CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN997841	Propionibacterium freudenreichii subsp. shermanii isolate PFREUDJS1 chromosome I	3 crisprs	DEDDh,csa3,DinG,WYL,cas3,csb1gr7,csb2gr5,csb3,cas1,cas2	0	19	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN997841_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997841_1

2098890-2098988

Orphan

Consensus_repeat	Method
GGTCAGCCCAACAAGCTGACCCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN997841_1

>merge|NZ_LN997841|1|2098890-2098988|CRISPRCasFinder
GGTCAGCTCAAGGAGCTGACCCACGGGGTCTGCAACGGGGTCAGCCCAACAAGCTGACCCACTGGATCCACCACAGGTCAGCCCAACAAGCTGACCCAC

>NZ_LN997841|1|1|2098890-2098988|CRISPRCasFinder
GGTCAGCTCAAGGAGCTGACCCAC	GGGGTCTGCAACGGGGTCAGCCCAACAAGCTGACCCACTGGATCCACCACA
GGTCAGCCCAACAAGCTGACCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997841.1\|WP_013160592.1\|2097350_2098367_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966
NZ_LN997841.1\|WP_048768947.1\|2090507_2092997_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273429
NZ_LN997841.1\|WP_013160594.1\|2095211_2096252_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_LN997841.1\|WP_057374802.1\|2102013_2102955_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176205
NZ_LN997841.1\|WP_013160596.1\|2093133_2094387_+\|cardiolipin-synthase-B	unknown	unknown	gnl\|CDD\|224419
NZ_LN997841.1\|WP_044636044.1\|2085704_2086565_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|237637
NZ_LN997841.1\|WP_036939900.1\|2099839_2101033_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
NZ_LN997841.1\|WP_013160586.1\|2103005_2103893_-\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|370378
NZ_LN997841.1\|WP_036939556.1\|2094459_2095215_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226963
NZ_LN997841.1\|WP_013160588.1\|2101378_2101714_+\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_LN997841.1\|WP_013160602.1\|2085375_2085699_-\|DUF3017-domain-containing-protein	unknown	unknown	gnl\|CDD\|378602
NZ_LN997841.1\|WP_013160584.1\|2105959_2106988_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|183235
NZ_LN997841.1\|WP_080516059.1\|2088313_2089162_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
NZ_LN997841.1\|WP_063493812.1\|2106984_2108043_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_LN997841.1\|WP_013160590.1\|2099144_2099843_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LN997841.1\|WP_044636040.1\|2096322_2097279_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_LN997841.1\|WP_063493811.1\|2104097_2105651_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_LN997841.1\|WP_036939569.1\|2109710_2110691_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380532
NZ_LN997841.1\|WP_013160600.1\|2086638_2088192_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_LN997841.1\|WP_013160580.1\|2110934_2111972_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380488

Protein	Function_ID	Function_description	E-value
NZ_LN997841.1\|WP_013160592.1\|2097350_2098367_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	3.89977e-74
NZ_LN997841.1\|WP_048768947.1\|2090507_2092997_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LN997841.1\|WP_013160594.1\|2095211_2096252_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.00184e-95
NZ_LN997841.1\|WP_057374802.1\|2102013_2102955_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176205	cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	1.7823e-125
NZ_LN997841.1\|WP_013160596.1\|2093133_2094387_+\|cardiolipin-synthase-B	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	7.67668e-76
NZ_LN997841.1\|WP_044636044.1\|2085704_2086565_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|237637	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	1.68448e-163
NZ_LN997841.1\|WP_036939900.1\|2099839_2101033_-\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.63584e-25
NZ_LN997841.1\|WP_013160586.1\|2103005_2103893_-\|DUF1963-domain-containing-protein	gnl\|CDD\|370378	pfam09234, DUF1963, Domain of unknown function (DUF1963). This domain is found in a set of hypothetical bacterial proteins. Its exact function has not, as yet, been described.	2.43747e-44
NZ_LN997841.1\|WP_036939556.1\|2094459_2095215_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	7.55434e-140
NZ_LN997841.1\|WP_013160588.1\|2101378_2101714_+\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	7.54301e-21
NZ_LN997841.1\|WP_013160602.1\|2085375_2085699_-\|DUF3017-domain-containing-protein	gnl\|CDD\|378602	pfam11222, DUF3017, Protein of unknown function (DUF3017). This bacterial family of proteins with unknown function appear to be restricted to Actinobacteria.	2.63412e-16
NZ_LN997841.1\|WP_013160584.1\|2105959_2106988_-\|sugar-ABC-transporter-permease	gnl\|CDD\|183235	PRK11618, PRK11618, inner membrane ABC transporter permease protein YjfF; Provisional.	1.75529e-91
NZ_LN997841.1\|WP_080516059.1\|2088313_2089162_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.18551e-90
NZ_LN997841.1\|WP_063493812.1\|2106984_2108043_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	1.20632e-58
NZ_LN997841.1\|WP_013160590.1\|2099144_2099843_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.02291e-65
NZ_LN997841.1\|WP_044636040.1\|2096322_2097279_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.53609e-122
NZ_LN997841.1\|WP_063493811.1\|2104097_2105651_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_LN997841.1\|WP_036939569.1\|2109710_2110691_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380532	cd06309, PBP1_galactofuranose_YtfQ-like, periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.	3.26283e-102
NZ_LN997841.1\|WP_013160600.1\|2086638_2088192_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_LN997841.1\|WP_013160580.1\|2110934_2111972_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|380488	cd01574, PBP1_LacI, ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor LacI specific for lactose, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of LacI is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	1.72778e-103

>NZ_LN997841.1|WP_013160592.1|2097350_2098367_-|ABC-transporter-substrate-binding-protein
MSSTRFTNRGTLAVVALSAALLAGGLTACSSGAGSDTSPATHSAAALSSIEITDNNGTHTVTTPPQSVVALDNRTFETLSQWGVGLKAAAVSLMPSTISYTTDKSIVDIGNHREPNLEAIVAAKPDLVINGQRFTQYTDEIKSLVPDTTILDLDPRDGEPFDQELKRQTTVLGEVFGKQAEAKKLNDDLDGAIARVKKAYKPADTVMAVNTSGGEIGFIAPHVGRALGPVYDFAGLTPALQVQGSSKDHKGDDISVEAIASSNPTWILVMDRDAAISADDPSYKPASELLKNSQALAGVTAVKEGNIVTMPADTYTNESIQTYTEFLNDFAAALESRA
>NZ_LN997841.1|WP_044636040.1|2096322_2097279_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MPDRKLLDPKLLVGIVVVAGLLVLSLTTGVYDVFGASDGSRMFQITRVPRTVALVLAGAAMAMSGLVMQLLTQNRFVEPTTTGTTEWAGLGLLLVMVIAPNASIGTKMAVAVVAAFLGTMVFFAFLRTVTLRSSLIVPIVGIMLGAVVSSISTFIAIRMDALQSLGVWFAGSFTSILRGQYEILWVVAAVGVAIFLVADRFTVAGLGKSVATGVGMNYERIILMGTGLVAVATGVVTVVVGNLPFVGLIVPNIVSLARADDLRSNLPWVCLLGIGLVTVCDLLGRVIIMPFEIPVSLILGIVGSVVFVVLLLRQRRRG
>NZ_LN997841.1|WP_013160594.1|2095211_2096252_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MVVDTPTRETPPVRTHTGAFATRAARRRYLVVVVGLAVAAVAASFGLLAWANPMPVGSRGFWKIAQRRLASLVVIAVVAFSQALATVAFQTITNNRIITPSIMGFESLYRAVQTSAVYFLGVAGVVALQGVPQFLIQVAVMVALAVALYGTLLSGRHANLQVMLLIGIVIGAGLGSVATFMQRMLSPSEFDVLSARMFGNISNAEASYLPVAVPLCLAAGLGLWVRSQRLNVMALGASAATGLGLNHRRETMLGLTLVSVLIAVSTALVGPMTFFGFLVATLTYSLAGTHDHRRIFPVAVLTGFVVLAGAYFVMRYVFYAQGMVSVIIELVGGTTFLIVLLRKGRL
>NZ_LN997841.1|WP_036939556.1|2094459_2095215_-|ATP-binding-cassette-domain-containing-protein
MIALADVLKKYSPEVCIGPVDLHIPDGGITALVGPNGAGKSTLLTMIGRLLGLDTGVIEIAGYDVARTKSADLARVVSVLQQENHFVTRLTVRQLVGFGRFPYTHGRLSAADEELVDQALDFLALRDLEARYLDELSGGQRQRAYVAMVLAQDTEYVLLDEPLNNLDMRHSVQMMRHLHRAARELGRTIVIVLHDINFAGRYADHICAMKDGRVAAFGPSDEIMDSAVLTEVFDTPVDVVQGPHGPLAVYY
>NZ_LN997841.1|WP_013160596.1|2093133_2094387_+|cardiolipin-synthase-B
MRLPPATGRVVRNALLGILGAQLGAAGVLVAADNVRKHRAGPARFPRSAVTQARADDDLVSVYSYGEDLYNDMLTAIRRAKHTIFFETFIWKNDPIGQDFKQALIEAANRGVAVYIVYDQFANMVVRPSFFRFPDNIHVKRHPLVQSVAFWNLRNSGRDHRKILVVDSRVAFMGGYNIGSRYARTWRDTHARFEGPSVADFENAFVDYWNLRPVHLLSSQRSSMPELPDTSQRRWDGSVRLSRNTPRWAVFPIRNMYLEAIDKAQRNIWLTSAYLIPDDDLRTALARAAQRGVDVRIIVPAQSNHVIADWLSRGYYTGLLRDGIRLFLFHNAMVHAKTATIDGHWSTIGTANIDRLSLAGNYEVNAEITSPQVATALERIFLTDQSNCTEMDLARWERRSIVAKGTEWLLAPWRPLF
>NZ_LN997841.1|WP_048768947.1|2090507_2092997_-|UvrD-helicase-domain-containing-protein
MTDQTPPDLFSAFDQRLSALGAPGSGEGFAPHTPHDAHDDAEALLHGLNPPQEQAVVHEGSPVLVVAGAGSGKTRVLTRRIAWLIAQRGVHPGSILAITFTNKAAAEMRSRVAELVGPRTRTMWVSTFHSACVRILRTELAEAPELGLRRNFSIYDDTDTKRLMTLVLRDQNLDTKKFPPRTVMGWISNAKNELLGPGAAAEQADNGNEELYAQAYEEYQRRLRAANAMDFDDLIMITVQLLHDHPDIREKYRRRFRQVLVDEYQDTNHAQYLLIRELCAPNEDQIDAPRVDPPELLVVGDSDQSIYAFRGADVRNILDFEQDFPGARTILLEQNYRSTQTILSAANAVIQHNSGRPVKKLWSDAGDGDKIIGWVADTEHDEARWVAEKIDELHDHQQAAYSDAAVFYRTNAQSRAFEEVFIRLGLPYRVVGGVRFYERREVRDALAYLRAIANPADDVSIRRIINVPKRAIGARAETALEMFAVSQSIPFSQAVDRAAEVPGLATRSRHQVESFASMMAGFRGLVAAGSSADEVVAAVLKDSGLLDELKDSKDPQDETRVENLVELVAVAQEFVAQAHTLDLSAGLRPDAPGDQDAPELADELVAGMPEADDFLGAFLERIALVADSDQIPDSDPDSAGVVTLMTLHTAKGLEFDNVFLTGMEDGIFPHMRALADPAELSEERRLAYVGITRARRRLFMSRAAVRTVWGQPQYNPPSRFLEEIPAELIDWQRTGADLTSWGSSASARTASARRQTSTGGPVFGSGHGDLPRTKTVASLEPGDRVLHSSFGMGTVVAAAGSGNNATADVDFGSAGVKRLALRFAPLEKL
>NZ_LN997841.1|WP_080516059.1|2088313_2089162_-|phosphoribosylglycinamide-formyltransferase
MCSSSSHVAALPHRALLPNRQAPARSVRRCVPCCVVAGRRRCPRRPGPTTTTPPTRHRPPIPAAGQRTRCTATKGRLPGVAYRVVVLVSGSGTLLQALLDAQAAGALDARIVAVGSDQPGCRALARAQDAGVDTFVVPMTTLLPRGSAARQAWDEEFARAVDACSPDLIVLAGFMKLLGEPFMRRFAGRVINTHPAMLPAFPGAHAVRDALTAGATTTGSSIFWVDDGVDTGSLIVQEPVPVHPGDDEDTLHERIKVTERRLLVATVNELARRAPAGDPTSV
>NZ_LN997841.1|WP_013160600.1|2086638_2088192_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MTDPTRAPIRRALVSVYDKTGLEELGRALAAAGVEIVSTGSTARKLSEAGVEVVPVEQVTGFPETLDGRVKTLHPAVHAGILADRRLESHRRQLDELGIKPFDLVVSNLYPFSQTVASGADFDECVEQIDIGGPSMVRAAAKNHPSVAIITSPDQYSQLTDALAQGGFTLAERRVLAAKAFAHTAAYDASVASWFAEQTTDEGLPGFIGQAATKLHDLRYGENSHQRAAVYAAEGAAPGLVGAEQLGGKEMSYNNYTDADAARRAAYDFSGPAVAIIKHANPCGIAVGSDIADAHAKAHACDPVSAYGGVIAANQIVTLAMAQQVKPIFTEVIVAPDFEPAALELLQTKKNLRILKAEDFHFDKFLWREISGGLLASDPDRLDAPGDQTSGWKLVAGPAADAAMLSDLLFAWKACRSVKSNAILLAHDGASVGVGMGQVNRVDSCRLAVSRAGDRAKGSVAASDAFFPFSDGPQILLDAGVSAIVQPGGSIRDEETIEAASKAGVTMYFTGNRHFFH
>NZ_LN997841.1|WP_044636044.1|2085704_2086565_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MTAQRLDGKAVAAQIKIELKQRVDALREQGVNPGLGTVLVGDDPASQIYVNGKHRDCEQVGIESYRVDLPADATPEQVERSIRVLNDSTMCTGYIVQLPLPPQIDPNWALELIDPDKDADGLTSDNLGKLVLGRSGVLPCTPRGIVELLRRYEIPLDGAKVCVVGRGTTVGRPLGLLLTRRDVNATVTLCHTGTKNLAEETRQADIVIGAAGHPGLVTASMLKPGAVVVDVGVRRIEGKPVGDFTADVWDVASYVTPNPGGVGPMTRAMLLVNVVERAEQIAAQEQ
>NZ_LN997841.1|WP_013160602.1|2085375_2085699_-|DUF3017-domain-containing-protein
MTPAPPSSTKQPVAAPLKLDRLRAQWPLLLCLAFFVAGMAVTAAAHWRRGAVLMGAGLGLAGVLRLFLPPRLAGLLVVRRRWFDVLVGIVGGTTMCVLAILVPPLER
>NZ_LN997841.1|WP_013160590.1|2099144_2099843_-|response-regulator-transcription-factor
MTSLPGPLTTDEPRPEGPRRVVLVDDHDIFRAGVRHELTAAAPDEIDVVGEAGDVEQAVKVITGTTPDVVLLDVHLPGGGGAEVVRQVHQIDPKITFLALSVSDAAEDVIAVIRAGARGYVTKSISTADLVEAIGRVATGDAVFSPRLAGFVLDAFSGSISVESIDEDLDRLSQREREVMKLIARGYTYKEVARELFISIKTVETHVSNVLRKLQLSNRHELTKWATDRKLV
>NZ_LN997841.1|WP_036939900.1|2099839_2101033_-|ATP-binding-protein
MRGSWLGGVCTGIADYLGSPVWPVRLCFVLLAMTAYLGVVAYAALWAFLPIKDEAAEQARAVRPARKPRSSRRQDLEVWLSIGLVLLLCLGLLVLSRLFGLGSIHAFFWPVVLAAVGIGLVWRQADQPEEEPDRLVPRWMAPLVSSSKWATVLRMGLGMTLVGASVLLVAYTQVDGPYLPAVLGMVALALAGFGVLTAPWMNRMRSNLARAHEEKLVADARADMAAHLHDSVLQTLALIQRQADDPKAVASLARRQERELREWLYGEAPGPRDFRAALRDAGAQVEDSSGVRVEVICVGDATLNDGLSAMILAAREAMMNSAKHSGADHIDVYAEVDDDHVELFVRDRGVGFDAEQIRADRMGVRRSIIERMERHGGTAQVRSAPGEGTEVKLEIAR
>NZ_LN997841.1|WP_013160588.1|2101378_2101714_+|PspC-domain-containing-protein
MRTAGAVQTPIQEEPMGTKQLVRRHDNRWIAGVAGGLADYWGIDALAVRLGFIILGLVTFGTAFWAYLICWLLIPDGVDGSKGLDAVKRTINGFRDKNDGPQDFNPYDDTK
>NZ_LN997841.1|WP_057374802.1|2102013_2102955_+|zinc-binding-dehydrogenase
MLAMVLDHPGGADTFRPEERPIPEATATHSVLEVMAFGVNHADLITRAGGSPDVRFPRVIGIEAVGRVHATSPASGLEVGQRVVTLMGGLGRDFDGTYQEYALVPNSQLYPVGIEMAWNRLATIPESFYTALGSLDRMHLTAGDALLIRGGTSSVGLAAMQLAKSFGVRVTSTTRSPGKIARLEALGADEVLVDAGTLPGTERFDGVLELVGAATLDDSMGHAAPRGCVVVTGGLGGQWTVPDFDPFSIRGYLTNFQSTEVNPALLRHMLTLVAQQGLSLPIVGEFPLPDVGRAHEALETSTEMGKIVVSVAH
>NZ_LN997841.1|WP_013160586.1|2103005_2103893_-|DUF1963-domain-containing-protein
MSQDLKQALFGVFDAVQKNAIKLDFGADPEPGEAGQSRLGGRPDVPRDFEWPRFQDKDDDSADANRPLTFLAQVNLADATRYDTEGLLPTAGVLSFFYEMETQEWGFDPRDKGSARVFFFEDPATLRPASVPDDLDDWFPDGQAISYRNMVDLPAWLGFTELPEEVRRTNPLPVPLTDIEWEDYDAMREEYGAPSEGDDAVTTKLLGHPDVVQNPMEAECEMVTRGMADGAEGEEISQELRDDIEKASRDWTLLFQMGTDSGLEFGDVGHINYWIKKQDLARRDFDKAWLILQCG
>NZ_LN997841.1|WP_063493811.1|2104097_2105651_-|glutamine-hydrolyzing-GMP-synthase
MPASHDLVLVVDYGAQYAQLIARRVREAHVYSEIVPHAMSVDEMVAKKPTAIILSGGPASVYVPDAPKVDPALFSTGIPVFGICYGFQLMAGALGGTVEHTGTSEYGRTSVAIDDTGVLLHDLDDISSVWMSHGDSVTAAPAGFASLAHTAGAPIAAFEAPERKLAGVQWHPEVAHTERGQEVIEHFLFDFAGCKPTWTSSSIVDDQVSRIRAQVGDKRVLCALSGGVDSAVAAALVQRAIGDQLTCCFIDHGLLRKGEAEQVKHDFVQITGVDLVVADESERFLSVLAGVSEPEAKRKIIGREFIRSFEDVARQIAGDKGIDFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDLQFTLIEPLRALFKDEVRAVGAELGLPDSMVWRQPFPGPGLGIRIVGEITQDRLDLLREADAIAREELTAAGLDREVWQMPVVLLADVHSVGVQGDGRTYGHPIVLRPVSSEDAMTADWSRLPYDLLEKISTRITNQCPEVNRVVLDVTSKPPATIEWE
>NZ_LN997841.1|WP_013160584.1|2105959_2106988_-|sugar-ABC-transporter-permease
MSAQTLNAAVPTRALPSWLKIDRKRIPTLASVVIFLIMIIYGQAAYGQTLTMSTASNLLINNAHLIILAVGMTFVILTGGIDLSVGAVIAFSSVLGAQLLNAGWNPVLVMGIIVVVGGLFGLASGVLVQYFRVQPFIATLAMMFLARGLASILSTTPIRLDDASGFRTLATQWKVIDGPKVNDLVITPNVLIAVVVVVAGFFILHRTRTGRTVYAIGGSEPSAELMGLPVNRTKYLIYVISGLCAGIASVVYTSKLGMAQNVTGVGWELDAIAAVVIGGTLLLGGAGYVLGSVLGALVLGLMNVLIARDGSIPPEATTIITGAILLLFVLLQRAVVKRDHND
>NZ_LN997841.1|WP_063493812.1|2106984_2108043_-|ABC-transporter-permease
MKAIVKNQYFWGIIALVLLIMVDVIKDPSFIQITVSNGNLYGSLIDILRGSAPVLMIAIGMTLVIATAGIDLSVGSLMAVAGAVSMEFLASAANSGSTGAVLTALGLSLLVTVILGAINGLLVSVVGLQPFITTLIMMMTGRGIAKVITGGQNTSARSDGFAWISTGTVFGFPVAFVIAIAIVALVALVVRRSALGMTIESVGINQRASRMAGIKPLYILFSVYVISGLLAGMAGVFATANVMTVEVSKTGMDMGMDAILAVVIGGTSLAGGRFSLGGSAIGALLITTLNRTVTFLNVPSAATPAFKAVVIIIVCLLQSERVRNLFKTLKRSRRVVEAAPARVEEVKEVVAA
>NZ_LN997841.1|WP_036939569.1|2109710_2110691_-|ABC-transporter-substrate-binding-protein
MRKLLKLIAALGAFALALTGCSGGGSGSDSGSSSKTLTVGFVAVGPEGGWRTANKTNIQNTFSKDNGINLKYAPSDNGDQASQITAMTSFIDEGVDAILLSATEATGWENVLNRAKEAEIPVFLLDRGIEPDNTSLYASRIAPDNVAISESAANWAVKQFPEGAKYVVLEGPAGLSVVNDRNKGWDSVMSTHPEFQKIASQSANWSQNDGKSVTETLLKANPGIQLIFAQNDEMGLGATQAVTEAGLTPGKDVKIITIDGTKAALESLSAGQLSFVAEYNPLFGDIALNAVKKAKAGEHVDALYTVDSVTFDSPEAAKAALPNRAY
>NZ_LN997841.1|WP_013160580.1|2110934_2111972_-|LacI-family-DNA-binding-transcriptional-regulator
MAAGTAPNIRDVAELAGVSHQTVSRVINDHPSIQPQTRARVEAAIKTLGYRPNSAARSLARMRTGRIGAIVDSPEHFGPMNTLRGVEVASRRAGYFLSSVSVNDDSVDAINQSLEFLLDQNVEGLCLIAPRLPLLEVIRRRGLQIPSVVIATDTAHLVDDNGLQASVDQELGTRMMVDYLLELGHTRIAHLSGPHDWGDARSRRATFEATLAAHGLTPAAIVEGDWSPDSGFAAGPGLIEGTGATAVFSANDQMALGLVHYLSEVGLRVPDDVSVVGFDNTPESAHMIPPLTTVRQNFEKLGEMAIGSLLARIKGARVERETLRTQPSLVVRSSAGPRPATQRSR

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Crispr_ID: NZ_LN997841_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997841_2

2424099-2427021

Unclear

Consensus_repeat	Method
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	PILER-CR
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CRISPRCasFinder
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CRT

40 spacers

cas2,cas1,csb3,cas3,csb2gr5,csb1gr7

The CRISPR arrays of NZ_LN997841_2

>merge|NZ_LN997841|2|2424099-2427021|PILER-CR,CRISPRCasFinder,CRT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCTGGGTAGTAGTATAATCTTACTTGTTGATGAAGGGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGACGCTTGCGTGGAGCAGCTCGGCGACGTCCTTCTGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTGTTGGATGCCTGGCTGGTGGGGATCGTGCGCCACAGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCCCGAACTGGCGGTCCCGGCCGCCTCTTCTTCCGTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCGAAGGGGATCAGTTTCCAGCCGGTCGAGGTCCTGACGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTGTAGCAACAGTGCTCCAGCATGTCAAGTGTGGGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACGCCCGGACGTGACATCCATCAGTTCTTCGACCCCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCTGTCATTCGCCCATTGGGCCGCTTGAGAAGCTTGATATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCTCGGGGATGCTGCCCTGGCGATGCTGCCGACCGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACAGCGCGGTCCGCTCGATCATCGGCGACCAGCCCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACGATACAAGACTGACCTAACGAATAAGGAAACGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCCTCCAGCGGTGGAAAGAGCGGCAGCGCTACGGACGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGACCGCCAAGATGATCAATGAGCGGAAGCACACATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTGAAGCAGGCGCCCGCAGCGCCCCATCGCCCGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACCGGGTGAAGCGCGCCGGGGGCCTGAGCATCAAACATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGATCGTAGCGGGGCTGTTGGCAGCAAGTCTCGCTGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACTACAGGTGTTCGATCTGGTCTGTGGCCGTCGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTAGGTGGAGGGGCGCAGACATTAAAATCTACGCCCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCAGAACAACGCTCGAGGAAAGGGTTCCAATCTCATGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGTGTTGAGTTACCGCCATATTCGGCCAGAGTCTTGAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGTTTCGGCTGTCGCCACCAACTGCTCCGGGATGGGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACACCCGCCGCGATCGAGGCCGACCTGAAACGCTGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACGGCGGGCCAGTTGCACAACACGGCCACCCGCACCAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTCGCGGTGCGGTCGGCAATGCTGGACGCGTGCCCGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCTCACGCCCGGAACCCATGCCGGAAGATCAGTCGCCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCGGCGCCTCAGATGGACCTGTCCAGCGGTGAGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACGGCCTCGCCGTCGCGGCTGATGCTCGCATGCATCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCTCGGCGACGCCGCCCTGGCGATGCTGCCGACCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTGGTTTCGACGCCCTTGTCGGGGCCGTGCCTGCCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCCGGTGCTCCCGTCACGCCGGGGCGTTCTTCGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACCTGGGCGGCCTTCGGATTGTCCAGGTCAAAGAAGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGCGAGTTGGCTCGGACCTCTGGACAATTTTTGGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCAGCTGCTGGTCGCTTTGGTGCAGGGCATCCTCTCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTATTCACAGGATGCATGGGTTCGCTCACATATGGACGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGAGATCACAGATGCCGAGCTCATCACCATTCAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGACGTGTCAGGCGACAGCGGAACCAAGACAGCCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTCGCCGTGAAGACCCGCGAGGCGGAGGTCGCCCGTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGCGGGTCCGCGAGATTCGTCGGCGTCGCACGGCGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAGATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGAGCGAAAGAGCGATCATTCCGGGTATGGATCAAACCATTGCCCATCCTTCTGGAGAGGCCCTTCATTGAGGC

>NZ_LN997841|2|1|2424099-2427021|PILER-CR
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTGGGTAGTAGTATAATCTTACTTGTTGATGAAGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACGCTTGCGTGGAGCAGCTCGGCGACGTCCTTCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTTGGATGCCTGGCTGGTGGGGATCGTGCGCCACAGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCCCGAACTGGCGGTCCCGGCCGCCTCTTCTTCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGAAGGGGATCAGTTTCCAGCCGGTCGAGGTCCTGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTAGCAACAGTGCTCCAGCATGTCAAGTGTGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGCCCGGACGTGACATCCATCAGTTCTTCGACCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCTGTCATTCGCCCATTGGGCCGCTTGAGAAGCTTGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGGGATGCTGCCCTGGCGATGCTGCCGACCGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACAGCGCGGTCCGCTCGATCATCGGCGACCAGCCCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGATACAAGACTGACCTAACGAATAAGGAAACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCTCCAGCGGTGGAAAGAGCGGCAGCGCTACGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACCGCCAAGATGATCAATGAGCGGAAGCACAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTGAAGCAGGCGCCCGCAGCGCCCCATCGCCCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACCGGGTGAAGCGCGCCGGGGGCCTGAGCATCAAAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGATCGTAGCGGGGCTGTTGGCAGCAAGTCTCGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACTACAGGTGTTCGATCTGGTCTGTGGCCGTCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTAGGTGGAGGGGCGCAGACATTAAAATCTACGCCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CAGAACAACGCTCGAGGAAAGGGTTCCAATCTCATG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGTGTTGAGTTACCGCCATATTCGGCCAGAGTCTTGAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGTTTCGGCTGTCGCCACCAACTGCTCCGGGATGGGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACACCCGCCGCGATCGAGGCCGACCTGAAACGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGGCGGGCCAGTTGCACAACACGGCCACCCGCACCAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCGGTGCGGTCGGCAATGCTGGACGCGTGCCCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTCACGCCCGGAACCCATGCCGGAAGATCAGTCGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGGCGCCTCAGATGGACCTGTCCAGCGGTGAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGGCCTCGCCGTCGCGGCTGATGCTCGCATGCATC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGCGACGCCGCCCTGGCGATGCTGCCGACCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGGTTTCGACGCCCTTGTCGGGGCCGTGCCTGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCGGTGCTCCCGTCACGCCGGGGCGTTCTTCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACCTGGGCGGCCTTCGGATTGTCCAGGTCAAAGAAG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGAGTTGGCTCGGACCTCTGGACAATTTTTGGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCAGCTGCTGGTCGCTTTGGTGCAGGGCATCCTCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TATTCACAGGATGCATGGGTTCGCTCACATATGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGAGATCACAGATGCCGAGCTCATCACCATTCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGACGTGTCAGGCGACAGCGGAACCAAGACAGCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCCGTGAAGACCCGCGAGGCGGAGGTCGCCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGGGTCCGCGAGATTCGTCGGCGTCGCACGGCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG
ATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGA	GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC
ATTGCCCATCCTTCTGGAGAGGCCCTTCATTGAGGC

>NZ_LN997841|2|2|2424099-2427021|CRISPRCasFinder
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTGGGTAGTAGTATAATCTTACTTGTTGATGAAGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACGCTTGCGTGGAGCAGCTCGGCGACGTCCTTCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTTGGATGCCTGGCTGGTGGGGATCGTGCGCCACAGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCCCGAACTGGCGGTCCCGGCCGCCTCTTCTTCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGAAGGGGATCAGTTTCCAGCCGGTCGAGGTCCTGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTAGCAACAGTGCTCCAGCATGTCAAGTGTGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGCCCGGACGTGACATCCATCAGTTCTTCGACCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCTGTCATTCGCCCATTGGGCCGCTTGAGAAGCTTGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGGGATGCTGCCCTGGCGATGCTGCCGACCGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACAGCGCGGTCCGCTCGATCATCGGCGACCAGCCCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGATACAAGACTGACCTAACGAATAAGGAAACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCTCCAGCGGTGGAAAGAGCGGCAGCGCTACGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACCGCCAAGATGATCAATGAGCGGAAGCACAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTGAAGCAGGCGCCCGCAGCGCCCCATCGCCCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACCGGGTGAAGCGCGCCGGGGGCCTGAGCATCAAAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGATCGTAGCGGGGCTGTTGGCAGCAAGTCTCGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACTACAGGTGTTCGATCTGGTCTGTGGCCGTCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTAGGTGGAGGGGCGCAGACATTAAAATCTACGCCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CAGAACAACGCTCGAGGAAAGGGTTCCAATCTCATG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGTGTTGAGTTACCGCCATATTCGGCCAGAGTCTTGAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGTTTCGGCTGTCGCCACCAACTGCTCCGGGATGGGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACACCCGCCGCGATCGAGGCCGACCTGAAACGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGGCGGGCCAGTTGCACAACACGGCCACCCGCACCAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCGGTGCGGTCGGCAATGCTGGACGCGTGCCCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTCACGCCCGGAACCCATGCCGGAAGATCAGTCGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGGCGCCTCAGATGGACCTGTCCAGCGGTGAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGGCCTCGCCGTCGCGGCTGATGCTCGCATGCATC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGCGACGCCGCCCTGGCGATGCTGCCGACCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGGTTTCGACGCCCTTGTCGGGGCCGTGCCTGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCGGTGCTCCCGTCACGCCGGGGCGTTCTTCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACCTGGGCGGCCTTCGGATTGTCCAGGTCAAAGAAG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGAGTTGGCTCGGACCTCTGGACAATTTTTGGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCAGCTGCTGGTCGCTTTGGTGCAGGGCATCCTCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TATTCACAGGATGCATGGGTTCGCTCACATATGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGAGATCACAGATGCCGAGCTCATCACCATTCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGACGTGTCAGGCGACAGCGGAACCAAGACAGCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCCGTGAAGACCCGCGAGGCGGAGGTCGCCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGGGTCCGCGAGATTCGTCGGCGTCGCACGGCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG
ATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGA	GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC
ATTGCCCATCCTTCTGGAGAGGCCCTTCATTGAGGC

>NZ_LN997841|2|1|2424099-2427021|CRT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTGGGTAGTAGTATAATCTTACTTGTTGATGAAGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACGCTTGCGTGGAGCAGCTCGGCGACGTCCTTCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTTGGATGCCTGGCTGGTGGGGATCGTGCGCCACAGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCCCGAACTGGCGGTCCCGGCCGCCTCTTCTTCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGAAGGGGATCAGTTTCCAGCCGGTCGAGGTCCTGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTAGCAACAGTGCTCCAGCATGTCAAGTGTGGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGCCCGGACGTGACATCCATCAGTTCTTCGACCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCTGTCATTCGCCCATTGGGCCGCTTGAGAAGCTTGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGGGATGCTGCCCTGGCGATGCTGCCGACCGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACAGCGCGGTCCGCTCGATCATCGGCGACCAGCCCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGATACAAGACTGACCTAACGAATAAGGAAACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCTCCAGCGGTGGAAAGAGCGGCAGCGCTACGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGACCGCCAAGATGATCAATGAGCGGAAGCACAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTGAAGCAGGCGCCCGCAGCGCCCCATCGCCCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACCGGGTGAAGCGCGCCGGGGGCCTGAGCATCAAAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGATCGTAGCGGGGCTGTTGGCAGCAAGTCTCGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACTACAGGTGTTCGATCTGGTCTGTGGCCGTCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTAGGTGGAGGGGCGCAGACATTAAAATCTACGCCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CAGAACAACGCTCGAGGAAAGGGTTCCAATCTCATG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGTGTTGAGTTACCGCCATATTCGGCCAGAGTCTTGAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGTTTCGGCTGTCGCCACCAACTGCTCCGGGATGGGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACACCCGCCGCGATCGAGGCCGACCTGAAACGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGGCGGGCCAGTTGCACAACACGGCCACCCGCACCAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCGGTGCGGTCGGCAATGCTGGACGCGTGCCCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTCACGCCCGGAACCCATGCCGGAAGATCAGTCGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCGGCGCCTCAGATGGACCTGTCCAGCGGTGAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACGGCCTCGCCGTCGCGGCTGATGCTCGCATGCATC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTCGGCGACGCCGCCCTGGCGATGCTGCCGACCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGGTTTCGACGCCCTTGTCGGGGCCGTGCCTGCC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCGGTGCTCCCGTCACGCCGGGGCGTTCTTCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACCTGGGCGGCCTTCGGATTGTCCAGGTCAAAGAAG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGAGTTGGCTCGGACCTCTGGACAATTTTTGGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCAGCTGCTGGTCGCTTTGGTGCAGGGCATCCTCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TATTCACAGGATGCATGGGTTCGCTCACATATGGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGAGATCACAGATGCCGAGCTCATCACCATTCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGACGTGTCAGGCGACAGCGGAACCAAGACAGCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCGCCGTGAAGACCCGCGAGGCGGAGGTCGCCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGGGTCCGCGAGATTCGTCGGCGTCGCACGGCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG
ATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGA	GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC
ATTGCCCATCCTTCTGGAGAGGCCCTTCATTGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997841.1\|WP_143828470.1\|2431249_2431489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_060761331.1\|2410986_2411997_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225222
NZ_LN997841.1\|WP_013160286.1\|2432788_2433064_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_060761330.1\|2415769_2417311_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NZ_LN997841.1\|WP_081233863.1\|2423632_2423920_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_LN997841.1\|WP_097775951.1\|2412764_2414039_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_LN997841.1\|WP_013160297.1\|2420910_2422512_+\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_LN997841.1\|WP_013160291.1\|2428163_2428679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_063493650.1\|2422599_2423634_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LN997841.1\|WP_055343475.1\|2412002_2412290_-\|DUF2249-domain-containing-protein	unknown	unknown	gnl\|CDD\|370777
NZ_LN997841.1\|WP_013160299.1\|2417307_2419923_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_LN997841.1\|WP_044635951.1\|2419919_2420921_+\|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NZ_LN997841.1\|WP_013160292.1\|2427622_2428129_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_063493850.1\|2438844_2439267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_063493849.1\|2433460_2434777_+\|anaerobic-C4-dicarboxylate-transporter	unknown	unknown	gnl\|CDD\|237115
NZ_LN997841.1\|WP_063493950.1\|2430121_2431123_-\|zinc-binding-alcohol-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|176214
NZ_LN997841.1\|WP_063493951.1\|2435036_2438177_+\|DUF3427-domain-containing-protein	unknown	unknown	gnl\|CDD\|197297
NZ_LN997841.1\|WP_013160287.1\|2431581_2432331_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_LN997841.1\|WP_055345782.1\|2414568_2415768_+\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NZ_LN997841.1\|WP_048735580.1\|2438177_2438471_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN997841.1\|WP_060761331.1\|2410986_2411997_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	2.06018e-06
NZ_LN997841.1\|WP_060761330.1\|2415769_2417311_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	1.93821e-127
NZ_LN997841.1\|WP_081233863.1\|2423632_2423920_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.74305e-11
NZ_LN997841.1\|WP_097775951.1\|2412764_2414039_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_LN997841.1\|WP_013160297.1\|2420910_2422512_+\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.95656e-93
NZ_LN997841.1\|WP_063493950.1\|2430121_2431123_-\|zinc-binding-alcohol-dehydrogenase-family-protein	gnl\|CDD\|176214	cd08252, AL_MDR, Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	3.4929e-171
NZ_LN997841.1\|WP_055343475.1\|2412002_2412290_-\|DUF2249-domain-containing-protein	gnl\|CDD\|370777	pfam10006, DUF2249, Uncharacterized conserved protein (DUF2249). Members of this family of hypothetical bacterial proteins have no known function.	2.88981e-23
NZ_LN997841.1\|WP_013160299.1\|2417307_2419923_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.75868e-80
NZ_LN997841.1\|WP_044635951.1\|2419919_2420921_+\|hypothetical-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.00232e-143
NZ_LN997841.1\|WP_063493650.1\|2422599_2423634_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	3.86345e-81
NZ_LN997841.1\|WP_063493849.1\|2433460_2434777_+\|anaerobic-C4-dicarboxylate-transporter	gnl\|CDD\|237115	PRK12489, PRK12489, anaerobic C4-dicarboxylate transporter; Reviewed.	0
NZ_LN997841.1\|WP_063493951.1\|2435036_2438177_+\|DUF3427-domain-containing-protein	gnl\|CDD\|197297	cd09203, PLDc_N_DEXD_b1, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. All members of this subfamily are uncharacterized. Other characterized members of the superfamily that have a related domain architecture ( containing a DEAD/DEAH box helicase domain), include the DNA/RNA helicase superfamily II (SF2) and Res-subunit of type III restriction endonucleases. In addition to the helicase-like region, members of this subfamily also contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in the N-terminal putative catalytic domain. The HKD motif characterizes the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.70109e-76
NZ_LN997841.1\|WP_013160287.1\|2431581_2432331_-\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	5.11172e-29
NZ_LN997841.1\|WP_055345782.1\|2414568_2415768_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	2.52818e-30

>NZ_LN997841.1|WP_081233863.1|2423632_2423920_+|CRISPR-associated-endonuclease-Cas2
MRTLHRSDPRRPGVLLRRYDTTLKGYGERVQYSVFMVDCPPSHLLVLRHDLTDAMDIDEDSVVICDLGMSTSADAQRITWLGGQRYQSGGRSIII
>NZ_LN997841.1|WP_063493650.1|2422599_2423634_-|IS30-family-transposase
MARVGLSFSDRSEISTASKAGWSVRRTARHLGRCPSVILRELHRNSTKTRGYQAVTADVRAQRRRARPQQRKVAGDPVLQARVEADLAASWTPNEIAGRLRLEATDPTVERMANSADARGRTVSGEAIYQYIYAIPKGELARKGIFLQSKRTKRRPRTTGRTRGGPIVGMVPIAERGEDAAQRRVPGHWEGDLIIGKNGTSCAATLVERMSGFTGLLALPSKHAEPTADAVIEFFNDLPEMMKASLAWDQGSEMAQHAKVSLATAMPVYFADPHSPWQRPSNENTNRLYREYLPKGTVIPDHQPYLTTIAEEINNRPRRRLGYLTPTEAFARLLAGEPHVASTP
>NZ_LN997841.1|WP_013160297.1|2420910_2422512_+|CRISPR-associated-endonuclease-Cas4/Cas1
MSGDDKLPISLVAHTVFCPRRAWLEAQGEQADSYAMTAGTLAHRRVDQPAESRPEVRRAVSVHSESLGITGRCDVVEVSSDGLSVVEYKSTPVRRKAEITPAQAVQVGLQSMCLEEMGHHVTSGVVHFVNHHKDVPVPLGAEAREACRDWVTETRKVVEADSAPPPLLDDSRCNGCSHATICLPDEQVHNGGELKRRISVADPHGEILHAVTPGARLSMRDRQIRITRQGEQLAAVPLERVQGLVLHGNVDVSGALIREILWRRLTIVWCSGRGRVVGWATGAAAPNGQARMHQQALSEVGCLPVARAIVRAKLINQATLLRRNAAAATAPQEIRELSRVAMRVESLPELFAVEGRAAKAYFSEFPLILKSDSAQDFLDEWPGRHGRGAIDPLNAALNYAYGMLLADCVRAIAACGLDPHGGFLHSPSRNKPALALDLMEEFRAPVADSAVITCINNQTLTADMFSHTLGDVRLTRAGIAALTSAYERRVTTDIKHPTFGYPATWRRTMEIQARLLLGFIDGTRSEYIGMTVR
>NZ_LN997841.1|WP_044635951.1|2419919_2420921_+|hypothetical-protein
MKFEITGTLDTAITHFALVGLANILQEAGAHRVRLWWQDGAVARPTLQWEGPDAGEAVLAHARRHADPACWLQARRPAPEDGHALFSPRLKPPTDDEGWFELEELREHFLDAGLTRLDQRMIVNLGEPGYWVRQDGQPRPDHAASRWEMKTRNRGEEFIGQRLAPLAREVSTWTAGKVLDGLGGRAVNDVVGKNKPDSRTPTGLSSPGPTDNALAWCSLWGISAFTLVPKSIGVSATAGAVPPARSYPRLLVVPVVADPISPVLWTALARSRELLSAFSDDPVRSVDARQLLVRRGVIGACSFPLDKSDNDSAPERTLLRGTLHPFQEDADVW
>NZ_LN997841.1|WP_013160299.1|2417307_2419923_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTITLDDFATFFRAVNAGHDPFPWQTALLTGIAGSARWPSAITAPTGSGKSAVVEVHVFLNALYSAGSGPRVPRRLSTVVARRALVDSQADRAQRVADWLDEGDSPLAREMSALLQRLSAADDTPPLVIGHLRGGISLRSTWIDDPSACAVISATPDMWGSRLLLRGYGSSMAARPREGGLLGLDNAVVIDEAHLSRQLVGTARWVSQHNADVAERLGVPGLQVVESSATTRSASPDGIGIGPDDLADPTLRPRLTLPKPVTVVESAAWSGKKATDQYISTLVDQVQDMARTADDGTIGCIVNRVDTALRVAERLGDDCPCWVGPTRPLDLAQLKRSYPALLGLDTAPRQAMPRFLVATQTVEVGVDLDLSGLVTELAPADSLTQRFGRVNRRGLRDSGPLTVVAPPQDKLAEQLPYSLDDLADALQWLGGLPDTEGASPQAVADHPPKARTPERAIVKLPHVGDVMRWDATADLMWADEDLELWVRDSLEPDDAQVGIVVRQPLPDEDAEVIPLLAATPVDQAEVFPAGIAVARAVVDRILEGRGDHARAFLSRADEITPLGADDASAIRPGDVVIVDAGHALTRHGVVVSDANRAESLETRWGTPDVAVIQKDSADSQWLSALADLTAEDAQTEYSDLGGEGLLTLGPPNALGELPWIVVTSQKTAEEDEELRQEWSASDQPVLLTAHQSNVAGRARRLGERVALDPELTAALELAGAHHDDGKADPRFQHLRLSNYSSLVLAKSEHRSSQAVVRRQFAGGELPRGWRHELRSVAVSWAEVSLAPHGPLVARLIGTSHGRGRILPQPDAASLATPSDPAEVNERVAALFGSGEWPELMAATSTTYGVWGCAYLEALLRAADCQVSKEGS
>NZ_LN997841.1|WP_060761330.1|2415769_2417311_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MSPLTIRAVFPLGVFQGHRADGSPDRLPDTARLFSALVNAAGQGSEAIAVKGRLEPSSESTAALSWLEKHPPTMIRIPNHVPVSPDRRPDAYRKTGTVQGPKKSPAMRIGARQISTGTAIDDCVGWFWADAPSEVQETVGRLCADVSCLGEDDSPVILTPDQFVPTHELVASTQQLRPTGLAVRTPGPGRLDELIRAHHEAFPPKMPSAAQDSPSFSEMPRGSRVPTEGLRVLRYKSPTPPPADSPWPLAMLLPLSAHIALEDGLTWCVAMHRMLISRLGDGAPAIVTGHYARGASQPANRVAVQYLPPTLLSHRAESGDFPHGAIALLLPASIAAEDRGEIVRALNSPRLGLWSSAGRVTLGTPLRIDASQFWPTPQPGWRRQWRTLDGMVPETRRQPRHELLGAWGFPQSALLSVGHVFREELALTRANTYWETVSVVTDRGVQILGTHLIPDSEVSRYVHKVPRSIGVVQPYSAQLDLADLVNDRALLALGQARHLGGGLLVPMDSPEVS
>NZ_LN997841.1|WP_055345782.1|2414568_2415768_+|type-I-U-CRISPR-associated-protein-Cas7
MTDLTYSDLEAACSAGGASVLSSVTELAPAAGPQAGIAPARYVQGRDGTYAYETRFIDGEPSSVVVVDSKASQLNRVEDAISLAIEEGDASLSRMPSIRVDYETLSATDYQLPHRFSDGHIRFGTVDGEVTTKHPAYVAARNASPANARALLELSPVSLAFGAWDSTRKAHQARFRSCLVGEIIGQLADQTEAGRKPPRRGSARKDDIAPSVQLNEKDMLTLLATQEDEMSPTTVDKITKDAKKAKNKPTSASVLGLGAIPPSLDGLGFVSCRRIIRSHVLSFSALRQLRFGADNAGNVACRALLAALSLHGLALSDQELELRANCDLVEAGDPVVTLDGRRGTHTELEPLVPEVTGPILATAIERAVATAGIRWDGQVLEVTGNPIILAGATADADED
>NZ_LN997841.1|WP_097775951.1|2412764_2414039_-|threonine-ammonia-lyase-IlvA
MTTTEVSTLAHLVDQAAEGLAGVARVTPLQYNERISSTSGCRVWLKREDLQPVRSYKLRGAYTFISKLSDDEKRAGVICASAGNHGQGVAWACARLGITGTVHVPSTTPRQKRDRIRFFGGDHVRLVVGGDTYDDAARAAQVEADRTGATMVPAFDDPLIASGQGTVARELVEQLDHAPDVLVVPVGGGGLLSGCGAWMRENHPETRIIAVEPAGAAGLAAAMDAGRPVRLDHIDSFVDGAAVARVGDFTFKIARQLAPDLIAIPEGQVCTEMLSMYQVDGIIAEPAGALAASALSVHPMDTTLGIDPSQEIAIIVSGGNNDVSRYAEVVERSGVHEGRRRYFLVNFPQEPGALRRFLNEVLGADDDIIVFDYTKHSNRDTGPALVGIELGDPTNFAELWTRMEESPLNVEVLEPDTAIYRMLV
>NZ_LN997841.1|WP_055343475.1|2412002_2412290_-|DUF2249-domain-containing-protein
MTDLPITQTHHCTCAEGDTNTPELDARAIPHAIRHAAILGALQGLGHNESMILVAPHNPLPLLDQIDSMWPDVFSLEYVQEGPDAWKIRFTRVAA
>NZ_LN997841.1|WP_060761331.1|2410986_2411997_-|helix-turn-helix-domain-containing-protein
MDGQTGPVRRAADLGVGATDGAHPSDRGAPLDPQCQRLMDALLTTPGPMTVAQLGADAEMRPNTVRFHLAHLGDAGLVSGVSARTTTRGRPGVLYRATARAFDSGPQHPRLLTEVLMHHFLAEAATPPPSVEGPQRPTTVWERARRAGRAWSSHVETLPGGSPAHGGAGPEHVTDGTAKFDALLTQLGNWGLAPNRIRDPGVPDGSAVPDESAAASTHSPVGSTIGPGPVSPDPAAAQRDHLPDRIRIGLNRCPFAHEASECPDLVCGVHAGIIDGLLAQLGGSWRVARLTPHASAGQCLLDAELTHPALQAPPCPAAAYPDSVHRAGRGGTTPRA
>NZ_LN997841.1|WP_013160292.1|2427622_2428129_+|hypothetical-protein
MIENPGQTNNQPQSDDTERPEVRLVPVQLEINGSYALQLEDDKKFHPVAQDIVGLCELLVRRSEDLGAPLLPSIDQSDSANEVALANAAPFPIISDRYGTLEVPVDMAGFLKSMDESTPYTGELLGTDLMHIGQMMKELSIKTGIQWVPMPVGKAENGELGTMTPDQQ
>NZ_LN997841.1|WP_013160291.1|2428163_2428679_-|hypothetical-protein
MSDTPRPSHDPRPKVTLRTVLIAIGVVLVVLIAGAIVVTTRNASTPDTNPSPVAPAAVSTMSSGAVASRAAMMEEEKPDSEHVVEFRATTNRPGFVVYRVTDGEGTRADMTQSWSHEERVKNLDGVFLKVKSLSGGDADAEVSCQILVDGQVWGSDSGSGRGAFSKCLLRG
>NZ_LN997841.1|WP_063493950.1|2430121_2431123_-|zinc-binding-alcohol-dehydrogenase-family-protein
MHAVVTRDGGPLDGPNSLVDATIDAPAAPEGHDLLVEVHATSVNPVDTKVRSGGKPSDGKVLGWDAAGVVQAVGPEVTLFAPGDEVFYAGDLTRAGSDAELQLVDERIVGHKPHTLDFAAAAALPLTSLTAYEALFDKLRLTADSSGTLLVLGSSGGVGSVLIQLAKQLTHVTVIAAASREDSTQWAVDLGADHVLNYHDDDFADQIVELAPGGVDDVFSAHSRGQIPFFIKVLRPFGQIVAIDDEPELDYYALKNKALTWHWEFMFARSMFHAPDLIRQHEILERIAELVDTGRVRTTLTRALQPFDATQLREAHRVVESGHALGKIVVARS
>NZ_LN997841.1|WP_143828470.1|2431249_2431489_-|hypothetical-protein
MSTTPDTEPTTTGRAHEKITSTELVPIAPAVKHRLSATPPATRTSPSRGHLEALREQLAQGDLSIDDAARLTREYIDNI
>NZ_LN997841.1|WP_013160287.1|2431581_2432331_-|HNH-endonuclease
MAHHRSAGWLALAAFVAASVLVGCDPPATTGSPSTSASSSVATSTPTPSITQTSAAGEAVATGDAEAVRQLLNTLPVKGRAPKTGYERSEFGTAWKDVDHNGCDTRNDILARDLTDKVYKPGTHDCVVASGVLHDPYTGTTIHFTRGQNTSTAVQIDHIVALSDAWQKGAQQLSGDLRTQLANDPLDLLAVDGPTNQQKSDGDAATWLPPNKAFRCTYVTHQVQVKAKYSLWVTQAEKAAITNQLGTCS
>NZ_LN997841.1|WP_013160286.1|2432788_2433064_+|hypothetical-protein
MDQPRVPLTTSYEMLEVLTTKFGALLDGYEAQGVRAFEEAGEPYDALGLLLSDLHFKGVKIPKEYADKIWSITDPEDVEDFAMYLGPRPKA
>NZ_LN997841.1|WP_063493849.1|2433460_2434777_+|anaerobic-C4-dicarboxylate-transporter
MIWVHLLILLIFVFLGSRLGGVGIGLAGGAGVLVLVATGLHTDAAKDVPWSVIGIIIPVICTIAALQVAGGMDYLVHLTEVLLRRHPKQITYLAPFVTFMLSLLCGTGHTAYSVIPVIVDVAKEHDVRPSRPLSIAVVASQVAVASSPISAATVAMTTVVEPMGIGYLQVLAVTIPTTFIGCAVGAIVASRQGKELKDDPIYQEREAKGLVSHSAAAAAPDFKPAPSAIPSLLIFLASLVVIVVWATISSKQLGIMSNPPINSSSAIMVIMMTTAAIICVLSRKPVSEVTTQSTFRAGMTAAICIMGVAWLGTTFFNNYMSQITTVGSSLLHQVPWLYAVILYFCAPLLFSHAATTAAFMPIAAKIGLTATTMLACYPAVANYYLLPNYPTTVAAIEMDDTGSTRVGRFVLNHPFVIPGTVSIAVAVALGFFWAPIVA
>NZ_LN997841.1|WP_063493951.1|2435036_2438177_+|DUF3427-domain-containing-protein
MAPGLYETPLTEELQARVERTGLEATSKPIPAERRDAALSGSVQRTLREHLSALPEAPRKAVYTTNEILRQIAGPSAQLVTDSRGDPLELQSLTDGRPRYATRPLTPLNQSTLITNARRDESLAQTLNLELATADRVDLLCAFVKWSGIQSIMDTLAMLHEQGVPVRLLTTTYMGATDATAIHRLADELGFQVKVNYNTGTTRLHAKSWMIYRNSGFHTAFIGSSNLSHAAMVDGLEWNVRVSAVNEPALFSKLGTAFDTYWDDPKFEPYLPDRDDERLATSLKQAVAQPGRHFDAAFLDIQPQPHQRIMLDDLAHERQQDFHRNLVVAATGTGKTVLAALDYLRLCGDKPGSLSLLFVAHRKEILEQARSTYAHVLNDANFGELLVGGEHPTEHRHVFASVQSLSRMNLDALDPTAFDVMVIDEFHHAEAATYRRILDHFQPRELLGLTATPERADGVNVASFFGDRIASELRLWDALDGDLLAPFHYFVQWDDTDLRGVKASGGEYQAGELSRLYTDNDGRSRLVLAAMRHRILDPTRMKALAFCVSVEHAHYMADVLSQAGVPSVALSGQSSREFREAAIRDLREGRLACLCTVDLFNEGIDIPSIDTVIMLRPTQSATIFLQQLGRGLRRAPGKSVLTVLDFVGHQREDFSFEPRLRALTGQGRKQLVDSVEKGFSELPAGCEIQFDKMSQKEVLKNVKRQLATTTLRLVNEFADYARRSASPTEYSLRRFLAESGLTLGSIFGRSKFRGEPVEMTFIRHRAGLAATIDVSPTGTYLRGRVRNFAHVDDPARAQAYVALSSPQGPQWDDLGPMQRIAAEMLFYSVWPKGRDQDDQLIGSIRDGLDVLRAHGWFSDELREVMESSVDASRAVFERPGGNLAGTPLVVHGTYRREELLAAIGVGRADGDARMPGDVREGVVWVESTGIGALSVQLEKDSDSFTDTTMYADYAINDTLFHWQSQSATTPGSSSGRRLLGEHAQSFDLALFVRQRGNDDLGKGAPYTFLGLVDLVSYSGSKPISITWRLRRPMPQGLYLAARAAAT
>NZ_LN997841.1|WP_048735580.1|2438177_2438471_-|hypothetical-protein
MLDVDGIADALRRDLLPLLSEAGRFILWSPLEAGDPEFAIYLGLQFALLDEVRIPEPLLEAIGVALDDPAFDPDLRPEATAWCAQLRSGDAADRNLP
>NZ_LN997841.1|WP_063493850.1|2438844_2439267_-|hypothetical-protein
MMGTIVSFLVVGGLILWVLVDIHQNAKEEKAKKARIQAREDKLEARADAEYEYQQALRLAELRLLEQQRINEALASPDDLDAILAQLERDAALDQAMGTEAMLNDGVAPASRSASPQRRREAASLRCAKCGQARCSHVWR

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Crispr_ID: NZ_LN997841_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN997841_3

2476270-2476376

Orphan

Consensus_repeat	Method
GGCGCGGTCGATTTTCTGCCGGGTGATCTGCGGCGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN997841_3

>merge|NZ_LN997841|3|2476270-2476376|CRISPRCasFinder
GGCGCGGTCGATTTTCTGCCGGGTGATCTGCGGCGGCTGGAGCTTGCCCTTGGCGGCCACTGATCCGAAGAGGCGCGGTCGATTTTCTGCCGGGTGTTCTGCGGCGG

>NZ_LN997841|3|3|2476270-2476376|CRISPRCasFinder
GGCGCGGTCGATTTTCTGCCGGGTGATCTGCGGCGG	CTGGAGCTTGCCCTTGGCGGCCACTGATCCGAAGA
GGCGCGGTCGATTTTCTGCCGGGTGTTCTGCGGCGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN997841.1\|WP_063493853.1\|2467423_2470492_+\|DUF4981-domain-containing-protein	unknown	unknown	gnl\|CDD\|236673
NZ_LN997841.1\|WP_063493854.1\|2486301_2486736_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	unknown	unknown	gnl\|CDD\|182350
NZ_LN997841.1\|WP_055344186.1\|2482500_2483145_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_LN997841.1\|WP_048769768.1\|2477586_2479608_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379050
NZ_LN997841.1\|WP_063493855.1\|2486711_2488031_+\|Y-family-DNA-polymerase	unknown	unknown	gnl\|CDD\|176454
NZ_LN997841.1\|WP_053085385.1\|2484316_2484823_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340879
NZ_LN997841.1\|WP_048769680.1\|2460976_2462644_-\|IS21-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_LN997841.1\|WP_171035501.1\|2464979_2465303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_053085387.1\|2484812_2486210_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|372509
NZ_LN997841.1\|WP_048768940.1\|2473186_2474494_+\|ISL3-like-element-ISPfr4-family-transposase	unknown	unknown	gnl\|CDD\|376574
NZ_LN997841.1\|WP_036942786.1\|2470514_2471903_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225121
NZ_LN997841.1\|WP_013160161.1\|2471948_2472944_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|187558
NZ_LN997841.1\|WP_155488382.1\|2474973_2476158_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN997841.1\|WP_048769678.1\|2460170_2460980_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|366760
NZ_LN997841.1\|WP_048769776.1\|2482170_2482416_+\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_LN997841.1\|WP_080516180.1\|2466121_2467075_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_LN997841.1\|WP_041704400.1\|2465368_2466160_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|372671
NZ_LN997841.1\|WP_027588232.1\|2483674_2484202_+\|dihydrofolate-reductase-family-protein	unknown	unknown	gnl\|CDD\|223340
NZ_LN997841.1\|WP_048769774.1\|2481609_2482167_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273359
NZ_LN997841.1\|WP_027588231.1\|2483141_2483531_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN997841.1\|WP_063493853.1\|2467423_2470492_+\|DUF4981-domain-containing-protein	gnl\|CDD\|236673	PRK10340, ebgA, cryptic beta-D-galactosidase subunit alpha; Reviewed.	0
NZ_LN997841.1\|WP_055344186.1\|2482500_2483145_-\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.4026e-07
NZ_LN997841.1\|WP_048769768.1\|2477586_2479608_+\|AAA-family-ATPase	gnl\|CDD\|379050	pfam13175, AAA_15, AAA ATPase domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily.	2.23114e-10
NZ_LN997841.1\|WP_063493854.1\|2486301_2486736_+\|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit	gnl\|CDD\|182350	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit.	4.03698e-34
NZ_LN997841.1\|WP_048769680.1\|2460976_2462644_-\|IS21-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.02153e-18
NZ_LN997841.1\|WP_053085387.1\|2484812_2486210_-\|AAA-family-ATPase	gnl\|CDD\|372509	pfam13166, AAA_13, AAA domain. This family of domains contain a P-loop motif that is characteristic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.	8.53122e-39
NZ_LN997841.1\|WP_048768940.1\|2473186_2474494_+\|ISL3-like-element-ISPfr4-family-transposase	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	3.14238e-73
NZ_LN997841.1\|WP_036942786.1\|2470514_2471903_+\|MFS-transporter	gnl\|CDD\|225121	COG2211, MelB, Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism].	3.17268e-76
NZ_LN997841.1\|WP_013160161.1\|2471948_2472944_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|187558	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	1.05593e-127
NZ_LN997841.1\|WP_053085385.1\|2484316_2484823_-\|hypothetical-protein	gnl\|CDD\|340879	cd17321, MFS_MMR_MDR_like, Methylenomycin A resistance protein (also called MMR peptide) and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial, fungal, and archaeal multidrug resistance (MDR) transporters including several proteins from Bacilli such as methylenomycin A resistance protein (also called MMR peptide), tetracycline resistance protein (TetB), and lincomycin resistance protein LmrB, as well as fungal proteins such as vacuolar basic amino acid transporters, which are involved in the transport into vacuoles of the basic amino acids histidine, lysine, and arginine in Saccharomyces cerevisiae, and aminotriazole/azole resistance proteins. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. For example, MMR confers resistance to the epoxide antibiotic methylenomycin while TetB resistance to tetracycline by an active tetracycline efflux. MMR-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.53828e-06
NZ_LN997841.1\|WP_048769678.1\|2460170_2460980_-\|ATP-binding-protein	gnl\|CDD\|366760	pfam01695, IstB_IS21, IstB-like ATP binding protein. This protein contains an ATP/GTP binding P-loop motif. It is found associated with IS21 family insertion sequences. The function of this protein is unknown, but it may perform a transposase function.	1.41498e-56
NZ_LN997841.1\|WP_048769776.1\|2482170_2482416_+\|EamA-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	0.000106259
NZ_LN997841.1\|WP_080516180.1\|2466121_2467075_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.89824e-67
NZ_LN997841.1\|WP_041704400.1\|2465368_2466160_+\|IS481-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	5.74345e-23
NZ_LN997841.1\|WP_027588232.1\|2483674_2484202_+\|dihydrofolate-reductase-family-protein	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	3.33606e-16
NZ_LN997841.1\|WP_048769774.1\|2481609_2482167_+\|hypothetical-protein	gnl\|CDD\|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	4.84894e-05
NZ_LN997841.1\|WP_063493855.1\|2486711_2488031_+\|Y-family-DNA-polymerase	gnl\|CDD\|176454	cd01700, PolY_Pol_V_umuC, umuC subunit of DNA Polymerase V. umuC subunit of Pol V. Pol V is a bacterial translesion synthesis (TLS) polymerase that consists of the heterotrimer of one umuC and two umuD subunits. Translesion synthesis is a process that allows the bypass of a variety of DNA lesions. TLS polymerases lack proofreading activity and have low fidelity and low processivity. They use damaged DNA as templates and insert nucleotides opposite the lesions. Pol V, RecA, single stranded DNA-binding protein, beta sliding clamp, and gamma clamp loading complex are responsible for inducing the SOS response in bacteria to repair UV-induced DNA damage.	4.40138e-142

>NZ_LN997841.1|WP_155488382.1|2474973_2476158_-|hypothetical-protein
MSAILEVEHSIAERRGGKVAQSEQAREVARRLGLVSHPTLDQLAEAVALFAPLGWAMCGRWHMEGTLRVLRQAGNGATDDELDEAITDVWNNENATLLKHAAAPMRRWSNSHYPFKQLVWDRVSFIEKAIEHHFAGAYEASTPIILAQIDGMSRDLTGQSFFSKGSNDPYLDDETIAGMETNLPVVRALFSEDVRPTGDYGKVSRHGVLHGRDLGYATRVNSTKTIVLVAALAEYLPKIADNAGAQLRRQYEDGVVGSTELDELGRLVDDRQVPELLNFAYDFDTEYLNAVLLNPAPFNARRQLAAVAHKHGLDPEAFTLDEDQTGWRWHYTIPAGQTLGYAARPSTSSERRHPDVWRWDDPATPGTFPWNDSTGWRSDDDFPRSPNWEPRLVI
>NZ_LN997841.1|WP_048768940.1|2473186_2474494_+|ISL3-like-element-ISPfr4-family-transposase
MSDATFACPDLTKFCRLDDLGLVVTGQRIEPDRAVLACRVVDDDRWCRGCGREGSPRDSVTRELAHAPQGWRPTTLVVTVRRYRCTGCTRVWRQDTSAAAEPRAKLSRAGLRWALEGIVVQHLTVARVAEGLGVAWNTANDAVLAEGKRLLINDPARFDGVKVIGVDELVWRHTRRGDKYVTVIIDLTPVRDGTGPARLLDMVEGRSTQAFKSWLADRPQSWRDAVQVVAMDGFTGFKTAAVEELPDVVTVMDPFHVTRLAGEALDVCRRRVQQAIHGHRGMKGDPLYSARRTLCTGADLLTDKQATRLRSLFADDNHVEVEATWGVYQRMIAAYRHEDRSRGRELMAKLIDDLSAGVPTVLVEITKLGRTLKKRADDVLAYFDRPGTSNGPTEAINGRLEHLRGSALGFRNLTSYIARSLLETGGFRPQLHPRL
>NZ_LN997841.1|WP_013160161.1|2471948_2472944_+|UDP-glucose-4-epimerase-GalE
MSWLVTGGAGYIGSHVVRAFIEQGITPIVVDDLSSGHREFVPDGVDFVEGQVQDTSLLERTMREHDVEGVMHIAGYKYAGVSVARPLHTYSQNVQGTAAVLEAMQRVGVSRIVFSSSAAVYGTPDVDLVTEDQPTAPESPYGQSKLIGEWLLADQARALELTDGATPLQHVSLRYFNVVGSGTDEVYDTSPHNLFPLVIEALIEGRTPRINGTDYPTPDGTCVRDYVHVADLATSHVAAATAMAEGRELRPVYNLGSGDGLSVREIMDAMQRGTGHTFEPVIGERRPGDPARIVANGDAAARDLDWRMRHSIDDMVTSAWQARTAHPDISE
>NZ_LN997841.1|WP_036942786.1|2470514_2471903_+|MFS-transporter
MPTHAASSGKTYLTWGNKIGYGSGDIAGNVVYTFLSAFLMIYLTDQMGLNAGVIGTLMMVAQLFNGVTDIGFGALLDRTHTRMGKARPWMLWPYIGCAVTLVASFAIPGGLSETGKYIWFFLAYTLLNSVFFTANNIAYSALTALITRNSAERVQMGSIRFMFAFTTSMLIQTFTVQGVRMLGGGADGWRAIAIIYAVIGLAVNTISVLSVKELPPEELDEGHDPAAAERYSFKEGARILLANKFYLIILVIYLVQQIFTATLNMGIYFMAYVLGDATRLGAFAWAINIPLIIGLLFTPVLVKRYGQMYRLNIWGYVVAVLGRLGVVAGGYMGSIPLMIASSAIASLGMSPLQGTLNALIAEASEYTFLRTGKHIDGMMFSCTTLGVKIGGGVGTALAGWLLAASGYVSNATTQSSSAIHMLYFMYLWIPAIANLIILAFLTRLDVEKANRALRTSADRVTA
>NZ_LN997841.1|WP_063493853.1|2467423_2470492_+|DUF4981-domain-containing-protein
MSIPKHHQGLEVLHENTLAAHAYFVPASAAVTDVVTARESSDRVQLLNGQWDFRYHHSVNDLDEAFMDPGCTVEGFAPITVPGTWQHQGYDAHQYTNVRYPIPLDPPHVPVDNPCGAYRTTFDHHADAAAPDTTLVFEGVDSCLYVWVNGHYVGYSQVSHATSEFDITEALVEGTNHMAVLVFKWCDGTYLEDQDKFRTSGIFRDVYLVDRPTRHLFDYFTTTQIHEAGATVRLRASYVGGPVETRATLLGADGTTVASGVLAEANDARGYSHAVELHVNRPRLWNPEHPELYTLLLEMPDEVVTDQVGLREVSIDDVVLRLNDCPVTLRGVNRHDSAPATGPTVDVAHMRRDLELMVRHNINAVRSSHYPNDPRFYQLCDQYGLLVMSEADNESHGTQAQFLADESWDNVVEHWNELIADSPDWTEATLDRVQRCVQREKNRPSIFSWSAGNECAYGCTLEVSLAWMKEFDPDRVTHYESAFYRNSKRSYDYSNIDLYSRMYPSQQEMLDYLAGDPDKPLVLVEYCHAMGNGPGDLEDYWQLIHTDPRLCGGFVWEWCDHAVLADHTDDGRPCYLYGGDSGEVIHDGNFCVDGLVWPDRRPHPGLLELKNVQRPARVVAHDPGAGMLTLRNDLDFTNLDEVVDLSWELVCDGIVLDRGDLSFTRPVPPHTETQVTCRPQLPRVGRCHLRVTQRLRVGDAVRAAGQELGFDEVAVPVADPRNQQSVQLLEAPPGAVSPAVEQDPSAITVRGDGFQYRFDTGTGMPTSMLVGDQEMFTAPAEVNIWRAPTDNDRRIRLEWERARYPYAAVRAHECSAQTLDGSVVVRARMTLDAATIQPILRLDASWTIDVAGRLRCQMDVTRTPEFPTLPRLGLRFFLAPELDQASWVGLGPGENYPDKRQASRHGHFTSSIDGLFVDYLRPQENGSRGDCDWVRVEQADAARGLTVTSPRPFSFNASRITQEQLSITRHDVELDPDDQVVLCIDHAMAGIGSNSCGPELLARYRVDDETYHVDLVLAPTRR
>NZ_LN997841.1|WP_080516180.1|2466121_2467075_-|MurR/RpiR-family-transcriptional-regulator
MTAPREVAPDSTVPSRLDDVSSQPADRDTSPNSTLLVERIRRARPSFSAMETAVADHLLSDPSAVVSATTAELAKAAGVSQASVVRFARSLGYEGLPALRLSLARELTRLDVEHELSGVARGRIDASDSLHDLAHKIGFHEARSIEDTVSGLDLTCLDEVAHAIAARRPVTVLGVGASGLVAEDLCQKLQRIGQQCQFTSDTHLQLVQAAMRTPQDVVIGISFSGRTVETHKALALAANAGALSVAITGNPDSPIGQVVSHVLTTTAREDELRIGALASRMAQLAVVDVLFARIAQLRFDDLDAALAVLPRDVVNAG
>NZ_LN997841.1|WP_041704400.1|2465368_2466160_+|IS481-family-transposase
MTHANAPLTPEGRRRLAVLVVEQGWSLRRAAERFQCSPATVKRWADRYRAGLPVRRPKPKRYEVAAPGQLVHVDIKKQGRIPDGGGWRAHGRGSMQDRHAGVARDKAARAGAAGSRGYRYLHHAVDDHSRIAYSEILDDERRETAAGFWTRANAFFAGLGVTVTAVMTDNGSCYRSGAFADALGDEVKHKWTRPYRPQTNGKVERFNRTLAVEWAYAKPYASEAERAAAYETWLHHYNHHRPHTGIGGQTPSARVHNVTGKYS
>NZ_LN997841.1|WP_171035501.1|2464979_2465303_+|hypothetical-protein
MEDVPDPQVPAKAQRRTYTARYKAKVLAEYEACDREGKGALLRREGLYTSLISSWRDQRDRGALEALGRSSGAAPATAAEKEAARLRRENERLTGELAVLPREVVNG
>NZ_LN997841.1|WP_048769680.1|2460976_2462644_-|IS21-family-transposase
MGSRVQLYADIRHDARVDGLSIRELARKHGVHRRTVRQALAAAEPPPRKRPVRTAPRLDPYKPAIDEMLTYDLTAPRKQRHTATRILARLRDEHGATDLSYSTVRDYVRVRRAQIDLEAGRRVEAMVPQDHAPGAEAEVDFGEVYVILDGVKTKCHMFVYRLSHSGKAIHRVYPTGGQEAFLEGHIEAFHALGGIPTRHIRYDNLTSAVVQVIHGGNRLRDENERWVLFRSHYGFDAFYCQPGIDGAHEKGGVEGEVGWFRRNHLTPMPEVATLDELNDKIRAWEHDDNTRRITGHANTIGQDHHAELPHLAPLPADDFDPGLILHPRVDRSALITVRMVKYSVPAHLIGQRVRVSLRASCVVVFEGRTVVATHPRLGTRGVTRVELDHYLEVLRHKPGAFPGSTALAQARAAGAFTAAHDAFWAAARKTSGDVAGTQALIDVLLLHRSLPSDAVIAGITSALSVGAISPDVVAVEARRHATTHTPAPASPTGGGTVVNLPPRRPTDPHQVIAHLPEDTRPLPTVTAYDELLRRRQPDPAPAPAETHHHTQTGTP
>NZ_LN997841.1|WP_048769678.1|2460170_2460980_-|ATP-binding-protein
MTTTSTSRPASLRRRQGLTEQAAQAAIDQACRRLRLPTIRAVVDDAVTAATKEQLTYQGFLAELLLAEVDDRDRRSTLRRIKSAGFPREKWLADFDFTANPSINPATINELATGDWIRRGDPLCLIGYSGTGKSHLLIALGTAAAEQGYRVRYTLATRLVNELVEAADEKQLTKTINRYGRVDLLVIDELGYMELDRRGAELLFQVLTEREEKNAIAIASNQSFSAWTDTFTDPRLCAAIVERLTYNATIIETGTNSYRLAHTRARQAG
>NZ_LN997841.1|WP_048769768.1|2477586_2479608_+|AAA-family-ATPase
MRVESATVSNFRCVIDSGQFDVEPDKTILVGINEAGKTALLKALQHASPTDDTATIDWLFDAPASMVDDIRRKNLDPATLAVARVVMRPEPKDLTGLSLPEGSDDVRLIMTAWMNGKRTYTVTGIPSAPTVGDAEKAILRLTGAMNKQSDEEAKQAAKAMLDWKDAQASDAAISGEVAAKLKTHLDAALPLFAEGSAAETHWDALSDTLKSALTLDKIGKHLAGRMPPFVYYSSYFAVRPRIHLNRLAEREASGEIDLEYDFGNLQLLKFLGFTAKELSDMASEAPEKGRNYDNDVNVQNQYKKELAAHERRVTERKRALQTAGARLTEEIQRVWNDDKLTIRLDVDGQYLQTLVEDELGIPVELDQRSEGFRWLVSFFVVFHAQAKDDLKDAILLLDEPGLSLHALKQQEFRKTVSRLAEGNQILYTTHSPFMVGSDELDLVRIVEMTDRKTGTKVHTRLAVDDPKSIYPLQAALGYDLAQSMFTHQKNLVVEGVTDLLYIEALNSAFAGQGGATLDDGIALVPAGSASKVVYYSTILTSQDLKVAALLDSDAAGNKAVEQEALWQLLTSKRILRTGDHVTGVQRAEIEDLLRVSLGLVARDECGWDSVSTIAAQPERPIMEILDAEHAEVSKWKLARAFVRWVANSGTHALTDDEQKSWVSLTTAANKALA
>NZ_LN997841.1|WP_048769774.1|2481609_2482167_+|hypothetical-protein
MLALTRLRRDPVVPADDGRPSDEAARPAGGRQWWADAGLASCMTAYYVFATTGFALGPVALTSLIIALTPAITMGWQLVSSRQVAGRDVLGFAVAIVGVCCYLVPLLSGHQQFPRHAIVIAAVAAGLAALVRALFTIVLWNRALRRVPLHAPRVNRLTFLIGAVLLLPVVLIPGAGGGAAWHHLG
>NZ_LN997841.1|WP_048769776.1|2482170_2482416_+|EamA-family-transporter
MALVVVATLVPNMLNTWASSRLHPTLNAIVGMLTPPLTGVLGWLWLGESLAGLQWFGMILTLVGIGVSVLRPAPARTGRDR
>NZ_LN997841.1|WP_055344186.1|2482500_2483145_-|VWA-domain-containing-protein
MTRSDLTHIYFLLDRSGSMQSIKSDTEGGFAAFIEQQRTTSEGECRVTLAQFDDRYELVYADRPIAEVPPLDLAPRGTTALLDAMGRLITDAGVALAKLPEDQRPGTVVVAVMTDGIENASREWTHPAVKALVEQQTNDYHWQFMYMGADQDAVEVGASIGVASDYSVSYGRGRARDVMAATSEKVAGLRRARRTDATARSAGYTVQERDDLSR
>NZ_LN997841.1|WP_027588231.1|2483141_2483531_-|hypothetical-protein
MPLDDAALTAIREALSQAQAAGAGRISDALPLLREAADRLAELIDDSLAEAVITDGTSLRAAGAQAGLSENAVGPRLAHTEALAGYATAQGRVTAAGVERARYDRETGTRRTPAIPPRPMRFTPRRRTS
>NZ_LN997841.1|WP_027588232.1|2483674_2484202_+|dihydrofolate-reductase-family-protein
MAIHFYTASSLDGFLATPDDSLEWLFRQDFDMDGPMAYPRFIEGIGALVMGSSSYRWLLAHQDGWEYSQPAWVFSHQELSAPEGADIRFARGDVAEVAPQILAAAGQKDVWVMGGGDLAGQFADAGLLDEVWVQFAPVTLGAGRPLLPRDLQLELVDVARNRDFVCTRFRVVQTR
>NZ_LN997841.1|WP_053085385.1|2484316_2484823_-|hypothetical-protein
MSIEDRLADAGLLWKNGRREGALLSVLVAVAPKRLAGDVGSIGGTTQNLASAVGTAVMGAVLVTTLGMGVGGAVAQHPELPESLVKQVDLDNANFISNDDLREVLARTPADPSQVDAAVTLNEEQRLRTLRLGFLLLASVSALAALPASRLPRYRPEDIPAEAVGSAR
>NZ_LN997841.1|WP_053085387.1|2484812_2486210_-|AAA-family-ATPase
MLRRLDVKDAWRSLDRGFWPADVPAGRKTVVYGHNGSGKSTVAELLLDLAEGDCPTKVVWEDESGKKHGVGAGGGSLSVPPAVFTRKWIDANLSAFLDGGSAPGIVTLGKEAIDAKAKEDQLAEDITKFDDKAKVTGKEHSTAKKEVDTLIGEIQTQIVSELQQFDGSYTKSRYSRPAVEKRLSGFTGTALNAEAHAAALRGLSEGPLPRVPDVEPAPAGVGGRLTGLSKLLGETPSRVAIGALETNPAAQTWVADGLALHEGHDHCLFCAGVITASRRDELARHFDQSWTQIRGKANALLHDVADEKKALEAWCERLPVPERLTSEFRSDYKDALKQVETAIDQRVAALEAIQAALKAKAYDPGATPEAPEWSVLDIASPAAELIGAVTRHNEQAERHDQVIAEQKQTVFDYLLGSRAEKYTTLRRKADKLAEAGQGPRPRHPRLVRVRHSTRHLQRERLRHVH
>NZ_LN997841.1|WP_063493854.1|2486301_2486736_+|translesion-error-prone-DNA-polymerase-V-autoproteolytic-subunit
MFGRVEVVGPVAAETAAVGVPMATESVPAGWPSPAADYFDGDVDLNEHLLVNRPASFIVRVAGDSMIGAGIFDGDELVVDRSLDPVDGDVVIAVVDNELTVKTLHLGESGPELRPENPAYPVIRPISDLRVWGVVTTCLHHLHH
>NZ_LN997841.1|WP_063493855.1|2486711_2488031_+|Y-family-DNA-polymerase
MPAPPAPLTPSPTGRPGRVMLVDVDSCYAACERVFHPELEGVPLVVLSNNDGCVVARSSEAKALGIEMGVPWFKLKAWADRHGVVARSSNYELYGSISGRIMAILGEYTPAVEVYSIDEAFLRLPGSPAELTEMGRRIRRRVLHDLGVPVSVGIGATHTLAKLASHGAKHSPTLGHVADLDAYRPGQVDAILEATPVADLWGVGRRLDSRLASMGIRTARQLRDADPAVMRRRFNVTLARTILELRGTDCITIDDRDADRTGQIMFSRSFSTPVTDPTQMHQVLAIYAQQAATRLRHQHSVAAGLWVFASTSWYVSPVHQVSLAGRLPHPADDPVTIVKAACDLLLDRIEPGRRYVRAGISLLDLAPAGAQPMLDPFSPDPRLARLGALVDRVNAACGRGALGLGWAGITAPPDWQMRREMLSNRGTTHWAELATVTAT

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN997841_2	2.8\|2424647\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424647-2424684	38	NC_041890	Propionibacterium phage Anatole, complete genome	3037-3074	0	1.0
NZ_LN997841_2	2.8\|2424647\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424647-2424684	38	KX620752	Propionibacterium phage E1, complete genome	3037-3074	0	1.0
NZ_LN997841_2	2.8\|2424647\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424647-2424684	38	NC_041892	Propionibacterium phage B3, complete genome	3037-3074	0	1.0
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	NC_041891	Propionibacterium phage B22, complete genome	28522-28557	0	1.0
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	NC_041894	Propionibacterium phage E6, complete genome	31338-31373	0	1.0
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	NC_041890	Propionibacterium phage Anatole, complete genome	28757-28792	0	1.0
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	KX620752	Propionibacterium phage E1, complete genome	28757-28792	0	1.0
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	NC_041892	Propionibacterium phage B3, complete genome	28041-28076	0	1.0
NZ_LN997841_2	2.2\|2424208\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424208-2424245	38	NC_041891	Propionibacterium phage B22, complete genome	24617-24654	1	0.974
NZ_LN997841_2	2.2\|2424208\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424208-2424245	38	NC_041890	Propionibacterium phage Anatole, complete genome	25487-25524	1	0.974
NZ_LN997841_2	2.2\|2424208\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424208-2424245	38	KX620752	Propionibacterium phage E1, complete genome	25487-25524	1	0.974
NZ_LN997841_2	2.2\|2424208\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424208-2424245	38	KX620754	Propionibacterium phage G4, complete genome	25650-25687	1	0.974
NZ_LN997841_2	2.2\|2424208\|38\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424208-2424245	38	NC_041892	Propionibacterium phage B3, complete genome	24747-24784	1	0.974
NZ_LN997841_2	2.13\|2425010\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425010-2425044	35	KU984979	Propionibacterium phage PFR1, complete genome	8314-8348	1	0.971
NZ_LN997841_2	2.13\|2425010\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425010-2425044	35	NC_031108	Propionibacterium phage PFR2, complete genome	8314-8348	1	0.971
NZ_LN997841_2	2.24\|2425805\|37\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425805-2425841	37	NC_041894	Propionibacterium phage E6, complete genome	16342-16378	1	0.973
NZ_LN997841_2	2.25\|2425878\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425878-2425913	36	KU984979	Propionibacterium phage PFR1, complete genome	13655-13690	1	0.972
NZ_LN997841_2	2.25\|2425878\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425878-2425913	36	NC_031108	Propionibacterium phage PFR2, complete genome	15224-15259	1	0.972
NZ_LN997841_2	2.27\|2426020\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426020-2426055	36	KU984979	Propionibacterium phage PFR1, complete genome	13106-13141	1	0.972
NZ_LN997841_2	2.27\|2426020\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426020-2426055	36	NC_031108	Propionibacterium phage PFR2, complete genome	14675-14710	1	0.972
NZ_LN997841_2	2.33\|2426447\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426447-2426482	36	NC_041890	Propionibacterium phage Anatole, complete genome	12157-12192	1	0.972
NZ_LN997841_2	2.33\|2426447\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426447-2426482	36	KX620752	Propionibacterium phage E1, complete genome	12157-12192	1	0.972
NZ_LN997841_2	2.10\|2424793\|37\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424793-2424829	37	KU984979	Propionibacterium phage PFR1, complete genome	20463-20499	2	0.946
NZ_LN997841_2	2.10\|2424793\|37\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424793-2424829	37	NC_031108	Propionibacterium phage PFR2, complete genome	22032-22068	2	0.946
NZ_LN997841_2	2.33\|2426447\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426447-2426482	36	NC_041892	Propionibacterium phage B3, complete genome	12160-12195	2	0.944
NZ_LN997841_2	2.6\|2424503\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424503-2424537	35	KU984979	Propionibacterium phage PFR1, complete genome	20974-21008	3	0.914
NZ_LN997841_2	2.6\|2424503\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424503-2424537	35	NC_031108	Propionibacterium phage PFR2, complete genome	22543-22577	3	0.914
NZ_LN997841_2	2.10\|2424793\|37\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424793-2424829	37	KX620754	Propionibacterium phage G4, complete genome	21072-21108	3	0.919
NZ_LN997841_2	2.32\|2426376\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426376-2426410	35	KU984979	Propionibacterium phage PFR1, complete genome	13725-13759	3	0.914
NZ_LN997841_2	2.32\|2426376\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426376-2426410	35	NC_031108	Propionibacterium phage PFR2, complete genome	15294-15328	3	0.914
NZ_LN997841_2	2.38\|2426805\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426805-2426840	36	KX620754	Propionibacterium phage G4, complete genome	28872-28907	3	0.917
NZ_LN997841_2	2.37\|2426733\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426733-2426768	36	MH669001	Mycobacterium phage EleanorGeorge, complete genome	34895-34930	5	0.861
NZ_LN997841_2	2.37\|2426733\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426733-2426768	36	MH727548	Mycobacterium phage Galactic, complete genome	36035-36070	5	0.861
NZ_LN997841_2	2.29\|2426163\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426163-2426197	35	NZ_CP047174	Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence	95576-95610	6	0.829
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP011869	Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence	221990-222024	7	0.8
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	CP047139	Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence	17425-17458	8	0.765
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	CP047137	Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence	16203-16236	8	0.765
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP021653	Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence	138405-138438	8	0.765
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP012688	Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence	138405-138438	8	0.765
NZ_LN997841_2	2.37\|2426733\|36\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426733-2426768	36	MH638294	Ralstonia phage GP4, complete genome	31479-31514	8	0.778
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP012940	Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence	1857969-1858002	9	0.735
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP012944	Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence	1864700-1864733	9	0.735
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP051295	Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence	1836612-1836645	9	0.735
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NC_017575	Ralstonia solanacearum Po82 megaplasmid, complete sequence	144366-144399	9	0.735
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP026308	Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence	144364-144397	9	0.735
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NZ_KY623659	Alcaligenes faecalis strain GZAF1 plasmid pGZAF1_VIM, complete sequence	106567-106601	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	519103-519137	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP054616	Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence	264827-264861	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP030864	Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence	416876-416910	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050095	Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence	81447-81481	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050083	Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence	136920-136954	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050100	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence	75029-75063	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NC_008381	Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence	278524-278558	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP025017	Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence	70420-70454	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP049733	Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence	128176-128210	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP053443	Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence	65762-65796	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP048284	Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence	79485-79519	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP054026	Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence	100601-100635	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP054036	Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence	226645-226679	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP053207	Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence	158829-158863	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050106	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence	386536-386570	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP025506	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence	378884-378918	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP016291	Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence	47134-47168	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050111	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence	386720-386754	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP030763	Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence	50492-50526	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP022668	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence	266991-267025	9	0.743
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NZ_CP050088	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence	523116-523150	9	0.743
NZ_LN997841_2	2.29\|2426163\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426163-2426197	35	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	15543-15577	9	0.743
NZ_LN997841_2	2.29\|2426163\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426163-2426197	35	NZ_CP032054	Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence	1036048-1036082	9	0.743
NZ_LN997841_2	2.29\|2426163\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426163-2426197	35	NZ_CP016560	Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence	692289-692323	9	0.743
NZ_LN997841_2	2.12\|2424937\|37\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2424937-2424973	37	NZ_LR594691	Variovorax sp. WDL1 plasmid 3	12933-12969	10	0.73
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NZ_CP026654	Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence	49116-49150	10	0.714
NZ_LN997841_2	2.28\|2426092\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426092-2426126	35	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	11073-11107	10	0.714
NZ_LN997841_2	2.30\|2426234\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426234-2426267	34	NZ_CP039426	Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence	72492-72525	10	0.706
NZ_LN997841_2	2.30\|2426234\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426234-2426267	34	NZ_CP039431	Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence	72493-72526	10	0.706
NZ_LN997841_2	2.14\|2425081\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425081-2425114	34	NZ_CP040819	Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence	17302-17335	11	0.676
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NZ_LN832562	Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence	280439-280473	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	MH727545	Mycobacterium phage DismalStressor, complete genome	46361-46395	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	KJ510412	Mycobacterium phage ZoeJ, complete genome	45740-45774	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NC_026598	Mycobacterium phage Milly, complete genome	46335-46369	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	AF068845	Mycobacteriophage TM4, complete genome	40999-41033	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	MH834601	Mycobacterium phage BoostSeason, complete genome	45936-45970	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	KX688047	Mycobacterium phage Marcoliusprime, complete genome	46361-46395	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NC_028759	Mycobacterium phage Mufasa, complete genome	45921-45955	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	MF140408	Mycobacterium phage DismalFunk, complete genome	46361-46395	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	KC787101	Mycobacterium phage 33D, partial genome	7434-7468	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	NC_003387	Mycobacterium phage TM4, complete genome	40999-41033	11	0.686
NZ_LN997841_2	2.22\|2425659\|35\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2425659-2425693	35	MF140411	Mycobacterium phage Findley, complete genome	46355-46389	11	0.686
NZ_LN997841_2	2.35\|2426592\|34\|NZ_LN997841\|PILER-CR,CRISPRCasFinder,CRT	2426592-2426625	34	MT778838	Rhizobium phage V1VFA-S, complete genome	31158-31191	11	0.676

1. spacer 2.8|2424647|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 0, identity: 1.0

cctgtcattcgcccattgggccgcttgagaagcttgat	CRISPR spacer
cctgtcattcgcccattgggccgcttgagaagcttgat	Protospacer
**************************************

2. spacer 2.8|2424647|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 0, identity: 1.0

cctgtcattcgcccattgggccgcttgagaagcttgat	CRISPR spacer
cctgtcattcgcccattgggccgcttgagaagcttgat	Protospacer
**************************************

3. spacer 2.8|2424647|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 0, identity: 1.0

cctgtcattcgcccattgggccgcttgagaagcttgat	CRISPR spacer
cctgtcattcgcccattgggccgcttgagaagcttgat	Protospacer
**************************************

4. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 0, identity: 1.0

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggcgtcgcacggcgg	Protospacer
************************************

5. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 0, identity: 1.0

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggcgtcgcacggcgg	Protospacer
************************************

6. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 0, identity: 1.0

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggcgtcgcacggcgg	Protospacer
************************************

7. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 0, identity: 1.0

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggcgtcgcacggcgg	Protospacer
************************************

8. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 0, identity: 1.0

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggcgtcgcacggcgg	Protospacer
************************************

9. spacer 2.2|2424208|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 1, identity: 0.974

ccgacgcttgcgtggagcagctcggcgacgtccttctg	CRISPR spacer
ccgacgcttgcgtggagtagctcggcgacgtccttctg	Protospacer
*****************.********************

10. spacer 2.2|2424208|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.974

ccgacgcttgcgtggagcagctcggcgacgtccttctg	CRISPR spacer
ccgacgcttgcgtggagtagctcggcgacgtccttctg	Protospacer
*****************.********************

11. spacer 2.2|2424208|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.974

ccgacgcttgcgtggagcagctcggcgacgtccttctg	CRISPR spacer
ccgacgcttgcgtggagtagctcggcgacgtccttctg	Protospacer
*****************.********************

12. spacer 2.2|2424208|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 1, identity: 0.974

ccgacgcttgcgtggagcagctcggcgacgtccttctg	CRISPR spacer
ccgacgcttgcgtggagtagctcggcgacgtccttctg	Protospacer
*****************.********************

13. spacer 2.2|2424208|38|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 1, identity: 0.974

ccgacgcttgcgtggagcagctcggcgacgtccttctg	CRISPR spacer
ccgacgcttgcgtggagtagctcggcgacgtccttctg	Protospacer
*****************.********************

14. spacer 2.13|2425010|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 1, identity: 0.971

ccgaccgccaagatgatcaatgagcggaagcacac	CRISPR spacer
cccaccgccaagatgatcaatgagcggaagcacac	Protospacer
** ********************************

15. spacer 2.13|2425010|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 1, identity: 0.971

ccgaccgccaagatgatcaatgagcggaagcacac	CRISPR spacer
cccaccgccaagatgatcaatgagcggaagcacac	Protospacer
** ********************************

16. spacer 2.24|2425805|37|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.973

ttcgcggtgcggtcggcaatgctggacgcgtgcccga	CRISPR spacer
ttcgcggtgcggtcggcgatgctggacgcgtgcccga	Protospacer
*****************.*******************

17. spacer 2.25|2425878|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 1, identity: 0.972

ctcacgcccggaacccatgccggaagatcagtcgcc	CRISPR spacer
ctcacgcccggaacccatgccggcagatcagtcgcc	Protospacer
*********************** ************

18. spacer 2.25|2425878|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 1, identity: 0.972

ctcacgcccggaacccatgccggaagatcagtcgcc	CRISPR spacer
ctcacgcccggaacccatgccggcagatcagtcgcc	Protospacer
*********************** ************

19. spacer 2.27|2426020|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 1, identity: 0.972

acggcctcgccgtcgcggctgatgctcgcatgcatc	CRISPR spacer
acagcctcgccgtcgcggctgatgctcgcatgcatc	Protospacer
**.*********************************

20. spacer 2.27|2426020|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 1, identity: 0.972

acggcctcgccgtcgcggctgatgctcgcatgcatc	CRISPR spacer
acagcctcgccgtcgcggctgatgctcgcatgcatc	Protospacer
**.*********************************

21. spacer 2.33|2426447|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.972

gcagctgctggtcgctttggtgcagggcatcctctc	CRISPR spacer
gcagctgctggtcgctttggtgcagggcatcatctc	Protospacer
******************************* ****

22. spacer 2.33|2426447|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.972

gcagctgctggtcgctttggtgcagggcatcctctc	CRISPR spacer
gcagctgctggtcgctttggtgcagggcatcatctc	Protospacer
******************************* ****

23. spacer 2.10|2424793|37|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 2, identity: 0.946

gacagcgcggtccgctcgatcatcggcgaccagccct	CRISPR spacer
gacgacgcggtccgctcgatcatcggcgaccagccct	Protospacer
***..********************************

24. spacer 2.10|2424793|37|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 2, identity: 0.946

gacagcgcggtccgctcgatcatcggcgaccagccct	CRISPR spacer
gacgacgcggtccgctcgatcatcggcgaccagccct	Protospacer
***..********************************

25. spacer 2.33|2426447|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 2, identity: 0.944

gcagctgctggtcgctttggtgcagggcatcctctc	CRISPR spacer
gcagctgctgatcgctttggtgcagggcatcatctc	Protospacer
**********.******************** ****

26. spacer 2.6|2424503|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 3, identity: 0.914

tgtagcaacagtgctccagcatgtcaagtgtgggg	CRISPR spacer
cgtagcaacagtgttccaacatgtcaagtgtgggg	Protospacer
.************.****.****************

27. spacer 2.6|2424503|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 3, identity: 0.914

tgtagcaacagtgctccagcatgtcaagtgtgggg	CRISPR spacer
cgtagcaacagtgttccaacatgtcaagtgtgggg	Protospacer
.************.****.****************

28. spacer 2.10|2424793|37|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 3, identity: 0.919

gacagcgcggtccgctcgatcatcggcgaccagccct	CRISPR spacer
aacgacgcggtccgctcgatcatcggcgaccagccct	Protospacer
.**..********************************

29. spacer 2.32|2426376|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 3, identity: 0.914

ggcgagttggctcggacctctggacaatttttgga	CRISPR spacer
gccgagttggctcggacctctgaacgatttttgga	Protospacer
* ********************.**.*********

30. spacer 2.32|2426376|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 3, identity: 0.914

ggcgagttggctcggacctctggacaatttttgga	CRISPR spacer
gccgagttggctcggacctctgaacgatttttgga	Protospacer
* ********************.**.*********

31. spacer 2.38|2426805|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 3, identity: 0.917

ggcgggtccgcgagattcgtcggcgtcgcacggcgg	CRISPR spacer
ggcgggtccgcgagattcgtcggtgccgcacggcgt	Protospacer
***********************.*.*********

32. spacer 2.37|2426733|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MH669001 (Mycobacterium phage EleanorGeorge, complete genome) position: , mismatch: 5, identity: 0.861

ttcgccgtgaagacccgcgaggcggagg-tcgcccgt	CRISPR spacer
ttcgccgtcaagacccgcgaggccgagactcggccg-	Protospacer
******** ************** ***. *** ***

33. spacer 2.37|2426733|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MH727548 (Mycobacterium phage Galactic, complete genome) position: , mismatch: 5, identity: 0.861

ttcgccgtgaagacccgcgaggcggagg-tcgcccgt	CRISPR spacer
ttcgccgtcaagacccgcgaggccgagactcggccg-	Protospacer
******** ************** ***. *** ***

34. spacer 2.29|2426163|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP047174 (Rathayibacter sp. VKM Ac-2760 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.829

--gtggtttcgacgcccttgtcggggccgtgcctgcc	CRISPR spacer
aggtgg--acgacgcccttgtcggggccgagccagcg	Protospacer
  ****   ******************** *** **

35. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011869 (Pseudonocardia sp. HH130629-09 plasmid pLS1-1, complete sequence) position: , mismatch: 7, identity: 0.8

gctcggcgacgccgccctggcgatgc---tgccgaccg	CRISPR spacer
ggtcggcgacaccgccctggcgctgctcgtgcgga---	Protospacer
* ********.*********** ***   *** **

36. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcgaacatca-----	Protospacer
********.******** ******     ****.

37. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcgaacatca-----	Protospacer
********.******** ******     ****.

38. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcgaacatca-----	Protospacer
********.******** ******     ****.

39. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.765

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcgaacatca-----	Protospacer
********.******** ******     ****.

40. spacer 2.37|2426733|36|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MH638294 (Ralstonia phage GP4, complete genome) position: , mismatch: 8, identity: 0.778

---ttcgccgtgaagacccgcgaggcggaggtcgcccgt	CRISPR spacer
gagtcggcc---aagacccgcgaggcggaggccgcacgg	Protospacer
   *. ***   *******************.*** **

41. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcggacacca-----	Protospacer
********.******** ******     **.*.

42. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcggacacca-----	Protospacer
********.******** ******     **.*.

43. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.735

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcggacacca-----	Protospacer
********.******** ******     **.*.

44. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.735

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcggacacca-----	Protospacer
********.******** ******     **.*.

45. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ttgaagcaggcgcccgcagcgccc-----catcgcccgg	CRISPR spacer
ttgaagcaagcgcccgccgcgcccgcggacacca-----	Protospacer
********.******** ******     **.*.

46. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY623659 (Alcaligenes faecalis strain GZAF1 plasmid pGZAF1_VIM, complete sequence) position: , mismatch: 9, identity: 0.743

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
acacccgccgcggttgaggccgaccttccagtgta	Protospacer
************.*.***********   *   *.

47. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
caccgacggcgccgccctggcgatgctgcacaagg	Protospacer
  .**.**.********************  *  *

48. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
agccgaggccgccgcccaggcgatgctgccgcccc	Protospacer
. .**. * ******** ************* **

49. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030864 (Streptomyces globosus strain LZH-48 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cgccggcgacgccggcctggcgctgctgctgcgca	Protospacer
  .*********** ******* ******.*  *.

50. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050095 (Rhizobium leguminosarum bv. trifolii strain 22B plasmid pRL22b1, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

51. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050083 (Rhizobium leguminosarum bv. trifolii strain 31B plasmid pRL31b3, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

52. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050100 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b3, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

53. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_008381 (Rhizobium leguminosarum bv. viciae 3841 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

54. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025017 (Rhizobium leguminosarum strain Norway plasmid pRLN5, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

55. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049733 (Rhizobium leguminosarum strain A1 plasmid pRL10, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

56. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053443 (Rhizobium leguminosarum bv. trifolii strain CC275e plasmid pRltCC275eC, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

57. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP048284 (Rhizobium leguminosarum bv. viciae 248 plasmid pRle248b, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

58. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054026 (Rhizobium sp. JKLM12A2 plasmid pPR12A205, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

59. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054036 (Rhizobium sp. JKLM13E plasmid pPR13E05, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

60. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP053207 (Rhizobium leguminosarum bv. trifolii TA1 plasmid pRltTA1C, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

61. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050106 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b5, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

62. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP025506 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvE, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

63. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016291 (Rhizobium leguminosarum strain Vaf10 plasmid unnamed6, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

64. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050111 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b1, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

65. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030763 (Rhizobium leguminosarum strain ATCC 14479 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

66. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022668 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR3, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

67. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050088 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b6, complete sequence) position: , mismatch: 9, identity: 0.743

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
cggcatcggcgccggcctggcgatgctgccggtcg	Protospacer
   *. **.***** ****************..**

68. spacer 2.29|2426163|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 9, identity: 0.743

gtggtttcgacgcccttgtcggggccgtgcctgcc	CRISPR spacer
cgggagacgatgccgttgtcggggccgtgcctgat	Protospacer
  **   ***.*** ****************** .

69. spacer 2.29|2426163|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032054 (Streptomyces clavuligerus strain F1D-5 plasmid pSCL1, complete sequence) position: , mismatch: 9, identity: 0.743

gtggtttcgacgcccttgtcggggccgtgcctgcc	CRISPR spacer
cgggagacgatgccgttgtcggggccgtgcctgat	Protospacer
  **   ***.*** ****************** .

70. spacer 2.29|2426163|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016560 (Streptomyces clavuligerus strain F613-1 plasmid pSCL4, complete sequence) position: , mismatch: 9, identity: 0.743

gtggtttcgacgcccttgtcggggccgtgcctgcc	CRISPR spacer
cgggagacgatgccgttgtcggggccgtgcctgat	Protospacer
  **   ***.*** ****************** .

71. spacer 2.12|2424937|37|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594691 (Variovorax sp. WDL1 plasmid 3) position: , mismatch: 10, identity: 0.73

gcctccagcggtggaaagagcggcagcgctacggacg	CRISPR spacer
tgctccaccggtggaaagagctgcagcgtccgggaga	Protospacer
  ***** ************* ******..  *** .

72. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026654 (Streptomyces dengpaensis strain XZHG99 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.714

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
ctgctcgccgagatcgaggccgacctgaaagaggc	Protospacer
 ..*.***** ******************* .

73. spacer 2.28|2426092|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 10, identity: 0.714

gctcggcgacgccgccctggcgatgctgccgaccg	CRISPR spacer
agcgggtgacgccgccctggctatgctgctcctcg	Protospacer
. . **.************** *******.  .**

74. spacer 2.30|2426234|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039426 (Citricoccus sp. SGAir0253 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gccggtgctcccgtcacgccggggcgttcttcgg	CRISPR spacer
gccggtgctcccgtgccgccggggaccgtggggg	Protospacer
**************  ********  . .   **

75. spacer 2.30|2426234|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039431 (Citricoccus sp. SGAir0453 plasmid unnamed2, complete sequence) position: , mismatch: 10, identity: 0.706

gccggtgctcccgtcacgccggggcgttcttcgg	CRISPR spacer
gccggtgctcccgtgccgccggggaccgtggggg	Protospacer
**************  ********  . .   **

76. spacer 2.14|2425081|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040819 (Paraoceanicella profunda strain D4M1 plasmid pD4M1A, complete sequence) position: , mismatch: 11, identity: 0.676

ttgaagcaggcgcccgcagcgccccatcgcccgg	CRISPR spacer
cccgcccttgcgccggcagcgccgcatcgcccgc	Protospacer
.. .  *  ***** ******** *********

77. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN832562 (Paracoccus aminovorans isolate JCM7685 plasmid IV, complete sequence) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtcaccgccgccatcgaggccggcctgaaggtcgc	Protospacer
..  ******* **********.******.  *

78. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MH727545 (Mycobacterium phage DismalStressor, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaaacgca	Protospacer
...* ** *************** ******   ..

79. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KJ510412 (Mycobacterium phage ZoeJ, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaatctca	Protospacer
...* ** *************** ******. ...

80. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_026598 (Mycobacterium phage Milly, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaaacgca	Protospacer
...* ** *************** ******   ..

81. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to AF068845 (Mycobacteriophage TM4, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaagcgca	Protospacer
...* ** *************** ******   ..

82. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MH834601 (Mycobacterium phage BoostSeason, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaagcgca	Protospacer
...* ** *************** ******   ..

83. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KX688047 (Mycobacterium phage Marcoliusprime, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaaacgca	Protospacer
...* ** *************** ******   ..

84. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_028759 (Mycobacterium phage Mufasa, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaagcgca	Protospacer
...* ** *************** ******   ..

85. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MF140408 (Mycobacterium phage DismalFunk, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaaacgca	Protospacer
...* ** *************** ******   ..

86. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to KC787101 (Mycobacterium phage 33D, partial genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaagcgca	Protospacer
...* ** *************** ******   ..

87. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to NC_003387 (Mycobacterium phage TM4, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaagcgca	Protospacer
...* ** *************** ******   ..

88. spacer 2.22|2425659|35|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MF140411 (Mycobacterium phage Findley, complete genome) position: , mismatch: 11, identity: 0.686

acacccgccgcgatcgaggccgacctgaaacgctg	CRISPR spacer
gtgcgcgacgcgatcgaggccgagctgaaaacgca	Protospacer
...* ** *************** ******   ..

89. spacer 2.35|2426592|34|NZ_LN997841|PILER-CR,CRISPRCasFinder,CRT matches to MT778838 (Rhizobium phage V1VFA-S, complete genome) position: , mismatch: 11, identity: 0.676

ccgagatcacagatgccgagctcatcaccattca	CRISPR spacer
ttccgatcgcagatgccgagcgcatcactgccct	Protospacer
..  ****.************ ******....*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

18164 : 75341

Mycobacterium_phage(33.33%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_055346432.1\|18164_19472_+\|transposase	ISL3-like element ISPfr1 family transposase	A0A2H4PDF8	Mycobacterium_phage	4.1e-169	67.8
WP_013162139.1\|19930_20791_-	EamA family transporter	NA	NA	NA	NA
WP_048768937.1\|20790_21675_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_044657715.1\|21698_22619_+	oxidoreductase	NA	NA	NA	NA
WP_013162142.1\|22641_23382_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_063493587.1\|23577_24885_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.4e-185	71.7
WP_048769063.1\|25051_25681_-	hypothetical protein	NA	NA	NA	NA
WP_013350246.1\|25677_26016_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_080970629.1\|26972_28706_-	AIPR family protein	NA	NA	NA	NA
WP_172797149.1\|30154_30493_-\|transposase	transposase	NA	NA	NA	NA
WP_063493589.1\|30515_30824_-\|transposase	transposase	NA	NA	NA	NA
WP_013160195.1\|30860_32168_-\|transposase	ISL3-like element ISPfr1 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.8e-169	68.1
WP_049770768.1\|32291_32939_+	hypothetical protein	NA	NA	NA	NA
WP_013160047.1\|32941_33286_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_144406077.1\|33812_34883_+	hypothetical protein	Q9HH70	Methanothermobacter_phage	1.6e-25	39.4
WP_013160045.1\|35055_36204_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.6e-31	29.8
WP_157761831.1\|36225_37830_+	S8 family serine peptidase	NA	NA	NA	NA
WP_013160043.1\|38008_38878_+	SdpI family protein	NA	NA	NA	NA
WP_048770065.1\|38988_39792_-	EcsC family protein	NA	NA	NA	NA
WP_013160041.1\|40250_41555_+	citrate synthase	NA	NA	NA	NA
WP_044635868.1\|41767_42376_+	LysM peptidoglycan-binding domain-containing protein	A0A1J0GVU2	Streptomyces_phage	5.6e-28	44.6
WP_063493591.1\|42690_44892_+	serine/threonine protein kinase	A0A1M7XTW9	Cedratvirus	9.1e-12	26.9
WP_055344330.1\|45437_46163_+\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_055344329.1\|46155_47019_+	Fpg/Nei family DNA glycosylase	NA	NA	NA	NA
WP_172797150.1\|47278_48814_+	gluconokinase	NA	NA	NA	NA
WP_063493592.1\|48991_49867_+	hypothetical protein	NA	NA	NA	NA
WP_055343632.1\|51291_52599_-\|transposase	ISL3-like element ISPfr1 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.1e-169	67.8
WP_048770132.1\|53302_54337_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_081233885.1\|54353_55100_-	hypothetical protein	NA	NA	NA	NA
WP_063493595.1\|55839_58878_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_121972283.1\|58874_60044_-	restriction endonuclease subunit S	A0A240FAT6	Liberibacter_phage	2.2e-33	48.0
WP_048770132.1\|60464_61499_+\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_063493598.1\|62771_64589_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	27.6
WP_060761526.1\|64585_65773_-	ABC transporter permease	NA	NA	NA	NA
WP_044657876.1\|65973_66963_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_138427884.1\|67200_68934_+	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	5.2e-63	36.2
WP_157761606.1\|68926_69880_+	aminotransferase class IV	NA	NA	NA	NA
WP_052809053.1\|70173_70854_-	hypothetical protein	NA	NA	NA	NA
WP_158487031.1\|72314_73919_-	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA
WP_013160063.1\|74066_75341_+\|tRNA	serine--tRNA ligase	A0A2K9L088	Tupanvirus	2.8e-66	35.8

DBSCAN-SWA_2

458275 : 513411

Mycobacterium_phage(41.67%)

integrase,transposase

attL 497193:497252|attR 511982:513417

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063493901.1\|458275_459556_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	6.3e-191	76.5
WP_013160232.1\|459900_460881_+	EcsC family protein	NA	NA	NA	NA
WP_063493660.1\|461508_462441_+	hypothetical protein	NA	NA	NA	NA
WP_155731226.1\|462395_462536_+	hypothetical protein	NA	NA	NA	NA
WP_081233895.1\|462556_463225_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-24	34.0
WP_036940993.1\|463221_464370_+	ABC transporter permease	NA	NA	NA	NA
WP_048769541.1\|464527_467782_-	DEAD/DEAH box helicase	E4WLZ5	Ostreococcus_tauri_virus	2.4e-40	29.4
WP_080516214.1\|469127_470051_+	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_063493635.1\|470153_471461_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.7e-181	70.8
WP_036940996.1\|471596_472316_+	hypothetical protein	NA	NA	NA	NA
WP_036940999.1\|472547_473351_+	deoxyribonuclease IV	NA	NA	NA	NA
WP_013162132.1\|473347_475354_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.4e-48	25.7
WP_080970581.1\|475393_477022_-	sugar porter family MFS transporter	NA	NA	NA	NA
WP_055343544.1\|477156_477954_-	TIM barrel protein	NA	NA	NA	NA
WP_048769427.1\|478445_479468_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_013162128.1\|479658_480231_+	isochorismatase family protein	A0A2K9L2K0	Tupanvirus	6.0e-16	34.9
WP_057374525.1\|480611_481631_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_063493661.1\|481766_482678_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_057374527.1\|482844_483756_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013162124.1\|483837_484818_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_013162123.1\|484819_485647_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.1e-33	40.0
WP_080516213.1\|486523_487390_+	PadR family transcriptional regulator	NA	NA	NA	NA
WP_013162121.1\|487602_489729_-	NAD(+) synthase	NA	NA	NA	NA
WP_013162120.1\|489896_491090_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_171035532.1\|491189_491639_+	ribose 5-phosphate isomerase B	NA	NA	NA	NA
WP_081233789.1\|491874_492942_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_013162117.1\|492947_494291_+	gluconate transporter	NA	NA	NA	NA
WP_013162116.1\|494404_495316_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_048769424.1\|495614_496832_+	MFS transporter	NA	NA	NA	NA
WP_049770830.1\|496850_497216_+	hypothetical protein	NA	NA	NA	NA
497193:497252	attL	NA	NA	NA	NA
WP_013162114.1\|497314_498622_+\|transposase	ISL3-like element ISPfr6 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.8e-188	73.0
WP_013162107.1\|499663_500245_-	recombinase family protein	A0A219YA40	Aeromonas_phage	7.7e-19	37.4
WP_013162108.1\|500241_501021_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_013162109.1\|501017_501350_-	hypothetical protein	NA	NA	NA	NA
WP_041704881.1\|501718_502192_+	Hsp20 family protein	NA	NA	NA	NA
WP_041704882.1\|502450_502909_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_080516165.1\|503065_505033_-	KUP/HAK/KT family potassium transporter	A7K9V6	Acanthocystis_turfacea_chlorella_virus	6.3e-73	31.2
WP_013162114.1\|505265_506573_-\|transposase	ISL3-like element ISPfr6 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.8e-188	73.0
WP_063493663.1\|506671_507157_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_013162095.1\|507740_508043_+	DUF4193 domain-containing protein	NA	NA	NA	NA
WP_036939336.1\|508046_508310_+	hypothetical protein	NA	NA	NA	NA
WP_044657895.1\|508787_510920_+	glycogen debranching protein GlgX	NA	NA	NA	NA
WP_013162098.1\|510989_511418_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_013162099.1\|511427_511901_+	hypothetical protein	NA	NA	NA	NA
WP_013162114.1\|512103_513411_+\|transposase	ISL3-like element ISPfr6 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.8e-188	73.0
511982:513417	attR	NA	NA	NA	NA

DBSCAN-SWA_3

653548 : 681961

Mycobacterium_phage(42.86%)

integrase,transposase

attL 652880:652896|attR 688593:688609

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
652880:652896	attL	NA	NA	NA	NA
WP_044658394.1\|653548_654967_-\|transposase	IS30-like element ISPfr9 family transposase	W5R8L2	Staphylococcus_phage	3.5e-33	36.3
WP_081233795.1\|655125_657000_-	toprim domain-containing protein	A0A2H4PDF8	Mycobacterium_phage	1.9e-63	69.3
WP_013161964.1\|657224_657449_+	hypothetical protein	NA	NA	NA	NA
WP_013161963.1\|657445_657856_+	hypothetical protein	NA	NA	NA	NA
WP_013161962.1\|657937_659257_-	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.1e-76	42.8
WP_013161961.1\|659232_659667_-	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	8.5e-23	47.6
WP_112317812.1\|659850_660303_-	hypothetical protein	NA	NA	NA	NA
WP_013161957.1\|661231_661573_-	hypothetical protein	NA	NA	NA	NA
WP_013161956.1\|661803_662397_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_049770861.1\|662498_663653_+	protein kinase family protein	A0A2K9L5D2	Tupanvirus	1.3e-12	28.9
WP_143828500.1\|663757_664171_-	hypothetical protein	NA	NA	NA	NA
WP_013161952.1\|664348_664639_+	hypothetical protein	NA	NA	NA	NA
WP_013161951.1\|664652_667151_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_049770860.1\|667370_669095_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_013161949.1\|669288_669765_+	VOC family protein	NA	NA	NA	NA
WP_041704279.1\|669865_670270_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013161947.1\|670476_671739_-	hypothetical protein	NA	NA	NA	NA
WP_013161946.1\|671800_672805_-\|transposase	IS481-like element ISPfr15 family transposase	NA	NA	NA	NA
WP_143828517.1\|673169_673412_+	hypothetical protein	NA	NA	NA	NA
WP_013161944.1\|673383_674691_-\|transposase	ISL3-like element ISPfr7 family transposase	A0A2H4PDF8	Mycobacterium_phage	5.9e-168	67.5
WP_143828499.1\|674952_675330_+	hypothetical protein	NA	NA	NA	NA
WP_063493679.1\|675463_676861_+	hypothetical protein	NA	NA	NA	NA
WP_013161939.1\|676900_677746_-	hypothetical protein	NA	NA	NA	NA
WP_146206037.1\|677916_679023_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_158304167.1\|679105_680293_-	putative DNA binding domain-containing protein	NA	NA	NA	NA
WP_063493680.1\|680689_681961_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.9e-159	67.3
688593:688609	attR	NA	NA	NA	NA

DBSCAN-SWA_4

776634 : 832251

Tupanvirus(18.18%)

protease,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_063493690.1\|776634_778137_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_051733921.1\|778206_780039_+	ABC transporter	NA	NA	NA	NA
WP_036939462.1\|780035_781679_+	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_060761374.1\|781675_782338_+	hypothetical protein	NA	NA	NA	NA
WP_057374793.1\|782554_783055_+	single-stranded DNA-binding protein	A0A1J0MC80	Streptomyces_phage	6.0e-12	36.6
WP_013160709.1\|783251_784940_+	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	7.9e-48	28.8
WP_036939459.1\|785111_786107_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_013160711.1\|786106_786736_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_057374794.1\|786748_788269_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_013160713.1\|788255_789626_-	DUF4921 family protein	NA	NA	NA	NA
WP_060761372.1\|789682_791719_+	M3 family metallopeptidase	NA	NA	NA	NA
WP_080774473.1\|791839_794668_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_036939453.1\|794673_795132_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_044636076.1\|795297_797187_+	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	2.2e-43	24.4
WP_013160718.1\|797192_798074_+	thioesterase family protein	NA	NA	NA	NA
WP_013160719.1\|798220_799042_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_013160720.1\|799171_800629_-	NADP-dependent phosphogluconate dehydrogenase	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	2.4e-37	28.4
WP_013160721.1\|800841_803445_-	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	1.0e-46	30.8
WP_013160722.1\|803787_804402_+	DSBA oxidoreductase	NA	NA	NA	NA
WP_013160723.1\|804626_805421_+	hypothetical protein	NA	NA	NA	NA
WP_063493691.1\|805496_807806_+	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	1.8e-103	36.9
WP_048769613.1\|807802_809344_-	hypothetical protein	NA	NA	NA	NA
WP_013160728.1\|809549_809798_+	hypothetical protein	NA	NA	NA	NA
WP_036939798.1\|809909_810224_+	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_013160730.1\|810959_812543_+	trigger factor	NA	NA	NA	NA
WP_100160673.1\|812657_813662_-\|transposase	IS481-like element ISPfr15 family transposase	NA	NA	NA	NA
WP_013160731.1\|813870_815064_+	AI-2E family transporter	NA	NA	NA	NA
WP_013160732.1\|815254_816529_+	AI-2E family transporter	NA	NA	NA	NA
WP_162467436.1\|816639_817251_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	9.8e-41	45.6
WP_162484287.1\|817328_817964_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	1.2e-28	38.7
WP_013160735.1\|818085_819363_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.4e-136	59.2
WP_036939438.1\|819474_819789_-	hypothetical protein	NA	NA	NA	NA
WP_044658236.1\|819907_821350_+	threonine synthase	NA	NA	NA	NA
WP_013160738.1\|821428_822550_+	6-phosphofructokinase	NA	NA	NA	NA
WP_013160739.1\|822634_823384_+	HAD family hydrolase	NA	NA	NA	NA
WP_057374919.1\|823490_826118_-\|tRNA	valine--tRNA ligase	A0A2K9KZB8	Tupanvirus	5.3e-160	36.3
WP_036939431.1\|826207_827002_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_013160742.1\|827265_828060_-	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_112317735.1\|828095_828686_-	DoxX family protein	NA	NA	NA	NA
WP_063493692.1\|828821_830327_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_013160745.1\|830437_830914_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	8.5e-32	52.3
WP_157761844.1\|831036_832251_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_5

2460976 : 2509462

Mycobacterium_phage(27.27%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_048769680.1\|2460976_2462644_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_171035501.1\|2464979_2465303_+	hypothetical protein	NA	NA	NA	NA
WP_041704400.1\|2465368_2466160_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_080516180.1\|2466121_2467075_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_063493853.1\|2467423_2470492_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	7.9e-139	32.7
WP_036942786.1\|2470514_2471903_+	MFS transporter	NA	NA	NA	NA
WP_013160161.1\|2471948_2472944_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.6e-40	33.2
WP_048768940.1\|2473186_2474494_+\|transposase	ISL3-like element ISPfr4 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.3e-195	77.2
WP_155488382.1\|2474973_2476158_-	hypothetical protein	NA	NA	NA	NA
WP_048769768.1\|2477586_2479608_+	AAA family ATPase	NA	NA	NA	NA
WP_048769774.1\|2481609_2482167_+	hypothetical protein	NA	NA	NA	NA
WP_048769776.1\|2482170_2482416_+	EamA family transporter	NA	NA	NA	NA
WP_055344186.1\|2482500_2483145_-	VWA domain-containing protein	A0A2D1AE37	Rhodococcus_phage	3.0e-40	45.1
WP_027588231.1\|2483141_2483531_-	hypothetical protein	NA	NA	NA	NA
WP_027588232.1\|2483674_2484202_+	dihydrofolate reductase family protein	NA	NA	NA	NA
WP_053085385.1\|2484316_2484823_-	hypothetical protein	NA	NA	NA	NA
WP_053085387.1\|2484812_2486210_-	AAA family ATPase	NA	NA	NA	NA
WP_063493854.1\|2486301_2486736_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	8.5e-23	47.6
WP_063493855.1\|2486711_2488031_+	Y-family DNA polymerase	I6RSM4	Salmonella_phage	1.1e-76	42.8
WP_013161963.1\|2488112_2488523_-	hypothetical protein	NA	NA	NA	NA
WP_013161964.1\|2488519_2488744_-	hypothetical protein	NA	NA	NA	NA
WP_081233865.1\|2488968_2490843_+	toprim domain-containing protein	A0A2H4PDF8	Mycobacterium_phage	1.9e-63	69.3
WP_044658394.1\|2491001_2492420_+\|transposase	IS30-like element ISPfr9 family transposase	W5R8L2	Staphylococcus_phage	3.5e-33	36.3
WP_028701541.1\|2492569_2493925_+	FAD-dependent oxidoreductase	A0A2K5B2C5	Erysipelothrix_phage	6.0e-91	42.6
WP_013160028.1\|2495785_2495983_+	hypothetical protein	NA	NA	NA	NA
WP_044657634.1\|2496712_2499127_+	cbb3-type cytochrome c oxidase subunit I	NA	NA	NA	NA
WP_036940428.1\|2500135_2500900_+	slipin family protein	A0A2K9L035	Tupanvirus	5.0e-26	32.6
WP_044636453.1\|2501013_2501436_+	hypothetical protein	NA	NA	NA	NA
WP_081233907.1\|2501709_2502813_-	hypothetical protein	NA	NA	NA	NA
WP_055343568.1\|2502996_2503560_+	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_063493857.1\|2503622_2504717_+	YihY/virulence factor BrkB family protein	NA	NA	NA	NA
WP_060761131.1\|2504763_2505018_+	hypothetical protein	NA	NA	NA	NA
WP_063493858.1\|2504941_2506297_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	7.7e-187	72.0
WP_063493859.1\|2506263_2507052_-	hypothetical protein	NA	NA	NA	NA
WP_013160014.1\|2507335_2507935_-	mismatch-specific DNA-glycosylase	NA	NA	NA	NA
WP_063493860.1\|2507938_2508943_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_036940614.1\|2509081_2509462_+\|holin	phage holin family protein	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LN997841

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection