CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP053614	Proteus mirabilis strain MPE0108 chromosome, complete genome	1 crisprs	c2c9_V-U4,cas3,DEDDh,DinG,csa3	0	2	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP053614_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP053614_1

688954-689093

Orphan

Consensus_repeat	Method
CCCAGTTCCCAACTATTTTGTCA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP053614_1

>merge|NZ_CP053614|1|688954-689093|PILER-CR
AGTTCCAAACTATTTTGTCATTTTTAATTTTCGTATTAGCTTACGACGCTACACCCAGTTCCCATCTATTTTGTCACTCTTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCCAGTTCCCAACTATTTTGTCC

>NZ_CP053614|1|1|688954-689093|PILER-CR
AGTTCCAAACTATTTTGTCATTT	TTAATTTTCGTATTAGCTTACGACGCTACACCC
AGTTCCCATCTATTTTGTCACTC	TTCCCTAAATAATCCTTAAAAACTCCATTTCCACCCCTCCC
AGTTCCCAACTATTTTGTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP053614.1\|WP_001067855.1\|680834_681539_+\|IS6-like-element-IS26-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP053614.1\|WP_000777554.1\|685485_685959_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	unknown	unknown	gnl\|CDD\|238127
NZ_CP053614.1\|WP_060557305.1\|695419_696232_-\|phosphonoacetaldehyde-hydrolase	unknown	unknown	gnl\|CDD\|184075
NZ_CP053614.1\|WP_001353740.1\|688351_688591_-\|DUF1819-family-protein	unknown	unknown	gnl\|CDD\|378066
NZ_CP053614.1\|WP_000071896.1\|687186_687723_+\|class-2-integron-integrase-IntI2	unknown	unknown	gnl\|CDD\|131303
NZ_CP053614.1\|WP_001206316.1\|684677_685469_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	unknown	unknown	gnl\|CDD\|184296
NZ_CP053614.1\|WP_000679427.1\|684166_684514_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	unknown	unknown	gnl\|CDD\|279265
NZ_CP053614.1\|WP_070342364.1\|685955_686801_-\|lincosamide-nucleotidyltransferase-Lnu(F)	unknown	unknown	gnl\|CDD\|366857
NZ_CP053614.1\|WP_017628742.1\|695043_695331_-\|YjeO-family-protein	unknown	unknown	gnl\|CDD\|337858
NZ_CP053614.1\|WP_000497519.1\|687837_688164_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|131303
NZ_CP053614.1\|WP_046334910.1\|694611_695016_-\|DUF1240-domain-containing-protein	unknown	unknown	gnl\|CDD\|336520
NZ_CP053614.1\|WP_175212411.1\|699748_700387_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|172294
NZ_CP053614.1\|WP_060557304.1\|697106_698240_+\|M20-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349881
NZ_CP053614.1\|WP_060557303.1\|698249_699656_+\|YfcC-family-protein	unknown	unknown	gnl\|CDD\|224207
NZ_CP053614.1\|WP_060557308.1\|689518_690595_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|274496
NZ_CP053614.1\|WP_155195873.1\|692347_693355_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|274494
NZ_CP053614.1\|WP_060557306.1\|693409_694537_+\|TIGR03364-family-FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132407
NZ_CP053614.1\|WP_000184001.1\|681644_682850_-\|chromate-efflux-transporter	unknown	unknown	gnl\|CDD\|273350
NZ_CP053614.1\|WP_060557307.1\|690607_692299_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|274495
NZ_CP053614.1\|WP_000376616.1\|683005_683209_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP053614.1\|WP_001067855.1\|680834_681539_+\|IS6-like-element-IS26-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.30323e-69
NZ_CP053614.1\|WP_000777554.1\|685485_685959_-\|trimethoprim-resistant-dihydrofolate-reductase-DfrA1	gnl\|CDD\|238127	cd00209, DHFR, Dihydrofolate reductase (DHFR). Reduces 7,8-dihydrofolate to 5,6,7,8-tetrahydrofolate with NADPH as a cofactor. This is an essential step in the biosynthesis of deoxythymidine phosphate since 5,6,7,8-tetrahydrofolate is required to regenerate 5,10-methylenetetrahydrofolate which is then utilized by thymidylate synthase. Inhibition of DHFR interrupts thymidilate synthesis and DNA replication, inhibitors of DHFR (such as Methotrexate) are used in cancer chemotherapy. 5,6,7,8-tetrahydrofolate also is involved in glycine, serine, and threonine metabolism and aminoacyl-tRNA biosynthesis.	3.39419e-57
NZ_CP053614.1\|WP_060557305.1\|695419_696232_-\|phosphonoacetaldehyde-hydrolase	gnl\|CDD\|184075	PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional.	6.53663e-158
NZ_CP053614.1\|WP_001353740.1\|688351_688591_-\|DUF1819-family-protein	gnl\|CDD\|378066	pfam08849, DUF1819, Putative inner membrane protein (DUF1819). These proteins are functionally uncharacterized. Several are annotated as putative inner membrane proteins.	2.15941e-15
NZ_CP053614.1\|WP_000071896.1\|687186_687723_+\|class-2-integron-integrase-IntI2	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	3.54716e-72
NZ_CP053614.1\|WP_060557306.1\|693409_694537_+\|TIGR03364-family-FAD-dependent-oxidoreductase	gnl\|CDD\|132407	TIGR03364, putative_secreted_oxidoreductase, FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.	1.89125e-148
NZ_CP053614.1\|WP_000679427.1\|684166_684514_-\|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1	gnl\|CDD\|279265	pfam00893, Multi_Drug_Res, Small Multidrug Resistance protein. This family is the Small Multidrug Resistance (SMR) family. Several members have been shown to export a range of toxins, including ethidium bromide and quaternary ammonium compounds, through coupling with proton influx.	4.88768e-29
NZ_CP053614.1\|WP_070342364.1\|685955_686801_-\|lincosamide-nucleotidyltransferase-Lnu(F)	gnl\|CDD\|366857	pfam01909, NTP_transf_2, Nucleotidyltransferase domain. Members of this family belong to a large family of nucleotidyltransferases. This family includes kanamycin nucleotidyltransferase (KNTase) which is a plasmid-coded enzyme responsible for some types of bacterial resistance to aminoglycosides. KNTase in-activates antibiotics by catalyzing the addition of a nucleotidyl group onto the drug.	0.000202488
NZ_CP053614.1\|WP_017628742.1\|695043_695331_-\|YjeO-family-protein	gnl\|CDD\|337858	pfam10840, DUF2645, Protein of unknown function (DUF2645). This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YjeO however no function for this protein is currently known.	2.113e-18
NZ_CP053614.1\|WP_000497519.1\|687837_688164_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|131303	TIGR02249, Integrase/recombinase_E2_protein., integron integrase. Members of this family are integrases associated with integrons (and super-integrons), which are systems for incorporating and expressing cassettes of laterally transferred DNA. Incorporation occurs at an attI site. A super-integron, as in Vibrio sp., may include over 100 cassettes. This family belongs to the phage integrase family (pfam00589) that also includes recombinases XerC (TIGR02224) and XerD (TIGR02225), which are bacterial housekeeping proteins. Within this family of integron integrases, some are designated by class, e.g. IntI4, a class 4 integron integrase from Vibrio cholerae N16961. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Other].	2.82591e-45
NZ_CP053614.1\|WP_046334910.1\|694611_695016_-\|DUF1240-domain-containing-protein	gnl\|CDD\|336520	pfam06836, DUF1240, Protein of unknown function (DUF1240). This family consists of a number of hypothetical putative membrane proteins which seem to be specific to Yersinia pestis. The function of this family is unknown.	9.59132e-32
NZ_CP053614.1\|WP_060557304.1\|697106_698240_+\|M20-family-metallopeptidase	gnl\|CDD\|349881	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme. Peptidase M20 family, Glutamate carboxypeptidase (carboxypeptidase G; carboxypeptidase G1; carboxypeptidase G2; CPDG2; CPG2; Folate hydrolase G2; Pteroylmonoglutamic acid hydrolase G2; Glucarpidase; E.C. 3.4.17.11) subfamily. CPDG2 is a periplasmic enzyme that is synthesized with a signal peptide. It is a dimeric zinc-dependent exopeptidase, with two domains, a catalytic domain, which provides the ligands for the two zinc ions in the active site, and a dimerization domain. CPDG2 cleaves the C-terminal glutamate moiety from a wide range of N-acyl groups, including peptidyl, aminoacyl, benzoyl, benzyloxycarbonyl, folyl, and pteroyl groups to release benzoic acid, phenol, and aniline mustards. It is used clinically to treat methotrexate toxicity by hydrolyzing it to inactive and non-toxic metabolites. It is also proposed for use in antibody-directed enzyme prodrug therapy; for example, glutamate can be cleaved from glutamated benzoyl nitrogen mustards, producing nitrogen mustards with effective cytotoxicity against tumor cells.	1.94082e-157
NZ_CP053614.1\|WP_060557303.1\|698249_699656_+\|YfcC-family-protein	gnl\|CDD\|224207	COG1288, COG1288, Predicted membrane protein [Function unknown].	5.19724e-113
NZ_CP053614.1\|WP_060557308.1\|689518_690595_+\|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|274496	TIGR03265, PhnT2, putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP053614.1\|WP_155195873.1\|692347_693355_+\|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|274494	TIGR03261, phnS2, putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein. This ABC transporter extracellular solute-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP053614.1\|WP_175212411.1\|699748_700387_-\|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein	gnl\|CDD\|172294	PRK13756, PRK13756, TetR family transcriptional regulator.	1.66758e-26
NZ_CP053614.1\|WP_000184001.1\|681644_682850_-\|chromate-efflux-transporter	gnl\|CDD\|273350	TIGR00937, Chromate_transport_protein, chromate transporter, chromate ion transporter (CHR) family. Members of this family probably act as chromate transporters, and are found in Pseudomonas aeruginosa, Alcaligenes eutrophus, Vibrio cholerae, Bacillus subtilis, Ochrobactrum tritici, cyanobacteria and archaea. The protein reduces chromate accumulation and is essential for chromate resistance. [Transport and binding proteins, Anions].	1.11673e-91
NZ_CP053614.1\|WP_060557307.1\|690607_692299_+\|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit	gnl\|CDD\|274495	TIGR03262, PhnU2, putative 2-aminoethylphosphonate ABC transporter, permease protein. [Transport and binding proteins, Amino acids, peptides and amines].	0
NZ_CP053614.1\|WP_001206316.1\|684677_685469_-\|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1	gnl\|CDD\|184296	PRK13746, PRK13746, aminoglycoside resistance protein; Provisional.	9.26402e-177

>NZ_CP053614.1|WP_001353740.1|688351_688591_-|DUF1819-family-protein
MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKENVLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC
>NZ_CP053614.1|WP_000497519.1|687837_688164_+|tyrosine-type-recombinase/integrase
MFVFPSSTLCNHPYNGKLCRHHLHDSVARKALKAAVQKAGIVSKRVTCHTFRHSFATHLLQAGRDIRTVQELLGHNDVKTTQIYTHVLGQHFAGTTSPADGLMLLINQ
>NZ_CP053614.1|WP_000071896.1|687186_687723_+|class-2-integron-integrase-IntI2
MSNSPFLNSIRTDMRQKGYALKTEKTYLHWIKRFILFHKKRHPQTMGSEEVRLFLSSLANSRHVAINTQKIALNALAFLYNRFLQQPLGDIDYIPASKPRRLPSVISANEVQRILQVMDTRNQVIFTLLYGAGLRINECLRLRVKDFDFDNGCITVHDGKGGKSRNSLLPTRLIPAIK
>NZ_CP053614.1|WP_070342364.1|685955_686801_-|lincosamide-nucleotidyltransferase-Lnu(F)
MLQQKMIERFKEACHEDARIIAALMFGSFAIGEGDEFSDIEFAVFIQDDHFENFDQRSWLNAVSPVAAYFPDDFGHHTALFENGIRGEFHFMRKSDIPVISTWQGYGWFPSLEEAVLLDRSGELSRYASALVGSPPKREGAPLVEGLVLNLISLMLFGANLLNRGEYARAWALLSKAHENLLKLVRLHEGATDHWPTPSRALEKDVSEDSYNRYLACTGSAEPKALCVAYHETWKWSLELFRSVAGPLNIELPRIVIAQTKRLLNESATPHNKMLTSEEEL
>NZ_CP053614.1|WP_000777554.1|685485_685959_-|trimethoprim-resistant-dihydrofolate-reductase-DfrA1
MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVGRKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEIYKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG
>NZ_CP053614.1|WP_001206316.1|684677_685469_-|ANT(3'')-Ia-family-aminoglycoside-nucleotidyltransferase-AadA1
MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLASRADQLEEFVHYVKGEITKVVGK
>NZ_CP053614.1|WP_000679427.1|684166_684514_-|quaternary-ammonium-compound-efflux-SMR-transporter-QacE-delta-1
MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAYAVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW
>NZ_CP053614.1|WP_000376616.1|683005_683209_-|hypothetical-protein
MDSEEPPNVRVACSGDIDEVVRLMHDAAAWMSAKGTPAWDVARIDRTFAETFVLRSELLGIASENGK
>NZ_CP053614.1|WP_000184001.1|681644_682850_-|chromate-efflux-transporter
MTNNPTDDSRPWSVFLIFLRLGLTSFGGPIAHLGYFRAEFVTRRRWLSERSYADLVALCQFLPGPASSQVGIAVGLSRAGYSGALAAWAGFTLPSAIALILFALGISSYGDYVSQGALHGLKVVAVAVVAQAVWGMARNLCTDGLRVTIMAIATCVVLLVPSAWGQVGVIAIAGIAGRLLFKPAKVVEHDPLPITVSHRAGVLWLSLFFVLLIGLPVLAELMPSQTMAMVDSFYRVGSLVFGGGHVVLPLLQAEVVPSGWVNNESFLAGYGAAQAVPGPLFTFAAFLGASMNTAPSGWIGGIVCLLAIFAPSFLLVVGSMPFWERLRRNTGIQAALAGINAAVVGLLLAALYQPVWTSAIFQPQDFGLALVALVALMFWKLPPWLVVLGSGAAGWLLSVAL
>NZ_CP053614.1|WP_001067855.1|680834_681539_+|IS6-like-element-IS26-family-transposase
MNPFKGRHFQRDIILWAVRWYCKYGISYRELQEMLAERGVNVDHSTIYRWVQRYAPEMEKRLRWYWRNPSDLCPWHMDETYVKVNGRWAYLYRAVDSRGRTVDFYLSSRRNSKAAYRFLGKILNNVKKWQIPRFINTDKAPAYGRALALLKREGRCPSDVEHRQIKYRNNVIECDHGKLKRIIGATLGFKSMKTAYATIKGIEVMRALRKGQASAFYYGDPLGEMRLVSRVFEM
>NZ_CP053614.1|WP_060557308.1|689518_690595_+|putative-2-aminoethylphosphonate-ABC-transporter-ATP-binding-protein
MLQFTTNSQNGSMPHIRVENIQKRFNQFIALDGVSLEIKQGELVCLLGPSGCGKTTLLRCIAGLEKQDHGSIFNYDNNISHLPPQARDYGILFQSYALFPNLTVQQNIAYGLAGQPRNVIKDRVNEMLELVGLQDRKKKYPGELSGGQQQRVALARALAPAPSLLLLDEPMSALDAQVREHLCVELRNLQQNLNITTLMVTHNQDEAMLMADRIAVMNNGKVEQYGSSEEIYNHPQTPFVAEFVGKGNWLPFNRNQHGEAMIGSREVQLKHTSIPHNQGRLFCRPESIKINPIQNKHNQYDANVQNVVFLGSRCIMKFELDHLPGHLLQAEVSAAELHSIQNGKVKVTLPANELHIFA
>NZ_CP053614.1|WP_060557307.1|690607_692299_+|putative-2-aminoethylphosphonate-ABC-transporter-permease-subunit
MSVIVPTKSINRLDSLFVAGGKLFIICLLTLGVLLPLLAIFWRGFTPDISQGGGFQAAIDLFTSANFLWLVGNSISVSLSVAVITVPLAYLFAYALHRTLIPFKSLWRGISLLPLLAPSMLPGIALVYLFGNQGLLRSLLTESIYGYWGLVLGEVIYTFPHALMILLSALSMSDARLFDAASSLGASSWRTFRSVTWSSSRHGIFAALCLVFTLTITDFGIPVVVGGDYQVLALEAYKAVLGQQQFGRGALIGMLLLLPALLTFGVDVWLRKRQRDAMSSRAQLYLPKANFQRDTLYLIFVMLICALFLLVFGTAVYSSFIQFWPYNLSFSLRHYNFEGLPGGWLAYTNSIILAFYTATIGCFLIFMGAYLIEKTVSHSWLNNLLRMLSFVPMAVPGLVLGLGYVFFFNLPNNPLNFLYGSMVLLVLCSIAHFFTTAYMTASTALRQLDKEFEAASLSLKAPLYRHFWRITIPLCLPALLDIYRYLFVSAMTTVSAAIFLYSPDTILAAVAVLNMDDAGNIGGAAAMSTLILTTSAGASILLSIASQGVIRRTQAWHQREAKQ
>NZ_CP053614.1|WP_155195873.1|692347_693355_+|putative-2-aminoethylphosphonate-ABC-transporter-substrate-binding-protein
MLKKLILATSLLFSAGTVFAATEITVYTAIESEQLQAYKQAFEAKYPDIKIKWVRDSTGIITAKLLAEKDRPQADVVWGLAASSLAILKAQNMLEPYAPAQLDDIDVKFRDSNNPPTWVGMDVWAATICYNTIEAQKLGLSKPTSWQDLTKPEYKGKIVMPNPASSGTGFLDVSAWLQIFGEQKGWAYMDKLHQNIGQYVHSGSKPCKMAASGEYPIGISFEYPAIQLKRQGAPLDIILPQEGLGWDIEATAIIKGTNKRDAAQKLADFSASKEAMKLYSANFAVLANTSVPVSQTELPRDYAQRLIKNDFIWAAEKRDTILTEWRKRYDGKSAK
>NZ_CP053614.1|WP_060557306.1|693409_694537_+|TIGR03364-family-FAD-dependent-oxidoreductase
MKFDIAVIGAGIIGLSHAYAAAQRGLRVAIFERSYTPVGASVRNFGHGLILGQAPGKMLDLAKNSREIWATMAKQANFLTRQKGTYLLARTQSEQAVLEAFVDGRAKTYGYDCELLSKTQLATVYGGQLQHHRAALHGKEDQVLFSREAIPQLAAYLGSLANVTSYFSTLVRDIDVDTGTLITSNGTFSAEKIIVCSGHDYQTLLADEIKKLDPIVCRLQMLRVTAEQNIGLAHALMTGLSCTHYGAFADLPEAQALAKEIKMQSPLIEQYGIHLLITPTPYGDLIIGDSHEYSLDAQPFNSEEVDNLLIELAEHTLGCSVQVKERWQGVYGAKGKEPISILTPSEKVTAVLMRTGLGMSVGPGLGEQNIRQLFD
>NZ_CP053614.1|WP_046334910.1|694611_695016_-|DUF1240-domain-containing-protein
MVKINSLKMYLIAIFLFSLALFCFYDSIIYYKNYFMMKDRILFSFQTGLFFFAAPLIIYFSYLIFICGYTKKTQRMNNKVAGICTGIAIVGIVFSFFFSIYVALDLTSKGYFSCYKSSAFAPNEYVIAKEMCEK
>NZ_CP053614.1|WP_017628742.1|695043_695331_-|YjeO-family-protein
MKIILRTFIFLYFIFLLILINILSISDYEWMIGEGDIDNLCQLPLNGRYVIEPILILIPCILLLFLEKNKKLRWGYVTITVMYIIWSFYLRFNFC
>NZ_CP053614.1|WP_060557305.1|695419_696232_-|phosphonoacetaldehyde-hydrolase
MNKSVEAVILDWAGTVVDFGSFAPTQIFVDAFAQAFNFKISLSEARGPMGMGKIDHIRALLNEPNIRTRWTAQFGHPPSEEEAQHIYRTFMPLQIAQVVHFAKPIEGALEAISTMRAQGIKIGSCSGYPKAVMDVLVPKAAEYGYQPDCVVASDEIAAGSRPGPWMALKNVIELGVMCVAHCVKVDDAVTGIAEGLNAGMWTVGLSVSGNEFGATFEQYQTMELAEIENRKRIAENKLRTAGAHYIIDTLANLPAVIEDINQRIANNQKP
>NZ_CP053614.1|WP_060557304.1|697106_698240_+|M20-family-metallopeptidase
MQHTINSQYDEMVDFLKELVNIDSGSYDKQGVDTVADLLIQRYEKLGFVVEVFENEQLGNNYRLVHKDATNPQIFIAAHLDTVFPKGTVAERPFSIDGSRAYGPGVIDMKASHVLTYYAINALKQSGDFSYQNVEILLNCDEEIGSKTSRHLIEKYAKNKAYALIMEPARANGAIVSARRGVGTYELLIEGKASHSGIAPEAGISAIQELSYKIQALHALSRHDEGLSVNVGLISGGTSVNTVAPHARAEIDVRISTDEQGIEIDKQVREVCSQPVLAGVKLTLKGGINRPPMVKTSESANLIDIIKQQADLIGLEIEDISTGGGSDASFTAGVGTPSVDGLGPIGGYQHSDKEYLDLPSLTERTVLFANVIKRLSQ
>NZ_CP053614.1|WP_060557303.1|698249_699656_+|YfcC-family-protein
MEKSKKIKWAMPDAFIIIFGIVILAAIATYLIPAGSYQRETVNGLNRVVPNSFNYVAQNPASLMDVFYAIPVGLKQSASIIFLIFMIGGAIAIYDRTRAIDSGINALIVKTKGNYQALIITVAFIFGMLSSLGLAANAVIAFIPIGIALSRSMKLDAITGVAVVYLGYYAGNAVGVLDPTILGTAQTLAEVPLFSGVIFRVVLFAILIVVTIAYIVWYARRIANDPTTSYMYGIAKDDPDYEQPHTQSLDSTFSLRQKLSLVVFVAFIGLFLYGAFEYKWGIEHLSAIFIMMSIVVAAMFKIAPNDYIKTFMKGAQSLVYGALVVGIARAVIVILDEGRVLDSIVQATLVPLQQTSHFWGAQLLYFFNLLFNLLVTSGTGQASIVMPIMVPILDILDLTRQTGVLILKLGDGFTNIITPTSGVLMAVLAVGKVPWTRWVKFVFPILMIWVVIGMAAIGIATAISYGPV
>NZ_CP053614.1|WP_175212411.1|699748_700387_-|TetR/AcrR-family-transcriptional-regulator-C-terminal-domain-containing-protein
MKSPKIDRLNVLDTALSLLEKEGIEGLTMRKLADALHIKAASLYWHFDNKQTLIEGMADRIVSEVALDFHYSQDWKADLKRLATELREAFLQHRDGARVFAGTYVISENVLRINNMLITLIMQSGASAELASNMSMTLLYFILGCCIEQQAITLIDSEILMQKRLAFEQIVRDKYPQTWQVREILFADDFAMRFNFGLEQLVTGFEHQLMTP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10387-10419	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72648-72680	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15133-15165	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62060-62092	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28402-28434	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25816-25848	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23240-23272	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57315-57347	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64739-64771	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95158-95190	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41349-41381	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10767-10799	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13633-13665	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10830-10862	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10767-10799	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15396-15428	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172056-172088	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68063-68095	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74789-74821	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78315-78347	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89271-89303	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152291-152323	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17850-17882	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75880-75912	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40084-40116	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42453-42485	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13464-13496	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12090-12122	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57128-57160	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42619-42651	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38153-38185	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10525-10557	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49215-49247	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140941-140973	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46467-46499	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150963-150995	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7471-7503	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116699-116731	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42620-42652	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_KX774387	Providencia rettgeri strain 30905 plasmid pC131, complete sequence	10443-10483	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_MF150120	Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence	40020-40060	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP053895	Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence	72704-72744	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_KX756453	Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence	42389-42429	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_KU963389	Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence	15189-15229	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP047288	Proteus cibarius strain G11 plasmid p152, complete sequence	62116-62156	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NC_015472	Escherichia coli plasmid pECTm80, complete sequence	13400-13440	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP044485	Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence	28458-28498	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP025853	Escherichia coli strain 510016 plasmid p510016_36, complete sequence	25872-25912	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_KT754165	Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence	23296-23336	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP013800	Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence	12026-12066	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP053372	Proteus cibarius strain G32 plasmid pG32-177, complete sequence	57371-57411	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP024247	Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2	64795-64835	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP053043	Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence	95214-95254	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	MG516911	Proteus mirabilis plasmid pPm60, complete sequence	57064-57104	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	JX469830	Uncultured bacterium plasmid pG527, complete sequence	41405-41445	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP013819	Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence	10823-10863	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP003997	Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence	42555-42595	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	CP025925	Escherichia coli strain 520873 plasmid p520873_36, complete sequence	13689-13729	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	CP025875	Escherichia coli strain 503458 plasmid p503458_37, complete sequence	10886-10926	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP013795	Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence	10823-10863	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	CP054380	Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence	38089-38129	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NC_002525	Escherichia coli K-12 plasmid R721, complete sequence	10461-10501	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP023380	Escherichia coli strain 127 plasmid p43, complete sequence	15452-15492	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP011314	Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence	172112-172152	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NC_008357	Pseudomonas aeruginosa plasmid pBS228, complete sequence	68119-68159	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP027138	Escherichia coli strain AR_0369 plasmid unnamed2	74845-74885	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP022673	Shigella sonnei strain 866 plasmid p866, complete sequence	78371-78411	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP048015	Acinetobacter towneri strain 205 plasmid pAT205, complete sequence	49151-49191	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP034054	Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence	140877-140917	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP047114	Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence	46403-46443	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP034046	Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence	150899-150939	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP045128	Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence	89327-89367	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP027700	Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence	7407-7447	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_LT985250	Escherichia coli strain 170 plasmid RCS38_p, complete sequence	152347-152387	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_MK360096	Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence	17906-17946	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP053899	Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence	116635-116675	0	1.0
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_MK264770	Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence	42556-42596	0	1.0
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052804	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence	113091-113123	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP038508	Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence	228634-228666	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052788	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence	321488-321520	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052786	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence	10079-10111	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052838	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence	13470-13502	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP051676	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence	201786-201818	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052779	Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence	212524-212556	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052832	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence	277011-277043	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73380-73412	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052806	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence	282696-282728	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052818	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence	1788-1820	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87104-87136	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052795	Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence	166287-166319	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP047882	Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence	264306-264338	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052802	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence	197576-197608	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052840	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence	9544-9576	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052836	Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence	222743-222775	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052828	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence	8856-8888	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052826	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence	292607-292639	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP016409	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence	299316-299348	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP016407	Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence	299920-299952	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP016413	Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence	295999-296031	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_CP016411	Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence	293612-293644	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	CP052814	Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence	281790-281822	2	0.939
NZ_CP053614_1	1.1\|688977\|33\|NZ_CP053614\|PILER-CR	688977-689009	33	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61314-61346	2	0.939
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_CP053897	Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence	75936-75976	2	0.951
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	MN310378	Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence	73436-73476	2	0.951
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_MH476540	Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence	87160-87200	2	0.951
NZ_CP053614_1	1.2\|689033\|41\|NZ_CP053614\|PILER-CR	689033-689073	41	NZ_MG764552	Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence	61250-61290	2	0.951

1. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

2. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

3. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

4. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

5. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

6. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

7. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

8. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

9. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

10. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

11. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

12. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

13. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

14. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

15. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

16. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

17. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

18. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

19. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

20. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

21. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

22. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

23. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

24. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

25. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

26. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

27. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

28. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

29. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

30. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

31. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

32. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

33. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

34. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

35. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

36. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

37. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

38. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

39. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgtattagcttacgacgctaca	Protospacer
*********************************

40. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_KX774387 (Providencia rettgeri strain 30905 plasmid pC131, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

41. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_MF150120 (Klebsiella pneumoniae strain A64477 plasmid pKP64477d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

42. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP053895 (Proteus mirabilis strain JPM24 plasmid pJPM24, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

43. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_KX756453 (Klebsiella pneumoniae strain 1194/11 plasmid pKP1194a, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

44. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_KU963389 (Escherichia coli strain ECO37 plasmid ECO37P1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

45. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP047288 (Proteus cibarius strain G11 plasmid p152, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

46. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NC_015472 (Escherichia coli plasmid pECTm80, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

47. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP044485 (Acinetobacter schindleri strain HZE30-1 plasmid pHZE30-1-2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

48. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP025853 (Escherichia coli strain 510016 plasmid p510016_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

49. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_KT754165 (Shigella dysenteriae 1 strain 93-531-1 plasmid p93-531-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

50. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP013800 (Piscirickettsia salmonis strain AY6532B plasmid p4PS9, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

51. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP053372 (Proteus cibarius strain G32 plasmid pG32-177, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

52. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP024247 (Escherichia coli O27:H7 strain B4103-1 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

53. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP053043 (Proteus cibarius strain HNCF44W plasmid pHNCF44W_NDM-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

54. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to MG516911 (Proteus mirabilis plasmid pPm60, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

55. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to JX469830 (Uncultured bacterium plasmid pG527, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

56. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP013819 (Piscirickettsia salmonis strain AY3800B plasmid p3PS10, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

57. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP003997 (Klebsiella pneumoniae subsp. pneumoniae Kp13 plasmid pKP13d, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

58. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to CP025925 (Escherichia coli strain 520873 plasmid p520873_36, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

59. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to CP025875 (Escherichia coli strain 503458 plasmid p503458_37, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

60. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP013795 (Piscirickettsia salmonis strain AY6297B plasmid p4PS8, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

61. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to CP054380 (Escherichia coli strain SCU-175 plasmid pSCU-175-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

62. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NC_002525 (Escherichia coli K-12 plasmid R721, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

63. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP023380 (Escherichia coli strain 127 plasmid p43, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

64. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP011314 (Klebsiella pneumoniae subsp. pneumoniae strain 234-12 plasmid pKpn23412-362, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

65. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NC_008357 (Pseudomonas aeruginosa plasmid pBS228, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

66. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP027138 (Escherichia coli strain AR_0369 plasmid unnamed2) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

67. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

68. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP048015 (Acinetobacter towneri strain 205 plasmid pAT205, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

69. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP034054 (Klebsiella pneumoniae strain KP_NORM_BLD_2015_112126 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

70. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP047114 (Proteus mirabilis strain SCBX1.1 plasmid plas1.1.2, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

71. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP034046 (Klebsiella pneumoniae strain KP_NORM_BLD_2014_104014 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

72. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP045128 (Acinetobacter indicus strain XG03 plasmid pXG03-X3, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

73. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP027700 (Klebsiella pneumoniae strain KP30835 plasmid unnamed5, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

74. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_LT985250 (Escherichia coli strain 170 plasmid RCS38_p, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

75. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_MK360096 (Salmonella enterica strain 13-SA02717 plasmid pSE13-SA02717, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

76. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP053899 (Proteus mirabilis strain YPM35 plasmid pJPM35-1, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

77. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_MK264770 (Klebsiella pneumoniae strain KP89 plasmid pKP89, complete sequence) position: , mismatch: 0, identity: 1.0

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccacccct	Protospacer
*****************************************

78. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052804 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S973 plasmid pN17S0973, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

79. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP038508 (Salmonella enterica subsp. enterica serovar Infantis strain FARPER-219 plasmid p-F219, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

80. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052788 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0611 plasmid pN19S0611, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

81. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052786 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0641 plasmid pN19S0641, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

82. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052838 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S097 plasmid pN16S097, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

83. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP051676 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1234 plasmid pN16S1234, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

84. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052779 (Salmonella enterica strain 19TN07GT06K-S plasmid pN19S1233, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

85. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052832 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1040 plasmid pN17S1040, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

86. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

87. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052806 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S816 plasmid pN17S0816, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

88. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052818 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1509 plasmid pN17S1509, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

89. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

90. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052795 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N19S0125 plasmid pN19S0125, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

91. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP047882 (Salmonella enterica subsp. enterica serovar Infantis strain 119944 plasmid pESI, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

92. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052802 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S976 plasmid pN17S0976, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

93. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052840 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S024 plasmid pN16S024, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

94. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052836 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N16S103 plasmid pN16S103, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

95. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052828 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1126 plasmid pN17S1126, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

96. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052826 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S1245 plasmid pN17S0637, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

97. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP016409 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502916 plasmid pFSIS1502916, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

98. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP016407 (Salmonella enterica subsp. enterica serovar Infantis strain FSIS1502169 plasmid pFSIS1502169, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

99. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP016413 (Salmonella enterica subsp. enterica serovar Infantis strain CVM44454 plasmid pCVM44454, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

100. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_CP016411 (Salmonella enterica subsp. enterica serovar Infantis strain N55391 plasmid pN55391, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

101. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to CP052814 (Salmonella enterica subsp. enterica serovar Infantis strain CVM N17S349 plasmid pN17S0349, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

102. spacer 1.1|688977|33|NZ_CP053614|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.939

tttttaattttcgtattagcttacgacgctaca	CRISPR spacer
tttttaattttcgcattagcttgcgacgctaca	Protospacer
*************.********.**********

103. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_CP053897 (Providencia rettgeri strain YPR31 plasmid pYPR31, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctcttccctaaataatccttaaaaactccatttccaccctc	Protospacer
***************************************..

104. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to MN310378 (Klebsiella pneumoniae strain A2293 plasmid pA2293-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

105. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_MH476540 (Klebsiella pneumoniae strain KP1276 plasmid pIA/C-KLUC, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

106. spacer 1.2|689033|41|NZ_CP053614|PILER-CR matches to NZ_MG764552 (Klebsiella pneumoniae strain A1763 plasmid pA1763-Ct2, complete sequence) position: , mismatch: 2, identity: 0.951

ctcttccctaaataatccttaaaaactccatttccacccct	CRISPR spacer
ctctcccctaaataatccttaaaaaccccatttccacccct	Protospacer
****.*********************.**************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

304791 : 314306

Klosneuvirus(14.29%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060557541.1\|304791_306009_-	aspartate aminotransferase family protein	A0A1V0SKB7	Klosneuvirus	1.0e-25	27.0
WP_004246870.1\|306126_306702_-	aminodeoxychorismate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	6.8e-68	62.1
WP_175212404.1\|306958_308167_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	1.8e-187	80.8
WP_175212405.1\|308189_308606_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	3.4e-45	62.8
WP_004246869.1\|308822_309395_-	peptidylprolyl isomerase A	A0A1B1IVS0	uncultured_Mediterranean_phage	1.8e-12	35.1
WP_060556807.1\|309669_310293_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_060556806.1\|310762_311281_+	peptide deformylase	E3SLL2	Synechococcus_phage	4.2e-16	38.0
WP_060556813.1\|311507_314306_-	DNA polymerase I	A0A218MKQ4	uncultured_virus	1.2e-72	32.7

DBSCAN-SWA_2

517695 : 526226

Cronobacter_phage(33.33%)

capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368586.1\|517695_518730_-	virulence RhuM family protein	Q9JMN3	Wolbachia_phage	2.5e-65	41.3
WP_135092165.1\|519764_519983_-	hypothetical protein	NA	NA	NA	NA
WP_167755263.1\|520513_520669_-	hypothetical protein	NA	NA	NA	NA
WP_135003225.1\|520658_520823_-	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	1.8e-05	64.5
WP_152118458.1\|521173_523876_-	DUF927 domain-containing protein	A0A1B0VP75	Pseudomonas_phage	9.0e-62	31.9
WP_152118457.1\|523872_524103_-	hypothetical protein	NA	NA	NA	NA
WP_152118459.1\|524099_524588_-	host cell division inhibitor Icd-like protein	A0A1W6JPK3	Morganella_phage	1.6e-38	62.0
WP_036918681.1\|524679_525213_-\|capsid	GPO family capsid scaffolding protein	A5X9H4	Aeromonas_virus	1.9e-32	55.7
WP_152118456.1\|525209_526226_-\|capsid	P2 family phage major capsid protein	F1BUM2	Cronobacter_phage	4.7e-80	49.3

DBSCAN-SWA_3

562234 : 626695

Escherichia_phage(26.67%)

integrase,transposase,tRNA

attL 609629:609645|attR 631301:631317

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060556649.1\|562234_563263_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_060556648.1\|563303_563978_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA
WP_004249861.1\|564095_564719_-	superoxide dismutase [Mn]	Q56AR7	Bacillus_thuringiensis_phage	6.4e-64	58.5
WP_060556647.1\|565087_567046_+	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	3.7e-89	39.1
WP_060556646.1\|567210_567522_+	DUF485 domain-containing protein	NA	NA	NA	NA
WP_060556645.1\|567518_569174_+	cation acetate symporter	NA	NA	NA	NA
WP_060556644.1\|569496_571128_+	phosphoethanolamine transferase	NA	NA	NA	NA
WP_060556643.1\|571146_571839_-	lactate utilization protein C	NA	NA	NA	NA
WP_060556642.1\|571842_573261_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA
WP_060556641.1\|573251_573989_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004249867.1\|580023_580710_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_175212410.1\|580790_582188_+	multidrug transporter subunit MdtD	NA	NA	NA	NA
WP_060556638.1\|582272_583199_-	ribokinase	NA	NA	NA	NA
WP_060556637.1\|583479_584979_+	ATPase RavA	A0A0N9PBE1	Sulfolobus_monocaudavirus	8.6e-22	37.3
WP_060556636.1\|584986_586444_+	ATPase RavA stimulator ViaA	NA	NA	NA	NA
WP_004246604.1\|586444_587437_-	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	1.3e-50	37.5
WP_004246603.1\|587597_588059_+	transcriptional regulator AsnC	NA	NA	NA	NA
WP_060556635.1\|588158_588599_+	FMN-binding protein MioC	NA	NA	NA	NA
WP_060556634.1\|588978_590877_+\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_060556633.1\|590873_591500_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_004246598.1\|592114_592492_+	F0F1 ATP synthase subunit I	NA	NA	NA	NA
WP_004246597.1\|592523_593348_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_004246596.1\|593393_593633_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA
WP_004246595.1\|593694_594165_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_004246594.1\|594177_594711_+	F0F1 ATP synthase subunit delta	NA	NA	NA	NA
WP_060556632.1\|594725_596267_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_004246591.1\|596324_597188_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_004246589.1\|597222_598605_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_004246588.1\|598626_599043_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA
WP_060556631.1\|599193_600567_+	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	9.6e-28	32.3
WP_060556630.1\|600723_602550_+	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1I9J5	Paramecium_bursaria_Chlorella_virus	2.1e-131	44.6
WP_001029679.1\|602709_603531_+	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA
WP_000267723.1\|603517_605626_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_001276994.1\|605622_607290_+	AAA family ATPase	NA	NA	NA	NA
WP_071538080.1\|608092_609667_-	PAS domain-containing methyl-accepting chemotaxis protein	A0A1B0V854	Salmonella_phage	2.8e-87	99.4
609629:609645	attL	NA	NA	NA	NA
WP_001067855.1\|609691_610396_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000052512.1\|610845_612321_+	ABC-F type ribosomal protection protein Msr(E)	A0A1B0RXA0	Streptococcus_phage	2.3e-160	59.0
WP_000155092.1\|612376_613261_+	Mph(E) family macrolide 2'-phosphotransferase	NA	NA	NA	NA
WP_121523926.1\|613450_613684_-	recombinase family protein	NA	NA	NA	NA
WP_000018329.1\|614689_615505_-	aminoglycoside O-phosphotransferase APH(3')-Ia	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	6.1e-163	100.0
WP_001067855.1\|615655_616360_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000344784.1\|616850_617711_+	TniB family NTP-binding protein	NA	NA	NA	NA
WP_000287615.1\|617761_619306_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.0e-38	34.6
WP_001324342.1\|619428_620952_+\|transposase	IS21-like element IS1326 family transposase	A0A2L1IVA1	Escherichia_phage	1.2e-15	24.2
WP_000983249.1\|620938_621724_+	ATP-binding protein	A0A2L1IVB6	Escherichia_phage	3.3e-33	35.0
WP_000376623.1\|622258_622759_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000679427.1\|623717_624065_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001749986.1\|624287_624740_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_000845054.1\|625681_626695_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
631301:631317	attR	NA	NA	NA	NA

DBSCAN-SWA_4

631352 : 688164

Escherichia_phage(26.67%)

integrase,transposase

attL 640801:640815|attR 691476:691490

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171265581.1\|631352_632057_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	5.5e-120	85.3
WP_001447541.1\|632981_633866_+	DUF3363 domain-containing protein	NA	NA	NA	NA
WP_000214122.1\|634088_635303_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.2e-18	28.7
WP_001255015.1\|635330_635636_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015344975.1\|635747_637241_+\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_172767591.1\|637271_637514_+	hypothetical protein	NA	NA	NA	NA
WP_175233693.1\|638138_638630_-	AAC(3) family N-acetyltransferase	O64018	Bacillus_phage	3.8e-27	53.0
WP_000742814.1\|638635_639661_-	aminoglycoside O-phosphotransferase APH(4)-Ia	NA	NA	NA	NA
640801:640815	attL	NA	NA	NA	NA
WP_004201164.1\|642264_643077_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|643080_643446_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|643450_644089_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201169.1\|644099_645131_-	protein-disulfide reductase DsbD N-terminal domain-containing protein	NA	NA	NA	NA
WP_004201171.1\|645135_645465_-	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201172.1\|645658_645949_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201176.1\|646004_647645_+	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_015056391.1\|649572_649857_-	hypothetical protein	NA	NA	NA	NA
WP_000376616.1\|652786_652990_-	hypothetical protein	NA	NA	NA	NA
WP_000259031.1\|653117_653957_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA
WP_000679427.1\|653950_654298_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001749986.1\|654520_654973_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA
WP_063840321.1\|655069_655624_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA
WP_000845054.1\|655915_656929_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	6.1e-72	45.5
WP_000454193.1\|657131_657482_+	DUF3330 domain-containing protein	NA	NA	NA	NA
WP_000147567.1\|657607_658168_+	recombinase family protein	A0A1B0V7I5	Salmonella_phage	4.0e-49	86.2
WP_001067784.1\|661588_662293_-\|transposase	IS6-like element IS1006 family transposase	A0A077SL39	Escherichia_phage	1.9e-120	85.8
WP_175233679.1\|664439_665537_+	chloramphenicol/florfenicol efflux MFS transporter FloR	S4TR35	Salmonella_phage	1.4e-16	29.3
WP_001255015.1\|665564_665870_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_172767591.1\|667500_667743_+	hypothetical protein	NA	NA	NA	NA
WP_172767592.1\|667690_668446_+\|transposase	IS6 family transposase	A0A077SL39	Escherichia_phage	2.4e-41	44.7
WP_001442844.1\|668867_669350_-	phosphotransferase	NA	NA	NA	NA
WP_175233680.1\|669354_669891_-	hypothetical protein	NA	NA	NA	NA
WP_001199192.1\|670119_670896_-	aminoglycoside N-acetyltransferase AAC(3)-IVa	NA	NA	NA	NA
WP_004201164.1\|672490_673303_+	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_004201167.1\|673306_673672_+	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201168.1\|673676_674315_+	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201172.1\|675883_676174_+	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_015056391.1\|679789_680074_-	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|680834_681539_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000184001.1\|681644_682850_-	chromate efflux transporter	NA	NA	NA	NA
WP_000376616.1\|683005_683209_-	hypothetical protein	NA	NA	NA	NA
WP_000679427.1\|684166_684514_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_001206316.1\|684677_685469_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000777554.1\|685485_685959_-	trimethoprim-resistant dihydrofolate reductase DfrA1	A0A140HLG8	Bacillus_phage	1.6e-19	34.4
WP_070342364.1\|685955_686801_-	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA
WP_000071896.1\|687186_687723_+\|integrase	class 2 integron integrase IntI2	A0A1P8DJJ6	Virus_Rctr41k	6.9e-14	34.4
WP_000497519.1\|687837_688164_+\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	2.1e-18	52.0
691476:691490	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1825723 : 1834253

Mycobacterium_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060556952.1\|1825723_1826923_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	1.3e-28	38.1
WP_060556953.1\|1827532_1828501_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	2.4e-134	71.3
WP_072196779.1\|1828526_1830653_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	1.2e-205	51.3
WP_060556954.1\|1830681_1831086_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	2.8e-12	38.5
WP_004246071.1\|1831097_1831322_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_060556955.1\|1831603_1832077_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|1832274_1832484_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246061.1\|1832787_1833276_-	hypothetical protein	NA	NA	NA	NA
WP_004246058.1\|1833878_1834253_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0

DBSCAN-SWA_6

2044818 : 2123367

Bacillus_phage(17.65%)

protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060557068.1\|2044818_2045133_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.2e-13	44.1
WP_060557069.1\|2045163_2047458_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.0e-170	42.9
WP_004244560.1\|2047577_2047796_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_060557070.1\|2048115_2048808_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_060557071.1\|2048809_2050561_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	2.3e-18	31.2
WP_060557072.1\|2050563_2052333_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	1.7e-21	23.9
WP_060557073.1\|2052474_2053434_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	1.5e-64	45.8
WP_004244566.1\|2053976_2054471_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_175233682.1\|2054598_2058420_+	DNA translocase FtsK 4TM domain-containing protein	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_175212431.1\|2058532_2059138_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_060557161.1\|2059148_2060498_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	6.9e-79	40.3
WP_060557076.1\|2060630_2061920_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	9.2e-97	46.0
WP_081045311.1\|2062101_2062434_-	hypothetical protein	NA	NA	NA	NA
WP_060557077.1\|2062834_2063884_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_060557078.1\|2063956_2064853_-	hypothetical protein	NA	NA	NA	NA
WP_060557079.1\|2065213_2065954_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	1.4e-20	27.4
WP_060557080.1\|2066061_2068344_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	7.9e-160	41.8
WP_004244577.1\|2068398_2069253_-	formate transporter FocA	NA	NA	NA	NA
WP_060557081.1\|2069923_2071681_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_060557082.1\|2071908_2072946_+	L-asparaginase 2	NA	NA	NA	NA
WP_060557083.1\|2073021_2074287_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_060557084.1\|2074421_2075855_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.5e-07	24.7
WP_060557085.1\|2075991_2077080_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	4.4e-84	47.0
WP_060557086.1\|2077276_2078563_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244585.1\|2078851_2079529_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|2079710_2081384_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|2081448_2081736_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_060557087.1\|2082153_2084523_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	1.9e-23	31.6
WP_004244589.1\|2084559_2086305_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_060557088.1\|2086301_2087303_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|2087799_2088015_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|2088429_2088609_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|2088613_2089375_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_175212432.1\|2089483_2090329_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244596.1\|2090708_2091482_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|2091491_2092814_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_060557090.1\|2092794_2093523_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_060557091.1\|2093519_2097977_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_060557092.1\|2098278_2098932_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-99	78.3
WP_004247637.1\|2099354_2100068_+	acid phosphatase AphA	NA	NA	NA	NA
WP_060557093.1\|2100403_2102119_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|2102451_2103000_+	YcbK family protein	NA	NA	NA	NA
WP_049208325.1\|2103043_2103694_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|2103786_2104260_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_060557094.1\|2104350_2106087_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_060557095.1\|2106079_2107435_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_060557096.1\|2107472_2111021_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_060557097.1\|2111023_2112487_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_060557098.1\|2112492_2113143_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|2113144_2113933_-	hypothetical protein	NA	NA	NA	NA
WP_060557099.1\|2113936_2116648_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	9.0e-86	30.8
WP_060557100.1\|2116656_2117412_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_060557101.1\|2117404_2118763_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|2118764_2119316_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_060557163.1\|2119317_2120586_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_060557102.1\|2120590_2121628_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_060557103.1\|2121591_2123367_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_7

2203092 : 2245276

Burkholderia_phage(21.95%)

integrase,terminase,lysis,plate,head

attL 2203898:2203922|attR 2227310:2227334

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247034.1\|2203092_2203506_-	type II toxin-antitoxin system HicB family antitoxin	A0A0D4DCG1	Acinetobacter_phage	1.4e-19	40.3
WP_060557166.1\|2203552_2203738_-	type II toxin-antitoxin system HicA family toxin	A0A0D4DC32	Acinetobacter_phage	8.4e-12	54.2
2203898:2203922	attL	NA	NA	NA	NA
WP_060557150.1\|2204580_2206167_+	hypothetical protein	P79669	Escherichia_phage	3.8e-278	88.3
WP_060557151.1\|2206404_2207580_-\|integrase	site-specific integrase	A0A2D1GN00	Marinobacter_phage	5.5e-32	32.2
WP_020945460.1\|2207581_2207794_-	hypothetical protein	NA	NA	NA	NA
WP_170936158.1\|2208038_2208209_-	hypothetical protein	NA	NA	NA	NA
WP_020945461.1\|2208208_2208379_-	hypothetical protein	NA	NA	NA	NA
WP_004250516.1\|2208406_2208586_-	hypothetical protein	NA	NA	NA	NA
WP_020945462.1\|2208633_2209134_-	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	3.6e-41	57.0
WP_087740825.1\|2209133_2211101_-	hypothetical protein	H9C157	Pectobacterium_phage	6.4e-118	39.5
WP_004250523.1\|2211113_2211374_-	hypothetical protein	A0A1B1W282	Salmonella_phage	7.9e-08	45.3
WP_004250525.1\|2211373_2211706_-	hypothetical protein	H9C158	Pectobacterium_phage	1.6e-05	39.2
WP_060556278.1\|2211963_2212164_+	hypothetical protein	NA	NA	NA	NA
WP_060556279.1\|2212160_2212541_-	hypothetical protein	NA	NA	NA	NA
WP_087740824.1\|2212891_2213584_-	helix-turn-helix transcriptional regulator	G8C7L8	Escherichia_phage	2.4e-51	48.8
WP_049219173.1\|2213690_2213936_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_020945464.1\|2213984_2214440_+	hypothetical protein	H9C162	Pectobacterium_phage	9.9e-30	55.4
WP_004250533.1\|2214457_2214682_+	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_036895394.1\|2214683_2215535_+	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	8.0e-33	60.4
WP_036895392.1\|2215527_2216121_+	ATP-binding protein	K7PLU3	Enterobacteria_phage	1.1e-44	47.6
WP_175212434.1\|2216113_2217487_+	replicative DNA helicase	A0A192Y673	Salmonella_phage	1.9e-100	45.4
WP_060556541.1\|2217635_2219045_-	hypothetical protein	NA	NA	NA	NA
WP_060556540.1\|2219152_2219746_+	DUF1367 family protein	K7PKS6	Enterobacteria_phage	5.6e-57	54.2
WP_060556640.1\|2219757_2220069_+	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	1.3e-33	68.8
WP_087740823.1\|2220103_2220652_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	8.2e-31	44.9
WP_175212380.1\|2220779_2221100_+	hypothetical protein	NA	NA	NA	NA
WP_004250554.1\|2221234_2221432_+	hypothetical protein	Q9MC00	Enterobacteria_phage	1.1e-09	65.4
WP_155195676.1\|2221574_2222621_+	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	2.4e-143	71.4
WP_004250558.1\|2222889_2223159_+	hypothetical protein	A0A2H4FNF0	Salmonella_phage	3.3e-17	47.8
WP_060557316.1\|2223158_2223629_+	lysozyme	A0A1W6JNW4	Morganella_phage	8.9e-50	59.2
WP_162837620.1\|2223610_2223769_+	hypothetical protein	NA	NA	NA	NA
WP_060557317.1\|2223771_2224239_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	6.0e-22	48.0
WP_060557318.1\|2224269_2224506_-	hypothetical protein	NA	NA	NA	NA
WP_087740821.1\|2224639_2225668_+\|terminase	terminase small subunit	C5IHM0	Burkholderia_virus	1.1e-36	38.6
WP_060556612.1\|2225856_2227254_+\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	5.6e-84	40.3
WP_087740820.1\|2227258_2228761_+	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	2.1e-100	42.6
2227310:2227334	attR	NA	NA	NA	NA
WP_087741162.1\|2228798_2229512_+\|head	phage head morphogenesis protein	A0A2H5BG15	Pseudoalteromonas_phage	1.4e-33	35.7
WP_087740819.1\|2229508_2230768_+	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	1.6e-45	51.3
WP_036908136.1\|2230767_2231265_+	hypothetical protein	NA	NA	NA	NA
WP_087740818.1\|2231264_2232332_+	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	8.8e-53	39.3
WP_060556539.1\|2232401_2232743_+	hypothetical protein	Q6IWU7	Burkholderia_phage	1.2e-08	35.5
WP_080047799.1\|2232745_2233177_+	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	3.3e-11	32.4
WP_004250581.1\|2233176_2233635_+	hypothetical protein	Q6IWU9	Burkholderia_phage	3.2e-12	37.6
WP_004250582.1\|2233634_2234006_+	hypothetical protein	NA	NA	NA	NA
WP_060557411.1\|2233992_2234508_+	hypothetical protein	NA	NA	NA	NA
WP_087740817.1\|2234516_2236004_+	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	6.6e-83	38.1
WP_004250586.1\|2236014_2236467_+	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_004250588.1\|2236507_2236966_+	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_087740816.1\|2237049_2239401_+	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	2.6e-17	28.8
WP_087740815.1\|2239402_2239930_+	hypothetical protein	NA	NA	NA	NA
WP_020945489.1\|2239929_2240247_+	hypothetical protein	Q6IWP9	Burkholderia_phage	3.3e-08	32.3
WP_087740814.1\|2240212_2241028_+	hypothetical protein	A1Z005	Burkholderia_virus	1.1e-10	26.3
WP_175212435.1\|2241030_2241723_+	hypothetical protein	A1Z003	Burkholderia_virus	9.1e-35	39.4
WP_004250600.1\|2241719_2242064_+	hypothetical protein	NA	NA	NA	NA
WP_087740813.1\|2242056_2243244_+\|plate	baseplate J/gp47 family protein	Q6IWQ3	Burkholderia_phage	1.1e-69	40.3
WP_004250603.1\|2243240_2243897_+	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	7.5e-39	40.3
WP_087740812.1\|2243902_2245276_+	hypothetical protein	Q6IWQ6	Burkholderia_phage	2.2e-16	38.0

DBSCAN-SWA_8

2322714 : 2360177

Morganella_phage(25.81%)

integrase,terminase,portal,lysis,tail,tRNA,protease,capsid,head

attL 2322371:2322389|attR 2343824:2343842

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2322371:2322389	attL	NA	NA	NA	NA
WP_060556849.1\|2322714_2323818_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|2323923_2324376_-	NUDIX hydrolase	NA	NA	NA	NA
WP_060556848.1\|2324368_2324998_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004251822.1\|2325136_2326390_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.8e-20	90.7
WP_104836382.1\|2326499_2327633_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z04	Phage_21	1.4e-154	72.2
WP_087803552.1\|2327607_2327859_-	excisionase	NA	NA	NA	NA
WP_049219749.1\|2327944_2328469_-	hypothetical protein	A0A1W6JP41	Morganella_phage	2.3e-54	61.0
WP_175212437.1\|2328614_2328758_-	hypothetical protein	NA	NA	NA	NA
WP_081353450.1\|2328990_2329422_-	hypothetical protein	NA	NA	NA	NA
WP_071233779.1\|2329411_2331286_-	DEAD/DEAH box helicase family protein	A0A2I5ARD8	Synechococcus_phage	5.4e-13	26.7
WP_103004815.1\|2331382_2332039_-	helix-turn-helix transcriptional regulator	A0A1W6JNY2	Morganella_phage	1.3e-86	73.5
WP_103004814.1\|2332134_2332362_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	7.9e-12	50.0
WP_104836383.1\|2332400_2332877_+	hypothetical protein	A0A1W6JP72	Morganella_phage	1.8e-45	60.4
WP_017628377.1\|2333138_2333318_+	DUF4222 domain-containing protein	A0A1W6JP38	Morganella_phage	3.4e-10	55.2
WP_104836862.1\|2333875_2334391_+	hypothetical protein	U5P0A0	Shigella_phage	3.5e-23	44.2
WP_098943240.1\|2334412_2335219_+	KilA-N domain-containing protein	A0A1W6JP13	Morganella_phage	4.0e-90	62.1
WP_115370361.1\|2335215_2336241_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	1.9e-84	46.8
WP_104836385.1\|2336268_2336667_+	antitermination protein	Q8W638	Enterobacteria_phage	1.6e-31	53.5
WP_004244726.1\|2337007_2337220_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	3.1e-26	81.4
WP_104836386.1\|2337551_2338010_+	Hsp20 family protein	NA	NA	NA	NA
WP_104836387.1\|2338622_2340176_+	SIR2 family protein	A0A1S5SA14	Streptococcus_phage	2.4e-19	26.4
WP_175212448.1\|2341084_2341297_+	hypothetical protein	NA	NA	NA	NA
WP_104836388.1\|2341777_2342200_+	hypothetical protein	NA	NA	NA	NA
WP_046334538.1\|2342265_2342535_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	2.7e-19	53.5
WP_104836389.1\|2342534_2343005_+	lysozyme	A0A1W6JNW4	Morganella_phage	8.9e-50	61.8
WP_104836390.1\|2343147_2343609_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.8e-24	47.2
WP_036937625.1\|2343881_2344085_-	KTSC domain-containing protein	NA	NA	NA	NA
2343824:2343842	attR	NA	NA	NA	NA
WP_036937622.1\|2344911_2345424_+	KilA-N domain-containing protein	A0A1V0E5P7	Salmonella_phage	1.9e-58	65.7
WP_036976739.1\|2345505_2345913_+	hypothetical protein	NA	NA	NA	NA
WP_036937620.1\|2345909_2346248_+	HNH endonuclease	F1C587	Cronobacter_phage	8.3e-42	68.8
WP_017628364.1\|2346365_2346833_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.6e-43	59.7
WP_017628363.1\|2346786_2348520_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	3.1e-148	46.6
WP_017628362.1\|2348519_2349788_+\|portal	phage portal protein	Q77W97	Enterobacteria_phage	1.8e-201	80.4
WP_004242476.1\|2349805_2350474_+\|head,protease	HK97 family phage prohead protease	K7PM91	Enterobacterial_phage	6.6e-83	65.8
WP_017628361.1\|2350477_2351644_+\|capsid	phage major capsid protein	F1C582	Cronobacter_phage	1.6e-169	79.5
WP_017628360.1\|2351682_2351982_+\|head,tail	phage head-tail connector protein	K7PKV5	Enterobacterial_phage	5.7e-34	65.3
WP_017628359.1\|2351981_2352311_+\|head	phage head closure protein	NA	NA	NA	NA
WP_017628358.1\|2352300_2352774_+	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	8.2e-11	30.2
WP_017628357.1\|2352779_2353121_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_017628356.1\|2353130_2353796_+	hypothetical protein	NA	NA	NA	NA
WP_017628355.1\|2353860_2354277_+	hypothetical protein	NA	NA	NA	NA
WP_017628354.1\|2354273_2354552_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_004242485.1\|2354576_2354768_-	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA
WP_017628353.1\|2354894_2358170_+\|tail	phage tail tape measure protein	B7SE05	Pseudomonas_virus	2.9e-54	46.7
WP_017628352.1\|2358170_2358767_+	hypothetical protein	S4TSP7	Salmonella_phage	1.6e-51	52.3
WP_017628351.1\|2358766_2359348_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	8.1e-53	50.5
WP_049219722.1\|2359364_2359700_+	hypothetical protein	Q775B6	Bordetella_phage	3.7e-10	35.3
WP_049219720.1\|2359778_2360177_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	7.1e-32	46.2

DBSCAN-SWA_9

2605938 : 2615953

Escherichia_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060559196.1\|2605938_2607996_-	potassium-transporting ATPase subunit KdpB	E4ZFI9	Streptococcus_phage	5.7e-32	26.7
WP_060559194.1\|2608007_2609708_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA
WP_060559192.1\|2610051_2610738_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA
WP_060559190.1\|2610737_2611199_+	nucleoside deaminase	S4VYZ2	Pandoravirus	5.3e-15	35.3
WP_060559188.1\|2611266_2611878_-	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	7.3e-28	38.3
WP_060559186.1\|2612017_2612878_-	dimethyl sulfoxide reductase anchor subunit family protein	A0A077SK59	Escherichia_phage	3.7e-25	35.9
WP_004242892.1\|2612879_2613497_-	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	2.2e-72	58.6
WP_060559184.1\|2613508_2615953_-	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	1.9e-220	50.5

DBSCAN-SWA_10

3126107 : 3145030

Escherichia_phage(28.57%)

holin,plate,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_114078355.1\|3126107_3128546_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	1.0e-261	54.6
WP_004243609.1\|3128557_3129175_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_060558511.1\|3129178_3129955_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	1.1e-41	39.4
WP_060558509.1\|3130071_3130614_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	3.2e-19	34.2
WP_017628013.1\|3131179_3131359_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_060558505.1\|3132794_3133451_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	1.3e-35	40.4
WP_175212387.1\|3133447_3134635_-\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.4
WP_060558501.1\|3134627_3134972_-	hypothetical protein	NA	NA	NA	NA
WP_060558493.1\|3134968_3135661_-	hypothetical protein	A1Z003	Burkholderia_virus	2.7e-34	37.1
WP_060558491.1\|3135663_3136476_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	3.1e-42	39.6
WP_060558490.1\|3136444_3136765_-	hypothetical protein	NA	NA	NA	NA
WP_060558488.1\|3136777_3137266_-	hypothetical protein	NA	NA	NA	NA
WP_060558486.1\|3137268_3139572_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	1.0e-18	24.9
WP_060558484.1\|3139654_3140113_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.1e-25	48.5
WP_060554762.1\|3140172_3140625_-	hypothetical protein	NA	NA	NA	NA
WP_060558476.1\|3140635_3142123_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.4e-77	35.5
WP_004248364.1\|3142131_3142644_-	hypothetical protein	NA	NA	NA	NA
WP_060558474.1\|3142680_3143130_-\|lysis	lysis protein	NA	NA	NA	NA
WP_060558473.1\|3143126_3143531_-	hypothetical protein	A0A0A0RQM4	Escherichia_phage	1.7e-25	48.6
WP_060558471.1\|3143533_3143833_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	5.0e-22	51.0
WP_060558469.1\|3144214_3145030_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.7e-54	43.4

DBSCAN-SWA_11

3644334 : 3678708

Cronobacter_phage(23.08%)

capsid,terminase,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_124725226.1\|3644334_3645579_-	hypothetical protein	A0A291AXF7	Shigella_phage	1.5e-43	54.8
WP_060556902.1\|3645636_3648105_-\|tail	phage tail protein	F1C5A7	Cronobacter_phage	1.2e-251	51.8
WP_060556903.1\|3648091_3648484_-	C40 family peptidase	F1C5F2	Cronobacter_phage	1.4e-43	57.9
WP_060556904.1\|3648480_3648951_-	DUF1833 family protein	F1C5F1	Cronobacter_phage	2.6e-41	51.3
WP_060556905.1\|3648950_3649427_-	hypothetical protein	F1C5F0	Cronobacter_phage	9.6e-60	71.6
WP_155195932.1\|3649430_3652607_-	hypothetical protein	A0A1W6JNU2	Morganella_phage	1.4e-82	39.9
WP_060556273.1\|3652674_3653397_-	hypothetical protein	NA	NA	NA	NA
WP_155195948.1\|3653519_3654272_-	Rha family transcriptional regulator	A0A2I7RX10	Vibrio_phage	6.4e-42	42.8
WP_155195934.1\|3655030_3655201_-	hypothetical protein	NA	NA	NA	NA
WP_172767708.1\|3655298_3655622_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_060556627.1\|3655694_3656387_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	1.2e-90	71.9
WP_060556626.1\|3656436_3657192_-	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	1.8e-92	68.5
WP_060556625.1\|3657265_3657634_-	hypothetical protein	F1C5E4	Cronobacter_phage	1.1e-10	30.3
WP_049257616.1\|3657630_3657999_-	hypothetical protein	F1C5E3	Cronobacter_phage	1.2e-41	68.9
WP_060556624.1\|3658000_3658339_-	hypothetical protein	A0A1W6JNW7	Morganella_phage	3.2e-25	53.4
WP_060556623.1\|3658338_3658737_-	hypothetical protein	I6S619	Salmonella_phage	2.5e-53	76.5
WP_060556622.1\|3658793_3658967_-	hypothetical protein	Q5G8X9	Enterobacteria_phage	1.2e-07	50.0
WP_060556621.1\|3658976_3660071_-	hypothetical protein	G0ZND9	Cronobacter_phage	1.5e-145	68.6
WP_060556620.1\|3660083_3660533_-	hypothetical protein	I6S1Q2	Salmonella_phage	2.2e-45	67.8
WP_060556619.1\|3660532_3661807_-	hypothetical protein	G0ZND7	Cronobacter_phage	9.5e-155	64.2
WP_060556618.1\|3661810_3662740_-\|capsid	minor capsid protein	A0A1V0E5Q2	Salmonella_phage	1.0e-89	56.0
WP_060556617.1\|3662690_3664046_-	DUF1073 domain-containing protein	H6WRT0	Salmonella_phage	5.0e-162	63.7
WP_060556616.1\|3664045_3665296_-\|terminase	terminase	A0A1V0E5Q3	Salmonella_phage	1.0e-201	78.4
WP_060556615.1\|3665279_3665705_-	hypothetical protein	A0A068CGC1	Acinetobacter_phage	1.1e-33	63.6
WP_124725282.1\|3665721_3665907_-	hypothetical protein	A0A1W6JNV6	Morganella_phage	1.5e-21	75.4
WP_036905461.1\|3665937_3666297_-	hypothetical protein	NA	NA	NA	NA
WP_036905457.1\|3666277_3667060_-	KilA-N domain-containing protein	K7PH51	Enterobacterial_phage	4.2e-52	43.4
WP_081045303.1\|3667498_3667753_-	peptidase	NA	NA	NA	NA
WP_060556604.1\|3667640_3668042_-	hypothetical protein	A0A1P8DTG0	Proteus_phage	1.1e-08	43.9
WP_060556605.1\|3668038_3668443_-	structural protein	A0A2I7RXE2	Vibrio_phage	1.2e-26	50.8
WP_036970165.1\|3668435_3668723_-\|holin	phage holin family protein	NA	NA	NA	NA
WP_004916901.1\|3668719_3669109_-	membrane protein	S4TRS4	Salmonella_phage	4.2e-13	35.0
WP_060556606.1\|3669243_3670011_-	KilA-N domain-containing protein	G9BW66	Planktothrix_phage	1.5e-17	34.3
WP_060556907.1\|3670487_3671327_-	antitermination protein	H6WRZ1	Salmonella_phage	5.3e-61	45.6
WP_060556908.1\|3671323_3671524_-	NinH	A5VW84	Enterobacteria_phage	1.6e-08	50.0
WP_060556909.1\|3671513_3672107_-	recombination protein NinG	A0A1P8DTE0	Proteus_phage	2.0e-94	92.9
WP_060556914.1\|3672218_3672443_-	DUF3310 domain-containing protein	A0A0A6Z5B6	Enterobacter_phage	6.1e-25	75.4
WP_155195940.1\|3672448_3672895_-	recombination protein NinB	A0A1W6JNZ4	Morganella_phage	6.3e-37	57.3
WP_131728024.1\|3673305_3673533_-	hypothetical protein	NA	NA	NA	NA
WP_060556611.1\|3673529_3673754_-	DUF551 domain-containing protein	NA	NA	NA	NA
WP_152964332.1\|3673804_3673972_-	hypothetical protein	NA	NA	NA	NA
WP_060556819.1\|3673991_3674903_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	2.2e-97	60.9
WP_060556820.1\|3674913_3675600_-	DNA replication protein	A0A1P8DTF3	Proteus_phage	4.7e-108	87.7
WP_060556821.1\|3675596_3676535_-	replication protein	A0A1P8DTG2	Proteus_phage	9.3e-83	53.2
WP_060556822.1\|3676531_3677227_-	phage antirepressor KilAC domain-containing protein	G0ZND1	Cronobacter_phage	1.2e-82	71.3
WP_060556823.1\|3677248_3677581_-	transcriptional regulator	A0A1P8DTF0	Proteus_phage	5.1e-52	97.3
WP_036895075.1\|3677716_3677902_-	hypothetical protein	A4KWW0	Enterobacteria_phage	2.3e-09	58.3
WP_060556824.1\|3677997_3678708_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	7.3e-80	61.7

DBSCAN-SWA_12

3682169 : 3689180

Salmonella_phage(25.0%)

integrase

attL 3681520:3681535|attR 3697947:3697962

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3681520:3681535	attL	NA	NA	NA	NA
WP_060558095.1\|3682169_3682847_+	exodeoxyribonuclease X	A0A1W5PTR6	Pseudoalteromonas_phage	3.6e-20	31.8
WP_060558093.1\|3682839_3683457_+	ERF family protein	A0A1W6JP21	Morganella_phage	1.7e-72	69.8
WP_060558092.1\|3683456_3683987_+	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	2.5e-56	61.4
WP_049210558.1\|3684037_3684256_+	hypothetical protein	NA	NA	NA	NA
WP_060558090.1\|3684286_3684574_+	hypothetical protein	A0A1B0UY37	Roseobacter_phage	5.3e-13	41.9
WP_060558088.1\|3684573_3684843_+	hypothetical protein	A0A1U9ZAB3	Proteus_phage	9.0e-07	40.9
WP_049211072.1\|3684835_3685081_+	hypothetical protein	NA	NA	NA	NA
WP_060558087.1\|3685239_3685605_+	DUF2528 family protein	NA	NA	NA	NA
WP_060558086.1\|3685608_3685836_+	hypothetical protein	NA	NA	NA	NA
WP_060558085.1\|3685822_3686425_+	DNA methyltransferase	A0A248SKY3	Klebsiella_phage	1.5e-54	52.0
WP_060558083.1\|3686860_3688018_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	5.2e-176	74.9
WP_060554830.1\|3688307_3689180_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	5.7e-34	36.8
3697947:3697962	attR	NA	NA	NA	NA

DBSCAN-SWA_13

3885253 : 3996866

107

Cronobacter_phage(44.23%)

portal,terminase,integrase,tail,tRNA,holin,protease,capsid,plate,head

attL 3918867:3918883|attR 3968309:3968325

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_060557654.1\|3885253_3885907_+\|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA	NA	NA	NA
WP_060557653.1\|3886151_3886952_-	co-chaperone DjlA	NA	NA	NA	NA
WP_060557652.1\|3887377_3889744_+	LPS assembly protein LptD	NA	NA	NA	NA
WP_072196800.1\|3889791_3891129_+	peptidylprolyl isomerase SurA	NA	NA	NA	NA
WP_060557650.1\|3891118_3892120_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_004245541.1\|3892112_3892931_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_004245543.1\|3892960_3893338_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_060557649.1\|3893340_3894162_+	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH	A0A2R4ALY4	Aeromonas_phage	9.5e-07	45.6
WP_060557648.1\|3894537_3895023_-	type 3 dihydrofolate reductase	A0A1I9S5V6	Bacillus_phage	1.1e-31	43.8
WP_060557647.1\|3895711_3896893_-	hypothetical protein	NA	NA	NA	NA
WP_060557646.1\|3896999_3900257_-	autotransporter Pta	NA	NA	NA	NA
WP_060557645.1\|3900717_3902139_-	cell division protein FtsP	NA	NA	NA	NA
WP_060557644.1\|3902493_3903243_-	1-acylglycerol-3-phosphate O-acyltransferase	NA	NA	NA	NA
WP_060557643.1\|3903307_3906265_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	1.9e-81	28.9
WP_060557642.1\|3906298_3908194_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	2.3e-96	36.1
WP_060557641.1\|3908301_3908892_-	esterase YqiA	NA	NA	NA	NA
WP_060557640.1\|3908895_3909735_-	3',5'-cyclic-AMP phosphodiesterase	NA	NA	NA	NA
WP_060557639.1\|3909966_3910596_-	ADP-ribose diphosphatase	A0A1S6L1P8	Vibrio_phage	5.6e-23	36.6
WP_060557638.1\|3910809_3912207_+	outer membrane channel protein TolC	NA	NA	NA	NA
WP_004249472.1\|3912532_3913261_+	DUF1190 family protein	A0A060ACJ9	Cronobacter_phage	2.0e-24	36.1
WP_060557637.1\|3913268_3914432_+	glutathionylspermidine synthase family protein	B2ZXR7	Ralstonia_phage	3.7e-89	44.8
WP_060557636.1\|3914685_3915471_-	4,5-DOPA dioxygenase extradiol	NA	NA	NA	NA
WP_004245565.1\|3915646_3916300_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	2.3e-43	44.0
WP_060557635.1\|3916785_3917094_+	accessory factor UbiK family protein	NA	NA	NA	NA
WP_036905068.1\|3917404_3918829_-	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	A0A1B1IUK5	uncultured_Mediterranean_phage	5.1e-40	29.2
3918867:3918883	attL	NA	NA	NA	NA
WP_060557634.1\|3918929_3921764_-	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA
WP_060557633.1\|3921788_3922712_-	CYTH domain-containing protein	NA	NA	NA	NA
WP_060557632.1\|3922931_3923552_+	SH3 domain-containing protein	NA	NA	NA	NA
WP_060557631.1\|3923579_3924803_+	multifunctional CCA addition/repair protein	A0A0F6YPT7	Sinorhizobium_phage	3.8e-92	46.4
WP_004245575.1\|3924828_3925179_-	bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA	NA	NA	NA
WP_004245577.1\|3925283_3925940_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_060557630.1\|3926311_3927010_+	RraA family protein	NA	NA	NA	NA
WP_060557629.1\|3927029_3927554_+	hypothetical protein	NA	NA	NA	NA
WP_004245582.1\|3927624_3928023_+	cupin domain-containing protein	NA	NA	NA	NA
WP_060557628.1\|3928081_3929488_+	3-deoxy-7-phosphoheptulonate synthase	NA	NA	NA	NA
WP_060557627.1\|3929553_3930582_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	4.6e-107	58.6
WP_001144069.1\|3930924_3931140_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_060557626.1\|3931253_3933002_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	2.3e-74	38.1
WP_004245586.1\|3933192_3935049_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.6e-33	32.2
WP_175233683.1\|3935786_3936167_+	hypothetical protein	NA	NA	NA	NA
WP_175233684.1\|3936223_3936424_+	hypothetical protein	NA	NA	NA	NA
WP_175233685.1\|3936923_3938570_-	hypothetical protein	F1BUJ7	Cronobacter_phage	6.5e-148	55.2
WP_060557704.1\|3938556_3939117_-	hypothetical protein	F1BUJ9	Cronobacter_phage	6.2e-42	52.2
WP_060557620.1\|3939127_3939850_-	hypothetical protein	F1BUK1	Cronobacter_phage	1.9e-35	32.3
WP_175233686.1\|3939846_3941763_-\|tail	phage tail protein	F1BUK3	Cronobacter_phage	3.7e-110	61.3
WP_049212312.1\|3941766_3942324_-	protein phage	F1BUK5	Cronobacter_phage	2.8e-66	64.1
WP_175233687.1\|3942316_3943501_-\|plate	baseplate J/gp47 family protein	F1BUK6	Cronobacter_phage	2.7e-151	65.8
WP_060557617.1\|3943490_3943826_-	DUF2590 family protein	F1BUK8	Cronobacter_phage	5.4e-33	69.0
WP_175233688.1\|3943836_3946353_-\|tail	phage tail tape measure protein	F1BUK9	Cronobacter_phage	2.3e-128	44.6
WP_165544879.1\|3946352_3946496_-	hypothetical protein	A5X9I8	Aeromonas_virus	3.9e-09	60.9
WP_049220759.1\|3946540_3946810_-\|tail	putative phage tail assembly chaperone	A5X9I7	Aeromonas_virus	2.8e-16	48.2
WP_175233689.1\|3946918_3947293_-	hypothetical protein	F1BUL2	Cronobacter_phage	2.8e-22	52.3
WP_060557615.1\|3947292_3947625_-	M15 family metallopeptidase	F1BUL3	Cronobacter_phage	4.7e-37	73.3
WP_036907276.1\|3947621_3947915_-\|holin	phage holin family protein	S4TP56	Salmonella_phage	1.1e-16	51.2
WP_036907273.1\|3947929_3948382_-	DUF2597 family protein	F1BUL4	Cronobacter_phage	1.2e-48	62.6
WP_060557614.1\|3948381_3949500_-	DUF2586 family protein	F1BUL5	Cronobacter_phage	1.8e-133	64.9
WP_175233690.1\|3949515_3950214_-	hypothetical protein	F1BUL6	Cronobacter_phage	8.0e-63	58.9
WP_060557611.1\|3950210_3950699_-\|tail	phage tail protein	Q94MZ1	Haemophilus_virus	1.6e-06	26.6
WP_036907264.1\|3950695_3951148_-\|head	head completion/stabilization protein	F1BUL8	Cronobacter_phage	2.4e-36	53.3
WP_175233691.1\|3951482_3952187_-\|terminase	terminase	F1BUM0	Cronobacter_phage	6.6e-65	53.5
WP_060557607.1\|3952186_3953218_-\|capsid	phage major capsid protein, P2 family	F1BUM2	Cronobacter_phage	2.9e-138	73.2
WP_060557606.1\|3953244_3954039_-\|capsid	GPO family capsid scaffolding protein	F1BUM4	Cronobacter_phage	9.8e-33	38.8
WP_060557703.1\|3954204_3955995_+\|terminase	terminase	F1BUM5	Cronobacter_phage	2.0e-222	65.4
WP_060557605.1\|3955995_3957021_+\|portal	phage portal protein	F1BUM7	Cronobacter_phage	6.1e-128	63.1
WP_036907246.1\|3957017_3957326_+	ogr/Delta-like zinc finger family protein	F1BUM8	Cronobacter_phage	2.1e-28	60.4
WP_036907243.1\|3957327_3957510_-	hypothetical protein	NA	NA	NA	NA
WP_131728034.1\|3957601_3958093_-	hypothetical protein	NA	NA	NA	NA
WP_036907238.1\|3958098_3958299_-	hypothetical protein	NA	NA	NA	NA
WP_175233692.1\|3958285_3960415_-	replication endonuclease	F1BUM9	Cronobacter_phage	5.2e-182	54.3
WP_049212279.1\|3960416_3960668_-	DUF2732 family protein	NA	NA	NA	NA
WP_109407776.1\|3960744_3961092_-	DUF5347 domain-containing protein	E5G6L5	Salmonella_phage	1.6e-16	40.9
WP_060557598.1\|3961256_3961766_-	phage regulatory CII family protein	E5G6L3	Salmonella_phage	8.4e-38	49.1
WP_049212271.1\|3961798_3962029_-	hypothetical protein	NA	NA	NA	NA
WP_060557597.1\|3962176_3962767_+	phage repressor protein CI	F1BUN8	Cronobacter_phage	1.9e-28	34.3
WP_060557596.1\|3962786_3963740_+	hypothetical protein	NA	NA	NA	NA
WP_060557595.1\|3963726_3964782_+\|integrase	tyrosine-type recombinase/integrase	A0A218M4I3	Erwinia_phage	3.8e-117	61.1
WP_164484803.1\|3965098_3965203_+	hypothetical protein	NA	NA	NA	NA
WP_060557702.1\|3966306_3966780_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_060557594.1\|3966820_3967147_-	hypothetical protein	NA	NA	NA	NA
WP_060557593.1\|3967139_3967937_-	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_004245589.1\|3969232_3970150_+	hypothetical protein	NA	NA	NA	NA
3968309:3968325	attR	NA	NA	NA	NA
WP_012368332.1\|3970231_3970411_-	DUF2474 domain-containing protein	NA	NA	NA	NA
WP_060557592.1\|3970388_3971396_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_060557591.1\|3971395_3972748_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_060557590.1\|3973410_3975696_+	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA
WP_060557589.1\|3975763_3976675_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_060557588.1\|3976886_3978407_-	HAMP domain-containing protein	A0A2H4J162	uncultured_Caudovirales_phage	6.1e-07	42.6
WP_060557587.1\|3978562_3980131_-	chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-10	33.7
WP_060557586.1\|3980531_3981212_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_004245603.1\|3981302_3981878_-	TerD family protein	K4JRX3	Caulobacter_phage	1.2e-27	40.3
WP_060557585.1\|3981954_3982533_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	3.2e-33	41.0
WP_004245605.1\|3982600_3983626_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3983660_3984116_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_060557584.1\|3984140_3985289_-	TerD family protein	NA	NA	NA	NA
WP_004245609.1\|3985289_3985874_-	TerD family protein	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_060557583.1\|3986264_3987410_+	phosphoribosyltransferase domain-containing protein	A0A172Q0Y1	Acinetobacter_phage	1.6e-31	27.2
WP_060557582.1\|3987402_3988173_+	hypothetical protein	NA	NA	NA	NA
WP_060557581.1\|3988175_3989252_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	2.0e-36	32.5
WP_060557580.1\|3989251_3990196_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_004245615.1\|3990469_3990937_+	hypothetical protein	NA	NA	NA	NA
WP_060557579.1\|3991073_3991481_-	TonB family protein	NA	NA	NA	NA
WP_060557701.1\|3991577_3992291_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004245618.1\|3992443_3993460_+	hypothetical protein	NA	NA	NA	NA
WP_060557578.1\|3993463_3994408_+	hypothetical protein	NA	NA	NA	NA
WP_060557700.1\|3994404_3995028_-	tetracycline resistance transcriptional repressor TetR(J)	NA	NA	NA	NA
WP_060557577.1\|3995118_3996315_+	tetracycline efflux MFS transporter Tet(J)	A0A2H4UVM2	Bodo_saltans_virus	5.1e-09	24.0
WP_004249433.1\|3996575_3996866_-\|holin	phage holin family protein	C7BGD7	Burkholderia_phage	7.5e-15	44.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage