKEDR
>NZ_CP054692.1|WP_002695094.1|2355925_2356636_-|hypothetical-protein
MKSIKLVFFLSAIFCAAAGFCSEQIEPLVYNSLVDSIHKAKEPSIQGKYIIFTANGSSRYAGIAFAHENYKKIYSFKKLNLETTGKTSNDPVLFFIMPIPEGMRQIRYRMVIDGLWTADPYNANQIYDYAEKMSVSILDVPFQKEYKTNVENGLTQFVYQGEAGQRISLAGTFNAWDPFMYVLKEISPGYYELYLPLPPGTWLYAFFKDGNQLPDIANSDHVYTVDGRTASVLQVK
>NZ_CP054692.1|WP_024751816.1|2354294_2355704_+|alpha-L-fucosidase
MLFYKTGEDFWRKIMEEPIMEKGVHAYSEEDRYVVPKSAAVRKHLEFFTGLKFGLMMHWAPGCQIATYESWPLCDDADDWSREDVIWTDDMEEFKHHYWNANKTFNPIKFRPDHWADFAKRAGFKYLLFTTKHHDGFCMFDTQQTDYKITASDCPFSSNKRANIVQEVFNAFRAEGLAISAYFSKPDWHSEYFWAPEMGKAETRNANYDIPSHPELWNKFVDFTHQQLREICSLYGHIDVLWLDGGQISPRIHNQDIRLGEIVEEIRNTTQPHLIVCDRTVGGEYENIITPEQSIPSHYIGCPWEACITAGDYFSFHYEDNFKSPHAIVRLLIEVVSKGGNLALNIPPQPDGQLPAKAMRNLLRVGEWLHIHGQAIYNTRGYPIAQEQKIFITEGSENVFVFYCYDENTPRLPRRVNIKLKDERAVQKITCLRSGAAVSFIQNGKILVIHTIELDPLGANYADCLKLCF
>NZ_CP054692.1|WP_024751815.1|2353434_2353683_-|30S-ribosomal-protein-S16
MSVKIRLKKFGSKKRPFYRIVVQDSREPRDGKTIEELGIYHPIAAEDKQIAFDSEKVRSWLDKGAEPTDTVRRLLNKKQFTL
>NZ_CP054692.1|WP_002697896.1|2353182_2353416_-|KH-domain-containing-protein
MDKDLVEYIAKSLVDDPSAVQVTRTEEENLVVLQLRVAENDVGKVIGKNGRIVKALRTLLSASAGNARTRYSLEILD
>NZ_CP054692.1|WP_002697897.1|2352639_2353164_-|16S-rRNA-processing-protein-RimM
MDLLVTAKIFGTFGVEGFVKISSFSGEYEHLLNLAEIRLRLPKSKTGKETQELLYTIEEIELRYTDALLKLEGIDSVEAAKKLVGSELLVPRDMACPLYEGEFYITDLCNSILVYQETPVGTITSVAEGGGGYVLEISEAETGLVKYVPFIKQFIGKVDIAQKRVELMHRWILE
>NZ_CP054692.1|WP_024751814.1|2351914_2352643_-|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MRFDVLTLFPQIPQAFFDSSIMAKAVQKGIISYTLVNIRDFAHDKHKTCDDIPYGGGAGMLMLAEPLALALDSVQAKEKRVLYLSPSGKKFSQKTAEQLSKEESLVLICGRYEGIDQRIIDEYVDDEVCIGDYVMSSGELAALVVIDTIYRLIDGVISGESLEEESFTDGLLEYPQYTRPRVFRNREVPAVLLSGHHANIRRWRLEKRIEKTLKNRPDLLQVLQESGTMSQEAQIILKELIK
>NZ_CP054692.1|WP_002697901.1|2351561_2351918_-|50S-ribosomal-protein-L19
MSVDLIRQIEEKQKKEVSNFKVGDTVKVHFKIIEGKTERIQVYEGLVLCFKNAGLGRTFTVRKNSYGVGVERVFPLYSPRVEKVEVVRPGKVRRAKLYYIRDKVGKSAKIKTLVTKKH
>NZ_CP054692.1|WP_148879039.1|2350634_2351555_-|hypothetical-protein
MNRTAETALLTLPRISFQNAILKDGETVSVRLLSPPENGKALVLIKGQQIEASVLQNLKKGDILRVTVAIKESTVFLSPQKETFTEQTQPLFQQLGLPVTEANVALLSTLQTIQSKDMPQILSQLAARIKKLPQNQKEAAFLLGILKDRKIDLHDEVFSLILGLLTGNADDHSKNKANQDDSDIFKLINHKKGSHLHWIVIPFQKELAAKTWKGSLALLLNLPKNTCEELVLRAKTDTACWIFVLKGTDCYIENAAETKLSKTKKTAYCRLLQHELQALGLKNIRVEYGISSKSAYFPLAGIDISV
>NZ_CP054692.1|WP_024751819.1|2362197_2363703_-|IMP-dehydrogenase
MAFYYTEPSHTFNEYLLIPRYSSKEHSPQNVSLRTPLVRMKNGEEPQFTLNIPLVSAIMQSVSNDKTAIALAKEGGLSFIFGSQAIEKQAEMVSAVKNYKAGFVESDSNILPRQTLQDILDLKIKTGHTTVAVTEDGSAHGKLLGVVTGRDYRPSRMDRSLLVSEFMTPISKLTVGKEGISLAEANDLIWEYKLNSLPIVNEKGELVAFVFRKDYESKKENPNELLDEKKRYIVGAGINTRDYKERVPALIEAGADILCIDSSDGFSEWQKETIQFVKKQYNGRVPVGAGNIVDKDGFDFLADAGADFIKVGIGGGSICITRETKGIGRGQATALIEVAKARNEYYERTGVYIPICSDGGIVYDHHITLALAMGADFCMLGRYFARFDESPTNKVLVNGTYMKEYWGEGSSRARNWQRYDSGGDAKLAFEEGVDSYVPYAGPLHDNVQESMHKVKATMCNCGTLTIPELQKHAKLTLVSSASITEGGAHDVILKDIHANRT
>NZ_CP054692.1|WP_148879847.1|2364524_2365127_+|TetR-family-transcriptional-regulator
MCAKKRLPAEVRKKEIRDAAKKVFLQKGFSNTSMEDVIAEVGMSKGGVYRHYKSTAEMLHDLMTDGNHNRYNLIDDFLAKEKNISEPDVAIEVSLMKLLDKNDYKSLYAMFLMESEKNPDLKKLKNKFFNEGKKEFLRVVTQRDLKELECFISDEWVAFTNAIIVATEILDVRKVFCNHKDFFKDIIRQYMEKSQNKNNF
>NZ_CP054692.1|WP_174897179.1|2365165_2366881_+|ABC-transporter-ATP-binding-protein
MNLIKRYVQKNKGKYIASIFFAVVGVIMDLAAYIILSKIIAALITGSTDAGFYGKNILYILLVLVLKEIFAGTSTTISHTATFKSLKEIRKEIARKLFKMPLGDILNQSSGKLKNIIVDQVDHMEITLAHVIPEATANIVGPAILLIYMFILDWRLALLSLIPLIIGMLAIMSVMNESYKKNYKESVELGQNMNNAIVEYIGGVEVIKTFNQSETSYKKYSDAVYDNARFYYNWMKGCMMQVSIGRFISPMGLLTILPFGVFFYIRGTIALTALIQLIILSFGTVSGILKVMNFMDDLARVGTITGEIESILNARELSHSEESVSINNHTIEFTDVNFSYEKDKKVIDNLNLKINEGDVTAFVGPSGGGKSTIAKLIAGFWDTDAGEITIGGANLKEIPLSQLSDLISYVSQDNFLFDMSVLENIRIGNPNASDSEVKEIAKKSGCEKFILELENGYDTLVGEGGGHLSGGERQRISIARAMLKNAPIVILDEATSYIDPENESIMQEAIGNLVQNKTLIIIAHRLRTITDADKIFVIQGGHIESSGTHQELLEKSSLYSDMWNAAIKGDE
>NZ_CP054692.1|WP_044634937.1|2366880_2368611_+|ABC-transporter-ATP-binding-protein
MLTIFKKIWNFSKQEQSNIKFSLFFGFLNAVFNALQFAAIYYMLIKILQNEIAVIDIGIVSAIMLTSAVGKVLTQNKSQLQQTHAGYFMAAHKRISIGEKLKKVPMGFFSDFSLGKITTLATTSLSQIEIWVPLLLVLVLGGILNTVVFVLSLFFLNVTITAAAVVGIIGFFIVTSLMERKSRRNAHHVQEVQTALTKEVLSTVQGMQVIKSYNLDGENNKELDDSFERTHVLLLKLEKLMIPFTVIQRIVIGLTITCMLYLAVTMYISGTLTLAKTIMSMIASFIIFEGLLAAGSSMAVLRIAENAIDSLDYVNTIPDMEEGKDEKEISNSNIEFKNVSFSYDKKKILDDVSCVIKENTMTALVGPSGSGKTTFSQLIARFWDVNAGKITIGGKDIREYTLPNLMSNISYVFQNVYLFNDTIENNIKFGSPDASREEVIAAAKKACCHDFITALPNQYETIVGEGGAALSGGEKQRISIARAMLKNAPIIIFDEATANVDPENEDKLQTAIEALTKNKTVIMIAHRLKTVRNANQIIVLNDGKIEELGTHNQLMQKEGTYKKFIEARQSASSWKI
>NZ_CP054692.1|WP_174897180.1|2368786_2368933_+|hypothetical-protein
MLYNSVAVILIEASTQNYKIEALKLAATVSKNTKTTIRTGTDGGGSTL
>NZ_CP054692.1|WP_174897181.1|2372491_2373703_+|aminoacetone-oxidase-family-FAD-binding-enzyme
MSKNKMKTIIVIGGGPAGMMAAYQASFNHNVILLESNAHCGRKLLLTGNGRCNVTNRREIENFLQHCSRSCRFLYSAFSQFDNYDLIKFFEDNNCPLIEEEDERMYPKTQKAQTVLDIFISLLKNRNVVIKYQTKAIDLIVDEKKIIGVKTDEQIINCDGLILATGGKSYPQTGSTGAGYQMLKKLEHSITDLYACEVPLVCQDAIIQTKELQGLSLQNVETSLIIDNKIRKSSRLNLLITHFGFSGPAALILSEAVSQHEVSKVTKTDCNLAVTHYKLDLDKSQSIAACLKQIQPKRWRDYLAAQIDFSLNLKLHQLSKEQKAVFNSLIFDHRFKLQGTLPIEKAFVTGGGLNTGELNPKTMKSKLIENLAVCGELLDCHGELGGYNLTIAMVTGYVAGKNF
>NZ_CP054692.1|WP_039943845.1|2374239_2376081_-|flavocytochrome-c
MEVYVKRLFISLAAVMVLLFASCGNKDTYTGTAKGNNADITVQVGYKDGVIQSVKVTKHAETAGVADAALEKIPEAIVAHQSLNVDIISGATETSKAIVNAVKSALQSANADLSKFDTAVVKEQREAQELTTDVVVIGAGGAGLTAAITAASEGKKVIVLEKKSIAGGNSTLATGGMNAAKTSYQDKNTFAEDKGVTTKIAAAEKDYPALKDLTATVKSQYEKYKKDPKGYFDSVELFELDTMVGGKATNNPELVKTLTKNSKESLEWLATIGADLKSVGSFGGASVKRIHKPVNAEGKTVAVGSYLVPILEAQAKKAGVQIIFDTPAYAIKLTDSGVTVEAEATTVHAKSVVIATGGFAGNSEMVEKYKPELKGFATTNTSGITGDGIKIADALNAALVDMEQIQIHPTVEYTSKALITEGLRGDGAILVNQDGKRFFDETSTRDKVSAAEIAQKGNYAYLIIDQRMADASAVIQGYIKKGFTKTGKTIEELAKEIEITPETLAATLQTWNKAVEAKTDSEFNRTSFAEKLDTAPFYAIKVSPGVHHTMGGIKINSNAQVIDKSGAVIPHVYAAGEVTGGVHGANRLGGNAVADIIVFGRIAGKQAAANAGN
>NZ_CP054692.1|WP_024753296.1|2376619_2376994_+|30S-ribosomal-protein-S12
MPTINQLIKKGRKAAVSRTKSPALQACPQKRGVCTRVMTFTPKKPNSALRKVARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTKDALGVADRKRGRSKYGAKKPKA
>NZ_CP054692.1|WP_002698755.1|2377005_2377476_+|30S-ribosomal-protein-S7
MGRKKKSINRPVAPDTRYNSVVLSKFISRMMLDGKKSTTTHILYACFDNIKEKTGEEPLEVFTKALENVKPLVEVKSRRVGGATYQVPIEIRESRREALGMRWLIAAARKRSGHGMPERLAAEIIDAYNNTGTAFKKKEDTHRMAEANKAFAHYRW
>NZ_CP054692.1|WP_044634368.1|2377552_2378272_-|hypothetical-protein
MRRLFFSFMVSVTILLVFSGCAPRAEIKVFPNGNASMKIKIIPGKTTEEVLVRFAQMSDTQENKDSIFDIPDIKENLVKQGFTVRALEKKSFAGLEADIGARWNQSLIKSVLNTKKGTIDFHLAPEDLKEIHALLPDESKEYADLLMAPVFTGEELSVDEYKAVVFSAYGEKIAKELTQSSFDFTIRCPGKVQTASIEPVGKVTYQKNADTVKAVVPLVDILTLKEKVNVHIEYKPSSN

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Crispr_ID: NZ_CP054692_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_15

2458955-2459072

Orphan

Consensus_repeat	Method
AGCATCGACCTTTCTGCATGCACAAAGCTTACCTCGATTGAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_15

>merge|NZ_CP054692|15|2458955-2459072|CRISPRCasFinder
AGCATCGACCTTTCTGCATGCACAAAGCTTACCTCGATTGAGTGGGGTGCTTTCTATGATTGTAGCGGGCTTACAAGCATCGACCTTTCTGCATGCACAAAGCTTACCTCGATTGAGT

>NZ_CP054692|15|15|2458955-2459072|CRISPRCasFinder
AGCATCGACCTTTCTGCATGCACAAAGCTTACCTCGATTGAGT	GGGGTGCTTTCTATGATTGTAGCGGGCTTACA
AGCATCGACCTTTCTGCATGCACAAAGCTTACCTCGATTGAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_174897189.1\|2453768_2455799_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_002698599.1\|2465793_2466285_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753231.1\|2467030_2468083_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224453
NZ_CP054692.1\|WP_174897193.1\|2468070_2471061_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223957
NZ_CP054692.1\|WP_174897191.1\|2457612_2457933_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_044634388.1\|2452379_2452832_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753258.1\|2447519_2449562_-\|polyphosphate-kinase-1	unknown	unknown	gnl\|CDD\|235469
NZ_CP054692.1\|WP_047170261.1\|2471583_2472417_+\|HAD-IIA-family-hydrolase	unknown	unknown	gnl\|CDD\|319858
NZ_CP054692.1\|WP_024753235.1\|2462853_2463696_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897188.1\|2446230_2446677_+\|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|341466
NZ_CP054692.1\|WP_024753234.1\|2463931_2464588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002698635.1\|2443236_2443794_-\|flavin-reductase-family-protein	unknown	unknown	gnl\|CDD\|224766
NZ_CP054692.1\|WP_148879146.1\|2450079_2451327_-\|sodium/glutamate-symporter	unknown	unknown	gnl\|CDD\|223857
NZ_CP054692.1\|WP_052335779.1\|2460939_2462745_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897190.1\|2456461_2457115_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371078
NZ_CP054692.1\|WP_024753236.1\|2460229_2460580_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP054692.1\|WP_024753260.1\|2444964_2445681_+\|RibD-family-protein	unknown	unknown	gnl\|CDD\|224896
NZ_CP054692.1\|WP_039943839.1\|2444578_2444968_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP054692.1\|WP_002698596.1\|2466326_2467034_+\|response-regulator	unknown	unknown	gnl\|CDD\|381089
NZ_CP054692.1\|WP_024753228.1\|2472488_2473808_-\|TRAP-transporter-large-permease	unknown	unknown	gnl\|CDD\|224509

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_174897189.1\|2453768_2455799_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	1.99841e-50
NZ_CP054692.1\|WP_024753231.1\|2467030_2468083_+\|hypothetical-protein	gnl\|CDD\|224453	COG1536, FliG, Flagellar motor switch protein [Cell motility and secretion].	2.70845e-61
NZ_CP054692.1\|WP_174897193.1\|2468070_2471061_+\|insulinase-family-protein	gnl\|CDD\|223957	COG1026, COG1026, Predicted Zn-dependent peptidases, insulinase-like [General function prediction only].	0
NZ_CP054692.1\|WP_024753258.1\|2447519_2449562_-\|polyphosphate-kinase-1	gnl\|CDD\|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NZ_CP054692.1\|WP_047170261.1\|2471583_2472417_+\|HAD-IIA-family-hydrolase	gnl\|CDD\|319858	cd16422, HAD_Pase_UmpH-like, uncharacterized subfamily of the UmpH/NagD phosphatase family, belongs to the haloacid dehalogenase-like superfamily. This uncharacterized subfamily belongs to the UmpH/NagD phosphatase family and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	5.60176e-102
NZ_CP054692.1\|WP_174897188.1\|2446230_2446677_+\|iron-containing-alcohol-dehydrogenase	gnl\|CDD\|341466	cd08187, BDH, Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. The butanol dehydrogenase (BDH) is involved in the final step of the butanol formation pathway in anaerobic micro-organism. Butanol dehydrogenase catalyzes the conversion of butyraldehyde to butanol with the cofactor NAD(P)H being oxidized in the process. Activity in the reverse direction is 50-fold lower than that in the forward direction. The NADH-BDH has higher activity with longer chained aldehydes and is inhibited by metabolites containing an adenine moiety. This protein family belongs to the so-called iron-containing alcohol dehydrogenase superfamily. Since members of this superfamily use different divalent ions, preferentially iron or zinc, it has been suggested to be renamed to family III metal-dependent polyol dehydrogenases. This family also includes E. coli YqhD enzyme, an NADP-dependent dehydrogenase whose activity measurements with several alcohols demonstrate preference for alcohols longer than C3. The active site of YqhD contains a Zn metal, and a modified NADPH cofactor bearing OH groups on the saturated C5 and C6 atoms, possibly due to oxygen stress on the enzyme, which would functionally work under anaerobic conditions.	1.4964e-66
NZ_CP054692.1\|WP_002698635.1\|2443236_2443794_-\|flavin-reductase-family-protein	gnl\|CDD\|224766	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only].	6.18434e-23
NZ_CP054692.1\|WP_148879146.1\|2450079_2451327_-\|sodium/glutamate-symporter	gnl\|CDD\|223857	COG0786, GltS, Na+/glutamate symporter [Amino acid transport and metabolism].	1.74145e-140
NZ_CP054692.1\|WP_174897190.1\|2456461_2457115_+\|hypothetical-protein	gnl\|CDD\|371078	pfam10476, DUF2448, Protein of unknown function C-terminus (DUF2448). The family DUF2349 is the N-terminal part of this family. This protein is found in eukaryotes but its function is not known.	0.00895147
NZ_CP054692.1\|WP_024753236.1\|2460229_2460580_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.50848e-10
NZ_CP054692.1\|WP_024753260.1\|2444964_2445681_+\|RibD-family-protein	gnl\|CDD\|224896	COG1985, RibD, Pyrimidine reductase, riboflavin biosynthesis [Coenzyme metabolism].	2.63849e-22
NZ_CP054692.1\|WP_039943839.1\|2444578_2444968_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.04161e-35
NZ_CP054692.1\|WP_002698596.1\|2466326_2467034_+\|response-regulator	gnl\|CDD\|381089	cd17534, REC_DC-like, phosphoacceptor receiver (REC) domain of modulated diguanylate cyclase and similar domains. This groups includes a modulated diguanylate cyclase containing a PAS sensor domain from Desulfovibrio desulfuricans G20. Members of this group contain N-terminal REC domains and various output domains including the GGDEF, histidine kinase, and helix-turn-helix (HTH) DNA binding domains. Also included in this family is Mycobacterium tuberculosis PdtaR, a transcriptional antiterminator that contains a REC domain and an ANTAR RNA-binding output domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.71446e-36
NZ_CP054692.1\|WP_024753228.1\|2472488_2473808_-\|TRAP-transporter-large-permease	gnl\|CDD\|224509	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism].	2.50426e-127

>NZ_CP054692.1|WP_174897191.1|2457612_2457933_+|hypothetical-protein
MKKAFLKTSRIMLVLGLALLATLFGCRQTTEVQNQQKPIPEPEKFAVSFSVDVPEGVEKADFKLTAKVEGAHQNKLETAKLLKHMGFLLRRNRSFIKQKNEKLMNG
>NZ_CP054692.1|WP_174897190.1|2456461_2457115_+|hypothetical-protein
MKKLRFLGFAIVAIALIVSCPGTSGTPKASENTGGKVQPAPQPAPQPAPAPGESGNTSPDGNTPLGGTNDLSTEDVKKVVDKINQMFEGLGVEVTDSSPDAPITKETTPNQLKERFKFTKNPALADSCLTKFIKAALEALKTGDIPAVPDGAKAFEKLGLDLKLVDSKPGQPIKKDTTSEQLKARFTVEGDATAFDYFVAYVRMYLKGQDSEPTPSL
>NZ_CP054692.1|WP_174897189.1|2453768_2455799_+|HAMP-domain-containing-protein
MFLATIVDRTTKRMITDDLKRSLTDATANAAKLFDSHMREWWEYASGLALSDTLQDPDISYLKKAQRLEGFTKAQGENIKHLIVDAQGRLYLANGDVVDVSKQDWFIESKGGRNKYFSTPFISKANKELISVICVPVFDINGNFFGAFQLEIDGRFLSMDSLPDFNLEGKTSQIFILDKNGTHIANKDLTFVTKRVNRIEEAKSDPSLKSLATAMSKAISEESGLINFKYNGIDRVGGFAKMKQTGWTVVITQDVKELEAPLYSLRIKLLFINIAVLIAAFCVIFFIVQSITKPLNRTVDALKNIAEGEGDLTVRLPVQGNDELTQMAAYFNKTMEKIRAMTKKVGVNAVAMHELGTNLSSNMTETASAVNQISSNIEGVKQQVINQSASVTETSATMEEIIRTIEQLNASIESQATSVTQSSASIEEMVANIASITESLNENNQAMGDLAEQIMAGRNGAVDANNFVKQMSERSDALGEAANVIQNIASQTNLLAMNATIEAAHAGDSGKGFAVVADEIRKLAEESNNQGKQIGAMIKETIAIIVEMTKAGKATEEIFNRVYQVSSKIAEREEVVAAAMQEQDRGNKEVLQTIKTISEVTSEVKGGSTEMLSGGRTIAKEMQKLDELTRMITDSMNEMASGVVQINNAVQEVQEMAHQNKNAIDSLNNEVGKFKV
>NZ_CP054692.1|WP_044634388.1|2452379_2452832_+|hypothetical-protein
MKKNLALLFGALICFSIFSCAGGIVNVPFVISVYIEKEDGTRFTENEVSLLKLNSNGRIYTDKCDENGMPIYKDGGFRIQYELGYARSMRKIKEIENSWKKKMNEFWFMIDGTSIGYEVFTMKPLGENYVISSEPKESKITYIIKLKKKL
>NZ_CP054692.1|WP_148879146.1|2450079_2451327_-|sodium/glutamate-symporter
MSFEMVGSVFTIKLDAIFTLALASILLLLGYWIKNKVKVIEKYCIPAPVVGGFLFMFITYAGHVSGTFSFNFVNTFQSPFMLAFFTTVGLGASFKLLKQGGKLLIIYWLIAGVISIFQNTIGIIFVKTMNIPAPYALLSSAISMIGGHGAALSYGNTFAEMGYEQCPLVGAAAATFGLITAVLVGGPLGRMLIEKNHLKPSEDENFDALSAQAINTQSVELTSLDIIKNVVVIIVCMAAGSLIAKFISSLIVIQKLEFPTYVGAMFAAVIVRNVNDKFKFYKFSYPLVDEIGNVMLSLYLALAMMTLKLWELAGLLGGVLLIGLAQVAFMILAAYFVVFKLLGSSYDAAVMCAGLCGHGLGATPSAIVNMTAVNERYGMSKKAMMIVPIVGAFLVDIIYQPQTIAFIGYFVQAIK
>NZ_CP054692.1|WP_024753258.1|2447519_2449562_-|polyphosphate-kinase-1
MYLDRELSWIDFNARVLDEAAQQTVPLLERLRFIGIVSSNFDEFFMVRVAGLKEMIFETAKTDNQSELSYIQELEKIEKKVRFLFDKQEHILHSEILPQLALNGLCYKKPQDCTEVQQEFFTEYFQTTILPSLIIRKADLNTILRAVTNIQLHIAFLVEKKQQGLESNKKTSEIMLVQKPSHLSRFIFLPTKDVTEFVLLDELIQFLGESIFPQYNILAHMIFKVNRAASMTVDETRDEDFIQAMEDVLRRRKNSFLVRMNCTNNSPELLESLQKEFNLLPKEIYASAGPVGLAEFASLADICDFPKLKNSPWAHSISSSLDLQKSLWKQIRKKDILLHVPYHSFDPVLKLISNAATDKQVRSIQMTLYRTSRHSPGIKMLQRAAKKGKRVRVFIELKARFDEEQNIEWVRKLTRSGVTVMYDLPHYKVHAKMLLITRQDKDGERDYLHLSTGNYNSSTAKLYSDISLFTVNKQMTEDAKQIFELLARSPQEKTFKNSTLIIAPLFMKQKLLDLIERERQNALAGKPAYITAKMNSLSHTELIDALYKASIAGVCIRLNVRGICMLVPQVAGLSENIQVVSIIDRYLEHSRIFQFCNNRNTETYLASADWMPRNLERRVELMFPVFDEDNKKEISDILETYFQDNCKAHYMQSDGSWKRAEPQGVVFRAQEELQKKYQQG
>NZ_CP054692.1|WP_174897188.1|2446230_2446677_+|iron-containing-alcohol-dehydrogenase
MLGNFKYANPTRIYFGEDSLENLHGELKNYGKNILLVYGGGSIKKNGIYDDIISILKKENKNVIEDAGVMPNPTLKKLYEGIKIAKENKIDFILAVGGGSVCDYAKAVSVSVHCTEDPWEKFFVKAEEPIQKLFRSAVFLQWWEPARK
>NZ_CP054692.1|WP_024753260.1|2444964_2445681_+|RibD-family-protein
MKKTYIIIHTHTSIDGNINSMDLPEFDIASQHYQQLCLSKDSKIKIDAYLNGKTSTEDNVTFYKKPKLDENAPKVPGGDYVAVEKMPMYYISIDPKGELAFETNTFYYGGVPTHFIEVLTEKASNAYKAFLRSKEISYIVAGQNNIDFEIMFEKLQELFGIRRLMVGGGGTINWTFLDRGFVDEVSMIIAPIANGDPNASRFFTAKEPYTKIKDKAFELKNVEVLDGGVIWALYKTKK
>NZ_CP054692.1|WP_039943839.1|2444578_2444968_+|MerR-family-transcriptional-regulator
MTANTLRYYEKEGVIPEVARTRGGIRNYTEEDLNWIQTAICFKSAGLSVEMLAQYVRLFQKGDTTLKQRCDLLKKARVEVLEKKKKYDDALEKLEYKIAKYEEAVKTGKLVLDSENTELCKVKTRRKSK
>NZ_CP054692.1|WP_002698635.1|2443236_2443794_-|flavin-reductase-family-protein
MRKDFGVKTWFYPLPVLIVGTYDENGKANAMNAAWGGIYDTNQVIICLSPGHKTAKNIHAKKAFTISFADADHVVAADYVGIASGNKVPDKMEKAGFTTEKSVFVDAPIIRELPMALECRLIKTTEEGNFIGEIVNISADEKIIGEDDLIDAEKLQAICYDPVHHDYLVLGKKVGKAFSDGKSLE
>NZ_CP054692.1|WP_024753236.1|2460229_2460580_-|ABC-transporter-ATP-binding-protein
MALPNFFAVAIVTPIMMFAVMFFVDWRLGILLVILTIISIACMFGMYGDMTFMEKYAKALEKMNSEAVEYVRGMQVIKIFNASVASYKSFYNAISDYKDCVFKYTMSCRVPYNLFF
>NZ_CP054692.1|WP_052335779.1|2460939_2462745_+|hypothetical-protein
MQLPIECKNATHLELHITKATPNKRIWVVSFFAGFEYALDESQIVKIKYQQKKSENKEGSIGRLYFNTIDLTLSNIDRIFDKENPKSKIVNYLTTTATFSVVLSMQQDKMQNRFVLDLGVFSVTDFSSKLSEAKATIKGTDFIGSQKDKEISLGIIENKSAYEVFKTVALKLGLEPLGIDPTLKNITYSLLPLNGTVAKVLNQLCSNTNVFCTTRGNIFVATLLKNKHATLRYPQRYFALNEFKETNATKTQSLIPNVINLSYSTYEYENGIFIKDKKVLFYNKDIIQQPKNWETMPLTEYINDVFIPEKNKPVSYQKTFYAGELPKNFHHIEISDDFLYRSFEYKVETKKNDKGALESVTVKLWNYEKRDDTDQCTIFICVKEKPASTIIDSQDFPVYSHADEYIRGAELEFQPENQNDAAEIERRNIPNKPEIFSVETTGDIQVDRIEVGNYFVRGFFEFYMTRTEKGVTVKAWNYSAVPQTLTVNVYGVRLKKSEQKITIQARNEENIKINGEIVKNISVDGVSDKKSAEEILKTAMKYYKELNGALSDETWSDPRIQLYDFLGFKKLRYPNYSQGIVDEIGLEYAGYLTQKITLRET
>NZ_CP054692.1|WP_024753235.1|2462853_2463696_+|hypothetical-protein
MSYTRLMNKDETGRAPENKVTGEVVNVIQGVPQKLAHSIFFEEDFFIYADAEKRQKLRRGIDFDFENEDTIATEITNKNCWTRITVYKSISQVYIDYKVCGDFVTAEIINEIYDAADAISNDVNALNDKLEANKKELANHKVDTEPHGASKYVNPNSLALRTSAGTLQAANATEGNDLVNLNVLNEKQREQDNATQNKITESARTIYHVLQANEAVLTKDDFSEGLDPNASDYEEQLATRLETHVNDLKPHHNAIRNKDGNLTTGEATLETEAVNKKTAG
>NZ_CP054692.1|WP_024753234.1|2463931_2464588_+|hypothetical-protein
MEQAGGFQNSISPDATPQSIALRTDTGTLKAANATENDDLVNLHTLKKEIDSKVSVIPSAENLFILFFQNTPYVQFPGKPEPGTLFSFDGYHWEKANYGGAFFRAEGGNANGFNGGVQAGGIPDAQGWLGFHGNRGGFAGVKGREGNAGNSGVFQERKRVEDPDNGIVTPVNETLINNYKELYLIEATEFRLSYGGMPIANEVRPVNYTVRLWYLIKD
>NZ_CP054692.1|WP_002698599.1|2465793_2466285_+|hypothetical-protein
MLVEDHIISELIMSISKHYADTVATRFLRPLFAAILSDIDIARHISDLTEHADDFIIQGFHLDELYEDIIALSRFIFLVRRDILPHLRTLAEENIRMDSIDRVYRNMAFHALPTNITILAELLYSLYERAIAYDKKQSRKKGKKPIAHRFSELENVKKLIEKY
>NZ_CP054692.1|WP_002698596.1|2466326_2467034_+|response-regulator
MTKTITNQIHILIAESDTIIALDLQSMLQRLGYTVAASVETAEDAISFAKQLNPDLILLDIGIQGKINGIEAAIKIQDSVKTPMIFLLSAADTPLLTKADDINYDGYLLKPIHPDSLAGTIDTAMYKYRSMQRIAQAQEEIKRYRKNYASLETLAKVDRVLFWQKEENCEVQFSSNEAGSRYRAIIEAAIQQYETDFAVFHRFDTIETVLITGTKTATEASGVIIRIDEDKEVHQ
>NZ_CP054692.1|WP_024753231.1|2467030_2468083_+|hypothetical-protein
MTDIESEMLKRGLIKVPSADQKTESSYRKVAKFLYLIGVEQAAQVLKQLKPEQIDKVVTELVTIRHIDKDEATYILSEFSALYESSKNSLGGIQTAESMLTKAFGAEKASEILKAAVPEKQTKPFEFLDSADVEKIAQLLDKELPATKTLVISQLRPKLAAEYIKTLPAEEKKDIILRLAKLKTILPEVFRQVSNSMQEKYQRLQTGKTDLIDGRAVLAEILRKIDPATEHDILQNLSDSNPELEQNIRERLFTLEDILGINNSYLQKKLSTLTDDTVAKLITGKHEAFIEKILSNVSKNRAYYIQDEKKTNPSTLKEVNEVTNQFLTELRRAWERGEFIIEGRDEEWVP
>NZ_CP054692.1|WP_174897193.1|2468070_2471061_+|insulinase-family-protein
MGALIHGFEIIWKHDLPEMQAVGVYAKHKKTGLELYHILNDDEENLFAYSFMTASANSTGVAHILEHSVLCGSKNYPLKDPFVLLSRQSVKTFLNALTFPDKTVYPASSVVEADYFNLLQVYGDAVFFPLIEEWTFKQEGWRFEFDANNKLCLQGVVLNEMRGNYADFDSLMYDYARASVTQNSIYMYDSGGEPSTIPSLSYEQFRGFHKKYYHPCNCKLFLYGNIPTEKQMQVLHERFLSCFEPAEPPESIPLIPHMGEPVFLSRYAPASEGMDMDRCGLVETWLLPESDTAENLMDAFLLEEVLLGHDASPLSKALLHSDFGTDLYVYNGCQADLKNILFFIGITGAEKGREREFKNFLHKTLQGFIEKGIDKKDIDSALNSIEFANREIRRGSGPFSLTLMQRSLRGWIHGKGPESSLRYIPAFEKLKAAIKTNPQYVERLIDKFLLQNKHSAMLSVFPDEDFSATLDAKLQKIAEAYEKTLTKEMRIKLQKEQEILLERQKEVDSEEKLALIPHLKKSDLPVPRPAIEETMQFFGEVPAIIHELPTNDIAYLQLAIPVDNFSMEEALYLPLYANALTGIDTHTLSWHEVSSELAYLTGNFSVSCVNAGDLNVQELPLLQNQTKLLREEVVGRSWLLIRAKMLPELIKPAVDFIFQYLKTAAFSDRKRLKDLLVQQKNDMDSAPAHSGHLLMLFKTTSLLSPVKAIDELFSGAAQIRFLRKLHASCAEQDFPESEAEKLKSIHAKILNSGMLVLLCGTAENLKVFAEALPPHLSGLKKPAPGKNLHVEVKTNFFAKQQLTLFPSALQVGFTAVSFPHFSLSDKQGVEAVFASWLSAGPLWERIRIIGGAYGAFTAPEPIESIFSCATYRDPDPLHSVSQIIESIESCATEKFDAPTMERLITGAYSTTVTPQSPTQKSQTAFVRFLNGMSEAVRLRNIQNLLNTQGSDMNRCAELLLAQKSCIEGAALGSDTQLRHTEEAARFFAKMQCEQPI
>NZ_CP054692.1|WP_047170261.1|2471583_2472417_+|HAD-IIA-family-hydrolase
MIEKKEVDNWNANIDICALLERCKHFVLDMDGTFYLSDTIIPGSLHFIEQAKKTGRDFIFFTNNSSKNPENYIDKLAKMDCKIGREQIMTSGDVTIEYLQTNYPEKKVYLVGTEPLVQSFATAGIALVEENPDIVVLGFDQTLTYEKIKNICNFIRAGAMYFATHPDINCPVKGGYIPDVGSFMAMIELSTGSKPNKILGKPYKTTVDMIVHRTGWKKEAIAFVGDRLYTDVATGVNNGAHGLLVLSGESDMHTVQESNVKPDAIFLDLKEIAAYLR
>NZ_CP054692.1|WP_024753228.1|2472488_2473808_-|TRAP-transporter-large-permease
MFFLQPMFPILILFILFFLNVPIALSLIGASLYYFAFINTGIPMSMVVQQFITTVESFPYLAVPFFIMLGSVMNYSGISDKLMDMAEVLAGHLKGGLAQVNCLLSALMGGITGSANADAAMESKILIPAMRRKGFPIGFASAVTAASSAVSPVIPPGNNLIIYAMIANVAVGDMFLAGYTPGILMTISLMITVYIISSRRNYAPTRDRMASIVEIGKQILKSSFALVIPFVIILGMRMGVTTPTEAGAVAVLFALVVGITAYRKLSWKHIPLILKETVQSTGSVMLIIASAKVFGFYMTSERIPQMVTQMLLYMTEDKFVLLMVINILLLIVGMFIEGGAALVILGPLLVPVVLARGVDPLHFGVVIIVNIMIGGLTPPFGSMMFTVCSIVNCTLQDFIKEVWPFIVALLIVLLLVTYSESIALAIPKFFGYVPIHAPM

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Crispr_ID: NZ_CP054692_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_16

2506257-2506342

Orphan

Consensus_repeat	Method
TAAGCGGCTTAACAAGTTTGAAA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP054692_16

>merge|NZ_CP054692|16|2506257-2506342|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAAGAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCGTAAGCGGCTTAACAAGTTTGCAA

>NZ_CP054692|16|16|2506257-2506342|CRISPRCasFinder
TAAGCGGCTTAACAAGTTTGAAA	GAGCTGTACTGCAACAACAATCAGCTGACCTCATTGGCCG
TAAGCGGCTTAACAAGTTTGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_148889692.1\|2504751_2506032_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|213207
NZ_CP054692.1\|WP_024751666.1\|2512221_2512620_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|273179
NZ_CP054692.1\|WP_148879533.1\|2512639_2512999_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024751636.1\|2511372_2512152_+\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|236153
NZ_CP054692.1\|WP_044634970.1\|2503149_2503536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752213.1\|2500561_2501800_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586
NZ_CP054692.1\|WP_044634969.1\|2502633_2503017_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752208.1\|2491705_2493511_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP054692.1\|WP_002696696.1\|2506969_2507542_+\|3'-5'-exonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP054692.1\|WP_174897197.1\|2510315_2511359_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002697435.1\|2513334_2513526_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148883995.1\|2513522_2514320_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752212.1\|2499044_2499797_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226963
NZ_CP054692.1\|WP_002698061.1\|2497003_2498008_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_CP054692.1\|WP_174897095.1\|2514341_2516024_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226810
NZ_CP054692.1\|WP_148879628.1\|2493888_2495142_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP054692.1\|WP_024752207.1\|2489985_2491692_+\|serine-protease	unknown	unknown	gnl\|CDD\|223343
NZ_CP054692.1\|WP_174897198.1\|2516056_2517514_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377413
NZ_CP054692.1\|WP_024752211.1\|2498004_2499048_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_CP054692.1\|WP_002696692.1\|2508513_2509317_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_148889692.1\|2504751_2506032_+\|AAA-family-ATPase	gnl\|CDD\|213207	cd03240, ABC_Rad50, ATP-binding cassette domain of Rad50. The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.	4.39719e-06
NZ_CP054692.1\|WP_024751666.1\|2512221_2512620_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|273179	TIGR00621, Single-stranded_DNA-binding_protein, single stranded DNA-binding protein (ssb). All proteins in this family for which functions are known are single-stranded DNA binding proteins that function in many processes including transcription, repair, replication and recombination. Members encoded between genes for ribosomal proteins S6 and S18 should be annotated as primosomal protein N (PriB). Forms in gamma-protoeobacteria are much shorter and poorly recognized by this model. Additional members of this family include phage proteins. Eukaryotic members are organellar proteins. [DNA metabolism, DNA replication, recombination, and repair].	1.84771e-35
NZ_CP054692.1\|WP_002698061.1\|2497003_2498008_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	5.71106e-121
NZ_CP054692.1\|WP_024752213.1\|2500561_2501800_+\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	4.04346e-35
NZ_CP054692.1\|WP_024752208.1\|2491705_2493511_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP054692.1\|WP_002696696.1\|2506969_2507542_+\|3'-5'-exonuclease	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	7.27903e-23
NZ_CP054692.1\|WP_174897198.1\|2516056_2517514_+\|hypothetical-protein	gnl\|CDD\|377413	pfam04860, Phage_portal, Phage portal protein. Bacteriophage portal proteins form a dodecamer and is located at a five-fold vertex of the viral capsid. The portal complex forms a channel through which the viral DNA is packaged into the capsid, and exits during infection. The portal protein is though to rotate during DNA packaging. Portal proteins from different phage show little sequence homology, so this family does not represent all portal proteins.	2.7521e-05
NZ_CP054692.1\|WP_024752212.1\|2499044_2499797_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	1.00253e-129
NZ_CP054692.1\|WP_024751636.1\|2511372_2512152_+\|ATP-binding-protein	gnl\|CDD\|236153	PRK08116, PRK08116, hypothetical protein; Validated.	1.48504e-17
NZ_CP054692.1\|WP_148879628.1\|2493888_2495142_+\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.71116e-09
NZ_CP054692.1\|WP_024752207.1\|2489985_2491692_+\|serine-protease	gnl\|CDD\|223343	COG0265, DegQ, Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].	4.44345e-52
NZ_CP054692.1\|WP_024752211.1\|2498004_2499048_+\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.68345e-98
NZ_CP054692.1\|WP_174897095.1\|2514341_2516024_+\|hypothetical-protein	gnl\|CDD\|226810	COG4373, COG4373, Mu-like prophage FluMu protein gp28 [General function prediction only].	9.39337e-32

>NZ_CP054692.1|WP_148889692.1|2504751_2506032_+|AAA-family-ATPase
MLLKNIEIRNVRKIKQAEIEFHGAGVQVIQGLNKSGKTTIAQSIALTLGGSKDFVPGMISAGEEQAEIIAYTDDELKIRTLIGEKVTQDVSQLDELTGRYAKVSGGVRAFLDSIRSGLEMPFAIKDWTDESIIELLKERTGTSEKIALIDEELKRLEEARTQTGRDKKRLGTPTPVPKVEHAKPIDELQAEKEKAQNFLSTLKNAFSNINQEMHTLNIESESDIDAAIQRLELAKENLHKWLSKNHKQYSKEDIAEIDAAILEWNKNETAANAYDAYIAACDEIKKLEDEYNGLTKKIEAKRQERKDTLASMDLGVSGLEINEDNQLVHNGAIRGITKTNTIGNWSTAQSIQVFFSLGVRFSGEMKVMVVDNAESLDEAHTAIISEWAEKSGFLVIMLKVGDVPEELEEGIIYLKNGEVVANEYRI
>NZ_CP054692.1|WP_044634970.1|2503149_2503536_+|hypothetical-protein
MSEPITKVSETISFEDDCTFGNVETKLSNGWTVTQKFSWSFDSYYEPEIDYQCEDVGDLSIFDKNMEPYSNELTSEEEKALARLCIKDADELTDAVYQQTDWKSLAEEVREYNKNPYSYYGVTPLDFI
>NZ_CP054692.1|WP_044634969.1|2502633_2503017_+|hypothetical-protein
MNIEEIKKLSLNRRKTIAKSEKTPQNILLSLAASDPHRYVRGAVAENINVTADILEILLEDDDLYVRNKARERLGLFKLRLSEEREKTIEEKAEDIEDECDCLADFEARKKEQERWAKGAEICIPFK
>NZ_CP054692.1|WP_024752213.1|2500561_2501800_+|OmpA-family-protein
MRICFKKILAVLLLVLNTAVMQAEIFRFKFKDGESYRINSLVIEDVFVNNFFSHTAEITNRITVDISDVKPESAENRLSALHTCTFMTSERNLHKTFRWGRNYESVFRRDDLGVYTIEPKYFMPVVRNVPVFPEKDLKPGDTWEFEGEEAHDLRDGFDIQTPFRVPFTVAYTYKGEIEKGGKKYHHIIAEYNLLYNVPPQLIAKNQHKLPTLYPVRTIGYSKQDLYWDNEAGNLPKYTETFKIQLMLNSGRTLTYEGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISIENIQFEADSARLLSSEKEKLQKIGRLLQDFPDKELLISGHTALRGTAAERQKLSEERADSVARYLEEIGIRDTQHLYTRGFGARRPLAPNTNEENRARNRRVEITILEK
>NZ_CP054692.1|WP_024752212.1|2499044_2499797_+|ATP-binding-cassette-domain-containing-protein
MIEVKNAKKKYSKEVQIGPLTINIPEAGITSLVGPNGAGKSTMLLMIGRLLGLDEGQILVAGLDTVSANSEALAKVLAVLRQENLFVTRLTVRQLVGFGRFPYTKGRLNKVDEKIISKYIDFLGLTDLENRYLDELSGGQRQRAYVAMVLCQDTDYLLLDEPLNNLDVSRSVQMLTHLRHAADEFGKTIVMVLHDINFAARYSDRICCMKEGKIVEFGTPAEVMQGEKLSKIFETKIEIIQGPYGPIAIY
>NZ_CP054692.1|WP_024752211.1|2498004_2499048_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTNNNLTQTCLHNGKRSAKAFRSAKEQRHYFYILFAFFALGLLASYGLLVYKNPVPVSSPSFLPVVKRRMIAVTAMIIAATCHGLSTVAFQSVTNNRIITPSLLGFEALYSAIHTSTIFFFGITGLMQFTGIYAFIIQIVIMVGVCLLLYGFLLSGKYGDLQLMLLVGVILGTGLRSISAFMRRLLAPSEFDILQARLFGSVNNADPVYFPVAIPLVLVTSILLLFYSKKLNALSLGRDVCTNLGIPHKRCVIYTLILVSILMSVSTALVGPITFLGFLVAALTYQIAPTYDHRYVFPMVLAVSYTVLTGAYFLMYHVFSAQGVVSLIIELFGGLAFLIVILRKGKL
>NZ_CP054692.1|WP_002698061.1|2497003_2498008_+|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MTTQPTVEAEKPQRFDRKLWTPAFFIAVVVIIALGVASLFTGVYDIHGQKDGWQMFFITRVPRTISLMLTGAAMAMSGIVMQLLTQNKFVEPTTTGTIEWAGLGLIFVYVTIPGPTLMQRMTGAIIFSFVGTMIFFLFLRKVRLRSSLIVPIIGIMLGAVVSALSTFIGLVFSMTQSLEVWFAGSFASVQRGRYEYLWIIIAITVVVFIFADRLTVAGLGEDIATNLGLNYNRIILFGTVLISLAVGIVAAVIGHLPFLGLVVPNIVSMFRGDDLRSNLPWVCVLGMGTITLCDIIARTIIMPFEVPVSLILGTIGAAVFIGLLLKQRRRKIKR
>NZ_CP054692.1|WP_148879628.1|2493888_2495142_+|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGIYSPKKRRTRKKVHKTRERRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRGITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNHLFKIEQNKFGAGTMVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP054692.1|WP_024752208.1|2491705_2493511_+|elongation-factor-4
MFNPDNIRNFCIVAHIDHGKSTLADRLIEKTKAVSERAQRAQMTDDMDIERERGITIKSHAVRIPYTAQDGKAYILNFVDTPGHVDFTYEVSRAIASCEGAILIVDASQGVESQTLSNMYLALEHNLEILPVINKIDLPAANIPEVLHQIDHDLGLDSEQAVPVSAKTGQNIDALFEAIVTHFPPPTGSDNNPLQALIFDCNYDPYRGVIIHVRVFEGVLKPGMTIRFMNNKAEYKIEETGVFVFALVATECLHAGEVGYIIAGIKTVSDVGVGDTITDANAPCAEPLAGFKEIKPVVFSSVYPVDTNDYEELRESFEKLKLNDASLSWEKDSSLALGHGFRCGFLGLLHLEIVQERLEREFDQSVIFTAPSVRYQIHLRSGETIICDNPADYPDETKIASADEPYIKAMVITPTEYLGNIMSLCMEKRGVQAGMNYLDEKRVEMIYEMPLAEVLFDFYDRLKSVSRGYASFDYELIEMRPTDLVKIDILINGKSVDALAQLAYRPNAYKKASHVCAQLKEEITRQQFKIAIQGAIGNQIISRETVNALRKDVLAKCYGGDITRKRKLLEKQKEGKKRMKMIGDVELPQSAFLSVLKTNTD
>NZ_CP054692.1|WP_024752207.1|2489985_2491692_+|serine-protease
MTKYKRNILSVFFCTVLIISCKNFDTVQSTGDFSKTASINYEISLARKNFADKPLQGLCRAKVLLQNTSDNADVLNLYRDAVQNAQKAFLSAAEKKDWYTALIFYQSLQSLGEAPQNWTEEKIRTAQKATWKELHRDILLEIFEDTKATPQDEAPSIQTVAKMIKGTTTVWVDKGIRVEKGRGFSDKILGSGFFIDKRGYFITNYHVIQSEVDPEYEGYSRVYIKPSANKNVKIPAKVIGWDSIFDLALLKTEIEPEVVFKLGSSEGLSIGSKIYAIGSPAGLDKTLTSGIVSAKNRKLFSLGDALQIDASVNPGSSGGPIVDEKGNVQAIVFAGLESLEGLNFAIPVEFLKLILPDLYRGGKVEHSWLGAFGQVLAPRALSNTKGVKLLYTIPGCPAALAIVPEQSIITAINDTPIDTIEKLQQELLHYSPDTIIKISGYALQDKNKPDTIDSYVKKDWFVQTAARPEFPVKLIYEKDLSYRAFTPLFGFEFGSTGKKNTYRVERIVSGTFADENEFTQGDVIEIQRVRINEENKVVIADVYAKRRKAGYFDSFMQFGQYLDNPLFF
>NZ_CP054692.1|WP_002696696.1|2506969_2507542_+|3'-5'-exonuclease
MNTIWCDTETTGLEPENSGAFEIAFIFAGKGKVTCERLFKLNPLNETILYHEEAAKTHGVSEEEIRSFPPAEEIVPNIANFFQQAIHVFGDGEKLTFAGYNCNFDYRHLEALFNRCGLTLADYFSKQFDALEFVKKATRQKAIPRLENLKLGTVCKSLGVNLENAHTALADIQATRALCIELFKRGVKVE
>NZ_CP054692.1|WP_002696692.1|2508513_2509317_+|hypothetical-protein
MKVTGQYLARKVYSNNVHFVMLKIDDKKQADLLDTLFKRKAERDARAGHESLLNVSFNLQYREKSYKQLRTVFALVTAIFISMDGRLPTEEEKYALYLDLLDVYALKTPSKIKPDTLRTIHLSESNTFEAAHFINGLMLHLATECDLDLDLQSDVKNLLWEWELHRGGEEKDPLDYYDTECTQLISEADWRELHQYSEASGLHEAIHLHHIVTRGANAAAIDKAWNWCALTSDEHEQLHHYGEKAFLKKYPHLEGKFKRAHRMAGKL
>NZ_CP054692.1|WP_174897197.1|2510315_2511359_+|hypothetical-protein
MKSNFKSCIFSETTKKQIDAMTDINMKLRFYEAVTNYGIYGIDPDFEGIDLLIWIPMKDIIDNATNKRGAPVGNANAKKANNKTSDSDTEQEKQIKYNETKKLPKNIESNSEQKKQMDLIENKENNSKQEKQIKQLNSIKTNKTIRPNDNDNDNVNVNDNVNDNVNHPPPEDTAGQDIYTCSDKQEDEEVFSDFSENENLTQLAKDIYGVFVEAGINKPNTFLLFLQRDFQLGLDKLREQAIPVTPDILAACKNYAKVLALKKQQATWWNFTGGFDGFCGKNIILKFLPERFTLTQFEKNNRSPQAEKDYSKQDFSQSSIDEFFGKPQPPPQVVSADVGDELEGVMF
>NZ_CP054692.1|WP_024751636.1|2511372_2512152_+|ATP-binding-protein
MRVLKQGKWQQVNITQSFLPDYLRQSKALCKTHGEYKCLIDTRTNEASPCPLCEQDRERAELETQKELEQFEARLKKIDGLPKRYRNAGFKNFVVDEKNKTARDSVLSFAKNPNNKWLLLLGKNGTGKTHLAHAVLKLTGGIFRDFDDVSTDLLDAQAGYGAGLNKTLDKYANAPMLVIDEIDKVKNTEGRITWLNTILRRRYNEMLPVVLVGNIDLERLCQIIDLHGGEAMRDRIKELGIVVNFNFESYRPVLRNEKE
>NZ_CP054692.1|WP_024751666.1|2512221_2512620_+|single-stranded-DNA-binding-protein
MTDLNKVMLVGRLVRDIELRYTASGTAVGNISLAVNQSRKVGNEWQNEVSFFDCRLWGKTAESLQQYLTKGKQIAIEGSLKQERWEKDGKTQSRVIIDVQFVQLLGGNERASGNSGGVLGNYNAADEEAIPF
>NZ_CP054692.1|WP_148879533.1|2512639_2512999_+|hypothetical-protein
MKMDLTKKINDLIKAKDEHGLDALINKHGGHIFKAECLTAVDLVGIKGECFYSDSFEEALKKTKDYLRPLQQKEASLLISLELITKIFGGGLEYCCYLHFIRLQLFLICLYYKKYYLNS
>NZ_CP054692.1|WP_002697435.1|2513334_2513526_+|hypothetical-protein
MIVCPSCKKPVKYIASKDNTILIVNVELKTLVNERGRFIQGYELHECPSEVAAKTIPTAEAQA
>NZ_CP054692.1|WP_148883995.1|2513522_2514320_+|hypothetical-protein
MKKEKETPPEKKPKEKLKKTTAAKTSAAKKSVKKEASLSKNDVLISMETFDVGDAKITEKEKRFVFWYTYPGSDAFMVQARAAELAGYKSPTSEGYRLRKKDTVAKAIRYVLDTNIKKDLDEEYYKILELKKRRIHYDLADYVKKEQKTIITKEGIEKIIEIEELKDLQDLTPQQRQVIDGLDLKGGNNTWVYIFADRDKAMADIIRIREKLFEREQGDEGDNIEFVAEIIKEGLALKVSARNKKRAISESADFLELSNEGSEEL
>NZ_CP054692.1|WP_174897095.1|2514341_2516024_+|hypothetical-protein
MPIFAYIFAVFYPLFSVLCRTIAGGGGIKMGALFTPDERLNYTDAFIKVDEKPIDLDFWQERFLMDAQRHSIVLKSRRTGFSFITALKGLVKAMDGNRTKYVRQFVSYNEEDAKEKIQYAQEFYASIHPKAKKKLRSCTKTAMEFYDKSGKTVSRLISIACRPPRGRGGDIVFDEMAIYPENKAEVIYTAGIPVTARGGCVEIGSTPLGKIGRFYDVFIDKKKYRTYNRYTIPWWFSAALCTNVEEAVRNAPAMDTEERVYRYGTPPLIEAFEAMLLEDFQQEFECTFIDSALSFITLDLIYANTPGMRAEDRTEEIRGGNIEDADIEDEKDLEIKIFRTSDELCAGYSREEHGALYLGYDVARYRDAAVIYVLGVVDGKKKCVAEIEMKNKKFEYQRDEIRKIMRQLPVVRGCIDRTGQGLDTTETLQKEFGESKLEGIDFTTPAKEVLAMGVRTGLEKREFLLPNDQKFRKQIHSIKRIPSAGGSFRYDSTRDKDGHADSFWAFALANHAIIGNTAQATTGFYQQVKQRNEAGKKETKKSSSRRTRGKTLAQIDKKIK
>NZ_CP054692.1|WP_174897198.1|2516056_2517514_+|hypothetical-protein
MRKQNKKNKRKDKIKKAVNTGLASNEVQVVEKAVAPNQIKTEEIDVDKMVRKQVARRTAFSQQSALFGTVDKQKGLQSLFYDPLQMNTNAWGRVRTLSPYYGRQISYRILRRVSEKAWVLNLCISNLIRKVRPFLKVSTDENTRGFRIIAKSAKDKKEGMNEREWKTAEVLADFMLKTGDIQDNNREDDLDAYASKIIRDICQLDQISTELQRTRSGELGAFWAVDPATIEMSLPQSEEETGIKYVQVINNIPYAFYSRSDFIFTCMNPRTDVERSGYGYSIVEQAIDLITSSINTFMFNAGFFVENKLPRGMLLLNGDADLDEVEEIEDYIVNLMSGAPSSQWRVPIIPSGKSAGGESNRRFEWINLQGSNKDMEFQSWFDLQLSGIVGLFGFSMEDLGLHSQKSAPLIGADVSPKLEASKSLVLGDMLSFLQKHLNKILQEKNPDYEFEFVGYEKSDSRLVLEIDRSEVERLKQSMKSALKKA

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Crispr_ID: NZ_CP054692_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_17

2556025-2556176

Orphan

Consensus_repeat	Method
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP054692_17

>merge|NZ_CP054692|17|2556025-2556176|CRISPRCasFinder
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTTAAAAGCTTCAATTTTATAAAACAGTGTTGATGCTTTTAAACATCGTTTAGAATTGAGCACGGGCGAGCCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT

>NZ_CP054692|17|17|2556025-2556176|CRISPRCasFinder
GCACGGGCGAACCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT	AAAAGCTTCAATTTTATAAAACAGTGTTGATGCTTTTAAACATCGTTTAGAATTGA
GCACGGGCGAGCCCTTAGAATTTTTACCTATGGTTCGCCAACGAGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002699426.1\|2569232_2570639_+\|NFACT-family-protein	unknown	unknown	gnl\|CDD\|224212
NZ_CP054692.1\|WP_024753218.1\|2562402_2563224_-\|4Fe-4S-binding-protein	unknown	unknown	gnl\|CDD\|224069
NZ_CP054692.1\|WP_174897217.1\|2549851_2550676_+\|baseplate-J/gp47-family-protein	unknown	unknown	gnl\|CDD\|377414
NZ_CP054692.1\|WP_024753220.1\|2560487_2561384_+\|dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235982
NZ_CP054692.1\|WP_024753214.1\|2567472_2569233_+\|aminopeptidase-P-family-protein	unknown	unknown	gnl\|CDD\|238518
NZ_CP054692.1\|WP_148879633.1\|2560113_2560491_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234601
NZ_CP054692.1\|WP_174897216.1\|2548459_2549824_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897213.1\|2547337_2547868_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752184.1\|2558710_2558992_+\|transposase	unknown	unknown	gnl\|CDD\|366690
NZ_CP054692.1\|WP_174897220.1\|2553865_2554774_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376217
NZ_CP054692.1\|WP_174897314.1\|2563260_2565345_-\|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|236148
NZ_CP054692.1\|WP_174897218.1\|2551030_2552938_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173412
NZ_CP054692.1\|WP_174897214.1\|2547824_2548145_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024753216.1\|2565550_2566690_-\|alanine-racemase	unknown	unknown	gnl\|CDD\|143481
NZ_CP054692.1\|WP_024753219.1\|2561424_2561991_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|273579
NZ_CP054692.1\|WP_002695630.1\|2545861_2547331_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897219.1\|2552962_2553856_+\|leucine-rich-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|275380
NZ_CP054692.1\|WP_174897221.1\|2556263_2558636_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148878928.1\|2554775_2555972_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897215.1\|2548148_2548487_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002699426.1\|2569232_2570639_+\|NFACT-family-protein	gnl\|CDD\|224212	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription].	6.29343e-43
NZ_CP054692.1\|WP_174897217.1\|2549851_2550676_+\|baseplate-J/gp47-family-protein	gnl\|CDD\|377414	pfam04865, Baseplate_J, Baseplate J-like protein. The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologs, which are thought to have been horizontally transferred.	6.90022e-17
NZ_CP054692.1\|WP_024753220.1\|2560487_2561384_+\|dihydroorotate-dehydrogenase	gnl\|CDD\|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	9.57582e-164
NZ_CP054692.1\|WP_024753214.1\|2567472_2569233_+\|aminopeptidase-P-family-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	1.7573e-115
NZ_CP054692.1\|WP_148879633.1\|2560113_2560491_+\|hypothetical-protein	gnl\|CDD\|234601	PRK00054, PRK00054, dihydroorotate dehydrogenase electron transfer subunit; Reviewed.	1.79158e-46
NZ_CP054692.1\|WP_024752184.1\|2558710_2558992_+\|transposase	gnl\|CDD\|366690	pfam01527, HTH_Tnp_1, Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.	2.32031e-06
NZ_CP054692.1\|WP_024753216.1\|2565550_2566690_-\|alanine-racemase	gnl\|CDD\|143481	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase. This family includes predominantly bacterial alanine racemases (AR), some serine racemases (SerRac), and putative bifunctional enzymes containing N-terminal UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase (murF) and C-terminal AR domains. These proteins are fold type III PLP-dependent enzymes that play essential roles in peptidoglycan biosynthesis. AR catalyzes the interconversion between L- and D-alanine, which is an essential component of the peptidoglycan layer of bacterial cell walls. SerRac converts L-serine into its D-enantiomer (D-serine) for peptidoglycan synthesis. murF catalyzes the addition of D-Ala-D-Ala to UDPMurNAc-tripeptide, the final step in the synthesis of the cytoplasmic precursor of bacterial cell wall peptidoglycan. Members of this family contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. AR and other members of this family require dimer formation and the presence of the PLP cofactor for catalytic activity. Fungal ARs and eukaryotic serine racemases, which are fold types I and II PLP-dependent enzymes respectively, are excluded from this family.	1.28689e-171
NZ_CP054692.1\|WP_174897314.1\|2563260_2565345_-\|ATP-dependent-DNA-helicase	gnl\|CDD\|236148	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.	4.67792e-141
NZ_CP054692.1\|WP_024753219.1\|2561424_2561991_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|273579	TIGR01367, Orotate_phosphoribosyltransferase, orotate phosphoribosyltransferase, Thermus family. This model represents a distinct clade of orotate phosphoribosyltransferases. Members include the experimentally determined example from Thermus aquaticus and additional examples from Caulobacter crescentus, Helicobacter pylori, Mesorhizobium loti, and related species. [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis].	4.1679e-68
NZ_CP054692.1\|WP_174897218.1\|2551030_2552938_+\|hypothetical-protein	gnl\|CDD\|173412	PTZ00121, PTZ00121, MAEBL; Provisional.	4.15533e-10
NZ_CP054692.1\|WP_174897219.1\|2552962_2553856_+\|leucine-rich-repeat-domain-containing-protein	gnl\|CDD\|275380	sd00033, LRR_RI, leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.	2.42563e-26
NZ_CP054692.1\|WP_024753218.1\|2562402_2563224_-\|4Fe-4S-binding-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	4.79814e-07
NZ_CP054692.1\|WP_174897220.1\|2553865_2554774_+\|hypothetical-protein	gnl\|CDD\|376217	pfam18798, LPD3, Large polyvalent protein-associated domain 3. This domain is predicted to adopt an alpha and beta fold. The secondary structure arrangement suggests it to be a member of the BECR fold. The domain is found in polyvalent proteins of both conjugative elements and phages/prophages.	2.57133e-19

>NZ_CP054692.1|WP_148878928.1|2554775_2555972_+|hypothetical-protein
MKKNPIGKRLKEYTASAINTGGEVYEKIMASGKEHAEEQGAIENALCQLFDFIDYYRQPEIFNHQGTHLLKGLNFFSGLKKSRQEPYSSTKHKYKAMMIRVDDDAPLDTVWGTKWNAEHALRYYFNNDDCFVMEFTNEQEKNLLKNQFISDGWQVDGLPVEKSPHLNDQASLVNVNGIRMINNTVLQTAQAVRIAKGIYSLHFFIRGAMRNSKGVWQGKLNLKIVRKDGAAIFTKTYSCGMHWENIQEHLYFEQDGEYDCIFTCEKNVDIDFINLFPEVPYPSLSILIGHGGMRDLFSIFFAPHVADPKDKDDEKNFKDNEFIVFDLLDKYKFWFPFADDSESKRERLRLKIDFNDKHWGYWTEDIRWLDLLYVSALLDSLLPVGVKVFTIISSRRGS
>NZ_CP054692.1|WP_174897220.1|2553865_2554774_+|hypothetical-protein
MRIVTGADVSKQIIHTLKSLSEQQCFTEILERMQKTFVESKHPRDEEGRFTDKREEKTCLKENISSASDVKQALEAIKNTDIVNKKTGIIARISSTGINKMISNKAVEKSEANGFTRQEHYRAAAQIKDLFEKAHLIEARADKNNDPNIQSIKRFYSSVVLEDGREGKALITLKETYQSGHRIYTVELNRIIKPIDMRKAVAQYAQSAYSPSTSKGWETTDTHARTRTEQKAPTDFSIPHSKKKARAQNAALPKDFVSRCNMVSIQLMLLKWDIAAIQEETDRRNKIVQELKKTQGSKQRRL
>NZ_CP054692.1|WP_174897219.1|2552962_2553856_+|leucine-rich-repeat-domain-containing-protein
MITINGTEITELKYNGVEIEKAICNGVVVFEERKKNPGDISIKTSADSIKLRVTTKDGSPCELWNGAKKIAEMQSGTHQTVSIPNNAEEILIKGKDIQGLDCPNNRLTALDVSGCTSLQRLECYNNQLTAFDVSGCTRLQRLHCDRNQITSLNISGCTSLQHLYCYYNQLTTLNVSGLTSLEVLECYRNRLTTLNASGCTSLKRLVCFNNQLTSLAVSDLTSLQWLDCSNNKLSAEVFKKLFEDLPERKEKDGRVLLYKDGDSNYKDFPQPPELAAAFKAAKEKGWKFYKNNWSTEI
>NZ_CP054692.1|WP_174897218.1|2551030_2552938_+|hypothetical-protein
MTIQDFFSTVKTNPFEIVKASDMDVGFQSIVDNASFLARLAVQAEHDFIIGGQVTPIKDSLSVRVSPFIAFNKKTQRLLCKGTETIVELKAAHATKNRRDVLFITEKGWVDFKKENRARWFVARGNAGQTGQENSGFAKVEPLNKRQAFKVALAVISGENNSGTAKYCDEECVKLGEISVKASQTKFGKEDIFAVSALAENEENAGWTNETMRTFSLAPMSKAAMRFFKIHKPDGTLKDGVVGKSNLALSGGDMLTGDDIVIGKKIAVKAGSINPATGAFEYTIPFVGTERLEFTIFESAKIKEVFDVVFNAFAYVWKTFIANDAAVYRYAQGYTDLGIADLNKVFFEALQKEIQERIAAIDKEAKERKEADAAIKTFAEEAIAQEAQERKEADEKETKERKEADAEIKTFAEEAIAQEAKERKEADEKETKERKEADAEIKTFAEKAIAQEAKERKEADEIEAKERKEGDKQIKELAEEAISLSVPEGSTLGIYDDEEHKTFLKLDGKSFEPAEYPRFYEYWKEHLAFLGEDNEKKPFLPETADYTRLGEVVSFIGTDYHHEFLLCDGGPFSPDVYAEFYEQYWKKHLSHLGKDSIGWPLRPKLEGSIAGSNVYIKALPHVEHEFITPVIKTGK
>NZ_CP054692.1|WP_174897217.1|2549851_2550676_+|baseplate-J/gp47-family-protein
MDFDYKIKTFDEIYTEMQLKVFGKILTATDANSGSVLCSLLEATARLIAEAYLHCQIGYAKYLQDLVEGAFGVKRLLGTKAKGKVVFFTEKGKPAASHLYIAVGTEIACGDTVFVTTESGMIDKGTEQSNPIFAEAKEIGEKGNVPSESVDTILSGLHSSIAGVKNIRPFENGTSAETDPELRKRFVNYLRGLQRTNFYGVKEAALSTKAYHVNVVLCAPPKDIPTRDFDGNPITEHNVNCAVYVCDKEGECSGALLDEVRKTLRGDGTYNNPG
>NZ_CP054692.1|WP_174897216.1|2548459_2549824_+|hypothetical-protein
MLEKYKGNINTLGKKILLYDLSKHTNRSRRKKTIDSFCWQVYPGEFKIKRTKEKPNVYTYSIEFTAIPAKDTFVFYNTIFGVDFNKAFDAIEQYLQKLEKSLSFFKSVLEKINEARRFAAACKEVALYAISGTINAFRILLDDTFQLGHSAIALYRETVGAEGIPALIFETGDFVAAMLIDFMTNINVLANNIHAMSKKEFYIPAGVFEDWEVTIEELDALSQLQCSGIYNELCALSVSAQMERPKEYTLPVARGAAITTYGMQIGLITDGMSFESIAQNHYGDSSKAYIIASANSAGSIDDLSARGQKNVLIPVLERSASNYQNRIIGLSGQRDNYGVDIALDENGNILLNELQTDFKFVTGRRNISQAVLMRLRENINKRVMLQLYGIKTTIPDSESAGSAYILSSIIQTLKQESRIKELLSVSFKGDGDALRIDIEYTDIGGQRRSLSELI
>NZ_CP054692.1|WP_174897215.1|2548148_2548487_+|hypothetical-protein
MRQGYLREGLWQNVYLIEFYVDNNTSPSESFAFGVPPESEEFVLTQRKTETKTFGGLVIDDYGHDALKITLSGSTVNNELRRMYHTTGRVSMLPAKKKYLGSKHCLKNTKVI
>NZ_CP054692.1|WP_174897214.1|2547824_2548145_+|hypothetical-protein
MITIKRKKVANITIDKDGNIAVKAATDKKISLNGENLSGIVKADELKTQLDKMSDRIDKMVNTFNGWVVLPNDGGAALATAMKTVIGTMVKEDFSNIKNDKVVHGD
>NZ_CP054692.1|WP_174897213.1|2547337_2547868_+|hypothetical-protein
MRIVIRERSGQVTGQVPLQNTVPRIGMWGTVTDVDSTRNAVNVRLTGGVLLEDVPVASLDEWICEFKDEGYLSGSRNLPPENARVFVLMPTGTFEGAFVLCSSLSMFEKEHQKKFMSTKEQRTEKNVERLRVRPGKWIEKYNYKTGQLELTSSNENVKIAIADDNNKKEEGCKHYN
>NZ_CP054692.1|WP_002695630.1|2545861_2547331_+|hypothetical-protein
MMITIHKSPQPKIEIFDYNAPTVPAFTLSAQTHEYTQLLSYSFTESTMDLKGRFQFSIAGGDNNLFNEIQPLQIVKIYEGANTPVFIGVIANKDLSCTMSQGGVQRQINFSGMSITGLIANFQLILDIKFLSLTQIMSAETINKDMVLRINELQTKEPLKIKKFLELTWDTYLGYVGVRYLKPTADKAPVKGKAGESNKIVYDIIKNFMGNDFFEVGEAESIPVPIANTFFNQGINTVQQIWQTILAPPVYEMFSRVNEKGKTKIVVRELPFSFRENGIVHNRWGKLPIRKIKSPHLVDYSLRLSIDEVYTTFFAYIEGSSLSADQYIVIEQTDGDKIEKKILQVDEKKLKTYGMKMLQVAFRGYKKQTEKTETITNAMHKLSLRLRSWFGRLDEMYTGSIRIINDFSEKQIRCGERVSFLGGEFYVRSCDHSWSYGGTPTISLQVIRGGKYNKGGEFVKVMPEMGTSNIELKFDGEETNSLVDISWAR
>NZ_CP054692.1|WP_174897221.1|2556263_2558636_+|hypothetical-protein
MAFKGRKVLTTVKVNPYEIAKASDMEFGFRSILDNFSVLLNAIGATHTPLVDEAGFNNSNELKYVGKKEKDFIIGGGLVDAGNKQLRLLPILAFNNKIGLLISDGLDKDNKPIEIEIGSGSGSFILTHEEDYLYRIESVYIGNANTGEETSGTTANIKKSDPIWDEFQTEWRGSYRVGENDTMQVSTFNKRQSQAVRLFVDFGALVPRAADASANIPDERSIWSERVKIAEVLVCFKRNETNWIYEMQPITKDDVRFVTARCYFDWRVQEEVIEKAKAADSVWVQHAKVAKPNQNAQNQKAEEKRIAGINLDNKAWRAEHYNYRWTAEHTRTYRLGSIAEINEQLYKMHKSDGDIKERVIRLDHINLRPEDPNALRAEKIPIDLVGNADIPLPYNKEIKSYDDVKKGLRAIAETLRGDLIPVGPDDGSGNSDISLPHNKKIESKENIKKGLLVIAETLIAADEKTNTVNTTLNKKIDTVNTTLNSKIDGVGEVLTNHINATNVHSATSDPTAHRIAMRDGNGRMQVASTDKNSGESIVNVNFLTREWSPDFVMKVLRTKLITNQQEFDLWVGQENPNEMYTFVYLKGEFRSKQTIDLVKIGTKEVTGYPAAKISAYSERYGRSFDTGMKGDGSNRKVMNINLLSNQSRHHDNVDIYSNGRIPDETTGFSESTCINCTANVGGASGYDGDKNIRDGTYGTGAIGFYKCDSENCTATVQGGYGGKGFGGNETWSDGGNGGNGGNAIGFSYGSVSNCSVEARGGSGGDGGQGSRFSRINPMKYAYRLGWRCEN
>NZ_CP054692.1|WP_024752184.1|2558710_2558992_+|transposase
MRRYSQEFKQQALQLSDEIGTKEAAKNLGISYGTLTDWRKTKNRYKASDGAATAKAIVLDERERQLQREIKELKEANEILQGALAFFVKGWKK
>NZ_CP054692.1|WP_148879633.1|2560113_2560491_+|hypothetical-protein
MPKPLIQRISGVQGAARTAPYFLEELSPYAEKIHVATEDGSYGSKGFVTDILNPKDFDLILCCGPNAMMQSVKKILNDTPALFSLESHMACGIGACLACSVRTVEGMKRVCREGPVFPAKEVCFS
>NZ_CP054692.1|WP_024753220.1|2560487_2561384_+|dihydroorotate-dehydrogenase
MMKVDLCGIELKNPVIAASGTFGFGREFEEYIDLSLLGGISTKGLTLEAREGNPGIRSFETPAGMMNSIGLQNPSVEVFMRHELPYMESLHTEIIANVGGSKIEDYVQSVTLLENTSIRIIELNISCPNVKEGGMAFGIKCETAYQVVSAVRKATRKKLMVKLSPNAENIRAMAASCVEAGADMLSLGNTFNALAIDIKKRKPVFNNITAGLSGPCIKPIALRMVREAAKEVDVPVIGLGGIMNWQDAIEFIMAGAAAVQVGTANFTDPTVMLKIIRGIEQFMHDEGIKDLSEIRGII
>NZ_CP054692.1|WP_024753219.1|2561424_2561991_+|orotate-phosphoribosyltransferase
MEENLQILQDCEAVLQGHFLLSSGRHSDGYAQCAKLLMYPDKAAQVLSGVVRKLKELKIDKVIGPAMGGIIVAYEIGRQLGVPAMFTERENDVMTLRRGFTVEKGDRILITEDVITTGKSSLETIEALKDFGVEIVGLAAIVDRRNGADFPYPVYAALEFNVTSYTPEECPLCKKGLPLVKPCSRKKF
>NZ_CP054692.1|WP_024753218.1|2562402_2563224_-|4Fe-4S-binding-protein
MATIKKVKAVFFSATGKTKNIILQCAKNLADNLAVPLETDDFTLPKNHTAVRQFSAEDLVVFGTPTYAGRIPNKVLPFVQELFQGNGALTVSLVTFGNRSFDNSLTELQSELTKNNFRVIGAGAFVCEHAFADIALTRPDKTDFDLLNNLCTAVLDKLKTQTDFPALAVRGNEKLEGYYKPLGLDGQPTNFLKAKPITDMTKCDRCGVCIKVCPMGSIAADDPANVFGICIKCQACLVYCHTGAKSFDDPAFLSHKAMLEKNYTAPAASEIFV
>NZ_CP054692.1|WP_174897314.1|2563260_2565345_-|ATP-dependent-DNA-helicase
MIPLDTAQIVEYLDETGSFASFFERYEVRHAQLDLTEEIANCFNNDSIGVFEAGTGVGKSLAYLIPAIKWALQNKERVVISTGTINLQQQLMEKDLPSAKKIIGKEAKDLKVLLLKGRHNYLCIRRLMQALQEPDLFNDDYDEIKKIQAWAATSADGSKAEMPFVPSDKVWAKVCAESDNCLGRRCPYYADSFVMKLKKEAAKASLLIVNHHLLFADLAARYEGYGYQTTAVLPPFKRLIFDEAHTMEDAAQSFFSKTFSQFELQRQINALYRHKKGKPIGVLPKLITIAHADEIVPEITKTLFELQTAYAVLDSEALPLCSSGAISFQQMLPYQRDALTQKLSAVRRNLEIVIQHFTALIDTVSDDEQSEDTVQDAKLILWRFRELKETAESFEQWKKLSEKVFWIEKIRSAQKETVRFHQTPLNLASLLHDAVFFPMRTVICLSATLKIGESFDYWLNRTGLNLPIDAPLITKTFPSPFPYKRNVLLNVPIDAPPPDDKEFQNWINKAIAEMIELSGGKTLVLFTSYESLKTACAHARAALKDTDLLILQQGEDDRSRLLNFFKENVSSSLFATTSFWAGIDVPGESLTHVILVKLPFSVPTDPVFKAKADAIDSAGGSSFMSLSVPEAVIQFRQGFGRLMRSQSDRGIVTLLDKRVIAKRYGQIFITSLPETRQCFDSFKNILYNIENFLF
>NZ_CP054692.1|WP_024753216.1|2565550_2566690_-|alanine-racemase
MRATKAIIHLDNLQYNIAEIKKRLKPGVKICLPVKADAYGHGAFRVAVAAIRAGVSSLAVASIQEGIDLRDAGIVAPIISLSLPILEEIHSIIEYNIHPLVIDSEFIHALNEEAARMKTVQAVHLKIDTGMNRIGCKPEDAITLAAEIVQLPNLKLEGVCTHFSVADSVSPENIAYTKKQLALFTQTLDALRAKGIDPGIVHAANSGAVLQYPEAQFDMVRPGIIVYGYPPSDCLADKIPLKPVMELVSQVVLIKCTPQGSDISYDRKWHADKDTFIATLPIGYADGLMRALSPGLKVRIGDTFYPIVGRICMDQCMVDLGSEPTVTRWDTAVIFGPSENSVKNNSAKELATIAGTIPYEITCDINKRVPRVYINEKLG
>NZ_CP054692.1|WP_024753214.1|2567472_2569233_+|aminopeptidase-P-family-protein
MTIPERLAALRKRMAEEGIDAYYIPSSDAHQSEYLPKYAKTREYISGFTGSAGTAVVTKDKALLWTDGRYFLQAEQQLHGSGFELCKMGEPGVPSIEEFFQHELRAGDTLGLDGKVTAAASYRQLKDCLPAIRFVADKDLVGSIWNDRPEPRYSTAYILEQKYTGKSVKEKLSEVRALLAEKKCDATVIGALEDICWLYNIRGSDVKSNPVLTSYAIIEKTQAKLFIDPRQMPKDVEEALRKEGVDCYPYEAVFEAAAKLDGVVFIDPSRTNIYLRNCIQAKVLEGINLTSILKAVKNETELKSIRNAMLKDGVAMVQIIKWIEENADARISECDVADKLLEFRAAQKDFIEASFGTISGYGANGAIIHYAPRPETCATLEPKGFLLLDSGGQYRDGTTDITRTIQLGPLTEEEREDYTLVLKSHIQLAIAQFKAGTPGYVLDGIARLPLWKAGKDYKHGTGHGVGFVLSVHEGPQSISNRYTINVPLEPGMVTSNEPGMYVAGSHGIRIENLTVTQVAIENEYGPFYSFETVTLCPIDTRPVIKSLLLPEELAWLNNYHKLVQEKLSPLLDAEHQAFLAERCKAL
>NZ_CP054692.1|WP_002699426.1|2569232_2570639_+|NFACT-family-protein
MSLNSAEINLILKELDIEGSYVQKIVQPSYSALVLFLYKNRAINLFIGLEGGACRLHETAKKIPKFEKPLRFMELLRSKIRGMKITQAEQLHNDRIIKISLSGGDEKLFLYIRLWSGAANIILTDSQQRIIDAFYRRPKRGEVSGALWNEPEPPQTASVFSVREYDSTKSFNQAIEEWYDQKAPKVSREALLEQAENLYGARIDKLRAVIKKLTAKRQTFSQNEQLKHQGDLLLSNLHLIKPNSDFVELEDYTAPGTVLRIQLNPQKTAKENAAFYYEQYKKAVSGLQALSEDIQAAENRIAGLQAELANIRAEENPRLIEKLLRKQPAATKQKPATQKEKTGVTFFVDDWTLHVGRTAAENDSLLRHVVKGADLWLHTRDYAGGYVFIKAKKNKTVPLPVLIAAGNLAVFYSKARKAGAADLYYTQVKHLRRAKNAPKGTVLPSNEKNLSVKLDPEILKMLESCRAD

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Crispr_ID: NZ_CP054692_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_18

2637935-2638082

Orphan

Consensus_repeat	Method
TAACGGCTTCAGCATTCCGACGGTAACGGGCACGGATGCCCGTGGTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_18

>merge|NZ_CP054692|18|2637935-2638082|CRISPRCasFinder
TAACGGCTTCAGCATTCCGACGGTAACGGGCACGGATGCCCGTGGTTCAAGGCAGCAACGGCTCAAAAACTGTTTTATCAATCTCCTCAATCTTATGCAATAACGGCTTCAGCATTCCGATGGTAACGGGCACGGATGCCCGTGGTTC

>NZ_CP054692|18|18|2637935-2638082|CRISPRCasFinder
TAACGGCTTCAGCATTCCGACGGTAACGGGCACGGATGCCCGTGGTTC	AAGGCAGCAACGGCTCAAAAACTGTTTTATCAATCTCCTCAATCTTATGCAA
TAACGGCTTCAGCATTCCGATGGTAACGGGCACGGATGCCCGTGGTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002699340.1\|2627519_2627960_-\|molybdenum-cofactor-biosynthesis-protein-MoaC	unknown	unknown	gnl\|CDD\|237733
NZ_CP054692.1\|WP_002699342.1\|2626705_2627041_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224916
NZ_CP054692.1\|WP_024753178.1\|2627037_2627541_-\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	unknown	unknown	gnl\|CDD\|238451
NZ_CP054692.1\|WP_024753177.1\|2627960_2628929_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|234672
NZ_CP054692.1\|WP_002699337.1\|2629382_2630354_-\|molybdopterin-binding-protein	unknown	unknown	gnl\|CDD\|239599
NZ_CP054692.1\|WP_174897227.1\|2644677_2646087_-\|dihydropyrimidinase	unknown	unknown	gnl\|CDD\|236240
NZ_CP054692.1\|WP_024753173.1\|2634291_2635668_-\|purine/pyrimidine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP054692.1\|WP_002699307.1\|2650325_2651219_-\|glutamate-formimidoyltransferase	unknown	unknown	gnl\|CDD\|131079
NZ_CP054692.1\|WP_002699312.1\|2647629_2648253_-\|cyclodeaminase/cyclohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377428
NZ_CP054692.1\|WP_024753176.1\|2628909_2629386_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP054692.1\|WP_002699320.1\|2642660_2643854_-\|knotted-carbamoyltransferase-YgeW	unknown	unknown	gnl\|CDD\|274517
NZ_CP054692.1\|WP_081718799.1\|2631656_2634206_-\|selenium-dependent-xanthine-dehydrogenase	unknown	unknown	gnl\|CDD\|132354
NZ_CP054692.1\|WP_024753169.1\|2640009_2641212_-\|diaminopropionate-ammonia-lyase	unknown	unknown	gnl\|CDD\|236186
NZ_CP054692.1\|WP_002699321.1\|2641319_2642642_-\|YgeY-family-selenium-metabolism-linked-hydrolase	unknown	unknown	gnl\|CDD\|183836
NZ_CP054692.1\|WP_002699314.1\|2646283_2647630_-\|glutamate-mutase-L	unknown	unknown	gnl\|CDD\|379405
NZ_CP054692.1\|WP_024753175.1\|2630384_2631329_-\|XdhC-family-protein	unknown	unknown	gnl\|CDD\|224886
NZ_CP054692.1\|WP_024753168.1\|2643883_2644549_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|377981
NZ_CP054692.1\|WP_024753170.1\|2638305_2639988_-\|selenate-reductase	unknown	unknown	gnl\|CDD\|236630
NZ_CP054692.1\|WP_024753171.1\|2636234_2637557_-\|putative-aminohydrolase-SsnA	unknown	unknown	gnl\|CDD\|235963
NZ_CP054692.1\|WP_024753166.1\|2648647_2650324_-\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_002699340.1\|2627519_2627960_-\|molybdenum-cofactor-biosynthesis-protein-MoaC	gnl\|CDD\|237733	PRK14499, PRK14499, cyclic pyranopterin monophosphate synthase MoaC/MOSC-domain-containing protein.	1.88551e-43
NZ_CP054692.1\|WP_002699342.1\|2626705_2627041_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|224916	COG2005, ModE, N-terminal domain of molybdenum-binding protein [General function prediction only].	7.65451e-20
NZ_CP054692.1\|WP_024753178.1\|2627037_2627541_-\|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein	gnl\|CDD\|238451	cd00886, MogA_MoaB, MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.	2.54483e-69
NZ_CP054692.1\|WP_024753177.1\|2627960_2628929_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|234672	PRK00164, moaA, GTP 3',8-cyclase MoaA.	1.46454e-91
NZ_CP054692.1\|WP_002699337.1\|2629382_2630354_-\|molybdopterin-binding-protein	gnl\|CDD\|239599	cd03522, MoeA_like, MoeA_like. This domain is similar to a domain found in a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. There this domain is presumed to bind molybdopterin. The exact function of this subgroup is unknown.	9.48134e-124
NZ_CP054692.1\|WP_174897227.1\|2644677_2646087_-\|dihydropyrimidinase	gnl\|CDD\|236240	PRK08323, PRK08323, phenylhydantoinase; Validated.	0
NZ_CP054692.1\|WP_024753173.1\|2634291_2635668_-\|purine/pyrimidine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	2.44944e-116
NZ_CP054692.1\|WP_002699307.1\|2650325_2651219_-\|glutamate-formimidoyltransferase	gnl\|CDD\|131079	TIGR02024, FtcD, glutamate formiminotransferase. This model represents the tetrahydrofolate (THF) dependent glutamate formiminotransferase involved in the histidine utilization pathway. This enzyme interconverts L-glutamate and N-formimino-L-glutamate. The enzyme is bifunctional as it also catalyzes the cyclodeaminase reaction on N-formimino-THF, converting it to 5,10-methenyl-THF and releasing ammonia - part of the process of regenerating THF. This model covers enzymes from metazoa as well as gram-positive bacteria and archaea. In humans, deficiency of this enzyme results in a disease phenotype. The crystal structure of the enzyme has been studied in the context of the catalytic mechanism. [Energy metabolism, Amino acids and amines].	4.43308e-154
NZ_CP054692.1\|WP_002699312.1\|2647629_2648253_-\|cyclodeaminase/cyclohydrolase-family-protein	gnl\|CDD\|377428	pfam04961, FTCD_C, Formiminotransferase-cyclodeaminase. Members of this family are thought to be Formiminotransferase- cyclodeaminase enzymes EC:4.3.1.4. This domain is found in the C-terminus of the bifunctional animal members of the family.	2.71409e-72
NZ_CP054692.1\|WP_024753176.1\|2628909_2629386_-\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	2.32528e-77
NZ_CP054692.1\|WP_002699320.1\|2642660_2643854_-\|knotted-carbamoyltransferase-YgeW	gnl\|CDD\|274517	TIGR03316, aspartate/ornithine_carbamoyltransferase, knotted carbamoyltransferase YgeW. Members of this protein family include the ygeW gene product of Escherichia coli. The function is unknown. Members show homology to ornithine carbamoyltransferase (TIGR00658) and aspartate carbamoyltransferase (carbamoyltransferase), and therefore may belong to the carbamoyltransferases in function. Members often are found in a large, conserved genomic region associated with selenium-dependent molybdenum hydroxylases.	0
NZ_CP054692.1\|WP_081718799.1\|2631656_2634206_-\|selenium-dependent-xanthine-dehydrogenase	gnl\|CDD\|132354	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase. Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_CP054692.1\|WP_024753169.1\|2640009_2641212_-\|diaminopropionate-ammonia-lyase	gnl\|CDD\|236186	PRK08206, PRK08206, diaminopropionate ammonia-lyase; Provisional.	0
NZ_CP054692.1\|WP_002699321.1\|2641319_2642642_-\|YgeY-family-selenium-metabolism-linked-hydrolase	gnl\|CDD\|183836	PRK13004, PRK13004, YgeY family selenium metabolism-linked hydrolase.	0
NZ_CP054692.1\|WP_002699314.1\|2646283_2647630_-\|glutamate-mutase-L	gnl\|CDD\|379405	pfam13941, MutL, MutL protein. This small family includes, GlmL/MutL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family.	3.31629e-159
NZ_CP054692.1\|WP_024753175.1\|2630384_2631329_-\|XdhC-family-protein	gnl\|CDD\|224886	COG1975, XdhC, Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family [Posttranslational modification, protein turnover, chaperones].	3.30633e-48
NZ_CP054692.1\|WP_024753168.1\|2643883_2644549_-\|PAS-domain-containing-protein	gnl\|CDD\|377981	pfam08348, PAS_6, YheO-like PAS domain. This family contains various hypothetical bacterial proteins that are similar to the E. coli protein YheO. Their function is unknown, but are likely to be involved in signalling based on the presence of this PAS domain.	4.36089e-33
NZ_CP054692.1\|WP_024753170.1\|2638305_2639988_-\|selenate-reductase	gnl\|CDD\|236630	PRK09853, PRK09853, putative selenate reductase subunit YgfK; Provisional.	0
NZ_CP054692.1\|WP_024753171.1\|2636234_2637557_-\|putative-aminohydrolase-SsnA	gnl\|CDD\|235963	PRK07203, PRK07203, putative aminohydrolase SsnA.	0
NZ_CP054692.1\|WP_024753166.1\|2648647_2650324_-\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0

>NZ_CP054692.1|WP_024753171.1|2636234_2637557_-|putative-aminohydrolase-SsnA
MIITNGKVITNDKNSTFYDNGAVYIKDNIIVDVGNSDEIKKHYKTETILDAKGGIILPGFICTHSHIYSAYARGISVTKPTDNFFNVLENLWWSLDSKLKEKDVELNALTTYIDSIMNGVTTVIDHHSGPQSLDGSLFIIAEAAKKLGIRTSLCYEVTDRYGDDVRDRAIKENIAFIKAAQKNESDMIKGLFGLHASFTVSDETLYKVREAMEGVYDGYHIHVAEGLEDELLCLKKYKKRIVNRLFDFDILGERTIAAHCVHINAGEMDILKKTNTNVVHNPESNMNNAVGTTNVLKLLEKGIVVGLGTDAYTNDMYESMKVAKILMSHEASDPTVGFAETKQMQFTNNPIILSKYFNKNLGVIEKGAYADIAVAEYNPPTPMHKDNWFGHLVFGLSGKQTIHTVINGKIVMKDREVLGIDVDKIMSESRIRAAEIWKEM
>NZ_CP054692.1|WP_024753173.1|2634291_2635668_-|purine/pyrimidine-permease
MEKDTKGLLFQLEGKPSLNETMPMAFQHVVAMIVGCITPALLVGGVAGANLSQDNLVLLIQMSLVIAGLSTLVQLFPIGKKIGSSLPVILGVSFAYVPTMQSVASTYSKNPAFGSEKAIGVIVGAMIVGGACALLFGMFVKYLKPLFPPLVTGTVVFTIGLSLYPIAIRYIGGGNAMAKDFANPKNLFVGFLTLAIVTALNHFGKGFIKLSSILISIIIGYLVSIPLGLVNFSKIASSSIIINQNPILHFAPQFETSVIISFVILFIVNSVQAIGDFTATTVGGLDREPTEKELSGGIIAYGITNMLGSLIGGLPTATFSQNVGIVGTTKVVNRRVFAQAAIIILIAGLIPKFGALLTTIPTPVLGGATIPVFSSITMTGIKLIAKEPLSFRNTSIIGLSVAIGMGVTAVPQLFNVEVYGPTALMVKTAIGSSPVVLATLCAIILNVIIPKKAEDIAK
>NZ_CP054692.1|WP_081718799.1|2631656_2634206_-|selenium-dependent-xanthine-dehydrogenase
MYELNINGLNYKTDKDKKLIRFLRDDLRLTSVKDGCSEGACGTCTVLIDGKPTKACIPTVAKSVGKTIITVEGLSDWEKEVYAHSFSIAGAVQCGFCIPGMVIAAKALNDTNDNPTEEEIRHAIRNNICRCTGYVKIIEAIQLSSDILHNRKSIEKEDEKTGVGTNTIKIDSYDKVLGTGMYTDDLYLENMAYGRLLKSKYPRAKVLSINTEKAEALEGVIGVLTAKDVPHNKIGHIIQDWDVFIAEGDFTRYVGDDLALVVAEDDETALKGLSLIEVEYEVHTPVSTIKQALSEDAPKLHEKGNMCAEKHVARGDAAKALENSKYIVTDKFTTPFTEHAFLEPECSVAFPYNNGVKVYSSDQSVYDTRKEIAIMFGWEPERIVVENMLVGGGFGGKEDMSVQPHAALAADKFKRPVKVKLTRQESINTHPKRHPMEAEFTIGCDENGILQGMKADIYFDTGAYASLCGPVLERACTHAVGPYNYQNTEINGYGLYTNNPPAGAFRGFGVCQSCFAIESLLNILAEKVGISPWEIRYRNAIRPGQVLPNGQITDPSTSLVETLLAVKEVYEKNKDRAGIACAMKNAGVGVGLPDKGRCKLVVKDKTVEIYSGATDIGQGIATVLVQIACETLGLKKHEVKFMVVNSKDSPDSGTTSGSRHTLITGEACRGAAALLLEDLKNSSLEELEGKEYFYEYFDPTDPLGSPKENPKSHLAYGYATQVVILDDGGKVADVYAAHGIGRAINKKALEGQIEGGVVMGLGYALTEDFPLENSVPKVKYGTLGLLKATNSPKVHSIIVEKEGIKEAYGAIGVGEITTIPTAPAAAGAYYAFDKKFRTNLPLKETAYKK
>NZ_CP054692.1|WP_024753175.1|2630384_2631329_-|XdhC-family-protein
MIETFVFARELFLKTTPFVIATIIDKKGSSPREVGASMIVTQNGLAQGTIGGGAIENEAIKKAKSLIEENSSSIEEYILTDNTAASIGMVCGGSNKIFLKYIDTKNKIYLEIFNRLIENYKEKETKLIFDLERLNIFANIDGEIFPNETISGNSFQLLVKDSIKVFVFGGGHVSKAFVKILDFLKLNSVVVEERAEFLEEKDFPNSKRILIGYEDIDTVNITSDDYVCIITRGHTSDSIVLEKVLEKNPQYIGVIGSKRKVALMFKNISDKYSKTMLDKIHSPIGLDIGAQTPEEIAISIAAEIIGEYRAAPLR
>NZ_CP054692.1|WP_002699337.1|2629382_2630354_-|molybdopterin-binding-protein
MKVIQTKDAVGKILFHDLTQIIPGKSKSARFKRGHVIKEEDIEVLLSMGKEHVYVYELDDTHYHEEDAARILAGICAGENIRLSDVSEGRINLISEIDGLLKVNVKLLHTINSMPDVMIATKYNDSVIKEGDVLAGTRAIPLIIKKEKIKNCLDSAQGEHILKVLPYKKQRVGIITTGSEVFSGKIKDGFKEVLTEKLLPFDFEIIHHSYSKDDIDSILTEIRAADKKNCDLILCTGGMSVDPDDLTPGAIKAYADHVVSYGTPVLPGAMFLVAHKNRTAVLGLPGSIIFNKKTVFDLILPKIAAGEIITKEYLISLGHGGLL
>NZ_CP054692.1|WP_024753176.1|2628909_2629386_-|cyclic-pyranopterin-monophosphate-synthase-MoaC
MNTLTHFDERGNARMVDISNKSVTKRKAVACGKITMNNNVFEKIKNKEIEKGDVLTVAQVAGIMAAKKTSDLIPMTHPINTEKLALSFELDETEHSVIAVCEAEIYAKTGIEIEVITGVSIALITIYDMVKALDRSMVISDIKLVHKSGGKSGEYNRT
>NZ_CP054692.1|WP_024753177.1|2627960_2628929_-|GTP-3',8-cyclase-MoaA
MSIIELKDSFNRKIDYIRVSLTKNCNLRCKYCMPECGVYKESLLKIKDYEKVLLALSEVGIKKIKITGGEPLVRKDTMDLVKSLKESKKFTKITLTTNGLLIDKYIDEIINYMDGVNISIDSLNDSMYKYITGGELQNLKENIRLLLKRGYKNIKLNTVLIRGFNDKEILNLITFAEDNNLILRFIELMPMGNGKAYNKFSREEIDCVVSKVYKNKKRYNGKLGNGPAEYFTYDNLKIKIGFIDALGHSFCKNCNRIRLDSDGKIVFCLCYDTGFSTLDYIDGSITKDEFLKRVTQEILLKPMENIFNKKSESSYSMNELGG
>NZ_CP054692.1|WP_002699340.1|2627519_2627960_-|molybdenum-cofactor-biosynthesis-protein-MoaC
MGTLISINISPKRQTVKKEVTEANLIENFGIENDAHGGNWHRQVSLLSYESFLQFKDTIKIPMEHGIFGENLLISGIDFSKIKIGDRIIISNAELEVTQIGKDCHKGCEIKDIVGRCIMPEEGVFSKVIQGGAIKKGDAVCLKSIL
>NZ_CP054692.1|WP_024753178.1|2627037_2627541_-|MogA/MoaB-family-molybdenum-cofactor-biosynthesis-protein
MFKVHIITVSDSSYYENKKDLTGPALRDFLTEHSFEVCGYDIVPDEINPISNLLIEISDSQKVNLVITNGGTGFNKRDVTPEATLKIADKIVPGFGEEMRRRSLEITPFGILSRAVSVIRNHTLILNVPGSPKAAVENLGFIITAIPHALKILTNEKNDCAKVDDSR
>NZ_CP054692.1|WP_002699342.1|2626705_2627041_-|LysR-family-transcriptional-regulator
MKNKFNHYIKITLVNENKFFGPGVYDLLTLIKKEGAIKTAAQKMGLSYSKALKMIGNMEKELGSKIVDRKSGGITGGESTLTEYAEQFLENYKKFEEEVKSYSEKIFNKYF
>NZ_CP054692.1|WP_024753170.1|2638305_2639988_-|selenate-reductase
MSDTMYGVGFKNILKHIFTEYEKKQTIYNVKGIFKKNNDKVLKIFGSDLESPLGVAAGPHTQLAHNIAADYVGGARFIELKTVQYLYGEELGIQRPCIRADDEAYNIEWSSEFRADIARDEYVRAWFVCKVLAKELDLGSPEGFIFNMSVGYNLEGIKHPLIDEFIETLKDARNTKVYKQCKEDLIELLPMFKKVDREFIESISPNICNSLTLSTMHGTPPEEIEKIVKYILTEKKLHTYIKCNPTLLGYEYVRKVLDEMGYDYIQFGRHQFDIDLQFDDAVVMIKNLQNLAKNLNLEFGVKLTNTFQVAINNRELPGSDMYMSGKALYPLSIATAAKLSKAFDGKLPISFSGGADKNNIKELFDAGIFPVTVCTVLLKPAGLDNLKQLADKLEEVEYKKNKITDTEKIEALRKDSLKNKNYIKSEKERKKYDLHKSFEGIKDDSYECRVLCKNCIRVCPNRANEELVLDDKKIIIHIDSVCNECGNCQFCCIEPARPYKDRITIFNTLDDFHNSENPGFYKKQGEFYYRLNGDEGVGELPKELKNIYSKIAEDMPYYIE
>NZ_CP054692.1|WP_024753169.1|2640009_2641212_-|diaminopropionate-ammonia-lyase
MEKILLASMRKDPRDVDIRFINDTVAKRVINFHKSFPQYEKTPLVELAHLSNYLGIKNIFVKDESYRFGLNAFKVLGGSFAIGSYIADRLGMSVEDLPYERMISKEIKEKLGEITFATATDGNHGRGVAWTANQLKQKSKVFMPKGTARERLDNIRAENADADIYEYNYDECVRLADEYAKTHNGILVQDTSWEGYEDIPRYIMQGYMTMAYEAYNELKEKGSLPTHIFLQAGVGSLASAVTGFFANVMKDAIPTIVIVEPHKAACLYQTAKADDGKLHPVTGDMDSIMAGLNCGEPVTVGWPILKKYAHSFLSVDDCFAAHGMRLLGNPLKNDKKIISGESGAVTAGVVSKLMTDDSLKNIKEKIGLDSSSIVLCFSTEGDTDKDNYLKTVWDGKDSSL
>NZ_CP054692.1|WP_002699321.1|2641319_2642642_-|YgeY-family-selenium-metabolism-linked-hydrolase
MANMDFEKIKAKAAEYHEDMIKFLRDLVQLKGESCEEGEKAKRIQQEMDKVGFDKTWIDKQGNVLGEMGTGKTIIAFDGHIDTVGIGNRDNWKFDPYEGYEDEHTIGGRGTSDQLGGPVASVYAAKIMKDLGLLNDKFKVLVTGTVQEEDCDGNCWLYMIEQEGIKPEFVVSTEPTDGGIYRGQRGRMEIRVEVSGVSCHGSAPERGDNAIYKMAEILKEVEALNENPADDSVEIKGLVKMLDKKYNPEYEEANFLGRGTVTTSEIFFTSPSRCAVADSCAISLDRRMTAGETWESCIKEIEDLPACKKHNAKVTMYKYARPSWKGLSYEQECYFPTWVIPKDHKVTVALEKAYKALYGDKRISPPIKKEEEKRFSRPLVDKWTFSTNGVAIMGRHKIPTIGFGPGAEDQAHAPNEITFKQDLITCAAVYAALPTMYIEG
>NZ_CP054692.1|WP_002699320.1|2642660_2643854_-|knotted-carbamoyltransferase-YgeW
MDFKELIGSLDKLDFKGLYNENFFLTWDKTDDELKAVFAVADAIRKLRENNKSAKIFDSGLGISIFRDNSTRTRFSFASACNLLGLEVQDLDEKKSQIAHGETLLETANMVSFMADVIGIRDDMYIGKGHTYQKEFADSVKLGYEEGILEQKPTVISLQCDIDHPTQMMADTLHFAHYFNGFENLKGKKIALTWAYSPSYGKPLSVPQGGIGLWTRLGMDVVLAHPEGYNVMEDVVGVAKNNVKKYGGSFTISNSMEEAFKDADIVYPKSWAPFAAMEERTELYGRGDFDGIDKLEQRLLKQNATHKDWTVTEELMKLTKNGNALYGHPLPADITGVSCEAGEVDKKVFDKYRKELYTEASFKPYIIAAMIFLQKIQNPKAKLEELWNKDTARINDK
>NZ_CP054692.1|WP_024753168.1|2643883_2644549_-|PAS-domain-containing-protein
MERDEKERILEQYISIAQFISVVAGPNCEVVLRDYHKGYSKIIFMVNGRLSNRKVGDEITGYTLEKIMRSDYRKHDCVLNYIIINESNQRVFRASTYYIKQGGELIGLLCVNYDLTKYLEFRDFYTNEVLYGLEENLAGSKDYFDESMDSILEGIIRNVFVHWDRNIPVKNIESEGNPIRELYKLNVFKYKGSVNKVAELLDISAQTIYRYLGEIEKSIQE
>NZ_CP054692.1|WP_174897227.1|2644677_2646087_-|dihydropyrimidinase
MNILIKNGTIVTDSEVKKADVFIEGEVIAGIGDFAHKEKTCEAVYDAAGLYVMPGLIDPHTHMELKQSETYTSVDDFYTGTIAAACGGTTMIIDHIAFGPQGCNLHYSLNNYKELGKKSVVDYSFHGVIQHVDDSILEELYDIVKNEGIASFKAYSTYGYAMNEVDFYKIIEVMKKAGGLLTIHCENDKITNYLRNKFVSENKISPIYHAYSRPNEAEAESVDELLNLAKLIGDGPIYIVHTSAHESVERIRLGRALGQKNLYAETCTQYLTLTEEKYFEDGDEEGMKYLMAPPLRKKADRESLWNALEDKTLQVVATDHCPFNLKRDKLPHIKNFTASPGGAPGVEERPMVVFSEGVMKGRMSLNRFVEVMSTNAAKIFGMYPKKGALKVGSDADITIIDPNRKKNISVKTQHSVCDYNTYEGFESKCSIAMVFLRGKLVAQYGKFLGKKGDGAFVFRKREQAYAAVR
>NZ_CP054692.1|WP_002699314.1|2646283_2647630_-|glutamate-mutase-L
MKYLLVDLGSTYTKLHIVDTEKNAVTAAASAYTTVETDVAVGFNVAFQKLKDAGAADYDRILGCSSASGGLKIVVIGFSKSLTTEAARLASLSAGGRILKIYSYELSDEDVAEIEKSGADIIVLSGGTENGNKQNIIVNAEKLSAANLQNATLLVAGNTAANPKIKAIFEQSPIVPVFTENVMPATNVVNYKPLRETIGNIFINTIAFAKGIHELSKNFEILLPTPVAVQKAVAAVKKVKGAEVMAVDIGGATTDVHSVAKSFHGEENILSPLFEDPYEKRTVEGDMGMRYSACALYESVGEEAFRKFGIENAKEKTDFRFRNTAYIPETFDEYEFDQIMAHIAAKEALKRHVGTVKKVPTSTRTMFQQNGKDLRFVKYFIGTGGVLIHSKAPERILCAIHQMEENYLAPKNCTFLLDKSYLLASAGLIATVDEQAACKLLEKYLEKV
>NZ_CP054692.1|WP_002699312.1|2647629_2648253_-|cyclodeaminase/cyclohydrolase-family-protein
MLKDLTVVEFVNETASNSPAPGGGSIAALNASVAAGLLTMVANLTVGKKKYLDVSERMEEIAKVCGKYKDTFVDGIDKDANSFNGVMDAMKLPKETESEQKVRSAKIQEGYKEAIAVPLSLGTEVTALYPYAKELAETGNANAITDVAVALINIKAAVEGAFLNVRINLNSLKDEAYKAELNKKMDEVQALVKKNDAEIMEIVKTKL
>NZ_CP054692.1|WP_024753166.1|2648647_2650324_-|formate--tetrahydrofolate-ligase
MEFKTDIQIAEEAKLEPIADVAAKIGISSDELENYGKYKAKISWEALDRLESKKDGKLILVTAISPTPAGEGKSTVSIGLTQGFNKIGKKSAVALREPSLGPVFGVKGGAAGGGYAQVVPMEDINLHFTGDIHAITAANNLISAMIDNHIHQGNALNIDTREVVWKRVLDMNDRSLRNIVISLGAKADGVPREDHFMITVASEIMAVLCLSKTLTDLKERVGKIIVAYAKDGSAVKVSDLKAEGAVAMLLKDALKPNIVQTLENTPAFIHGGPFANIAHGCNSILATKLALKTSDYAITEAGFGADLGAEKFMDIKCRMSGLSPDAIVIVATIKALKMHGGVPKTELKAENIAALEKGFANLKRHVENVHKFGVPAIVAINKFANDSDAEIAKLKELCKQLNVRISLCECWEKGGAGAEDLAQQLVELIDEGKKDFKYLYDVNDSIETKVNTIVKEIYRGKGAVFTKAAKGQVKKLEALGLDKMPICVAKTQFSFTDDASVMGAPEDFTIEITDVRVSNGAGFIVVQTSNIMVMPGLPKIPAAENMDIDNNGRVSGLF
>NZ_CP054692.1|WP_002699307.1|2650325_2651219_-|glutamate-formimidoyltransferase
MKRVMCIPNYSEGRDLEKIEKIVECFRAKENVRLIDYQPDADHNRVVVEVIGEPSAVVKAVIESVKVAAQVIDMSTHQGAHPRMGAVDVIPFIPVTETTTAECVEYAKEVGKAIGDMGIPVYLYEDAATKPERTNLASIRKGQYEGFFDKIKDSEWKPDFGPAEMNAKSGVTAVGARFHLVAFNVNLNTPNLEVADKIAKKVRFIGGGLRFVKAIGLELKEKNQVQVSMNLVNFEKTAIYQALEMVKSEARRYGVSVANTELIGLLPLQALIDSAAYYMQIEDLKAEQVLETLLIGE

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Crispr_ID: NZ_CP054692_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_19

2966539-2966808

Orphan

Consensus_repeat	Method
CGAGTTTTAAAGCTTTGCAAATAGTTTTGCTCTAAAACATCGTTGCTG	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP054692_19

>merge|NZ_CP054692|19|2966539-2966808|PILER-CR
CGAGTTTTGAAGCTTTGCAAATAGTTTTGCTCTAAAACATCGTTGCTGTTTGGAACCACGGGCGTCCGTGCCCGTTCTGAGTTTTGCCGTCCGTGGCAAAACCAAACCTTGCGAGTTTTAAAGCTTTGCAAATAGTTTTGCTCTAAAACATCGTTGCTGTTTGGAACCACGGGCGTCCGTGCCCGTTCTGAGTTTTGCCGTCCTTGGCAAAACCAAACCTTGCGAGTTTTAAAGCTTTGCAAATAGTTTTGCTTTAAAACATCGTTGCTG

>NZ_CP054692|19|1|2966539-2966808|PILER-CR
CGAGTTTTGAAGCTTTGCAAATAGTTTTGCTCTAAAACATCGTTGCTG	TTTGGAACCACGGGCGTCCGTGCCCGTTCTGAGTTTTGCCGTCCGTGGCAAAACCAAACCTTG
CGAGTTTTAAAGCTTTGCAAATAGTTTTGCTCTAAAACATCGTTGCTG	TTTGGAACCACGGGCGTCCGTGCCCGTTCTGAGTTTTGCCGTCCTTGGCAAAACCAAACCTTG
CGAGTTTTAAAGCTTTGCAAATAGTTTTGCTTTAAAACATCGTTGCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_002700662.1\|2971079_2971697_-\|MptD-family-putative-ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|370580
NZ_CP054692.1\|WP_002700654.1\|2967095_2967314_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752761.1\|2960974_2961589_+\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099
NZ_CP054692.1\|WP_002700644.1\|2961598_2962000_+\|diguanylate-cyclase	unknown	unknown	gnl\|CDD\|131417
NZ_CP054692.1\|WP_024752752.1\|2973650_2975711_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|224446
NZ_CP054692.1\|WP_024752763.1\|2956129_2956411_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372498
NZ_CP054692.1\|WP_024752755.1\|2969824_2970523_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	unknown	unknown	gnl\|CDD\|223692
NZ_CP054692.1\|WP_039915723.1\|2976173_2977007_+\|FAD-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|366378
NZ_CP054692.1\|WP_002700663.1\|2972412_2973576_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|223476
NZ_CP054692.1\|WP_052335732.1\|2968223_2969831_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP054692.1\|WP_002700666.1\|2975700_2976168_+\|xanthine-dehydrogenase-subunit-E	unknown	unknown	gnl\|CDD\|224991
NZ_CP054692.1\|WP_024752765.1\|2954638_2955397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_052335653.1\|2956609_2957863_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|379256
NZ_CP054692.1\|WP_024752759.1\|2964604_2966386_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752767.1\|2952751_2953666_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_148884212.1\|2962735_2964586_-\|RNB-domain-containing-ribonuclease	unknown	unknown	gnl\|CDD\|223631
NZ_CP054692.1\|WP_148889758.1\|2967351_2968101_-\|leucine-rich-repeat-protein	unknown	unknown	gnl\|CDD\|372554
NZ_CP054692.1\|WP_002700640.1\|2959961_2960954_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
NZ_CP054692.1\|WP_002700661.1\|2970519_2971074_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_CP054692.1\|WP_174897258.1\|2955477_2955963_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_024752761.1\|2960974_2961589_+\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	1.41833e-86
NZ_CP054692.1\|WP_002700644.1\|2961598_2962000_+\|diguanylate-cyclase	gnl\|CDD\|131417	TIGR02364, dha_pts, dihydroxyacetone kinase, phosphotransfer subunit. In E. coli and many other bacteria, unlike the yeasts and a few bacteria such as Citrobacter freundii, the dihydroxyacetone kinase (also called glycerone kinase) transfers a phosphate from a phosphoprotein rather than from ATP and contains multiple subunits. This protein, which resembles proteins of PTS transport systems, is found with its gene adjacent to.	8.32044e-34
NZ_CP054692.1\|WP_024752752.1\|2973650_2975711_+\|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit	gnl\|CDD\|224446	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion].	3.15386e-40
NZ_CP054692.1\|WP_024752763.1\|2956129_2956411_-\|hypothetical-protein	gnl\|CDD\|372498	pfam13146, TRL, TRL-like protein family. This family includes the TRL protein that is found in a locus that includes several tRNAs. The function of this protein is not known. The proteins in this family usually have a lipoprotein attachment site at their N-terminus.	7.0915e-08
NZ_CP054692.1\|WP_039915723.1\|2976173_2977007_+\|FAD-binding-domain-containing-protein	gnl\|CDD\|366378	pfam00941, FAD_binding_5, FAD binding domain in molybdopterin dehydrogenase.	7.53004e-34
NZ_CP054692.1\|WP_002700663.1\|2972412_2973576_+\|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein	gnl\|CDD\|223476	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane].	6.66971e-144
NZ_CP054692.1\|WP_052335732.1\|2968223_2969831_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	2.36425e-87
NZ_CP054692.1\|WP_002700666.1\|2975700_2976168_+\|xanthine-dehydrogenase-subunit-E	gnl\|CDD\|224991	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion].	2.17485e-46
NZ_CP054692.1\|WP_002700662.1\|2971079_2971697_-\|MptD-family-putative-ECF-transporter-S-component	gnl\|CDD\|370580	pfam09605, Trep_Strep, Hypothetical bacterial integral membrane protein (Trep_Strep). This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. It is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.	4.94323e-48
NZ_CP054692.1\|WP_052335653.1\|2956609_2957863_+\|ISNCY-family-transposase	gnl\|CDD\|379256	pfam13551, HTH_29, Winged helix-turn helix. This helix-turn-helix domain is often found in transferases and is likely to be DNA-binding.	2.57058e-09
NZ_CP054692.1\|WP_024752755.1\|2969824_2970523_-\|energy-coupling-factor-transporter-transmembrane-protein-EcfT	gnl\|CDD\|223692	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism].	3.38388e-15
NZ_CP054692.1\|WP_148884212.1\|2962735_2964586_-\|RNB-domain-containing-ribonuclease	gnl\|CDD\|223631	COG0557, VacB, Exoribonuclease R [Transcription].	2.21348e-60
NZ_CP054692.1\|WP_148889758.1\|2967351_2968101_-\|leucine-rich-repeat-protein	gnl\|CDD\|372554	pfam13306, LRR_5, Leucine rich repeats (6 copies). This family includes a number of leucine rich repeats. This family contains a large number of BSPA-like surface antigens from Trichomonas vaginalis.	9.15763e-22
NZ_CP054692.1\|WP_002700640.1\|2959961_2960954_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NZ_CP054692.1\|WP_002700661.1\|2970519_2971074_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	6.75385e-23

>NZ_CP054692.1|WP_024752759.1|2964604_2966386_-|hypothetical-protein
MKKKLVCFFVAVFAMILLYGASPKDEAHKRLYQKEIDEALQNEVPADSIGDWYEALQTTMCMLIRRTELYRGDMRCIISNAPQARCAVYPDGTIVFTTGLLDYADTVLFQAVMSTPRLARNFNSERERFIAPILADALARFAFHFERPSVYAVHAPAVQEYSDRLTQALLQLAGYSPSLFVTWLERLQDIQTDSYNAEFFSSFYEQQNIPDRLTALHTSSVFFLAEDLSDILFALQTNIGTADAVQTIQGLVKRFPHNIYFERLQALALHKAWLNSLSVKDLELAHFLPLACNDAKTLRSLYENLAAAGKNAQMKFKTTTRKAVAGSRGYYDAAVNAYQTYLADMPEYGMQSAYARLLFESSEKAALALRLAKNAAGFEKDSDSLTARANFATMLYYSGTSYTEALAIMQKLNAQSGSTNSREQMEVSMPKETDMRLISYNYAQMLLGLGETVKAEKIREEMKAMLYPKTQGQPFVLRNIKLKDNTDKLLEHWGKPSSIIYNFAVERWVYANLNVQVYLSTYDSVEQIFGIAVERESPVSLPGDVRTGDTRASFEAFYGKPVYHCADKDVYFFNGNTLAVLYCENIIQTVTLE
>NZ_CP054692.1|WP_148884212.1|2962735_2964586_-|RNB-domain-containing-ribonuclease
MKKGNPVLYKNRPALIIDEQADKFEIETENGTKRVREKDMNLLHAGTVNSLKELLSAPLPSGNIEDALEFFEVESESFFEFAELVWGEYPASAAWAVWDATLSNPLFVCTAPNEPVKIRSKEELEALTKKQNEKNAAEELKRQFVLALKKALQGKEIAVFDCETYAPFLQEIEALALGKTEQSKYLKEAKIAETPESAHTVLLKTGFWTAQKNPYPARFDHSLYSSKIDIPPLKRAENITDLSGIPAFAIDNEGSTDPDDAISFDGKYLWIHVANPADTIEPDTKSDIDARGRGATLYAPEGASRMLGEKAIEYFALGLTPFSCALSFKIGINNEGEIISVSIERTKIAVTRMTYRQAEEKKDDAALKPLFEIARRNTERRHAAGAVSIEMPEVYISVDKDKTVHIQEAQKFESMDMVREMMLLAGEAAARFAFKNAIPFQYISQPFPELPKKLPEGLAGEYKKRRAMKPRNVGTIPSIHAALGIALYSQVTSPLRRYGDLVCHQQLLRFIDGKPLMPADDLVLRIGAADAATRNAILAERCSKKHWTLVYLLDNPDKIFRAIVLETVGNKAHIIIPALAYEADITVKEPLELNAEISVKAAKIFLPKLEAHFIHV
>NZ_CP054692.1|WP_002700644.1|2961598_2962000_+|diguanylate-cyclase
MVGIVVVSHSKNLADEIITLAREMKQNDFPLLNGSGIDGEHFGSDPMIIKETIEKAYLDGGVIIFVDLGSSILNTEMAIDFIDEAAFDTSKIKIADAPIVEGLIAAVPINDEKATAEDILTEMEDFKNFSKVK
>NZ_CP054692.1|WP_024752761.1|2960974_2961589_+|dihydroxyacetone-kinase-subunit-L
MKPYEILSKVIDVIAENKEYLTELDRAIGDSDHGVNLDRGFQKIKSELTAYENMNLAEMANKIAMTLISNVGGASGALYGTAFMKAGMFLKTQTEINDVVIAEALNQMIAGIKSRGKAERGEKTMLDTLIPVYEFVKAAADKGDSLLDTADEIAEIAKKSMEATKDIKATKGRASYLGERSIGHIDPGAYSSYLIIKTICENIR
>NZ_CP054692.1|WP_002700640.1|2959961_2960954_+|dihydroxyacetone-kinase-subunit-DhaK
MKKLINAPENILQEMVGGLVKAHGDLVKNIADLPVIVRKNKADKVCLVSGGGSGHEPSHAGFVGEGMLDAAVAGEIFTSPSADKVYEAIKAVDSGKGVLLIIKNYSGDVMNFEMAAEMAEMEGIKVAKVIVNDDIAVENSTYTVGRRGIAGTVLVHKILGAAAEKGYSLEELVALGNKLIPNIKTMGMALKPATLLSTGKLSFDISDDEVEIGLGIHGEPGTHKEKINTADYFAELLLTKILDEHTLSANSEVAVLVNGLGDTTLIELYILNNKIQQMLAAKNIQVVDTLVGNYMTSLDMGGFSITLLKLDQETKDFLKAKANTIAFKRF
>NZ_CP054692.1|WP_052335653.1|2956609_2957863_+|ISNCY-family-transposase
MKLFMSIDQITRGHVIANCLEGRCTVQQAALRLNLSRRRVQQLKKAFKEKGLAAMLHGNSQRPSAKKTSKEIEQRLLALRSDPALSKSNFLHFHEIVTEEYQLQLSYSTLRRILLSHGIYSPKKRRTRKKVHKTRNRRACFGELLQVDATPFPWFGGKEKSALHAFIDDARGMITGLYLCKNECLLGYLEVLRQTLENYGLPAALYPDKCSVFFVNAKKQLSIEEQLQGTKEQVTQFGKIIKYLGIDMFPAHSSQAKGRVERLWQTLQSRLPVEFARRGITTIEQANQFLKEYIGIFNKQFGVPACDSYSMFVPTPKTLDLDKLLSSVITRKLSSGSTISIKNHLFKIEQNKFGAGTTVNVLISQKHGIRALIHDEFYPIVPLDDIYRTDTVGRTGDLPQVVIDLIYEFLLKDAKAG
>NZ_CP054692.1|WP_024752763.1|2956129_2956411_-|hypothetical-protein
MKKIFPILIVVGLILASCSTTAPIAGATGKVGPKTGEAKQKWLFWLPLKGEGGIQAAANNGGIKTVGTVDVRIDWPASPVIPYHVVTTVVTGE
>NZ_CP054692.1|WP_174897258.1|2955477_2955963_-|hypothetical-protein
MICSCVSSSSTIFKNSDKVLVMTFDGNALKYYLRPEIMLGKDKNSSVNIDFSYQKRNDAYISDSYTNFTLNYNTSAYIQSAQFNIPGKEPVVCNNITTLNRNVSQKFIRVQTIVLQKDMETLMNSFEIPEFNLSIELTDGTVLFFTPSKTLIETIREEKMR
>NZ_CP054692.1|WP_024752765.1|2954638_2955397_+|hypothetical-protein
MAEGKEHDKHIAQIFKKSFLSGKSEKLSAIQDAVYLLMDLTMRDKNSKRANRATRRLREWNIADINGEDIAAFESSASTHQYYAHLGWNYDYTVDGLHEQEKTAEWQSWTRAQCEEFKTHLQNCQRRFMLGKSILCKTLQVIFPHLPPSRINALARLCYYTHIYGDLRWNSRLDYLIDMPQFRSGLIAAVADFYDGTGKERQGIEITARIKQELPDGLVFTIPAAGDDAPLEEWKHCIPLNKAMDTVWGLEI
>NZ_CP054692.1|WP_024752767.1|2952751_2953666_-|hypothetical-protein
MNLKKLISAVIITGLVFVGCKFSNDVGASKENAQDATQWANLTTDRPEVARQLDTVGVEHNKMLDEMYAALVSFKASGARSASSESGLSDDEISFVLNQYLCKNVSRSVSEDVSVPIELSSGEALEAAFSPVVQKSVEQIKALTEALTEASSKSEVVAVLQGIETIEKEAEKDLSAEEKEPFYAYTATARASLAYWYDNLSKWDALRGNNAQRSAKGVEMLKKISFCIASDAGGAYEGWVKTSELIEKYIPFANNKLKLALQIIGSTATAGCSSAEGWKQGKYVIAFPHELVLQKINKKIQQKN
>NZ_CP054692.1|WP_002700654.1|2967095_2967314_-|hypothetical-protein
MKTMMKKAAVIAMTVFLLLAICTSCNSSREPDTVILTVKTNRNVKEIAEIKLNVKKVVTNLILGNWSLQAKL
>NZ_CP054692.1|WP_148889758.1|2967351_2968101_-|leucine-rich-repeat-protein
MKTIKTMIKKAAVIAMTVFLLLGGSFGFAQKSSTDGNFETDGKGLITGYKGTPPVKLVIPDKIGKEKIIGIGKNAFRGAESIQELKLPKTLVLIDNYAFILCRNIKSLDLSRCGKLEKIGDGAFSDCNGIGMLALPANLAEMGEEVFAYCESIPDINLSKCTELKTIAIRAFFGCTNAIITLPKSIEAIGEDAFGNEMYMDSSNNAEDSESNSEGKVYNYTCKEVRVPKAKVSLVTEEPCNFGGKVTPY
>NZ_CP054692.1|WP_052335732.1|2968223_2969831_-|ABC-transporter-ATP-binding-protein
MVEKDKAEKIVEIRNVSFQYENGVQDAAVINNVSLQVERGECILLTGISGCGKTTILRLMNGLIPHYHAGSFSGEIKICGENVSDKPIYEISKKASTVLQNPKSQFFNLDTTSEIVFFLENMGTPFEKMHERLTEVSNFLGIKHLLDRSIFQLSGGEKQMIAIASALASDTDILLFDEPTSNLDVSYIEKIAAVLKRLKEAGKTLIISEHRLYFLKDVIDRALIIKDGKIAQTFSANEFSSLTEDERKQLLLRPINFESNVFCKPKNHKTETFENGSDEGSEKNLNDKNTELCTELYIKNLRYRFPKEKINTIEIENLKLEFGKVIALAGKSGQGKTTFAHCLAGLTKGNKDAVFFSDKTCTSKTSESKKLSSKKLSAKKRLTFSYIVMQDVGYQLFTESVADELELGKNKTDSSIDIEQILSALCLTELKDRHPLSLSGGQKQRVSIGAAVSSGARILIFDEPTSGMDYFHMKETAELINSIRSPEKLILIISHDFEFLSLVADELLLMEDGKIISQNPFTESEAEKTFEYLKA
>NZ_CP054692.1|WP_024752755.1|2969824_2970523_-|energy-coupling-factor-transporter-transmembrane-protein-EcfT
MKKIVLDPRTKLFLTFCMGLSITVMVPLYVEVLNMLLLAFLFFTNGQVKSAIKLMLFFLILVCLSFLPVTNGFVSNVIFQITFMIRRFMLPIVAGKYLIDSTPVGLLMSALEKLKLPQSLVITISVMLRFFPTLSEEYTHIKNAMKMRGIGLNASHVIQKPLLMLEYVMVPLLASASRIGDELAASAHIKGVDAGCEKVRYKSAKFSSADVFISMYIVAGFVLVIGTRVGLW
>NZ_CP054692.1|WP_002700661.1|2970519_2971074_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MQKNHLPLLGVGPLYVISIILITAAGGLFTCLGIIAGGKIPLIVPCVIAGICFIGIGIALWIAAVFFSKIDANIIANKLVTDGVYRIVRNPIYSAFLFVCTGVLLLFCNWYLLLLPPIFFLYLTLLMKYTEEKWLLQQYGEEYQDYCKRVNRCIPSVRGLLHGGNKGFGNKNAGNTGNPMEEHK
>NZ_CP054692.1|WP_002700662.1|2971079_2971697_-|MptD-family-putative-ECF-transporter-S-component
MEETNLQNNKPVEKTGLVLKDFVNIGIFTVIYFVALFIVGTPLGILVVTYLAYPFTASLVLGILGMFLLAKIQKPFGLFIFAALPGVLTTVLGHTPVVAIHSLIVAAIAELVRKFLGYKTIKGSIAGYAIMSLWFVGPFWQIFILKDQYYALTEKMMGTEYAIQLTSLPIWVIPMLYVTSCIGGILGGLLGAKVLKKHFQKAGLV
>NZ_CP054692.1|WP_002700663.1|2972412_2973576_+|DegT/DnrJ/EryC1/StrS-aminotransferase-family-protein
MKNRTVPFFKPSFTTEEEEAVCRVLRSGWLTTAKEALDFEKEFADFVGAKHALAVNSATSGLLLSMHAAGITAGTKILTSPYTFISTATTALHLGGGIVYADIEPDSYNISPEQIEEKLKRDPQIKAIVPIHIAGNVCNMREINRLAKQYGVAVIEDAAHSFPSKTAQGYAGTLGTLGVFSFYATKTITTGEGGMVCTNDDALAKRISVLRSHGINRTIWDRYTDSKASWVYDVSDLGWKCNLPDILAAIGRVQLRKAESFFQKRKAIAEQFNKAFSQYDFLQTPPDGDGNAWHLYLLRLVPEKISVTREAFAQALQEKGLGISVHFIPHFEFTYIKEQLGVQAKDFPQAAAKYANTITLPFWPDMSDEDIAYVIDTVIQTGKEFAR
>NZ_CP054692.1|WP_024752752.1|2973650_2975711_+|xanthine-dehydrogenase-family-protein-molybdopterin-binding-subunit
MKKFVSDIHFENEYFSLLIRSPIAEGVLLGIDVPELPENCFFYSAKDVPGINKIEVFGSSIPIFAGPELNYKGESIGILVGNNLKTLYDVSKQFVIRAQSTPTEEFEKPIDFFDYPKFAHESRSYNNADGILDSADTIIYSSTVFEPQYHYFAELPIVKACPGNKTLSVYASSQWAAHVKKSVSEALKMPEKNIDFFSQAEGEALDGKIWFPSLMAAQVAVAAWLSGKPVSLGLSLKEYYAFAPKTPKIIIQHKTALSKNNEIEAMRTFILIEAGAYSPLIKIMISQMLAAANADYFIPAYTIEAIAVKSNDGMTDIFNGWGGAYVNNALEKHINEICSQLNVMPDEWRLKNMQHAAVKQYQNAKASAASVFSDLLKTVCQNSDFYRKYNVYNFLNSKREKRDPHAWRGTGIAIGFQYNGVQAIIDEGFTYAVEITLDTNSKIYVKTDTISETMQKILKKDIAKKLSVEENTIVFEEKEASAASLMTASAEIIIIPDLIDKCVKTIQGQRFRKPLPITVQKRYRKPRRAKTKDQAKDESFLSKTPAACAIELEMDPVCQDIQVKGVWLACMPGALYSKRAALTEIHKNIITALSKVNSEIIRKKTGVMQNNSIINAKDIPPIHIYLLESQSKPLGTNMIAEGIIHAAYLSALSQVLINTENHLIIAPSLTSNADNNEPLEETENEN
>NZ_CP054692.1|WP_002700666.1|2975700_2976168_+|xanthine-dehydrogenase-subunit-E
MRINFKLNGTEIQMDANPHERLSDVLRREFNILSVKESYPYGENGSSTIILDGKAVPACMVPIFLAANTEIITLEYFQTQNEYKEIINAFKQAGVSLCGYCNTGKILTIYTLLQQNAYPSEEEIKDALSGIVCRCTCMDDIISAVKRIKPQRKKR
>NZ_CP054692.1|WP_039915723.1|2976173_2977007_+|FAD-binding-domain-containing-protein
MDKTSTIYLPRTMAELQSIIKNISNIHAIGGGTEFLRKQYRKNLYFPERIAVLKNIPELKSISKTERTIDFGAAASLQSIVDLGEKNIPQALYEALIYCANPAIRNLATIGGNIAKLRPQSSTLAVLASLDAKIEIRTAAETLWLPIIRFADPKFTDLRSKNHIITKIRISSEPWDYVFYKRIGGTVISKNSASFIFLVRLQKNIIYEMRLIFSNNKFIKNKEFNNLFIGRTVPISERDITVLIEKCTEFFPENTFQNNYLKNCFFNLIEDCLYKLI

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Crispr_ID: NZ_CP054692_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP054692_20

3053273-3053383

Orphan

Consensus_repeat	Method
GTTCCAAACAGAAACGATGTTTTAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP054692_20

>merge|NZ_CP054692|20|3053273-3053383|CRISPRCasFinder
GTTCCAAACAGAAACGATGTTTTAAAGCAAAGTAATTTGCAAAGCTTTAAAACTTGTGAGTTAGTTTTAGCCACGGACGGCGGTGGTTCCAAGCAGAAACGATGTTTTAAA

>NZ_CP054692|20|19|3053273-3053383|CRISPRCasFinder
GTTCCAAACAGAAACGATGTTTTAAA	GCAAAGTAATTTGCAAAGCTTTAAAACTTGTGAGTTAGTTTTAGCCACGGACGGCGGTG
GTTCCAAGCAGAAACGATGTTTTAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP054692.1\|WP_044635058.1\|3038933_3039491_+\|hemerythrin-domain-containing-protein	unknown	unknown	gnl\|CDD\|226454
NZ_CP054692.1\|WP_002695010.1\|3057644_3059480_+\|PTS-mannitol-transporter-subunit-IICBA	unknown	unknown	gnl\|CDD\|237905
NZ_CP054692.1\|WP_174897262.1\|3056833_3057586_+\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP054692.1\|WP_044635059.1\|3037035_3038877_+\|hydroxylamine-reductase	unknown	unknown	gnl\|CDD\|235391
NZ_CP054692.1\|WP_052335727.1\|3066351_3067539_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP054692.1\|WP_024752706.1\|3068485_3069508_-\|EF-P-lysine-lysyltransferase	unknown	unknown	gnl\|CDD\|225178
NZ_CP054692.1\|WP_044635052.1\|3060285_3061461_+\|RNA-splicing-ligase-RtcB	unknown	unknown	gnl\|CDD\|376465
NZ_CP054692.1\|WP_024752715.1\|3040426_3042694_+\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP054692.1\|WP_024752714.1\|3042863_3044519_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_002694975.1\|3044554_3044812_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897263.1\|3065611_3066334_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_024752707.1\|3061811_3063644_+\|oligoendopeptidase-F	unknown	unknown	gnl\|CDD\|341071
NZ_CP054692.1\|WP_024752713.1\|3045102_3047931_-\|DNA-polymerase-I	unknown	unknown	gnl\|CDD\|235591
NZ_CP054692.1\|WP_052812656.1\|3053542_3054781_-\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
NZ_CP054692.1\|WP_044635060.1\|3036207_3036876_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP054692.1\|WP_156009277.1\|3039718_3039889_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP054692.1\|WP_174897261.1\|3050528_3052982_+\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP054692.1\|WP_002695002.1\|3055490_3056753_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176200
NZ_CP054692.1\|WP_024752712.1\|3048804_3050073_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179486
NZ_CP054692.1\|WP_148884633.1\|3067864_3068425_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP054692.1\|WP_044635058.1\|3038933_3039491_+\|hemerythrin-domain-containing-protein	gnl\|CDD\|226454	COG3945, COG3945, Uncharacterized conserved protein [Function unknown].	4.41722e-38
NZ_CP054692.1\|WP_002695010.1\|3057644_3059480_+\|PTS-mannitol-transporter-subunit-IICBA	gnl\|CDD\|237905	PRK15083, PRK15083, PTS system mannitol-specific transporter subunit IICBA; Provisional.	0
NZ_CP054692.1\|WP_024752707.1\|3061811_3063644_+\|oligoendopeptidase-F	gnl\|CDD\|341071	cd09608, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and includes oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid. This PepF family includes Streptococcus agalactiae PepB, a group B streptococcal oligopeptidase which has been shown to degrade a variety of bioactive peptides as well as the synthetic collagen-like substrate N-(3-[2-furyl]acryloyl)-Leu-Gly- Pro-Ala in vitro.	0
NZ_CP054692.1\|WP_044635059.1\|3037035_3038877_+\|hydroxylamine-reductase	gnl\|CDD\|235391	PRK05290, PRK05290, hybrid cluster protein; Provisional.	0
NZ_CP054692.1\|WP_024752706.1\|3068485_3069508_-\|EF-P-lysine-lysyltransferase	gnl\|CDD\|225178	COG2269, COG2269, Truncated, possibly inactive, lysyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis].	1.22648e-98
NZ_CP054692.1\|WP_044635052.1\|3060285_3061461_+\|RNA-splicing-ligase-RtcB	gnl\|CDD\|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	3.30498e-73
NZ_CP054692.1\|WP_052335727.1\|3066351_3067539_+\|HAMP-domain-containing-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.24757e-44
NZ_CP054692.1\|WP_174897262.1\|3056833_3057586_+\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	1.56777e-68
NZ_CP054692.1\|WP_024752713.1\|3045102_3047931_-\|DNA-polymerase-I	gnl\|CDD\|235591	PRK05755, PRK05755, DNA polymerase I; Provisional.	0
NZ_CP054692.1\|WP_052812656.1\|3053542_3054781_-\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	1.13264e-50
NZ_CP054692.1\|WP_044635060.1\|3036207_3036876_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.40149e-15
NZ_CP054692.1\|WP_024752712.1\|3048804_3050073_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP054692.1\|WP_174897261.1\|3050528_3052982_+\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP054692.1\|WP_002695002.1\|3055490_3056753_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176200	cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	0
NZ_CP054692.1\|WP_024752715.1\|3040426_3042694_+\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	2.13506e-90

>NZ_CP054692.1|WP_174897261.1|3050528_3052982_+|glycogen/starch/alpha-glucan-phosphorylase
MNLTKEELQNSVIRKLKRNFSKDISQASQRELYDALASTIAEQLQTNWMATRKLHAKEKIRQMYYFSAEFLMGRALSNNLINSGLKQIVVDLLNELPFGEYTDIEEEEPDAGLGNGGLGRLAACFLDSLATLDYPGHGYGIRYRYGMFEQRIENGEQVEYPDKWLAFRDPWEVRHAELAVKVYFGGQSVCRQGDDGRLYYSLEGAEEIIATPYDMPIVGYNTKTINTLRLWEASSRDGFDLQLFNNMEYAAAVAKENAAEDISRVLYPNDSGPSGKTLRLKQQYFFSSASLQDILRSFVHKHGNDFSKFPEYTVIQLNDTHPVVAIPELMRLLIDEYYLDWDVAWEIVTKTFAYTNHTILSEALEKWPIEIFQTLLPRVYQIVEEINRRFLTLLREKYQGNWQKQNEMSIIGGGKIRMAWLAIVGSFSVNGVAALHTEILKTKELADWYNLYPEKFNNKTNGVTQRRWLLSANPSLAEFITKHIGTDWILNLSELKKLEPLADNEDALKELIAIKHSNKKRLADYLKKTQSIVISPDSIFDVQIKRLHEYKRQLLNILYVMTEYNKIIENPNYEPFPKTIIFGAKAASGYRRAKMIIKLINTVADRVNNDHRVKGRLQVVFVENYRVSAAEKIFPAADVSEQISTAGKEASGTGNMKFMMNGAITLGTMDGANIEIVEEAGAHNAFIFGLTSEQIAEINQKNHYSPHEYLNKNPALAKAVNQLIDGTYTAPHENTFRELHDSLLYGVEGQRPDVYYVLADFDSYAKAHKDIEEVYRDPIKWARMCMLNIARSGKFSSDRTIEDYVQDIWRLKKIHID
>NZ_CP054692.1|WP_024752712.1|3048804_3050073_+|glucose-1-phosphate-adenylyltransferase
MSKVLSIILGGGKGTRLYPLTKERSKPAVPFGGKHRIVDIPISNCINSGFRNIYLLTQFNSASLHLHIAKAYIFDSFSNGFVEILAAEQTFDHSGWYEGTADAVRKNFTHFKTQKPSHYLILSGDQLYRMNLKDFLQKHEESGSDITIACTPVNRSDASGFGIMQIDKNSRITSFMEKPGATKNIDEWKIPENSKLGSFGEKEYLASMGIYIFNTEAMEGSLANNMTDFGKEIIPMAIQKYKVSAYVHTGYWEDIGTIRSFYEATFDLTEIKPQFDFYDAVMPIYTHNRNLPPSKINAATLDNATCSEGCVITSATIKHSVIGIRSIIESDSILEGVVCMGADYYETEAEKEEKRKKGTPCIGIGSNCRIKKAIIDKNACIGNNVSIGMGEVPPDGDYDYYHIVDRIYVITKNAIIPDGTII
>NZ_CP054692.1|WP_024752713.1|3045102_3047931_-|DNA-polymerase-I
MKDDVVFILDAYGLIYRSYFAFVGKPLTNNTGKNISAVFGFFKSLYTILRDYEPQFFAVAMDSRVPTFRHEMYSEYKATRDKTPEDLHAQIPIIEEILTALGITLVRKDGFEADDVIASIAKCASADNKKAVIISSDKDLMQLIDDKITMLKPNKADAWIAFNADDVKEQWGVPPNQMLDFLSLIGDTADNVPGVKSIGPKTAAKLLDEYGSLDGIYAHTNSLKGAMQKKIIEGKENAYFSKKLIALEDSALEKCVLSDFACPVLDYAAAAKIFLREELPSLARQYAPNADFVKTDEAFLVRSADPKKEKKQGANSAGANPITTSPLQEIASASGGFKKNAGNYRGITEPEELRKLIDAAIAQGFAAFDCETTGLNPLEAELAGFSLALKAEEAFYIPVKLLPAELQSQAPQPMPLEKAVSELARLWQQKNLTIIMHNGKFDYQAMRTAGVFEKTPCAIFDTMIAAWLLDPDRTSFSLDSLASSLLKLQTIAYKDVVPKGKIFSDVPYEQAVAYAAEDADITLQFYEFLLPKLKEYGLFDLFQTLEMPLLPLLAEMEIAGIFLKKEELAEFSEELGKEIIVHEREIFDIVGHEFNIASPKQLQEVLFTELKLPTGKKTKTGYSTDTSVLEVLASEHVIPAKILEYRALTKLKSTYTDALPALADKNGRVHTSFIQTGTATGRLSSRDPNLQNIPIRDEAGRRIRKAFQAEKGKNLISADYAQIELVILAHLSQDKNLVQAFQEGTDVHAATAGLIFGVPIGEVLPDMRRIAKTINFGVMYGMSAFRLSNALRIPRRQAADFIETYFKTYSGVHIFMEELKESARRKGYVETLMGRRRYIYAINSANKLEQAGAERVAINTPIQGSAADIVKTAMLKVQNALQAHKLQAKLLLQVHDELICEAPEKETETVKTLLRQEMESVVKLLVPLRVNIESGKTWGDFH
>NZ_CP054692.1|WP_002694975.1|3044554_3044812_-|hypothetical-protein
MGTPSLFQILKNVLFSPEVLFVTVIIILYLNLVFYVVYYRKTHSKINRRIHKMRMAAKNTKQTAQVEEKEETETEPPKKRAATVR
>NZ_CP054692.1|WP_024752714.1|3042863_3044519_+|hypothetical-protein
MSVIKFSIKNKKLCISMDTGMSSRSFAQSRQKDCFSEKGFILRDARVIPFQFEKTELGIRNGKESVFLTAELSLPELEYEESVNVQTLYANILQHLYEKNTDNLISKSDIQAVQNVLEIFSRILFAKEEISELFLTELAAAGTQSIAFLKETIILLPPITTKNCLMAQPKAEKLDYLSAVHPFAEKVLLKESFGFLIAGTLYYLLCGNSAYGKGIKNENTLSENMLDSFFDPPNTLIQNISQNDSDLLSFFLKVKKNKKEKENLVAFFGRLFSLPERLEKNQENLLQDREAFYLQRERILQQQQKSIQKKRFLRKHRTKLTVGFFAFLTLSLIFASIIYKQNSAPDTKGLTSLQVVEGFYTAVAELNQEISSAYATRNGGGKYESLMMNLYVIKKTREGYEQRKIYFTPQELAVLCDKIKEKQPSASFEEFCHAVKKIMQLGSVYGITDLKITVKEENPSQTVFDVLFFYWLPTPSDAQSKLSAEDPFSPKLEEFGFPVQVYHKHDTVCLQLYKDRWLISSIDSQERLVAEDGKNILKAFFKESEKADYLP
>NZ_CP054692.1|WP_024752715.1|3040426_3042694_+|glycoside-hydrolase-family-2-protein
MSRTIIPLWNNWLFKKDFNNSDIRKDIATDDFTPVGIPHMVQEIPYNYFDERNYQCISCYRREFAVDESMRGSRVFIDFEGVMAAATVYINEKEVGTHKGGYTPFSFDITDYVLYSKSGAADNLLVVEVDSTERADIPPFGFAIDYLTYGGIYREVCLRFVPEVYIKDVFFQPLDSDKLEKKLLANIEFENTGAENKDITYSLVLKDMQDTIIAAVTNSCIAAAGTSFQRAVLTDLQDIQVWDIENPQLYRAELCIVSDTSRDEDIISATVGFRTAEFTPEGFFLNGKQIKIRGLNRHQAYPYVGYAMPKRAQQDDADILKHELGINLVRTSHYPQSKHFLNRCDEIGLLVFEEIPGWQHIGDEAWQDVACKNVEEMILRDRNHASIVLWGVRINESPDSHNFYLRTNEIARRLDPTRQTAGVRCHANSDFLEDVYTMNDFICGSVQPDTLRDRALRPQREITGQADLVPYMVTEFAGHMYPTKRFDQEERLVEHATKHLMVQNTAALNPHICGAIGWCAFDYNTHYNFGSGDRICYHGVMDMFRIPKFAAAVYASQMPPSKKAILEPLTRYTIGERSIGGIAPLMICTNCDSVRVVIGEQDLGLFYPSKERFAGLEHPPIIISQIEGVWGGGWLDAAFIGYVNEKEVAIKRFACNPTAVDLAVHSDHTELSAYEPDTTRITVKLTDRFGNELSFSDAIIKVQLEGPAEIIGPKEFALIGGVRAFWIKTKFESGTVTVNVASEGFKTKQITIQVT
>NZ_CP054692.1|WP_156009277.1|3039718_3039889_-|hypothetical-protein
MVIAENGMRIRNFTTHVCCGEEFSGLNFRESRRSVYCTEESRWKIIGMFWYCVAAL
>NZ_CP054692.1|WP_044635058.1|3038933_3039491_+|hemerythrin-domain-containing-protein
MDSIELMIKEHENILKFISVIRKACCRILEGAPVPVEDFTAMISFARTYADTHHHGKEEEILFHNMIEHIGQPATGLIQHGMLVEHDMGRFFISRLEEALTRYAADPNTENKLDIIMYSAGWADLLTRHIEKENKVAYVFARRELPPEVLHNIDKKVQVFEQEAAHRNVQEKSLQLLKDLTAKYC
>NZ_CP054692.1|WP_044635059.1|3037035_3038877_+|hydroxylamine-reductase
MENKMFCFQCQETAGGKGCTLSGVCGKKPDTAAMQDLLMYVTKGLSVVTTQLRAERKTVAADVNHTVTQNLFITITNANFDNEAIITQIQSTLKLKEALLSQIEKKESLPEAALWNEDVSTFAKKAVDVGVLHTKNEDIRSLRELITYGLKGLSAYSKHANALLHDNDEVDAFIQQALTKTLDDSLTVEDLVALTLETGKYGVEGMALLDKANTSTYGNPEMTKVNIGVGKNPGILISGHDLRDMEMLLKQTEGTGVDVYTHSEMLPAHYYPAFKKYSHFVGNYGNAWWKQKEEFESFNGPILMTTNCIVPPKESYKDRLYTTGAAGYPGCKHIAGDIGEEKDFSPLIEQSKRCSPPTEIESGEIIGGFAHHQVFALADKIVDAVKSGAIKKFIVMGGCDGRAKARNYYTEFAKALPKDTVILTAGCAKYKYNKLDLGDIGGIPRVLDAGQCNDSYSLAIIALKLKEVFGLDDINKLPIIYNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPAFLSPNVAKVLVENFGIAGIGTVEDDMQLFFGNDEAKPAISADMLIGSIVRKFPEAVPVLIAQGMHCLGCPSAQTETLANACLVHGLESESVVKALNKSLH
>NZ_CP054692.1|WP_044635060.1|3036207_3036876_-|Crp/Fnr-family-transcriptional-regulator
MDFFMLSNTILFRGITPEEIKNVLLCLGGKQKHFTKEETVYRAGEQVSALGIVLSGSVIIENNDVWGNKTVLDKLGIGKVFAETYACSEKETLMVDVVATEDTDILFLQTKPLLTLCPQTCAYHTKVIRNLVSLLAQKNLHLSHRMFYVSSKSIRGRLLSYLSHQAAQNSSWEFTIPFNRQELADYLQVDRSALSNEISKMQKEGFFTVNKNQFSITLKEFF
>NZ_CP054692.1|WP_052812656.1|3053542_3054781_-|class-II-aldolase/adducin-family-protein
MKEISAKEINESIRGLQSGNIAVNLQSIFIKTAENAFITVAPHSSEQEITASDLQKLNSKQLQRTNNTVFRIFSHHADISAVIACSPKFCAVAASCYKRIPPVLDDMAQIVGVYAEVVELEDQNRILRLFKKNHALIIKNNADGIGAIAAGRDLAQAAAAALILEKSAQVFIEAQYLGGAKALHWFNAKRMNHGYRTKYSKMNTNVRHLSERDYSRKIAADELELRAKIVEMGKQLVRENLMQGTWGNISVRLNNHQMLVTPSGIDYFSLSPYDIVLVDLESLEHEGSLKPTSEKLIHADLLKKNKDINCIIHTHPLHCGAYIAAHKPLIVTAPEIKSILKGNVAIADYAASGTKKLAENILRAIKENSACFMANHGLVVCGSSLEDALKKCRTIEAYARSELDKLLHTGNA
>NZ_CP054692.1|WP_002695002.1|3055490_3056753_+|zinc-binding-dehydrogenase
MKVKAVRLHGANDLRLDEFELPEITDDEILVKVVSDSVCMSTYKCAILGTEHKRVHPNVADHPAIMGHEMAGDIVKVGKNHQGKFKPGMKFTLQPALNYKGTMWSPGYSYEFFGGNATYCIIPAEVMELGCLLEYKGKAYYEASLAEPMSCSIGAINACYHTKMGVYTHEMGIKENGKLAILAGAGPMGLGAITYLLHRDVRPSMLVVTDIDQERLDRATELFPPAEYMAKGIELHFINTGKMDDPAEELIKITGGTGFDDVLCYAPVEAVIELSSAVLGRDGCLNFFAGPTDNKFTARINFYDVHYNSTHVLGTTGGNTDDMIESLELTAANRINPAVMVTHIGGLDAAADTILNLPNIPGGKKLIYNHLNMPLIALTDLRKKGAEDERYIKLADIVDAHKGLWCLEAEQYLLENFIDE
>NZ_CP054692.1|WP_174897262.1|3056833_3057586_+|DeoR/GlpR-transcriptional-regulator
MEERRNKIITFVNEHGNITFNELKENFPHVSEMTLRTDLKVLDKEQRLVRIHGGARSLDKVVGNDDFLKKRFIQNTKAKKIIAKKALEFIESNTTIFLDSGSTTTMLAHILEDKPNIFVTSGLTCAIEMARLERAKVVLSGGNINRHSLSVNGIEGIRYIEKINFDIAFIGVTRYSKETSFTCESLEDAELKQTVIKKSRKVIVLMDSSKINQRGTYTICNHNEVDIVISDNELPEALKHEFRNRGIAVY
>NZ_CP054692.1|WP_002695010.1|3057644_3059480_+|PTS-mannitol-transporter-subunit-IICBA
MKATLQKFGKQLSAMVMPNIGAFIAWGFITALFIPDGWIPNEQLASIQPYMLAYLLPVLIAATGGKMVAGERGLVMGAIAVVGCIAGAGGVDGKPMLMAAMIVGPFAGWVIKQFDAFMENRMPVGFEMLINNFSIGIIGMLISFIGFYLIGPFMTGVLAVLTAGVNVLLKYSLLPFVAIFIEPAKVLFLNNAINHGMFTPIGVEQAAQTGKSIMYMLETNPGPGLGVLLAYWLFAKDKATKDSAPGAIIIHFFGGIHEIYFPYILMNPFIIIAPILGNLAAISFYLIFGAGLKGPASPGSIIAFLSMAPKGSTVIALLGVVIAAGISFLIASPIVKLTSTKDLEKAKKKVKTLKAQSKGEVDRIKKIVFACDAGMGSSAMGATKFKNRIKASRPDIIVTNTSVDNIPGDSDVVVVQAVLAERAQKSAPQAKLITIENFLADSALDDLFFELSTGDAMVSKNTENKKTETPALKDVITIDGILLNQKAKTKEEAIRAAGKLLHKLDYVEEAYIDSMLEREKIATTYMGMGLAIPHGTTHGTETIKKSGIVVLQYPDGVDFDGELAYFVIGIAGIGGSHMDVLSKVCTALEDESVLEKMRNTNDKEWVLQQLS
>NZ_CP054692.1|WP_044635052.1|3060285_3061461_+|RNA-splicing-ligase-RtcB
MKNYKIFAESIEEEAKRQVEELSRQEFAKNSKIRIMPDVHAGKGCVIGTTMTIEDKICPNLVGVDIGCGISVFELGKIEPINFHKLDKVIRENIPSGSAIRKDERISKELKERLSTLTCANKINLEREYFSCGSLGGGNHFIEVNKDEIGNIYLAIHSGSRHLGTAVANYHQRKAIELLTSQNKAHKELIAKLKSERREKDIAAELVALPKQTHIPNELAFLSGEHTKNYLHDMTITQSFASENRKIIGEIILEKMNLEANDSWESIHNYVDIENKILRKGATPAYKGQKVIIPMNMRDGSLLCIGKGNAEWNFSAPHGAGRLMSRSAARSKLSFDTFKKEMSGVFSTSVSVCTLDEAPMAYKPMESILRQIKDTVHVTAIIKPLYNFKAP
>NZ_CP054692.1|WP_024752707.1|3061811_3063644_+|oligoendopeptidase-F
MKSTTPKRADIAKENQWKLELLFESEQAWQSALQEAIKSGERVLLYKDTFENPAEVESATLLNCLQAFETFEKQSEKLGQYAFLKKSEDEGNSENIARLSQYIMAMTEISAKLSWFVPALMQIPEDKVRAWIDPSGAEGKAFADYKIFIEKTLYLKVHTLSDREEKMLTLLSESGGTAQRSFSVLTNVDLQFGSITDRGEEKELTQSSFSQFLLSPDRAVREKAYKQFYAGFDAHKNTIASLYIGQVQQNTAMAKIRGYGSARENALYPDKVPVSVYDNLIKSVRDNLEPLHRFYALVQKTLKVEELRHYDVYVPLVAEIRKHTEYTEAVDIITEALQPLGGEYVNTIRSGLLGGWVDRYENQGKRSGAFSSGGFESEPYILMNYKPDVIRDVFTLAHEGGHSMHSWYSVRNNPFLCHDYTIFEAEVASTFNEELLFRSMVKKASDPKERAYLLSIRASDILATLYRQTMFAEFEMITHQLVESGTPLTLDRLRAEYKKLLTAYFGPAMHFEEVSDLECLRIPHFYRAFYVYKYATGISASLALAERVLSGGETERNDYFNFLKSGGSRYPIEALKVAGVDMASPEPVRAACNHFGEIVTELEKALKTIL
>NZ_CP054692.1|WP_174897263.1|3065611_3066334_+|hypothetical-protein
MSSKKEYADFPLDPHKKKMLAVNIKTLFRILTFTTLALLIASLGMIFAVRAAKTKLLSAWMQEKNLMAASEELRQSSEDLTRLCRVFAANEARKYEDEYLAILNWRNGKTARPAKAANSLYAGKTISQYDVFKELGCTKDELALLTAATKLSDVLALREAQAMETIKQKKYVSGPAAIFDGERYDDFAVRILHDEEYHNQVTKIMQLIDEFCMLLADRTHAVISATNRMADTYLFLTVVL
>NZ_CP054692.1|WP_052335727.1|3066351_3067539_+|HAMP-domain-containing-protein
MIFFIWFLTTAVIHPILKSSDVFSYLGTGDLRKELEVKSNNEIGRMSGSFNTMLSNIKKLIFSIQKNANNLLNLGEELASNMTETAAAVHQISANIEGVKHQTMTQAASVTETAATIEEIVRIIRQLNKSIENQSASVAESSSSIEQMVMNIQEITKFIGHANETIEGLNTATAEGKESVSVANTISQKITEESGSLLDASSVIQHIASQTNLLAMNAAIEAAHAGDSGKGFAVVADEIRKLAEESNSQGKAITATLKTLSSEIETLANSAKNSEEKFNTIFELSERVQEISNNLISKMQEQEIGSREVLKAIQDINGVTVEVKNGSTEMLLGGESVAQEMQKLDSLTRIISDSMNEMASGAVQIDKAVREVNEITQKNKQSIADLTTEVEKFKV
>NZ_CP054692.1|WP_148884633.1|3067864_3068425_+|hypothetical-protein
MVRASGKKRQDDLDFCFISLWISFNAIYADDLNEIGDRSAVTGFLKKLSDLDTDKLLYALVWDTFFDNIRILLNNQYSFQPFWDEYNKPKTTTANSWEERFESEKKKVTKAMGTQNTAHLLTIVFRRLYTLRNQIIHGGATYNSSTNQSQKKEACRFLLTIIPAIINIIMDNYNEDWGIPYYPVVK
>NZ_CP054692.1|WP_024752706.1|3068485_3069508_-|EF-P-lysine-lysyltransferase
MDIEALEFRALCLQTARDFFIENNYLELDTPALAAALIPETCLEVFQTEAIQPFMPKESAKKLFLVPSPEVFIKPVIAQTKRSVFQISKCYRNGESVGRIHSPEFTMLEYYTMNADYKDSIKITESFFCFIIDKIKNHPLASPEACNFFAEGFQLLTMEDAFIRYAGFSLAEQDSVKKLAEQARRLDLASGTEFAHYGWDDLYELILVHCIEPALPKKRCVALMDYPAEVPCLAKNKAFTIQTAEGKTVTRQVKERWEVYAGGIELANCYTEERDSDTVTRYFAEEAALKEKTALVPHPSVKNFGDICAQMPPCSGVALGMDRLIALLAGRKTIDSFFYA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	5939-5956	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	192731-192748	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	238968-238985	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	401750-401767	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	715389-715406	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	945022-945039	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1266227-1266244	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1441525-1441542	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1518415-1518432	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1697285-1697302	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2760835-2760852	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	3002481-3002498	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	3142679-3142696	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	140564-140581	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	178905-178922	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	994055-994072	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1282833-1282850	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1425088-1425105	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	1909711-1909728	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2093445-2093462	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2159578-2159595	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2493784-2493801	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2654425-2654442	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2673747-2673764	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2870795-2870812	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2897947-2897964	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2943490-2943507	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	2956505-2956522	0	1.0
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	1157327-1157382	0	1.0
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	1157431-1157486	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	787938-787992	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1727992-1728046	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2102780-2102834	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2284065-2284119	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2424900-2424954	0	1.0
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2721025-2721079	0	1.0
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	1157327-1157382	0	1.0
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	1157431-1157486	0	1.0
NZ_CP054692_5	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	NZ_CP054692.1	227329-227346	1	0.944
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	2806054-2806109	1	0.982
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	386311-386366	1	0.982
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	1239962-1240017	1	0.982
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	502746-502800	1	0.982
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1056081-1056135	1	0.982
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2086784-2086838	1	0.982
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2201990-2202044	1	0.982
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	3104694-3104748	1	0.982
NZ_CP054692_14	14.1\|2362078\|44\|NZ_CP054692\|CRISPRCasFinder	2362078-2362121	44	NZ_CP054692.1	2732158-2732201	1	0.977
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	2806054-2806109	1	0.982
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	386311-386366	1	0.982
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	1239962-1240017	1	0.982
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	558378-558433	2	0.964
NZ_CP054692_9	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	NZ_CP054692.1	1284681-1284736	2	0.964
NZ_CP054692_11	11.1\|2212494\|41\|NZ_CP054692\|CRISPRCasFinder	2212494-2212534	41	NZ_CP054692.1	1861897-1861937	2	0.951
NZ_CP054692_11	11.1\|2212494\|41\|NZ_CP054692\|CRISPRCasFinder	2212494-2212534	41	NZ_CP054692.1	2483921-2483961	2	0.951
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	833016-833070	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1103926-1103980	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1263015-1263069	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1314843-1314897	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1405788-1405842	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	1723362-1723416	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2085993-2086047	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2086191-2086245	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2086389-2086443	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2086587-2086641	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	2723975-2724029	2	0.964
NZ_CP054692_12	12.1\|2283460\|55\|NZ_CP054692\|CRISPRCasFinder	2283460-2283514	55	NZ_CP054692.1	3017365-3017419	2	0.964
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	558378-558433	2	0.964
NZ_CP054692_17	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	NZ_CP054692.1	1284681-1284736	2	0.964
NZ_CP054692_19	19.1\|2966587\|63\|NZ_CP054692\|PILER-CR	2966587-2966649	63	NZ_CP054692.1	251021-251083	3	0.952
NZ_CP054692_19	19.2\|2966698\|63\|NZ_CP054692\|PILER-CR	2966698-2966760	63	NZ_CP054692.1	251021-251083	4	0.937

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 5939-5956, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

2. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 192731-192748, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

3. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 238968-238985, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

4. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 401750-401767, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

5. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 715389-715406, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

6. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 945022-945039, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

7. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1266227-1266244, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

8. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1441525-1441542, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

9. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1518415-1518432, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

10. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1697285-1697302, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

11. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2760835-2760852, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

12. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 3002481-3002498, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

13. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 3142679-3142696, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

14. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 140564-140581, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

15. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 178905-178922, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

16. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 994055-994072, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

17. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1282833-1282850, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

18. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1425088-1425105, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

19. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 1909711-1909728, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

20. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2093445-2093462, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

21. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2159578-2159595, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

22. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2493784-2493801, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

23. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2654425-2654442, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

24. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2673747-2673764, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

25. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2870795-2870812, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

26. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2897947-2897964, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

27. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2943490-2943507, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

28. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 2956505-2956522, mismatch: 0, identity: 1.0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

29. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 1157327-1157382, mismatch: 0, identity: 1.0

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
********************************************************

30. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 1157431-1157486, mismatch: 0, identity: 1.0

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
********************************************************

31. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 787938-787992, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

32. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1727992-1728046, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

33. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2102780-2102834, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

34. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2284065-2284119, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

35. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2424900-2424954, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

36. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2721025-2721079, mismatch: 0, identity: 1.0

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	Protospacer
*******************************************************

37. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 1157327-1157382, mismatch: 0, identity: 1.0

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
********************************************************

38. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 1157431-1157486, mismatch: 0, identity: 1.0

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
********************************************************

39. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to position: 227329-227346, mismatch: 1, identity: 0.944

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatcagtgata	Protospacer
*********** ******

40. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 2806054-2806109, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

41. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 386311-386366, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

42. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 1239962-1240017, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

43. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 502746-502800, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

44. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1056081-1056135, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

45. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2086784-2086838, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacacaga	Protospacer
**************************************************.****

46. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2201990-2202044, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

47. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 3104694-3104748, mismatch: 1, identity: 0.982

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccacgcaga	Protospacer
******************************* ***********************

48. spacer 14.1|2362078|44|NZ_CP054692|CRISPRCasFinder matches to position: 2732158-2732201, mismatch: 1, identity: 0.977

cagaaccgccacggatggcggtggttccaagcagacggtttagt	CRISPR spacer
cagaaccgccacggacggcggtggttccaagcagacggtttagt	Protospacer
***************.****************************

49. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 2806054-2806109, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

50. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 386311-386366, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

51. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 1239962-1240017, mismatch: 1, identity: 0.982

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

52. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 558378-558433, mismatch: 2, identity: 0.964

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttgcaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
***************..***************************************

53. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to position: 1284681-1284736, mismatch: 2, identity: 0.964

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttggaattga	Protospacer
****************.*******************************.*******

54. spacer 11.1|2212494|41|NZ_CP054692|CRISPRCasFinder matches to position: 1861897-1861937, mismatch: 2, identity: 0.951

gttctgagttttgccgtccgtggcaaaaccaaaccgtctgc	CRISPR spacer
gttctgagttttgccgtccgtgccaaaaccaaaccatctgc	Protospacer
********************** ************.*****

55. spacer 11.1|2212494|41|NZ_CP054692|CRISPRCasFinder matches to position: 2483921-2483961, mismatch: 2, identity: 0.951

gttctgagttttgccgtccgtggcaaaaccaaaccgtctgc	CRISPR spacer
gttctgtgttttgccgtccatggcaaaaccaaaccgtctgc	Protospacer
****** ************.*********************

56. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 833016-833070, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaagactaaaaatcaggacgtggcggtggttccacgcaga	Protospacer
****************** *************.**********************

57. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1103926-1103980, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

58. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1263015-1263069, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccaagcaga	Protospacer
******************************* ***************** *****

59. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1314843-1314897, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

60. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1405788-1405842, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagtgcgtggcggtggttccaagcaga	Protospacer
******************************* ***************** *****

61. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 1723362-1723416, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cattgatttaatcaagaatactaaaaatcagggcgtggcggtggttccatgcaga	Protospacer
**.**********************************************.*****

62. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2085993-2086047, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

63. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2086191-2086245, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

64. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2086389-2086443, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

65. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2086587-2086641, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

66. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 2723975-2724029, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccaaacaga	Protospacer
************************************************* .****

67. spacer 12.1|2283460|55|NZ_CP054692|CRISPRCasFinder matches to position: 3017365-3017419, mismatch: 2, identity: 0.964

cactgatttaatcaagaatactaaaaatcagggcgtggcggtggttccacgcaga	CRISPR spacer
cactgatttaatcaagaacactaaaaatcagggcgtggcggtggttccaagcaga	Protospacer
******************.****************************** *****

68. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 558378-558433, mismatch: 2, identity: 0.964

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttgcaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
***************..***************************************

69. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to position: 1284681-1284736, mismatch: 2, identity: 0.964

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttggaattga	Protospacer
****************.*******************************.*******

70. spacer 19.1|2966587|63|NZ_CP054692|PILER-CR matches to position: 251021-251083, mismatch: 3, identity: 0.952

tttggaaccacgggcgtccgtgcccgttctgagttttgccgtccgtggcaaaaccaaacc	CRISPR spacer
tttggaaccacgggcgtccgtgcccgttctgagttttgccgtccgtggcaaaaccaaacc	Protospacer
************************************************************

71. spacer 19.2|2966698|63|NZ_CP054692|PILER-CR matches to position: 251021-251083, mismatch: 4, identity: 0.937

tttggaaccacgggcgtccgtgcccgttctgagttttgccgtccttggcaaaaccaaacc	CRISPR spacer
tttggaaccacgggcgtccgtgcccgttctgagttttgccgtccgtggcaaaaccaaacc	Protospacer
******************************************** ***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

143023 : 194423

Bacillus_phage(37.5%)

transposase,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024752864.1\|143023_143494_+\|tRNA	Cys-tRNA(Pro) deacylase	NA	NA	NA	NA
WP_024752865.1\|143684_145046_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	8.9e-18	27.9
WP_024752866.1\|145048_145819_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_024752867.1\|145800_146550_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA
WP_024752868.1\|147316_148444_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_002700578.1\|148430_149153_-	rRNA methylase	NA	NA	NA	NA
WP_002700580.1\|149409_149955_+	anti-sigma factor antagonist	NA	NA	NA	NA
WP_148879331.1\|150076_150358_+	hypothetical protein	NA	NA	NA	NA
WP_024752871.1\|150572_151751_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002700584.1\|151936_152620_-	hypothetical protein	NA	NA	NA	NA
WP_002700590.1\|153197_153794_+	hypothetical protein	NA	NA	NA	NA
WP_002700592.1\|153839_154628_+	RNA polymerase sigma factor WhiG	I1ZBD5	Salisaeta_icosahedral_phage	9.8e-09	30.6
WP_024752872.1\|154638_156606_+	DUF342 domain-containing protein	NA	NA	NA	NA
WP_024752873.1\|156586_156928_+	hypothetical protein	NA	NA	NA	NA
WP_174896899.1\|157037_157526_+	hypothetical protein	NA	NA	NA	NA
WP_174896900.1\|158281_158794_-	hypothetical protein	NA	NA	NA	NA
WP_148889194.1\|158802_159528_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024752874.1\|160156_162355_-	AAA family ATPase	G3MBE0	Bacillus_virus	7.2e-102	46.6
WP_024752875.1\|162347_163355_-	hypothetical protein	NA	NA	NA	NA
WP_024752876.1\|163366_164044_-	hypothetical protein	NA	NA	NA	NA
WP_174896901.1\|164210_165092_+	bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.7e-30	35.5
WP_002700629.1\|165109_165919_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_174896902.1\|167143_168751_-	site-specific DNA-methyltransferase	NA	NA	NA	NA
WP_148879327.1\|168881_169571_-	hypothetical protein	NA	NA	NA	NA
WP_024752881.1\|169581_170280_-	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_024752883.1\|171786_172908_+	hypothetical protein	NA	NA	NA	NA
WP_024752884.1\|172894_173668_+	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_044634710.1\|173688_174231_+	signal peptidase II	NA	NA	NA	NA
WP_024752886.1\|174220_174493_+	hypothetical protein	NA	NA	NA	NA
WP_024752887.1\|174947_176573_-	hypothetical protein	NA	NA	NA	NA
WP_024752888.1\|176983_177817_+	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA
WP_002700602.1\|177930_178155_+	hypothetical protein	NA	NA	NA	NA
WP_024752889.1\|178215_178776_-	hypothetical protein	NA	NA	NA	NA
WP_148889195.1\|179009_180263_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_174896903.1\|180310_181141_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.6e-33	35.8
WP_174896904.1\|181124_181487_-\|transposase	transposase	NA	NA	NA	NA
WP_174896905.1\|181498_181699_-	hypothetical protein	NA	NA	NA	NA
WP_024752894.1\|182349_183174_-	A/G-specific adenine glycosylase	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	3.7e-19	35.9
WP_002696371.1\|183175_183745_-	cytidylate kinase family protein	NA	NA	NA	NA
WP_002696373.1\|183804_184671_-	YicC family protein	NA	NA	NA	NA
WP_002696375.1\|184688_186128_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA
WP_024752895.1\|186934_188923_+	excinuclease ABC subunit B	NA	NA	NA	NA
WP_024752184.1\|189117_189399_+\|transposase	transposase	NA	NA	NA	NA
WP_174896903.1\|190403_191234_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.6e-33	35.8
WP_156009222.1\|191263_191428_-	hypothetical protein	NA	NA	NA	NA
WP_174896906.1\|191992_192643_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_156009222.1\|193398_193563_+	hypothetical protein	NA	NA	NA	NA
WP_174896907.1\|193592_194423_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.0e-32	35.4

DBSCAN-SWA_2

660048 : 727140

uncultured_Caudovirales_phage(61.54%)

integrase,transposase,protease

attL 659923:659982|attR 682391:683695

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
659923:659982	attL	NA	NA	NA	NA
WP_082048250.1\|660048_661212_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_174896957.1\|661406_663527_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.0e-07	37.2
WP_024751685.1\|664040_664874_-	hypothetical protein	NA	NA	NA	NA
WP_174896958.1\|664867_665473_-	hypothetical protein	NA	NA	NA	NA
WP_174896959.1\|665604_666207_-	hypothetical protein	NA	NA	NA	NA
WP_024751688.1\|666191_666773_-	hypothetical protein	NA	NA	NA	NA
WP_174897287.1\|667152_668685_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.1e-07	32.6
WP_174897288.1\|669012_670977_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_024752139.1\|672382_673528_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_174897289.1\|673721_675527_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.5e-07	32.6
WP_174896960.1\|675952_676681_-	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_024752137.1\|677022_677919_-	site-specific DNA-methyltransferase	A0A1D8KJW7	Synechococcus_phage	6.5e-41	44.3
WP_039943402.1\|677911_678778_-	hypothetical protein	NA	NA	NA	NA
WP_174896961.1\|678884_680183_-\|integrase	integron integrase	A0A1P8DJJ6	Virus_Rctr41k	3.7e-61	39.9
WP_174897290.1\|680470_682114_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	2.3e-07	32.6
WP_082048250.1\|682516_683680_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_174896962.1\|683680_684634_+	Fic family protein	NA	NA	NA	NA
682391:683695	attR	NA	NA	NA	NA
WP_024752155.1\|684853_686002_-	Fic family protein	D7RWK9	Brochothrix_phage	5.6e-37	30.9
WP_024752156.1\|686683_690835_+	TIGR02680 family protein	NA	NA	NA	NA
WP_024752157.1\|691057_692944_-	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	6.0e-105	35.6
WP_002699611.1\|693149_693368_-	cation transporter	NA	NA	NA	NA
WP_024752158.1\|693665_694031_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002699602.1\|694187_694358_+	hypothetical protein	NA	NA	NA	NA
WP_024752159.1\|694350_695640_+	DUF2399 domain-containing protein	NA	NA	NA	NA
WP_148878572.1\|696784_697117_+	hypothetical protein	NA	NA	NA	NA
WP_024752164.1\|699386_701393_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.6e-07	50.0
WP_024752165.1\|702051_702675_+	hypothetical protein	NA	NA	NA	NA
WP_024752166.1\|703154_704936_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	9.0e-111	37.3
WP_039943445.1\|705049_705778_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA
WP_174896963.1\|706082_707159_+\|protease	omptin family outer membrane protease	NA	NA	NA	NA
WP_024752169.1\|708097_710149_+	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	1.3e-07	28.9
WP_174897291.1\|711010_712162_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	3.5e-07	54.0
WP_174896964.1\|712302_713442_+	FIST C-terminal domain-containing protein	NA	NA	NA	NA
WP_024752172.1\|713443_713986_+	hypothetical protein	A0A2H4J162	uncultured_Caudovirales_phage	4.7e-10	39.1
WP_052335743.1\|714047_715301_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_024752174.1\|715381_715801_+	hypothetical protein	NA	NA	NA	NA
WP_024752175.1\|715878_716589_-	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_044634423.1\|716844_718029_-	hypothetical protein	NA	NA	NA	NA
WP_174896965.1\|718055_718847_-	isochorismatase family protein	NA	NA	NA	NA
WP_024752178.1\|719379_720066_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_044634425.1\|720201_721557_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA
WP_148879194.1\|721650_721929_-	hypothetical protein	NA	NA	NA	NA
WP_174896966.1\|722281_722713_+	hypothetical protein	NA	NA	NA	NA
WP_174896967.1\|722684_725132_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_174897292.1\|725086_725479_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_024752184.1\|726858_727140_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_3

1517073 : 1565778

Moraxella_phage(16.67%)

integrase,transposase

attL 1553288:1553313|attR 1571503:1571528

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148878613.1\|1517073_1518327_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_008902116.1\|1521007_1521220_+	helix-turn-helix transcriptional regulator	A0A2I7SC34	Paenibacillus_phage	1.2e-09	48.3
WP_174897304.1\|1521255_1522545_+	site-specific DNA-methyltransferase	A0A2K5B255	Erysipelothrix_phage	8.7e-31	28.6
WP_024753547.1\|1522610_1522892_+	hypothetical protein	NA	NA	NA	NA
WP_024753548.1\|1522919_1523708_+	DUF4111 domain-containing protein	NA	NA	NA	NA
WP_081718841.1\|1523761_1524622_+	hypothetical protein	NA	NA	NA	NA
WP_024753550.1\|1524660_1525650_+	hypothetical protein	NA	NA	NA	NA
WP_024753551.1\|1526025_1527093_+	DNA cytosine methyltransferase	A0A0R6PG08	Moraxella_phage	8.2e-59	38.8
WP_174897073.1\|1527089_1529195_+	sensor histidine kinase	NA	NA	NA	NA
WP_024753555.1\|1530420_1530582_+	hypothetical protein	NA	NA	NA	NA
WP_024751818.1\|1534245_1535427_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_174897074.1\|1535457_1535823_-	hypothetical protein	NA	NA	NA	NA
WP_174897075.1\|1535894_1537115_-	MFS transporter	D0R099	Streptococcus_phage	2.8e-23	24.9
WP_174897076.1\|1537118_1538036_-	DUF1848 domain-containing protein	NA	NA	NA	NA
WP_044634501.1\|1538569_1538851_+\|transposase	transposase	NA	NA	NA	NA
WP_024751992.1\|1539999_1541016_-\|transposase	IS5 family transposase	Q38213	Escherichia_phage	9.0e-23	30.3
WP_174897077.1\|1541118_1541337_-	helix-turn-helix domain-containing protein	A0A1P8BML9	Lactococcus_phage	2.1e-06	35.4
WP_024753570.1\|1541415_1541574_-	conjugal transfer protein	NA	NA	NA	NA
WP_024753571.1\|1541814_1542126_-	DUF3847 domain-containing protein	NA	NA	NA	NA
WP_174897078.1\|1542233_1543538_-	type II restriction endonuclease	NA	NA	NA	NA
WP_024753573.1\|1543530_1544385_-	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	6.7e-72	47.9
WP_024753574.1\|1544507_1545287_-	replication initiator protein A	NA	NA	NA	NA
WP_081718842.1\|1545393_1545792_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_024753575.1\|1546170_1547349_-	hypothetical protein	NA	NA	NA	NA
WP_009242836.1\|1547363_1547774_-	hypothetical protein	NA	NA	NA	NA
WP_024753576.1\|1547793_1549863_-	DUF262 domain-containing protein	NA	NA	NA	NA
WP_156009310.1\|1549867_1550011_-	hypothetical protein	NA	NA	NA	NA
WP_024753577.1\|1550437_1551679_+	peptidase T	NA	NA	NA	NA
WP_002694883.1\|1551852_1553139_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA
1553288:1553313	attL	NA	NA	NA	NA
WP_024753579.1\|1553435_1555565_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	7.2e-30	27.1
WP_024753580.1\|1555557_1556490_+	M23 family metallopeptidase	Q8SBN9	Clostridium_phage	8.6e-12	44.3
WP_024753581.1\|1557592_1559392_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.4e-42	30.1
WP_174897079.1\|1559449_1561258_+	ABC transporter ATP-binding protein	A0A1V0SE00	Indivirus	5.9e-17	27.8
WP_039943996.1\|1561975_1564321_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	7.9e-147	39.5
WP_174896884.1\|1564674_1564836_-	hypothetical protein	NA	NA	NA	NA
WP_024752184.1\|1564879_1565161_+\|transposase	transposase	NA	NA	NA	NA
WP_174897080.1\|1565157_1565778_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
1571503:1571528	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1748233 : 1756973

Marinitoga_camini_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024751636.1\|1748233_1749013_+	ATP-binding protein	A0A0D4DBZ2	Acinetobacter_phage	7.9e-11	25.7
WP_002697435.1\|1750346_1750538_+	hypothetical protein	NA	NA	NA	NA
WP_174897094.1\|1750534_1751332_+	hypothetical protein	NA	NA	NA	NA
WP_174897095.1\|1751353_1753036_+	hypothetical protein	S5MBV8	Brevibacillus_phage	1.9e-70	35.8
WP_174897096.1\|1753068_1754610_+	hypothetical protein	A0A0A7NP12	Lactobacillus_phage	2.3e-14	27.4
WP_024751710.1\|1754641_1754953_+	hypothetical protein	D2ECI8	Treponema_phage	2.6e-05	64.9
WP_174897097.1\|1755047_1755473_+	antA/AntB antirepressor family protein	A0A139ZPI9	Marinitoga_camini_virus	5.3e-17	49.1
WP_174897098.1\|1755448_1755772_+	phage antirepressor KilAC domain-containing protein	A0A139ZPI9	Marinitoga_camini_virus	1.8e-09	38.0
WP_174897011.1\|1755768_1756647_+	DNA adenine methylase	A0A0H3UZK1	Geobacillus_virus	2.8e-28	32.8
WP_174897012.1\|1756643_1756973_+	DUF4406 domain-containing protein	A0A1B0YZW9	Pseudomonas_phage	1.0e-12	40.4

DBSCAN-SWA_5

1853737 : 1916332

Staphylococcus_phage(20.0%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002699091.1\|1853737_1854331_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	3.1e-31	38.9
WP_024752388.1\|1856122_1857556_+	amino acid permease	NA	NA	NA	NA
WP_002699081.1\|1858295_1859234_+	AEC family transporter	NA	NA	NA	NA
WP_002699078.1\|1859716_1860094_+	GntR family transcriptional regulator	NA	NA	NA	NA
WP_002699076.1\|1860106_1860973_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.0e-18	30.1
WP_174897122.1\|1860974_1861670_+	hypothetical protein	NA	NA	NA	NA
WP_148878990.1\|1862134_1862461_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_024751882.1\|1862421_1862673_-	hypothetical protein	NA	NA	NA	NA
WP_044634652.1\|1862991_1863786_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.6e-43	36.5
WP_174897123.1\|1863782_1865069_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.7e-90	45.9
WP_024751884.1\|1865087_1865669_-	hypothetical protein	NA	NA	NA	NA
WP_002698298.1\|1866032_1866545_+	hypothetical protein	NA	NA	NA	NA
WP_024751886.1\|1866544_1867294_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	NA	NA	NA
WP_174897306.1\|1867713_1868979_-	DUF3160 domain-containing protein	NA	NA	NA	NA
WP_174897307.1\|1868930_1869584_-	DUF3160 domain-containing protein	NA	NA	NA	NA
WP_024751890.1\|1870448_1870832_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_024751891.1\|1870876_1871506_-	adenylate kinase	NA	NA	NA	NA
WP_081718631.1\|1872220_1872409_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_002698319.1\|1872423_1872660_+	acyl carrier protein	NA	NA	NA	NA
WP_024751892.1\|1872678_1873410_+	ribonuclease III	L7RCJ8	Acanthamoeba_polyphaga_moumouvirus	1.3e-23	30.3
WP_024751992.1\|1873508_1874525_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	9.0e-23	30.3
WP_024751893.1\|1874690_1875449_+	acid phosphatase AphA	NA	NA	NA	NA
WP_052812563.1\|1875964_1876588_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_174897124.1\|1876982_1877702_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_039914919.1\|1877691_1878225_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	5.8e-21	36.8
WP_002698332.1\|1878464_1879400_-	TraB/GumN family protein	NA	NA	NA	NA
WP_002698334.1\|1879482_1880517_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_024751895.1\|1880775_1881603_-	hypothetical protein	NA	NA	NA	NA
WP_024751896.1\|1881617_1882316_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.3e-20	27.8
WP_024751897.1\|1882318_1882678_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_174897125.1\|1883607_1886346_-	pyruvate, phosphate dikinase	NA	NA	NA	NA
WP_024751899.1\|1886357_1887380_-	hypothetical protein	NA	NA	NA	NA
WP_024751900.1\|1887479_1889519_-	cytochrome c oxidase subunit II	NA	NA	NA	NA
WP_002698356.1\|1889677_1890337_+	VWA domain-containing protein	NA	NA	NA	NA
WP_002698358.1\|1890629_1891862_+	FprA family A-type flavoprotein	NA	NA	NA	NA
WP_024751901.1\|1892362_1893949_-\|tRNA	lysine--tRNA ligase	NA	NA	NA	NA
WP_024751902.1\|1894563_1895055_-	universal stress protein	NA	NA	NA	NA
WP_024751903.1\|1895144_1895786_-	V-type ATP synthase subunit D	NA	NA	NA	NA
WP_024751904.1\|1895890_1900183_-	DNA-directed RNA polymerase subunit beta'	A0A2I7QNZ7	Vibrio_phage	9.3e-69	26.0
WP_002698374.1\|1900196_1903721_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.8e-47	23.0
WP_024751905.1\|1904233_1904623_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_002698382.1\|1904759_1905389_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_024751906.1\|1905390_1906071_-	50S ribosomal protein L1	NA	NA	NA	NA
WP_002698386.1\|1906072_1906504_-	50S ribosomal protein L11	NA	NA	NA	NA
WP_002698388.1\|1906586_1907144_-	transcription termination/antitermination factor NusG	NA	NA	NA	NA
WP_024751907.1\|1907153_1907333_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_002698390.1\|1907471_1907642_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_024751908.1\|1908053_1908494_-	flavodoxin	NA	NA	NA	NA
WP_024751909.1\|1908516_1909092_-	DUF3793 family protein	NA	NA	NA	NA
WP_148889533.1\|1909815_1911069_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_148879384.1\|1911335_1912736_+	GntP family permease	NA	NA	NA	NA
WP_024752901.1\|1912766_1914320_+	hypothetical protein	NA	NA	NA	NA
WP_024752900.1\|1914391_1914805_+	MaoC family dehydratase	NA	NA	NA	NA
WP_148889537.1\|1915109_1915469_+	hypothetical protein	NA	NA	NA	NA
WP_024751913.1\|1915858_1916332_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_6

1942650 : 1949540

Caulobacter_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024751945.1\|1942650_1944114_-	DNA-packaging protein	A0A0K1LMR9	Caulobacter_phage	1.0e-51	33.0
WP_174897134.1\|1944091_1944694_-	hypothetical protein	NA	NA	NA	NA
WP_174897135.1\|1944926_1945070_-	hypothetical protein	NA	NA	NA	NA
WP_024751949.1\|1945195_1945720_-	ASCH domain-containing protein	A0A291AUQ6	Sinorhizobium_phage	3.9e-06	26.8
WP_174897136.1\|1946186_1946402_-	hypothetical protein	NA	NA	NA	NA
WP_174897137.1\|1946398_1946728_-	DUF4406 domain-containing protein	A0A1B0YZW9	Pseudomonas_phage	9.4e-14	41.5
WP_174897138.1\|1946831_1947653_-	antA/AntB antirepressor family protein	A0A139ZPI9	Marinitoga_camini_virus	3.0e-37	42.7
WP_024751625.1\|1947747_1948059_-	hypothetical protein	D2ECI8	Treponema_phage	2.6e-05	64.9
WP_044634724.1\|1948116_1948620_-	hypothetical protein	NA	NA	NA	NA
WP_174897308.1\|1948841_1949540_-	site-specific DNA-methyltransferase	A0A2I7QJ51	Vibrio_phage	1.1e-30	37.1

DBSCAN-SWA_7

2782658 : 2855606

Escherichia_phage(22.22%)

transposase,protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044634314.1\|2782658_2783705_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_024753096.1\|2784167_2784935_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_024753095.1\|2784977_2786258_+	M18 family aminopeptidase	NA	NA	NA	NA
WP_004266435.1\|2786574_2787102_+	nitroreductase family protein	NA	NA	NA	NA
WP_024753094.1\|2787361_2788543_-	exodeoxyribonuclease VII large subunit	A0A1V0SD82	Indivirus	5.5e-40	36.4
WP_004266433.1\|2788921_2789830_-	thioredoxin family protein	NA	NA	NA	NA
WP_004266430.1\|2790200_2791118_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_148879179.1\|2791160_2792804_-	hypothetical protein	NA	NA	NA	NA
WP_024753092.1\|2792877_2794437_-	BCCT family transporter	NA	NA	NA	NA
WP_081718788.1\|2794490_2796281_-	phosphotransferase	NA	NA	NA	NA
WP_024753090.1\|2796736_2797657_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_174897237.1\|2798522_2798696_+	hypothetical protein	NA	NA	NA	NA
WP_174897238.1\|2798729_2799701_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA
WP_174897316.1\|2799696_2800227_+	hypothetical protein	NA	NA	NA	NA
WP_024753088.1\|2800447_2802025_-	exo-alpha-sialidase	NA	NA	NA	NA
WP_024753085.1\|2802510_2803467_+	M28 family peptidase	NA	NA	NA	NA
WP_024753084.1\|2803478_2804111_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_002699174.1\|2804144_2804573_-	GNAT family N-acetyltransferase	Q2WC48	Escherichia_phage	8.5e-07	31.3
WP_024753082.1\|2805011_2805701_+	DUF554 domain-containing protein	NA	NA	NA	NA
WP_148879450.1\|2806031_2806220_+	hypothetical protein	NA	NA	NA	NA
WP_148879183.1\|2806216_2806879_-	hypothetical protein	NA	NA	NA	NA
WP_002699166.1\|2807177_2807750_+	chromate transporter	NA	NA	NA	NA
WP_002699164.1\|2807746_2808310_+	chromate transporter	NA	NA	NA	NA
WP_162147461.1\|2808825_2809368_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_024753077.1\|2810233_2812705_+\|protease	ATP-dependent Clp protease ATP-binding subunit	K4FB40	Cronobacter_phage	3.0e-120	37.6
WP_002697999.1\|2812741_2813227_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA
WP_024753074.1\|2814112_2815486_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_002698671.1\|2815554_2816544_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_174897239.1\|2816839_2817796_+	hydroxyacid dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	2.5e-35	32.1
WP_039943739.1\|2818596_2819001_-	hypothetical protein	NA	NA	NA	NA
WP_002698660.1\|2818997_2820119_-	ABC transporter	NA	NA	NA	NA
WP_024753071.1\|2820119_2821160_-	ABC transporter	NA	NA	NA	NA
WP_024753070.1\|2821160_2822741_-	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.5e-11	27.3
WP_002698654.1\|2822861_2824103_-	DUF3798 domain-containing protein	NA	NA	NA	NA
WP_024753069.1\|2825266_2826460_+	coenzyme F420-0:L-glutamate ligase	NA	NA	NA	NA
WP_002700292.1\|2827175_2827787_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
WP_024753068.1\|2827839_2828988_+	S-methyl-5-thioribose kinase	NA	NA	NA	NA
WP_044634679.1\|2829134_2831558_+	hypothetical protein	NA	NA	NA	NA
WP_024753066.1\|2832166_2832961_-	cytochrome c biogenesis protein CcdA	NA	NA	NA	NA
WP_024753065.1\|2832953_2833532_-	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_174897240.1\|2834177_2835356_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_024751992.1\|2835619_2836636_+\|transposase	IS5 family transposase	Q38213	Escherichia_phage	9.0e-23	30.3
WP_024753063.1\|2836820_2837234_+	hypothetical protein	NA	NA	NA	NA
WP_148879451.1\|2837487_2837616_+\|transposase	transposase family protein	NA	NA	NA	NA
WP_024753062.1\|2837756_2838014_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_024753061.1\|2838197_2840108_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_024753060.1\|2840294_2841209_-	1-phosphofructokinase	NA	NA	NA	NA
WP_002699592.1\|2841230_2841977_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA
WP_002699590.1\|2842293_2842866_+	peroxiredoxin	NA	NA	NA	NA
WP_174897241.1\|2843637_2844003_+	DUF2715 domain-containing protein	NA	NA	NA	NA
WP_148879210.1\|2844343_2845240_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_024753057.1\|2845243_2846905_-	glycosyl hydrolase family 3	NA	NA	NA	NA
WP_148879209.1\|2846904_2847828_-	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.1e-74	44.8
WP_024753055.1\|2848584_2849490_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024753054.1\|2849583_2851131_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002699573.1\|2852102_2852915_+	ABC transporter permease	NA	NA	NA	NA
WP_002699571.1\|2852911_2853718_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	5.0e-08	26.4
WP_044634513.1\|2853710_2854373_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	5.3e-08	26.3
WP_024751818.1\|2854424_2855606_-\|transposase	IS630 family transposase	NA	NA	NA	NA

DBSCAN-SWA_8

2874636 : 2924502

Micromonas_pusilla_virus(16.67%)

capsid,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_174897242.1\|2874636_2874879_-\|transposase	transposase	NA	NA	NA	NA
WP_024753035.1\|2875271_2875868_+	cytidylate kinase-like family protein	NA	NA	NA	NA
WP_024753034.1\|2876064_2877138_-	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_024753033.1\|2877206_2878148_-	hypothetical protein	NA	NA	NA	NA
WP_081718782.1\|2878144_2878975_-	transketolase	G9E5U1	Micromonas_pusilla_virus	3.2e-10	33.3
WP_024753032.1\|2879182_2880451_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_024753031.1\|2880535_2880820_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_148879202.1\|2881536_2882217_-	hypothetical protein	NA	NA	NA	NA
WP_024753029.1\|2882194_2882920_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_024753028.1\|2882921_2883473_-	biotin transporter BioY	NA	NA	NA	NA
WP_024753025.1\|2884343_2885450_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_044634523.1\|2885897_2886980_-	6-phosphofructokinase	NA	NA	NA	NA
WP_174897317.1\|2887089_2889090_+	hypothetical protein	NA	NA	NA	NA
WP_024753023.1\|2889145_2889769_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	8.8e-29	40.1
WP_024753022.1\|2889768_2891415_-	iron ABC transporter permease	NA	NA	NA	NA
WP_002699542.1\|2891429_2892449_-	thiamine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002699538.1\|2892919_2893885_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_148889730.1\|2893915_2894944_-	FAD:protein FMN transferase	NA	NA	NA	NA
WP_002699534.1\|2894994_2896044_-	hypothetical protein	NA	NA	NA	NA
WP_024753017.1\|2896253_2896868_+	hypothetical protein	NA	NA	NA	NA
WP_002699530.1\|2896908_2897190_+	hypothetical protein	NA	NA	NA	NA
WP_148879397.1\|2897274_2897451_-	DUF2075 domain-containing protein	NA	NA	NA	NA
WP_148884455.1\|2897447_2897783_-	hypothetical protein	NA	NA	NA	NA
WP_174897243.1\|2898051_2898525_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_174896886.1\|2898443_2899259_+	hypothetical protein	NA	NA	NA	NA
WP_002696721.1\|2899383_2899584_-	hypothetical protein	NA	NA	NA	NA
WP_024753013.1\|2899701_2899926_+	hypothetical protein	NA	NA	NA	NA
WP_174897244.1\|2900078_2900666_-\|transposase	ISAs1 family transposase	NA	NA	NA	NA
WP_148878579.1\|2900655_2900778_-\|transposase	transposase	NA	NA	NA	NA
WP_174897245.1\|2901726_2902413_-	site-specific DNA-methyltransferase	A0A1P8CMS8	Staphylococcus_phage	2.9e-33	34.7
WP_024751770.1\|2902571_2902757_-	hypothetical protein	NA	NA	NA	NA
WP_174897275.1\|2902740_2903013_-	hypothetical protein	NA	NA	NA	NA
WP_148879504.1\|2904179_2905430_-	DUF935 family protein	NA	NA	NA	NA
WP_002696334.1\|2905426_2906953_-	hypothetical protein	A0A0N7AEF1	Bacillus_phage	9.0e-51	29.1
WP_002696333.1\|2906949_2907486_-	DUF3486 family protein	NA	NA	NA	NA
WP_024751680.1\|2907501_2907792_-	hypothetical protein	NA	NA	NA	NA
WP_044634729.1\|2907818_2908217_-	hypothetical protein	NA	NA	NA	NA
WP_174897246.1\|2908221_2908527_-	hypothetical protein	NA	NA	NA	NA
WP_024751775.1\|2908480_2908843_-	hypothetical protein	NA	NA	NA	NA
WP_024751776.1\|2908826_2909162_-	hypothetical protein	NA	NA	NA	NA
WP_024751777.1\|2909185_2909740_-	N-acetylmuramoyl-L-alanine amidase	A0A0B5CTW5	Listeria_phage	1.4e-22	35.3
WP_081718572.1\|2909856_2910081_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_148884621.1\|2910232_2910679_-	DUF1018 domain-containing protein	A4JWM5	Burkholderia_virus	5.5e-09	32.1
WP_002696309.1\|2910758_2911271_-	host-nuclease inhibitor Gam family protein	NA	NA	NA	NA
WP_002696308.1\|2911312_2911507_-	hypothetical protein	NA	NA	NA	NA
WP_174897247.1\|2911511_2912213_-	hypothetical protein	NA	NA	NA	NA
WP_174897318.1\|2912214_2913150_-	AAA family ATPase	NA	NA	NA	NA
WP_174896974.1\|2913161_2915042_-\|transposase	transposase	NA	NA	NA	NA
WP_174896938.1\|2915575_2916163_+	hypothetical protein	NA	NA	NA	NA
WP_148878542.1\|2916271_2916712_-	hypothetical protein	NA	NA	NA	NA
WP_148878543.1\|2916723_2917164_-	hypothetical protein	NA	NA	NA	NA
WP_174897248.1\|2917705_2918473_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002695871.1\|2918654_2918945_+	hypothetical protein	NA	NA	NA	NA
WP_148878545.1\|2918931_2919492_+	hypothetical protein	NA	NA	NA	NA
WP_174897249.1\|2919955_2920933_+	hypothetical protein	NA	NA	NA	NA
WP_174897250.1\|2921274_2922207_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_024752645.1\|2922268_2922727_+	hypothetical protein	NA	NA	NA	NA
WP_148878912.1\|2923305_2924502_+\|transposase	IS630 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP054692.1|WP_174897237.1|2798522_2798696_+|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_002699530.1|2896908_2897190_+|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_148884455.1|2897447_2897783_-|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_002696308.1|2911312_2911507_-|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_174896938.1|2915575_2916163_+|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_148878542.1|2916271_2916712_-|hypothetical-protein

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Acr_ID: NZ_CP054692.1|WP_148878543.1|2916723_2917164_-|hypothetical-protein

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Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP054692.1|WP_174897237.1|2798522_2798696_+|hypothetical-protein

2798522_2798696_+

57 aa aa

2782658-2855606

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_9	Orphan	9.1\|1792667\|56\|NZ_CP054692\|CRISPRCasFinder	1792667-1792722	56	2806109-2806054	1
NZ_CP054692_17	Orphan	17.1\|2556073\|56\|NZ_CP054692\|CRISPRCasFinder	2556073-2556128	56	2806109-2806054	1

1. spacer 9.1|1792667|56|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2806109-2806054, mismatch: 1

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

2. spacer 17.1|2556073|56|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2806109-2806054, mismatch: 1

aaaagcttcaattttataaaacagtgttgatgcttttaaacatcgtttagaattga	CRISPR spacer
aaaagcttcaattttacaaaacagtgttgatgcttttaaacatcgtttagaattga	Protospacer
****************.***************************************

NZ_CP054692.1|WP_002699530.1|2896908_2897190_+|hypothetical-protein

2896908_2897190_+

93 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

NZ_CP054692.1|WP_148884455.1|2897447_2897783_-|hypothetical-protein

2897447_2897783_-

111 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

NZ_CP054692.1|WP_002696308.1|2911312_2911507_-|hypothetical-protein

2911312_2911507_-

64 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

NZ_CP054692.1|WP_174896938.1|2915575_2916163_+|hypothetical-protein

2915575_2916163_+

195 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

NZ_CP054692.1|WP_148878542.1|2916271_2916712_-|hypothetical-protein

2916271_2916712_-

146 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

NZ_CP054692.1|WP_148878543.1|2916723_2917164_-|hypothetical-protein

2916723_2917164_-

146 aa aa

2874636-2924502

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP054692_5	Orphan	5.1\|1282874\|18\|NZ_CP054692\|CRISPRCasFinder	1282874-1282891	18	2897947-2897964	0

1. spacer 5.1|1282874|18|NZ_CP054692|CRISPRCasFinder matches to NZ_CP054692 position: 2897947-2897964, mismatch: 0

tgtctttaatctgtgata	CRISPR spacer
tgtctttaatctgtgata	Protospacer
******************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP054692

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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