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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP054735 Klebsiella pneumoniae strain KP20194d plasmid pKP20194d-p3, complete sequence 0 crisprs RT 0 0 1 0
NZ_CP054732 Klebsiella pneumoniae strain KP20194d chromosome, complete genome 1 crisprs csa3,RT,cas3,DEDDh,DinG,WYL 0 0 12 0
NZ_CP054733 Klebsiella pneumoniae strain KP20194d plasmid pKP20194d-p1, complete sequence 0 crisprs NA 0 0 2 0
NZ_CP054734 Klebsiella pneumoniae strain KP20194d plasmid pKP20194d-p2, complete sequence 0 crisprs RT 0 0 2 0
NZ_CP054737 Klebsiella pneumoniae strain KP20194d plasmid pKP20194d-p5, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP054736 Klebsiella pneumoniae strain KP20194d plasmid pKP20194d-p4, complete sequence 0 crisprs RT 0 0 0 0

Results visualization

1. NZ_CP054735
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 15558 : 55024 41 Escherichia_phage(28.57%) transposase,integrase attL 37246:37305|attR 50532:51353
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP054732
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP054732_1 4600452-4600546 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 448676 : 528774 78 uncultured_Caudovirales_phage(57.14%) terminase,capsid,protease,integrase,tRNA,head,tail,transposase,portal attL 466284:466301|attR 482279:482296
DBSCAN-SWA_2 1176773 : 1262106 97 Salmonella_phage(69.23%) terminase,capsid,integrase,tRNA,plate,head,tail,lysis,transposase,portal attL 1190527:1190546|attR 1239207:1239226
DBSCAN-SWA_3 1368128 : 1434353 71 Salmonella_phage(32.08%) terminase,holin,integrase,protease,tail,transposase attL 1369123:1369140|attR 1437101:1437118
DBSCAN-SWA_4 1746162 : 1753067 6 Planktothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_5 1797612 : 1808636 9 Escherichia_phage(33.33%) transposase NA
DBSCAN-SWA_6 2798569 : 2809456 9 Escherichia_phage(87.5%) NA NA
DBSCAN-SWA_7 3002726 : 3074491 83 uncultured_Caudovirales_phage(33.33%) terminase,holin,integrase,plate,transposase attL 3065604:3065618|attR 3071613:3071627
DBSCAN-SWA_8 3107424 : 3159113 60 Enterobacteria_phage(29.41%) holin,integrase,protease,transposase attL 3107206:3107221|attR 3134471:3134486
DBSCAN-SWA_9 3264837 : 3372722 125 Klebsiella_phage(35.44%) terminase,capsid,holin,tRNA,protease,integrase,head,tail,portal attL 3291640:3291654|attR 3373062:3373076
DBSCAN-SWA_10 3591230 : 3684181 94 Salmonella_phage(58.62%) terminase,capsid,protease,tRNA,plate,integrase,head,tail,lysis,portal attL 3646756:3646774|attR 3684256:3684274
DBSCAN-SWA_11 4337165 : 4348818 13 Enterobacteria_phage(70.0%) integrase attL 4337615:4337629|attR 4360671:4360685
DBSCAN-SWA_12 4819455 : 4828980 11 Enterobacteria_phage(85.71%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP054734
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1796 : 52421 53 Escherichia_phage(33.33%) protease,transposase NA
DBSCAN-SWA_2 82848 : 94007 10 Escherichia_phage(50.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
4. NZ_CP054733
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 15236 : 88239 59 Salmonella_phage(25.0%) transposase,integrase NA
DBSCAN-SWA_2 129635 : 194167 56 Caulobacter_phage(15.79%) protease,transposase,integrase attL 135344:135359|attR 190274:190289
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage