CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LN890656	Candidatus Promineofilum breve strain Cfx-K chromosome II	10 crisprs	csa3	3	0	3	1
NZ_LN890655	Candidatus Promineofilum breve strain Cfx-K chromosome I	7 crisprs	cas4,csa3,DinG,cas2,cas1,WYL,cas3,cas8a4,cas7,cas5,cas6,cas10,csm3gr7,csx10gr5,csx19,csx15	1	10	1	0
NZ_LN890657	Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence	0 crisprs	NA	0	0	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LN890656_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_1

127459-127602

Orphan

Consensus_repeat	Method
GGATTGACACGGATTCGACGGATTAAAACGGATAGCTCGATCCGTGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_1

>merge|NZ_LN890656|1|127459-127602|CRISPRCasFinder
GGATTGACACGGATTCGACGGATTAAAACGGATAGCTCGATCCGTGTTAATCCGCGTTCATCCGTGTTATCCGTGTTCTATTCATTGATCCACATAGGATTGACACGGATTCGACGGGTTAAAACGGATAGCTCGATCCGTGTT

>NZ_LN890656|1|1|127459-127602|CRISPRCasFinder
GGATTGACACGGATTCGACGGATTAAAACGGATAGCTCGATCCGTGTT	AATCCGCGTTCATCCGTGTTATCCGTGTTCTATTCATTGATCCACATA
GGATTGACACGGATTCGACGGGTTAAAACGGATAGCTCGATCCGTGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045022.1\|121926_127320_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|274708
NZ_LN890656.1\|WP_095045021.1\|118482_121449_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274708
NZ_LN890656.1\|WP_095045014.1\|105020_108503_+\|TGS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223394
NZ_LN890656.1\|WP_095045027.1\|133602_134184_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_LN890656.1\|WP_095045023.1\|127671_128385_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_LN890656.1\|WP_162292526.1\|116407_118480_-\|glycosyltransferase-family-39-protein	unknown	unknown	gnl\|CDD\|274709
NZ_LN890656.1\|WP_095045017.1\|110833_114538_-\|TIGR03663-family-protein	unknown	unknown	gnl\|CDD\|271320
NZ_LN890656.1\|WP_095045031.1\|139991_140588_+\|orotate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|180119
NZ_LN890656.1\|WP_095045013.1\|104122_104338_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045026.1\|132773_133496_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LN890656.1\|WP_157913301.1\|108531_109968_+\|winged-helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|214866
NZ_LN890656.1\|WP_095045030.1\|138860_139781_+\|aminotransferase-class-IV	unknown	unknown	gnl\|CDD\|238799
NZ_LN890656.1\|WP_095045029.1\|137983_138766_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_LN890656.1\|WP_095045024.1\|128512_131659_-\|N-6-DNA-methylase	unknown	unknown	gnl\|CDD\|227226
NZ_LN890656.1\|WP_095045032.1\|140662_143413_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223972
NZ_LN890656.1\|WP_157913302.1\|134339_137840_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224720
NZ_LN890656.1\|WP_095045025.1\|131754_132777_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|366444
NZ_LN890656.1\|WP_095045019.1\|115375_115981_-\|RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|224511
NZ_LN890656.1\|WP_095045016.1\|110029_110455_-\|SufE-family-protein	unknown	unknown	gnl\|CDD\|376883
NZ_LN890656.1\|WP_095045018.1\|114646_115093_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045022.1\|121926_127320_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|274708	TIGR03662, Chlor_Arch_YYY, Chlor_Arch_YYY domain. Members of this highly hydrophobic probable integral membrane family belong to two classes. In one, a single copy of the region covered by this model represents essentially the full length of a strongly hydrophobic protein of about 700 to 900 residues (variable because of long inserts in some). The domain architecture of the other class consists of an additional N-terminal region, two copies of the region represented by this model, and three to four repeats of TPR, or tetratricopeptide repeat. The unusual species range includes several Archaea, several Chloroflexi, and Clostridium phytofermentans. An unusual motif YYYxG is present, and we suggest the name Chlor_Arch_YYY protein. The function is unknown.	8.9968e-133
NZ_LN890656.1\|WP_095045021.1\|118482_121449_-\|hypothetical-protein	gnl\|CDD\|274708	TIGR03662, Chlor_Arch_YYY, Chlor_Arch_YYY domain. Members of this highly hydrophobic probable integral membrane family belong to two classes. In one, a single copy of the region covered by this model represents essentially the full length of a strongly hydrophobic protein of about 700 to 900 residues (variable because of long inserts in some). The domain architecture of the other class consists of an additional N-terminal region, two copies of the region represented by this model, and three to four repeats of TPR, or tetratricopeptide repeat. The unusual species range includes several Archaea, several Chloroflexi, and Clostridium phytofermentans. An unusual motif YYYxG is present, and we suggest the name Chlor_Arch_YYY protein. The function is unknown.	6.53735e-72
NZ_LN890656.1\|WP_095045014.1\|105020_108503_+\|TGS-domain-containing-protein	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	3.06329e-42
NZ_LN890656.1\|WP_095045027.1\|133602_134184_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.6916e-08
NZ_LN890656.1\|WP_095045024.1\|128512_131659_-\|N-6-DNA-methylase	gnl\|CDD\|227226	COG4889, COG4889, Predicted helicase [General function prediction only].	0
NZ_LN890656.1\|WP_162292526.1\|116407_118480_-\|glycosyltransferase-family-39-protein	gnl\|CDD\|274709	TIGR03663, TIGR03663, TIGR03663 family protein. Members of this protein family, uncommon and rather sporadically distributed, are found almost always in the same genomes as members of family TIGR03662, and frequently as a nearby gene. Members show some N-terminal sequence similarity with pfam02366, dolichyl-phosphate-mannose-protein mannosyltransferase. The few invariant residues in this family, found toward the N-terminus, include a dipeptide DE, a tripeptide HGP, and two different Arg residues. Up to three members may be found in a genome. The function is unknown.	8.24632e-09
NZ_LN890656.1\|WP_095045017.1\|110833_114538_-\|TIGR03663-family-protein	gnl\|CDD\|271320	cd05819, NHL, NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.	5.86083e-95
NZ_LN890656.1\|WP_095045031.1\|139991_140588_+\|orotate-phosphoribosyltransferase	gnl\|CDD\|180119	PRK05500, PRK05500, bifunctional orotidine-5'-phosphate decarboxylase/orotate phosphoribosyltransferase.	1.81468e-50
NZ_LN890656.1\|WP_095045026.1\|132773_133496_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.26746e-80
NZ_LN890656.1\|WP_157913301.1\|108531_109968_+\|winged-helix-turn-helix-domain-containing-protein	gnl\|CDD\|214866	smart00862, Trans_reg_C, Transcriptional regulatory protein, C terminal. This domain is almost always found associated with the response regulator receiver domain. It may play a role in DNA binding.	1.05952e-08
NZ_LN890656.1\|WP_095045030.1\|138860_139781_+\|aminotransferase-class-IV	gnl\|CDD\|238799	cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids. It plays a major role in the synthesis of bacterial cell wall components like D-alanine and D-glutamate in addition to other D-amino acids. The enzyme like other members of this superfamily requires PLP as a cofactor. Members of this subgroup are found in all three forms of life.	3.4785e-36
NZ_LN890656.1\|WP_095045029.1\|137983_138766_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.15252e-09
NZ_LN890656.1\|WP_095045023.1\|127671_128385_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.95161e-59
NZ_LN890656.1\|WP_095045032.1\|140662_143413_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223972	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion].	0
NZ_LN890656.1\|WP_157913302.1\|134339_137840_-\|hypothetical-protein	gnl\|CDD\|224720	COG1807, ArnT, 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis, outer membrane].	9.49588e-09
NZ_LN890656.1\|WP_095045025.1\|131754_132777_-\|ABC-transporter-permease	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	3.88267e-17
NZ_LN890656.1\|WP_095045019.1\|115375_115981_-\|RNA-polymerase-sigma-factor	gnl\|CDD\|224511	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription].	1.16483e-34
NZ_LN890656.1\|WP_095045016.1\|110029_110455_-\|SufE-family-protein	gnl\|CDD\|376883	pfam02657, SufE, Fe-S metabolism associated domain. This family consists of the SufE-related proteins. These have been implicated in Fe-S metabolism and export).	2.73134e-34
NZ_LN890656.1\|WP_095045018.1\|114646_115093_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	2.51361e-06

>NZ_LN890656.1|WP_095045022.1|121926_127320_-|glycosyltransferase-family-39-protein
MTAIDNDSPTTEPPPPGPTAPTGRSGLWFALLLLGVLALAGWLRFTGLNWDSGSHLHPDERFLTDLAGTLRSVDDPLDYFRTSISTLNPYNVGRSFYVYGNFPMTVTRYAAEWVAGLCEAATARAGVPPAWCGHRYDSYDGIQLVGRFLSALVDMVSVFLTFLIGRRLYGRWAGLLAALLLGLAVMPIQQAHFFTMDNWATAFTTLALYAAVRAAGLGDAAPRFQWRWFVLFGVALGLAVASRINMAPLALVIGVSAVIWMARERIGAQGRRGAGEQGGEEAQGSEDSGQWSVVSGQPPATRHSPPATRHSYLAVLGIALAALISLLTFRVAQPYAFMDAAMARQTALDETGQEPGTLEVAIKSIIGLNPQFLANMREIQGQQSPEALFPPAIQWTDRPAILFPLSNMILYGTGFVAGVVAWGAVVWALWRSLSGKQGSRGAGEQGSADSGQWSVVSGQPTAHYPLSTPEWMLHAIPLFWTLTYFLYMGTRWVKSVRYFLPLYPALFVLAGWAVVFLWRKAVIAQGRGGAGEQGSRGAGVQGSDTRATRHAPPATRYPLLVALLVALIIAPSLLWALMFTNIYRQPMTRIAASEWIFDNVPSGATLLYDTPDGTTAEMNLPLKGMLFEENGVPLFLDFTLPNDGVIRAVRFNYLSDPDFDGDGAIEDSETIRVRLNDGAATETVLALDGERRTVVVELPPLPLPGGQPARLTVEGGPGGPIRAGTSLLVNEHWDDLLPVSTGGRNAYGAYYTEVTGGQRPVTHPDSAEKREEVIAWLDEADYIMLSSQRAMWNLPRMALTYPLMIRYYEALFSGELGFELVAQFHGDTRLGPLQFSDTTAQLAWGDAPAIGWPPPGELAAEEAFSVYDHPPVWILRKTANYDPARTRALLESVDLSNVVVQNPLEATKARGGLLLSDYEAALQRAGGTFHEVFAVDGLLSTRPWLAAVVWMIALVLLGWAAFPLAFVALRGLPDRGYALARVLALLIIAYLPWLAASIKFMPFSRGTIALALVLLVAVSAAIFLRRRAEMVAFLRERASYILLIELVGVGLFLFMAFIRLGNPDVWDVIWGGEKPMDLSYFTAVMRSTVFPPYDPWFAGGTINYYYFGFVFVGALTKLLGIVPAVAYNLALPMLFSMTGLGVFSIAWNLVTAAPDLRGAGDAASGDAASPSPLRSTIRSRAAIAGFIAVALALLLGNLAQVSVIGQAWYQTGSASLEELPLIGGAARTLDGGLKMLGGQPSTLYPGDWFWIASRAINANEGEVQPITEFPYFTFLYGDLHAHMISMPLQLLALGWVVAVVLGSRGEQGGRGAGGQGREDSGQWAVVSGQPPVVRGPSSVVSGPPPATRYSLLATFLIGALVIGALRPTNTWDWPTYLLLGGLALAYAVIRREGLTWRAAGRAVILTVALFGVSSLLFLPFAANYGAAYSSVSLWPGSYTNPLNYFLVYGLFLFFVIPHLAREWRDWAAAWTEAGKRRLEPFGWLIVLGLAALVGLMALLLVRGQWVGPIALPLIVAAGLPALRPGLPAARRVVLALMSAALGLSLLVEVIVLDGDVGRMNTVFKFYLQAWLMLSVACGPAAVWAWPAVRRSRLRPAYTVVLGVLVFAALLYPLLATPAKWRVRMNRDAPHTLDGAAFLDYVEYGDTDYAGNSITIRPGDDRAAIDWLQRNVSGTPVILEAFGDNPYRSTAARVAMYTGLPTVIGWDWHQRQQRAVTPGTMVGNRIDDVNNFYNTLDVAQARAILAKYDVEYIFVGTLENAYYWPEGLAKLEGLVADGTLVEVFRDDAARILRVTGGG
>NZ_LN890656.1|WP_095045021.1|118482_121449_-|hypothetical-protein
MTDILSAIRWWAALTALGLAALPLVYTLLRRLPDRGFAFARPAGLLLVTYVFWLAGTLGFSANDGGGIALALLVVGGLSWLAYRRRPDSDPPLGEWLRANLTSVVVTELVFVGIFALWAWVRAQNPAISATEKPMEFAFLTGVGQSPTFPPLDPWLSGFAISYYYFGYVMVSLLSRLAFVAEPVAFNLAIAWIVAATATGAFGMVYNLIALRRPVTTDRGPQTADHSLIAPGSGRPSAVGGHGRAAIVLGLVAALAVPIAGNLQIGLELLHGNGIGSDAFWAWLDVRDVDGPAVNSPAIAPSAGSDATAAQPARYETSSWWWWRASRVIHEYHLSGRAEEGLEPIVENPAFSFILGDLHPHVLALPFAFLAMAVALAWWREITNYELGIRNSEPATRHAPPATTPSSFIIHPSSFIISLAVPWPLWLFTAVVLGGLSFLNTWDVGIYLFLVLGAWFLGHWFRAGTTRGLWRRTALLAVALVVPAALLYLPFYLGFRSQAGAPFILPFLMRPTRLAHYLIIFGMPMLVIVITLVTMAARRRFRHWQAGLGAAAALVGGLLLVMLLWTWLLAAGPESGRIVDLARELAITLPAHPGTTFAPGWGVRAVVALLPAVLGARLVSPWLVLLLAGVIALVVMLFRSWVEEEEKPQITQITQIEEEEIYPLIGQIGQIKEEGDPQISQITQIEEEENYPRIGQIEEKRGGAFDVAALGQVRVAADAEWGARAMPFVLLLILTGALLTLGPEFVYLRDNFGQRLNTTFKFYYQAWAMFGVAALVGLDYLWATRRGAADRVVAGLATAGYLALLAVALLFPFFAVQSRAAEYRGPARTADGAAADRQPATLDGLAQLARYNPAEYEAILWLRDNVAAAAGAPPVILEAVGGQYTGFGRVSAATGLPTVLGWAGHEWQWRGSDHPEPGRRETIVEQIYTTRDLGVVAFLLDEFGVHYIVVGDPEREQYGTVGLSKFDELPVAFANDRVTIYRWQPAAP
>NZ_LN890656.1|WP_162292526.1|116407_118480_-|glycosyltransferase-family-39-protein
MIYEPIPPEPDAADSLPPALPPPPGGVRVYAIPSHLALAPVPAAPSRWAAVTVADGLMVVIGVLAAVLRLGELARLPLSAAEAAAALTNWQAATGAALTAPPASPAYFAFTHLLFSLGGASDAGARLVPALFGLLTVLLPWLLLRGRARPALWLVAGLLLAVSPLLVAVSRTAGGDAIALFALLLLALAGSALVPLPLGEVRRGFLGAEEKDPLPNPLPGGEGTVPLPNPLPGGSALVPLPLGEVRRGFLGAEEKDPLPNPLPRGEGTVPLPVGEVRRGFLGPSAVLAGIALGLGLTSSPLFYTGLVALLPALYWLRGGRLAAAGWRPFVIAAAVTFVAVASGLLLRPEGLGGALRLLPAWLGGFGLPTGGDWASPFLALLRYEPALLILAAPAAVWAWLAGDRAGRALSLWLGATLLLMALQPGMMINGAAAVLPGALLAGHLAADLLGQRAALGGSGRRVAWGTAGALVGLGALALAVVGRFARLNLLSGEDGPLIGLAALAFVLATLAVVLALAWDNTAARRGALAGALALLLFWQWGAAWQLSRLGANDPRERWVTSGTDADARRMTDLLGRVSRQMANSDHDLAVFSLVDSPVVAWYLRDLVGFQSGPTLPANATPDVVIGPAAAEPPLYADYYGADFDLTQTEGVAGGATLNDTLRWLLFRESNAAVDVERVIVWIRSDLGNNN
>NZ_LN890656.1|WP_095045019.1|115375_115981_-|RNA-polymerase-sigma-factor
MNEQPLLTWLDTPATHGDAPDGDAALIGRCLAGEQAAYGELYDLYGGVIYRLAYSLLGDREDAEEVLQDSFEYAFRRLDHFDARKSAFKTWLYRIAVSRCRNKRRRKWLPSLSLSAFDDREPRDPAAAPPDETAALNEQQRAVWAAVGRLSPKLREVAVLRYYGGLQYGEIGAALDIPAKTAESRMRLAHQALREWLSEVV
>NZ_LN890656.1|WP_095045018.1|114646_115093_-|zf-HC2-domain-containing-protein
MDTEHTLSLITDYALGLLAAEERRRVEAHARLCPACRAALQREQRVGALLRDAARAVTPPPGRLAALRPARPAPRPRFAPLSARLAPLTLAVGMVVMGLLVASGRLPNAPTVFATAETPTLTATHTHTPTATLAAVVTTPAPQTTPKP
>NZ_LN890656.1|WP_095045017.1|110833_114538_-|TIGR03663-family-protein
MTELTTPPAPESKTPDWLSRPLVAALSIDWEKAIYLAFMLIAIVTRFYGLGDRVVSHDESLHTQYSYQFYHGDGYVHSPLMHGPTLFHATALSYWLFGDSDFASRVPNAILGVILVLIPYFLRPWLGRRGALFASFMFLISPYITYYSRYIRHDIYLIVFAFIVFIATWRYIRERHNKYLWWFTIGLVLMFATMEASFIYVAIFGSFLVVRLLALLPGAPWLRELWPRLRMPLLIAVAGVVLVGVGVGAHRLLPDSAADAATATATSEGFAADPNATTTTSAAPASSTDALTRWVEIAGIVVFGLGLFLVVRAMRPHIDGYPEFDLIILYVTLVLPLASPLLVRVAGYNPVDYSINTCVLDGQETMNAVAVFTARLGNPTCISAFLSSAAMKPVAFLLAALLVSVLVGLWWDRRRWPPLALAYTVVFLFFFTAIFTNLNGWRTGAIGSLGYWLEQHGVQRGSQPPFYYLFVTPLYEFLPLIFALAGMVLWTQQRRINGVVWYWALFGLLAALAYSLANWYFNRDLAEEASRLPGLLAAGIILAGAAAYWFAVRRGQIVRRLELERGLRDLVDLPAFVGFVPALIWWTLLVWPAYSIAGEKMPWLSVHITTPMILLAGWYMGQRVESVASRELLSRRALVAVGLSALLIIVSAIALGPLLLGQIRLGSQEVELLKNVGRFLGGLLLAAGVAYLWWRVTRPLERHVRGVARTLAVFAVLAGLTIRFTFMSSFVNYDYTNEFMVYAHGAPATKSVVLAQLEELSMRLYGDKSIKVAYDSDVSWPMTWYLREYPNRVFFGDNPSQTLNDAPVVIVGNKNWTAADPYLANNYTANEYTFLWWPVEDYRRISWDAVFGLGQAPDQPRRGLLSADVRQALWDIFFHRDYQKYGEVFGGTYTAGEWPLRHDLRLYVRNDVVGNLWDYGVGGTSVALVDPYEAGQLAPSANVILNAAGIAGPGAGALSSPRNVAAGPDGLIYVADAGNHRIQVFDRDGTFVRGWGGFGAAPGQFNEPWGLAVGEEFVYVADTWNHRIQKFSLDGQLLGTFGASGSPAADDPTGGLGLFFGPRDVLLLADGRLLVTDTGNHRLQLLDADGTFLSVIGGFGNELGQFNEPVGLAAAPDGTVYVADTWNGRIQRFSPELFAVGEWPVEAWDSQSINNKPYLATDSEGRVYVSDPEGYRVLIFSPTGAYLNRFGQFGSDPAGLGLPNGLAVAADDTLWVADAGNHRVIGYPALFGGE
>NZ_LN890656.1|WP_095045016.1|110029_110455_-|SufE-family-protein
MTQLPERLQEIIDDFAALEGQEKLEYLMELSEQLPPLPEWLAARRDEMDMVHECMTTVFVHATRDDDGRLTFYLDVPPESPTVRGYASILQQGLEGVTLPELLAVPTEFYLGLGLQQVLSGQRLTGIGAILAHIKRVGAGA
>NZ_LN890656.1|WP_157913301.1|108531_109968_+|winged-helix-turn-helix-domain-containing-protein
MYGNPFSTFLSSGVFLPTGREEILAEMAQVITLPQPDDREIHGLPGMGKSSLLRYVNSPDFIRDQTPNFMGKFAGQSYRLFIVYVAGWIESIHPYVLLYREFFRAYQSYYDRMLAEHPAIVLPSPPVGEIDDLDGPNAFSRLEPYLRRLTLAGIRPVILFDEFDDDLAYKRLDADETARLSSWKGYCSLIFATDRRLEDVNTDAKGSPLYKRLTQIAFRELLPDEAREFLAQILAREERTLPDEDIDCLVELAGGFPYLLILAGRALWDLRRRVGLNPQADETATPLPDTVKPYLHERLSGEFQREFDQYLKDRPADHLRVLFELSREGTLSFDPATMTRQSFRLMGLEEYGLVDIDAEGRMRLFSPLFREFLIARAQQPAAPAAVMAAAENEPKNLTELQANLYSVFRNKPDEVLTFEELGRKVWGWAADRQSEATGDEVRKIRIAVSKLRRQLEESATGERITNMRGWGYRFESAR
>NZ_LN890656.1|WP_095045014.1|105020_108503_+|TGS-domain-containing-protein
MTTTSGSANRSLAGMAATDADVKTHLAGESLPAGWPDHISHLATEWRLPAESVAAACLVAGVPCAGLVGRPPPNVVELAVKLLEWQRYYLPAGLPTATPQDAPPAAERRLREFYRAICCDAPDMRHVLMLLAAHHLRLFGPDAGPALAAETLGVYAPMAGMLGMYHVRRCWIEESVRLTRGDEYRQQAAAMGIVLDEPTSEALESAVDRQQAAWPPAASGSPLPPNRDLLDLEQRAILFSRLRHDLDTALRHEFGPDNKPEVQLIFDLPGHALQRREQAIGTMDNPQLIVRVVCHSRVDCYRAMDVIHNVGRLAGTGQTQVIRDYIAAPHPNGYRALQTYTIWPQPSEFTSDGRLIKFHILTAEMQHLNEWGILAGMDQDPAPRRRIAAWWNHLDEKSRSLSSRTKDKYGDIAAYLHHFPPGSAADPLYCFTPLGEIVLLKPGRTALDFAYRIHSQLGPQTAKVFINGESVPLGTPLQNGDMVNVIYDPLVAHIDFSWQDLVGSKRSCRKIRAALQRRAGFTHPGRGEFERALIRRLDLYKRRSPDQPYSPPACTSSEIDRFLERAALGYGAAGREALYADLAGRPQLADELANRLITESNVRNLRLPNGEPLPTHLKRIEQCPSCRPTVKDAIHGRLFGAAGEMLIIHIPSCRRGSPNAPIMELQWDTEDLAESWPLYHFEINTRDFDGLLNKMLQLVYGIPHAYLYSIEARVNELYRAIIKLDVAIKLPQLCQDLQAQIVALADDTQVSYRALLGNRRGEVSAVDMSRQINNPFTTSEVTDWRFMGRDEVINSILSWINGYPVRSQVLLLHGQRRVGKSSLVSRLCEQGKLKEGERPVVPVRVDFRNAKLDQPHTVAELLIQNIFYNAIGQPPPRLELHEDPLIWLDRHLHEAERLLAGKRLLLLIDEFDAGYESFVAAKRRPRLLGQLRAMMDAHAGIRWLLVVQDVYLADPLLQAALPHLPLEVPRVHVGHLPPEAARQLIIDLTVRNEYRFAPAAPGEDGIPEQIVQWTAGNPYFIHIIGHRLLSRVAREKTRLIRPHDLTLTIQLILGRPIFFSHFIEPFEASPARRRIVYHLAHTLKLGERRPLDEMTPTLAALCDIPAGAVAAHLDYMAQVGVLDVARDHRQGDMVGIPVRIWHEWLANYWAAEPDNPAGGG
>NZ_LN890656.1|WP_095045013.1|104122_104338_-|hypothetical-protein
MMDQTMLVLSGLVVGLLIALVVLIVIINRPPTMVYVPPPTPPPAQDSGCAGILVSGVMVFIGLVFWVFILI
>NZ_LN890656.1|WP_095045023.1|127671_128385_-|Crp/Fnr-family-transcriptional-regulator
MPTTRDSNAVQALQVVPFFANLPEDHVAALAKALVPRRFSPGQVIFHLGDPGGLLYLISRGKIKISHTTSDGQEVVLAILGPGDFFGEMALIDDAPRSATAITLEPSETWTLHREEFIQYLTDNPEFALHVLKTLARHIRRLNTQLADIFFLDLPGRLARTLLNLADQYGRRAADGTIIDLSLTQTDLAEMTGATRVSINKALGRFRRAGWIQVTGRQVTVLDRAALEALLVVPGEL
>NZ_LN890656.1|WP_095045024.1|128512_131659_-|N-6-DNA-methylase
MPDLNLKPSHKIVTNFYKAVAESGQLSLLHEGAVAPHFAALLRACAAPHGWTLQEQYQLARKGQSQLRLDGVLVDTFGLRHGVWEAKDTDDDLPKEARAKFKKGYPTDNILFQSPTRAILYQDGKEAADEDLTDPERLVSILKEFFAYEPPHYEQWDRAVAEFSVKVPELALNLKSLIEKELKENKRFAAAFDDFAEVARQAVNPNISVAAVEEMLIQHLLTERIFRKVFNNPDFAQRNVIAHEIEKVITALTSRSFSREAFLGRLDRFYGAIETTAATIDNYREKQTFLNTVYEQFFQGFSVKVADTHGIVYTPQAVVDFMVRSVDDILRREFGRADGLAADGVAILDPFVGTGNFILRVMRQMPRTRLEQKYRAELFCNEVMLLPYYIASMNIEHEYVELTGQYEPFEGIALVDTFELAEKDNPQQQFRLFVPENTERVERQRQAPIFVIIGNPPYNSGQVNANDNNKNRVYKMLGRAVSDTYAYDSHATDKSDLSDPYVKAFRWASDRIGEEGVIAYVSNSSFLEAIAFDGMRKHLLQDFDSIYVMDLGGNVRKNPKISGTTHNVFGIQVGVCITILIRRKEHQGGGKLFYARTEEFWRRGEKYEFLDVKGNYRNIEWSELFPDENYNWLTEGMDESFGSFIPIGTMASKTNELAESESVFWLYSLGANTNRDAWAYNFDSSALSQNILHFIETFNWDVEKWHNRLNRNAKPDDFITNDETKIKWSSRLTEALLRHEKAEFAEDKVRFALYRPFCKQSLFFDKVLTHRRGRIPLIFPHQKSENLVICLRTLGNTKPFHCLVTDSIPDLHLTGDSQCFPFYTYNEDGSNRRENITDWALARFQEVYSGQWSVVSGQTDHYPPATDHSAIDKWAIFHYVYALLHHPAYRQTYAANLRRELPRIPFVRDFWAYVRAGARLAALHVNYEQQPEYPLTRIENPDQPLDWRVEKMRLSKDRTQIVYNDFLTLGGIPAAAFDYRLGNRSALEWVIDQYRVTTDKRSGITNDPNRADDPQYVVRLIGQVVAVSVETVGIVNGLPAWEIMTNSG
>NZ_LN890656.1|WP_095045025.1|131754_132777_-|ABC-transporter-permease
MIVLIKRILRGIRNDKRLLGLVFVAPLLILSLIYVLLSSSAQTPVIAIDTGHPVLQRLAAAIDDSTAVVADYDAATANDALADGTIDAAITFDDNRLVVTLLEPDAGVAAGVSAALQDAQAALSGAAVRPEFVFLYGDPEATLFDSFGYILLAYISFFFVFLLAGIAFIRERTQGTLERFILSPIRRGAIVAGYTIAYGILATIQSVVVVLFAVTVLGLNVGDNVLPAILIMVLMSLAAVSIGLLVSVVAANEFQMVQLIPVVVIPQALFIGLIPLDNIPFGLGKLAYVMPLYYAANALKQVVVYDAGLAAVAPELAVLLGLTLALGVINTRILRQFRII
>NZ_LN890656.1|WP_095045026.1|132773_133496_-|ABC-transporter-ATP-binding-protein
MIEVNAVSKSFGRQKVLDNISLTIPRGQIFGLLGPSGAGKTTLIRLITGAEECDAGTVLVGGQRSPSFAALRQMGFMPQNDGLYTDISGGDNLAFFGGLFGLRGDGLRAAVAAKLALVGLTADAGKLVQHYSGGMKKRLSLAVALLHDPALLMLDEPTVGIDPVLRRAIWDEFARQRAAGVTLVVTTHVMDEIANCDQAALIHDGRLIAHGTIAELTALGRGNIENLFLAQTNNKAGMTS
>NZ_LN890656.1|WP_095045027.1|133602_134184_+|TetR/AcrR-family-transcriptional-regulator
MSIQSPDSKYRQTERAIEQAYLALCLEQGRLDVTVSEVVSRAGIGRSTFYLHFNDVDGLAAAIQERLLATAEAHLALAFPDVLAHGPEALPRYFDPVAQLLAQNRRALLVFMGRNGSPAFIYRVKQRGKVYLRRLFAGRADERTEYVIEYMVSAGMGLIIYWLEDDMALPYETLLALLGTILFRGPLAAGFAQ
>NZ_LN890656.1|WP_157913302.1|134339_137840_-|hypothetical-protein
MKDARRLLLLELIALTAILLVAAALRLYRLLDVPPGFHFDEAIDLKIALDVLHGARLIYTPEGWGREALYYYPAALMLRLVAYNPLALRATAALFGLALIGVSYALARRLHGRMAALLTAAWLAVAMWPVWAARFGVRHISLALLLGLAAWAFWWAFRAAGGGWRVASHASELATRHPPPATILPFLIAGILLGLTAYTYQPARFVPLLFGGFGVYLALCHRRSAWANRRGWLVWGVSAAAVALPLVLVLSRATPVEVGERAFSIEPLTELLAGNPRPVLDNLVATAKVFTVAGDPLKSYNLPGRPLFVPRWTGLFFYAGLALAVWRWRRPAYAFVLLWLVVALLPTVVTISAPNFNRMVAAQFPIFFLAAVAAAETSAWLATRRLPARGVAALSLVAALVVLAALALTAQATIRDLFHVWPEQFADVHPLNREIAAVADFLEHAADGRPVVISSRDIEDEDPYIVSVSLDRAIDRRWVDTSQALALPAGADEAWLIVTADRWIDPVLMAWVGEEAQGSGGAGEQGRGNVGEMMRCRGEAAAMGVVETMGLVSPPPRPLAAMGVVETTNLVSPPPRPLAAMGVVETTNLVSPPPRPLAAIDVVETMGLVSPPPRPLVAMGVVETMGLVSPPPRPLAAIDVVETMGLVSPPPRPLAAMGVVETMGLVSPPPRPLVVVDVAGNNGPCLAAASPSLGMVEEGSGNRERSMPVSQRRLSRLPDPYATLDYFVNPTASYGGMNPAADTQNRLKPVAGAALELIDGETTGSAVVSNTNRITASYGGMNPAADTQNRLKPVARAAHERIGWAAPGGATLFNPIHRVLFASRGFQPAAMGATNMAAPTAATAAPIPNPIANTAPRGATLFNPIYRVLFASRGFEPAAMGATNMAAPTAAPIPNPIANTAPRGATLFNPIYRVLFASRGFQPAWLQPAWLQPAWLQPAWLQPAWPQPTVSQPAWLQPATPAATNATAATNPTGQTVTANPTTNQSHPTSQTDYAKGLFSLYHLSTANWPTLPTPALTLPPESSTTASPIYPIPFCACEPGAAVAPALWLTGIEPGPAVPGAELTVLTSWRTGPARFLSLAMFVHLLDANGAIVAQDDGLGYPPHTWQPGDRFLQLARLPLPPDLPPGAYTLQFGLYDRASGARWPLLGPDGQPAADRLLLMTNDE
>NZ_LN890656.1|WP_095045029.1|137983_138766_+|hypothetical-protein
MNKRPIIGAATAAFLLSLLLLIGCGGAAEEEPAVTLPAAAGVAAQPTKPPPVVAANTAPAATAPATAASATDAPADAPADDAPQLPTAIPTVAPTDIPPTAIPTATATAAPTAVPPTARPVVQPTAVPPTAVPPTAAPQIGANGLVASHFAIQERAQLTVNGDVWFEFNIANSTSGDVAFDALGVMPKKDGVDRKEWYQHSYGGNNDIIPRSGLTWDDHINLPEAGNYTLRMVVCFDGPACLAQTGTWHTLSPEIAVTIK
>NZ_LN890656.1|WP_095045030.1|138860_139781_+|aminotransferase-class-IV
MTTFQLFAVEDAGPRPLPVPADAIQFADLYRGLPLGVYDAFRTFEHNKFLYLGRHLARTERSMALLGWQYALNRPRLLQALHGLVSAAPWPELRVRIDILAEPAAFAPGGLARELIALQPFTPPPADLYERGVAVDFAADLRRDTPLAKTAEFAARRPLGGGLRMMEQTADDRPPTTDSIMPPAVVPYEYLLLDEHRRILEGSGTNFWAARDGVVYTAGEGVLEGITREILLRLIPELGIEVRLEAVGADEIATLDEAALSGSSRALLPVVSVAGQPVGDGRPGPIMRRILDAYNLFVAENVRAAI
>NZ_LN890656.1|WP_095045031.1|139991_140588_+|orotate-phosphoribosyltransferase
MPTAIVDLILTLHDIGAVQFGRFRLHSGRESRIYIDLRVLVSYPAALRQATAAYRTVLDDLPFDLLAATPLAGLPIGTALCLDMDRPLIYPRKTAKSYGTGKNIEGRWSIGQTAVVIDDLITSGDSLLETIATIKAAGLKVHDAVVLIDREQGGRELLAEQGYRLQAVTTLRGMLDTLVEQARLSPRQRDEVLASLTG
>NZ_LN890656.1|WP_095045032.1|140662_143413_+|GNAT-family-N-acetyltransferase
MSDNITRSTAHNVLRMEKNPLEVMFKPRSVAVVGATERPGSVARTILWNLISTSFGGTIFPVNPKYNSILGIKAYPSIGDIPDPVDLAVIVTPAPSVPAIIEECVAAGCHAAIIISAGFKETGPAGAALEQEILKIARRGNMRIIGPNCLGVMNPITGLNATFASTMARPGSVGFISQSGALLTAILDWSFAENVGFSAFVSIGSMLDVGWGDLIYYLGDDPNTKAIVMYMESIGDARSFLSAAREVALTKPIIVIKPGRTEEAAKAAASHTGSLTGGDEVLAAAFRRSGVLRVDSISDLFNMAEVLSKQPRPRGPRLSIVTNAGGPGVLATDALITNGGQLAPISDEAMAAYNKLLPAPWSHNNPIDILGDADAGRYAESIKIAINDHDSDGTLVILTPQAMTNPTETARALVDQFARPAGHVYGKPILASWMGGPEVSSGKDMLNKANIPTFDYPDTAARIFNYMWRYQRRLTALYQTPEMAQDFGETGFKHYLIKEMLEQIRATGRTILTEYESKQVLEAYDIPTTPTRLAGSADEAAAIAAEIGFPVVVKLNSETITHKTDVGGVRLDLTNADEVRNAFLTMEKAVAEKYSPRDFLGVTVQPMLRLHDGYELILGSSPDPQFGPVVLFGTGGTLVEVFKDRALAIPPLNTTLARLTMTRTKIYEALKGVRGRPPVDLAELDKIFVRFSQLVIEQRWIKEIDINPLFASHEQLIALDGRVVLYEPEVTEDQLPRLAIRPYPTNYVKQFNNKGGEAFVLRPIRPEDEPKMVQFHEKLSEQSVYLRYFRAFKLDQRVEHERLTRICYVDYDRTIALVVEHTDPATAETAIVAVARLTRLPNPEEAEFAMLVRDDFQGRGVGTQLLQNLLDFGRDEGIKRVVAFMLPENRGMIEISEKLGFAMGREDEMVKAVKEL

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Crispr_ID: NZ_LN890656_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_2

286565-286677

Orphan

Consensus_repeat	Method
ATTCTTAACGTAACCAAATTGGCTACGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_2

>merge|NZ_LN890656|2|286565-286677|CRISPRCasFinder
ATTCTTAACGTAACCAAATTGGCTACGGACTTCCACGGACAAGACGGATAAAAAATCCGTTGTCTCCGTCTTTATCCGTAGCCAATTCTTAACATAACCAAATTGGCTACGGA

>NZ_LN890656|2|2|286565-286677|CRISPRCasFinder
ATTCTTAACGTAACCAAATTGGCTACGGA	CTTCCACGGACAAGACGGATAAAAAATCCGTTGTCTCCGTCTTTATCCGTAGCCA
ATTCTTAACATAACCAAATTGGCTACGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045139.1\|284970_285693_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045140.1\|285863_286475_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_157913321.1\|290009_290285_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045146.1\|295916_296807_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_LN890656.1\|WP_095045135.1\|279453_280080_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045143.1\|292317_293274_+\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_LN890656.1\|WP_095042686.1\|290319_291657_-\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_LN890656.1\|WP_157913322.1\|291794_292220_+\|pilus-assembly-protein-CpaE	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045148.1\|297143_297560_-\|CoA-binding-protein	unknown	unknown	gnl\|CDD\|224745
NZ_LN890656.1\|WP_095045132.1\|276242_276509_-\|type-II-toxin-antitoxin-system-YafQ-family-toxin	unknown	unknown	gnl\|CDD\|379750
NZ_LN890656.1\|WP_095045134.1\|276998_279143_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045138.1\|284225_284729_-\|IS200/IS605-family-transposase	unknown	unknown	gnl\|CDD\|376616
NZ_LN890656.1\|WP_095045144.1\|293353_294703_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_LN890656.1\|WP_095045133.1\|276508_276769_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	unknown	unknown	gnl\|CDD\|274102
NZ_LN890656.1\|WP_095045130.1\|274115_274787_+\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_LN890656.1\|WP_095045137.1\|281071_283771_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|132354
NZ_LN890656.1\|WP_157913320.1\|286738_289882_-\|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl\|CDD\|223660
NZ_LN890656.1\|WP_095045145.1\|295041_295902_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|372253
NZ_LN890656.1\|WP_095045147.1\|296796_297084_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_LN890656.1\|WP_095045131.1\|274896_276240_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|365848

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045130.1\|274115_274787_+\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	1.09494e-33
NZ_LN890656.1\|WP_095045146.1\|295916_296807_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.47609e-84
NZ_LN890656.1\|WP_095045143.1\|292317_293274_+\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	7.68661e-86
NZ_LN890656.1\|WP_095042686.1\|290319_291657_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	2.41663e-29
NZ_LN890656.1\|WP_095045148.1\|297143_297560_-\|CoA-binding-protein	gnl\|CDD\|224745	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only].	1.32262e-46
NZ_LN890656.1\|WP_095045132.1\|276242_276509_-\|type-II-toxin-antitoxin-system-YafQ-family-toxin	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	5.04316e-46
NZ_LN890656.1\|WP_095045131.1\|274896_276240_-\|cytochrome-P450	gnl\|CDD\|365848	pfam00067, p450, Cytochrome P450. Cytochrome P450s are haem-thiolate proteins involved in the oxidative degradation of various compounds. They are particularly well known for their role in the degradation of environmental toxins and mutagens. They can be divided into 4 classes, according to the method by which electrons from NAD(P)H are delivered to the catalytic site. Sequence conservation is relatively low within the family - there are only 3 absolutely conserved residues - but their general topography and structural fold are highly conserved. The conserved core is composed of a coil termed the 'meander', a four-helix bundle, helices J and K, and two sets of beta-sheets. These constitute the haem-binding loop (with an absolutely conserved cysteine that serves as the 5th ligand for the haem iron), the proton-transfer groove and the absolutely conserved EXXR motif in helix K. While prokaryotic P450s are soluble proteins, most eukaryotic P450s are associated with microsomal membranes. their general enzymatic function is to catalyze regiospecific and stereospecific oxidation of non-activated hydrocarbons at physiological temperatures.	8.21919e-98
NZ_LN890656.1\|WP_095045138.1\|284225_284729_-\|IS200/IS605-family-transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.40088e-34
NZ_LN890656.1\|WP_095045144.1\|293353_294703_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	1.74977e-126
NZ_LN890656.1\|WP_095045133.1\|276508_276769_-\|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin	gnl\|CDD\|274102	TIGR02384, Putative_antitoxin_RelB, addiction module antitoxin, RelB/DinJ family. Plasmids may be maintained stably in bacterial populations through the action of addiction modules, in which a toxin and antidote are encoded in a cassette on the plasmid. In any daughter cell that lacks the plasmid, the toxin persists and is lethal after the antidote protein is depleted. Toxin/antitoxin pairs are also found on main chromosomes, and likely represent selfish DNA. Sequences in the seed for this alignment all were found adjacent to toxin genes. The resulting model appears to describe a narrower set of proteins than pfam04221, although many in the scope of this model are not obviously paired with toxin proteins. Several toxin/antitoxin pairs may occur in a single species. [Cellular processes, Toxin production and resistance, Mobile and extrachromosomal element functions, Other].	4.20776e-17
NZ_LN890656.1\|WP_095045137.1\|281071_283771_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|132354	TIGR03311, Se_dep_XDH, selenium-dependent xanthine dehydrogenase. Members of this protein resemble conventional xanthine dehydrogenase enzymes, which depend on molybdenum cofactor - molybdopterin bound to molybdate with two sulfur atoms as ligands. But all members of this family occur in species that contain markers for the biosynthesis of enzymes with a selenium-containing form of molybdenum cofactor. The member of this family from Enterococcus faecalis has been shown to act as a xanthine dehydrogenenase, and its activity if dependent on SelD (selenophosphate synthase), selenium, and molybdenum. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_LN890656.1\|WP_157913320.1\|286738_289882_-\|DNA-polymerase-III-subunit-alpha	gnl\|CDD\|223660	COG0587, DnaE, DNA polymerase III, alpha subunit [DNA replication, recombination, and repair].	0
NZ_LN890656.1\|WP_095045145.1\|295041_295902_-\|ABC-transporter-permease-subunit	gnl\|CDD\|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	4.32346e-12
NZ_LN890656.1\|WP_095045147.1\|296796_297084_-\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	1.9665e-10

>NZ_LN890656.1|WP_095045140.1|285863_286475_-|hypothetical-protein
MNRWRVVVWGVVGLLVIGLAACGGAGGDEPGATDGTTAAGTAAENDNETLEEAAQETTGEDPDQGEEATEGDETTEGEAEGSKDETLEELGGGFVYRREGGIAGFCDVVTVLAGTATIGSCATEPPSILGEVTLTADQSQQVLTWLEELRTFEHENADAATADAMSISIVFNGEGDNEPTDEVIAAIEKLAQELLAGGAATEK
>NZ_LN890656.1|WP_095045139.1|284970_285693_-|hypothetical-protein
MRDRFFLIAGILGLGTIAMTLVLALIGPRQIGPLPPGFITPVMAFEFAETPAEVQTLFRPEGSAAAMDRVNRWDFLYMALYNAFLGVFALAAARHSGRRFFYIPAALALVILAADALENVQLLGITRLLGDGEIAPILGQLSPLLGRLRFYTWLKWGGLALYGLLIAVYFRGLPGRWRWVAPVVVLPAVLAVLALVARGLPHELMALGVGVMLVLLTVFAWRAAGGDPPHVVAYSNPPQK
>NZ_LN890656.1|WP_095045138.1|284225_284729_-|IS200/IS605-family-transposase
MPFWRSFAHLVWTTKNRRPLIRPQIEGALYACLVSRAAEMGCYVHAVNGMADHVHVVISIPPKLSVSDVVKNMKGSSSHFVNHELTPRPEPFAWQRGYGYLSLGESQCAQAVAYVENQKQHHQLNSTNSWLERVDEDEEQDEATSPSPFRQIREERAVYQAFDELPF
>NZ_LN890656.1|WP_095045137.1|281071_283771_-|molybdopterin-dependent-oxidoreductase
MDFQLNGETRHYDGDPELPLLSYLRLNEGITSPKDGCAPQAACGCCAVDVNGKSTLACVTPMKKVAGGRVTTIEGLGDYRQSVFANAFVAKGGVQCGFCIPGMVISANCLINKNAEPTRDDIAQALTHHLCRCTGYKKIIDAIEVAAAAIRKEEEVLPPAADGRVGGRHPKYRAEDLVLGRHDYVADITLPGMVHGALRLSDHPRARVLSIDTSAAEAVPGVSRVLTAADVPGRRFVGLIRQDWPLYVAAGEETRYVGDALAGVVAETEAIARAAAELIRVEYEVLTPVTDPHAALLPDAPPIHPAGNLLSRTAFVRGDMAAAVAATAHTAHGIFQTQRIEHGYMEPECAIGIPTAVRSDDFSRPSIDEQDFRQVYAEGETREDATKVATTNEVIHVLSQSQGVYDDRIQIAALLGLPLEAVRVTLVPNGGGFGGKEDLSVQGHAALMAHLTGRPVKVTLTRAESIIIHPKRHPIWMDYTVGCDAAGKLTYVKVKFVGDTGAYASVGMKVLERAAGHATGAYHVPAADVEALAAYTNNIPCGAMRGFGVNQAVFGLESCLDELCQQAGFDRWQFRYDNALQNGDVTSTGQIIEGGAGVRETLLAVKDAFYAAKYAGIACGIKNTGIGNGMPDASQVSITIESAERVIVDHGWTEMGQGVHTVAVQTLCHETGIDPAIVRVRVDTAMRQEAGMTTASRATSLVGNAIINAAAKLRDDLQSHTLAELAGRVYEGAWVVDWTTKPGYEKDGKIVTHYSYSYATQLVTLDDDGRVAKITAAHDAGKIYNPTLFEGQLEGSLHMGLGYAISEDMPMEGGRPKSTRLRQMGILRAKEMPPMEIIGIEVPDPYGPYGAKGVGEIGLVPTAAAVANALYQFDGVRRTTLPMALPKRAKVVVRTGDGP
>NZ_LN890656.1|WP_095045135.1|279453_280080_-|hypothetical-protein
MNLKPIAASLPRLAAVLGVNTIPALGWLRETWSAEVAMLLYYLETVAVILLVGAMVRLIVPAVDERGVSIAGERNRLARSYVFFMLVFAAGIGLFLGLALWRLLGVPIPWRSVGVAMAVIIVLQLVAYGWEAYRLRPLDIADAERLVNRDMGRITILHLGVLFGMFLAAARLAWFVWPFIILKTMVDVAGLVDQMRRKWREANEADAQ
>NZ_LN890656.1|WP_095045134.1|276998_279143_-|hypothetical-protein
MKLIRPTLAALIVALTLGLGLAPSGGAAAPLDIEPVPLPVWRHEVVDPGVAFTYLGVPSLALDPDGRPHAIYGQNGLFHTWRDAAGWQTETLLAPPAIVGQSAIAIDDAGRIIVVYETGGQVTVLARPPGGAWAMALPLPLPVGLHDLSLALDSAGRPHVAAGYSDDPAQSTIYLAAETAAGWTVEPAGAGHIVAAAVRLALDSHDRPVLLYGQVSSGAADNTLWLARQDDGGGWQREAVAQGCIISSKSLALDGQDMAHVVYSEHCDRRLSYARELEEDWDVALLADDGVWPSLALDAAGRPHVVYGVLDTGQVYAVLTDAGWETTVIRPGVNPELHNTLLLDAAGAAPPVAHPVAHIAAIDGDLLYTSNAGGAWQTTPLAAPETAGTHNALGLDSADTPYVFYDKAEAGELWWGTKTEPGWTTERLAEVATLNLEIAAAVDTQNRPHVAYLDAGAGQLVAGVREVGAWSWATVDDSAAGTHLALAVGSDDRPQLILVRDGDVVYWFKDGDEWQSEPAGGPNVMVSNAWLALDSLNRPHVVYSGGAAATYAVRLPDGGWAVETLPFNSVGGLALGPGDKPYLLHVTATGGRSGVDYAQSTLRLAEQVGAAWLETPLATYTAWSNPRATLAVSDQGEVYVVYRDVMGDLHLRQRDAAGVWQSVAETWGTGEDSALLMGHDGQPRLLTHYRSSLNLWTREIRLLDRHVLLPIVTR
>NZ_LN890656.1|WP_095045133.1|276508_276769_-|type-II-toxin-antitoxin-system-RelB/DinJ-family-antitoxin
MSKTTSVTARIEPELKENVEVIFDRLGLTTAQAITLFFRQVEMYKGLPFAVRVFSAETIAALEESENYQALPAYANVDDLFAALES
>NZ_LN890656.1|WP_095045132.1|276242_276509_-|type-II-toxin-antitoxin-system-YafQ-family-toxin
MRTIRYTAQFKKDFKLAQRRGRNIKLFKEILTALANDQPLDVRYRDHALMGRYSGTRECHVQPDWLLIYRLTEEEVTLVRLGSHADLF
>NZ_LN890656.1|WP_095045131.1|274896_276240_-|cytochrome-P450
MMTIPSPKGPPLIGQARELIAGAPRFTSRLADEYGPIVRFSVFANHFYLIADPELAREALVTQAANFPKDERDVMILSRMIGHGLVTTNGEAHKRQRRLTQPAFHTKRIDAYAGTMVDYTEAMVDEWADGRTLDAAEAMRELTMYIVAQTLFGADRVTMRATAERVGAAIHTLQDVANSEFSAPLVLPTWLPTAMNRRRRAAKAVLDDTIDRLITERRANTADRGDLLSMLLLSQDESGDRMSDAEVRDQLLTLFVAGHETTSNALAWTWFLLGQHPAEEARLHAEIDAVLGHRPPALADLPRLPYTLQVIKEAMRLYPPAWVVNIRRAAADTTLGPYPIRRGERLWISPFVMHRRPAFFPDPERFDPDRWTPERERALPKYAYMPFGGGPRVCIGNGFALMEAHLIVTAVARRFRLRLLPGVGEDLNAQVTLSNHGGMPVRLEARG
>NZ_LN890656.1|WP_095045130.1|274115_274787_+|DUF2726-domain-containing-protein
MSRWFSRFWAWLSQLFDFDRRPPGYGRRETDGLPRANQRRQTTDDRPPTAADTPPALSAAPTPPVAPSIPPPIAPPLPLETDEPPRYVKSKSVLTYQERRLYLGLLRAVENRYQILAKVRLADIVYLANLPRDSKMHRNRVLCKHVDFLICQPGTLAPLLVIELDDSSHAYPDSMARDAFKNELFAAVGLPLLRLKIQSGYTARYLREEIDARLNVVEPPFSE
>NZ_LN890656.1|WP_157913320.1|286738_289882_-|DNA-polymerase-III-subunit-alpha
MTNDLPADFTHLHVHSHYSLLGGADAPAALAARAAADGLGALALADTALFGAVAFARACRAVGVRPIIGLTVAMAPPPEDMPPDRSSALGRLVLLAAGPAGYRALCRLSSLVQCDPDRARRARAGLGWDELRDGLGSDAAGLVCLTGGRACWLERYLRAGQTAAAGRYVARLGGLFGERCALAVGPELLDGALRPVADQIVALAGRFGLRAAAVQPIFCLSPDDRPLLRLMAALDANRRVADVDPGALPDCGDAAVPVEWPAPDTFAARYAAHPDLLAAAGEVAAECGEALPDGRPLWPALPVASPADELRRAAAVGLAARYGDPSPSPVAERLARETAVIVAAGFAPLFLVVADLVRYARAEGIPVSTRGSVANSLAAYCLGITTVDPVAHDLLFERFLNPARRNPPDIDLDFCSRRRDEVLDYARRTYGPDRVALVSTMNTLQPRSAVRETAKARGLPEATIDALVALLPQGWHPDPRRRPTETIDDVIAGLDDPQWQAALREAYRLVGFPHHAGLHPGGLVITPGPLTDTVPLLLSPKGYLATQYEHGDVEAIGLPKLDLLGIRALTVLADAAELVRLRRAPDFRLEDIPPDNPTTAAMLRAGDTIGVFQCESDGARRTLRQLRAANVADLAVAGAFFKPGPATGGMARAFIRRYRGEERVTYLHPALEPILGRTKGVLLFQEQVLRVATEIAGLDWAQADRLRRGMSKFQAAEMDALAAAFADGCCRPAPLGPGFGREQAARLWEQVMAFAGYGFNQGHATAYADVSYRSAYVKAHWPAEFLCARLADAGGFHHPAVYVAEAQRLGIAVRPPHVNYSGAAFTLTYEYDGDEDQPVLWLGLGEVRDLRQASIRAIVAARAAGPFAGAADLLGRVALSTKEIANLVRCGALDGLGASRAALLAAAGAAGRSAGAGQMSFDFMNVSAIQAESEADRVSWETEILGRPVSVHPLRLARARRGDVTLRRLPERPGRVVIVPAVRVLGWPGGAGFFAGDGDTFVIARPDKALAEQKVRWPVWRPMRLTGRWLSDEWDGGWFEVSAYELL
>NZ_LN890656.1|WP_157913321.1|290009_290285_+|hypothetical-protein
MSSNLDEVRRFADTLHAANQPWTGELFGWSAEYNPELAEPPIDSRLSFTPADFCIGESGVWFFSRQWENCRDAAPVEFLDERNVVRETFRS
>NZ_LN890656.1|WP_095042686.1|290319_291657_-|transposase
MNILALLQPLRPIVSQTTMRQMSVLMGAMLAMTGRVTMLGMARWTDKGGSYRSVQRFFQTTIPWTQVMWAFFRDHLHQAGDEYLLVGDECVVSKSGKETHGLGRFYAPLWGRPVSSVALFALSLVNPRERRSYPVMSEQVPSQEGVNREVKPRTRRKKAAAQSSAGRPGRPPGRRNSIKTEVTLTPELTRIQTMVKQFLAVVDQRLKLTYLVLDGHFGNNNALQMVRQCGLHLVSKLRHDAALYFPYQGDNKRCKYGAKVAYDNLPASCWQQTIIDDGVHTDIYQATLRHKAFAQPLNVVILLKTRPTTGAQARVLLFTSDLALNWSQVLEYYQLRFQIEFNFRDAKQYWGLEDFMNVKKTPVTNAINLSFLMVNVSQVLLQDLRREDPAVNVLDLKAHYRGHKYVAEVLKLLPQKPDPVFTEAIFDRISRLGRIHPPQPALCPS
>NZ_LN890656.1|WP_157913322.1|291794_292220_+|pilus-assembly-protein-CpaE
MIPLSLAQQLKSAGLIWRTNNYDFFAIPERGLDDRVFVLADMMAYTELVQGWPVVAFHGTAEWALDYILTSEVVWVPTEEQLRLALLEQLRAAGDEAEFSLEAGAEGYRLIIPGHGEPLFIAAPTAGEAYGQALLHLLRQP
>NZ_LN890656.1|WP_095045143.1|292317_293274_+|polyprenyl-synthetase-family-protein
MDLTLTQDGLRAIETLLHDSIDSEVELLNDASRHILSSGGKHLRPHVALLAYLAAGGDDLHEAVSMAAAIEMVHTATLVHDDINDHALLRRGRPSVHARWGRTFALLCGDYMFAKVYELMAPYGPTYNVIMARACTQLVEGETLQAVAAKAGAIDRETYKRIVALKTASLFEGAARMGALLGGGDERTVEALAVYAYNLGIAFQMVDDILDVVGDPAALGKPVGTDLAQGRGAFVAQNGKTILGLQPAADGAAVAEVDEEDPIARMMSKLRSSGAIEAARLQALEMIDRARLALDDVPPSPARDELLSLTNDVLNRDH
>NZ_LN890656.1|WP_095045144.1|293353_294703_-|magnesium-transporter
MLYTDLEDILGKVRASLEMEDVAGAVAAIEALRAPDQADLFHELEDEHQTALLPRLDPEDSADILEELEDEDAARIVATLTREEAVRIIDEMEPDEAADLIGELEPEHQEYVLAKLEDQAEVRPLLLHPEDTAGGVMTSEFLALGRRMSVADALAALRTWKPDAEDIHEVYAVDRFGRLVGMIGMRQLLMQQPELILNDVIDPETVFVSVAADQEEAARLMSRYDLASLPVIDTQGVLVGVITVDDVIDVLEEEATEDFQRFGGGEPLDRPYLESGVLTVVRKRVGWLLLLFITETLTGSVLRHFEEQMAAVVSLAFFIPLLIGTGGNAGSQTTSTIIRALAVEDLDKRGLLRPLLHELMVGVVLGTILAVVAYGRAILWGTGEAVALTVAVAIFAIVIWANVLGSVLPILASRLKIDPTVVSGPAMSTLVDATGLFIYFTVAGIILAI
>NZ_LN890656.1|WP_095045145.1|295041_295902_-|ABC-transporter-permease-subunit
MRGFWTEFIHTLRRLRGQILGWGSGLALYGLAMGAMYDTVQNMTGLQEMLAGYPPELAAFFGDLANFNTPAGYFGTYYSSYMPLIIGIFAVAAAAGLLAGDEERGTLDLTLAYPVGRTALFWGRWLGFVVAAALVMFIGYLGWAVTLPLTGMEVTFAALLGAHLPILALLLLFGGLSLLLSMILPSARLAMTVAGGLLAANFLLVGLANLNEALRPIMDLTPFAFFQAGEALTDLNWGWIVGLTAVAFLLAAGAWLLFRRRDIRVGGERGWTWRRRESTDFTDFTD
>NZ_LN890656.1|WP_095045146.1|295916_296807_-|ABC-transporter-ATP-binding-protein
MTADPAISLHGLTKSYGRIPALRGVDLEVQRGEIFGFLGPNGAGKTTTIRCLLDLIRPDGGTARVLGLDPQADAAAVRRRVAYLPGELSLEANLTAEGILRYLAELRGAAVGFERVRELAGRLHLDLRTPIKNMSKGNKQKVGVVQAFMAPAELLLLDEPTSGLDPLMQQEVYRLVREARDGGATVFFSSHIIAEVEAIAERVAIIRDGRIAGVLDPRELVALGKRRVRLRLRQPLPDGALAGVLGATQIERDGATVTLEIEGEMDALIKALGAYTVIDLETERPSLEELFLTLYR
>NZ_LN890656.1|WP_095045147.1|296796_297084_-|DUF433-domain-containing-protein
MTATATLDGLIVHDPLLHNGRPILAGTATSVRAIAALYKLGLGPEEIAGELPLTLAQVYAALTYYHLHSEEIETDLAADSEERLIAEYGDFINDR
>NZ_LN890656.1|WP_095045148.1|297143_297560_-|CoA-binding-protein
MTDPQAETIHHILTTYRTVAVVGFSDRDRRKAAFYAPAYLKGHGYTILPINPRLTTGLNRPAYPTLADAPGPIDVALIYAAGERVGPLVDEAIAAGAKAVWLPIGVVDEAAAARARAAGLLVVMDRCMMVEHKHLDVV

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Crispr_ID: NZ_LN890656_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_3

404623-404736

Orphan

Consensus_repeat	Method
CCTCTCCCAGGGGGAGAGGGACCAGAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_3

>merge|NZ_LN890656|3|404623-404736|CRISPRCasFinder
CCTCTCCCAGGGGGAGAGGGATCAGAGCGGAACCCTCTCCTAGCCTCTCCCAGGGGGAGAGGGACCAGAGCGGAACCCTCTCCTAGCCTCTCCCGGGGGGGAGAGGGACCAGAG

>NZ_LN890656|3|3|404623-404736|CRISPRCasFinder
CCTCTCCCAGGGGGAGAGGGATCAGAG	CGGAACCCTCTCCTAGCCTCTCCCAGGGGGAGAGGGACCAGAGCGGAACCCTCTCCTAGC
CTCTCCCGGGGGGGAGAGGGACCAGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045217.1\|403925_404558_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045222.1\|409991_410657_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_LN890656.1\|WP_095045212.1\|398452_399181_+\|2-phosphosulfolactate-phosphatase	unknown	unknown	gnl\|CDD\|377205
NZ_LN890656.1\|WP_162292532.1\|401017_402259_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340861
NZ_LN890656.1\|WP_157913335.1\|399185_399677_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|183954
NZ_LN890656.1\|WP_095045214.1\|399673_400564_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_LN890656.1\|WP_095045220.1\|407954_408830_-\|amino-acid-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223836
NZ_LN890656.1\|WP_095045211.1\|397706_398237_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045226.1\|413480_414587_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_LN890656.1\|WP_095045224.1\|411914_412628_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_LN890656.1\|WP_095045225.1\|412747_413458_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	unknown	unknown	gnl\|CDD\|224931
NZ_LN890656.1\|WP_095045221.1\|408903_409761_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|270431
NZ_LN890656.1\|WP_095045227.1\|414583_415720_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|334323
NZ_LN890656.1\|WP_095045209.1\|395756_396566_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_LN890656.1\|WP_157913336.1\|404946_407094_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226406
NZ_LN890656.1\|WP_095045684.1\|400595_401006_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LN890656.1\|WP_095045210.1\|396640_397522_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_LN890656.1\|WP_095045223.1\|410789_411776_-\|class-II-fructose-bisphosphatase	unknown	unknown	gnl\|CDD\|236536
NZ_LN890656.1\|WP_157913390.1\|407169_407937_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224051
NZ_LN890656.1\|WP_095045216.1\|402258_403629_+\|beta-glucosidase	unknown	unknown	gnl\|CDD\|274539

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045222.1\|409991_410657_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	9.79202e-111
NZ_LN890656.1\|WP_095045212.1\|398452_399181_+\|2-phosphosulfolactate-phosphatase	gnl\|CDD\|377205	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase. Thought to catalyze 2-phosphosulpholactate = sulpholactate + phosphate. Probable magnesium cofactor. Involved in the second step of coenzyme M biosynthesis. Inhibited by vanadate in Methanococcus jannaschii. Also known as the ComB family.	6.73813e-27
NZ_LN890656.1\|WP_162292532.1\|401017_402259_+\|hypothetical-protein	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.71893e-83
NZ_LN890656.1\|WP_157913335.1\|399185_399677_+\|DinB-family-protein	gnl\|CDD\|183954	PRK13291, PRK13291, putative metal-dependent hydrolase.	7.15258e-14
NZ_LN890656.1\|WP_095045214.1\|399673_400564_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	6.89518e-11
NZ_LN890656.1\|WP_095045220.1\|407954_408830_-\|amino-acid-ABC-transporter-permease	gnl\|CDD\|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.34458e-78
NZ_LN890656.1\|WP_095045216.1\|402258_403629_+\|beta-glucosidase	gnl\|CDD\|274539	TIGR03356, BGL, beta-galactosidase.	0
NZ_LN890656.1\|WP_095045225.1\|412747_413458_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	6.75148e-23
NZ_LN890656.1\|WP_095045221.1\|408903_409761_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|270431	cd13713, PBP2_Cystine_like_1, Substrate binding domain of putative ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold. This group contains uncharacterized periplasmic cystine-binding domain of ATP-binding cassette (ABC) transporters. Cystine is an oxidized dimeric form of cysteine that is required for optimal bacterial growth. In Bacillus subtilis, three ABC transporters, TcyJKLMN (YtmJKLMN), TcyABC (YckKJI), and YxeMNO are involved in uptake of cystine. Likewise, three uptake systems were identified in Salmonella enterica serovar Typhimurium, while in Escherichia coli, two transport systems seem to be involved in cystine uptake. Moreover, L-cystine limitation was shown to prevent virulence of Neisseria gonorrhoeae; thus, its L-cystine solute receptor (Ngo0372) may be suited as target for an antimicrobial vaccine. The cystine receptor belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.32219e-63
NZ_LN890656.1\|WP_095045227.1\|414583_415720_-\|metal-ABC-transporter-permease	gnl\|CDD\|334323	pfam00950, ABC-3, ABC 3 transport family.	3.26615e-60
NZ_LN890656.1\|WP_095045209.1\|395756_396566_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.52108e-48
NZ_LN890656.1\|WP_095045226.1\|413480_414587_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	2.93612e-52
NZ_LN890656.1\|WP_157913336.1\|404946_407094_+\|hypothetical-protein	gnl\|CDD\|226406	COG3889, COG3889, Predicted solute binding protein [General function prediction only].	0.000837416
NZ_LN890656.1\|WP_095045684.1\|400595_401006_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	3.14952e-10
NZ_LN890656.1\|WP_157913390.1\|407169_407937_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	1.46678e-146
NZ_LN890656.1\|WP_095045223.1\|410789_411776_-\|class-II-fructose-bisphosphatase	gnl\|CDD\|236536	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed.	0
NZ_LN890656.1\|WP_095045224.1\|411914_412628_-\|isoprenylcysteine-carboxylmethyltransferase-family-protein	gnl\|CDD\|224931	COG2020, STE14, Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones].	5.76343e-23
NZ_LN890656.1\|WP_095045210.1\|396640_397522_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.2624e-55

>NZ_LN890656.1|WP_095045217.1|403925_404558_+|hypothetical-protein
MHKIMMLAALLIALLAACTTGGQTEPDVDSAGETADSDGPALELVTPTSGDDYPAPDSDDAYPPAPDLANMPTGYPELTVVAPSGEIDLAELTPAPPALGTPQVMPAPGRPGAVPPQLAVMIETIRLHLSRQSDHAVEAINFVSAEAVTWPNGALGCPAEGLSYIEVQVEGARITLEAEGETYTYHTDGGRNFVLCREGRPVSTGVVPQR
>NZ_LN890656.1|WP_095045216.1|402258_403629_+|beta-glucosidase
MPIDLPPGFLLGAATSAYQIEGGRDADGKGPSIWDHFSHRRGRIRHGHNGDHACDTYRDFQTDIDIMRQLGLDAYRLSVSWPRVMPEGRGRVNEKGLDYYERLIDALLAAGIAPFVTLFHWDLPLALHRERGGFARREGAEHFADYAAVVVGRLGDRVSHWITLNEPWVYATFGHMAGNHAPGRRNPWAYLRATHHQLLGHGLAAARIKALRPAAQVGISLNLTPAHPATPRAADRQAAALADQMVNRLFLDPLFHGHYPEPYWGKLRLFRPTVRPDDMAIISNSLDFLGVNYYTRARVRHHRLVPLVQLWPETLPAVATEGQVAAGVEYSRMGWEVYPAGLFELLFRLKKEYGNPPVYITENGAAFDDVVTADGRVHDEQRRSYLAQHLAVTGAAARVGVDVRGYFVWSLLDNFEWTYGYNKRFGIVHVDFASQRRTIKDSGLWYGELIRGKRKN
>NZ_LN890656.1|WP_162292532.1|401017_402259_+|hypothetical-protein
MTRQKILILTADAGFGHRSAANAICRALELRYGEAAHTIIVNPLDEPGAPPFMRGAENDYDKLAREWPQFYKLGYKMSDMSLTTNVTEMAYVMMMYDVIARLMKQHAPDIVVITFPTYQYPVAAHRRLTNSAIPIATIVTDLVSLQKMWFSQSVDLCLVPTAIAARLAVERGLDADLVHVTGLPVNPALADVPASKAAARRALGWPEDKFTVLAVGSKRVERLDAFVQVLNHTGFDLHLVAVAGGNETLYQSLQATEWHVPTTVYDFVRNMPDLMHAADCLISKAGGLIVTESLACGLPLILTQFIPGQETGNVRFVVEQGAGELALEPLALLETLAHWLADDRQLFHERAANARRLGKPEAAFAAADLIWQTAQAGATQRGRRFPISRDKMKALLRQFGGDRWSSPDRGLTA
>NZ_LN890656.1|WP_095045684.1|400595_401006_+|GNAT-family-N-acetyltransferase
MELLDAADPADVEFVHNGLRGYNAQYAPSEFAHLYVFLRDEAGTLVGGLLGGTFWGWLAVDILWLDERYRGQGYGERMLAAAEAEGRRRGCAHVQLDTLSFQARPFYEKLGYRVYGELEDYPAGTGHKRYYLTKQL
>NZ_LN890656.1|WP_095045214.1|399673_400564_+|GNAT-family-N-acetyltransferase
MTTEARLRIVRCHPSRLDALVAFVAAHNGAPEHHIGYFGLSADDVRQSILMLNLRYDRGFRLALRGNHLVGVLGVDFDREIGRAWLYGPLVIDADWAAVADALYDAARQGIPAGIVEQQLFIDAANQNGGQFAARHGFHEHGAWAIYGITPQRMDALPAAAAEPWDAAYADQLAALHDELFPGSNYTLSYMLSELAKGGILWLLTDNGRLAGYFFGRAEPESGEAYVDLLGVAADYRRQGLGRQLVLAGLSALRPMPGLRQVSLSVAAGNEAAMNLYDALGFIKERDMVAWQKRDE
>NZ_LN890656.1|WP_157913335.1|399185_399677_+|DinB-family-protein
MSDPLRQAKIESYGQAHGRLENALRAFPPGMWTYRPDASDWTIHEIIIHIADSEVNSYVRCRRLIAEPGSEVLGYDEAGWARRLDYHRQDTAMALELFRLLRRGSYELIRDLPDGVWAHTVVHSDSGRMTFDDWLDTYERHVPEHIAQMRAIYETWRLEQEGS
>NZ_LN890656.1|WP_095045212.1|398452_399181_+|2-phosphosulfolactate-phosphatase
MYTDQTFDDVRCEWGERGVAALAPASDVIIIVDVLSFSTCVAVATGRGAVVYPFAGEGAAAFTQAHDALLAAPGRPREGYSLSPHSLLTLPDGARLVLPSPNGATVTLAARRAAPNAVILAGCLRNAAAVAGAAAGLGRRVAVIAAGERWPGDGSLRPAVEDVAGAGAIIAQLPGTRSVEAQAAVAVFEAARGDLPGFLRRAGSGRELIERGFAEDLALAAELNADACAPRLMADGAYAWRR
>NZ_LN890656.1|WP_095045211.1|397706_398237_-|hypothetical-protein
MIDRNTFTVEEWAQIIAVPASVGALVVTADPSGPIGLLNEFQAIMKSMKKYVDAHAAASPLMAAFQSYMATKPSQEEEAELKQWAETQQAEMKTDRPQNPEEMKQYVRDKVGESLTTLRAKGADEADVSAFKAMMIAVAEATAAASKEGGFLGFGGVRVSEAEQSVLDQIKAELSA
>NZ_LN890656.1|WP_095045210.1|396640_397522_-|sugar-ABC-transporter-permease
MNHDRRLRLLLLPYAVGLVLLFILPALLSFGLAFFRYDALSPPRFAGLLNFQLARTDELFGLSIANSLALVVLPAPLRVTGAFLAARLARGGRLRHLLRAAVFLPSAVPASAFALAWLWILNPLYGPLNRLLAAVALDTPGWLADGQWARPGIALALLWLVGEGFLVCLAALYDVPQELEDAAAVDGAGTWATLRHVLLPLLAPVLLLLLARDAVLLLQDTFSLTWLLTGGGPYYATYTLPQFIYEAAFDRLDFGVASAALWVLYVLTGLILAFVYVVARQWQVGLSEEEFLL
>NZ_LN890656.1|WP_095045209.1|395756_396566_-|carbohydrate-ABC-transporter-permease
MFLAAFRPPGQPLASALWPARPSLDNFQRLFAVLPIGRFTLNSLLVVVAAVPLTLLTASWAGFAMARLPRPTQRRWVLLSFMALMVPGVALWSSRFLVYHRLGIGGTLAALIAPALMGSSPFFVLMFYRAFRRIPSAVYDAARLDGAGVLATWGRVALPIARPTAVAVAVLTFILYWGDFLSPLLYLDDARRYTLPVGLQLLEQLGRSDYPLLMAGAVWATLAPLALVVVAALAVALVERQHVGRVGNPPLQPPHTNPLLQPKPSDDAP
>NZ_LN890656.1|WP_157913336.1|404946_407094_+|hypothetical-protein
MLSRISRIVLVIGLIIGGVWLATRTARPALEGAARVQAVQLAAPGARVAAGANNQPVPELAIAQPVTVDLSTIPAGVLDPNNQYDRWQRGEIDLLEDENILPPAEMAALRHAAMNLPPSSNISSAAPAEGVAPNAPAAGASFDSIDYTECCGGGGNVPPDPELAVGSNHVIAVVNVAFEIYNKAGTSVVGPTTFSSFFASNANCTGVFDPNALYDEEADRYILGIDAAGFYYCVAVSQTNNPTGSWNIYAFPTASGNDFFDYPHAGVGRDAIYMGANIFGATSFKESRVWAFNKWSMYNGQPAASANKGLPTSEDTPQPLNLHGFAQGTWPSSGPHYFFTETNFNGANYSVWQWANPFTGTSPTKVGSTLNLTTYTGVAAGMPVNVPQSGGSAIQANDYRPQDFEYRNGYAWSISTIACNPGSGTVNCIRWAKINPATATIVDAGVYGSNGQHRFFGDLAVNHCDDMAVGYTKSSTSMWPSIFYTGRKAGDAAGTLQAEAQLKAGEIAYTAFDTVPRRWGDYTEMTIAPDGVTFWYLGEYSKITGSTGGRWGTWIGSFSYADCTTGPGPSPTPTLTPTITPTPTITPTPTITPTPTNTPTATVMHVGDLDGVSVLTNNGRRWQATVTIKVVNQSNAPVSGAVVKGNWRNGASGNPSCTTNASGMCSVVKGGLRNNVNSVRFNVTGVTKSGATYNAAANTDPDGDSNGTTIVVNEP
>NZ_LN890656.1|WP_157913390.1|407169_407937_-|ATP-binding-cassette-domain-containing-protein
MVQVRGLDKYFDDLHVLRDIDLDVAAKEVVCIIGRSGSGKSTLLRCLNFLEQPDFGVVEIDGVRVTCGGHSREWRHQVHDLRLKTGMVFQSFNLWGHMTALENVIEGPITVKKMARAEATELGMHNLTKVGLADKAGQYPSRLSGGQQQRVAIARAMTMQPKVMLFDEPTSALDPELVGEVLAVMQKLVEEGMTMMTVTHEMSFARRFADRILFMDNGRFVEIGPPEELFDNPQDERTRQFLSHLHIHQPREHLH
>NZ_LN890656.1|WP_095045220.1|407954_408830_-|amino-acid-ABC-transporter-permease
MSITADPPGAPPDNERLRSQAEQLTQRRRSRARRFSAGVRLSYVALLLFLAFLFSGFRFEAGGLTIRTIQLDWEFIRTYAPFIIKGVWLTILLSILAIALSIVLAVAGALGRLSKSPPAYALATFYVSLIRGTPLLLQLFFIFLALPQLGIVLGGMTAGVLALGINYGAYNTEIVRAGIQSVGVGQREAALAIGMTNGQIMRRVVLPQALKLTIPPLGNQFIAMLKDTSLVATTGFVWELLWRAQKVGRANFRSLEALLIAAVFYWIITIIFSAVQDRLEARLARGERTLS
>NZ_LN890656.1|WP_095045221.1|408903_409761_-|transporter-substrate-binding-domain-containing-protein
MKRLIPVLLVVLLLSLVGCTAGGGGGNDLLSDIEGRGVVRVSTDPNYEPQSFLDENGEFVGFDIDVAREIGERLGVEVEFITPDWDVITAGNWAGQWDMSVGSMTVTTARQEVLDFAEPAYYFTPAQFAAADGSGIDALEDVNNQAVCAGVSTTYETWLNGAAADLGLPETSFYADPPTGITVIPLATDAECPQSIQAGRQEFQVFLSSNTVVQAAIDGGLPIHRVGSPVFSENLAVAFDKGAELDNASAVQRVGEIIQAMHDDGTLRELSLKWFDSDLSASPTQ
>NZ_LN890656.1|WP_095045222.1|409991_410657_-|ribulose-phosphate-3-epimerase
MRTIHLAPSILSADFTCLGAQVEEALVAGADYVHVDVMDGHFVPNITIGPLIVEALRPVAVRHGAVVDVHLMIEKPERYLADFARAGADILTVHVETCPHLHRTVQAIRELGVRPGVTLNPATSLSTLEEILPFVDLVLIMSVNPGFGGQSYIGPSTDKIRRLRAMLDAIGSAAELEVDGGIKPGNAPEIVAAGATVLVAGSAVFGGPRTIAENVAAFLRP
>NZ_LN890656.1|WP_095045223.1|410789_411776_-|class-II-fructose-bisphosphatase
MSEAPDRNLALELVRATEAAALAAARWVGRGQKEEGDGAAVDALRLLLGTVRMNGIVVIGEGEKDEAPMLYNGEVVGNGSGPLVDVAVDPVEGTNLLAKGLPNSISVVAIAPRGALFDPGPAFYMDKLVVGPEALGKVDIDATTADNLAAVAAAKGLDVSEVTVVILDRPRNKATIQAIREAGARVRLISDGDVAPSLMTALPGTGIDVVMGIGGTPEGVITACAMHGLGGEIQARLAPQSDGERQRLAEAGIDIGRKLTLADLAAGDEHFFAATGITQGDFLRGVRYTATGAVTHSLVTRSRSGTWRTIEAFHRWDKLMEISKVEYA
>NZ_LN890656.1|WP_095045224.1|411914_412628_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MSHLTSQAPREGLNEDGRRRLVQVFGMVVVYALCLFIPAGSLRWWNAWAYLGLFVGATLTAGLYVIRKNPAAINERGRPSAKTKSFDKVFAALTPPLHLGSLVVAGLDYRFGWSTVPLWAQIVGFIGLLPGVLVPYWVMLVNAYAATTVRVETERGQHVITTGPYRIVRHPLYTAVVLGYVFAPLAFGSWWMAAPAALLVGLFVWRTVNEDRTLQEELPGYREYAQKTRFRLVPGIW
>NZ_LN890656.1|WP_095045225.1|412747_413458_-|isoprenylcysteine-carboxylmethyltransferase-family-protein
MTSTTQQSPTKPRLNRDGARLFIGIFAFQAVQAAVLFIAAGTVRWPAAWAYFGVYALCYALGLAWVASVNPAVINERGRRSTNTEEFDQRFHRLMPLLLFGGLIVGGLDHRFGWSAVPGWLQIVGLALLVPALLLAVWVLASNAYAARVVRLQDGHQVISTGPYRYVRHPMYSGTLLAFVAAALALGSWWMLVPAAAGIVLFVWRTAHEDAMLQEKLPGYREYAQRTRYRLMPGVW
>NZ_LN890656.1|WP_095045226.1|413480_414587_-|metal-ABC-transporter-permease
MSAATEIQLIAVIVAVACALPGVFLVLRRMAMMSDAISHTVLLGIVLGFFAIGSLESPLLVLAAAGMGVITVSLVELLLRTRLVRQDAAIGLVFPALFSVAVILISRFARGVHLDVDAVLLGELTFAPLDRVDIGGVDLPRSLVVMGLILLINVVVIGLFYKELKLTTFDAGLAAALGFSPALIHYGLMVMVSVTAVGAFDAVGSVLVVALMIAPASAAYLLTDRLSRMLLYSAALAAAGAIGGFWLAWFLDANIAGAIAAVLGVLFLGAFLLAPQRGLAAQATRRAHQRWEFAQTALAIHLLNHEHTPEMSSECRVDHLHYHLRWEPNFASTVVDQAERGGLVWRNNGDLHLTDDGRARARTALVHV
>NZ_LN890656.1|WP_095045227.1|414583_415720_-|metal-ABC-transporter-permease
MIDLINSLFFDYTIRTVALGAAVLGIVAGALGTFALLRRQSLLGDAMSHAALPGVLIAFMLTGSKAPLVLVLGAAVAGVLGTFLLLTITRYSRIKEDAALGIILSVFFGFGLMLLTYLQRNPTAAQAGLNSFLFGQAATLLVSDVITMAVFGGAALLALVVLWKEFKLLSFDRDFGSSLGYPMTALDMALTTLLVIGVVIGLQAVGVVLMSALIVAPAAAARQWTDRLSVMLVVASTFGAIAGVAGALLSSLGTGLSTGPVVVLVISAIVLLSLLFGAARGLVWSWARRQRSRRTLRTQAVLADLYTLADKHGDPYYAHNYELLRAMNRYQGGVRHSLRTLAESGLVREAARGEWALTAAGLSQAQQLRQTGQFEAQL

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Crispr_ID: NZ_LN890656_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_4

480507-480635

Orphan

Consensus_repeat	Method
AGTAGCCAATTCTTCATCGTCTAAGAATTGGCTACGGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_4

>merge|NZ_LN890656|4|480507-480635|CRISPRCasFinder
AGTAGCCAATTCTTCATCGTCTAAGAATTGGCTACGGATTGATACGGACGATACGGATTTAACAGGTCAATCCGTTCTTTCCGTTTAGATCAGTAGCCAATTCTTCATCGTCTAAGAATTGGCTACGGA

>NZ_LN890656|4|4|480507-480635|CRISPRCasFinder
AGTAGCCAATTCTTCATCGTCTAAGAATTGGCTACGGA	TTGATACGGACGATACGGATTTAACAGGTCAATCCGTTCTTTCCGTTTAGATC
AGTAGCCAATTCTTCATCGTCTAAGAATTGGCTACGGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045275.1\|468174_469158_-\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_LN890656.1\|WP_095045292.1\|488881_489616_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226453
NZ_LN890656.1\|WP_157913341.1\|467100_468012_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318
NZ_LN890656.1\|WP_095045283.1\|480709_481522_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|212491
NZ_LN890656.1\|WP_095045279.1\|473291_475736_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045285.1\|482060_482804_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|143483
NZ_LN890656.1\|WP_095045282.1\|478414_479185_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_157913342.1\|479221_480385_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173847
NZ_LN890656.1\|WP_095045290.1\|487452_488100_-\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_LN890656.1\|WP_095045276.1\|469524_470610_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045288.1\|485671_486109_-\|D-tyrosyl-tRNA(Tyr)-deacylase	unknown	unknown	gnl\|CDD\|235383
NZ_LN890656.1\|WP_095045278.1\|471863_472511_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045284.1\|481695_481959_-\|YggT-family-protein	unknown	unknown	gnl\|CDD\|376765
NZ_LN890656.1\|WP_095045280.1\|475953_476802_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239473
NZ_LN890656.1\|WP_095045277.1\|470697_471837_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	unknown	unknown	gnl\|CDD\|236515
NZ_LN890656.1\|WP_095045291.1\|488192_488843_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226453
NZ_LN890656.1\|WP_095045281.1\|476954_478166_-\|BtrH-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379597
NZ_LN890656.1\|WP_095045286.1\|482998_483514_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_157913343.1\|483689_485129_-\|PQQ-dependent-sugar-dehydrogenase	unknown	unknown	gnl\|CDD\|225044
NZ_LN890656.1\|WP_095045289.1\|486188_487256_-\|glucose-1-phosphate-thymidylyltransferase	unknown	unknown	gnl\|CDD\|273500

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045275.1\|468174_469158_-\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	4.47178e-97
NZ_LN890656.1\|WP_157913341.1\|467100_468012_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	2.20491e-17
NZ_LN890656.1\|WP_095045283.1\|480709_481522_-\|SDR-family-oxidoreductase	gnl\|CDD\|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	1.81312e-56
NZ_LN890656.1\|WP_095045285.1\|482060_482804_-\|YggS-family-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|143483	cd00635, PLPDE_III_YBL036c_like, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes, YBL036c-like proteins. This family contains mostly uncharacterized proteins, widely distributed among eukaryotes, bacteria and archaea, that bear similarity to the yeast hypothetical protein YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. YBL036c is a single domain monomeric protein with a typical TIM barrel fold. It binds the PLP cofactor and has been shown to exhibit amino acid racemase activity. The YBL036c structure is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. The lack of a second domain in YBL036c may explain limited D- to L-alanine racemase or non-specific racemase activity.	3.68201e-90
NZ_LN890656.1\|WP_157913342.1\|479221_480385_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NZ_LN890656.1\|WP_095045290.1\|487452_488100_-\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	6.24771e-69
NZ_LN890656.1\|WP_095045288.1\|485671_486109_-\|D-tyrosyl-tRNA(Tyr)-deacylase	gnl\|CDD\|235383	PRK05273, PRK05273, D-tyrosyl-tRNA(Tyr) deacylase; Provisional.	8.63393e-91
NZ_LN890656.1\|WP_095045284.1\|481695_481959_-\|YggT-family-protein	gnl\|CDD\|376765	pfam02325, YGGT, YGGT family. This family consists of a repeat found in conserved hypothetical integral membrane proteins. The function of this region and the proteins which possess it is unknown.	2.3063e-10
NZ_LN890656.1\|WP_095045280.1\|475953_476802_+\|hypothetical-protein	gnl\|CDD\|239473	cd03378, beta_CA_cladeC, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.	3.77009e-35
NZ_LN890656.1\|WP_095045277.1\|470697_471837_+\|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB	gnl\|CDD\|236515	PRK09435, PRK09435, methylmalonyl Co-A mutase-associated GTPase MeaB.	0
NZ_LN890656.1\|WP_095045291.1\|488192_488843_-\|hypothetical-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	1.52609e-29
NZ_LN890656.1\|WP_095045281.1\|476954_478166_-\|BtrH-N-terminal-domain-containing-protein	gnl\|CDD\|379597	pfam14399, BtrH_N, Butirosin biosynthesis protein H, N-terminal. BtrH_N is the N-terminus of the acyl carrier protein:aminoglycoside acyltransferase BtrH. Alternatively it can be referred to as butirosin biosynthesis protein H. BtrH transfers the unique (S)-4-amino-2-hydroxybutyrate (AHBA) side chain, which protects the antibiotic butirosin from several common resistance mechanisms. Butirosin, an aminoglycoside antibiotic produced by Bacillus circulans, exhibits improved antibiotic properties over its parent molecule and retains bactericidal activity toward many aminoglycoside-resistant strains. Butirosin is unique in carrying the AHBA side-chain. BtrH transfers the AHBA from the acyl carrier protein BtrI to the parent aminoglycoside ribostamycin as a gamma-glutamylated dipeptide.	4.95222e-20
NZ_LN890656.1\|WP_095045292.1\|488881_489616_-\|hypothetical-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	5.36932e-12
NZ_LN890656.1\|WP_157913343.1\|483689_485129_-\|PQQ-dependent-sugar-dehydrogenase	gnl\|CDD\|225044	COG2133, COG2133, Glucose/sorbosone dehydrogenases [Carbohydrate transport and metabolism].	7.78318e-29
NZ_LN890656.1\|WP_095045289.1\|486188_487256_-\|glucose-1-phosphate-thymidylyltransferase	gnl\|CDD\|273500	TIGR01208, rmlA_long, glucose-1-phosphate thymidylylransferase, long form. The family of known and putative glucose-1-phosphate thymidyltransferase (also called dTDP-glucose synthase) shows a deep split into a short form (see TIGR01207) and a long form described by this model. The homotetrameric short form is found in numerous bacterial species that incorporate dTDP-L-rhamnose, which it helps synthesize, into the cell wall. It is subject to feedback inhibition. This form, in contrast, is found in many species for which it serves as a sugar-activating enzyme for antibiotic biosynthesis and or other, unknown pathways, and in which dTDP-L-rhamnose is not necessarily produced. Alternate name: dTDP-D-glucose synthase.	1.68264e-153

>NZ_LN890656.1|WP_157913342.1|479221_480385_+|acyl-CoA-dehydrogenase-family-protein
MFDFITEEHKMIQAAARDFARNSIAPIATEHDETGEFPLATVREMGRLGFMGIEVPEEYGGAGMDTIAYVLAMVEICKADASHGTIMSVNNSLYAHGLLKFGTEEQKQNYLVPVATGQKIGAYSLTEPMSGSDAGTMKSRATLNEAGTHYVINGRKSWVTSAPYADTVILFTMTQPDKGHKGVTAFIIDTDQPGFSRGKKEPKLGIRASATSEIIFDNYECPVANRLGAEGEGFKIAMTVLDAGRIGIASQALGIAEAALEASIAYAREREAFGQKIGEFQMIQQKLADMKCRVDASRLLIYQAALAKMATTRGGGRYSMEASMAKLFASESAMYVTTQAIQIHGGMGYSKEMPLERYFRDAKITEIYEGTSEIQRMVIARSLTGLR
>NZ_LN890656.1|WP_095045282.1|478414_479185_+|hypothetical-protein
MFASTPNPIVLHADQEHSGIRMAIFLSLFAALLIAFLLARWLLLLFAPPAIQDYTIFLACVGAVPLALLSIWVLEKGLKRVWHSGLSLVLDGRGLAVHDRRDGAVVDPTAPPAFLWAANMGQLNWYFRLSGYPRGGRERRAPAKWLCLATELQQDDVRLSIFTFMSPAAAKPWTDDPRQGYHIINPTELYDRSARSRIGPPTRPNIPHRLLQTKDARYWLAERRRWEFGIELTPDDFATLLRSVAAGRAGIVSYSP
>NZ_LN890656.1|WP_095045281.1|476954_478166_-|BtrH-N-terminal-domain-containing-protein
MTILEAYQQFDGRHWETGSVANYFAYRGLTAPHTGRPYSEALLLGVSGGAVMGYFSFAYEGYDPMARILTRNTFDPWDTMLSRLGVAQNVQHTAKPATAERNLLAALEEGTPALVWADVWGLPYNGLAFDDGMWAMFPVLVYGYDTAADRVLIADRARLGLTTTTGELAAARGRAKNNKHRLMTLEAPDPAKLPAAVAAGIGDCLRLYTEAPPRGSKNNFGLAACHWWAAQLTNPRGRTSWERVFPAGRKMLAGLSSVFTDVALFGLDKGDYAGRKLYADFLDEAAGILSRPGLHSAAGHFRTAAEAWRELTLALLPDAVEPLRLTRELLLRRHHAFLARGNGALDEMKAIDAQLDALMVAAEADFPLSAAEVVAFRQRLAEQVLAVHDVEAGAVAVLKDAMS
>NZ_LN890656.1|WP_095045280.1|475953_476802_+|hypothetical-protein
MTEEVVWEYDHELPYDDDQPRDAAAAGRRLLEGNATFARFFEPRPNTAPVRPILHLSPRNVGIGGAPGEAPTQAPFAAFLSCADARVPVELIFGQQANDLFVVRLAGNVLGEECLGSLDYAVERLATVRLLAVLGHTGCGAVTAAVDAYLSPAGYLGLAADLPLQAIIGRLMPPTHSAAIALAAVHGPTVVARPGYRQALIETTVMLNAALGAAVLARRFHDALSDRLQVLFATYDLGRRTVGLPDETGEWQPGLYAPPGEQGELEQLGRRLAASRLVAELL
>NZ_LN890656.1|WP_095045279.1|473291_475736_+|hypothetical-protein
MIAPILFTFAIATHVAIHVLERAPHVQDSVTYLFQAQTLARGRLTAPAPPLAEAEATPHFAQEFLLVRHGRWFGKYTPGYPMLLALGVLVRAPWLVNPLLAALAVAVMFPLSKELMGDRRRQTADHVLTGDRRRQTADHVLTGDRRRQTADHELTDDGRQSTIDTQKTTHTQITDPLPTHLLLPLLLALSPFFLIMSGSLMAHTAELWWTLLFMLAWARTWRGAVGQGAAGQSGQRGQRHWPVMSGSLTAHTAELWWTLLFMLAWARTWRGAVGQGGKRGQRHWPVMSGSLMARTTERWWTSLFMLAWARTWRGAVGQGRKRGQRHWPVMSGNLMAHTAELWWTSLFMLAWARTWRGAAGQGEQHGQRHWPVMSGRLITHTAERWWTSPFMLAWARAWRGAAGHGEQRGQRHWPVMSGSLMAHTAELWWTTLFMFAWARAWRGAAGHGEQRGQRRWPILAGIAFGLLFLTRPFTAALIGLTYGLTLPFIYAFPLRPRPPAPLPSSSPLRPRSPAPLPSSSPLRPRSPAPLLFLATAAPFLLALFAYQAAVTGDPLTDPRLLYWPYDRIGFGPDSGEPQNAFTFAPTAAGPAIQWLTDPSQPPRGHSPARGLYNLGVNLDALENILFGWPALFSLSFVWLAFLLRRPTPTDWLLLLMVAAVGAGHVAYWASGVAYGPRYLFAALPALIILTARGLGALAAVVGRRPTVVILVALAAYSLMTLPGRVASYRDYNFVDPGVRAAVAESVEPPALVFITASATDWWEYGAFFSGNTPWLDGPVLYARDLGPDENARLAREFPGRAVYLWRDGQLQTGP
>NZ_LN890656.1|WP_095045278.1|471863_472511_+|hypothetical-protein
MRRLTPLRFFWLASLGLALVYGWTLTERLTVTVSVADGRCTAVLYDRTSAIDCPGLGSGALLTYAERQPVAGFVPQAAWQVVELSAFGEALPPTAPLPTRFEATGRLARPYQPAGLIFQRPGETSGWAFVIDGPQRRGVWWTWREGALGEPLRGIPLDRPLTVQAQAFARQLLRGWWGAVGLVVVGLGLRVIGNRVGRWRKGGIGEQIQKDQSGD
>NZ_LN890656.1|WP_095045277.1|470697_471837_+|methylmalonyl-Co-A-mutase-associated-GTPase-MeaB
MPPDRSRKPEWTPDDGGEAFAARVLPGVAGGHDGLPSLATDADATPGVPAERPTRRPLSEDEYVNGVLAGDRAVLARAITLIESNAPAHLAQSQAVLRRLLPHSGRAIRLGITGVPGAGKSTLIEALGMKLIADGHRLGVLAIDPTSSLTGGSILGDKTRMEELSRRPEAFIRPSPAGGVLGGVARKTRETMLVCEAAGFDVIIVETVGAGQNEITVRSMVDFFLLVLIPGAGDELQGIKKGVVELADAIAINKADGDNRIRAEAARAEYNRALHYLTPAGDWRPRAYTCSAVSGEGIEALWQVIGRFRQRATESGAFEARRRAQARDWLRALVDEGIRAAFYDRPVVRAALAEVEAAVMDGTLPATTAAQQLLALLEE
>NZ_LN890656.1|WP_095045276.1|469524_470610_+|hypothetical-protein
MPERQNSASSTWWFFLLFPEGPDGYGPRQLMFTIATRAGGRMRIADVPLQGFDPHRSLAAGIDRFEAAAVGWYSDGRGVYDDYLRHAGPAVLDLPGGSLTCAAHDQPEYAMTFRTPRGGRPTLAADIRGPGGSASFETWGDLDATISSPVVSMDITTPFGGTHYIGWRRLNFRGRFDLPDGPETLQGIGFFQRVCLNVPTFPWKWIWAAFPDQSIFTAYVPYLGLNLFRKGYKFFRSNRLEQATLSITQSAAWIPPGAAEPVLFNRMAATPVLGRGPHPEFEINARNAAGDHIAFTAAPYGLSRFYIDRPILGGLVESHWNYNEYMFRMENLRGSVAGRPLSREQNGQAFGSLEYTYGLGL
>NZ_LN890656.1|WP_095045275.1|468174_469158_-|magnesium-transporter-CorA-family-protein
MINVYHDTGGWIVPADEIAKGTWIHVEAPTAEEIERLHQKLGVPMNFLKAATDPREVARTDSQKNVHLIIVRTPYDFGEEGPTPFRTLPLALIILPDYFITICHKPIDFVRDLNYIYDELDLTTHRSSQMIIAILGVVGDWFLLYLEEIDKRLEDVEQRLRDSIENSEMLEVLRYEKSLVYMKTGLQWNDQMVEHLQGKDYFGWNKEDQGMFEDVQVEYRQGYYMAETMLTMLGATTDAYASLISNNLNVVMKFLAAITIVLTVPMIIFSFYGINVALPGEDVPSMYLVVILVSLALTLVVAWWFRRRGWMSADGRRAGRGHTHRQR
>NZ_LN890656.1|WP_157913341.1|467100_468012_-|endonuclease/exonuclease/phosphatase-family-protein
MPAVVVALLLLFLMSCRDAKLPATLAATLPGVADETGMAMGLFNRTKNHSDEAGPLYRGNFGVAPDAALDEWVVVSYNLRYGEAITETIAAFQSIAPLPAADVVMMQEMHESGVSAVAQALGYNYVYYPASVASHGDNFGNAILSRWPISDPAKIILPGLHPLTGQQRTATRATVSIGDADAGTEEVLVYSVHAETATAPRSLRRAQYEAILNDIPADATRVIIGGDFNTVTGRGVNQLAQLFDAGGIDHASAALGPTFTRFGLRPSATDHIFYRGFEWQDAGVLGHITASDHFPVWARLAVP
>NZ_LN890656.1|WP_095045283.1|480709_481522_-|SDR-family-oxidoreductase
MKVNNKVIVVTGAGSGMGRALVLALLKRGARVAAADLNETTLNETYELAGPQRDKVSRHVVNVSDRAAVAALPAAVIAAHGAVDGIINNAGIIQPFVRLNELHYDAIERVLNVNLYGVIYMTKAFLPHLLTRPAAHIVNVSSMGGFFPVPGQSLYGASKAGVKLLTEGLFSELTETNVRVTVVFPGAIATNISQNSGVVIAAPAAATDDAAQSFPTTSAEDAAEIILNGIENDAFQVYIGNDAKMMNWLYRLSPKRATRFMYNRMKQLLG
>NZ_LN890656.1|WP_095045284.1|481695_481959_-|YggT-family-protein
MGAVTVINLIFNIFYLLILAHIVLSWVRPNPYHPVWGPIIRIVNGVIDPIINPVRRLLPPLGGLDFSPMIVLLLARVIQGALINLVV
>NZ_LN890656.1|WP_095045285.1|482060_482804_-|YggS-family-pyridoxal-phosphate-dependent-enzyme
MIDVDEIRERRAAVLGRMAAAAERSGRPAEAVTLIAVTKTWPAELVIAAHAAGLRHVGENRPEELAAKRPIVEAALGAECGLVWHLIGPVQSRKADLAATHADVFHALERDKIARRLAAARPNGRPLPCFIEVNVSGEAEKHGLAVARWETDATQVANLRKMISDTAAQPGLPVVGLMTMAPWDAPPEVIRAVFRRTRALAEQVTDLLPQPGGPRLSMGMTDDFEIAIEEGATHVRVGRALFGERGL
>NZ_LN890656.1|WP_095045286.1|482998_483514_-|hypothetical-protein
MILPKKRDPRFITLRRGGTLQDAAHHLLALWAADCAAHVLPLFEAERPSDDRPRRAIALGRAWTRGEVTMTAARTAAGHANAAARELSGGPRFAAYAAGQAAAVAHVAAHQLGAAAYAIRAARAAAPADEAESAARRECQWQRAQLPAAIRALVLDDMRLRNDICWFVFDC
>NZ_LN890656.1|WP_157913343.1|483689_485129_-|PQQ-dependent-sugar-dehydrogenase
MSTKPNNLVPGHSARLMGVALLSIVLFIAAGCGSSAPPAAIEPTAADTTAEQPAAGQPAADQPTTASDLPFLGELPATAVQATQAPAASATPAATPTAQATATAEGGVVAVAPVALEVDRSATPAPFDGITQPRYEKSECSDKYPCNDDVAGWEARIQVPAGFAATYYARVEGQPNVITFGPDGLLYVATMAGEIFTIEAGGEPQLYSDGFLAPAGLTFQPGTARLYVASRLIDLNVDGEARLAVVEDGVVTDLITGIPCCYTAMHSANGIAFGPDGFGYMAVGARADHGEILAGPNTGEQDELHPWEASILRFSPDGTTVETYARGLRNNYDIAWDADGNLFGTDNMPDFGPPEEFNLIVPGGEHGYPWYDCAVCFPAPADVDIVEPLHTFVPHASPTGITAYLDDAFPGFYNSLFVTLWSAFPEAQRVEWFSPGGEETATFATGFAAPIDLTVGPDGALYVADWATGIIFRIAYMGE
>NZ_LN890656.1|WP_095045288.1|485671_486109_-|D-tyrosyl-tRNA(Tyr)-deacylase
MRALIQRVSRGAVSVGGRVVGRIGRGFVVLVGVTHGDGRAEAEWLAAKIAGLRVFDDEAGKMNRGLADVGGEILVVSQFTLYGDARKGRRPSFTEAAVPEQAEPLVDYLVQLLRDGGFTVATGVFGAHMDVEIHNDGPVTLWLER
>NZ_LN890656.1|WP_095045289.1|486188_487256_-|glucose-1-phosphate-thymidylyltransferase
MKGLILSGGTGSRLYPLTYTNAKQLIPVANKPILFRVIESIRDAGIDDIGIVVGSTAEQIKDAVGRGNRWGVNITYIPQEKPLGLAHAVKIAQPFIGDDRFVMFLGDNVIQGGISTLISQFATSDWNSQIVLTRIEHPEQYGVAELGEDGHIVRLVEKPKVPPSDLALVGIYMFDHHIFEAADRIKPSWRGELEITDAIQWLVDHNCTVHPYIHRGWWIDTGAPGDMLSANDLVLEEIEHAIEGYVDRDSKVDHRVTIQRGAEIINSTVRGPAIIGEHARIINSYVGPYTSIDHHVVVENSEIEHSMVLENSRILDIEARIQDSLIGRDVVVARSPIRPKALKLTVGDHSKVGIL
>NZ_LN890656.1|WP_095045290.1|487452_488100_-|CpsD/CapB-family-tyrosine-protein-kinase
MALVTISDPRSPASEAYRSLRTNLSFYSLDAPLRTLVVTSPAAGEGKSSTVANLAVTMAQSGRRTVLVDCDLRRPTLHELFGLAMTPGLTSLALDETVDLPLQETSVENLWLLSSGPKPPNPADLLGAARMGRLIDQLLERADFVLFDAPPVMAAADAAILGAKVDGVLLVIQAGKTRRDHSERARELLEKANVRIIGATLTNAPQDRSMREYYG
>NZ_LN890656.1|WP_095045291.1|488192_488843_-|hypothetical-protein
MELSDYFRILRQRGWLVLLLMALTAAAAFGFSKIQTPVYESTLRLLVKPSRTDYGQAQAAKELLSGYQQWLYSSYRAQGIIDALQLDMTAGELLGNMRVASDGGSYVITLAVENTDPNLANDIARTWGDIFRQQQNEDNDRLRLEDRIFIEFIDDPQVGLERPRTMINTAAGAVFGLLLGVALIFLLEWLASGVMRRGEDVERYLGIPVIGAIPQE
>NZ_LN890656.1|WP_095045292.1|488881_489616_-|hypothetical-protein
MELRQFWNILRRRWPLVLLPALIVLGLGLATYRPAPPSYNAGVRFIVGQPPGAAAAESDEQRYYNWLASEYIVNGLTDWVRGLRFAEAVVARVEADQGVRLDPHAIQGGLAADNARSVLTISLTGGDPETVRQGLNGVIAVLTEDNAAALPQLGGQTAVLTQLDEPVVNPLPAGIRNQLDLPLRLALGLLAGAGLALLAHYLDPAVRDRAEAERAGLPILAEIPREKKNKSTDYTDFTDGKINL

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Crispr_ID: NZ_LN890656_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_5

565967-566143

Orphan

Consensus_repeat	Method
GTTGCCGGAGAGGGTGCTATTGA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_LN890656_5

>merge|NZ_LN890656|5|565967-566143|CRISPRCasFinder
GTTGCCGGAGAGGGTGCTGTTGACTACGGTCAACGTGCCATTGCTATTGGCTATACCCCCGCCATAACTCGCGCCCACGTTGCCGGTAAAGGTGCTGTTGGCGATGGTCATCGTATCATAAAAGAACAGGATGCCCCCGCCACCCGTCGCCGAGTTACCGGAGAAGACGCTGTCGGT

>NZ_LN890656|5|5|565967-566143|CRISPRCasFinder
GTTGCCGGAGAGGGTGCTGTTGA	CTACGGTCAACGTGCCATTGCTATTGGCTATACCCCCGCCATAACTCGCGCCCAC
GTTGCCGGTAAAGGTGCTGTTGG	CGATGGTCATCGTATCATAAAAGAACAGGATGCCCCCGCCACCCGTCGCCGA
GTTACCGGAGAAGACGCTGTCGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045352.1\|568414_568960_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|225200
NZ_LN890656.1\|WP_095045688.1\|573231_573666_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NZ_LN890656.1\|WP_162292535.1\|553661_555536_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_LN890656.1\|WP_095045343.1\|556277_558536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045357.1\|575827_577237_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|340419
NZ_LN890656.1\|WP_095045344.1\|558657_559044_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319910
NZ_LN890656.1\|WP_095045346.1\|560871_563124_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_LN890656.1\|WP_095045355.1\|571355_573215_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_LN890656.1\|WP_095045345.1\|559040_560603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045351.1\|567175_568207_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318
NZ_LN890656.1\|WP_095045354.1\|570598_571366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153239
NZ_LN890656.1\|WP_095045353.1\|569129_570284_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224423
NZ_LN890656.1\|WP_095045348.1\|563456_563714_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_LN890656.1\|WP_095045347.1\|563193_563454_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_LN890656.1\|WP_095045340.1\|552019_553648_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143417
NZ_LN890656.1\|WP_095045356.1\|573668_575789_-\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|200465
NZ_LN890656.1\|WP_095045358.1\|577377_578391_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_LN890656.1\|WP_095045342.1\|555845_556040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045350.1\|567013_567199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045339.1\|551234_551921_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045352.1\|568414_568960_-\|DinB-family-protein	gnl\|CDD\|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	6.32264e-17
NZ_LN890656.1\|WP_095045688.1\|573231_573666_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	1.10241e-19
NZ_LN890656.1\|WP_162292535.1\|553661_555536_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	3.90689e-41
NZ_LN890656.1\|WP_095045357.1\|575827_577237_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|340419	cd16943, HATPase_AtoS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS. This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Escherichia coli AtoS, an HK of the AtoS-AtoC TCS. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have accessory domains such as HAMP or PAS sensor domains or CBS-pair domains.	5.79444e-35
NZ_LN890656.1\|WP_095045344.1\|558657_559044_+\|VOC-family-protein	gnl\|CDD\|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	9.51213e-30
NZ_LN890656.1\|WP_095045346.1\|560871_563124_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.0889e-59
NZ_LN890656.1\|WP_095045355.1\|571355_573215_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.11739e-49
NZ_LN890656.1\|WP_095045351.1\|567175_568207_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.87281e-27
NZ_LN890656.1\|WP_095045354.1\|570598_571366_-\|hypothetical-protein	gnl\|CDD\|153239	cd03145, GAT1_cyanophycinase, Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.	9.9172e-15
NZ_LN890656.1\|WP_095045353.1\|569129_570284_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.02554e-14
NZ_LN890656.1\|WP_095045348.1\|563456_563714_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	2.73026e-16
NZ_LN890656.1\|WP_095045347.1\|563193_563454_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	3.30488e-14
NZ_LN890656.1\|WP_095045340.1\|552019_553648_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143417	cd07099, ALDH_DDALDH, Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.	1.70594e-177
NZ_LN890656.1\|WP_095045356.1\|573668_575789_-\|glycogen-debranching-protein-GlgX	gnl\|CDD\|200465	cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes. Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_LN890656.1\|WP_095045358.1\|577377_578391_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	3.43941e-05
NZ_LN890656.1\|WP_095045339.1\|551234_551921_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	7.78733e-31

>NZ_LN890656.1|WP_095045348.1|563456_563714_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MYRLQIKRSAEADLRRLPAPVFARINERLLTLRDEPRPPGVRKLQGQQEGWRIRVGEYRVIYLIDDSNRLITIVRVRHRRDVYKT
>NZ_LN890656.1|WP_095045347.1|563193_563454_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MATKIMPISDLRRNAGEVLNAVREGGEVVYITQHGRPAAVLVEYERYEAMLAQLEDLADLAAIEAAADEPSRDYADFLAGLVQSEN
>NZ_LN890656.1|WP_095045346.1|560871_563124_+|SpoIIE-family-protein-phosphatase
MLRFSDFSHLPEIDDLVRRLVAETAGLVVVAGLDSRPGGDSPGDTTDPFHFLPSGRSTIFRVLVSEALDAQPRARCLVVAADRGAINVARRFRNRIELIEVKPSFGYAEAIAAALAKRPDLLVVDRLAADNLPPLLAAARAGVRVLSQLDTLYCAQAVARHLGDLGAAADDLSGLHWVLGLQRLPTLCPTCKRPADVTADQLAQLEALGRRYPSLSAHQAPAEGGVFYAPVGCAECHFTGRRGDVAAFDFFDATDSAADLWTRPSAMPMEAYVWLLAQRGQLALSDALDFAAHQVRRSNNLLLHSERLLTERSAALERKTVELDSANRLLKQRTRELVSLEGIGQSLITWSDLRELGDRVLKSAMELSKADRGVLYYVRSSDWGQILAARGWVGAHEGVGLARGLIYEHLSDREPMVYRDNPPGLQPPADSPPLRAGQAIPLAAHGIPAGLMLIQSTRKNGFSPGEVALLQTLAGYAAIAMQRAGLIEQLQGKIEALEAAQVEIAQKERLERELELARQVQLSMIPRTFPDVGGVTFAAAYAPARQVGGDFYDVIRLDDERVALVIADVADKGMPAALYMALARSLILAEARRAAAPAEVLGNVNRLLLEVGQENMFVTVFYGVLDRGRGHLTYARAGHDHPFLLRDGGIAPLQGRGMALGLFAAPLFHVSEETMALRPGDRLVLYTDGLTDVVGPDGEMLGRERLMARLPAYAGHAPAMMCRALFDDLAAYRRDEGQFDDMAVLVVEMG
>NZ_LN890656.1|WP_095045345.1|559040_560603_+|hypothetical-protein
MTTFTPEHAARFDELQTKLAPLWRLIGRTDPGGVVQDENTLVVLSSLTGEFGAPGIVQKVYEERFLFMTFLLRQPNLRLIYLTSQPVAPLTIDYYLHNLPDVTVSHARKRLHLLSPQDGSNASLVEKVLARPWFVRLIRDHIPNPDRAHLVPFLTTDLERELALQLGIPMYAADPRHFALGGKSGARRVFAEEELRHPPGVEDISDEAGFVAAIISLRAQHPAIGRVITKHNQGVSGEGNAVVDLRGLPPPGSPSEAAAVTERLRAMRFENANLTYDAYMGAMARQGGIVEEMIDGAEKRSPSVQMRISPLGKVEILSTHDQMLGGPSGQSYLGAIFPADPAYSRLITREAAKVGARFVREGIVGRFALDFLTVKKASDAAEPADAWDAYAIEVNLRKGGTTHPFLTLQYLTDGLYDAESGEFTTELGERRYYVASDHVESHAYRIFTPDDLLDLISLHRLTFDQTCQTGLILHMFSAVGELGRLGVTCIHGTPARARRLYDDFLALLDREAAKRVASGE
>NZ_LN890656.1|WP_095045344.1|558657_559044_+|VOC-family-protein
MHHNFKPDGYNSVSVYIMADDPPAVIDFLTAAFDAQPLRQSQRSDGSLAHGELRLDDTIVMISGANPDAPAFPTWLHVYVPDVAETYRRALAAGGRSIMAPVVQAGDSDKRGAVADPAGNTWWISTQQ
>NZ_LN890656.1|WP_095045343.1|556277_558536_+|hypothetical-protein
MIQVATANRTTTSPAWWQTAARRLAPGAVFALFMAYHWRIINLAGAVPAYGDVLENIWAIDWFLDGLRAGEGLRLFAPHVFMPEGWALSTFANGLGVFALALPIAALTGAAVAFNVLQLSAFLIAYFGAYRLGRLVAGQGAAILVALLYLLWGGRWLRVGHLNLLLGSALLPWLILALERALADRPGRWRWAVAAGLVWAPAITFSLYFIWIGFFLCVAWLLGAALARRVTWRGALWRLIVAGGVAVLVCAPYFYIYWRSQSAAAGWDVRHVNVWNMSLDWLPAYFPDHRLAFLRELSARQVDGVRIEGSFSGFGLLLPLVALLGLATGRDSRWSRRATGSTGAAIVIGVILALGMTLTWNNKYIPVPALRPLNEAIWDVGRAVKPEVFPGPDAPPEFAEAIPLPGLLLAAVVPFFEDARVSARYLMIAAPALLLLVAVGLERLPRAWLKVALAALLLVEAARFPLTGARYPPPASPAFAWLAERPPGPGESVLDITAPGRGFITLGVGGEVLAATGLHGWPIAGGGGSILPAHAAYLRDWLHAHPDPADAAEFPTLLRDYGIRFVLLHMPPNPADGPQRLAAGTAELIAAGCHDNQAKLPWDRTICILEVAPAALPAVTVHLARGWSGVEPWGVWALGRESAVGWAATAGRETRFAVEAFPFCVDNQPTGQTVEFVVDDRVVGDQVVAAHRWDSCDAAQIEVVVPAELVAIGWNELTLRFGRADRPADVTGGANPDGRELSVGFTRLERIK
>NZ_LN890656.1|WP_095045342.1|555845_556040_+|hypothetical-protein
MNQRDTGIVEHDGERYIKIRGAWYNARTYIKPPEIVSRRLDERFGNALPPEKPARLKHRPPLSL
>NZ_LN890656.1|WP_162292535.1|553661_555536_-|GMC-family-oxidoreductase
MNIVLDEKRTNGHGRAAQSGRPAANGVYDYVIIGSGFGGSVSAWRLTEKGYSVLVIERGKRWNAEDFPKTNMNVFKYLWMPSLRCFGPQGLNFFRDIWLLNGSGVGGGSLIYASTHRIPPKAFFEADEWAHLADWEAELMPHYHTANRMLGTATNPCMWPADDTLLDIATDLGQSDTFEATGVGIYFGERGVTVHDPFFDGHGPTRTGCIHCGGCMVGCRHNAKNTLDKNYLYLAEKFGATVLPERNVEVIKPLYGERPDEARYEVAFEKITDVGHKRRDSVRARNVIVAAGVLGTVELLLNCRDVSRTLPLVSPMLGESVRSNSEALMGVTARDRRQDFSEGVAITSHFWADDVTSVEPCRYPPGSSFMRTLIWPLAGYGSAGQGLGGRMWESLKHFVRRPGDFLHTRLLPGWAERDTVLLIMQSVENKMSLRRGRMLSNGFRLGLQTERDPEDPIPTCVVAGSDVVNRFAQKVDGVPWVGLNDLLDIPNTAHILGGCPMGGNAAEGVVDIDQQVFNYPGLYVADGSVVPANLGVNPSLTIAAMTERAMSRIPARAALPTIAPLAYPHLITVDGRPIAQPVAEKPAAVNGAAEQKARAPLAALLMLLVGLLPVLMMLFGLKKK
>NZ_LN890656.1|WP_095045340.1|552019_553648_-|aldehyde-dehydrogenase-family-protein
MPPQNDCIDFHNPATGQKFGQVRMTTEAEVQKARREMGAAQAAWAARPVKERARLLKKLQGVMLDATDEITAVVNQDHGKSRLDALHEVFMTVEKIHHYTAQAPKWLAPERVPRGLYFFKRFLAEREPYGVVGIIGPWNYPIDLMIPPIVSALLAGNTVLVKPSEVAAATGVLLEELFNRVPELAPYVRFLHGDARVGQALVRAKPDLLFLTGSVKTGQIVAKMAVEDMIPFMYELGGKDAMLVLEDADIPAAAKWGVWGAFYSTGQACVSVERVYVHEKVYDKFLAAVLDETAKFSVGYSAEVDNPNWMGPLTFQRQCDIVNSHLSDALDKGARVVLGGKQTGMFIEPTVLVDVDHSMKIMTDETFGPIMPIMKVHDDTQAIQLANHSDMGLSAYVWSNDLKHAERVGRQLHVGVVNINDTMSHYSVAQLPFGGTKLSGNTRTHGRGEVTQFTRMKAYSISRPPSAIDPVIWIRRPGTYRLLKAMMGATYGLTWRQRVEPLGELLEQHQEVRAVATRTAAGVGALSAVAALAVMLLRVRRS
>NZ_LN890656.1|WP_095045339.1|551234_551921_-|Uma2-family-endonuclease
MATMTIAPAVVRAEPEVVRRPASYEEYLALAGETRIAEWVDGEYIEYMPPSSEHQSSVVFLIRLISTFVDELDIGQAGVAPWEVKLWPGGPSREPDVFVVLKDRLSGFDKMRFNGAPDMVLEIVSPGSVREDRVRKFTEYEQAGVGEYWLIDPRPNQRTVECFVRDAAGIFQPVEADADGRLYSSVLTYEGARFWLHVSWLWQEPQPKTSRLLRQIFDSDERFASREE
>NZ_LN890656.1|WP_095045350.1|567013_567199_+|hypothetical-protein
MKRWLSTKESTLEDLADLAAIEATADEPVRDYDDFLAELLLSKSRNRVFRYATRLARLFRF
>NZ_LN890656.1|WP_095045351.1|567175_568207_-|endonuclease/exonuclease/phosphatase-family-protein
MAGMIKLANNHRFRGAIHAAGLLYLIGMAALLIANHFLRPVSPFVALASTFNLYLYLAALPLVGCLILLRTRAAIAILLLLVALFLVTHPVLPPVSAILPEKSRGPTVSAMTFNLGLSLTSPDQLAQTIAAAQADIVAVQEMTDQSAAVLAAELAAYPYQISDTAIASTGFFSKLPILGYQWLYPPDGRPFLHVVVDQKGTDWHIFPIHFYPPGIVWSETRPLPRGIIETDLESEVAYMLQQVAGVAEPVVVLGDFNMSDQSHAYAAITASLQDSFRQAGFGLGRTFPNNFRLAGVRLPFPLVRIDYVFHSPHLATTAATVNCVEGQSDHCAVLVVLKAKEPR
>NZ_LN890656.1|WP_095045352.1|568414_568960_-|DinB-family-protein
MDTQAHLPLNQAAADPPLVMLFRHNLWANLRLLDACAALDEEQLAATIPGTYNTIHKTLNHIVWSEEQYLSDLTGREPESRLWSAGGPVLVDVARLRAMAQQNGQGLMDVAAGAAAGEVVILEGDGLRWHTPVGLILTQAINHATEHRAQIMVILTQLGLEPPDVSGWAFSQEFVRPISIE
>NZ_LN890656.1|WP_095045353.1|569129_570284_-|alpha/beta-fold-hydrolase
MIRIVKRLLILLLLFVSLGCGRSPNANTAAVSSPTPVPSLATTTSQPTPLPAGSSVSIAAATATIPATAALPTVPPPTPPPPTAAPTPTPDPYADLTIAALAARSYGGGLLEITDTLESNDRFTRYEIKYPSDGLTIYGFMNVPNEGDNFPVALLLHGYIDPDEYETVAYTRRYADALAEAGYFVIHPNFRNYPPSDSGPDPYRIGYAIDVLNLIAIVREQSQDTLGTLRRANADDINLWGHSMGGGVALRVITVINEPYLKSAVLYGSMSGDEARNYGRIRSWAGSQRARFELAAPPEMLAAISPIHHLARVEAAVAVHHSYADDVVPVEWSEEVCGVLDGLFAAREIPHAPECFFYDLQPHTFRGDGDGLFMERTIDFFNRH
>NZ_LN890656.1|WP_095045354.1|570598_571366_-|hypothetical-protein
MTNEYPLVLLHGGGDAPTARESTFGRMAQAFLGGGDGPLLIVAAAAEPEEARETTDYYSELFLALAVPAERLQPIWVRPERPLTGAQVAGYAPAGLFVCGGATPVYHAALCADLSWVEYVRGQRVAYGGTSAGAAIAATRAIVGGWQTGDGAARPMIFAGAGEGLDALTVRPGAGLVPFAVDVHAGQMGTLTRLIQAVAGGLTDEGWAIDEDTLLVAQGSRLEVAGRGHAYRVERLGVGEVRLEILAAPMEYHRG
>NZ_LN890656.1|WP_095045355.1|571355_573215_-|SpoIIE-family-protein-phosphatase
MPLANSHFLVIDDDAQRRERVTRPFGGWDWAATYLPGEPAGALAALARGGFDLVLLNLDAAERDEYAFLRDHAHNTTLNAIPVVVTAWPGVPMERLVRCVQAGAADYIIHPEEEVLLRARLTNVLQRKLLQEQAGMALEAFNEIEKIADDLRLVILPLGAALSAEAAFDRLIARIVAEAQAIANADTGALFLARDDGLLHHTYLRVQSLDFTYQAGSGAPELIPAMPLTDAAGEPNVGSLPVYVALKGESLNLSRDGIGRLKSGVLAQLESTLAYEPESILAVPLRNGQVVGALLLANRRQPGSEQVVPFDAYHQQVAESLASQAAVVLNNRLLSEAQAQLMRYKRELEIGREIQLSFLPARLPNPDGWELVARFQPALEVAGDFYDAFRLPHGYVVLIIADVVGKGVTAALFMAIIRSLFRALFQQNYYEAEPAPAAPGFGRTAPFPFIDRDALVNAVRLTNAYLIGNHGDTYTFATLFAAVIDPHDGHLWYVNAGHNPPQIFGPVENGERAARVELSPTGPAIGLLTNVPYQLGQATLAPGELLLAYTDGVTEARNPAAEELGLERVEDIMRHAATAEEALAAIEEALRVHTTGAEPFDDMTMVALRRLETGTPDDE
>NZ_LN890656.1|WP_095045688.1|573231_573666_-|ATP-binding-protein
MEPLTVGGHADNLSQVLDYVVWAAAAFGLDDAATYRLALAVDEIATNVVQHGYEDYHLSGDLTIWAETTERQLILCLEDTGRPFDPRQAPRPADLDRPLEERRDGGLGIFLALWGVDGFAYDSEGGRNRSTFMMESAPAMPDDE
>NZ_LN890656.1|WP_095045356.1|573668_575789_-|glycogen-debranching-protein-GlgX
MFNRIDVYPTHRHGDLWLRAGRPQPFGATIVPGGINFAVFSRHGVDCTLVLFHKGEAQPFIEIPFPDAFRIGNVWAMVVFGLDHEKIEYGYRMDGPHRPHAGHRFNRHDILLDPYARAIGGRPRWAAALDKADPMPFRGRVLIDDFDWQNDRQLELPAEDLIIYEMHVRGFTRDQSSGVKFPGTYAAIREKIPYLLELGINAVELMPIQEFDEHESDFFNPYNGQKLINFWGYSTIGFFAPKASYAATGHLGMEADELKALVKLLHRHGIEVILDVVFNHTAEGNEKGPTISYRGLDNKTYYMLRPDGSYQNFSGTGNTLNCNNPVVRNLVLDALRYWVSEYHIDGFRFDLASILGRDAEGHPLANPPLLESLAHDPVLGHTKLIAEAWDAGGLYQVGSFPAYGRWAEWNGRYRDVLRRFLKGDAEQVGEMAQMVKGSPHMYLERGPTASVNFITCHDGFTLHDMVSYAEKHNTANGEDNRDGANDNNSWNWGHEGATDDVGINVLRERLMRNAIAMLMVCQGVPMILMGDEMAHTKYGNNNTYAQDNELNWLDWRRLASHAGLFDFFRRCVAFRKAHPALRRRYHLHERDMIDSGFRDITWHGVKEGRPDWSPNSRTLAFMLCGLHAVLMPGRTADDHIYVAMNMHWEPHTFELPRLRDGRRWHLFADTYRPAPADSCDPGNERPLRTQRNLPVGPRSVVILVGK
>NZ_LN890656.1|WP_095045357.1|575827_577237_-|cyclic-nucleotide-binding-domain-containing-protein
MANYEFLRKIPLFAELPDDDLQSLCQIVRELHLPAGEVLFEEGSSGDMAYIIRGGEVEIVKVSQNREILLAKRGPGEVFGEIALVFDTPRTATARARTDTDLMGIGRADLRKLLQISPSAAASMFDIVLSRLQNTQVLLRQSEKMAQLGTFTAGIAHELNNPAAAVQRSADHLNTALFDSARTFMRMVREGLTAEQQETLEVYVKLTQERAKGMPALDALARSDREAELEEWLEDHGVVSAWECATTLVNLDFTNDQLDELAATYGEAQLPTILDWLNNNYTIFNLLTELQQGALRITSIVKALKSYTYLDQAPIVRANIHQGLDDTLLILRHKLKTTIKVRRDYAPDLPEIDAHGSDLNQVWTNLIDNAADALHMAATPDPTITLRTRQEGKWIVVTIEDNGPGIPADALPRIFEAFYTTKPIGQGTGLGLDISYNIVARKHKGDIRVDSEPGRTRFEVWLPKVMEEE
>NZ_LN890656.1|WP_095045358.1|577377_578391_-|GNAT-family-N-acetyltransferase
MSETIVAFHEGLLPAAAELLARRHRRDRAAMPLLPARFAEARPALVAAREVWHKPLTSGVAALRDGRLIGYLLGEVKIDSLRGRHVWVHLAGHALAEDAPPDLYAALYAAAGPEWLAEGAFDHYVMMPAADAAGLDVWYGLNFGREQAHAARASAGPLPDPVDISGVTIRRATEADRDAMVDEMSPILRQHLVAPPVWAAALPETMRPMREGFVEMLSDDSARVWLAVADGPEGGRVLGYQAYFPATPTDDNLMVSISDRTVLLEVAATRADARGRGIGRALTRVGLADAAAAGYGLCITDWRTANVEAARFWPRMGFRPVAYRLTRKVDPRVAWAI

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Crispr_ID: NZ_LN890656_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_6

566273-566373

Orphan

Consensus_repeat	Method
GTTGCCGGAGAGGGTGCTATTGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_6

>merge|NZ_LN890656|6|566273-566373|CRISPRCasFinder
GTTGCCGGTGATAGTGCTGTTGGTGACGGTCAGCGTGCCGCCATCGTTGAAGATGCCGCCGGCATCATAGCCGGCCGCGTTTCCGGAGATGGTGCTGTTGT

>NZ_LN890656|6|6|566273-566373|CRISPRCasFinder
GTTGCCGGTGATAGTGCTGTTGG	TGACGGTCAGCGTGCCGCCATCGTTGAAGATGCCGCCGGCATCATAGCCGGCCGC
GTTTCCGGAGATGGTGCTGTTGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045352.1\|568414_568960_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|225200
NZ_LN890656.1\|WP_095045688.1\|573231_573666_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|379279
NZ_LN890656.1\|WP_162292535.1\|553661_555536_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_LN890656.1\|WP_095045343.1\|556277_558536_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045357.1\|575827_577237_-\|cyclic-nucleotide-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|340419
NZ_LN890656.1\|WP_095045344.1\|558657_559044_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319910
NZ_LN890656.1\|WP_095045346.1\|560871_563124_+\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_LN890656.1\|WP_095045355.1\|571355_573215_-\|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl\|CDD\|225118
NZ_LN890656.1\|WP_095045345.1\|559040_560603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045351.1\|567175_568207_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|197318
NZ_LN890656.1\|WP_095045354.1\|570598_571366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|153239
NZ_LN890656.1\|WP_095045353.1\|569129_570284_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224423
NZ_LN890656.1\|WP_095045348.1\|563456_563714_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_LN890656.1\|WP_095045347.1\|563193_563454_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852
NZ_LN890656.1\|WP_095045340.1\|552019_553648_-\|aldehyde-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|143417
NZ_LN890656.1\|WP_095045356.1\|573668_575789_-\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|200465
NZ_LN890656.1\|WP_095045358.1\|577377_578391_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|223532
NZ_LN890656.1\|WP_095045342.1\|555845_556040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045350.1\|567013_567199_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045339.1\|551234_551921_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045352.1\|568414_568960_-\|DinB-family-protein	gnl\|CDD\|225200	COG2318, DinB, Uncharacterized protein conserved in bacteria [Function unknown].	6.32264e-17
NZ_LN890656.1\|WP_095045688.1\|573231_573666_-\|ATP-binding-protein	gnl\|CDD\|379279	pfam13581, HATPase_c_2, Histidine kinase-like ATPase domain.	1.10241e-19
NZ_LN890656.1\|WP_162292535.1\|553661_555536_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	3.90689e-41
NZ_LN890656.1\|WP_095045357.1\|575827_577237_-\|cyclic-nucleotide-binding-domain-containing-protein	gnl\|CDD\|340419	cd16943, HATPase_AtoS-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Escherichia coli K-12 AtoS. This family includes the histidine kinase-like ATPase (HATPase) domains of various histidine kinases (HKs) of two-component signal transduction systems (TCSs) such as Escherichia coli AtoS, an HK of the AtoS-AtoC TCS. Proteins having this HATPase domain also contain a histidine kinase dimerization and phosphoacceptor domain (HisKA); some have accessory domains such as HAMP or PAS sensor domains or CBS-pair domains.	5.79444e-35
NZ_LN890656.1\|WP_095045344.1\|558657_559044_+\|VOC-family-protein	gnl\|CDD\|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	9.51213e-30
NZ_LN890656.1\|WP_095045346.1\|560871_563124_+\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	1.0889e-59
NZ_LN890656.1\|WP_095045355.1\|571355_573215_-\|SpoIIE-family-protein-phosphatase	gnl\|CDD\|225118	COG2208, RsbU, Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription].	3.11739e-49
NZ_LN890656.1\|WP_095045351.1\|567175_568207_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|197318	cd09084, EEP-2, Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily; uncharacterized family 2. This family of uncharacterized proteins belongs to a superfamily that includes the catalytic domain (exonuclease/endonuclease/phosphatase, EEP, domain) of a diverse set of proteins including the ExoIII family of apurinic/apyrimidinic (AP) endonucleases, inositol polyphosphate 5-phosphatases (INPP5), neutral sphingomyelinases (nSMases), deadenylases (such as the vertebrate circadian-clock regulated nocturnin), bacterial cytolethal distending toxin B (CdtB), deoxyribonuclease 1 (DNase1), the endonuclease domain of the non-LTR retrotransposon LINE-1, and related domains. These diverse enzymes share a common catalytic mechanism of cleaving phosphodiester bonds; their substrates range from nucleic acids to phospholipids and perhaps, proteins.	1.87281e-27
NZ_LN890656.1\|WP_095045354.1\|570598_571366_-\|hypothetical-protein	gnl\|CDD\|153239	cd03145, GAT1_cyanophycinase, Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. Type 1 glutamine amidotransferase (GATase1)-like domain found in cyanophycinase. This group contains proteins similar to the extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Cyanophycinase is believed to be a serine-type exopeptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow.	9.9172e-15
NZ_LN890656.1\|WP_095045353.1\|569129_570284_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	3.02554e-14
NZ_LN890656.1\|WP_095045348.1\|563456_563714_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	2.73026e-16
NZ_LN890656.1\|WP_095045347.1\|563193_563454_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	3.30488e-14
NZ_LN890656.1\|WP_095045340.1\|552019_553648_-\|aldehyde-dehydrogenase-family-protein	gnl\|CDD\|143417	cd07099, ALDH_DDALDH, Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.	1.70594e-177
NZ_LN890656.1\|WP_095045356.1\|573668_575789_-\|glycogen-debranching-protein-GlgX	gnl\|CDD\|200465	cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes. Debranching enzymes facilitate the breakdown of glycogen through glucosyltransferase and glucosidase activity. These activities are performed by a single enzyme in mammals, yeast, and some bacteria, but by two distinct enzymes in Escherichia coli and other bacteria. Debranching enzymes perform two activities: 4-alpha-D-glucanotransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). 4-alpha-D-glucanotransferase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. Amylo-alpha-1,6-glucosidase catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. In Escherichia coli, GlgX is the debranching enzyme and malQ is the 4-alpha-glucanotransferase. TreX, an archaeal glycogen-debranching enzyme has dual activities like mammals and yeast, but is structurally similar to GlgX. TreX exists in two oligomeric states, a dimer and tetramer. Isoamylase (EC 3.2.1.68) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen and their beta-limit dextrins. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_LN890656.1\|WP_095045358.1\|577377_578391_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|223532	COG0456, RimI, Acetyltransferases [General function prediction only].	3.43941e-05
NZ_LN890656.1\|WP_095045339.1\|551234_551921_-\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	7.78733e-31

>NZ_LN890656.1|WP_095045348.1|563456_563714_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MYRLQIKRSAEADLRRLPAPVFARINERLLTLRDEPRPPGVRKLQGQQEGWRIRVGEYRVIYLIDDSNRLITIVRVRHRRDVYKT
>NZ_LN890656.1|WP_095045347.1|563193_563454_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MATKIMPISDLRRNAGEVLNAVREGGEVVYITQHGRPAAVLVEYERYEAMLAQLEDLADLAAIEAAADEPSRDYADFLAGLVQSEN
>NZ_LN890656.1|WP_095045346.1|560871_563124_+|SpoIIE-family-protein-phosphatase
MLRFSDFSHLPEIDDLVRRLVAETAGLVVVAGLDSRPGGDSPGDTTDPFHFLPSGRSTIFRVLVSEALDAQPRARCLVVAADRGAINVARRFRNRIELIEVKPSFGYAEAIAAALAKRPDLLVVDRLAADNLPPLLAAARAGVRVLSQLDTLYCAQAVARHLGDLGAAADDLSGLHWVLGLQRLPTLCPTCKRPADVTADQLAQLEALGRRYPSLSAHQAPAEGGVFYAPVGCAECHFTGRRGDVAAFDFFDATDSAADLWTRPSAMPMEAYVWLLAQRGQLALSDALDFAAHQVRRSNNLLLHSERLLTERSAALERKTVELDSANRLLKQRTRELVSLEGIGQSLITWSDLRELGDRVLKSAMELSKADRGVLYYVRSSDWGQILAARGWVGAHEGVGLARGLIYEHLSDREPMVYRDNPPGLQPPADSPPLRAGQAIPLAAHGIPAGLMLIQSTRKNGFSPGEVALLQTLAGYAAIAMQRAGLIEQLQGKIEALEAAQVEIAQKERLERELELARQVQLSMIPRTFPDVGGVTFAAAYAPARQVGGDFYDVIRLDDERVALVIADVADKGMPAALYMALARSLILAEARRAAAPAEVLGNVNRLLLEVGQENMFVTVFYGVLDRGRGHLTYARAGHDHPFLLRDGGIAPLQGRGMALGLFAAPLFHVSEETMALRPGDRLVLYTDGLTDVVGPDGEMLGRERLMARLPAYAGHAPAMMCRALFDDLAAYRRDEGQFDDMAVLVVEMG
>NZ_LN890656.1|WP_095045345.1|559040_560603_+|hypothetical-protein
MTTFTPEHAARFDELQTKLAPLWRLIGRTDPGGVVQDENTLVVLSSLTGEFGAPGIVQKVYEERFLFMTFLLRQPNLRLIYLTSQPVAPLTIDYYLHNLPDVTVSHARKRLHLLSPQDGSNASLVEKVLARPWFVRLIRDHIPNPDRAHLVPFLTTDLERELALQLGIPMYAADPRHFALGGKSGARRVFAEEELRHPPGVEDISDEAGFVAAIISLRAQHPAIGRVITKHNQGVSGEGNAVVDLRGLPPPGSPSEAAAVTERLRAMRFENANLTYDAYMGAMARQGGIVEEMIDGAEKRSPSVQMRISPLGKVEILSTHDQMLGGPSGQSYLGAIFPADPAYSRLITREAAKVGARFVREGIVGRFALDFLTVKKASDAAEPADAWDAYAIEVNLRKGGTTHPFLTLQYLTDGLYDAESGEFTTELGERRYYVASDHVESHAYRIFTPDDLLDLISLHRLTFDQTCQTGLILHMFSAVGELGRLGVTCIHGTPARARRLYDDFLALLDREAAKRVASGE
>NZ_LN890656.1|WP_095045344.1|558657_559044_+|VOC-family-protein
MHHNFKPDGYNSVSVYIMADDPPAVIDFLTAAFDAQPLRQSQRSDGSLAHGELRLDDTIVMISGANPDAPAFPTWLHVYVPDVAETYRRALAAGGRSIMAPVVQAGDSDKRGAVADPAGNTWWISTQQ
>NZ_LN890656.1|WP_095045343.1|556277_558536_+|hypothetical-protein
MIQVATANRTTTSPAWWQTAARRLAPGAVFALFMAYHWRIINLAGAVPAYGDVLENIWAIDWFLDGLRAGEGLRLFAPHVFMPEGWALSTFANGLGVFALALPIAALTGAAVAFNVLQLSAFLIAYFGAYRLGRLVAGQGAAILVALLYLLWGGRWLRVGHLNLLLGSALLPWLILALERALADRPGRWRWAVAAGLVWAPAITFSLYFIWIGFFLCVAWLLGAALARRVTWRGALWRLIVAGGVAVLVCAPYFYIYWRSQSAAAGWDVRHVNVWNMSLDWLPAYFPDHRLAFLRELSARQVDGVRIEGSFSGFGLLLPLVALLGLATGRDSRWSRRATGSTGAAIVIGVILALGMTLTWNNKYIPVPALRPLNEAIWDVGRAVKPEVFPGPDAPPEFAEAIPLPGLLLAAVVPFFEDARVSARYLMIAAPALLLLVAVGLERLPRAWLKVALAALLLVEAARFPLTGARYPPPASPAFAWLAERPPGPGESVLDITAPGRGFITLGVGGEVLAATGLHGWPIAGGGGSILPAHAAYLRDWLHAHPDPADAAEFPTLLRDYGIRFVLLHMPPNPADGPQRLAAGTAELIAAGCHDNQAKLPWDRTICILEVAPAALPAVTVHLARGWSGVEPWGVWALGRESAVGWAATAGRETRFAVEAFPFCVDNQPTGQTVEFVVDDRVVGDQVVAAHRWDSCDAAQIEVVVPAELVAIGWNELTLRFGRADRPADVTGGANPDGRELSVGFTRLERIK
>NZ_LN890656.1|WP_095045342.1|555845_556040_+|hypothetical-protein
MNQRDTGIVEHDGERYIKIRGAWYNARTYIKPPEIVSRRLDERFGNALPPEKPARLKHRPPLSL
>NZ_LN890656.1|WP_162292535.1|553661_555536_-|GMC-family-oxidoreductase
MNIVLDEKRTNGHGRAAQSGRPAANGVYDYVIIGSGFGGSVSAWRLTEKGYSVLVIERGKRWNAEDFPKTNMNVFKYLWMPSLRCFGPQGLNFFRDIWLLNGSGVGGGSLIYASTHRIPPKAFFEADEWAHLADWEAELMPHYHTANRMLGTATNPCMWPADDTLLDIATDLGQSDTFEATGVGIYFGERGVTVHDPFFDGHGPTRTGCIHCGGCMVGCRHNAKNTLDKNYLYLAEKFGATVLPERNVEVIKPLYGERPDEARYEVAFEKITDVGHKRRDSVRARNVIVAAGVLGTVELLLNCRDVSRTLPLVSPMLGESVRSNSEALMGVTARDRRQDFSEGVAITSHFWADDVTSVEPCRYPPGSSFMRTLIWPLAGYGSAGQGLGGRMWESLKHFVRRPGDFLHTRLLPGWAERDTVLLIMQSVENKMSLRRGRMLSNGFRLGLQTERDPEDPIPTCVVAGSDVVNRFAQKVDGVPWVGLNDLLDIPNTAHILGGCPMGGNAAEGVVDIDQQVFNYPGLYVADGSVVPANLGVNPSLTIAAMTERAMSRIPARAALPTIAPLAYPHLITVDGRPIAQPVAEKPAAVNGAAEQKARAPLAALLMLLVGLLPVLMMLFGLKKK
>NZ_LN890656.1|WP_095045340.1|552019_553648_-|aldehyde-dehydrogenase-family-protein
MPPQNDCIDFHNPATGQKFGQVRMTTEAEVQKARREMGAAQAAWAARPVKERARLLKKLQGVMLDATDEITAVVNQDHGKSRLDALHEVFMTVEKIHHYTAQAPKWLAPERVPRGLYFFKRFLAEREPYGVVGIIGPWNYPIDLMIPPIVSALLAGNTVLVKPSEVAAATGVLLEELFNRVPELAPYVRFLHGDARVGQALVRAKPDLLFLTGSVKTGQIVAKMAVEDMIPFMYELGGKDAMLVLEDADIPAAAKWGVWGAFYSTGQACVSVERVYVHEKVYDKFLAAVLDETAKFSVGYSAEVDNPNWMGPLTFQRQCDIVNSHLSDALDKGARVVLGGKQTGMFIEPTVLVDVDHSMKIMTDETFGPIMPIMKVHDDTQAIQLANHSDMGLSAYVWSNDLKHAERVGRQLHVGVVNINDTMSHYSVAQLPFGGTKLSGNTRTHGRGEVTQFTRMKAYSISRPPSAIDPVIWIRRPGTYRLLKAMMGATYGLTWRQRVEPLGELLEQHQEVRAVATRTAAGVGALSAVAALAVMLLRVRRS
>NZ_LN890656.1|WP_095045339.1|551234_551921_-|Uma2-family-endonuclease
MATMTIAPAVVRAEPEVVRRPASYEEYLALAGETRIAEWVDGEYIEYMPPSSEHQSSVVFLIRLISTFVDELDIGQAGVAPWEVKLWPGGPSREPDVFVVLKDRLSGFDKMRFNGAPDMVLEIVSPGSVREDRVRKFTEYEQAGVGEYWLIDPRPNQRTVECFVRDAAGIFQPVEADADGRLYSSVLTYEGARFWLHVSWLWQEPQPKTSRLLRQIFDSDERFASREE
>NZ_LN890656.1|WP_095045350.1|567013_567199_+|hypothetical-protein
MKRWLSTKESTLEDLADLAAIEATADEPVRDYDDFLAELLLSKSRNRVFRYATRLARLFRF
>NZ_LN890656.1|WP_095045351.1|567175_568207_-|endonuclease/exonuclease/phosphatase-family-protein
MAGMIKLANNHRFRGAIHAAGLLYLIGMAALLIANHFLRPVSPFVALASTFNLYLYLAALPLVGCLILLRTRAAIAILLLLVALFLVTHPVLPPVSAILPEKSRGPTVSAMTFNLGLSLTSPDQLAQTIAAAQADIVAVQEMTDQSAAVLAAELAAYPYQISDTAIASTGFFSKLPILGYQWLYPPDGRPFLHVVVDQKGTDWHIFPIHFYPPGIVWSETRPLPRGIIETDLESEVAYMLQQVAGVAEPVVVLGDFNMSDQSHAYAAITASLQDSFRQAGFGLGRTFPNNFRLAGVRLPFPLVRIDYVFHSPHLATTAATVNCVEGQSDHCAVLVVLKAKEPR
>NZ_LN890656.1|WP_095045352.1|568414_568960_-|DinB-family-protein
MDTQAHLPLNQAAADPPLVMLFRHNLWANLRLLDACAALDEEQLAATIPGTYNTIHKTLNHIVWSEEQYLSDLTGREPESRLWSAGGPVLVDVARLRAMAQQNGQGLMDVAAGAAAGEVVILEGDGLRWHTPVGLILTQAINHATEHRAQIMVILTQLGLEPPDVSGWAFSQEFVRPISIE
>NZ_LN890656.1|WP_095045353.1|569129_570284_-|alpha/beta-fold-hydrolase
MIRIVKRLLILLLLFVSLGCGRSPNANTAAVSSPTPVPSLATTTSQPTPLPAGSSVSIAAATATIPATAALPTVPPPTPPPPTAAPTPTPDPYADLTIAALAARSYGGGLLEITDTLESNDRFTRYEIKYPSDGLTIYGFMNVPNEGDNFPVALLLHGYIDPDEYETVAYTRRYADALAEAGYFVIHPNFRNYPPSDSGPDPYRIGYAIDVLNLIAIVREQSQDTLGTLRRANADDINLWGHSMGGGVALRVITVINEPYLKSAVLYGSMSGDEARNYGRIRSWAGSQRARFELAAPPEMLAAISPIHHLARVEAAVAVHHSYADDVVPVEWSEEVCGVLDGLFAAREIPHAPECFFYDLQPHTFRGDGDGLFMERTIDFFNRH
>NZ_LN890656.1|WP_095045354.1|570598_571366_-|hypothetical-protein
MTNEYPLVLLHGGGDAPTARESTFGRMAQAFLGGGDGPLLIVAAAAEPEEARETTDYYSELFLALAVPAERLQPIWVRPERPLTGAQVAGYAPAGLFVCGGATPVYHAALCADLSWVEYVRGQRVAYGGTSAGAAIAATRAIVGGWQTGDGAARPMIFAGAGEGLDALTVRPGAGLVPFAVDVHAGQMGTLTRLIQAVAGGLTDEGWAIDEDTLLVAQGSRLEVAGRGHAYRVERLGVGEVRLEILAAPMEYHRG
>NZ_LN890656.1|WP_095045355.1|571355_573215_-|SpoIIE-family-protein-phosphatase
MPLANSHFLVIDDDAQRRERVTRPFGGWDWAATYLPGEPAGALAALARGGFDLVLLNLDAAERDEYAFLRDHAHNTTLNAIPVVVTAWPGVPMERLVRCVQAGAADYIIHPEEEVLLRARLTNVLQRKLLQEQAGMALEAFNEIEKIADDLRLVILPLGAALSAEAAFDRLIARIVAEAQAIANADTGALFLARDDGLLHHTYLRVQSLDFTYQAGSGAPELIPAMPLTDAAGEPNVGSLPVYVALKGESLNLSRDGIGRLKSGVLAQLESTLAYEPESILAVPLRNGQVVGALLLANRRQPGSEQVVPFDAYHQQVAESLASQAAVVLNNRLLSEAQAQLMRYKRELEIGREIQLSFLPARLPNPDGWELVARFQPALEVAGDFYDAFRLPHGYVVLIIADVVGKGVTAALFMAIIRSLFRALFQQNYYEAEPAPAAPGFGRTAPFPFIDRDALVNAVRLTNAYLIGNHGDTYTFATLFAAVIDPHDGHLWYVNAGHNPPQIFGPVENGERAARVELSPTGPAIGLLTNVPYQLGQATLAPGELLLAYTDGVTEARNPAAEELGLERVEDIMRHAATAEEALAAIEEALRVHTTGAEPFDDMTMVALRRLETGTPDDE
>NZ_LN890656.1|WP_095045688.1|573231_573666_-|ATP-binding-protein
MEPLTVGGHADNLSQVLDYVVWAAAAFGLDDAATYRLALAVDEIATNVVQHGYEDYHLSGDLTIWAETTERQLILCLEDTGRPFDPRQAPRPADLDRPLEERRDGGLGIFLALWGVDGFAYDSEGGRNRSTFMMESAPAMPDDE
>NZ_LN890656.1|WP_095045356.1|573668_575789_-|glycogen-debranching-protein-GlgX
MFNRIDVYPTHRHGDLWLRAGRPQPFGATIVPGGINFAVFSRHGVDCTLVLFHKGEAQPFIEIPFPDAFRIGNVWAMVVFGLDHEKIEYGYRMDGPHRPHAGHRFNRHDILLDPYARAIGGRPRWAAALDKADPMPFRGRVLIDDFDWQNDRQLELPAEDLIIYEMHVRGFTRDQSSGVKFPGTYAAIREKIPYLLELGINAVELMPIQEFDEHESDFFNPYNGQKLINFWGYSTIGFFAPKASYAATGHLGMEADELKALVKLLHRHGIEVILDVVFNHTAEGNEKGPTISYRGLDNKTYYMLRPDGSYQNFSGTGNTLNCNNPVVRNLVLDALRYWVSEYHIDGFRFDLASILGRDAEGHPLANPPLLESLAHDPVLGHTKLIAEAWDAGGLYQVGSFPAYGRWAEWNGRYRDVLRRFLKGDAEQVGEMAQMVKGSPHMYLERGPTASVNFITCHDGFTLHDMVSYAEKHNTANGEDNRDGANDNNSWNWGHEGATDDVGINVLRERLMRNAIAMLMVCQGVPMILMGDEMAHTKYGNNNTYAQDNELNWLDWRRLASHAGLFDFFRRCVAFRKAHPALRRRYHLHERDMIDSGFRDITWHGVKEGRPDWSPNSRTLAFMLCGLHAVLMPGRTADDHIYVAMNMHWEPHTFELPRLRDGRRWHLFADTYRPAPADSCDPGNERPLRTQRNLPVGPRSVVILVGK
>NZ_LN890656.1|WP_095045357.1|575827_577237_-|cyclic-nucleotide-binding-domain-containing-protein
MANYEFLRKIPLFAELPDDDLQSLCQIVRELHLPAGEVLFEEGSSGDMAYIIRGGEVEIVKVSQNREILLAKRGPGEVFGEIALVFDTPRTATARARTDTDLMGIGRADLRKLLQISPSAAASMFDIVLSRLQNTQVLLRQSEKMAQLGTFTAGIAHELNNPAAAVQRSADHLNTALFDSARTFMRMVREGLTAEQQETLEVYVKLTQERAKGMPALDALARSDREAELEEWLEDHGVVSAWECATTLVNLDFTNDQLDELAATYGEAQLPTILDWLNNNYTIFNLLTELQQGALRITSIVKALKSYTYLDQAPIVRANIHQGLDDTLLILRHKLKTTIKVRRDYAPDLPEIDAHGSDLNQVWTNLIDNAADALHMAATPDPTITLRTRQEGKWIVVTIEDNGPGIPADALPRIFEAFYTTKPIGQGTGLGLDISYNIVARKHKGDIRVDSEPGRTRFEVWLPKVMEEE
>NZ_LN890656.1|WP_095045358.1|577377_578391_-|GNAT-family-N-acetyltransferase
MSETIVAFHEGLLPAAAELLARRHRRDRAAMPLLPARFAEARPALVAAREVWHKPLTSGVAALRDGRLIGYLLGEVKIDSLRGRHVWVHLAGHALAEDAPPDLYAALYAAAGPEWLAEGAFDHYVMMPAADAAGLDVWYGLNFGREQAHAARASAGPLPDPVDISGVTIRRATEADRDAMVDEMSPILRQHLVAPPVWAAALPETMRPMREGFVEMLSDDSARVWLAVADGPEGGRVLGYQAYFPATPTDDNLMVSISDRTVLLEVAATRADARGRGIGRALTRVGLADAAAAGYGLCITDWRTANVEAARFWPRMGFRPVAYRLTRKVDPRVAWAI

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Crispr_ID: NZ_LN890656_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_7

624008-624160

Orphan

Consensus_repeat	Method
CAATCCGTTTTCATCCGTCCCATCCGTGTTAATCCGTGGCTAAATGATTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_7

>merge|NZ_LN890656|7|624008-624160|CRISPRCasFinder
CAATCCGTTTTCATCCGTCCCATCCGTGTTAATCCGTGGCTAAATGATTAATCTTATTACGAATGATACGGATGAAACGGATGAAAACGAATTGAACTTACGCAATCCGTTTTCATCCGTCCCATCCGTGTTAATCCGTGGCTAAATGATTAA

>NZ_LN890656|7|7|624008-624160|CRISPRCasFinder
CAATCCGTTTTCATCCGTCCCATCCGTGTTAATCCGTGGCTAAATGATTAA	TCTTATTACGAATGATACGGATGAAACGGATGAAAACGAATTGAACTTACG
CAATCCGTTTTCATCCGTCCCATCCGTGTTAATCCGTGGCTAAATGATTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_157913353.1\|615050_616454_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340890
NZ_LN890656.1\|WP_095045399.1\|623491_623911_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045406.1\|634721_635690_+\|phosphoribulokinase	unknown	unknown	gnl\|CDD\|180975
NZ_LN890656.1\|WP_095045396.1\|621612_621993_-\|DUF4260-domain-containing-protein	unknown	unknown	gnl\|CDD\|379455
NZ_LN890656.1\|WP_095045398.1\|622297_623197_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274737
NZ_LN890656.1\|WP_095045402.1\|628771_629527_-\|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl\|CDD\|224527
NZ_LN890656.1\|WP_095045405.1\|633137_634544_+\|form-I-ribulose-bisphosphate-carboxylase-large-subunit	unknown	unknown	gnl\|CDD\|179787
NZ_LN890656.1\|WP_095045404.1\|630448_632875_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NZ_LN890656.1\|WP_095045394.1\|617905_619786_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LN890656.1\|WP_095045395.1\|619782_621573_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LN890656.1\|WP_095045392.1\|617339_617606_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|224937
NZ_LN890656.1\|WP_095045400.1\|624168_626586_-\|META-domain-containing-protein	unknown	unknown	gnl\|CDD\|377111
NZ_LN890656.1\|WP_095045401.1\|626768_628637_-\|META-domain-containing-protein	unknown	unknown	gnl\|CDD\|377111
NZ_LN890656.1\|WP_095045364.1\|639625_640615_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_LN890656.1\|WP_095045407.1\|638397_639348_+\|class-II-fructose-bisphosphate-aldolase	unknown	unknown	gnl\|CDD\|376459
NZ_LN890656.1\|WP_162292543.1\|636835_637903_+\|PKD-domain-containing-protein	unknown	unknown	gnl\|CDD\|214510
NZ_LN890656.1\|WP_095045391.1\|616530_617328_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732
NZ_LN890656.1\|WP_157913354.1\|622005_622281_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045403.1\|629534_630179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045393.1\|617602_617818_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_157913353.1\|615050_616454_+\|MFS-transporter	gnl\|CDD\|340890	cd17332, MFS_MelB_like, Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily. This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.36175e-69
NZ_LN890656.1\|WP_095045407.1\|638397_639348_+\|class-II-fructose-bisphosphate-aldolase	gnl\|CDD\|376459	pfam01116, F_bP_aldolase, Fructose-bisphosphate aldolase class-II.	8.59936e-108
NZ_LN890656.1\|WP_095045396.1\|621612_621993_-\|DUF4260-domain-containing-protein	gnl\|CDD\|379455	pfam14079, DUF4260, Domain of unknown function (DUF4260). This family of integral membrane proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 114 and 126 amino acids in length. There is a conserved GLK sequence motif.	1.43385e-43
NZ_LN890656.1\|WP_095045398.1\|622297_623197_-\|hypothetical-protein	gnl\|CDD\|274737	TIGR03709, PPK2_rel_1, polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which. [Central intermediary metabolism, Phosphorus compounds].	1.01377e-126
NZ_LN890656.1\|WP_095045402.1\|628771_629527_-\|TIGR00730-family-Rossman-fold-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	8.40669e-60
NZ_LN890656.1\|WP_095045405.1\|633137_634544_+\|form-I-ribulose-bisphosphate-carboxylase-large-subunit	gnl\|CDD\|179787	PRK04208, rbcL, ribulose bisophosphate carboxylase; Reviewed.	0
NZ_LN890656.1\|WP_095045404.1\|630448_632875_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	2.19832e-05
NZ_LN890656.1\|WP_095045394.1\|617905_619786_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	8.73387e-168
NZ_LN890656.1\|WP_095045395.1\|619782_621573_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.42005e-136
NZ_LN890656.1\|WP_095045392.1\|617339_617606_-\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|224937	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning].	5.29871e-11
NZ_LN890656.1\|WP_095045400.1\|624168_626586_-\|META-domain-containing-protein	gnl\|CDD\|377111	pfam03724, META, META domain. Small domain family found in proteins of of unknown function. Some are secreted and implicated in motility in bacteria. Also occurs in Leishmania spp. as an essential gene. Over-expression in L.amazonensis increases virulence. A pair of cysteine residues show correlated conservation, suggesting that they form a disulphide bond.	2.05779e-14
NZ_LN890656.1\|WP_095045401.1\|626768_628637_-\|META-domain-containing-protein	gnl\|CDD\|377111	pfam03724, META, META domain. Small domain family found in proteins of of unknown function. Some are secreted and implicated in motility in bacteria. Also occurs in Leishmania spp. as an essential gene. Over-expression in L.amazonensis increases virulence. A pair of cysteine residues show correlated conservation, suggesting that they form a disulphide bond.	6.25071e-21
NZ_LN890656.1\|WP_095045364.1\|639625_640615_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	1.27743e-26
NZ_LN890656.1\|WP_162292543.1\|636835_637903_+\|PKD-domain-containing-protein	gnl\|CDD\|214510	smart00089, PKD, Repeats in polycystic kidney disease 1 (PKD1) and other proteins. Polycystic kidney disease 1 protein contains 14 repeats, present elsewhere such as in microbial collagenases.	5.88751e-15
NZ_LN890656.1\|WP_095045391.1\|616530_617328_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	7.80079e-116
NZ_LN890656.1\|WP_095045406.1\|634721_635690_+\|phosphoribulokinase	gnl\|CDD\|180975	PRK07429, PRK07429, phosphoribulokinase; Provisional.	7.79872e-131

>NZ_LN890656.1|WP_095045399.1|623491_623911_-|hypothetical-protein
MVTERPSGVTILAIIYILLGLLSLVWSLLVFGVGAVTGLTGAIVGAENMASFGTANFWGGIIGVAGATLDFIIAYGLLNLRPWGWMLALIGLAITVITGVLGLMSGGFFAICCGILGLLVPAGILFYLLQPEVRKAFGR
>NZ_LN890656.1|WP_095045398.1|622297_623197_-|hypothetical-protein
MAKKKKSDKREAKAAPPTVRDLLRVGPEFDLTAVDPRRVVAGPTDKVLARAEAAALEGEVTDLQERLFAESKQGGKRRLLIVLQGMDTSGKGGAVKAIDRVCEPIGLRMTSFGAPTKEEKRRHFLWRIDRAMPPAGAIGIFDRSHYEDVLIVRVRNLVPEDVWSGRYDEINAWEQKWSEQGVVFLKCMLHISKEEQQQRLLDRLADPSKHWKYNPGDVDERQLWDQYQAAYQAALTRCSTAYAPWYVIPADRKWHRDWLLTQLVAETLREMNPQYPTMDFDVAAEKARLAAEKARLAAG
>NZ_LN890656.1|WP_157913354.1|622005_622281_-|hypothetical-protein
MCCILSLLIFIGPRIAGIGWYFLDTARWNAAFSNILWPIAGLLFLPWTTLTYVLMSPGGVSGLQWAVVAFGFLIDIGSIGGGGYSNRQRNH
>NZ_LN890656.1|WP_095045396.1|621612_621993_-|DUF4260-domain-containing-protein
MAPEREARRVSLPRLLLHLEGAAVLVTAAFVYFRLGLPLWAFLVFLLAPDLSAIGYLFGPRVGSVTYNLAHIIVWPLLVGVAGWALGWPWAAPVALIWLAHIGMDRMVGYGLKYPDHFKQTHFDRV
>NZ_LN890656.1|WP_095045395.1|619782_621573_-|ABC-transporter-ATP-binding-protein
MFSSLRRLTTIYKGYRGRLILSQILLIVAALCTILMATQTQKLLNEGLYAGNILVIVNTGITMTVLTAVAGLCLAGTAALAVFFAQGTAYYIRTELFAKIQTFSFANFDQFRTGNLMVRLNADVNTVANAVMFAVLLVLFAPAMILIAVVMAIINTPQLVWIMLLTTVVVLGVVGVLVPRILAAFMKRQRRLDDLNNTLQENLSGIRVVKAFTREELETEKFRGRAEAMRQPAFTAQFLIGILTVFLTVFTQAALILTFRTGGAQVIEGTGLAVGDVISFMQYLQLTIAPLAMTAIVIPFMLRGDASARRIFEVYDAVPVIGDRPNAQPLDPAAVKGRVAFENVSFGFSTPGGMKEPPVLKNIDLVIEPGQRVGILGATGAGKTALVNLIPRFYDVDEGRITIDGVDVRDLPQTNLRDIVGIALQESVLFEGDIRFNLKFGHPEADEEHLTSAARAADSFGFIDNLPQKFDAPVARRGYNFSGGQRQRLSITRTLVPQPRILILDDSTSALDVATESRVQAAIPTFSPQTTIIYIAQRISAVIDLDRIYLMESGTISATGTHEELLAGNTLYREIYESQLGGIDDLPSTPAVGRAQ
>NZ_LN890656.1|WP_095045394.1|617905_619786_-|ABC-transporter-ATP-binding-protein
MTIVDQPTHDYQTLRDKIEGRTKPIGAKNARPDDLFPVLWRLVGYMAGGRNRGRFLLAMGLTVLAVIALVVIPFFNARAVDTFSAPGGTTAELGRWLLYSVIALAIYFVLQTIVERIIADLATSGLSALQQDLFNHLQTLSIGFFDRQPLGQLLSRVTNDTEVVAGFYQDVVATFIRSVFQIVLIVIVMFATNWRLALMAMLMVPALLLITAILQRISGPAFARLQEQVGAVSGFQEEAISGAKVIISNGRQAWAEDSNDALTSNVYDTASRAFFVSLLQFPVTLTMSMLQMTIVLTFGSLQALQGHIPVGTVVGFLGYVTLLTSPLSGIANLMAGALNAVAGARRVFAIIDEQPTVRDAPDAVPYEFKGGRVEFQNVDFSYVPGKKILNQNSFVALPGQKIGICGPTGAGKSTIMNILTRYYDVDSGRVLLDGQDISRLTQESLREQVGMVLQEAFLFSDTVMNNLKYARAGATDEECIAAARQANAHEFIVNLRQGYDTMLTERGANLSQGQRQMITIARAMIANPKLLCLDEATSNVDTRTEKLIQEGLRKLMEGRTSFVIAHRLSTIRDSAKILVVNGGAIVEAGTHDELMDKGGFYYTLFMSQFKGKGPGGAAGTADFVST
>NZ_LN890656.1|WP_095045393.1|617602_617818_-|hypothetical-protein
MTLMTFSLEEEKVRDLLKEVMLELMAERPEIFQDILSEAIEDAGLLVAIAEGESSERVSRSEIEAILAGRA
>NZ_LN890656.1|WP_095045392.1|617339_617606_-|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MKIEFTPSFARDLRKIRGEEIRERLQELMAHVEDADSLEDISGVKRMQSKGAYYRIRLGDYRVGVSVTSETVTFIRFLHRKDIYRYFP
>NZ_LN890656.1|WP_095045391.1|616530_617328_-|5'/3'-nucleotidase-SurE
MHILVTNDDGVHAPGLLALAGAMKTLGDVTILAPDHNWSGGGHVKTLHRPLRVWETALSDGTPALMSDGAPSDCVALALLGRVPPVDLVVSGINTYGNLGHDVTYSGTVTAAMEAVIAGVPGLAFSLAADDKTVERDYAPAAEFARRIVRAAIDNGLTAELLLNVNVPPLPLAQIKGLRLTRQGLRLYRDALDERRDPRGQPYYWIGGDYPTGVPDEGTDFGALQDGYVSITPLRLDLTHYRTLEQLAGWKWDEDLATDLDGRNG
>NZ_LN890656.1|WP_157913353.1|615050_616454_+|MFS-transporter
MTAIRPHHRLLYSAGSLGVALSYQAFSAYIQFLYIDTLGVRAAWIGLVWALYGLWNAVNDPLVGYWSDRTRSRWGRRVPWMAGSLLPLLITFYLLWLPGGGTDWSELSLLFYFLFIVLLFDFFWSVYVMNWTALFPEMAQGESQRAGVSAQREVFSIFGLLVGVALPPLLAGADWSNRGSMAALLTAVTFVSLLLGLLGSRERPEFAAAPSPSFRESIRLTLGNRNFIIFLAANLMIQYVFLAMASSIPFYAKYVLHIQGPTTLFGVTLDADLQNSLLLAAAFLAALPAMAVWWALARRYGAWRALRAAALLAAATALYFFFPQTFAAGILGTTLFGLSLAGLLMLTNPLLADITDEDEVLNGARREGMFFGMNGLIIRLAFVIQGLLTAVVFTLTGYVSPSAGVLFPPQPDTALFGMRLLTGGVPAIALVVAFLLLGSYTLHGARAAQVRAQAATMQADKLSSLEN
>NZ_LN890656.1|WP_095045400.1|624168_626586_-|META-domain-containing-protein
MKRLALILGLVLLFALAACDTMGPQEALPTTGVGTTVAGEATAAPVEATAEVPAESEGETAATPGADLLGTTWEWVSLVDAAGQTTATDPARYTITFNEGDVANVVADCNTVIANFFTDGTNITIEPGMTSLVACPEDTQDQMFVNALGSSESYVVEDGELFITLVGGSGTLMFRAAGTGGAAEAPVAAPALVGTTWEWTEFTTMLGTTAVADPTRYTITFNDDGTANIKADCNTVLATYTSDDTGALPLTLGPSTLVACPPDSQVDVFLAGLGSLTMGAYQFDGSDLLLRNTAADGGVMRFRAAGTGETTAPAGTLTGTTWEWTETVTMLGATAIADPTRYAITFNEDGTANVTADCNSVTATYTADETGGLSIILGASTAMACPEDSQATEFLAGLMATGAYELADGGLMLINTAADGGVMHFRAAGGGETAEPGAAGATLTGTTWEWTESITMVGNTAVADPTRYTITFNDDGTANIKADCNTVLGNYTSDETGALGLTLGPSTLMACPPDSQVNEFLAGLQSMATATYQFENGDLIIGNMAADGPALRFRAAGAAETAPAADTLTGVTWQWVSTQTPVEMITVADPTRYTITFNEDGTAGIVADCNVGNATYTAAPDGAIDITLGVSTMAFCVDSQDQQFRTGLDGAAIYFFQDGDLYIDMVASSGTMRFTAAEPSKGEAGGGLPAVAGEFAGTVWQLTTITKPDGTITINDPSRYTVTFNADGSANWQADCNVGSATYTGSDGGLAVTMGASTMAFCPPGSFDQIFLGGLTNAMGYRLEGGNLLIDMLYESGTMTFAPAS
>NZ_LN890656.1|WP_095045401.1|626768_628637_-|META-domain-containing-protein
MKKYTLMILIVLLAALVVACQQQPDVVPTIAPAEETPVTEATAAPEAVATEAPAEATEVPAEATAEATAPPAVQPVAQFCDVVDPTLINLNTQGIYSEWQADCVAATDYADDTPDIRGLPQHITITFDGRASDTHQAGEPIIYIIPAAAYRDLWDAAQNPLVGENLDALTRWIGRRPSAVSPQNMPVLPIEEARAVNDLAVQGQFLEFDEWEGIRFVARFAQDPHPLTNEGLRYIFQGFVGANDEVLVAAFFPVTTAHLPATIEEISAEDMAVIEADPVAALALSGVELNALTDADWQPALDVLDALVGSLQYGGTETEEEEVEIAPTPDGPPAAYAVVTGAAGVNVRSGPSTAFSSLGVAPFGAELELIGRSVDNNWWATPLNGAPNGRGWVSAGFVESFNTGGLPVVAGPPLPTPVPSPTPEPTPSAQTAFWVDRTQIDQGQCTTLRWSVANIQAVWVYEVGQSFEQFPATGDGSRQVCPSATTTYEMRVQLRDGSITTQRVTVNVTPGNRLANTNWVLANIGPAGLLPGRPPTISFGVGNYVEGFSGCNTFWGNYSLFGTDGLAMSVGTRSLVACEEDVTAQEQAFLSALHSTGAFTINGNELTLRDSGGVELLRFLRQ
>NZ_LN890656.1|WP_095045402.1|628771_629527_-|TIGR00730-family-Rossman-fold-protein
MNVKNQKLSLLQAATDVEKRFLAGPRERSKDLESATRYFLEFIQGFETLGAIDRPCVTVFGSARLGETTPYYALARELGRRLAAEGLGVMTGGGPGIMEAANRGAKEAGGLSIGVNIELPFEQEPNPYLDIFIEFNHFFIRKVMLVKYSSAFVVFPGGFGTLDEAFETVTLMQTDKIEDFPLISMGVAFWQPMADFMRDTLVTQGTIGKRDIHLWSPTDSVDEAVGLILEAVARQRESAARATPDEAQANK
>NZ_LN890656.1|WP_095045403.1|629534_630179_-|hypothetical-protein
MEPLDGLIYYPSRYDPPLGHAGFEARLTGGAGGRYFDASRVLFPIEQAGTLRRLAVAHPYRMGEELRFASGRVRLEAFDGDVIEIVTFGGRAHITTTGEQTVVRAESSAPFLPLSDAPDSPFVILESEFEAVLAQSRAGWGGDESRHLDRLGEVEPLTLFVAAIATLDERLTRLARADEDEATRAALHLVRQMRHTLERAGEWPADAPDLTQLL
>NZ_LN890656.1|WP_095045404.1|630448_632875_+|right-handed-parallel-beta-helix-repeat-containing-protein
MSTEVERDSASGVSPWLASLMLRRGGATLPRFAVYYQRLSGLSRGMRRRLRRKLAVTVTGAALLLALSGGATWAQPEAPEATITVVNGQVAVNANGKCSLIEAIQNADSKTNGQPNNDCAAGNPSGADTINLPANGLFTLNNVQVSDVIGDIGLPWISTAMTINGNGSTIQRNSNAPEFRILAVGNNGNLTLNNTTIRGGRVESGYSSATYTYYGGGGILNQGVLTITGSIVEDNSNYHFYYFGYGGGIDNAGTLTISSSSIRDNTTSGYWSGDGGAIHSHNGSVTILNSVISGNTVSGDPAYGGGISISSESSLTVDNSTFSDNYDDGYDSAAGGGIASWGSATITNSTFTGNEVQSVYDEGQGGGIVNAFSGVMVITNSTISANSADATGGGVANFGEITFNNTTITGNSNGGVFTSCQDQDTINRFRRTIVSGNTGGEVTLDYAGNCPGGVVVNKNNVFGRSNNAGLIGFSPGATDIVPAGALNTILSPLANNGGPTQTHALPANSPALDRAPNADCTAAPVNGLDQRGQPRNQNGNGAAGSNDCDAGAFEREGGPVSADPGFYASITGAGNVGGVAFTPADVLKFDPNAGWSMFFDGSDVGITKNVAAFELQDDGSLLLALGAKQAVGNLGTVTPQDVLRFVPSATGDNTSGSFSLWVDGSAVGLAAAGEKIDALGLTADGRIAIGVTGALSVPGSGGATLKAQDEDAVGFNRATAAWTNFFDGTPIPGLKGEDVNALWVNPTTGELYITIIGAFNVAGVAGDGRDILKLTPDAGATGGYTAALVYDGSTQGLLTNIDALEMIP
>NZ_LN890656.1|WP_095045405.1|633137_634544_+|form-I-ribulose-bisphosphate-carboxylase-large-subunit
MEVRPVAIHNPLAGPKTVKARPTAELSDAYKAGVRAYAVDYYVPDYIPQDTDLLCAFRIQPRGVDMIEAAAAVAAESSTGTWTEVWSNQLTDIDFYKAKVYAITGDIAYIAYPLDLFEENSVVNIMSSIVGNVFGFKAVGALRLEDMRIPLALVKTFPGPRVGIYDERVWSNKWDRPLIGGTVKPKLGLSPKAYSTIIYECLSGGLDTSKDDENMNSQPFSRWRDRFMYAQEAVDRAAAETNEFKGHWHNVTAGSTEESLRRLEYAYELGSRMVMFDFLTAGFAASADIFKRAGELDMIVHCHRAMHAVFTRQANHGIAMRVVAKWLRLTGGDHLHTGTVVGKLEGSWNDTLGIIDILRERYVKANLEHGLYFDQDFGGLKASWPVASGGIHVHHVPDLLKIYGNDAFFLFGGGTHGHPDGSRAGAIANRAAVEAVSAGQTLQQAARSCPELRKSLELWADVKFEVVQ
>NZ_LN890656.1|WP_095045406.1|634721_635690_+|phosphoribulokinase
MNRKTIMLGVAGDSASGKTTISKGIAEALGAENVTVICCDHYHKYNRVQRRELGLSALHPDCNYIDIMEQHFRLLREGQPILKPTYNHNTGDFDGPTYVQPTKYVIIEGLLPFHSRLMRLCFDVKVYLDPPEELRRAWKIKRDTSKRGYTHEQVLTSLQGRGDVSPRFIHPQRAYADMIVRFYPPDAAMDSGDSHLNAQLVLLPTLAHPDLSDVLSHGPNGPTHHPALRLDLARFEGKPADFLEIDGSVAPDKAEELMGIIRSHLPPNAGLDASKLGRYLYGLEERRSYPLALTQLLIAYHLVRTADQMAYATDRAVAPAAN
>NZ_LN890656.1|WP_162292543.1|636835_637903_+|PKD-domain-containing-protein
MRNNSSDSVDYSSWEGGDYPWLVVDYRVEYKDFLSANISYDDWAGLAPFTVQFLDRSYGCATSWHWDFGDGATSTQPNPSHTYSSPGYYGVSLTVSNGTSSVNAGDGIYVVEPVTQFFISPATNATIGGIAAQAADVLLYDRPSNTWTMVYDGSAHNTLKNISAVDFDGTDLLLTFSANQAIPGLGTATPYDVVRFTPDDPYTYPLGSGSFSWQFQGRPKGLTTAGEKIDAYAYSWAELLSTSGAASLPTDPIIKRADEDLFSWYAWDNSWLTWPLDGSTITGLAAEDINGVAYDWTDDLYITILGTFNLGGISGDGKSIVLLEATGGGYTPSLVPWLAPGATFPSTIDAIEVVR
>NZ_LN890656.1|WP_095045407.1|638397_639348_+|class-II-fructose-bisphosphate-aldolase
MIVTTAQLFQEAYGRYAVGAYNINNMEQALGLFQGHIEAQAPFIIQLSKGARKYANARVLEAIIRAVESEYPEAIFAVHLDHGDEQTCYDCIDSGFYSSVMIDASHETFAENVAITRRVVERAHAKGISVESELGMLGGVEEDIKVDEKHAMLTDPDEAQAFVEASGCDSLAVAIGTSHGAYKFAGSQGLHFDRIEAIQAALPGFPLVMHGSSSVPQSEVQRINAAGGALNPNAKGVDDSQFGRAAKLGVTKVNIDTDGRLVWTRVHREFFRDHPEGFDFRTPGKEYVKAYADFIVDKSRKLGSAGHLEEVRAAVM
>NZ_LN890656.1|WP_095045364.1|639625_640615_-|IS110-family-transposase
MSDTYSFLGIDIAKATFEAVLQVGPRQNSRGFDNDPADFRALSRWLDKNGAGRVWAVQEATGRYGEALAHYLSQQGHAVSVVNPARIKAYGASKLRRAKTDRLDAALILDFGRTQRPALWTPPTAEQQELCALVRRVADVQHMHQQERNRLTAGSHPPIVQASLQAILAVLEAQIVALQKAIEAHLQAHPALRHTCQLLRSIPGIGLLTAVRLMVELPNIHAFDNPRQLVAHAGLAPSVCQSGTSVYGRGHTSRKGNAVLRAQLYMPALVALRHNPVIQAMQQRLQRAGKPKMVIVVAAMRKLLHLAFGVLKSGRPFDPAFALSPALGT

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Crispr_ID: NZ_LN890656_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_8

748231-748461

Orphan

Consensus_repeat	Method
ATTTCGCGCCCGCCCTTCAGTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACC	PILER-CR

2 spacers

The CRISPR arrays of NZ_LN890656_8

>merge|NZ_LN890656|8|748231-748461|PILER-CR
TCACTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACCCTGCGCGGAACTGGAAGTTCCGCCTACACCCCTTGCCACATTTCGCGCCCGCTCTTCAGTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACCTCCCTCCCGCCAACGCGGAACTGGAAGTTCCGCCTACACCCCTTGCCACATTTCGCGCCCGCCCTTCAGTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACC

>NZ_LN890656|8|1|748231-748461|PILER-CR
TCACTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACCCTGCGCGGAACTGGAA	GTTCCGCCTACACCCCTTGCCACATTTCGCGCCCGCTCT
TCAGTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACCTCCCTCCCGCCAACGC	GGAACTGGAAGTTCCGCCTACACCCCTTGCCACATTTCGCGCCCGCCCT
TCAGTATCGGCCCGTAGGTGGAGCTTCCAGCTCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_157913365.1\|746766_748170_-\|exo-alpha-sialidase	unknown	unknown	gnl\|CDD\|271234
NZ_LN890656.1\|WP_095045485.1\|740592_741261_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LN890656.1\|WP_095045496.1\|755658_756441_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|379293
NZ_LN890656.1\|WP_095045484.1\|738842_740600_+\|PAS-domain-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_LN890656.1\|WP_095045498.1\|757717_758905_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276965
NZ_LN890656.1\|WP_157913367.1\|752887_754255_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_LN890656.1\|WP_095045483.1\|736975_738766_+\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226951
NZ_LN890656.1\|WP_095045489.1\|743523_745638_+\|sulfatase-like-hydrolase/transferase	unknown	unknown	gnl\|CDD\|293766
NZ_LN890656.1\|WP_095045486.1\|741414_741804_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LN890656.1\|WP_157913366.1\|750631_752869_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_157913364.1\|742643_743123_-\|DUF2062-domain-containing-protein	unknown	unknown	gnl\|CDD\|378263
NZ_LN890656.1\|WP_095045487.1\|741777_742455_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223477
NZ_LN890656.1\|WP_095045482.1\|736092_736686_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_LN890656.1\|WP_095045501.1\|763911_764040_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|377269
NZ_LN890656.1\|WP_095045500.1\|760882_763798_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185219
NZ_LN890656.1\|WP_095045490.1\|745752_746625_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183277
NZ_LN890656.1\|WP_157913368.1\|758908_760489_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_162292538.1\|754711_755488_+\|ORF6C-domain-containing-protein	unknown	unknown	gnl\|CDD\|371128
NZ_LN890656.1\|WP_095045492.1\|748594_750460_+\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_LN890656.1\|WP_095045497.1\|756509_757646_+\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_157913365.1\|746766_748170_-\|exo-alpha-sialidase	gnl\|CDD\|271234	cd15482, Sialidase_non-viral, Non-viral sialidases. Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates, they play vital roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial and eukaryotic sialidases.	2.88567e-16
NZ_LN890656.1\|WP_095045485.1\|740592_741261_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.93944e-76
NZ_LN890656.1\|WP_095045496.1\|755658_756441_+\|ParA-family-protein	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	2.68207e-70
NZ_LN890656.1\|WP_095045484.1\|738842_740600_+\|PAS-domain-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.84234e-50
NZ_LN890656.1\|WP_095045498.1\|757717_758905_-\|hypothetical-protein	gnl\|CDD\|276965	sd00038, Kelch, Kelch repeat. Kelch repeats are 44 to 56 amino acids in length and form a four-stranded beta-sheet corresponding to a single blade of five to seven bladed beta propellers. The Kelch superfamily is a large evolutionary conserved protein family whose members are present throughout the cell and extracellularly, and have diverse activities. Kelch repeats are often in combination with other domains, like BTB and BACK or F-box domains.	4.47632e-32
NZ_LN890656.1\|WP_157913367.1\|752887_754255_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	3.93206e-08
NZ_LN890656.1\|WP_095045483.1\|736975_738766_+\|PAS-domain-S-box-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	4.48503e-28
NZ_LN890656.1\|WP_095045489.1\|743523_745638_+\|sulfatase-like-hydrolase/transferase	gnl\|CDD\|293766	cd16147, G6S, glucosamine (N-acetyl)-6-sulfatase(G6S, GNS) AND sulfatase 1(SULF1). N-acetylglucosamine-6-sulfatase also known as glucosamine (N-acetyl)-6-sulfatase hydrolyzes of the 6-sulfate groups of the N-acetyl-D-glucosamine 6-sulfate units of heparan sulfate and keratan sulfate. Deficient of N-acetylglucosamine-6-sulfatase results in disease of Sanfilippo Syndrome type IIId or Mucopolysaccharidosis III (MPS-III), a rare autosomal recessive lysosomal storage disease. SULF1 encodes an extracellular heparan sulfate endosulfatase, that removes 6-O-sulfate groups from heparan sulfate chains of heparan sulfate proteoglycans (HSPGs).	1.31349e-92
NZ_LN890656.1\|WP_095045486.1\|741414_741804_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	0.00609981
NZ_LN890656.1\|WP_157913364.1\|742643_743123_-\|DUF2062-domain-containing-protein	gnl\|CDD\|378263	pfam09835, DUF2062, Uncharacterized protein conserved in bacteria (DUF2062). This domain, found in various prokaryotic proteins, has no known function.	2.06477e-05
NZ_LN890656.1\|WP_095045487.1\|741777_742455_-\|alpha/beta-hydrolase	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	2.09217e-23
NZ_LN890656.1\|WP_095045482.1\|736092_736686_-\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.18511e-11
NZ_LN890656.1\|WP_095045501.1\|763911_764040_-\|DUF433-domain-containing-protein	gnl\|CDD\|377269	pfam04255, DUF433, Protein of unknown function (DUF433).	2.0649e-11
NZ_LN890656.1\|WP_095045500.1\|760882_763798_-\|hypothetical-protein	gnl\|CDD\|185219	PRK15319, PRK15319, fibronectin-binding autotransporter adhesin ShdA.	1.88641e-05
NZ_LN890656.1\|WP_095045490.1\|745752_746625_-\|EamA-family-transporter	gnl\|CDD\|183277	PRK11689, PRK11689, aromatic amino acid efflux DMT transporter YddG.	6.09326e-21
NZ_LN890656.1\|WP_162292538.1\|754711_755488_+\|ORF6C-domain-containing-protein	gnl\|CDD\|371128	pfam10547, P22_AR_N, P22_AR N-terminal domain. This domain was identified by Iyer and colleagues.	5.15287e-26
NZ_LN890656.1\|WP_095045492.1\|748594_750460_+\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	6.25507e-26
NZ_LN890656.1\|WP_095045497.1\|756509_757646_+\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	2.33642e-40

>NZ_LN890656.1|WP_157913365.1|746766_748170_-|exo-alpha-sialidase
MITTARPFVGRALLALVWLAAGAALLFSRAAPAASSVGEAEKEGSGRSLAGQVDITAAPVASSSAAGFAAARLWSGEDDWEPATAADPSSPYVYQLTTRYTGPAACARCAQPAIIFRRSADGGATWEPDRFIKPSRRTQNDPMIEVANDGAIYVAWLEAYRPGVMFSKSTDHGDTWSEPVTFTHKTRMPRWNDRPVLAISDDGRHVYLAFNASHSYVAVSHDYGATWAEPVKTSHDRRYWFHSAGAVAPDGTAYFATVDFSQSYAGPAHVGVLRSTDGGQTWQYTRLDKSAVMADCGWAAGCTHGFLGGSIGLAVDDAGAVVVAYHTNDAPRDPQRMYSRRSADGLAWEPRQPLSAEALEHNAFPAVAAGPGVDDFRVVWQGNNDGQTDAWNTWYRRTTDGGRTWSEPLRLSDTATTPAPYHSADGYRFPYGDYLELAVDGDGVNHVIWGEGLSYVGPGGSWSTSGR
>NZ_LN890656.1|WP_095045490.1|745752_746625_-|EamA-family-transporter
MEERRRGTLVGSTAVLLWATLATLTTLSGEVPPFQLLAMSFTLAFLVGVGLWVWQGRRGAAVRLRDRFRLPAAVWALGIYGLFGYHFAYFMALRLAPPVEAGLINYLWPLLIVLFAAFLPGERLHGRQIVGALLGFAGAGLIVTGGQGLSINPEYAAGYAFAVACGVIWASYSVLSRRAGAVPTSAVGAFCAAVAALAVVCHLLFEQTVWPVGWAWAAVIGLGLGPVGAAFYTWDYGVKRGNIQTLGTIAYAAPLLSTALLVAVGLAEPSWVLVVAALLIVGGAIVGSRG
>NZ_LN890656.1|WP_095045489.1|743523_745638_+|sulfatase-like-hydrolase/transferase
MLASVCLALLLILGVGLLLYAGSGRAAAQTNRPNIVIITSDDQDVDSLPVMRHMLSYPRGSWVNFSNAFSGNSVCTPSRATLLTGQYSHTNGVLGNNWGAEFNDYNALPVWLHDAGYRTAVIGKYLHEHMENPPGWDQFAIIEGSVDTHTAMGVDFINQDDGPFFLWLAYRQPHVPASPPDRYLNTEVYVAPDRPNFNEADVSDKSAHIRSRPLIGAAHIAEMRAERIRSQRSLLAIDDGIKTIIDTLYAAGDLDNTLIIFQADNGFQWGAHRDYNKLCPYEECSRVALFIRYPGNSGNRTETHYVSDVDLASTILDYVDVAPGLPQDGDSLIPLIANPSAPWSDAVLIERPPGRVGYYAIRVPNWTYIEYHTGEKELYDMVADPYQLENKAGRPAYAAIQNQLKDELAALKEGDDPPPGTATPTPTPTATATATPSPTPTPTATPPVGAAFETIYISSSGTVTIGATTYADEDILAYDADTAAWSQLFDGSDIGLGPVDLDAFQWRENGTLLLSLDAPLTLAGAGAVDDSDVLLFTPTSLGPTTAGSFALYIDGSDVGLTTAAEDIDAIALPGNGDLLLSVGGNASVNGLTARDEDLLRLSPSQTGETTLGSWTLYFDGSDVGLSRSIEDVTGVYVDQATGRLYLTTLGNFDVPGLSGRRGDVFTCDPTALGATTQCTFGSAPVWRSSEAAGSYIPIDGLDVD
>NZ_LN890656.1|WP_157913364.1|742643_743123_-|DUF2062-domain-containing-protein
MNSTQLKQMVTRRVAQAKEQARTMRRELTESDLPAGTLALAFAFGTLISTIPVPLLDMALAAFVMRRLGGRLPRAPFFGGMAVANNLVMAPLYASTPKVGGLALGWVGTHTPLVAPEAFLARILVGYLLIAAGLALGSFVLAQTGFRGYRFTQRQRFAN
>NZ_LN890656.1|WP_095045487.1|741777_742455_-|alpha/beta-hydrolase
MNDVSHGTTIQAAGAPLAEAKGALILLHGRGATAASILDLAHYLAQPGLAFLAPQAAGNTWYPYSFLAPLGDNEPYLSAALRAVAETAARAAAAGIPERRLFFGGFSQGACLAAEYMARHARRYGGLLLFSGGLIGPPGTPRDYGGGFDGMPVFLGCSDVDPHIPLARVEETAAVLGGLGARVDQRIYPRLGHTINEDEIAAAAQLLAGALGSGAAPSGGDVLAE
>NZ_LN890656.1|WP_095045486.1|741414_741804_+|response-regulator-transcription-factor
MTSGKDSTVALLATSSDTLAAGMSALLLSIPPIRQVEMREDLGTLVAQLDGQNPALIVIDSVLIDLTSSGQIDALRQRAPHSLLVYLTEDMSEFRRLETATADTVVMKGTDPAQLAQRLEQLLREHVTT
>NZ_LN890656.1|WP_095045485.1|740592_741261_+|response-regulator-transcription-factor
MSNPIRILICDDHAVVREGLRALISTETDMEVVAEAADGEQAIAAYRAVVPDVALVDMVMPRVDGLETIRTIKGEFAQARILVLTSFAEDDMVFPAIKAGALGYLLKDSSPEELLRAIRDVNRGEASLHPSIARRLIQELSQPTTLPPTPEPLTEREVEVLKLVARGYSNEDIADALVVSERTARGHVSSILSKLHLANRTQAALYALREGLATLNDDGDAD
>NZ_LN890656.1|WP_095045484.1|738842_740600_+|PAS-domain-containing-sensor-histidine-kinase
MTNPPDPFASGTFFAHIFHASPVAMIVTTPDDDRYVDVNDAYAALVGIPRLALRGQRNVHLLQPEGATATGARQLVEEPLCLRAADGRLHDVVASTQFEEWDGRPYRITLVQDLTDYNRTGAALRSSEARFRLFFDSIPLPIFVFDLETWRILDVNPIAVELYGYSRDELLTMTMLDIRPPETVASYIATIRALPADSRFVDVWRHRKKDGGLMDMELISYAFDLDGRAVRLHILRDVSEKLALQEALRRNQERLKIVADVTTDVIWEYDMARGAVDTVGLFELFGYAGDSSRPWEWWFEQVHPDERDAVEKATRDALAGDRTIFSTQYRFLHAAGHYIYVYNRIHIVRDADGVARRMIGVTIDVSRQVAMQEAATLAKLEERRRLARDLHDAVTQSLYSLSLMAEVARRHATAGDNRAANEYVGRLGELALQSLKEMRLLVYELRPSALEQEGLTGALQIRLDAVELRSGIQARLMDELRHPLPPDIQREFFLIAEEALNNALKHAAASSVWVRLGSDAHSARLEISDDGQGFDPAAARSSGGLGLISMRERIEKLGGQFSLTTAPGQGTTICVGLEYGRGDNE
>NZ_LN890656.1|WP_095045483.1|736975_738766_+|PAS-domain-S-box-protein
MQTGVLTPDTLFFRVFHDSPVGMVITTVTEGRYVEVNAAYARLLGYTVAELNDQSLALMGLEHEEERNMVLEVLRRVGKLGNVPLTLRTRAEEPRTCIASVQVEEIDGQPYLLFIVQDITEQEQAQAALRSSEQRFRLFFQSVPLPLLVIDDAGGAILDVNAAACLTYGYERDEFLTLKWADLPAASAKPVPPRPGGNGQAPTQPAAGQPTATRHRLKDGGIIDVDLLTYSFLLDDRPATLTIVEDVTEQRANETNLRHSEERLRIIAEVATDAIWERDMATDEVIWSSGLASMFGYTNSADENHNDWWINHVHPDDRPAINAAVEAALASDAAHWAGEYRFRRADGRYANVLDRAFIIRDSDGRPVRFIGAMVDITEQFHLAEAAAQAALEERQRLARDLHDSVSQSLYSISLMAEAARRRADSDDQALVPEFIHRLGELSQQALRQLRLLVYELRPGVLAQEGLAGALRHRLEAVERRAGLQARLIDESTARVPLPLKGKVFHVAQEVLNHSLKFAAAHAVLVNLRTTEAEIHMQFRDDGTSDDRHTPEAQDSLEVIRRHVAELGGELTPATTANGAVLSIRIPMTGESAADPS
>NZ_LN890656.1|WP_095045482.1|736092_736686_-|VOC-family-protein
MKKLQTQGVHHITLIGADRQTSIDFWEGVLGMPFVFEQPNLDVPDDNHLYFDPGDGRLITVFTREDRKPRDRPTPEVIGAVHHIAFTVSRAVYTQIRERLDERGISHSGEVDRGFMYSFYFRDPLGFLIELANYKFEPPAGSSHAEVLLEAHLLRTARGDHHISDVHVADAIEVLTERGTRSLSADRGPRDPYGKEK
>NZ_LN890656.1|WP_095045492.1|748594_750460_+|APC-family-permease
MLNHIRHLLIGSPLSSAHAGETRLDKVRALASLSPDALASVAYANQEIYLGLLVAGAAGLLRATELALVITGLLAVLALSYMQTIAAYPSGGGSYTVARDNLGELPGLVAAAALLLDYVLNAAVSLTAGVAAIASAFPALWPYRIALSLLLLLFITLINLRGIREAGTAMIVPVYLFLVIYLGLIAYGIGVALIQGPGVFPAVIPQPAELTTGVGLAPVTLFLLLRTFASGATALTGVEAISNAVPIFKPVESDNARRTMAAMAVLMGILFLGTIGLTQYLAVVAGAEETILSALARRLFGSGPVYYLVQAATLLVLIVAANTSFTDFPRVVSLLARDAFLPRQLRAVGDRLVFSNGIVLLAALAGLLIVIFQGDTHLLIPLFAVGAFLAFTLSQSGMVVHWWRERGRRWRAKAAMNGLGALATGVALLVIGAGKFTAGAWIVILLIPLIVWLFRSIRAHYAEVGRQLRLHEAAPPVGCHVPARIVMPVAGVHRGVIAALDYACSIADDVTAIFVELEPGTAEPLRARWTAAGLDRVARLVTVPSPYRSLLGPFLDELDRMDDAGDGPPVSVLIPEFVPAKWWHFLLHNQTALPLKWALIYRRHRHGRSRVVIDVPFYLDR
>NZ_LN890656.1|WP_157913366.1|750631_752869_-|hypothetical-protein
MARLILLLVIGLLAASCAQSADPPQLNSATAQSDVFPSPQPATATDTSANVDSSDNERTETAEPKQSDGSAGEAVEPATSAASSEQLRIRLDGPTQTFSLDNAERTVPRGILREVGFFGGGGGDGPVCDPYLKPTVVDFWGNKFVTEWMVDAVIASCGWDPNENVLVQVISQDGKVMKENTMTLGGMEGALYFQYTPDLNSALGVYTVRLSGISGSVEQTIEVQPPNGPRVYMDGGRIVLFQFQPNETIRLYSYEPISIQDAFVASQLSPSVVYTLTVWNEFVTDAEGQLIIEGYPGSIFRIVGEQSGEVKVTPLDTFHSILTEFKDVSVLRPTDEEISQAPDIWSLVEFIDHVEPGERTYELTTGASEPLYWRMRWCAVDTDILKANLTNISMDFKIDGLSVGNPQLRMSEETHENTGWACFRWATIVTNWPIDRATTLEIEYELRADVDDGRQIYPAGAYRQVVIVRSTPDAGNSSAITPPADTLGKPYEPPPAEYVMYEPLDSLPTVDSVKPTIQSLLTASDGEGQVGQSAPWIAADSPESLEPVPSTGPEFWNVLYVDTCGWPTIGEYGVSIQYPEGSVEFDTNFKINTLDECTRYLKYLLPQASLGTYIIQFATYENMKQVVNLVPPSGPRLYVFHEGNQGSTSLLLHLFAPHETVRLYEYKPDEVAPGTLVLVGWQEFQTDANGQLYIGTPYCISNICMSDPNAYLPTFVAIGDISGEVNEFNQFQERQVVGESILVSP
>NZ_LN890656.1|WP_157913367.1|752887_754255_-|hypothetical-protein
MDDEKRNLTHEESSHGEWPSIRRWRQWWSEKLLPRYREINRKYLGLPRLSLWGLVLLIVGVIGFYSDLSPFRQSRQMTGDFRVAVAAFEVMGDREARQLGDELAQGVFLRMEQAFDELSLDFTIEIWGPAEVGTISGATQEERAYSALHMAEEIRADVIIYGLLDTTQAIWTLTPEFYISDQNFVDAQEITGPHEIGRPFGTAGQGNVTTRIDISTKLGARSQLLSLVTVGLAYYAARDYSHAQAYFQQIESEYDWSEVGGREVLYLLLGNAAGKNENLDLAEDAYQKALAENPDYSRAYAGLGSIHYIRALKPAEETGDLASINVDLINKSIASYEQAAAATVRPTLSDIVTKVHFGMGQAYLALHLQDESKPVSPATQEFEAVIADFGDGDNPRIRELAAEAHARLGLIHTTSGNLVEAITEYEQASLLLFDVPERQRLYEERLEELRNAILE
>NZ_LN890656.1|WP_162292538.1|754711_755488_+|ORF6C-domain-containing-protein
MSDKALVVSEQRDVDFYGDELTAARGSDGQIYVSIRQMCESLGVDDNGQRQRMRRQPVLSEGIGVCKLHTPGGVQDTFVLRVDLVPLWLSGIRTSAVSDEIRPKLERFQREAAKVLWEAFQQGRLTADLDFDALLAQDSPEAQAYKMAQAVMQLARNQLLMRSQLADHAQRLETIEAQLGDTGRNVTPDQASQLSQAVKAVALAQGKKTGRNEFGAVYGELYRKFGITGYKMLPARRFDEAMKFLTDWHEELGGMLPF
>NZ_LN890656.1|WP_095045496.1|755658_756441_+|ParA-family-protein
MTKIIAVAMQKGGVGKTTTAINLAAALSELGRRVLAVDFDPQGNLTQHAGFDPDRVSPTIYDALKAEVDGGPGDLRAAIYETAEGFHLVPSQPELSLVEVTLINSLSRERVLAGLLGDVAPAYDYVLIDCNPSLGLLVINALTAADSVLIPIQTEYLAARGALMILSTIETIRRKRLNPNLKIEGILLTMADTRASLTRDIQAAVEQQYGDNIRVFDTVVRRSVRFAESAAAGRSILAHDPRGPGANAYRAVAKEIDKAN
>NZ_LN890656.1|WP_095045497.1|756509_757646_+|ParB/RepB/Spo0J-family-partition-protein
MTKKRTKINLSPPIQPRGGDLDKLFAGAGDVEQAAGLQLLAVRLDAIDPDPSQPRSTFNEESLRELADSIRQDGVIQPIEVTQSTPGRFLIVHGERRWRAAQLAGLETVPAVVRRRDYDDVTRFVRQVVENIQREDLNDVDRAAALLRLRKLMQEEIDATPADQRVAGTTWGGKVTWAKVGGRLGYSRQRIHQLIQLLDLPDEIKDAVREGELSERDTRIYQGLTASQQRALHRARMAGDLAAGDVRPIARLLRESPEMTVAAATRLLAATAEDDDRRPTADNQSPTDESAPIAEDAFAPLHPRSPAPLLSSDPLRPARVGAPTSIERLDWVRGHLARVDRQGLTAAERKELLRLLKLIKEDVTSLMAALTDARPDDF
>NZ_LN890656.1|WP_095045498.1|757717_758905_-|hypothetical-protein
MMQSNGRSGRVAAAMTLILLVCRLAAAGRAAATPGQGYWQETADMAYSRSGHTATLLLDGRVLVAGGNYYSAAATADAELYDPALGQWSPAGEVDLPYTGHRATLLQDGRLLVTGGGSRIDPESTQAGAFLFDPTTNSWTAAADMTTPRAYHTAVLLADGTVLVAGGLNSGGNQATSERYDPATDAWQPAASMHNARASHVAARLPDGQVLVAGGYFPGNVAERYDPAADRWVFTGGRNLSFTSYWLSGIEMPGGQVMVLDDEYGAIYDPLTETWADSAPPGFRRAHALVVLADGLLMMSGGYDARQPSEYYPYLDDVSIFYPPAAMALRGWETGPSMRTPRALHTATLLADGRVLVAGGEFVYALNSAELFTPDYDPPPPPWPYNGYVPLVIYK
>NZ_LN890656.1|WP_157913368.1|758908_760489_-|hypothetical-protein
MMGSAVAGSAVADSGRATTDILVADGLVTVAADGLCSLIEAIHNANDTATGQPYPDCAAGDPTGWDEIVLPSQSAFSLIEADNTTYGPSGLPVITSPLRINSEARATIARDPAAEPFRILAVGRDGRLSLGSLDITGGEATGTGRAVEFTYAAAGGGVLNLGQLILEETVISGNTAFVGGGIYNGGELDGHVHLVANQATDEGDALLNFGDAELRDSDIRENDGAQATIINEGRLSINGGYIRDNGAHYGLLNRANLTVEYVVFQDGQTAIANENVATLRDMTITGHNLAVDNRASALIERSALVNNNRGIYNQGELRLFSSTISGNHSGGVGGGILATEGRIYGSFNTISDNSAARGGGIFVSANLDSISYSCTSGSVRLYYSILSGNGGTIGPEAYVYSSTYRQCRGWLLLRQSVVGHDSDAGVVNTSLEEAIIPTGPPASILKPLVEHNHFWRNFHGLPAGSPAIDALPDATCDQEPVYGVDQLWQDRNQDGDLQPSDHECDMGAVERQPPHHIHAPFIARGE
>NZ_LN890656.1|WP_095045500.1|760882_763798_-|hypothetical-protein
MQRAPLVPLLAARLAHDPRLAARLAWSYDRLRALPRRRRRLMRRLRLSLAAAALLLALAPGPTGLATSVRASTVTGMVVADGAVEALDNYVCSLIEAIDNANDTITGQPHDDCAPGDPLGADTITLPDDGAFVVAYYVADITHGYSGLPLITSTITIDGNGSTISRDSDDDLRFFTVVGDDVYQSGHLTLNDVTLSDGRQDYYGGAVAVYDAALTLNGCTLSGNGATYGGAIYADNGTLTLTATTLSDNFADYGGALALFDSETVIDDSTIDDNAADLGGAIYASSGALTLTATTLSGNTADNGGGLSLRAADTIITESTIADNVADDLGGGIDAINGTLILTATTVSGNEAGDDRGGGIYASTLVLTLDGATLSANKATTGAGLALEHATATITATISDNEGGTAGHGGGFFLLDSLVTLTESTLSGNTGGDGGGGFVSGGQLSVMGGTLAENEATRAGGGLYLSSGMATLDGATLDKNKAGSAGGGLYAHGGELTLSETTVSNNTSIGDGGGLAVGAAALTTISGGGIEFNTAGNVGGGLFHKDGTTTLTAARLSDNEAATGGGLALMAGLITGTGGVITGNQAGGDGGGAYVGGGALELDGTLFQANEAGGDGGGLALLAGLISGSGGALTGNHAIGDGGGAYVKGGALELDGTQLRGNQAGDAGGGLYSDGGQTTISGGSFNGNEAQAGGGLAVAEGAVNLAGVVLERNTTPGEGGAAWVDGGQLTIRDGWLWKNTAVGGGGLFIVGGQATLDRSLLSENTAGDGGGARVGQAGALLVVNSTLSGNSAAVDGGGLFTAGTTSLINATLSGNTAGVRGGGALAYGGTLTLQRSLLAGNSAPDGREARRMGGAVTVAAHNLFGFGGDAGLSGLSAGASDVTPVLALGGVLRPLAHNGGPTLSHAPAVGSPAIDGAPSADCAAAPVNGVDQRGLPRNVDGDGQASAAECDIGAVEAGPAEHFVYLAVVVP
>NZ_LN890656.1|WP_095045501.1|763911_764040_-|DUF433-domain-containing-protein
MSEKQHISADPAVMLGKPVVSGTRITVESILERLATGETFDI

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Crispr_ID: NZ_LN890656_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_9

932595-932835

Orphan

Consensus_repeat	Method
GCCAAATCTTCAAGCATTGGCTACGGATTACCACGGAAGAAACGGATTTATTTCTTTCCTACGG	PILER-CR

2 spacers

The CRISPR arrays of NZ_LN890656_9

>merge|NZ_LN890656|9|932595-932835|PILER-CR
TTGGCTACGGATTACCACGGAAGAAACGGATATACCACTGGTCTTTCCGTTCTTCACCCGTATCCTCCGTCTCAATCCGTAGCCAAATCTTCAAGCATTGGCTACGGATTACCACGGAGGAAACGGATTTATTTCTTTCCTACGGTTCTTAACCCGTAACCTCCGGTTCAATCCGTAGCCAAATCTTCAAGCATTGGCTACGGATTACCACGGAAGAAACGGATTTATTTCTTTCCTACGG

>NZ_LN890656|9|2|932595-932835|PILER-CR
TTGGCTACGGATTACCACGGAAGAAACGGATATACCACTGGTCTTTCCGTTCTTCACCCGTATC	CTCCGTCTCAATCCGTAGCCAAATCTTCAAGCATTGGCTACGGATTACCA
CGGAGGAAACGGATTTATTTCTTTCCTACGGTTCTTAACCCGTAACCTCCGGTTCAATCCGTAG	CCAAATCTTCAAGCATTGGCTACGGATTACCA
CGGAAGAAACGGATTTATTTCTTTCCTACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045615.1\|919298_919646_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|223734
NZ_LN890656.1\|WP_095045618.1\|921322_924316_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|226418
NZ_LN890656.1\|WP_095045630.1\|943305_943524_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045629.1\|941319_942981_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237030
NZ_LN890656.1\|WP_095045627.1\|940549_941080_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045614.1\|918256_919168_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|183067
NZ_LN890656.1\|WP_095045632.1\|945121_945394_-\|DUF433-domain-containing-protein	unknown	unknown	gnl\|CDD\|225291
NZ_LN890656.1\|WP_095045619.1\|924519_924759_+\|DUF4160-domain-containing-protein	unknown	unknown	gnl\|CDD\|379344
NZ_LN890656.1\|WP_095045624.1\|934935_936846_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045622.1\|931300_932521_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|273938
NZ_LN890656.1\|WP_157913384.1\|933109_934552_+\|serine-protease	unknown	unknown	gnl\|CDD\|238113
NZ_LN890656.1\|WP_095045633.1\|945672_946767_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376273
NZ_LN890656.1\|WP_095045631.1\|943558_944896_-\|transposase	unknown	unknown	gnl\|CDD\|379252
NZ_LN890656.1\|WP_095045617.1\|920735_921119_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319898
NZ_LN890656.1\|WP_095045620.1\|924718_924982_+\|DUF2442-domain-containing-protein	unknown	unknown	gnl\|CDD\|378424
NZ_LN890656.1\|WP_095045625.1\|937202_938018_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319911
NZ_LN890656.1\|WP_095045621.1\|925157_930986_-\|lamin-tail-domain-containing-protein	unknown	unknown	gnl\|CDD\|378045
NZ_LN890656.1\|WP_162292541.1\|917640_918150_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_095045626.1\|938199_939996_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_LN890656.1\|WP_095045616.1\|919997_920510_+\|fasciclin-domain-containing-protein	unknown	unknown	gnl\|CDD\|225214

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045615.1\|919298_919646_-\|cupin-domain-containing-protein	gnl\|CDD\|223734	COG0662, {ManC}, Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism].	2.5501e-13
NZ_LN890656.1\|WP_095045618.1\|921322_924316_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|226418	COG3903, COG3903, Predicted ATPase [General function prediction only].	3.94863e-51
NZ_LN890656.1\|WP_095045629.1\|941319_942981_-\|hypothetical-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	2.8827e-09
NZ_LN890656.1\|WP_095045614.1\|918256_919168_-\|DMT-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	3.29944e-21
NZ_LN890656.1\|WP_095045632.1\|945121_945394_-\|DUF433-domain-containing-protein	gnl\|CDD\|225291	COG2442, COG2442, Uncharacterized conserved protein [Function unknown].	7.83694e-18
NZ_LN890656.1\|WP_095045619.1\|924519_924759_+\|DUF4160-domain-containing-protein	gnl\|CDD\|379344	pfam13711, DUF4160, Domain of unknown function (DUF4160).	1.28651e-12
NZ_LN890656.1\|WP_095045622.1\|931300_932521_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.73517e-100
NZ_LN890656.1\|WP_157913384.1\|933109_934552_+\|serine-protease	gnl\|CDD\|238113	cd00190, Tryp_SPc, Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad residues.	5.5168e-101
NZ_LN890656.1\|WP_095045633.1\|945672_946767_-\|hypothetical-protein	gnl\|CDD\|376273	pfam18854, baeRF_family10, Bacterial archaeo-eukaryotic release factor family 10. Bacterial family of the archaeo-eukaryotic release factor superfamily. Likely to play roles in biological conflicts or regulation under stress conditions at the ribosome.	4.94716e-22
NZ_LN890656.1\|WP_095045631.1\|943558_944896_-\|transposase	gnl\|CDD\|379252	pfam13546, DDE_5, DDE superfamily endonuclease. This family of proteins are related to pfam00665 and are probably endonucleases of the DDE superfamily. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction.	3.66476e-29
NZ_LN890656.1\|WP_095045617.1\|920735_921119_+\|VOC-family-protein	gnl\|CDD\|319898	cd06587, VOC, vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases.	1.98396e-11
NZ_LN890656.1\|WP_095045620.1\|924718_924982_+\|DUF2442-domain-containing-protein	gnl\|CDD\|378424	pfam10387, DUF2442, Protein of unknown function (DUF2442). This family of bacterial and fungal proteins has several members annotated as being putative molybdopterin-guanine dinucleotide biosynthesis protein A; however this could not be verified. Hence the function is not known. This family also includes the DUF3532 that was found to be related and was merged into this family. Members of this family also fall into the NE0471 N-terminal domain-like superfamily, a family of proteins with a unique fold in SCOP:143880.	3.52909e-09
NZ_LN890656.1\|WP_095045625.1\|937202_938018_+\|VOC-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	1.5539e-34
NZ_LN890656.1\|WP_095045621.1\|925157_930986_-\|lamin-tail-domain-containing-protein	gnl\|CDD\|378045	pfam08757, CotH, CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.	3.58143e-56
NZ_LN890656.1\|WP_095045626.1\|938199_939996_-\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	6.52743e-10
NZ_LN890656.1\|WP_095045616.1\|919997_920510_+\|fasciclin-domain-containing-protein	gnl\|CDD\|225214	COG2335, COG2335, Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane].	1.33469e-27

>NZ_LN890656.1|WP_095045622.1|931300_932521_-|trypsin-like-peptidase-domain-containing-protein
MKHRLSTIFVLIALMAVLLTGCSLGRDASSVLPVVGTVAETIQQQLPTVAAQAEAAVQEVAQVAPTAAPEVVPVVPVPATTTEQQLIDLFNRVNPGVVTVYMTSGSGSGFIVDAGGYIVTNNHVIAEGGEITIVFYDGDVKTAELVGTDSQGDIALLKVEAAPGELTALPLGDSDALQVGQSVIAIGAPFGLSNSLTTGIVSGLNRQMPVEELGIATNYQVPNVVQTDAAINPGNSGGPLLTMSGEVIGVNTAIESPVRANSGVGFAVPSNVVKVIIGQLRTSGEVSYPWLGIAGGTLSPDAAEELGLPRETRGVLVSEVTTGGPAATAGLRGLDAATNSGADIITGIDSLTVVEFDDLLGYIVQNTQVGQTVTLTILRDGQPQTLSLTLGERPAAVPQSEFEQAP
>NZ_LN890656.1|WP_095045621.1|925157_930986_-|lamin-tail-domain-containing-protein
MTRSRRALFVVLLLFVCLAVFARGGRAQTPAILINEILVGNTGTTLDADYVNYSGWIELRNTTGSNINLNNYKLSFLPAGETVTLNGTVKTGLNLPANGRAIIWADEKNSGAHMLFQMDMDGGQLTLRNPSGALIDQVTFGAQSPDVSYGRTPDGGGAWAFYDQPTFGGANTSPAYANNNPSSFAARPQFSVPGGPRSGGTSVSLSSPDSGATIRYTTDGSRPKATSPLYSGPIAVNGSTVLRARAWVAGKMVSPTATQTYLVNIPTNLPIVSVVTDPPNLWDNYMGIYVRGSNGVADCRGTANWHRKWERPASIEFYEINGTPRVNQEVGLEISGNCTRNFPQKSLEIKPKKLYGDNDMDYAFFPGDKPMTSYSRLILRNGGNDNYHAYLRDSFAQTLARGRMDVDRQAYRPAVVYLNGQYWGLYELREKMDEDYVENNYGLEEDQFDFLEKNFRVMNGTDVAFRDFYNFIKAVNITQSAAYAQVRERMDVDEFMNYLIIETFSANTDWGRNNVRYWDDYGTAYRWRWAMHDLDFSFFVRNANKDMFAYGFSTGNPMGFIAKKLWDNTTYRYEFSQRYAAHLNTTLSAARINSLLDSMAAGIRPEMAAQTARWGKPANVAAWEAEVQELRTVALARVTNSRNHLRSRLGGNPDSTLTIDIVGDGKVLVAGAEVSDGYSGPHFRNIPINYLAIPGQGDDFSHWEVVGPGTTYNTAALSLPFTANLTLRAVFEAEPPPPAAPNLVINELHHTPVDDNAYEFLEIYNPGSTAVNLSGFTIFGVTFTFPAGSSIAPGEYIIVADTPANYTGHGYQVFDFDGGLSGSGETITIFDTFNQPSDSVSYGTAAPWPGNTNATNLSLSLLDPALDNTVATNWAASRQLGGSPGAVNFPPLPPVPPVVINEIHYNPASGSEFIELVNNGPDTVALAGFTFSGIDYTFPTGTNLAAGAYLVIAADNSGQPGWLEWTSGDLSDDGETVALLDGDNQTVDTVSYDDAAPWPAAPDGLGPSLALGRLALENSNPANWGASRQSGGTPGAVNFPPLPIVINEVHHSSPAPLNDDTYEYLELVNTGSGPIDLSGYTLFGVTFTFPAGSSIAAGEYIVVADTPSTYSGHGYQVFDFSGGLSGSGELLTVSDPFGNVADTVNYGVAAPWPTTTATGPSLSLLDPALDNTVATNWAASRQNGGSPGAVNFPPLPPVPAVVINEIHYNPASGAEFIELVNDGPDTVALAGFTLSGVEYTFPTGTNLAAGAYLVIAADNSGQPTWLQWTSGALHDDGETVALLDGYGQTVDTVTYDDGGDWPTEPDGSGPSLSLLDPALNNSNAANWAKSRQNGGSPGAVNFPPLPPVPAVVINEIHYNPASGAEFIELVNDGPDPVALDGFTLSGVEYTFPTGTNLAAGAYLVIAADNSGQPAWLQWTSGALHDDGETVALLDGYGQTVDTVAYDDGGDWPTEPDGSGPSLSLLDPALNNSNAANWAKSRQNGGSPGAVNFPPLPPVPAVVINEIHYNPASGAEFIELVNDGPDPVALDGFTLSGVEYTFPAGTNLAAGAYLVIAADNSGQPAWLQWTSGALHDDGETVALLDGYGQTVDTVAYDDDGDWPTEPDGSGPSLSLLDPALNNSNAANWAKSRQNGGSPGAVNFPPLPPVPAVVINEIHYNPASGSEFIELVNNGPDPVALDGFTLSGVEYTFPTGTNLAAGAYLVIAADNSGQPTWRQWTSGALDDDGETVALFDAYAQTVDSVAYDDDGDWPAGPDGSGPSLSLLDPAQNNSNPAHWAASDLVGGTPGAANFPALPVVINEIHYNPVITPTVGIEFIELVNSGAAAVVLGNFTLVGVEYTFPAGTTLAAGAYVVIAADATGQPTWRQWTSGDLADDGETLELLNSRGQTVDSVTYGDSGAWPTEPDGTGSSLALDDPALDNGDAGNWSPSNEAGGTPGAVNF
>NZ_LN890656.1|WP_095045620.1|924718_924982_+|DUF2442-domain-containing-protein
MTLLTRGENTSIAEVTGISAIGLWLVAADREYFVPFADYPDFLQATVAQIYRVENPSPTQLYWPDLDVDIDLNALQEPERFPLVFQR
>NZ_LN890656.1|WP_095045619.1|924519_924759_+|DUF4160-domain-containing-protein
MSPTILRQGSNRFFFNSREETRMHIHVMTPDGTAKFWLEPLVALADYYGLNRKELRQLEEIVRERQDDFINAWRKHFNS
>NZ_LN890656.1|WP_095045618.1|921322_924316_+|tetratricopeptide-repeat-protein
MALLTIHLLGTFRLLDGDRPLTTRHTPRLQALLAYLLLHRAAPVPRARLAVLFWPDTTDAQARTNLRNLLHALREALPPGDYLLADTQTIGWNPAAALRLDVADFEAACAAADPAGLQAAVAHYSGDLLPELYDDWVAAERDRLRALLADALQRLAARLEADGRHAEALTAAHRLLRLDPLHEEATVRLMRLNALAGDRAGVRRAYESLASVLRLEVGVEPAADTTAAYHHWLSAAPAPRRPAAARAALPLPADTLFGREPDVAAVAALVARHRLVTLTGYGGVGKTRLALAAAAAAQSDHFADGACWVDLAPLIAADAVIPAAVAALNAPEQAGRAPSVNLVDFLAARRLLLVLDNCEHVLVGAAALIEAVRRDCPGVHVLATSRVRLRLPGEHVYMVEPLALPGVAGGEWRVAGGEEQGAGGGLRVAGVVWGASAVAAVRENPSVQLFVDRAAAVWPTFALTPANAPAVAHICRRLEGIPLAIELAAGRVRLLSTRHIAERLDSAFDLLAAGPTQPRQHRTLRGVLDWSYDLLSADEKTVLRRLAVFAGSFSLAAAESVAGGDPLPPGATLELLAGLIDHSLVAGEEGDDERRYRLHEMTRQYALEQLAAAGEREVVMARLLAYVAALARRARDELRGEQQAVWLRRLDAKTATIEVALEWGSRAADDVAAADTLRVVAELYFYWTLRGRQPYATRLTERALAAAAGRDLPPDAPAQAHVTAAALSIIHTDPTAAADHLAAALADPAALDDAYTAVAHHVRGLVAYIARDHAAAEAIWRAALDATQTDWCRATLLDDLGNVYMRLDQPERALAVFQEERAIAARIGDRISRFYALTNLGIVLGRLGDPAPARAYAAEAVALARQMDSARLIAYALRNQARLALAGGDAPTAYRLLREATALAWEIRNRDLTLSALEQLALAAERLRPDARAVMLFAAVAAARESFRLPPHPADEAATTAARARLAAALPPAAFARAWDEGQRLDWVEVVALAEEE
>NZ_LN890656.1|WP_095045617.1|920735_921119_+|VOC-family-protein
MNAISMATGAVQHIVLPVGDLGRAADFYCRLLGFQPVTDYDTFMLLTNGHVTLTLRPRADGESPWGYTQFGLSLPGRTELEAAARLLADCGVPHQAIHHFADIGILVLSLRDPDDNRVDLIVPADKG
>NZ_LN890656.1|WP_095045616.1|919997_920510_+|fasciclin-domain-containing-protein
MKLNKAHRLFVVALTALLALAAVVPAFAGTKRQNIVEIAASNPDFSTLVAAVVKADLVDALDGPKRVTVFAPTNAAFDDLAGELGYANGMALVDALSAEQLTPILLYHVTNGNRSANTLFPPQSVRMLSGDRALTAIDNGMKTIDGQPIVATNIRASNGFIHVIGGVMLP
>NZ_LN890656.1|WP_095045615.1|919298_919646_-|cupin-domain-containing-protein
MVKIIKSAELELRPGGTVRFEGEAHGSGASFFHVRDIAGTGAARHVHPYPETWLVLAGRVRFTVGGQDSEAGPGDIVVAPAAVPHQFVSLGPAVLEMVCIHPSPRIVQEDLASGE
>NZ_LN890656.1|WP_095045614.1|918256_919168_-|DMT-family-transporter
MKPIHYLSLLLLGAVWGASFLFIGVAAPAFGPLTLMLVRVLVAGLLMLGVAVVTQGRPVGGTLQLRANWRIYLAIGLLNSALPFTLIAFSELRLPASLAAILNSTTPLFTALMAAAWGSEPLTGRKGLGVILGMAGVAVLVGGAPLTLDRAALLAVGASLLAALAYGTGTVYAARHITGLPAATASTVQLLAAAVWLVGPGVVAAPRTPPPGAAVAALAALILLSTTFAYLLYFFLLKNVGPTRTASVTFLVPVFGSVWAILFLNERFSLGMLAGLAIILVSVALVVGRGRERETTDFTDVTD
>NZ_LN890656.1|WP_162292541.1|917640_918150_+|hypothetical-protein
MTSPTQIQVNDLMQRGYVYILTEPEGANFAPDFRPELTPAELLALGVFGGRYMTDCAAEFPADWFAQARLSPGRRDPTLNYFGVNASQPLAVWRARGWLHPDDPRGWFQWYCRYFRGRRMADDARQIGRWRAYRRHLVQVERNCLPGDMTCRRRQRQSLLHWAYDARRI
>NZ_LN890656.1|WP_157913384.1|933109_934552_+|serine-protease
MNFPFRRSHALRAGILLLAVFLCATAAIAATAATAALAQTDPRIVGGQEATPGEWPWQVALVQSGGDTYLGQFCGGSLIAADWVLTAAHCVDNDAPGDIDVVAGIHDLTAPETGFRRVGLDEIIVHPGWSNSTKDNDIALLRLASPIAERAGGGGELPIRYATLPPAAIGALAGATTTVTGWGNRLPGGSDYPPRLHEVEVQVIANAACASAYSNLTDNMLCAGVDGGGKDSCQGDSGGPLVYNNSGEWQQVGIVSFGIGCAEADYPGVYARVSRYIDWIIPLVATDLAYVPVALYVPPAGPPPPPPDPLENGNFEQGAGVGWSEASSGGWPIVTNDFLTNVIDPIGVWAAWLGGANDEQSELWQQIVVDPATPVLRYTYAIGSADDCGFDRAQIVINSTAVVRQFDLCVANETDGWVQGTVDLAAYAGQSVELLFLLVNDETRNSNFFLDNVGFVAAAAAAEPAAPRAPSGDLAAPKSR
>NZ_LN890656.1|WP_095045624.1|934935_936846_+|hypothetical-protein
MNRVSTSIPWRRRAFLALLVMALLLIPSAALAQSAPPSSDGLEPGEHVTYEQEVPINVVFVGYEEGDLALGDMEAVLPAAYAPIVRYPAFYGLAGRDMGLNFTFDYSTYFADAAFEDDFFGYLADTGTPGPMTLFQSDYNAQVNNVLDVTDPVLYIDGPSAEWWLMDNAGRLGVDPAQGYTIFFINWYSRPDFQFHVYTKTDAPDPDTGYNFGEVRDSRKMIAWGGSHGRTWFYDLSAGPEAWTDNWNVDDPDLDGDGVEDYRMPPIWEYAAGGFRDPAALSEDLGLVARFVAINLLFTPSPLYDPLVSSPGPEGDKILHVEMFELDGNGRVQGTHYYNAPLAGELMSDFQPYYDWQSAVDLNPRAIAGVQRTLRIFSGRALLQGCWQNFGTPFAQMFCFFDRNYGRFVPAYGPQDYVAAQFAFHTTATRMGDQFGLLGFADDDWVTGTPSYVFTFGAREYRELGYGFTSTVVHEGGHHIGLSHPHDGYDAEMGLDYGPGGSLYFAWSGDEADSVMNYLGTTNLFGMFNQDSMNRYIFAGYLNWANMILADIVAHPDAASVQAYVDAAEAAAMLAQDAFWAWDYDAAAAHARTAYEQIGLAAMQLGISTDMVAPMRAITPTGAPPKEGDPIRFPNN
>NZ_LN890656.1|WP_095045625.1|937202_938018_+|VOC-family-protein
MKIVKKYPDGVFSWIDLTTTDIAAAQAFYAGLFGWEVDEQPVGDSGVNYTNFRLNGYTVAGGGQMMPDMLAAGVPSNWMPYVNTDDIEATAARATAAGGVVFMPPMAVMDAGSMAFLQDPSGAAFGLWQPGNHIGAQVVNQPNALVWNELQTRDTEAAGAFYKQVFGWGQRTNDGYTMWDQDGRVQCGGLPLDPAWGDAVPSNWLTYFMVEDVDATAARLGELGGTAVHGPVDIEGMGRMMVAQDPQGATFAVIRFNGPVDEPPGEVEEVG
>NZ_LN890656.1|WP_095045626.1|938199_939996_-|hypothetical-protein
MSRFRSPLRIVCACLLIVILTASSRLAAQPGAPGGEPTAAPPNGLIPVFYHRAHITGFTMPYMAQAVADPAHDRLYVSFSDGGYIDDGPTLNVFDTSQARRLMTLEDPELSVLALNRSGTRLVSITDYFGERGHLRFYDTATMTLVADVPLPCAPSTVTCSVSDMAYGPDDRLYWISYSDTVVNIFDPATGTSLGYFEAADGAAIARIAIAGDQLFVFEETNNNWTPHIRRYNIAATAPVAELSVPTHDGVYFGAVSPDGAYFFAASDNILYLYDGQTLQPAHTLLETSKFGFGIMGTTFSPDGRRAIVLAENPYNDLHSQLLTFDPATGAVINVGHLKHEKFATLTESRLAPLADGEIAVVLRESIEIFRPTSHAAAVPVTFNNTCSGGFIRDFFTDPTSGWPSGDNGNVAFGYDSETYMIRQRNADAWFAVGRGDRWVDGQRTAISTRVVDAEGLSGLVFGLNDDWSHFYTLEIAPSLGRWVVFEYLAGAGWNLLATGTDGHIAAVGGWNRVEIQQSSGDHEMHLFVNDTFLYRFTMPNVDGRIAISAGSFAPNFEARFDNYYFSGQNCPWNPPNRATGLEFSPPIARPPLEEFLP
>NZ_LN890656.1|WP_095045627.1|940549_941080_-|hypothetical-protein
MTDTIEVGHRYRNPAGEYEIMAIDGMWATVRYEDGMTKRHLLAALKIHWENNQAGAEAAALAAQKTAKAPRVRAPKAAAPFPIDETSGLIAAIVRAKSLVDDPYVTRQTIVEGLMADPRGLEIITTAHKALFYRTPEWIAGSMVDQFGKDISRKGSPVRDKFDRQQVDNVWAYRPR
>NZ_LN890656.1|WP_095045629.1|941319_942981_-|hypothetical-protein
MSRKGLSVFMLLSLLVVLAACRRGPDGGELPTSAATTAATAAATTGATSTVPTAAPATLTNSPTPSPTAIPATATAGPPTAVPPTATAIPPTAIPPTATRPPATPVPPTATPPYGPPPGGSARITFAPGATSATVQSTLVAGGDGDTWIIRVLVGQVISVQTLATPPGAINVMLMDMSGGVLAANPDTAGISVAAPATGDYQINLATPLAAPQIAYTMQVFVPPGSGLPPTRIQFAPGASVAQLNDSMVAGGDLNQYVLALAAGQNLSVAVFASVPAVTDIVISNSLGQRVAVGTDMSGLSITTSSAGDYFIDLTSGLNAPAFTYVLTVTAPPLGVPPTVPPAQPTRITFGPGQISAALDGSVVGGTPATQYVIRGQAGQTLLTALTDNPPGNVNIAVRDAAGNTLNFGRAPTELGTRLSATGDYLITLDTAGAAVNYRLTVTVPPLPGAATRIIFPIGATSTTVTGDLPFGGGANTWVIGAMAGQTMTASLVATTPGWLSVFVYSPAGDLIAVGRDPAGVVVPLSAGGDYTIVVFSDPAAGPISYSMVVTIP
>NZ_LN890656.1|WP_095045630.1|943305_943524_+|hypothetical-protein
MDLIAAADLGWQVIAAGGSTMSSSSYTLLSTTGQPVAGAASGADHTLLSGYWYGFQQFVWTVLLPVVMGSPP
>NZ_LN890656.1|WP_095045631.1|943558_944896_-|transposase
MNILALLQPLRPIVSQTTMRQMSVLMGAMLAMTGRVTMLGMARWTDKGGSYRSVQRFFQTTIPWIQVMWAFFRDHLHQAGDEYLLVGDECVVSKSGKETHGLGRFYAPLWGRPVSSVALFALSLVNPRERRSYPVMSEQVPSQEGVNREVKPRTRRKKAAAQSSAGRPGRPPGRRNSIKTEVTLTPELTRIQTMVKQFLAVVDQRLKLTYLVLDGHFGNNNALQMVRQCGLHLVSKLRHDAALYFPYQGDNKRCKYGAKVAYDNLPASCWQQTIIDDGVHTDIYQATLRHKAFAQPLNVVILLKTRPTTGAQARVLLFTSDLALNWSQVLEYYQLRFQIEFNFRDAKQYWGLEDFMNVKKTPVTNAINLSFLMVNVSQVLLQDLRREDPAVNVLDLKAHYRGHKYVAEVLKLLPQKPDPIFTEAIFDRISRLGRIHPPQPALCPS
>NZ_LN890656.1|WP_095045632.1|945121_945394_-|DUF433-domain-containing-protein
MTAATRHRYVVTDPAILSGEPIIEGTRTPVRAIVELWRQGLPAEEIPSHLPHLTPAQTFDALSYYSDHMEEINGYIERNAIPDHLISVSQ
>NZ_LN890656.1|WP_095045633.1|945672_946767_-|hypothetical-protein
MIQQLNDDLRDFAEYAAGHADEKYLSLYLLTDPGYAENQSQIPAWQVYLKNAVTDVEAGLDPTQTKQWKSVRLSDNDPNKEWARIRKRLDKYLTSYRPEGKTLALFISPGSEYSFELPVRLPNSVSFGKPRVQEFLWALDEYQQHMVILFAEDTARVLRVALGSTGGEMVVIGDDAKLRQLRKGGGHQHEGFRSDELDRRFVRQAAGEVDKYFLKNPDTERIILGGNVEIANAVLGSLHRAVQEKVVAVLPIPAASAAHEVAALIRDTAEAAEREYETALVDEVTAQAQARGRGAIGPVAVERALDRGAVRLLALPYPGEAETVEPLLLQAIRYGSRVEFLHGAAAERAAAAGGILAQLYYAMN

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Crispr_ID: NZ_LN890656_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890656_10

968765-968894

Orphan

Consensus_repeat	Method
TCGCAATCGCAATCGAAAAGCGAAGAATCGATAGCGATTGCGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890656_10

>merge|NZ_LN890656|10|968765-968894|CRISPRCasFinder
TCGCAATCGCAATCGAAAAGCGAAGAATCGATAGCGATTGCGATAGCGATAGCGATAGGGATCGTGGGGAGGGATCGTTGTCGCAATCGCAATCGTAATCGAAAAGCGAAGAATCGATAGCGATTGCGAT

>NZ_LN890656|10|8|968765-968894|CRISPRCasFinder
TCGCAATCGCAATCGAAAAGCGAAGAATCGATAGCGATTGCGAT	AGCGATAGCGATAGGGATCGTGGGGAGGGATCGTTGTCGCAA
TCGCAATCGTAATCGAAAAGCGAAGAATCGATAGCGATTGCGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890656.1\|WP_095045652.1\|973969_974674_+\|N-acyl-homoserine-lactonase-family-protein	unknown	unknown	gnl\|CDD\|293815
NZ_LN890656.1\|WP_095045647.1\|963180_965700_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223642
NZ_LN890656.1\|WP_095045645.1\|961598_962027_-\|CBS-domain-containing-protein	unknown	unknown	gnl\|CDD\|341391
NZ_LN890656.1\|WP_157913387.1\|969119_971696_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NZ_LN890656.1\|WP_095045648.1\|965663_965888_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890656.1\|WP_157913385.1\|955906_956527_-\|transposase	unknown	unknown	gnl\|CDD\|376616
NZ_LN890656.1\|WP_095045643.1\|958641_959670_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LN890656.1\|WP_095045651.1\|972391_973645_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|223587
NZ_LN890656.1\|WP_095045646.1\|962236_962977_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379293
NZ_LN890656.1\|WP_157913386.1\|966022_968734_+\|right-handed-parallel-beta-helix-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379079
NZ_LN890656.1\|WP_095045654.1\|977785_978160_+\|DUF2200-domain-containing-protein	unknown	unknown	gnl\|CDD\|337575
NZ_LN890656.1\|WP_095045642.1\|956820_958527_-\|restriction-endonuclease	unknown	unknown	gnl\|CDD\|225100
NZ_LN890656.1\|WP_095045653.1\|977056_977623_+\|dihydrofolate-reductase-family-protein	unknown	unknown	gnl\|CDD\|223340
NZ_LN890656.1\|WP_095042622.1\|975937_976744_+\|IS5-family-transposase	unknown	unknown	gnl\|CDD\|379129
NZ_LN890656.1\|WP_095045656.1\|978361_979585_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370821
NZ_LN890656.1\|WP_095045640.1\|954421_955411_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_LN890656.1\|WP_095045644.1\|959801_961505_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185053
NZ_LN890656.1\|WP_095045364.1\|974727_975717_-\|IS110-family-transposase	unknown	unknown	gnl\|CDD\|376773
NZ_LN890656.1\|WP_157913388.1\|979798_980986_-\|restriction-endonuclease-subunit-S	unknown	unknown	gnl\|CDD\|341145
NZ_LN890656.1\|WP_095045658.1\|980982_982470_-\|SAM-dependent-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|223363

Protein	Function_ID	Function_description	E-value
NZ_LN890656.1\|WP_095045652.1\|973969_974674_+\|N-acyl-homoserine-lactonase-family-protein	gnl\|CDD\|293815	cd07729, AHL_lactonase_MBL-fold, quorum-quenching N-acyl-homoserine lactonase, MBL-fold metallo-hydrolase domain. Acyl Homoserine Lactones (also known as AHLs) are signal molecules which coordinate gene expression in quorum sensing, in many Gram-negative bacteria. Quorum-quenching N-acyl-homoserine lactonase (also known as AHL lactonase, N-acyl-L-homoserine lactone hydrolase, EC 3.1.1.81) catalyzes the hydrolysis and opening of the homoserine lactone rings of AHLs, a reaction that can block quorum sensing. These enzymes belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.91292e-50
NZ_LN890656.1\|WP_095045647.1\|963180_965700_+\|hypothetical-protein	gnl\|CDD\|223642	COG0568, RpoD, DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) [Transcription].	4.92386e-13
NZ_LN890656.1\|WP_095045645.1\|961598_962027_-\|CBS-domain-containing-protein	gnl\|CDD\|341391	cd04623, CBS_pair_bac_euk, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes. The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).	1.67152e-59
NZ_LN890656.1\|WP_157913387.1\|969119_971696_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	1.60201e-05
NZ_LN890656.1\|WP_157913385.1\|955906_956527_-\|transposase	gnl\|CDD\|376616	pfam01797, Y1_Tnp, Transposase IS200 like. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS200 from E. coli.	1.11073e-07
NZ_LN890656.1\|WP_095045643.1\|958641_959670_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.19165e-09
NZ_LN890656.1\|WP_095045651.1\|972391_973645_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	1.51111e-145
NZ_LN890656.1\|WP_095045646.1\|962236_962977_+\|AAA-family-ATPase	gnl\|CDD\|379293	pfam13614, AAA_31, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	1.51769e-43
NZ_LN890656.1\|WP_157913386.1\|966022_968734_+\|right-handed-parallel-beta-helix-repeat-containing-protein	gnl\|CDD\|379079	pfam13229, Beta_helix, Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.	0.000180396
NZ_LN890656.1\|WP_095045654.1\|977785_978160_+\|DUF2200-domain-containing-protein	gnl\|CDD\|337575	pfam09966, DUF2200, Uncharacterized protein conserved in bacteria (DUF2200). This domain, found in various hypothetical bacterial proteins, has no known function.	3.45613e-73
NZ_LN890656.1\|WP_095045642.1\|956820_958527_-\|restriction-endonuclease	gnl\|CDD\|225100	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair].	1.71593e-26
NZ_LN890656.1\|WP_095045653.1\|977056_977623_+\|dihydrofolate-reductase-family-protein	gnl\|CDD\|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	2.29671e-13
NZ_LN890656.1\|WP_095042622.1\|975937_976744_+\|IS5-family-transposase	gnl\|CDD\|379129	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096).	1.1756e-19
NZ_LN890656.1\|WP_095045656.1\|978361_979585_-\|hypothetical-protein	gnl\|CDD\|370821	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component. Members of this family of bacterial proteins modify the specificity of mcrB restriction by expanding the range of modified sequences restricted.	1.01541e-52
NZ_LN890656.1\|WP_095045640.1\|954421_955411_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	1.54159e-26
NZ_LN890656.1\|WP_095045644.1\|959801_961505_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	1.18916e-86
NZ_LN890656.1\|WP_095045364.1\|974727_975717_-\|IS110-family-transposase	gnl\|CDD\|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	1.27743e-26
NZ_LN890656.1\|WP_157913388.1\|979798_980986_-\|restriction-endonuclease-subunit-S	gnl\|CDD\|341145	cd17256, RMtype1_S_EcoJA65PI-TRD1-CR1_like, Type I restriction-modification system specificity (S) subunit Target Recognition Domain-ConseRved domain (TRD-CR), similar to S.EcoJA65PI TRD1-CR1, S.Fco49512ORF2615P TRD1-CR1, and S.SonIV TRD2-CR2. Escherichia coli UCD_JA65_pb S subunit (S.EcoJA65PI) recognizes 5'... AGCANNNNNNTGA ... 3' while Shewanella oneidensis MR-1 S subunit (S.SonIV) recognizes 5'... TACNNNNNNGTNGT ... 3'. The recognition sequence of Flavobacterium columnare S subunit (S.Fco49512ORF2615P) is undetermined. The restriction-modification (RM) system S subunit consists of two variable target recognition domains (TRD1 and 2) and two conserved regions (CR1 and CR2) which separate the TRDs. The TRDs each bind to different specific sequences in the DNA. For example, S.EcoJA65PI TRD1 recognizes AGCA/TGCT and S.EcoJA65PI TRD2 recognizes TCA/TGA; S.SonIV TRD1 recognizes TAC/GTA and S.SonIV TRD2 recognizes ACNAC/GTNGT. RM systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one enzyme complex composed of one DNA specificity (S) subunit (this family), two modification (M) subunits and two restriction (R) subunits. This model contains both TRD1-CR1 and TRD2-CR2. It may also include TRD-CR-like sequence-recognition domains of various type II restriction enzymes and methyltransferases and type I DNA methyltransferases.	2.30531e-50
NZ_LN890656.1\|WP_095045658.1\|980982_982470_-\|SAM-dependent-DNA-methyltransferase	gnl\|CDD\|223363	COG0286, HsdM, Type I restriction-modification system methyltransferase subunit [Defense mechanisms].	1.80184e-68

>NZ_LN890656.1|WP_157913386.1|966022_968734_+|right-handed-parallel-beta-helix-repeat-containing-protein
MSTELNTGVGVNSAAERGWLAGLLLRRGDTLLPRLAFYYRKMAALPRPWRRQLRRKLAVTVSGAALLLALAGPVLPPALADADAPAATITVVNGEVAITNNNKCSLLEAIINARATTNGQMKADCTSGNINGPDTVSLPNGGDFVLTASHNSQFGPTGLPVITDDMTIEGHGSAIRRDETYTTPEFRIMAVDPGVNLTIRDTTISGGSSSYPYQGGGILNKGHLLIEGGTIRDNYGYWGGGIENEGNLVVIDSLITYNTSRFGGGVDNEGELVVSDSQFTHNSGEYGGGGVYSHAATTATITGSLIAENLAHYHNGGGILSSGILSIENSTVANNSAYAGGGIDATQATITGSQIIENNACNLSHQVYCLDGGGGMRVENLTLVNSTVADNTSYGGLEFAGWGGGPGGGIVINGTSTITGSTISGNRAISGYGDISDPGLPPGIGGGILIYDDVTIVNSTISGNEANYGGGILVAEGDVTLIHTTLTGNVAKYESYYNEEYYATYSASGLGGGLFVGGTFDYDASPTVSLSGSIFSGNTADTAGREIMGSASAITGNAFNVIGRNGNAGTSGFTPGATDIVPSAGLNAILSPLADNGGPTMTHALPQGSPALDRAPNASCTAAPVNGVDQRGEPRNQNGAGNASNNECDAGSFERQAGGGGGAAFLVSPSGSGTVGGVAFAPSDILKYDPAAGWSMYFDGSDVGITKNLSGFELLGNGDILMSFQARQTIPGVGSFMPQDIARFDPTTTGDNTAGAFQWALDGSTKGLSTSGEKIDALGLSAGSWAISTTGAATVPSGGGTLKAQDEDALLFDPGSGGWSAFFDGTPIPGLKAEDVNALWVDPTNGDLYISLLNAFNLSGVSGNGRDIVKLTNNGGGSYTPSLWWNGAAAGFPVNVDGVEILP
>NZ_LN890656.1|WP_095045648.1|965663_965888_+|hypothetical-protein
MEAAAVPAGEGLNPINVTFAVIAAVFWQLGMFVLYFTDWLEFADYTLPVCSPRSPRHLTLEIHSQIMINVTPNL
>NZ_LN890656.1|WP_095045647.1|963180_965700_+|hypothetical-protein
MGNELTAKGANALEREGALVQRFLTMTGDEETRVNEQAPVKSDDNFFTRLVAAAEATLDNWSLSILNARYGLFNRRSMTVDEIAIYSGLTAEMVRAHIDSALERLNEQGQREILEGRVDEPCARLVLYVRAAVRPEEEGATARLMTLTYKDLSHLEPLLDLPDLLALFTKEPDEQHLRSIMTRLQVLEALQSGVTITFQSEYGPAEEQEFSGLLAGVEWPPAPARLSLSEIRQFEPGLPDEETVVVQLFSSTKSNHRCQFTNSQVFNLLCHLEYNEQVVYYTERPLRVPNPFTDEGEPNFVEPSHLMALQDGRVVLIDMTPPGEVVFGLHSSRRLALRLYCMQHGYGLLVTDGRDTALSHSQWLLPSDRGFLVTLSMTTGLLTGEPAVNLGDLNLTHREMCGLVARENLFWLPGTHAVSTQPPGANRMGEVDDEDEAASEMEPDDTFTDNKVADGADNVRGSSQLMELLVNAVGLTLDEREGAIFMARFGLEDGQARTLSAVGDQFGITRERARQIIEKGFQRLTRAAKSARRRARYDEPCARLADYIRSAVNPDADDDAERLLALMRTELPQLRTLSVRDAAMLPARFLGDKETAADYAKRVRELLEAEQEVRRIEKEVARSDTRLAALLRDVLWPPEISVIAPGDFGTLVAARSVSPIMASETGAFVSGKLDRLVEYESALEHDFLQLLEGTGNVTFYQEQPFRVPYEDDGQVHHTYPDVFFVLGDGRGVVAEVAPNFEMAQKENWVKWHGLRMFCRERGYGLLITDGRRTFQSVSRHEVRLDIRHSLLAALDDGPMSWPEYQAWRDTSGITTGEFYAIVIRERLDWRLRPYRLARG
>NZ_LN890656.1|WP_095045646.1|962236_962977_+|AAA-family-ATPase
MRVFALYNIKGGVGKTAAAVNLAYLAARDGRSTLLWDLDPQGAASYCLQIDPKVKGGRKALLRGKSPVAKLIKPTAYDNLELLPSDFSYRNMDLELSDAKRPERRFRKLLEPLEEHYHTVFLDCPPGLTLTTESMFGAADTLLAPVIPAALSLRTLGLIEEFLAREELTRLRTLAFYSMVDRRKTLHRQLVDARHADPRFLFTTIPYASDVERMAERRAPVGEFAPRSAAAAAYESLWKEVEGRRT
>NZ_LN890656.1|WP_095045645.1|961598_962027_-|CBS-domain-containing-protein
MATVNQMLMSKGSEVYSIAPDATVLEALHLMAEKDIGALVVIDGDRLAGIFSERDYARKIALQGKSSRTTPIWAVMTDEVICVSPDLPADKCMVIMTDKRIRHLPVLADGRLVGIISIGDVVKSIMSEQQVLIRHLEDYILS
>NZ_LN890656.1|WP_095045644.1|959801_961505_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MSDYRDPTQPTAARVADLLGRLTLAEKIAQMTQPEKYSVTPDEVAALGMGSVLSGGGGNPKPNTPATWAAMVSEYDEAARRSRLGIPLLYGVDAVHGHNNVHGATIFPHTISLGAAGDPELARRVARATALETAATGVRWDFAPMVSVVQDPRWGRTYEAFGDDTAAVTALSRAYLLGLQDAGDGRGLASPHAVLGTPKHYLGDGATLWGTSKMEMLGLRFHIDQGDMRVDEATLRAKYLPPYAAAVEAGALCVMPSFSSWNGVKMHAHRYLLTDVLKGEMGLRGFLVSDWQAMDQIDPDYATAIATSINAGLDMNMVPYDWRRFIATLMAAIESGAVPLSRIDDAVGRILTVKFEMGLFEQRPGDLPPLSILGAAEHRALAREAAARGMVLLHNDGGALPIGGGPIFVAGEAADNIGLQCGGWTIKWQGEVTRDLTVGTTILDGLREVAPPDTAITYSPTADFPGDARAAVGLLFVHELPYAEGLGDREDLNLPAEQVALIDKLRARCERLVVVLITGRPLLIAEHLGRAEAWVAAWLPGSEGGAVADVLFGRVPFTGRLPLAWPG
>NZ_LN890656.1|WP_095045643.1|958641_959670_+|GNAT-family-N-acetyltransferase
MIPSPQPIVIPDAPPIPTLHFRHYRGPDDLPALAAVYAALADAGQLEYEVSVEWLANYFDHEVNLDPYADIALAEIDGQVAGLSRCYWAEEVAGPRQYQFNLLVTPAWQGRGISRALLHWAENRLRHTAATHPPEPPKLLQFWLPHGLARLRPLLESAGYTPARYSNNMVRPSLDDIPDFPLPPGLEVRPARPEHYRRIWDAQIEAFQDHWGFLQHPEEDYQMWLNDPIYFQPALWQVAWDVATDEVAGMVLTFIDAAENERWGRRRGYTEGISVRRPWRRRGLARALIAHSLRAQRDVGMTESALGVDSESLTGATRVYEDCGFLTVTVDMLYRKPLESSS
>NZ_LN890656.1|WP_095045642.1|956820_958527_-|restriction-endonuclease
MPAPITENTLFYGDNLPILREYVADASVDLVYLDPPFNSNRTYNVLFKPESGAEAEAQIAAFEDTWHWNRAAERTYREIIQNAPPHVSQLIDALHGFIGPSQMMAYLVMMAARLVELHRVLKPTGSLYLHCDPTASHYLKIVLDTIFGVQNFRNEITWKRSDAHNDAKKQYGMISDRILVYSRTKDALFTRQFGGFQERTLRDWYQYLEFPDGTIRRMNKEERESQKIPIGARRFNTSDLRSPNPRPNLMYEYKGYKPHRNGWAVSIEKMKELDQKGLLIFPSSQDGRIMRKRYLDEQSGAVVGDVWTDISQIRGADAELLGYPTQKPLALLERIISASSNPGDVVLDPFCGCGTTIAAAQKLGRRWIGIDITHLSIALQKYRLTQMFPDAAFRVIGEPTTESGARQLAHDDRYQFQWWALSLVRARPYGGEAGGKTGKKGADRGIDGLITFIDDHTNKAKRVIVQVKSGKVGSPAVRDLAGTLQREGAAIGVFLSLEPPTREMITEAAGAGDYDSPGWGTSHPRLQLLTVGDLLAGRARVDMPPSEMTFKAAGRVKEEGAGQRGLFD
>NZ_LN890656.1|WP_157913385.1|955906_956527_-|transposase
MTNHSSDTHHRRSIRLSGWDYRTQAYYFVTICTHQRANLFEDPSLADIAAIMWRLIPEQRHAHGVLVDEWVIMPNHMHGLILLPGPMNATDVAGDTAAIGPGLPFDLRYVTPSTGKTIPGERPRLVPGSLGAIIGNYKSGVTRRINTLRHSPGTRVWQRGYYDHIVRNQHELARIQTYIRDNPARWAEDRDNLDEILKRMTYHDGQ
>NZ_LN890656.1|WP_095045640.1|954421_955411_-|IS110-family-transposase
MSDTYSFLGIDIAKATFEAVLQVGPRQNSRGFDNDPAGFRALSRWLDKNGAGRVWAVQEATGRYGEALAHYLSQQGHAVSVVNPARIKAYGASKLRRAKTDRLDAALILDFGRTQRPALWTPPTAEQQELCALVRRVADVQHMHQQERNRLTAGSHPPIVQASLQAILAVLEAQIVALQKAIEAHLQAHPALRHTCQLLRSIPGIGLLTAVRLMVELPNIHAFDNPRQLVAHAGLAPSVCQSGTSVYGRGHTSRKGNAVLRAQLYMPALVALRHNPVIQAMQQRLQRAGKPKMVIVVAAMRKLLHLAFGVLKSGRPFDPAFALSPALGT
>NZ_LN890656.1|WP_157913387.1|969119_971696_+|right-handed-parallel-beta-helix-repeat-containing-protein
MSTELNTGVGVNSAAERGWLAGLLLRRGDTLLPRLAFYYRKMAALPRPWRRQLRRKLAVTVSGAALLLALAGPVLPPALADADAPAATITVVNGEVAITNNNKCSLMEAIINARAETNNQMKADCASGNINGPDTVSLPNGGDFVLTAPHNEQNGPTGLPVITTSMTIEGHGATIRRSTATYSHFRIMAVDPGATLTLRDTTIRDGWASPDYDDGPGGGILSRGNLVIENCTIADNYGYYKGGGIYAAGQLTITGSSVTNNWVWGSAAAGGGIFANGQTNITDSTIADNRASADDITAHGGGLYIGPDAQATISGSLINQNTASSHYDTAGAGIFVYGQATIVDSTIAENINSGNEGGGTGGGVYVTGQATISGSTIRDNVVHAFYEGYSYDLHPAYGGGLHNDGTTLVVNSTISGNTAGYGGGVVNTHEGNLTIWHTTITDNHAIQEVADYDEAGGSGGGLFSGPHYQGENCSATTLRGVIISGNTSDISAKQALFVPPTPGYCSASITVNAFNVFGQGGNAGLVGFTPGATDIVPSAGLNAILSPLADNGGPTMTHALPQGSPALDRAPNASCTAAPVNGVDQRGEPRNQNGAGNVTNNECDAGSFERQAGGGGGAAFLVSPSGSGTVGGVAFAPSDILKYDPAAGWSMYFDGSDVGITKNLSGFELLGNGDILMSFQARQTIPGVGSFMPQDIARFDPTTTGDNTAGAFQWALDGSTKGLSTSGEKIDALGLSDGLWAISTTGAATVPSGGGTLKAQDEDALLFDPGSGNWSAFFDGTPIPGLKAEDVNALWVDPTNGDLYISLLNAFNLSGVSGNGRDIVKLTNNGGGSYTPSLWWNGAAAGFPVNVDGLEILP
>NZ_LN890656.1|WP_095045651.1|972391_973645_+|DEAD/DEAH-box-helicase
MSDHQTAPGGSPFDAFNLDSRIRAGIVDAGYTIPTPIQEQAIPFVLEGRDVLGLAMTGTGKTAAFMLPILQRLTRGPLRRPRVLIVAPTRELAEQINETAAVLGRHTKIRSAAIYGGVGKGPQVAAIKRGTEILVACPGRLLDHIGAGDIDLSTIEVLVLDEADRMLDMGFLPDIKRILRYVPNREQTMLFSATMPADIRGLADAILRDPETVQVDVIAPAKTVSHALYPVPETLKSKLLHAMLEETRTSRVLVFTRTKHRAKRLAADLDKRGYRVAALQGNMTQNRRQEAMNGFKGGKYDILVATDIAARGIDVSEISHVVNYDMPDTVDAYTHRIGRTGRAAATGQAVTFAVQDDETMVRDIERVLGKPIERRRMEGFDYGAFAPESQRPAPKKSVYRSRSFHGAERGGLPAQRR
>NZ_LN890656.1|WP_095045652.1|973969_974674_+|N-acyl-homoserine-lactonase-family-protein
MTDNAVTRLYLMQVGSMPQYGIPIVCYLVQTADGGHILIDSGLPAIIPADAADFENGRDVIEQLAGLGLRPDDIDTVISTHYDGDHAGRHAAFTRAQYVVQRAHHADAATNPRYADIRAEWDQPLARIRLVDGDTTLRPGLTLIETSGHVPGHQSVLLRLPQTGAVLLTIDAVPFAAGFSRDLPDDGGDPDAAAVHASTIKLLDLVEREQIGLVIFGHDEAQWATLKQAPAFYE
>NZ_LN890656.1|WP_095045364.1|974727_975717_-|IS110-family-transposase
MSDTYSFLGIDIAKATFEAVLQVGPRQNSRGFDNDPADFRALSRWLDKNGAGRVWAVQEATGRYGEALAHYLSQQGHAVSVVNPARIKAYGASKLRRAKTDRLDAALILDFGRTQRPALWTPPTAEQQELCALVRRVADVQHMHQQERNRLTAGSHPPIVQASLQAILAVLEAQIVALQKAIEAHLQAHPALRHTCQLLRSIPGIGLLTAVRLMVELPNIHAFDNPRQLVAHAGLAPSVCQSGTSVYGRGHTSRKGNAVLRAQLYMPALVALRHNPVIQAMQQRLQRAGKPKMVIVVAAMRKLLHLAFGVLKSGRPFDPAFALSPALGT
>NZ_LN890656.1|WP_095042622.1|975937_976744_+|IS5-family-transposase
MARKAYPSDVSDEEWAFTVGYLTLMTEDAPQREYALREVFNGLRWLIRAGAPWRMMPNDLPPWAVVYQQTQRWLKAGVFESMAHDLRALLRLADGRKSQPTAAIMDSRTLQSTPESGARAGYDGAKRRKGSKVHMAVDTLGHLLTLHVTPANQQDRDQVGQLAQQIQAITEESVELVFVDQGYTGDEPAEVALAHGIRLEVVKLPEAKKGFVLLPRRWVVERSFGWAARFRRLARDYERLPDTLAGLHYLAFVILMLHRVVTLVSYSS
>NZ_LN890656.1|WP_095045653.1|977056_977623_+|dihydrofolate-reductase-family-protein
MRPLLYSINITLDGCFDHRVGIVDEALHRHAAENIARADALLFGRVTYEMMAAAWRAPAPPGAWPAWMAEWMIPFARTIDAAKKYVVSSTLDRVDWNAEIVRGDLGDAVRKLKAEPGNGLFVGGEKLALSLTELGLIDEYEFIVHPRLVGHGPTLFAGLTQVVDLELVDRIEFASGAVAMRYRNRVFS
>NZ_LN890656.1|WP_095045654.1|977785_978160_+|DUF2200-domain-containing-protein
MNQETPTKKHRIYTMPFARVYPEYVNKAERKGRTKAEVDEIIGWLMGYSQAELDAQLANQTDVETFVAQAPRLNPARAMIKGTVCGVRVEDIAEPTMREIRYLDKLIDELAKGKAMEKILRQEV
>NZ_LN890656.1|WP_095045656.1|978361_979585_-|hypothetical-protein
MMPSSTTTPEPRLIHLRESETLTAVPLSPTTAAALRATYRDGQLRVAPSWSPGGYDLSAGPYVGSIAIDGDPALRILIAPKVPIANLFYMLTYAHELPDFGDQLAPLTAGEALFDFIVRIFLGQVDDLVRRGIHRGYVDVEESGARLRGRLLLAQQVRRGPVAVGFQQRVNEFTADVLENRILRAALALLARARFGDADLGPRARRTLAAFAEVAPAAITPAECDGVVYTRLTERYRSPINLARLFLRYLSLEGRAGATPFATFLVPMYRLFELFVARLLAEAAATQPRYQVAAQAPIWLDEARRLAGRPDIVLRRDGRDTLVLDTKYKVYGDKPTPADVHQMVTYCHTLGVGRGLLVYPGDTPLTDDHVLRAGVRLEMRALSLNGSLADFRENCRRFVGEVLGSGG
>NZ_LN890656.1|WP_157913388.1|979798_980986_-|restriction-endonuclease-subunit-S
MSKFPIVPFAHLFERVERKVILEDTVTYQRIGVRWYGLGAFIRDSELGMNISRKQQWVVESGDVIYNKLFAWKGSFAIAGADVHGQIASDKFPTYRHDPEQLDLGYLRYYFQTPSIAKQAENLSKGAAAISKLTLNPPQFWDLTIPLPPLVEQQRIVARIEALAGKIAAARRLREEATTETHLLLENLIDTAFEEIHHPAYPLRHLTTKIGSGSTPRGGKEVYAESGVPLIRSLNVRMRTFQWDGIAFISDDVHQQMAGTQVEPNDVLLNITGASIGRVSCAPNVPTANVTQHVMIIRPTQTLNNRYLMYWLSRPSMQNSINEQQKGATRQAITKSQVAQFEIPLPPIDEQIKIVNQLDNYQSQIQLVQLEQTQTNQELDALLPAILDRAFKGAL
>NZ_LN890656.1|WP_095045658.1|980982_982470_-|SAM-dependent-DNA-methyltransferase
MTTTTSKSRLSSIIKSARDIMRKDAGLSGELDRLPQLSWLLFLKFLDDMERVRETEAAFGQAGHAAHDPVLEAPYRWRDWAADANYGLTGDELLAFVNGQLLPHLRQLRGSESRLVVRELFGEIDNRMRSGYLLRDVVNLIDGVHFTSQDEVFTLSHLYESMLAQMRDASGDSGEIYTPRPVVRLIVECVRPRLGQTVLDPAAGTGGFLAQAYDYLGAQKQRAEDERVLQEETLSGIEKKPLPYLLGMMNLMLHGLRNPRIRHGNALVRPLKDIGPKDRYDVIMTNPPFGGEEEAGIQLNFPEATRTAETALLFLQFIMRSLRPLGRVGMVVPNGTLFADGVAARIKAQLLADFNLHTIVRLPNGVFAPYTSIPTNLLFFDRTGPTTDIWYYEHPLPEGRKNYTKTKPLAYEEFAPLLAWWDDRQANDRAWRVAAADLIRRDERGNVVAVNLDQKNPNAAEDLAHMAPEELVESILTKEHEIVELLRSIRSELQS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LN890656_8	8.1\|748284\|39\|NZ_LN890656\|PILER-CR	748284-748322	39	NZ_LN890656.1	748472-748510	0	1.0
NZ_LN890656_9	9.2\|932773\|32\|NZ_LN890656\|PILER-CR	932773-932804	32	NZ_LN890656.1	932836-932867	0	1.0
NZ_LN890656_3	3.1\|404650\|60\|NZ_LN890656\|CRISPRCasFinder	404650-404709	60	NZ_LN890656.1	404607-404666	2	0.967

1. spacer 8.1|748284|39|NZ_LN890656|PILER-CR matches to position: 748472-748510, mismatch: 0, identity: 1.0

ctgcgcggaactggaagttccgcctacaccccttgccac	CRISPR spacer
ctgcgcggaactggaagttccgcctacaccccttgccac	Protospacer
***************************************

2. spacer 9.2|932773|32|NZ_LN890656|PILER-CR matches to position: 932836-932867, mismatch: 0, identity: 1.0

ttcttaacccgtaacctccggttcaatccgta	CRISPR spacer
ttcttaacccgtaacctccggttcaatccgta	Protospacer
********************************

3. spacer 3.1|404650|60|NZ_LN890656|CRISPRCasFinder matches to position: 404607-404666, mismatch: 2, identity: 0.967

cggaaccctctcctagcctctcccagggggagagggaccagagcggaaccctctcctagc	CRISPR spacer
cggaaccctctcctaacctctcccagggggagagggatcagagcggaaccctctcctagc	Protospacer
***************.*********************.**********************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

10894 : 18166

Bacillus_phage(66.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095044945.1\|10894_11587_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.1e-23	28.7
WP_095044946.1\|11593_13093_-	DUF4118 domain-containing protein	W8CYF6	Bacillus_phage	1.1e-16	24.1
WP_095044947.1\|13089_13587_-	hypothetical protein	NA	NA	NA	NA
WP_095044948.1\|13704_14487_+	nucleotidyltransferase domain-containing protein	A0A2D1GQQ2	Pseudomonas_phage	1.3e-32	38.5
WP_095044949.1\|14679_15405_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.0e-40	38.1
WP_162292525.1\|15394_16786_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	4.1e-26	30.8
WP_095044951.1\|17095_18166_+	PstS family phosphate ABC transporter substrate-binding protein	A0A1B1IWY0	uncultured_Mediterranean_phage	5.4e-18	28.6

DBSCAN-SWA_2

776923 : 806001

Acidianus_tailed_spindle_virus(33.33%)

protease,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095045513.1\|776923_777667_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_095045514.1\|777694_778246_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_095045515.1\|778319_778511_+	hypothetical protein	NA	NA	NA	NA
WP_095045516.1\|778813_779062_+	hypothetical protein	NA	NA	NA	NA
WP_095045517.1\|779404_780253_-	intradiol ring-cleavage dioxygenase	NA	NA	NA	NA
WP_157913370.1\|780442_781351_-	hypothetical protein	NA	NA	NA	NA
WP_162292539.1\|781354_785080_-	DUF4157 domain-containing protein	NA	NA	NA	NA
WP_162292540.1\|785057_785354_+	hypothetical protein	NA	NA	NA	NA
WP_157913371.1\|785317_787993_-	ATP-binding protein	A0A125SJ49	Acidianus_tailed_spindle_virus	1.9e-11	40.2
WP_095045520.1\|787989_790095_-	hypothetical protein	NA	NA	NA	NA
WP_095045521.1\|790094_791618_-	hypothetical protein	NA	NA	NA	NA
WP_095045522.1\|791626_793120_-	hypothetical protein	NA	NA	NA	NA
WP_095045523.1\|793127_794375_-	hypothetical protein	NA	NA	NA	NA
WP_157913372.1\|794403_795876_-	hypothetical protein	NA	NA	NA	NA
WP_102136619.1\|795894_798015_-	hypothetical protein	NA	NA	NA	NA
WP_095045526.1\|798022_799960_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_095045527.1\|799969_800359_-	GPW/gp25 family protein	A0A0F7LDQ1	Escherichia_phage	2.2e-06	30.5
WP_095045528.1\|800389_800779_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_095045529.1\|800795_801377_-\|plate	phage baseplate assembly protein V	NA	NA	NA	NA
WP_095045530.1\|801377_802511_-	phage late control D family protein	NA	NA	NA	NA
WP_095045531.1\|802507_803206_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_095045532.1\|803272_803470_-	hypothetical protein	NA	NA	NA	NA
WP_095045533.1\|803490_803931_-\|tail	phage tail protein	NA	NA	NA	NA
WP_095045534.1\|803923_805555_-\|tail	phage tail sheath subtilisin-like domain-containing protein	J9PVC2	Bacillus_phage	1.3e-39	27.8
WP_095045535.1\|805560_806001_-\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_3

925157 : 975717

uncultured_Mediterranean_phage(12.5%)

tail,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095045621.1\|925157_930986_-\|tail	lamin tail domain-containing protein	NA	NA	NA	NA
WP_095045622.1\|931300_932521_-	trypsin-like peptidase domain-containing protein	A0A1B1IT49	uncultured_Mediterranean_phage	5.6e-19	26.8
WP_157913384.1\|933109_934552_+\|protease	serine protease	Q6JPG5	Neodiprion_lecontei_nucleopolyhedrovirus	3.8e-27	34.1
WP_095045624.1\|934935_936846_+	hypothetical protein	NA	NA	NA	NA
WP_095045625.1\|937202_938018_+	VOC family protein	NA	NA	NA	NA
WP_095045626.1\|938199_939996_-	hypothetical protein	NA	NA	NA	NA
WP_095045627.1\|940549_941080_-	hypothetical protein	NA	NA	NA	NA
WP_095045629.1\|941319_942981_-	hypothetical protein	NA	NA	NA	NA
WP_095045630.1\|943305_943524_+	hypothetical protein	NA	NA	NA	NA
WP_095045631.1\|943558_944896_-\|transposase	transposase	A0A218MNH3	uncultured_virus	3.9e-18	29.4
WP_095045632.1\|945121_945394_-	DUF433 domain-containing protein	NA	NA	NA	NA
WP_095045633.1\|945672_946767_-	hypothetical protein	NA	NA	NA	NA
WP_095045634.1\|946989_947682_+	HAD family hydrolase	NA	NA	NA	NA
WP_095045635.1\|947841_949056_-	hypothetical protein	NA	NA	NA	NA
WP_095045636.1\|949240_951313_-	PD40 domain-containing protein	R9TGS6	Vibrio_phage	1.7e-23	34.6
WP_095045637.1\|951501_951873_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_095045638.1\|951865_952855_+	hypothetical protein	NA	NA	NA	NA
WP_095045639.1\|953356_954328_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA
WP_095045640.1\|954421_955411_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_157913385.1\|955906_956527_-\|transposase	transposase	NA	NA	NA	NA
WP_095045642.1\|956820_958527_-	restriction endonuclease	A0A2L1IZ21	Streptomyces_phage	9.8e-139	46.6
WP_095045643.1\|958641_959670_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_095045644.1\|959801_961505_+	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA
WP_095045645.1\|961598_962027_-	CBS domain-containing protein	A0A2I6B2H4	Macacine_betaherpesvirus	1.9e-06	28.2
WP_095045646.1\|962236_962977_+	AAA family ATPase	Q8JL10	Natrialba_phage	6.0e-08	26.8
WP_095045647.1\|963180_965700_+	hypothetical protein	NA	NA	NA	NA
WP_095045648.1\|965663_965888_+	hypothetical protein	NA	NA	NA	NA
WP_157913386.1\|966022_968734_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA
WP_157913387.1\|969119_971696_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA
WP_095045651.1\|972391_973645_+	DEAD/DEAH box helicase	A0A0N9Q9J4	Chrysochromulina_ericina_virus	1.3e-47	31.8
WP_095045652.1\|973969_974674_+	N-acyl homoserine lactonase family protein	NA	NA	NA	NA
WP_095045364.1\|974727_975717_-\|transposase	IS110 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_LN890656.1|WP_095045648.1|965663_965888_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_LN890656.1|WP_095045648.1|965663_965888_+|hypothetical-protein

965663_965888_+

74 aa aa

925157-975717

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_LN890656_9	Orphan	9.2\|932773\|32\|NZ_LN890656\|PILER-CR	932773-932804	32	932836-932867	0

1. spacer 9.2|932773|32|NZ_LN890656|PILER-CR matches to NZ_LN890656 position: 932836-932867, mismatch: 0

ttcttaacccgtaacctccggttcaatccgta	CRISPR spacer
ttcttaacccgtaacctccggttcaatccgta	Protospacer
********************************

2. NZ_LN890655

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_LN890655_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_1

51589-51690

Orphan

Consensus_repeat	Method
TTCTTCCTCCCCTCCCGCCGGGAGGGGTTGGGGGAGGG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_LN890655_1

>merge|NZ_LN890655|1|51589-51690|CRISPRCasFinder
TTCTTCCTCCCCTCCCGCCGGGAGGGGTTGGGGGAGGGCAACTTAACTCGAAGCCGCGCAACCCTTCTTCCTCCCCTCCCGCCGGGAGGGGCTGGGGGAGGG

>NZ_LN890655|1|1|51589-51690|CRISPRCasFinder
TTCTTCCTCCCCTCCCGCCGGGAGGGGTTGGGGGAGGG	CAACTTAACTCGAAGCCGCGCAACCC
TTCTTCCTCCCCTCCCGCCGGGAGGGGCTGGGGGAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095041595.1\|49103_49865_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|369777
NZ_LN890655.1\|WP_095044760.1\|47561_48902_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_LN890655.1\|WP_095041605.1\|59812_60745_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638
NZ_LN890655.1\|WP_095041589.1\|39473_40679_-\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|132846
NZ_LN890655.1\|WP_095041596.1\|49861_50224_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319909
NZ_LN890655.1\|WP_095041598.1\|51746_52250_+\|DUF456-domain-containing-protein	unknown	unknown	gnl\|CDD\|377293
NZ_LN890655.1\|WP_095041591.1\|42144_43266_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173812
NZ_LN890655.1\|WP_095041600.1\|52660_55966_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|274368
NZ_LN890655.1\|WP_095041592.1\|43698_44898_+\|ornithine--oxo-acid-transaminase	unknown	unknown	gnl\|CDD\|179736
NZ_LN890655.1\|WP_095041593.1\|44894_46148_+\|valine--pyruvate-transaminase	unknown	unknown	gnl\|CDD\|236517
NZ_LN890655.1\|WP_095041590.1\|40711_42133_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_157912772.1\|50301_51582_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_157912774.1\|60758_61376_-\|signal-peptidase-II	unknown	unknown	gnl\|CDD\|376504
NZ_LN890655.1\|WP_095041604.1\|58816_59821_+\|M20/M25/M40-family-metallo-hydrolase	unknown	unknown	gnl\|CDD\|349906
NZ_LN890655.1\|WP_095041599.1\|52277_52667_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095041603.1\|57742_58786_+\|M42-family-metallopeptidase	unknown	unknown	gnl\|CDD\|349906
NZ_LN890655.1\|WP_095041607.1\|61417_62086_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NZ_LN890655.1\|WP_095041594.1\|46411_47482_-\|winged-helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|238042
NZ_LN890655.1\|WP_095041602.1\|56615_57746_+\|M42-family-peptidase	unknown	unknown	gnl\|CDD\|349906
NZ_LN890655.1\|WP_157912773.1\|56097_56589_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226406

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095041595.1\|49103_49865_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	3.7586e-14
NZ_LN890655.1\|WP_095044760.1\|47561_48902_-\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.78041e-47
NZ_LN890655.1\|WP_095041605.1\|59812_60745_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	8.75788e-116
NZ_LN890655.1\|WP_095041591.1\|42144_43266_-\|S8-family-serine-peptidase	gnl\|CDD\|173812	cd07487, Peptidases_S8_1, Peptidase S8 family domain, uncharacterized subfamily 1. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	1.23848e-42
NZ_LN890655.1\|WP_095041596.1\|49861_50224_-\|VOC-family-protein	gnl\|CDD\|319909	cd07245, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	4.81036e-26
NZ_LN890655.1\|WP_095041598.1\|51746_52250_+\|DUF456-domain-containing-protein	gnl\|CDD\|377293	pfam04306, DUF456, Protein of unknown function (DUF456). This family is a putative membrane protein that contains glycine zipper motifs.	4.41096e-13
NZ_LN890655.1\|WP_095041589.1\|39473_40679_-\|patatin-like-phospholipase-family-protein	gnl\|CDD\|132846	cd07207, Pat_ExoU_VipD_like, ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomonas. Even though VipD shows high sequence similarity with several functional regions of ExoU (e.g. oxyanion hole, active site serine, active site aspartate), it has been shown to have no phospholipase activity. This family includes ExoU from Pseudomonas aeruginosa and VipD of Legionella pneumophila.	1.29636e-37
NZ_LN890655.1\|WP_095041600.1\|52660_55966_-\|PAS-domain-S-box-protein	gnl\|CDD\|274368	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR. Members of this protein family are the regulatory histidine kinase PhoR associated with the phosphate ABC transporter in most Proteobacteria. Related proteins from Gram-positive organisms are not included in this model. The phoR gene usually is adjacent to the response regulator phoB gene (TIGR02154). [Signal transduction, Two-component systems].	1.83674e-57
NZ_LN890655.1\|WP_095041592.1\|43698_44898_+\|ornithine--oxo-acid-transaminase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_LN890655.1\|WP_095041593.1\|44894_46148_+\|valine--pyruvate-transaminase	gnl\|CDD\|236517	PRK09440, avtA, valine--pyruvate transaminase; Provisional.	0
NZ_LN890655.1\|WP_095041603.1\|57742_58786_+\|M42-family-metallopeptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	6.32078e-124
NZ_LN890655.1\|WP_157912774.1\|60758_61376_-\|signal-peptidase-II	gnl\|CDD\|376504	pfam01252, Peptidase_A8, Signal peptidase (SPase) II.	1.50595e-43
NZ_LN890655.1\|WP_095041604.1\|58816_59821_+\|M20/M25/M40-family-metallo-hydrolase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	4.57104e-122
NZ_LN890655.1\|WP_095041607.1\|61417_62086_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	3.6597e-20
NZ_LN890655.1\|WP_095041594.1\|46411_47482_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	3.0586e-14
NZ_LN890655.1\|WP_095041602.1\|56615_57746_+\|M42-family-peptidase	gnl\|CDD\|349906	cd05656, M42_Frv, M42 Peptidase, endoglucanases. Peptidase M42 family, Frv (Frv Operon Protein; Endo-1 4-Beta-Glucanase; Cellulase Protein; Endoglucanase; Endo-1 4-Beta-Glucanase Homolog; Glucanase; EC. 3.2.1.4) subfamily. Frv is a co-catalytic metallopeptidase, found in archaea and bacteria, including Pyrococcus horikoshii tetrahedral shaped phTET1 (DAPPh1; FrvX; PhDAP aminopeptidase; PhTET aminopeptidase; deblocking aminopeptidase), phTET2 (DAPPh2) and phTET3 (DAPPh3), Haloarcula marismortui TET (HmTET) as well as Bacillus subtilis YsdC. All of these exhibit aminopeptidase and deblocking activities. The HmTET is a broad substrate aminopeptidase capable of degrading large peptides. PhTET2, which shares 24% identity with HmTET, is a cobalt-activated peptidase and possibly a deblocking aminopeptidase, assembled as a 12-subunit tetrahedral dodecamer, while PhTET1 can be alternatively assembled as a tetrahedral dodecamer or as an octahedral tetracosameric structure. The active site in such a self-compartmentalized complex is located on the inside such that substrate sizes are limited, indicating function as possible peptide scavengers. PhTET2 cleaves polypeptides by a nonprocessive mechanism, preferring N-terminal hydrophobic or uncharged polar amino acids. Streptococcus pneumoniae PepA (SpPepA) also forms dodecamer with tetrahedral architecture, and exhibits selective substrate specificity to acidic amino acids with the preference to glutamic acid, with the substrate binding S1 pocket containing an Arg allows electrostatic interactions with the N-terminal acidic residue in the substrate. The YsdC gene is conserved in a number of thermophiles, archaea and pathogenic bacterial species; the closest structural homolog is Thermotoga maritima FrwX (34% identity), which is annotated as either a cellulase or an endoglucanase, and is possibly involved in polysaccharide biosynthesis or degradation.	1.04056e-103
NZ_LN890655.1\|WP_157912773.1\|56097_56589_+\|hypothetical-protein	gnl\|CDD\|226406	COG3889, COG3889, Predicted solute binding protein [General function prediction only].	8.96393e-07

>NZ_LN890655.1|WP_157912772.1|50301_51582_+|hypothetical-protein
MEPLPVDIFQLQRRDPAAWSALLARVPETEDIIVTAVTSEPLYVTTPAPPRRATADCAHRLRRYILTLDGCSDPISFIAKQTNTTEALFYQLFGDPPGTAIPACHYAHLDGDSSWVVIDDVPDHYPSAGWMPDQVDAVIATLARAHAARWNQDAADLNHGWGVAEPIIPHFLRRPGGAYTWHELRRSEATLFDEGPAAALSRHAVQNAGRLAPLLLRAANGLVVMRDLGGWPGVLGESHLAAAAELLDDPVPMLAPLLDLPTTLLHGAPHPGHWRSTLFDEHYLVDWSESQIGPGVLDLVAFLEGFPLLHDEAADLHHLRLREMTPLLEETLVDTYLLTLSAELGPRSPSRAFRAALPAARCLHVLLTWFPYFAAWAADMPDRYTWQRVNRLDESELHHYHNAPAAGLRRYLAGVFDRFLRASHSL
>NZ_LN890655.1|WP_095041596.1|49861_50224_-|VOC-family-protein
MINGIHHVQITIAPLDEAAARAFYCDVLGLAEIEKPDSLKVRGGFWVQVGDRQLHVGTEEGVDRARTKAHIAYQVDDLAQWRERLAAAGVMALESIPIPGHDRFECRDPFGNRLEFIQAL
>NZ_LN890655.1|WP_095041595.1|49103_49865_-|class-I-SAM-dependent-methyltransferase
MSDMDPTQRFSARADNYARYRPGYPADVVACLRDECGLTPQWFVADVGSGTGILTRLFLDNGNPVFAVEPNEAMRRAAERELADYAGFVSVNGQAEATTLAAHSVDLVAAGQAFHWFDGPASRVEFGRILRPGGIVALVWNARAYEGDPLMAAYEGVLAAHGLGYHAVNHRSHAGDLTALFTNGHTFRAFSHARYIDFATLWGGFLSASYAPLPGDARYEPMHDALRAAFDAHQRDGQVAFRYDTHLYFGRLD
>NZ_LN890655.1|WP_095044760.1|47561_48902_-|MFS-transporter
MRGFTVIWFGQLVSMLGTGMTNFALSFYIFQKTGQATALTIAIFCFVAPSIILSPLAGALVDRSNRKLVIILTDLAAGFVTLAWLVILATSGDLELWQIYLGNIITGAFNSLQFPAFSAAVSLMIPKAQFSRAAGMLDFAGAASNILAPAFAGALLGPIGLVGIMLIDVVTFVVAIVGVAIVRMPQPEPEEIPAGGQRPSLWQDSLYGFRYIRQRPSLLGLQFAFTALNFISAFGAIIATPMILARTANNAGSLAVVESIAAFGGVAGGLLMSTWGGPKRKVKGVLLGMSAESILGPVVIGLSRAVPGWAIGSFLSQFFIPIINGSNQAIWQSKVPPAVQGRVFATRRMIAQISFPVAVLFAGPLADRVFEPVMNSGGVFAALFGPLVGTGAGAGMSLMVLFSGLLGIAVGLIGYSIPAVRNVETILPDFDATPVVPAATAAEAAP
>NZ_LN890655.1|WP_095041594.1|46411_47482_-|winged-helix-turn-helix-transcriptional-regulator
MNRLSKQRIEWDIGTAYDFFISLWVLHEPEHMGLRGSWAAGVRSRLPGPERELLQRVVPLVWPLAWVYTLPRPKDVAVLLAALRQQSGMERLLTQLPNVPPPIVEMWRDVAARGSWNEVDQKVMVTEMQTGDWRKQPTATVRKAAADFLDLWTDPVGTADGLLSAYECYNEVFFAEEEGRIRPALEMALGRGQQMAQAITRWDALLEELSQGVRIMKDWEAKTLTLIPSYWGTPLALMADCGQERMLFLYGARPADQSLIPGDLVPDALYQALKALADPTRLRILRYLTGEPLTPAELARRLRLRPPTVIHHLDALRLARLVIVTLDAEGKRYTIRQDAVAAVCELLDQFLVGGED
>NZ_LN890655.1|WP_095041593.1|44894_46148_+|valine--pyruvate-transaminase
MRYSEFGQKFARECGILQLMDDLGNALAAGGDDLIMLGGGNPSRIPEVEVCLRERMTSGLTQGDAFERLVGNYAAPAGDIAFRQAVAQLLSAEFGWPITAANIALTNGSQTAFFYLFNMFAGEYAGGARKKILLPLAPEYIGYADAGIIDDLFIAYRPEIEHLDNRLFKYRVDFDALRVTDEVGAICVSRPTNPTGNVLTDEEIAHLHRLAVEADIPLIIDNAYGLPFPGIVYSEARPVWDEHVVLCLSLSKLGLPGARTGIVVANERIAAAMAGANAILSLAPGNFGAFMALELMRSGDVLRLSREVIRPHYRRKVEAALDAIHTEMAGLNYYVHKPEGAFFLWLWFEGLPITSAELYERLKRRGVLVVPGHYFFPGLPGEWRHRNECLRMSYAGDEAVVRRGIQIIADEVRACRG
>NZ_LN890655.1|WP_095041592.1|43698_44898_+|ornithine--oxo-acid-transaminase
MNSQQYIALDESYVAHTYNPIEVVIERGEGAWVYDVEGKRYFDCLSAYSAVNQGHCHPRILEAAVSQMHRVTLTSRAFFNDQMGLFLKQLCELTGYEMALPMNTGAEAVETAIKAARMWGYRMKGVAHDQAEIIVCEGNFAGRTTTLISFSSEEQYKEDFGPLTPGFKTIPYGDHEALAEAITPNTVAFLVEPIQGEGGVIVPPAGYLKHVAEICAANNVLFIADEIQTGLGRTGALLCCDHEGVRPDMVTLGKALSGGVYPVSAVLADRRVLGLFRPGDHGSTFGGNPLASAIARAALDVLVDEGLVDRSREIGAYFMGRLKRIESDHIEEVRGKGLLIGVEMSSLARPYCDSLRDAGILCKDTHGTIVRFAPPLVISKEEIDWAMERIEPILSNGHQ
>NZ_LN890655.1|WP_095041591.1|42144_43266_-|S8-family-serine-peptidase
MSNAQMPSEIDPVERPRQFDRPLFPHLPEVDSFLWVSQARAAFNVSGAGQTVAVLDTGLNTGHVDFAGRVVAQANFTPDNGGNPNDAGDGNGHGTNVGGIIVANGDHKGIAPGANIVPIKVLGNTGGGSFAWIRDALTWVRDNGPAHGVSAVCMSLGDSGNYISDTDYAADAVRGLIVELRAQRVAVVIAAGNGFFQHNSAQGMSYPAILRECISVGAVYDAAEGGFAYGSGATAHSSRPGQITPFSQRLHKSINRLTQTDIFAPGAPVTSSGINGPNGESVQHGTSQATPVTVGVILLMQEFHRRLTGELPEVGDLLAWLIRGGVPIIDGDDEDDNVQHTNLSFVRLDALSALDATRRAIQKRLLLEAQPIG
>NZ_LN890655.1|WP_095041590.1|40711_42133_-|hypothetical-protein
MAGKNADSTLLYFNGIDGATGGYALPPMSRNQLARYVLREPPADNLESLLAWESGALEGLGDPLDLSEPATAGWGVVFAADADPAIEAALAPLLDLRREQAGDLFHLFNGPNGVQRGESTADWLERQGTSPGPIRPEMVPYYLLLVGSPEEISFRFQTELDVAYAVGRIHFDSVAAYADYAASVARSETATAPRPRRLAFFGAINGDDPATNHTTTTLIDALAAALPTRAAGWEVATTRGPAATKAALSDLLGGPDAPAVLFCAGHGNVLPRDHPDQRRRQGALVTSDWPGPNEWAGRGPIPADCLMSGEDLAESADLTGQIAFFYACYGGGTPLRDEFAHLTFGNRPVQIAAAPFVADLPRRMLGRPGGAAAVVSHVERVWNCSYEWRGAGAQTAVFEQALARLMAGGRVGYAFDEFSRRYAHLAVLLNNLIEARHYGEPFDEDDLIFNWTANNDARGYVIIGDPAARIHQT
>NZ_LN890655.1|WP_095041589.1|39473_40679_-|patatin-like-phospholipase-family-protein
MQYDLVLEGGGAKGMAFVGAMREFEAAGHTIGRIIGSSAGAITAVSLAAGYTAAEMQATLSERAGDEPVFTTFLGTPPAPPEPAESALAEFFRAMDLSGLPEWAEGRLEKRLLGTLAGNATGRQLLSFFDYGGFYSADAFVSWLERKLNEGQFRGRRRNFGQATFAELYEATGVELSLTTSDTTMNRLHILNHRTTPRLPAVWGARMSMSFPLLWQEVVWREEWGMLHATRDGRPVQIPLTGNVMVDGGMLSNFPIELFVSREPGVTSVMGSETSTAVLGFLIDESLPVKDAPPPAAGSPLSSRLGSLRTAQRLRGLVDTLTSARDKAVIDENTRRVVRLPAKTYGTIEFGMSDARRDALVNAAAAATRDYFARHTGGLEALDDGPTAESDRIATNLLNYE
>NZ_LN890655.1|WP_095041598.1|51746_52250_+|DUF456-domain-containing-protein
MENIGYALGGGLVILAFIIGLFGVFLPILPGLIIIWLAALFYAAFVVGFDVFSPWVFVLITLIGLVAGTANFWLSALGAKTTGASWRTLIVGFIGAIAGTFFIPIPLLGTILGYAGGLILAEYVRLREWRPALKAAVGGVVGWGVSTGVELIGALLMILLVVTQVPR
>NZ_LN890655.1|WP_095041599.1|52277_52667_+|hypothetical-protein
MEQFLQDFVLVLLSVMSVALIIAIILLAIIIVQVRRIHVPPDAGFAETLLYTPFLVVLFLDVLDLALDFLSAPIAWIVLDRLGLKGLRGFATVESFIPFTQPIPTMTLAWIGVRLFGRDRFIERDYIDQ
>NZ_LN890655.1|WP_095041600.1|52660_55966_-|PAS-domain-S-box-protein
MPNDFWGTVGSPGLSLSGEPLAVGLLGLAAGLLAWAFVSGNPRRVFRDMNRGQWALFVALAVASFLLSQLFPVYLPWANPLLRAHPTTTALALLSAAPYLLAGVALNVPAALVIGLLAGLGRALGQTGAPVDLVAVALAAGASALLMRQNYAGRFFAGLRRPPVAGALGRLILPLFTALAILAGAMPTAGFYGAFDLALFFGLWSVLPALGEGLVGGGITSAVLWIAPQWRPDRGLLPSPLQRSLQRQLVAAFLTFAAVVVLLSAGVAFYFAARGAERALAEQMRLAVSAGAAGVATRQSDLSAALARYGADPALAAADPAAKSAALGRWQADTGFQSIRLVDETGAVVTGAGGDLAGELSAAERQLVAAAFNSGSARWGSAEMAGGTPAIRVVVPTGAGGPSGAALLAGVDPVVLGEALAAVPASETGGQGLIVDAAGRVLLPGSAVGQWSAPASEQRSGRLSAAGGDIYIALDPATGARQLVAYSAVPGSGWKVVAIVPHAAILRRALAIIGPLALLLLAVSSLFYGLVAALGRDISRPLAEMSRASRAIAGGGGLERPVRSEREDEVGQLTLAFSQMQRALRQRLDELSLLLSVSNDVAATVHIDEGMTAVLQGVLRGTGAAGARAVVRNPNAPAPLIFAEGPAAGSLSALDRPLLLRLRSVDELAYGSADEIAAGLAVDAGPAAALFALPLRPGGVFEGVLYLAYRQPHYFDSDERGLLRTLAGQATVLVQNAHLFAAAEGGRRRLAAILASTTNGVIVTDPTDRVLLVNPAVERAFGLRATAVTGRPVIDALAAAEPSGALAGRLSLSQSGAGNPGDGKVELEVGGRSYLAGISTVYSSKGRTMGRVAVLQDVSDIREVERMKSDFVAGISHDLLSPLTYMHNYAAMLPVVDDDALAGEYAEKIMAGIERMKRLVNDLLDLARIEAGLNLQFDRVQVAEVLAEVAQEYASPAHVAGVRLMVAAPADLPLVVADPMLLRRAITNLVTNGLKYAPQSGPLMLEATQDGDEIVIRVADHGPGIDAAEQAHLFEKFYRGQGAGTGYRAGDRAGGAGLGLAIVKSVADHHGGRVWCESAPGTGSAFYLALPIRGAEPDRVY
>NZ_LN890655.1|WP_157912773.1|56097_56589_+|hypothetical-protein
MDTRRRTYAILVGIILLTVPCYLSGIVLLARAPNRGGATPTPTEAVTASPTPTDEPTRPPPAVVSLTPPGSPTPEATVTASVTPTPTDTATATATTTATTTATPTNTATATPTPTDTATATPTPTDTATLTITPTETPTDTVTPTLEVTDDDLTGTPTLTPTP
>NZ_LN890655.1|WP_095041602.1|56615_57746_+|M42-family-peptidase
MDTFARLKQFTEAPGPTGDERGIAAAVAEVWRPLVDEIVADRVGSLLGIKRGAGEAGATRPAILLAAHQDELGLMVSRIVEHNGYGFLRVTELGGVDRRHLLGQTAVVHGKRQLTGVLGGLPDHLLPEKERGQAYSWDTLVLDLGLPIEQVRQLVSVGDFVTFRQPLRQLLNDRAAGKALDNRASVTAVTICLEQLQQRRHTWDVIAVATAQEEETFLGAYTSAHARRPDAAVAIDVTHAKGPGTSDSELAELGGGPVLGIGANVHPGLFRALQDAAKALEMTVGVESHAYGSGTDAYAIQVAREGIPTGLVSIPLRYMHTMVETADMADIERVGRLLAEMIARLDDSFLTGIVDELMKPDKPAKNGENGKKDDRA
>NZ_LN890655.1|WP_095041603.1|57742_58786_+|M42-family-metallopeptidase
MNDLLRQLTEAVGVAGAEKEVRLLIRDLIADHVDEWRVDTMGNLLATKRGTGQYDLRVLVDAHMDEVGLLITDIDSGGMLKFTNAGGFDDRALLGKVVQVGPQKITGVIGARAIHLLKRNEYSKVVKMDAMRIDIGAKNKDAAGAKVKIGDYAAFVTNYEELDGSRTAIGKAFDNRAGCAALVELLRGEPFPFDLVAAFTVQEEVGLRGARVASYAVKPDAALVLECTPAYDLPNDKDVSPNVAMGRGVSVYVMDARTIQDPKLVAHLMATADAKAIPYQVRQPGGGGTNTGAIQRAGAGLPTATLAVPGRYAHTPTMMINLDDYENLVRLADAALRGLTPDIIRRA
>NZ_LN890655.1|WP_095041604.1|58816_59821_+|M20/M25/M40-family-metallo-hydrolase
MNDLIRSLVEAYGPSGFEDRVRDLIRPLVEPHADEVTVDALGNLIVHRRPATDAANPLKVMIAAHMDEIGVMVTHVTEKGFLRFTNIGGVGSHTLLGGRVRFANGTVGVIGCDRLDDANTIHPLNKHFIDVGATGRDDCPVRVGDAAHFDRPFEARGQHLTAKSMDDRIGCAIAIEALRRLSAGSHDLYFVFSVQEEVGTRGAEAAANGIMPDVSIALDVTRTGDVPESRPMDVRLGAGPAIKVKDSGMIAHPGLVRLMRRRAEEAGIPYQLEVLEGGTTDARPMQLAGAGSAAGCISIPTRYIHSPSETLDAGDVAQCVDLLVAILSGEMDLA
>NZ_LN890655.1|WP_095041605.1|59812_60745_-|RluA-family-pseudouridine-synthase
MSLYNREIEVTLDAVGERLDKALTDTLPELSRMQWQKLIREGHVMIDGERAKPSYRIVGGETLRAAIPEVVEPEIAAEDIPLDIRYEDSDLIVVNKPAGMVVHPSLGHAGGTLVNALLAHCPDLEGVGGERRPGIVHRLDKDTSGLIVAAKHDQALWQLQNQFKQRTVAKVYLALVNGSLQPPEATIDAPIGRDPRHRQKMAVVTSQSGDARPAQTAYRALTYYPEYTFVECRPHTGRKHQIRVHMAYIGYPVVADSLYGRRKDKLGLKRHFLHATELTFHRPSDGAEVRVTAELPDDLAAALAALALLS
>NZ_LN890655.1|WP_157912774.1|60758_61376_-|signal-peptidase-II
MIDPENIVGDADEQQLPPAITPVTPAVAATPPLPKPRLGEILFPFLVTGTVLLIDQVTKNLVETRIPLYSYWAPIPALANIFRITHTANTGAVFGLFQGSGWFFAILAVVVASAIVYFNVTLPGRQWLLRLALGLQLGGALGNLTDRLRQGHVTDFIDVGPWYIFNVADMALVGGVILFGLVLLRDERRLRAAQPGALRPAEPQE
>NZ_LN890655.1|WP_095041607.1|61417_62086_-|methyltransferase-domain-containing-protein
MLTSLRRNLLLRFFHLLYHQLAWAYDAVSAAVSLGRWQDWGAAALPFVNGASVLELGHGPGHLLARLADEGRPAIGLDLSPQMGRLAARRVGGRGFPARLVRGRGQALPFAAAAFDAVIAAFPAPYILEPATLAAIRRVLRPGGRLVIVPQAGLMGGGVLVRAIERLYAITGQRDTGQNGADKTRDYWTERLAAADFDVEVWDVEDGHSAVTVLVATRPTHP

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Crispr_ID: NZ_LN890655_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_2

149365-149451

Orphan

Consensus_repeat	Method
GGAGTGGAGCTGGAAGCTCTACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890655_2

>merge|NZ_LN890655|2|149365-149451|CRISPRCasFinder
GGAGTGGAGCTGGAAGCTCTACCAGTGGTGTAGTGCGGAACTTCCAGTTCCGCGTGTGGGATGGGGAGTGGAGCTGGAAGCTCCACC

>NZ_LN890655|2|2|149365-149451|CRISPRCasFinder
GGAGTGGAGCTGGAAGCTCTACC	AGTGGTGTAGTGCGGAACTTCCAGTTCCGCGTGTGGGATGG
GGAGTGGAGCTGGAAGCTCCACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095041669.1\|146070_147543_+\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_LN890655.1\|WP_095041668.1\|145294_146056_+\|SDR-family-NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|187608
NZ_LN890655.1\|WP_095041667.1\|143664_144234_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_LN890655.1\|WP_162292420.1\|150915_151554_+\|FHA-domain-containing-protein	unknown	unknown	gnl\|CDD\|366133
NZ_LN890655.1\|WP_157912785.1\|138707_139643_+\|dienelactone-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|224423
NZ_LN890655.1\|WP_095041681.1\|158297_158816_+\|bidirectional-hydrogenase-complex-protein-HoxE	unknown	unknown	gnl\|CDD\|236053
NZ_LN890655.1\|WP_095041676.1\|153042_154650_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|380161
NZ_LN890655.1\|WP_162292421.1\|155653_156613_+\|P1-family-peptidase	unknown	unknown	gnl\|CDD\|239070
NZ_LN890655.1\|WP_095041673.1\|149798_150833_-\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_LN890655.1\|WP_095041679.1\|156612_157164_+\|LOG-family-protein	unknown	unknown	gnl\|CDD\|224527
NZ_LN890655.1\|WP_095041666.1\|141791_143681_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LN890655.1\|WP_095041671.1\|148061_149162_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl\|CDD\|236947
NZ_LN890655.1\|WP_095044766.1\|137351_137759_+\|holo-ACP-synthase	unknown	unknown	gnl\|CDD\|234610
NZ_LN890655.1\|WP_095041672.1\|149457_149796_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226202
NZ_LN890655.1\|WP_157912784.1\|137751_138657_+\|PIG-L-family-deacetylase	unknown	unknown	gnl\|CDD\|132487
NZ_LN890655.1\|WP_095041680.1\|157192_157990_+\|uridylate-kinase	unknown	unknown	gnl\|CDD\|239774
NZ_LN890655.1\|WP_095041665.1\|139697_141701_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_LN890655.1\|WP_095041675.1\|151619_152975_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379575
NZ_LN890655.1\|WP_095041670.1\|147564_147981_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095041677.1\|154812_155631_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095041669.1\|146070_147543_+\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	1.47961e-41
NZ_LN890655.1\|WP_095041668.1\|145294_146056_+\|SDR-family-NAD(P)-dependent-oxidoreductase	gnl\|CDD\|187608	cd05350, SDR_c6, classical (c) SDR, subgroup 6. These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	3.37303e-55
NZ_LN890655.1\|WP_095041667.1\|143664_144234_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.38021e-18
NZ_LN890655.1\|WP_162292420.1\|150915_151554_+\|FHA-domain-containing-protein	gnl\|CDD\|366133	pfam00498, FHA, FHA domain. The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.	6.38282e-20
NZ_LN890655.1\|WP_157912785.1\|138707_139643_+\|dienelactone-hydrolase-family-protein	gnl\|CDD\|224423	COG1506, DAP2, Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism].	6.30642e-07
NZ_LN890655.1\|WP_095041681.1\|158297_158816_+\|bidirectional-hydrogenase-complex-protein-HoxE	gnl\|CDD\|236053	PRK07571, PRK07571, bidirectional hydrogenase complex protein HoxE; Reviewed.	6.57545e-84
NZ_LN890655.1\|WP_095041676.1\|153042_154650_-\|GAF-domain-containing-protein	gnl\|CDD\|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp\|Q2G2U4.1\|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	7.96293e-61
NZ_LN890655.1\|WP_162292421.1\|155653_156613_+\|P1-family-peptidase	gnl\|CDD\|239070	cd02252, nylC_like, nylC-like family; composed of proteins with similarity to Flavobacterium endo-type 6-aminohexanoate-oligomer hydrolase (EIII), the product of the nylon oligomer degradation gene, nylC. EIII is an amide hydrolase that catalyzes the degradation of highly-polymerized 6-aminohexanoate oligomers. Together with other nylon degradation enzymes, such as 6-aminohexanoate cyclic dimer hydrolase (EI) and 6-aminohexanoate dimer hydrolase (EII), EIII plays a role in the detoxification and biological removal of the synthetic by-products of nylon manufacture. EIII shows sequence similarity to L-aminopeptidase D-amidase/D-esterase (DmpA), an aminopeptidase that releases N-terminal D and L amino acids from peptide substrates. Like DmpA, EIII undergoes autocatalytic cleavage in front of a nucleophile to form a heterodimer. DmpA shows similarity in catalytic mechanism to N-terminal nucleophile (Ntn) hydrolases, which are enzymes that catalyze the cleavage of amide bonds through the nucleophilic attack of the side chain of an N-terminal serine, threonine, or cysteine.	4.19677e-78
NZ_LN890655.1\|WP_095041673.1\|149798_150833_-\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	1.96833e-82
NZ_LN890655.1\|WP_095041679.1\|156612_157164_+\|LOG-family-protein	gnl\|CDD\|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	7.49565e-36
NZ_LN890655.1\|WP_095041666.1\|141791_143681_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	2.11959e-178
NZ_LN890655.1\|WP_095041671.1\|148061_149162_-\|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl\|CDD\|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	2.92228e-180
NZ_LN890655.1\|WP_095044766.1\|137351_137759_+\|holo-ACP-synthase	gnl\|CDD\|234610	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional.	1.0634e-46
NZ_LN890655.1\|WP_095041672.1\|149457_149796_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	9.07184e-06
NZ_LN890655.1\|WP_157912784.1\|137751_138657_+\|PIG-L-family-deacetylase	gnl\|CDD\|132487	TIGR03446, mycothiol_Mca, mycothiol conjugate amidase Mca. Mycobacterium tuberculosis, Corynebacterium glutamicum, and related species use the thiol mycothiol in place of glutathione. This enzyme, homologous to the (dispensible) MshB enzyme of mycothiol biosynthesis, is described as an amidase that acts on conjugates to mycothiol. It is a detoxification enzyme. [Cellular processes, Detoxification].	1.78498e-56
NZ_LN890655.1\|WP_095041680.1\|157192_157990_+\|uridylate-kinase	gnl\|CDD\|239774	cd04241, AAK_FomA-like, AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).	8.85954e-63
NZ_LN890655.1\|WP_095041665.1\|139697_141701_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_LN890655.1\|WP_095041675.1\|151619_152975_-\|hypothetical-protein	gnl\|CDD\|379575	pfam14353, CpXC, CpXC protein. This presumed domain is functionally uncharacterized. This domain is found in bacteria and archaea, and is typically between 122 and 134 amino acids in length. It contains four conserved cysteines forming two CpXC motifs.	1.00318e-26
NZ_LN890655.1\|WP_095041677.1\|154812_155631_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	1.63021e-39

>NZ_LN890655.1|WP_095041671.1|148061_149162_-|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MASVSFRHVHKRFGDVSVIKDFNLEIADKEFMVFVGPSGCGKSTNLRMLAGLEDVSEGDILIGDRVVNDVPPKDRDIAMVFQSYALYPHMSVYDNMAFGLKLRKMPKDEIDRRVKEAADIMGLTNLLDRKPKALSGGQRQRVAVCRAIVREPSVFLMDEPLSNLDAKLRVTARAEISKLHQKLGTTFIYVTHDQVEAMTMGDRIAVLADGLLQQCDTPRNLYNEPVNIFVAGFIGSPAMNFFNGTLVSEEGRQFIDTGDFRLKIPADRKEKFASYVGKEVVMGIRPEHVHSPEFAPPNIVGENVNATVEVVELLGHELHLYLNSGKNSFVGTVDPRFAVQSGNNITVAFDVNSMHLFDKTTELAIR
>NZ_LN890655.1|WP_095041670.1|147564_147981_-|hypothetical-protein
MPEAHYQPGQSFALQFAWRLPPGDYLRAIFQADVVELVPGADKYIIRLSRLLAGREDDAEGQVKALDALEGDYWDMVRGLTGRTITIAYEADDGRPLYLRLATLTGEHNFFSRYEDAAVIARGLAARRRHNDAADTTE
>NZ_LN890655.1|WP_095041669.1|146070_147543_+|FAD-binding-oxidoreductase
MSDVKVPPTARGAREKSKVTPPVLPAEHLERVMAWGGATAGMSYVYRPSTAAALHETLTLAQRSGRTVGLRGGGNSYGDAAMNSENVVVDLRRMNRILEWDATTGRIRLEPGVTLAQLWQYVLEDGWWPPVATGTSLTTMGGSAAMNVHGKNAFRVGPIGDHILEFDLMLASGETITCSRQENSDVFHAAIGGFGMLGIFTSLTIQMKHIYSGLLDVETTTQDDLAGMFAYFDDHVATSDYTVGWIDSLAAGKHTGRGDVHRANYLAPGLDPNPSQSLRLENQHIGPNLFGIMPRSIMWLFMRPMMTDAGLSLVNFGKFLAGRVGGVKRYRQPHAQFHFLLDYIPDFKKAYGPGGLIQYQPFIPQATAHDAFAELLTLCQRRGLPNYLTVLKRHRPDDFLMSYSVDGFSLAMDFRVTTENRQRIVWLAREMDEIVLRAGGRFYFAKDSTLRPETALAYLGAERIETFRALKRRCDPGGLLETDLWRRVFG
>NZ_LN890655.1|WP_095041668.1|145294_146056_+|SDR-family-NAD(P)-dependent-oxidoreductase
MTSSVNRPLEPQQRAIIVGASSGLGAALVRRLAAQGYRVAAVARREAELAALRESVGRGLVCPYVHDVTEYEQVPLLFDQIVRDLGGLDLIIYVAAVQPPVAPTEYDFAKDRAMLETNLLGAVAWLNQAATRFERSRRGHIVGISSIAGERGRVGSPVYNTSKAGLNTYLEALRNRLSRHGVTVTTIKPGFIDTELLKNAPKTFWVISPDTAAAQTLDAIAHRRQVAFVPPRWQFVGLVVRAMPSAIFRRLNF
>NZ_LN890655.1|WP_095041667.1|143664_144234_-|MarR-family-transcriptional-regulator
MLHPPPPDGDTQHQFVTFAESLYAEGDPRVHRLMDELRKVAHQLYRLSESSLDESSLSYAQFRVLMTLLFNEWRGNTQGINPSAISENQGTSRNTISALIRGLEEEGLIERQLDEDDRRRFYIRLTEAGRHKVREHARQHMQFVATLFAVFNSEELDTLGSLLGRLNQCAQSVRDERTVSHGGSHASSR
>NZ_LN890655.1|WP_095041666.1|141791_143681_-|ABC-transporter-ATP-binding-protein
MQAVGKTRGAPKTGRPSLNSLGRALRYLAKYPRLTIGATVALIIATAAQLVVPQLLQQIIDTIITAATNQGILNLPANVQAIAAQQLGLDLTAAQAELDGAPRAILTAGLIIVLFAIARGLFSFGQNFLSQALSENIAFDLRNDIFTKIQRLSFSYHDRNRTGQLMIRATDDVERLRSFIAMGLLMALQAFILLAGTLIILLLTNVRLTLVVLPILPIALIVFMVFGAVAQPLFVEVQKRLGRVNTVLQENLAGLKVVKAFTSEPREEKRFHDSIDSLLEQRVKVNRIFSFLFPFIFLIANLGQAAILYFGGRQIIDGTLTLGEWQKFSLYLVYIFLPMGQLGFIISLMAQAGASADRIFEILDAKNDVENKPGAVDLGEIDGVVEFKDVTFRYFAGSEPVLSSINLRANPGETVALLGATGSGKSSIINLIPRFYDVSEGQVLIDGHDVRDVTLESLRQRIGIVLQETVLFSGTIRENIAYGRPDASDADIMAAARAAAAHDFIEGFPQGYDTPVGERGATLSGGQKQRVAIARALLLDPHILILDDSTSSVDLNTEYEIQKALDSLMKGRTSFVIAQRISTVVNADLILILDKGEIVARGTHEELMDNSPIYADIYHSQLAGDIAPA
>NZ_LN890655.1|WP_095041665.1|139697_141701_-|ABC-transporter-ATP-binding-protein
MMNENARALGMETSKARSVSGTLRRLWHYFRHYSWVLLLVAFLVIAGTYMQVLIPDLTGQAVDCYLGPISIRATAGAGAEFLASLAGDAGGSGAFSNCWYTTTAADAPTDELVRGFGGLILLIVGLYVGSAIFSGLMFYLMSWAGFRVLRDLQAEVFGHIHRLSLGYFTKHEVGDVMSRFTNDMDTLQQVIGFGLVSVLQGGLMIVWVVVVMFQKNAPFALISLLTLPLMVILTRWFSNQARKAFRKARQQIGNVNADLQESISAVREVQAFSREGENIQQFRESNAANRDANIRAQAYTGALGPMLEGLTYVSLAIVAGVGGLLMLNGQGLLGTTISVGLITTFIGYTQQFNRPVQQIAIQWATIQSAVAGAERIFGLLDETVEITDRPGAAEMPAIQGHVVYRDVHAEYNPGEPVLRGVDIEAQPGQSIAIVGPTGAGKTTIINLLPRFWDVSSGSLTIDGIDVRDVTQASLRRQIGIVLQDSFLFSDTVMNNIRYGRPEATDEEVMAAAQLAHADEFINRLQDGYQTILGERGAGLSQGQRQLLSIARVALIDPRILILDEATSSVDTRTEKQIQKALEKLLDGRTSFVIAHRLSTIRHADQVLVVDGGRIIERGTHQSLLAERGFYYDLYMSQFRRKDAAALAAEAADDTEEAEELAYFVPGD
>NZ_LN890655.1|WP_157912785.1|138707_139643_+|dienelactone-hydrolase-family-protein
MLRMLSWLFGFAAGVTAVIVAFFARRMVAPARQPLWTSPAEMGMTFENVQFPAQDGVRLSGWFIPAPRDGGRAGATIILAHDWTWNRLGDAAADLLANLSGATPVELLRLAHALHFEGYHILMFDQRNHGESAAHPPVTFGQAEANDLQGALAYLHTRPEVDKARVGVIGFSMGANAVLYSLPLTDDIGAAIAVQPMTMATYAQGYARDLLGAAGGLVLPLIESTYAAFSGVRLDALQPSFAAAGGGGTPVLFVQCKADPWGSMEDVNRLRSATPEGQGPLYVDGNHRYQGYQYLIENPRIAVAFFEQYIG
>NZ_LN890655.1|WP_157912784.1|137751_138657_+|PIG-L-family-deacetylase
MAEPLAGQGPLDSGGASRYRLLVVLAHPDDESFGMGGTLARYADEGADVHIAIATDGVAGSVAGGYEHTLKELALVRRKEVEAAVGVLGGTLHMLGYRDSGYIGDPANQHPDAFINSDTDEATGRVVALIRQIRPQVVVTHDETGGYYHPDHIYCWKITLAAFEAAGDAARYPAIGPTPYQPQRLYYTAFSNRMVKFFTVLMRLRGQDPKRAGRNKDIDWTRIGIEPHRLHAHINYRKYWDVKRAAAAEHPSQGGGPARMRMLPESVQRRYLSTETFIRAYPPAADGHREYDLFAGIDPAS
>NZ_LN890655.1|WP_095044766.1|137351_137759_+|holo-ACP-synthase
MMLAVGVDIIEVERLTRGLARFGDRFCDRFFTPREQEQCARRPASLAGRFAVKEAVGKALGTGIGDIGWKEIEIVNDERGRPVLTLHGAAAELAGARGLNEWAISLAHTATHAVGMAVATQSSPNHAAGAEDNNG
>NZ_LN890655.1|WP_095041672.1|149457_149796_-|helix-turn-helix-domain-containing-protein
MTDRQRPICPRCDKRARQARDGRTPAGSQRYRCGFCGCRYTPLPKDQGYEEEIRFQALQLYLEGRSLREVGRLLNVNHQSIANWMKDYARYLPPDMPPDIAELARLEGLFVL
>NZ_LN890655.1|WP_095041673.1|149798_150833_-|serine/threonine-protein-kinase
MSDSPVIDAAALDEGAAEAVGAGWPYKEGTVLRNRYRLTHVVGQGGMGNVYRAEDLRLPGRLCAVKEVIPDLHLSQELRDQAHQQFLQEASILAQLDHPNLPKVSDFFSDNLRDYLVMDFVPGKDLKQWLDDSRAQHRQLSENTVLTWASQIIDALSYLHRQAPPVVHRDIKPSNIKLTPDERIKLVDFGLVKLLSPDDARTITVVQGRGTALYTPLEQYGGDSGHTDARTDIYALGATFYHLLTGTPPPDAKTRFLNPQALRPPIQLSDGISAHVSDAVMWAMEMHPDDRPQSLTQFAQALFGHGARPRVAQAGTWADALRANWLPAVLALALFVLALLATLI
>NZ_LN890655.1|WP_162292420.1|150915_151554_+|FHA-domain-containing-protein
MDDRPVLMVSEGELIGQRWTLAKDEVVIGRGNDADIVLPERQVSRYHLKIHYHDGRFSLEDLDSKNGTFLNGQQVKGTVGLQDGDEIQIALCVRLLFVGSDATVPLSFDIPRVDGGMVLEENKRTVSIRGRELDPPLSLAQFRLLEMLYDADGSVCDRDDIIEAVWPGTGGLGVSEQAIDALVRRLRDRLAEIDEHNYIVTVRGHGFRLDNP
>NZ_LN890655.1|WP_095041675.1|151619_152975_-|hypothetical-protein
MQTQISCPNCGTPYVADIYQVIDVGREPQLKEMLLSGQLNFAVCPNCGAGGRIATPLLYHDQAHDLFMIHVPQEINLDHLRREELVGRLVQQAINQTPMEQRRGYMFQPQTMLTMQSFMEKVWGTEGVTPEMLARQQRQVELLRTLATASPDVQEFLIKDRRQDIDETFFSILRAQIDATSQMGDPNEVVGLLNLQAKLMTETEIGRQLEKQQIALGTLRREAKKAGGLSPELLAKHVIANDADESLVSALALTGQQALTYDFFARLTTEAERREKAGDKAGGQRLGRVRDQLLEMQREMQAAAQQVLQEAQSTLDAILAAPDVEQAVEQQLGRLDEAFMHVLEARLLHAEQSGRREELDKLALIQAVIISRIQGDTPPEIQLLTQLLGAPGKADRERVMAEAAEMISPELIEMVDLVREQAVGAGQGDLAERLVEIRAELNARLLVAGGD
>NZ_LN890655.1|WP_095041676.1|153042_154650_-|GAF-domain-containing-protein
MSRALVDIRILQREYLLAISRAMTAELDLHDLLRLILKSAVELVAGQAGMIALADEGGETMRVAAVYGIPPHLVDHFAPLVRGIPYREGHEGEAFPELANQLKLIAREADLALSQVIRLPLSSGGTVIGLIYVFQTGNYYFVEDAPNLLRSFAEQAAIAVRNARLYQQVNQEKQRSDAILEQSADGVMILDRHLHITVFNKALSQMTGWPATEAIGRAHDDVIQWASLKTEADLRTALENQWPLPNAAYLYVEGEALRHQDSSCASDRRAITLGITYAPLMDADGRMTDIIANVRDLTRYREEEALQKTFISVISHELKTPVAIIKGYAGTLRRPEGHWSPQILAESLTVIEEEADNLNALIDNLLEVSRLQAGTFTLEISDEINLPRLAENVARRFATQTTLHRIETDFPDDYPTIIGDERRLIQVLNNLVSNGIKYSPDGGLITIRGEVHPQHVTVAVCDEGIGIPARDQYRIFQKFSRLDNALSRKTEGTGLGLYLSRAIIEAHRGRIWFHSNSDDEPGAPGTTFTFSLPRD
>NZ_LN890655.1|WP_095041677.1|154812_155631_+|alpha/beta-fold-hydrolase
MPFLNRDQHSIYYETAGDAARPPLLIIAGITDSIAKCEWQVMDLAADFHVITFDNRGAGRSTTPPAGYSVGDMAGDAAAVLAALGLESAHIFGFSMGGMIALHLALDYPQLVRRLVLGCTTAGGRLSVRPEDLVMTALLNPEGSGDTRQDFYDRLWISLSDPCLAEQPAVVARLADLAADNPQTPLGYAGQLQAVLTHDVADRLDRLRAPTLVLHGEADRLIPVENGRLLAASIPGARLIVYPGAGHLFFVERATEVNRDIRDFVCAAEAIS
>NZ_LN890655.1|WP_162292421.1|155653_156613_+|P1-family-peptidase
MIDFAGIRIGHATYPQNYTGCTVFLCPPGTFGSVDARGPAPGSREFALLAPDKPEDKEVNAIVLTGGSAFGLATADGVMRYLSERGIGHPTPIRPVPIVPAAVVFDLGLNNEPFMPNATAGYDACVAADAFTGDIAQGNVGAGTGVLVGKWAGFPHMMKGGFGVASLRVGEVVVAAAAVVNAVGDVVNEDGGVLAGARDPAGGWLAAENPLRYVEWGSPPPAGTNTTLVVAATNARLSRSELSRLTHQAHNGLAIAVRPSHTRHDGDVAFALTTSRVSGDLTLVNNMVVAVVGEAIRNGVRHAASVMGIPGLAGTREED
>NZ_LN890655.1|WP_095041679.1|156612_157164_+|LOG-family-protein
MAQPIISVFGSSAPLPDSEPYEEARQLGAMLAEAGFTVATGGYGGTMAAVSRGAAEAGGRVIGVTSGHLEKWRPMPPNEWVSEEIRHPSQRERLLHLVMNNDGMIALPGGIGTLSEVALAWSLMQTGEIAERSLVLLGPTWRETIRVYAQAEYIRPRDMDLIYLATSAETAVGYTRQRLAARL
>NZ_LN890655.1|WP_095041680.1|157192_157990_+|uridylate-kinase
MSDLIFLKLGGSLLTDKTGTEALRADTLQRLAAEIAAARAADPQLRLVLGHGSGSFGHVAGARHGTRAGVVGPAQWAGFAEVADAAARLNRHVIAALLAAGVPAVGLPPSASALVSDGYIRELAVAPIQAALAAGVTPVVFGDVAFDAARGGTIISTEEVMDYLAARLRPAWFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKVAAMVALVEANPGLAIRIFSGLIPGLLTRLLVDPGLAVGTRLAAG
>NZ_LN890655.1|WP_095041681.1|158297_158816_+|bidirectional-hydrogenase-complex-protein-HoxE
MSSRNEKIEPPSDDKRWRIVQATMQRNGFERDGLIETLHTVQESFGFLDEDSLRYVAASLNAPLSQVYGVSTFYHLFSLKPAGRHTCVVCLGTACYIKGIPLLLKEIENEYGIKAGETTADGNLSLMTARCLGSCGLAPVAVFDGEIAGKVNVHEAMDRLHALQEAYDVRQA

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Crispr_ID: NZ_LN890655_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_3

1317495-1317581

Orphan

Consensus_repeat	Method
CCACTTCCGAAGTGGGTTGCACCTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890655_3

>merge|NZ_LN890655|3|1317495-1317581|CRISPRCasFinder
CCACTTCCGAAGTGGGTTGCACCTAATCGACATTCCCAGGTGCGACCCATCTCTGAGGTGGCCACTTCCGAAGTGGGTTGCACCTAA

>NZ_LN890655|3|3|1317495-1317581|CRISPRCasFinder
CCACTTCCGAAGTGGGTTGCACCTAA	TCGACATTCCCAGGTGCGACCCATCTCTGAGGTGG
CCACTTCCGAAGTGGGTTGCACCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095042588.1\|1327479_1328646_-\|xylose-isomerase	unknown	unknown	gnl\|CDD\|237170
NZ_LN890655.1\|WP_095042583.1\|1319109_1320414_-\|DUF58-domain-containing-protein	unknown	unknown	gnl\|CDD\|224635
NZ_LN890655.1\|WP_095042576.1\|1308693_1309179_+\|Holliday-junction-resolvase-RuvX	unknown	unknown	gnl\|CDD\|340815
NZ_LN890655.1\|WP_157912923.1\|1310333_1310957_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380565
NZ_LN890655.1\|WP_095044830.1\|1325950_1327465_-\|xylulokinase	unknown	unknown	gnl\|CDD\|198374
NZ_LN890655.1\|WP_095042574.1\|1304483_1307237_+\|alanine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234701
NZ_LN890655.1\|WP_102136554.1\|1309168_1310353_+\|endolytic-transglycosylase-MltG	unknown	unknown	gnl\|CDD\|376862
NZ_LN890655.1\|WP_095042589.1\|1328862_1329537_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LN890655.1\|WP_095042579.1\|1310985_1311993_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042585.1\|1321629_1322730_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042587.1\|1323909_1325850_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	unknown	unknown	gnl\|CDD\|235542
NZ_LN890655.1\|WP_095042573.1\|1303460_1304078_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_157912925.1\|1322868_1323906_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042590.1\|1329549_1330935_+\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|273593
NZ_LN890655.1\|WP_095042575.1\|1307359_1308493_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042581.1\|1314738_1317387_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042582.1\|1317590_1319024_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl\|CDD\|184633
NZ_LN890655.1\|WP_095042572.1\|1302897_1303464_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095042584.1\|1320413_1321379_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_LN890655.1\|WP_157912924.1\|1311979_1314553_+\|transglycosylase-SLT-domain-containing-protein	unknown	unknown	gnl\|CDD\|381604

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095042588.1\|1327479_1328646_-\|xylose-isomerase	gnl\|CDD\|237170	PRK12677, PRK12677, xylose isomerase; Provisional.	0
NZ_LN890655.1\|WP_095042583.1\|1319109_1320414_-\|DUF58-domain-containing-protein	gnl\|CDD\|224635	COG1721, COG1721, Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) [General function prediction only].	2.48301e-31
NZ_LN890655.1\|WP_095042576.1\|1308693_1309179_+\|Holliday-junction-resolvase-RuvX	gnl\|CDD\|340815	cd16964, YqgF, putative pre-16S rRNA nuclease YqgF and RuvX family. Escherichia coli YqgF has been shown to act as a pre-16S rRNA nuclease, presumably as a monomer. It is involved in the processing of pre-16S rRNA during ribosome maturation. The RuvX gene product from Mycobacterium tuberculosis was shown to act, in a dimeric form, as a Holliday junction resolvase (HJR). HJRs endonucleases specifically resolve Holliday junction DNA intermediates during homologous recombination. Holliday junctions are formed by the reciprocal exchange of strands between two DNA duplexes. HJRs occur in archaea, bacteria, and in the mitochondria of certain fungi; they may form homodimers and display structural similarity to RNase H and Hsp70.	8.85869e-54
NZ_LN890655.1\|WP_157912923.1\|1310333_1310957_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380565	cd06342, PBP1_ABC_LIVBP-like, type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine). This subgroup includes the type 1 periplasmic ligand-binding domain of ABC (Atpase Binding Cassette)-type active transport systems that are involved in the transport of all three branched chain aliphatic amino acids (leucine, isoleucine and valine). This subgroup also includes a leucine-specific binding protein (or LivK), which is very similar in sequence and structure to leucine-isoleucine-valine binding protein (LIVBP). ABC-type active transport systems are transmembrane proteins that function in the transport of diverse sets of substrates across extra- and intracellular membranes, including carbohydrates, amino acids, inorganic ions, dipeptides and oligopeptides, metabolic products, lipids and sterols, and heme, to name a few.	1.62835e-20
NZ_LN890655.1\|WP_095042574.1\|1304483_1307237_+\|alanine--tRNA-ligase	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_LN890655.1\|WP_102136554.1\|1309168_1310353_+\|endolytic-transglycosylase-MltG	gnl\|CDD\|376862	pfam02618, YceG, YceG-like family. This family of proteins is found in bacteria. Proteins in this family are typically between 332 and 389 amino acids in length. This family was previously incorrectly annotated and names as aminodeoxychorismate lyase. The structure of YceG was solved by X-ray crystallography.	7.13745e-97
NZ_LN890655.1\|WP_095042589.1\|1328862_1329537_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.80272e-88
NZ_LN890655.1\|WP_095042587.1\|1323909_1325850_+\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B	gnl\|CDD\|235542	PRK05644, gyrB, DNA gyrase subunit B; Validated.	0
NZ_LN890655.1\|WP_095042590.1\|1329549_1330935_+\|HAMP-domain-containing-protein	gnl\|CDD\|273593	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase. Members of this family contain a sensor histidine kinase domain (pfam00512) and a domain found in bacterial signal proteins (pfam00672). This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc.	7.81743e-67
NZ_LN890655.1\|WP_095042582.1\|1317590_1319024_+\|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl\|CDD\|184633	PRK14338, PRK14338, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	4.67208e-179
NZ_LN890655.1\|WP_095044830.1\|1325950_1327465_-\|xylulokinase	gnl\|CDD\|198374	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. D-xylulose has been used as a source of carbon and energy by a variety of microorganisms. Some uncharacterized sequences are also included in this subgroup. The prototypical member of this CD is Escherichia coli xylulokinase (EcXK), which exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ is required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_LN890655.1\|WP_095042584.1\|1320413_1321379_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	5.99539e-99
NZ_LN890655.1\|WP_157912924.1\|1311979_1314553_+\|transglycosylase-SLT-domain-containing-protein	gnl\|CDD\|381604	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.	3.15516e-43

>NZ_LN890655.1|WP_095042581.1|1314738_1317387_+|hypothetical-protein
MSGNFDWQTEEDDRRGQTNWDEPTEPQRPASTRRPLPWRLIAVVTVLVAAVCGIIWWRIDRQIEDTLQAFRTDVIASHNLIQRAAADGDEEIFRSALSGRVPSWTASELDVFNAGLFADRAPFGLSPAEGSLPVILDPPDEEAAAGESVADIAFSPDLNEAIVTVNQPFRQEGTTETIVLQQTAVFRRGDSRWLLAPPLEEFWGEWITTEGDYLSLIYPTRDEAVAARLAADLDAEIGRLCDTLADIRCSADLHLTVRLDSNPAALAAVATPLGALIRARMDEDILELPAPTLVGLPTGDAAEAGYAALRDGYARLLLPAVVAQAVNWPCCEESMLFDMLLEYQLSELGFLDWSVDEADYRHVLESRLRLSDLSYTTAPGNSAEALAAQLQETRTAVDFLTHGVPGVTAAGLQRAVGNSRNIARFLNNALAAAEQEASTPRPGNLDLAYWLYAFQQGSDPAEPLALPADEDLYLACTAEDGSQTTDTSNFLRYAAGADRWDEMYNLSGFIWISALPDPTTLLMQEFALSNEGWQTNVWRNGGRETVYTPEPDRFALSLGETDPQGRRMVTYTFDPDYDAVRAFAVDLKNCDGDCATSDLVGLPFWSPNGEWAIYVENAAGFPQSTYMAANERYIMLEADTPFVDRPLTLGPGDADPDSADLVALGEGYSPFWLDAQTFGYIRRSPDGGRPSRADQEIVLASIDDTAGETLITAAGLFQSLPATLPTDRLSLAYVATHAGQPGRLFVVAVDDLGQRAYVILHDLATGLSEARLALDAEFNHSLGFSPDGRYLVLTGQGRRTTAPGDVNGLLLLHDVAENQTYPFMTLLPFFLPSVVYDWSADGSRLAMAFEDNLIGIIAPDERGVAMLSHGYGNCTSVAWLKR
>NZ_LN890655.1|WP_157912924.1|1311979_1314553_+|transglycosylase-SLT-domain-containing-protein
MLNSSRRRSVWPLLAALMIGLAGCRSGEPPATAPTAVTDRNATAPALLPTPTLAAPGSVDPLRPPTPQVMPSPTWPSDMPTAEPPAGATSDATTLDPTTAETAAIEPTATPALPPDATAEELFALGQRAAAEGDQATAAAAFQAVLDDPGDLDEATLAEARLGLAVALLAEGQHDVAALELETVMQTPLDRAATGRETNDTADRAAFHLAQARAAAGDWPGAVEAYRAYLQNNPDMAAYVQPLIADAHEAQGDTAAARAALEGALDGSAQRFQAVGNHSRLAALYLAAGEYAAAIAQYDAIHDIARTEATKGQMTYLAGQAELLAGNTAAAQERFRFAVENYPRAAESHAALVALVDAGAAVDDYWRGVVDYYAAAYAPGVEALRRYIAAAPEEFRPDAHLFLAWSLEGLGDAAGALAALDAFATHEPARALFERGELLVRAGRNEEALAAYDQFLTEFPEAEGGAGVAWAAAALADGAGLADAGARYLALADAFPFDENAPAALARAAELTDEAEEAALLRQRLTEQYPANVLGAEALFRRLLAGEEGAADQVATLTPSNYFALRAADFVAGAAPFTAEWPLSLPDDPDDGRAEAEAWLRELPVLAGVTLPADLGALSAELAGDARLVVGRKLWRLGLREEAKAELEVVREAYAADPLANYQLALFFRDLGLYRSSIVAASTLLGQAGATVFDAPRFLGRLAYPAYFADLILPLAEQYGFDPRLQFALVRQESLFESFARSGAAAQGLSQVIPDTGAWIAQRLAWPDFVNEDLYKPYVGLNFGAYYLSEQLRNFDSLVHAALAAYNGGPGNAARWLEAAGADHDRFVDTIDFPETRLYIERIYEGFNAYRHLYGQP
>NZ_LN890655.1|WP_095042579.1|1310985_1311993_+|hypothetical-protein
MIIKRIIGLIMLLAGLALLVLALAGAYFAGDVIGSLANGVATSLTLAAQSLDSAQETLVVARATVDDVYGGLDTAVNATANSARILGDSRPLLDNVTAVTTQEVPEAVEGIQAALPNMIEVATVIDNTLTTLSAVGIDRDIPLPFGGSIPLNFDLGIDYNPETSFDDSLRGFEGSLAGLPESLRGLETDLQATNDNLALLATDLQATSDNLSSINTRVGEILPLFDQYAALVDELSNTVTQVEAQVGDRLDMARMGIIALLIAVGLTQLAPIYLGWELLTGRRDRPAPVMVAAAAPVPAPIIYPSPQLPAPTAALIAETEPSGEPPWADEDHAEL
>NZ_LN890655.1|WP_157912923.1|1310333_1310957_+|ABC-transporter-substrate-binding-protein
MWNAAARVFLLALALLAAGCASVDPVVKIGLVAPFEGRQRAVGYDAIYSARLAVREINAAGGVGGHRVVLVALDDRGDAALAADAAASLGIDPGVVAVVGHYLPETTEAAAPLYAADGLALLPLGAPPFAPTDPAQLPPAFLEAYAAVTPFDETAGPLAGPTYDAFGLLALALAQAEQTTGGITRASVQEALGGLEYEGLTGVVYWP
>NZ_LN890655.1|WP_102136554.1|1309168_1310353_+|endolytic-transglycosylase-MltG
MKNDAAPDRLSLFGILIRVVVVGVVLLAVAAAGMVLYRMWLGGGVDRAAINPNLSQTQRLYLEYYFSDHAAALELPAGSGSAPLPFTVAPGEGAAVIAENLRAAGLLNDTELFLNYLTYYGLDGGLVAGEYQLDPRWTVPQLAEALGAGGARALELRFLPGWRSEEMANYLRVVRPARIDPDEFLTIVQTQQGLDTGAFSFLGALPAGATLEGYLFPDAYTITPDTDAAALVGMMLANFDRQVTPAMRQGFGAQGVALREALILASIIEKEAALAEEKPLMAAVFLNRVRAGMRLQADPTVQYALGYDGAADTWWPSPLSADDLAVSSPYNTYQVDGLPPGPISNPGLASLQAIAAPAGVDYLFFVLDCAADIAGRHAFSVSYEEHVANVERCR
>NZ_LN890655.1|WP_095042576.1|1308693_1309179_+|Holliday-junction-resolvase-RuvX
MTDINPQQGRVMALDLGEKRIGVAISDTTRTIATPHSVLKRTSRAADFAHYARLIADHGITLLVIGLPITLGGQEGQRAAWVRDYAAGLAEHVATPITFWDESLTTVEATAALHAQGRRGKQVKERVDAVAAALILQSYLDAQRPDAQRPDAQRPENLYEE
>NZ_LN890655.1|WP_095042575.1|1307359_1308493_+|hypothetical-protein
MALRVIEIDPAETFYSLRDRLLAGQRERVVLVAPGGRMPLVGLDLVLLRRLADRERLNVGLVTADSRLARQARALGLPAFATLTAAEYYRPGWRRGRRRERVGLTPGEAIAPPDELSRRRLWPVIVLMSLVALGLLAAAVFALPRAVITLRPATLPAQVILDLAIEPQLAAPSGDALPGHTVTFTQTWDTSGPATDDPAADRQRLRALARQGLAAAAPDILAARLGPNELLAPDSVQVATIEEEFTRAEGVARLRLSAGLTAQAVAAADVAAAAYPRLAAALPAGFAPLPESLRLSVSATSGPADHLQVTARADGRARIDTAALTQLVRGQPSADALRYVAGLPLAEPPTLAVWPGWWRWVGRLPLRAERIRLALVP
>NZ_LN890655.1|WP_095042574.1|1304483_1307237_+|alanine--tRNA-ligase
MRPTTSNEIRKAFLDYFHEMRHEIVPSAPLPQKDNPTLLFTNAGMNQFVDVFLGKEKRAYKRATTAQKVMRVQGKQNDLENVGPSARHHTFFEMLGNFSFGDYFKREAIDYAWGFLTGVMELEPERLFATVYTDDDEAADLWTRYLPGERILRFGKDDNFWEMGDIGPCGPCSEIHYYSGDLADINPAGVNNDNIPGYVEVWNLVFMQFERQKDQSLVPLPHPSVDTGMGMERLVRVIQGVESNYDTDLFTPVLSRVQQLLGDSDAQRDANYVGYRVIADHGRAATFLIADGVQPGNTGAGYVLRMIIRRAARFGRKIGFHEPFLGEVAQVYIDQMGDNYSELRQRRDLILHTLRREEERFNRTLDKALLHLDELVDDLHRRGEKQIPGDVAFNLYATYGLPLEITRDVAGEQHGMTVDEKGYNAAREAHALASGSGAFANYVVGANVYSDVLRALIDGGDLDESGVDYDPYSGASLETTVLALISDGQRSNAAHAGQRVEVVTAATPFYVEAGGEVSDTGRITTPGGVEMRVDDTRRPVPGLIIHSGEVTTGELKPGDMALLEVDRARRADIRRNHTATHLLHRELRAHLGRHVAQAGSLVAPDRLRFDFTHDKAVDRATLGRIEAAVNEAILVNYPVNVAHMGQKEAIQAGAMALFGEKYGDIVRTIRVGEDPLPSPLPGGEGIRGSLQGGEGNGAPYSFELCGGLHVDETGEIGLFRFTGEEAVGAGVRRVEAMTGRGAYQFVAERLNLLDRLAGKLNAPVAEVEQRLEALLEHDRSVERELDAAGRRLARGQFDVLLGGLMQVKGARVLAAQVDVANVERLREMADWFRDRVPSGAAVLGAVSDGKPFLVATVTDDLIARGLKAGDLAREVAKIVGGSGGGRPNMAQAGGRDPERLADALAAVAGLVDAALKD
>NZ_LN890655.1|WP_095042573.1|1303460_1304078_+|hypothetical-protein
MSIPSSRDATEIVNAQLAPGEQLLWVGRPKQGFAIRASDLLFIPFTTLWLIGAIWISIALLRQDGVASLRFTFPFILFGAAFIISRFWFDAKLRGRTFYGVSDRRLIIITYWLGQESDFVNLKELLELRYTHRSDRTGTLEFFTHFGGFNRLRGLGLGYNRGGLWWPGTRHWRFMIPPAFEMIANPLEVEQLIRQAWDKAKTAVN
>NZ_LN890655.1|WP_095042572.1|1302897_1303464_+|hypothetical-protein
MPGEATTIITSHLSPGERLLWAGRPKQGLLLRGEDAFLIPFSLIWSLPVLSRLSSRAVLSNPIDLLFLVMGLYLLVGRFIVDAWLRSRTYYGVTDRHGVIIRLSTAAEMQSVSLTSLSYLKLTLRRGGTGTIEIGRPRKSSIFGPRASRAFPFPGAHDYLPPAFEAIPNAREVYDLIVRTQQHTLQAL
>NZ_LN890655.1|WP_095042582.1|1317590_1319024_+|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTKTYHFWITGCQMNYADARRVATELEKLGYQATPRAEDADVVVLETCTVRQQSEDKAYHKLHALRPLKARRPEMTVAVMGCVVGVRGNEALEQRFPFVDVFMEPSTDGRPLISHLSQDGDHDLELAETAARHALMDDLGAGEQGSGGAGEMIFSPAPLPPRSPALQVSAPVAIVYGCSHACTFCIIPQKRGIERSRSVGEIAAEVRGLVAQGVKEVVLLGQIVDRYGYDVPDGPDLADLLRVINGVDGLERIRFLTSHPSYMTDRILRAVAELPKVMPQIEIPIQAGNNDVLAAMKRGYTREQYRDLIGRVRDIIPDAAIHCDVIVGFPGETAEQFQDTYDSLAELRLDKVHLARYSPRPGTVSARRMADDVADEEKRRRFQAIEALQKTVSTEKMRRYLGQTVEVLVEGQDKGRWRGRTPHNKLVFFDDPGQWVGQLVDVIITHAGPWSMSGKRAEATPVARPQLLAEPIPLIVL
>NZ_LN890655.1|WP_095042583.1|1319109_1320414_-|DUF58-domain-containing-protein
MAAFLGQRRVVVFALALVAFIAGLITGRDLLFTLAYLLGLLLILSFIWAWLNLNGVHLSRVTRVRRTQVGRPLEERFTVRNTTIAPKLWLEVRDFSDLPYHYSSHVVNSLGPRQSYSWRVTTICRQRGRYQLGPVRLRTSDPFGLFPMERDLTPTSNVVVFPMTFEIHQFALPVGILPGGDALRRRTHYITTNASGVRDYEPGDSFNRIHWRSTARRDRLVVKEFELDPLADIWIVPDMSVYGHVAPRRETAPPTPPPGDIPGWLKMQDFRLPESTEEYTVTIAASVAQFFLRRDRAVGMLAYGQSNEILQPDRGERQFNRILETLAVLRAQGDVPISDMLYAETHLFPRGTTVIVVTPNTREEWSVAARQLSRRGLRVVTILVNPASFYGGRSAEPLYQLLRAGGQVAYMVNNGDDMTAALSRGATQPGYFTV
>NZ_LN890655.1|WP_095042584.1|1320413_1321379_-|MoxR-family-ATPase
MADIQATANRIVENVEHVMVGKRSAVQLTVLGLLCQGHILIEDVPGVGKTVLAKSLAKSVGCKFQRIQFTPDMLPSDVTGVSVFNQKTREFEFRPGPIHAQIVLVDEINRATPKTQSALLEAMEERQVTVDGHTYPLDVPFMVLATQNPIEYEGTFPLPEAQLDRFMLRIRLGYPGKEEEIEVLNRQQHQHPVNTLTQAVGIEELRAAQEAVKDIYVDQLVKEYIINIVRQTRDHPDVYLGSSSRGALAIYRLGQARAALLGRDYVLPDDVKALAGPALGHRIIVGPAARIKDIEPEQIVQDIVDQMAVPGAQVGRQRVRA
>NZ_LN890655.1|WP_095042585.1|1321629_1322730_+|hypothetical-protein
MNKLFFSLIFLLALLVTVACGGSGGVAEPTVQPAATEQSPTAEAEATAAPTETAMPQTAGTACPEATADTYLLRNPQHGYCLLYPAGHKVERPNAQEVALVVGSLLNVTEPRVGITVTPAAGRTAAAYADEIVAGFEGFEIARSETTVAGEPAIVLDDVPGQDINRQVIFTHEDRLFHLYFSPIDPADTAVMDAFAAGILDSLTFIPVSETVTAADECVAPKESEQQILNEALGFCFLAPADFTFEQPSETNANLFVGSMMDVEHPRLMIEVTPANGQTATAAADALVAEFEGFDIPRTFGDTLGYQPADRLDGVPGQDLGRVLLAVHDDRLYRLTFVPADPTQGDVYAQMEALFAQVLATFRFLP
>NZ_LN890655.1|WP_157912925.1|1322868_1323906_+|hypothetical-protein
MGYNPPVIMVQKSDKPATLPGVFSTLAAGFELTTRYLWLMVIPALLDFFLWIGPRLSFRPLIESLIAQLPAESLQLVPTAMLESLTGINFFAYLSVVFLGVPALMRGPTPAATPIQPAIIERAGIGEWAGYLALLTLAGLLLAAIYYGLIAYALRRMGAAAMNTTAPFNPLRFVRRVGRTWLRLAGLMGLFLLLSLIIFFPTSLLAGFLSLINQTIGALVIMGALVIMIWIIMFLSYTPQGMTLNPRPFLPSLVESVQLFRRNLPASLGLLLVVTLARQLLATILLTADSGTWVTGINLLAHAYISTALIVALFIFYRDRYAAFLQTAPATQVGPQPPATQQEQP
>NZ_LN890655.1|WP_095042587.1|1323909_1325850_+|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-B
MTTKTKQNDSTAVNYDAGNIQVLKGLEAVRRRPGMYVGGTDIKAFHHLTNEIVDNSIDEALAGRCDRIEVTIHPDSSVSVGDNGYGIPVAEHPTEKVSALQVVHTSLHSGGKFDNAAYKVSGGLHGVGAAAVNALSEWMEVEVKRDGAVWKQRYERGIPVTPVQRLRDLKKGEETGTTTTFKADETIFTEDHVYRFEMLANRFREMAFVTSGVFIRLSDARVSPSRDMSFYFEGGVRSFVRYLNRNRKTLHEPIHVRKEMENVDVEVAVQYTDGVSISEFAFANTINTPDGGTHLTGARTALTRVINNYARKNNFLKEKDKNFSSDDTREGVTLVVSVKHPDPQFESQTKVKLMNAEVAGHVSAVLGEALQAFLDENPREAKRIIDRCLTSSRARDAAKAARELVMRKSALDSLTLPGKLADCSERDPARAELYIVEGESAGGTAKQGRDRHFQAILPLRGKILNTERARLDKILGNNEVKALISALGTGIGESFDLSNLRYGRTIIMTDADVDGSHIRTLLLTFFFRYMPTLIENGHLYIAQPPLYAVKHGKEISYAYNEGERESLMKRLNGQKLSVQRYKGLGEMNAEQLWETTMDPSVRTLLQVTVDDAVVADRTFDMLMGDEVAPRRRFITTHASEVRNLDV
>NZ_LN890655.1|WP_095044830.1|1325950_1327465_-|xylulokinase
MRYLLGLDLSTTAAKALLVDSDGRVAGVGSSLLSVSNPRPLWSEQAPADWWAGMVVAIRQALGEAGVAGEAGVAGEAIAAIGLTGQMHGLVLLDAAGEVLRPAILWNDQRTAAQCDEIRRRVGRDRLIRICGNDALTGFTAPKILWVRDQEPELYAKARHVLLPKDYIRYRLSGDFAMDCADGSGTMLFDLARRTWSAELLDALELPSAWFPPIYEGPAITGVVSAGAAAETGLRAGTPIVGGGGDQAAQAVGVGAVAPGIVALTLGTSGVVFAATEAALVQPEGRLHAFCHAVPGRWHFMGVMLSAAGSLQWYRDKLAPNTPFEALDAEARAVPPGSEGLLFLPYLTGERTPHPDPLARGAWVGLTVRHGRGHMTRSVLEGVAFGLRDSFTLIREAGLGDIHQVRISGGGARSQLWRQILADVLGVELVIVNTTEGAAFGAALLAGVGAGIWPDVATACAETIRLTGHTPPDAATAATYEPIYGLYRGLYPALRESFTALNAI
>NZ_LN890655.1|WP_095042588.1|1327479_1328646_-|xylose-isomerase
MADYSPHPEHRFTFGLWTVGNMGRDPFGEPVRHKLSPVEIVHLLAEVGAYGVNFHDNDLVPIDATPAERSRIVADFKNALRQTGLVVPMATTNLFTDPAFKDGAFTSNDPRVRAYALQKTLRGIDLGVELGASLYVFWGGREGVETDAAKDPVTAIKRNREAMDFLCNYVIDQGYELRFALEAKPNEPRGDMYNATTGHMLAFIETLEHPSMVGVNPEVAHEHMAGLNFLHNVAQAWEAGKLFHIDLNDQSFGRYDQDFRFGAVNLKAAFFLVKFLEDTGYAGSRHFDAHAYRTEDYEGVKEFARGCMRTYLILKDKAARWNADEDIRALLAEINADDGSLSHLTGKYQPAKAQGLKAMEFDRAGLGARGLGYERLDQLTNEVILGAR
>NZ_LN890655.1|WP_095042589.1|1328862_1329537_+|response-regulator-transcription-factor
MRVLVVEDEPGIAGFIRQGLTEAGYAVDSVADGRDGLDYAAVANYDVLVIDVMLPRLNGLDMLRELRRRGDKAPALLLTARDTVDQRVEGLDAGADDYLVKPFAFPELLARVRALLRRPPLQTGVILAVGDLELDTATRAVRRADRPIDLSPREFAVLEYLMRHPNQVLTRTQIGEHVWNLDFFNESNVIDVYVGYLRRKIEDGHGQPLIHTIRGVGYRLSAAP
>NZ_LN890655.1|WP_095042590.1|1329549_1330935_+|HAMP-domain-containing-protein
MNGLSRLPLRARLTVWYTLVLGLILLAFSAFVYARVRAGLLAQVDAALTLAANQALLGVAEGDGRLTFAESGRNPQALRRLSDDFVIFLLSPSGTVLDTLSSDDQLPQFPPQPSGSATLFAEGDAWRVYSQVITIAGREGRLLAAQELDPVNTTLLSLEGQLLLGLPLALLLAGLGGYYLAGRALRPIVHITRTAQAITAGNLDRRIAHDGPADEVGRLAQTVDGMLDRLEAAFARERRFTADAAHELRTPLTALKGRLGVTLSRPRPVTDYRATLIEMEEQVDRLIRLTNDLLFIARLEQAEFRPRLEDVEVTSLFGSLLDQLRLLAAARSVALVEELPPGLYLRGDIDLLIRLFLNLLDNAIKYTPPEGQVTVRGEKDDRYVTIAIHNTRSSIPAEHLPHLFERFYRVADDRTRGEGSGGAGLGLAIAWEIARAHGGALTVQSDPQQGTTFRALLPSGS

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Crispr_ID: NZ_LN890655_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_4

2109976-2110075

Orphan

Consensus_repeat	Method
GAACTTCCCAGTTCCACCTTCCCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890655_4

>merge|NZ_LN890655|4|2109976-2110075|CRISPRCasFinder
GAACTTCCCAGTTCCACCTTCCCCTGGGCAAGTGGAACTTCGATGCGCTGCGCAACGCGCTCACCAGCCGGGATTGAACTTCCCAGTTCCACCTTCCCCT

>NZ_LN890655|4|4|2109976-2110075|CRISPRCasFinder
GAACTTCCCAGTTCCACCTTCCCCT	GGGCAAGTGGAACTTCGATGCGCTGCGCAACGCGCTCACCAGCCGGGATT
GAACTTCCCAGTTCCACCTTCCCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095043210.1\|2117606_2118767_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274552
NZ_LN890655.1\|WP_095043196.1\|2101351_2101894_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|226255
NZ_LN890655.1\|WP_095043198.1\|2102735_2104040_+\|flagellar-biosynthesis-protein-FlgA	unknown	unknown	gnl\|CDD\|226576
NZ_LN890655.1\|WP_095043197.1\|2101980_2102364_+\|PTS-sorbitol-transporter	unknown	unknown	gnl\|CDD\|367579
NZ_LN890655.1\|WP_095044862.1\|2102369_2102729_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|367683
NZ_LN890655.1\|WP_095043203.1\|2108259_2109972_+\|phosphoenolpyruvate--protein-phosphotransferase	unknown	unknown	gnl\|CDD\|224006
NZ_LN890655.1\|WP_095043202.1\|2106797_2108183_+\|2-oxo-acid-dehydrogenase-subunit-E2	unknown	unknown	gnl\|CDD\|237001
NZ_LN890655.1\|WP_095043195.1\|2100764_2101322_+\|PTS-glucitol/sorbitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|367578
NZ_LN890655.1\|WP_095043212.1\|2119538_2119943_+\|succinate-dehydrogenase	unknown	unknown	gnl\|CDD\|239581
NZ_LN890655.1\|WP_095043199.1\|2104058_2104766_+\|class-II-aldolase/adducin-family-protein	unknown	unknown	gnl\|CDD\|376358
NZ_LN890655.1\|WP_095043201.1\|2105758_2106745_+\|alpha-ketoacid-dehydrogenase-subunit-beta	unknown	unknown	gnl\|CDD\|223101
NZ_LN890655.1\|WP_095043213.1\|2119972_2120368_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|239580
NZ_LN890655.1\|WP_095043207.1\|2114153_2115230_+\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|183150
NZ_LN890655.1\|WP_095043209.1\|2115974_2117483_+\|glycerol-kinase-GlpK	unknown	unknown	gnl\|CDD\|198362
NZ_LN890655.1\|WP_095043200.1\|2104758_2105766_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	unknown	unknown	gnl\|CDD\|238958
NZ_LN890655.1\|WP_095043205.1\|2110944_2112927_+\|PTS-dependent-dihydroxyacetone-kinase-operon-transcriptional-regulator-DhaR	unknown	unknown	gnl\|CDD\|183114
NZ_LN890655.1\|WP_095043206.1\|2113344_2114070_+\|aquaporin-family-protein	unknown	unknown	gnl\|CDD\|223653
NZ_LN890655.1\|WP_095043208.1\|2115233_2115863_+\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|182192
NZ_LN890655.1\|WP_095043211.1\|2118814_2119537_+\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	unknown	unknown	gnl\|CDD\|223555
NZ_LN890655.1\|WP_095043204.1\|2110112_2110940_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095043210.1\|2117606_2118767_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274552	TIGR03377, glycerol3P_GlpA, glycerol-3-phosphate dehydrogenase, anaerobic, A subunit. Members of this protein family are the A subunit, product of the glpA gene, of a three-subunit, membrane-anchored, FAD-dependent anaerobic glycerol-3-phosphate dehydrogenase. [Energy metabolism, Anaerobic].	1.12883e-135
NZ_LN890655.1\|WP_095043196.1\|2101351_2101894_+\|PTS-glucitol/sorbitol-transporter-subunit-IIB	gnl\|CDD\|226255	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism].	1.00745e-86
NZ_LN890655.1\|WP_095043198.1\|2102735_2104040_+\|flagellar-biosynthesis-protein-FlgA	gnl\|CDD\|226576	COG4091, COG4091, Predicted homoserine dehydrogenase [Amino acid transport and metabolism].	1.10866e-156
NZ_LN890655.1\|WP_095043197.1\|2101980_2102364_+\|PTS-sorbitol-transporter	gnl\|CDD\|367579	pfam03612, EIIBC-GUT_N, Sorbitol phosphotransferase enzyme II N-terminus.	4.56217e-58
NZ_LN890655.1\|WP_095044862.1\|2102369_2102729_+\|PTS-glucitol/sorbitol-transporter-subunit-IIA	gnl\|CDD\|367683	pfam03829, PTSIIA_gutA, PTS system glucitol/sorbitol-specific IIA component.	6.64328e-45
NZ_LN890655.1\|WP_095043203.1\|2108259_2109972_+\|phosphoenolpyruvate--protein-phosphotransferase	gnl\|CDD\|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	0
NZ_LN890655.1\|WP_095043202.1\|2106797_2108183_+\|2-oxo-acid-dehydrogenase-subunit-E2	gnl\|CDD\|237001	PRK11856, PRK11856, branched-chain alpha-keto acid dehydrogenase subunit E2; Reviewed.	6.35109e-141
NZ_LN890655.1\|WP_095043195.1\|2100764_2101322_+\|PTS-glucitol/sorbitol-transporter-subunit-IIC	gnl\|CDD\|367578	pfam03608, EII-GUT, PTS system enzyme II sorbitol-specific factor.	2.70785e-89
NZ_LN890655.1\|WP_095043212.1\|2119538_2119943_+\|succinate-dehydrogenase	gnl\|CDD\|239581	cd03501, SQR_TypeA_SdhC_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase C (SdhC)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Members of this subfamily reduce low potential quinones such as menaquinone and thermoplasmaquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are similar to the Thermoplasma acidophilum SQR and are classified as Type A because they contain two transmembrane subunits as well as two heme groups. Although there are no structures available for this subfamily, the presence of two hemes has been proven spectroscopically for T. acidophilum. The two membrane anchor subunits are similar to the SdhD and SdhC subunits of bacterial SQRs, which contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	2.62607e-21
NZ_LN890655.1\|WP_095043199.1\|2104058_2104766_+\|class-II-aldolase/adducin-family-protein	gnl\|CDD\|376358	pfam00596, Aldolase_II, Class II Aldolase and Adducin N-terminal domain. This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.	9.94599e-19
NZ_LN890655.1\|WP_095043201.1\|2105758_2106745_+\|alpha-ketoacid-dehydrogenase-subunit-beta	gnl\|CDD\|223101	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion].	1.12024e-171
NZ_LN890655.1\|WP_095043213.1\|2119972_2120368_+\|hypothetical-protein	gnl\|CDD\|239580	cd03500, SQR_TypeA_SdhD_like, Succinate:quinone oxidoreductase (SQR) Type A subfamily, Succinate dehydrogenase D (SdhD)-like subunit; SQR catalyzes the oxidation of succinate to fumarate coupled to the reduction of quinone to quinol. Members of this subfamily reduce low potential quinones such as menaquinone and thermoplasmaquinone. SQR is also called succinate dehydrogenase or Complex II, and is part of the citric acid cycle and the aerobic respiratory chain. SQR is composed of a flavoprotein catalytic subunit, an iron-sulfur protein and one or two hydrophobic transmembrane subunits. Members of this subfamily are similar to the Thermoplasma acidophilum SQR and are classified as Type A because they contain two transmembrane subunits as well as two heme groups. Although there are no structures available for this subfamily, the presence of two hemes has been proven spectroscopically for T. acidophilum. The two membrane anchor subunits are similar to the SdhD and SdhC subunits of bacterial SQRs, which contain heme and quinone binding sites. The two-electron oxidation of succinate in the flavoprotein active site is coupled to the two-electron reduction of quinone in the membrane anchor subunits via electron transport through FAD and three iron-sulfur centers. The reversible reduction of quinone is an essential feature of respiration, allowing transfer of electrons between respiratory complexes.	1.94191e-19
NZ_LN890655.1\|WP_095043207.1\|2114153_2115230_+\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|183150	PRK11468, PRK11468, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NZ_LN890655.1\|WP_095043209.1\|2115974_2117483_+\|glycerol-kinase-GlpK	gnl\|CDD\|198362	cd07789, FGGY_CsGK_like, Cellulomonas sp. glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases. This subgroup corresponds to a small group of bacterial glycerol kinases (GK) with similarity to Cellulomonas sp. glycerol kinase (CsGK). CsGK might exist as a dimer. Its monomer is composed of two large domains separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The regulation of the catalytic activity of this group has not yet been examined. Members in this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_LN890655.1\|WP_095043200.1\|2104758_2105766_+\|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha	gnl\|CDD\|238958	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC). PDC catalyzes the irreversible oxidative decarboxylation of pyruvate to produce acetyl-CoA in the bridging step between glycolysis and the citric acid cycle. ADC participates in the breakdown of acetoin while BCADC participates in the breakdown of branched chain amino acids. BCADC catalyzes the oxidative decarboxylation of 4-methyl-2-oxopentanoate, 3-methyl-2-oxopentanoate and 3-methyl-2-oxobutanoate (branched chain 2-oxo acids derived from the transamination of leucine, valine and isoleucine).	7.0548e-139
NZ_LN890655.1\|WP_095043205.1\|2110944_2112927_+\|PTS-dependent-dihydroxyacetone-kinase-operon-transcriptional-regulator-DhaR	gnl\|CDD\|183114	PRK11388, PRK11388, DNA-binding transcriptional regulator DhaR; Provisional.	0
NZ_LN890655.1\|WP_095043206.1\|2113344_2114070_+\|aquaporin-family-protein	gnl\|CDD\|223653	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism].	1.57874e-71
NZ_LN890655.1\|WP_095043208.1\|2115233_2115863_+\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|182192	PRK10005, PRK10005, dihydroxyacetone kinase ADP-binding subunit DhaL.	7.05319e-102
NZ_LN890655.1\|WP_095043211.1\|2118814_2119537_+\|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit	gnl\|CDD\|223555	COG0479, FrdB, Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit [Energy production and conversion].	2.57839e-67
NZ_LN890655.1\|WP_095043204.1\|2110112_2110940_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	5.48579e-104

>NZ_LN890655.1|WP_095043203.1|2108259_2109972_+|phosphoenolpyruvate--protein-phosphotransferase
MSHTVNGIPASPGIVIGPTWTFSPPRADVEAYTVANPGVEQLRVRAAVAAAVEQLAALEERARATIGDEEAEIFAAHQMLIEDDDLLADIHNLIETRHVNAEAAVHEIIEATAESMLELDDDYFRARSADMRDIGRRVIYALMGVTADVGRLPPEPSIIIADDLTPSDTVQFDPANVLGLATVRGGPTSHTAILARSLGIPAVVSAPVELGSLANDTPAILDGLSGRVTFFPTTDEVEEAQAQRRDFLERLAGDHATRLEPALTRDGVHVEVVANIGNAEDARRAIDNGAEGVGLFRTEFLYLDRDTLPGENEQIAAYRAVAEIIGDRPLVVRTLDIGGDKAVPYLGFAAEANPFLGWRGIRLIDHHADVLLGQFRALLQASVGADLRIMVPMVASVEEAVQARGILNEAQVALHAEGRPQAERVQFGVMIEVPAAALMADKLAEVVDFFSIGTNDLTQYTLAVDRTNERVAALATPFHPAVLRLIAQTIEKAHAAGKWVGLCGEFAADPAAVPVLLGLELDEFSMAPSAIPTVKAAIRRLDRAECRAIAQDVLNLPTAAAVREYLAAHS
>NZ_LN890655.1|WP_095043202.1|2106797_2108183_+|2-oxo-acid-dehydrogenase-subunit-E2
MAKEVIMPKFGFTQEESQIVEWLVKEGDKVDAGDPLLEVTTDKVNMEVEAPAAGIVAGISAAAGDIVPVTRVIAYILAPGEGLPQGAGEQGGRGAGETAVATAPLSSTAPSSATAPLSSTAPSSATATPIATRVAAASGVELSRVAGTGPGGRVTRQDVESFLAAPPAADGKARATPAARRLARESGIDLAAVAGTGPRRRIQADDIQAALDTTTPAAPPATQAVAGPATAIEPQRQPFSTMRRTIARAMQRSMQEAPHITFQADIDMTAIQNLVARANERRAADSDKMTLTAALTRAVAWALGRNPALNSHLGDDELLVWPVVNVGIAVALDDGLIVPVVKDVAATGIGRLSDEIRDLGRRARAGKLRPEELADATFTISNLGMFGVDRFTAIINPPQVAILAVGRANRLFVPGPDDQPVVRPICTMTLSADHRAIDGATAARFMGDLREVVENPALMVV
>NZ_LN890655.1|WP_095043201.1|2105758_2106745_+|alpha-ketoacid-dehydrogenase-subunit-beta
MRELTYAEALREALRQKMTADERVFILGEDVGIYGGAFAVTAGLFNEFGENRVIDTPISEAAITGACVGAALTGMLPVGEIQFMDFVTLSMEQLVLQAAKIRFMFGGKATVPMVLRMPGGSGTGAAAQHSESLENWFVHVPGLKVVMPSTPYDAKGLLIAAIEDENPVIFVEHKLLYRTKGHVPEEMYRVPLSQSNVVRPGRDLTVIATSIMVSRAVEAAEKLAAEGIELEIIDPRTLNPLDEKPIVDSVIKTGKALVVHEAVQTGGFGGELVARIAASEAFDYLDAPVRRLAGLDMPIPYNRTLEYHTVPQVEAIVAEARRLARGEY
>NZ_LN890655.1|WP_095043200.1|2104758_2105766_+|thiamine-pyrophosphate-dependent-dehydrogenase-E1-component-subunit-alpha
MNEKTAPGSDAAEVNVAGILDEIGPELAREMLYRMMLTRAFEEKALELYSLGQVHGTMHLSIGQEATAAGANFALTNNDYLINTHRGHGHMLCWGSDVDRMMAEFLGREAGFCRGRGGSMHIADVERNNLGANGIVGGGLPISVGVGLSIKFRRTDQVCLTIFGDGAANEGAFHEALNMASIWDLPIIYLCENNQYAMSMSVKRAFNIERISRRACAYGIVGVTVDGNDPLAVYQAVSEAKARAQAGDGPTLIESLTYRWKGHSKSDREAYRTREEVKEWQGRDPIPLFAGVLGLPPAEIDALQARASARIEEAVTFAKNSPEPELSSIMEGVYA
>NZ_LN890655.1|WP_095043199.1|2104058_2104766_+|class-II-aldolase/adducin-family-protein
MPKSAVRETYHYLVGSVGHWSAPVSRTLDERVRDTLIPRRSREAFVAAVRSAAAAGLTAGTLSEASIRLGQEKFAITTRTCRASAITEDDLTVAALHDRWVIGREELPRFAPLHRLFYRATAAGAVLLTQPVAALTIAARRLAPPAHLLADAAADVGDLICFDFQPGDDVLAETDDANWPAIATELIAIISERQALLLPGYGLLTWGNDLGQAVARAEAVERWCAIALNYYDANE
>NZ_LN890655.1|WP_095043198.1|2102735_2104040_+|flagellar-biosynthesis-protein-FlgA
MTTLRERLRAYEAEHGPIRVGLVGAGQMGTGLMSQMEKMDGMKVVAVADVLPGRPKAAYVESSVAAELVHETDDAGRAAALIADGRRVATSSSDLLARIDNLDVIVEATGIPEIGAAVCLAAIEAGKHTVNMNVEADATVGYYLGRLAAEHGVTYTLSAGDEPGTIKELYDFADALGFQIVTIGKGKNNPLDRTCNPDHVAEKARRNNMSAKMLASFVDGTKTMVEMTAVANATGYAPEVRGAYGPKCTVPELAKVFVPKAAGGIFDAPGAVDYAVGDVAPGVFVIITTDQPKIITDLRYLRLNGHGNYWAIYRPYHLANLETPISVANAFLDRRATIVTLRPPVAETIAVAKRDLQPGDTIDALGGFTVYGMIDKAEAARDEQIVPLGLVVGAQVLRPVKMGEPVRYGDIHLKEGQVITELRRRQDELLRVAA
>NZ_LN890655.1|WP_095044862.1|2102369_2102729_+|PTS-glucitol/sorbitol-transporter-subunit-IIA
MNKYEGQITAIGPYVVEFLEANILVLFGLSAPEELAEFAVLHDGTTLHAPLATGDTLYVGSSSFQILAVGEVANANLANLGHLVVKFNGENEPEQPGDVCAEALPLPEIAVGMRIRIEG
>NZ_LN890655.1|WP_095043197.1|2101980_2102364_+|PTS-sorbitol-transporter
MSEENQYRRVKISAGKRGWGGPLIIAPTPKKPYIYCVTGGGIHPIAQRIADLTGAIAFDGFKSKRDFDEIAVAVIDCGGTARIGVYPMKGVLTVDIYNTKPSGPLFRFIKADNFVSGVTADDIQLID
>NZ_LN890655.1|WP_095043196.1|2101351_2101894_+|PTS-glucitol/sorbitol-transporter-subunit-IIB
MNSLNRFLSRLGRAVGGVVGTLYQAGREAIDQVIVNILPFMAFIALVIGIILKTGIGDWIANALAPLAGNIWGLLVISLICAIPVLSPLLGPGAVIAQVVGTLIGSTLIASGAMAPHLALPALFAINPQVGCDFIPVGLALGEAEPETVEVGVPAVLFSRLITGPLAVVLAWLASFGLYS
>NZ_LN890655.1|WP_095043195.1|2100764_2101322_+|PTS-glucitol/sorbitol-transporter-subunit-IIC
MDFLVSLAEGFIGLFQEGAAVFVSLVTGIVPLLIILLTFVNALIALIGPDRINRVGEWAARPGLVYYPVRYILLPFLSVFFLTNPMAYTMGRFLPERYKPAFYDAAVSYVHPPTGIFPHINPGELFVWLGISAGITSLGLSIVPLAVRYLLIGLVVIFIRGIVTELMTARMWPRTDAVEATTTAY
>NZ_LN890655.1|WP_095043204.1|2110112_2110940_+|inositol-monophosphatase
MLNYQHTLDTAVAIAREAGALLMEGFGQVKQIERKSSAVDWVTQYDKASEALITGRLHAAFPDHALVGEEGTNTGDAGGYRWYIDPLDGTGNYAHGFPIFCVSMGLYHAGEPVLGVIYDPVLDECFTAIAGQGAYLDTAQGRRRLQVTAETELVAGLLATGFPYDVHTSPRNNLDYLGGFLVRAQGIRRPGSAALDVAYVAAGRLDGYWELKVYSWDMSAAILMVQEAGGRVTFLDGRPITLEHRFDVLVSNGLLHEQMLTVIRQTEAATAPIGA
>NZ_LN890655.1|WP_095043205.1|2110944_2112927_+|PTS-dependent-dihydroxyacetone-kinase-operon-transcriptional-regulator-DhaR
MHPTGIGIGHEALVAAWQAFMENGRAEEIAGGIDPAVVRSWRRCVYRFNPQSRPRPASISRNALYSIIRAQQDLITIATPFIEDIHQFTEGSRYAVALADGAGCLLIIGGDPTAVEQAGALGFSQGTYWSENSAGTNGLGLALMEAMPVQVVGAEHYFSYLHEFVTAAAPIHDVRGRVIGLLGMIGPRDPVTSHTLGLVMAAARAIGNQLQANWYLEEANQHLGQVNTILGAIVEGVIVWNQQGEIRHVNEQAANMLQINPRTVVGRPLADVVRLPPELVTAIDAGDEFRDVEVSLQALGRDVRCVVTLRPIFEAGAQPVSYVALLSPIEHVRQIAQQQYGAQTGLSIEDIQADSPGMRRVVRQSRTAARGAAPVLILGEGGVGKNLLARAIHNDGPRADRPFIDINCRAIPHELMTREILGREQDTNTRGQPSKFELADGGTLLLDQIENLTLELQAALLHVIETRHVTRLGSSQPIPVDVRIVGATTANLEELVAQGNFLSHLYYRFGVFKIDVPPLRERVEDIPLLAERFLARQTAREERPMWIEDEAVRFLTRYPWPGNVRELESALERAMSQSRDSVIRPGDLPEMVRNGRVLSGRHPLAQPVLSVDEAEREAIFRAGWACNGRVTEMAGLLGIGRSTLWRKMRQLEISPSIFKN
>NZ_LN890655.1|WP_095043206.1|2113344_2114070_+|aquaporin-family-protein
MSAYIGEVIGTMLLIILGDGVVANVVLGKTKGNSAGWIVITTGWALAVFVAVMVTGTISGAHLNPAVTVGLAVAGSFSWGQVPGYIIAQLVGAFLGAVIVWLAYYQHWAATPDPGSKLAVFSTGPAIRNTVWNLVTEIIGTFMLVFGVLGIRGAVMGTEAIDLGALGALPVAFLVWGIGLSLGGPTGYAINPARDLGPRIAHFLLPIPGKGGSDWGYSWIPVVGPIVGGIIGALLWGILGW
>NZ_LN890655.1|WP_095043207.1|2114153_2115230_+|dihydroxyacetone-kinase-subunit-DhaK
MKKLINAVPDVVKEQLEGMAAAHPDQLKVHYDDANFVYRADAPVPGKVAIISGGGSGHEPMHGGFVGMGMLDAACPGEVFTSPTPVQMYEAAKMVNSGAGVLFLVKNYTGDVLNFETAAELAHGDGIPVQNILIDDDVAVKDSLYTAGRRGVGTTVLVEKIVGAAAEAGYNLDQCADLARKANSYGRSMGMALTSCTVPAAGKPTFELGENEMEFGIGIHGEPGQKRMPFTTADEVTKLMAEEIITDPAYTRVVREWDRDAGDWVDISLTDEPLKKGDRVIAFVNSMGGTPVSELYAVYRKLDEVCKAHGIEIARNLIGPYITSLEMAGMSITLLKADDEILKFWDAPVKTPGLRWGV
>NZ_LN890655.1|WP_095043208.1|2115233_2115863_+|dihydroxyacetone-kinase-subunit-L
MVTKEQIVRWLELTTAVLSDNRDYLTQLDAAIGDADHGTNMDRGFQKVAEKLPTVADKDIGNILKTVGMTLISSVGGASGPLYGTFFQRGGMAADAKEELSDDDLVTTLQGAVDGVQARGRAQPGDKTMMDALLPAMVALRAAVAEGRGSAAAVAAAVAAAEQGMKDTIPLQARKGRASYLGERSIGHQDPGATSSYLILNALLEAIGE
>NZ_LN890655.1|WP_095043209.1|2115974_2117483_+|glycerol-kinase-GlpK
MADYVAAVDQGTTSTRCMIFNHHGLPVGIHQMEHKQIYPQAGWVEHDPMEIWARTQDVIKGALKNAGITAKDIAAVGITNQRETTVVWDKKTGQPYYNAIVWQDTRTDKLIKDFEGNVGQNRFRDKVGLPLATYFSGPKVRWILDNVPEAKAAAERGDAVFGNIDTWVIWNLTGGVDGGAHVTDVSNASRTMLMNLKTLDWDADIAQIMGVPLSMLPKVMPSSAVYGHTRENGPFGGRIPVSGDLGDQQAATVGQAALSPGEAKNTYGTGCFMIMNTGTEIVPSKNGLLTTLCYKFGDKPAVYALEGSIAITGALVQWLRDNLNFFDYSPHIEDYAKSVEDNGGVYFVPAFSGLFAPYWKSDARGAIVGLTRYVNKGHIARAALEATAYQTREVLDAMNADSGVPLTALKVDGGMVYNDTLMQFQADVLGVPVIRPQVAETTALGAAYAAGLAVGFWKSEDDIRENWAMAKTWEPDPDSKAGTENYRMWKKAVTRTFDWVEH
>NZ_LN890655.1|WP_095043210.1|2117606_2118767_+|FAD-dependent-oxidoreductase
MASFHAVIIGGGGTGAAVAHDLTLRGYKVTLVERGEVTSGTTGRHHGLLHSGARYAVNDKESAVECIEENMILRRIAPGSFELNDGLFIALTEEEAAYSHEFIEACHECGIPARRLTAREVLEREPNVNPKVLMGVQVPDATMDAMRMPLRFFATAQHAGATIKPYTEVVDFIKRGNAVSAIRVRDHTTNKEYEIGGDIFISAAGAWSGRVGDMVGVDVPIRPSPGVMLAVRGRLCNMVVNRLHKSGDGDIIVPQRALSVIGTSSWVVEDPDNLGLPQDHIDMMIKYGSELVPGVRTAPFRAAWSAARPLIGPRGADTGRELSRTFKCFDHADEGVEGFVTITGGKATTLRGMAETTANVVCRKMGYEAPCGTRDFVLLPHTAYYA
>NZ_LN890655.1|WP_095043211.1|2118814_2119537_+|succinate-dehydrogenase/fumarate-reductase-iron-sulfur-subunit
MAEQLIDFKVFRYKQGQAEPTYQTFRTPCDENTTVLVALQDIRRDQDSSLILRHSCHHASCGTCGLRINGREELGCVVKVLELGTATVTVEPMRNMPVISDLVVNMAPFYDRFNRAGLPFIRESEYLDEAEVAEGLESYSRCENCIECNLCVSACPIMGSDELYLGPATLAAVWRVVEEPRGLETRPLLDWVDSQNGCWRCHVAYECNAACPSEVYPGDKIMALRRELTKRKFRGFFGRR
>NZ_LN890655.1|WP_095043212.1|2119538_2119943_+|succinate-dehydrogenase
MHDIQPTTDPARPKSPLRAWFDIRGRGLGTLAFALNRLTAIGLTIYLFLHLVVLSQLLRGPEGWNSFVALARSPLFLALDVVLLFGVVYHMFNGIRVALVGMGVAHRQQRGLFYGLVGIGLVLFVVGAVLIFTK
>NZ_LN890655.1|WP_095043213.1|2119972_2120368_+|hypothetical-protein
MDNTISRRSLDQMAAQRDRSGSMWLVQAITGLLLVALLGTHMIVHHFVVEGGLRDFQQVMDYVSNPLVMVIEILFVICATVHGLLGVRSILVDLRPSARALGIIEWGLRIVGLVTIVYGIYLAVALQRMAG

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Crispr_ID: NZ_LN890655_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_5

2312626-2312793

Orphan

Consensus_repeat	Method
GATTTAAACATGGATAAGTTCGTGAAAATCCGTTTTGTCCGTTTTAATCCGTAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LN890655_5

>merge|NZ_LN890655|5|2312626-2312793|CRISPRCasFinder
GATTTAAACATGGATAAGTTCGTGAAAATCCGTTTTGTCCGTTTTAATCCGTAGCCATTCTTTAATCCGTAGCTCTCCTAAGAAATTGGCTACGGATTCATACGGAGGTTACGGATTTAAACAGGGATAAGTTCGTGAAAATCCGTTTTGTCCGTTTTAATCCGTAGC

>NZ_LN890655|5|5|2312626-2312793|CRISPRCasFinder
GATTTAAACATGGATAAGTTCGTGAAAATCCGTTTTGTCCGTTTTAATCCGTAGC	CATTCTTTAATCCGTAGCTCTCCTAAGAAATTGGCTACGGATTCATACGGAGGTTACG
GATTTAAACAGGGATAAGTTCGTGAAAATCCGTTTTGTCCGTTTTAATCCGTAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095043376.1\|2317124_2317511_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|143393
NZ_LN890655.1\|WP_157913053.1\|2319424_2322199_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237864
NZ_LN890655.1\|WP_095043373.1\|2312799_2314005_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_LN890655.1\|WP_095043366.1\|2303320_2303893_+\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_LN890655.1\|WP_095043365.1\|2302715_2303300_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_LN890655.1\|WP_095043371.1\|2307983_2308961_+\|deoxyhypusine-synthase-family-protein	unknown	unknown	gnl\|CDD\|376661
NZ_LN890655.1\|WP_095043375.1\|2316441_2316759_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|368831
NZ_LN890655.1\|WP_095044877.1\|2310276_2311008_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_LN890655.1\|WP_095043372.1\|2309000_2310146_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270308
NZ_LN890655.1\|WP_157913054.1\|2322336_2322990_+\|HAD-family-phosphatase	unknown	unknown	gnl\|CDD\|223710
NZ_LN890655.1\|WP_095043369.1\|2306422_2306929_+\|S-adenosylmethionine-decarboxylase	unknown	unknown	gnl\|CDD\|376892
NZ_LN890655.1\|WP_095044878.1\|2311136_2312075_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_LN890655.1\|WP_157913051.1\|2317678_2317843_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095044879.1\|2316770_2317082_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225495
NZ_LN890655.1\|WP_157913049.1\|2302111_2302609_+\|cytochrome-c-type-biogenesis-protein-CcmH	unknown	unknown	gnl\|CDD\|377161
NZ_LN890655.1\|WP_095043374.1\|2314417_2316379_+\|aldehyde-ferredoxin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|225277
NZ_LN890655.1\|WP_095043370.1\|2307010_2308003_+\|agmatinase	unknown	unknown	gnl\|CDD\|212538
NZ_LN890655.1\|WP_162292469.1\|2318044_2319361_+\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|237030
NZ_LN890655.1\|WP_095043368.1\|2305911_2306226_+\|EthD-family-reductase	unknown	unknown	gnl\|CDD\|131173
NZ_LN890655.1\|WP_157913050.1\|2317534_2317678_+\|DUF2442-domain-containing-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095043376.1\|2317124_2317511_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|143393	cd05403, NT_KNTase_like, Nucleotidyltransferase (NT) domain of Staphylococcus aureus kanamycin nucleotidyltransferase, and similar proteins. S. aureus KNTase is a plasmid encoded enzyme which confers resistance to a wide range of aminoglycoside antibiotics which have a 4'- or 4''-hydroxyl group in the equatorial position, such as kanamycin A. This enzyme transfers a nucleoside monophosphate group from a nucleotide (ATP,GTP, or UTP) to the 4'-hydroxyl group of kanamycin A. This enzyme is a homodimer, having two NT active sites. The nucleotide and antibiotic binding sites of each active site include residues from each monomer. Included in this subgroup is Escherichia coli AadA5 which confers resistance to the antibiotic spectinomycin and is a putative aminoglycoside-3'-adenylyltransferase. It is part of the aadA5 cassette of a class 1 integron. This subgroup also includes Haemophilus influenzae HI0073 which forms a 2:2 heterotetramer with an unrelated protein HI0074. Structurally HI0074 is related to the substrate-binding domain of S. aureus KNTase. The genes encoding HI0073 and HI0074 form an operon. Little is known about the substrate specificity or function of two-component NTs. The characterized members of this subgroup may not be representive of the function of this subgroup. This subgroup belongs to the Pol beta-like NT superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, co-ordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. These carboxylate residues are conserved in this subgroup.	1.37322e-09
NZ_LN890655.1\|WP_157913053.1\|2319424_2322199_+\|hypothetical-protein	gnl\|CDD\|237864	PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional.	0.000172204
NZ_LN890655.1\|WP_095043373.1\|2312799_2314005_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	2.32616e-157
NZ_LN890655.1\|WP_095043366.1\|2303320_2303893_+\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	1.24206e-06
NZ_LN890655.1\|WP_095043365.1\|2302715_2303300_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	9.18049e-36
NZ_LN890655.1\|WP_095043371.1\|2307983_2308961_+\|deoxyhypusine-synthase-family-protein	gnl\|CDD\|376661	pfam01916, DS, Deoxyhypusine synthase. Eukaryotic initiation factor 5A (eIF-5A) contains an unusual amino acid, hypusine [N epsilon-(4-aminobutyl-2-hydroxy)lysine]. The first step in the post-translational formation of hypusine is catalyzed by the enzyme deoxyhypusine synthase (DS) EC:1.1.1.249. The modified version of eIF-5A, and DS, are required for eukaryotic cell proliferation.	2.99334e-28
NZ_LN890655.1\|WP_095043375.1\|2316441_2316759_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|368831	pfam06296, RelE, RelE toxin of RelE / RelB toxin-antitoxin system. RelE is a family of Gram-negative bacterial antitoxins of the RelE/RelB toxin-antitoxin system. Its cognate antitoxin is family RelB, pfam04221.	2.63975e-09
NZ_LN890655.1\|WP_095044877.1\|2310276_2311008_-\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	3.34792e-82
NZ_LN890655.1\|WP_095043372.1\|2309000_2310146_-\|spermidine/putrescine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270308	cd13590, PBP2_PotD_PotF_like, The periplasmic-binding component of ABC transporters involved in uptake of polyamines; possess the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.694e-116
NZ_LN890655.1\|WP_157913054.1\|2322336_2322990_+\|HAD-family-phosphatase	gnl\|CDD\|223710	COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only].	2.09564e-44
NZ_LN890655.1\|WP_095043369.1\|2306422_2306929_+\|S-adenosylmethionine-decarboxylase	gnl\|CDD\|376892	pfam02675, AdoMet_dc, S-adenosylmethionine decarboxylase. This family contains several S-adenosylmethionine decarboxylase proteins from bacterial and archaebacterial species. S-adenosylmethionine decarboxylase (AdoMetDC), a key enzyme in the biosynthesis of spermidine and spermine, is first synthesized as a proenzyme, which is cleaved post translationally to form alpha and beta subunits. The alpha subunit contains a covalently bound pyruvoyl group derived from serine that is essential for activity.	2.59528e-15
NZ_LN890655.1\|WP_095044878.1\|2311136_2312075_-\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	8.15404e-91
NZ_LN890655.1\|WP_095044879.1\|2316770_2317082_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	3.1713e-17
NZ_LN890655.1\|WP_157913049.1\|2302111_2302609_+\|cytochrome-c-type-biogenesis-protein-CcmH	gnl\|CDD\|377161	pfam03918, CcmH, Cytochrome C biogenesis protein. Members of this family include NrfF, CcmH, CycL, Ccl2.	2.5688e-22
NZ_LN890655.1\|WP_095043374.1\|2314417_2316379_+\|aldehyde-ferredoxin-oxidoreductase-family-protein	gnl\|CDD\|225277	COG2414, COG2414, Aldehyde:ferredoxin oxidoreductase [Energy production and conversion].	3.56238e-171
NZ_LN890655.1\|WP_095043370.1\|2307010_2308003_+\|agmatinase	gnl\|CDD\|212538	cd11592, Agmatinase_PAH, Agmatinase-like family includes proclavaminic acid amidinohydrolase. This agmatinase subfamily contains bacterial and fungal/metazoan enzymes, including proclavaminic acid amidinohydrolase (PAH, EC 3.5.3.22) and Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA). PAH hydrolyzes amidinoproclavaminate to yield proclavaminate and urea in clavulanic acid biosynthesis. Clavulanic acid is an effective inhibitor of beta-lactamases and is used in combination with amoxicillin to prevent the beta-lactam rings of the antibiotic from hydrolysis and, thus keeping the antibiotic biologically active. GbuA hydrolyzes 4-guanidinobutyrate (4-GB) into 4-aminobutyrate and urea while GpuA hydrolyzes 3-guanidinopropionate (3-GP) into beta-alanine and urea. Mutation studies show that significant variations in two active site loops in these two enzymes may be important for substrate specificity. This subfamily belongs to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase.	5.74434e-143
NZ_LN890655.1\|WP_162292469.1\|2318044_2319361_+\|CAP-domain-containing-protein	gnl\|CDD\|237030	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit.	1.38472e-07
NZ_LN890655.1\|WP_095043368.1\|2305911_2306226_+\|EthD-family-reductase	gnl\|CDD\|131173	TIGR02118, TIGR02118, conserved hypothetical protein. This model represents a small family of proteins of unknown function, each about 105 amino acids in length. Conserved sites in the multiple alignment include a pair of aromatic residues, a histidine, and an aspartate. [Hypothetical proteins, Conserved].	2.45004e-15

>NZ_LN890655.1|WP_095044878.1|2311136_2312075_-|ABC-transporter-permease
MAFPSAYWLLIFFLIPVAIVFFVSLGERTRLGTVTYPDFDLGNLGAYFDDYARIFSRIDGEFIYLRIFGRSLWLALLNTVICLLFAYPFAYWIARQPAHRRNMLIFLVMIPFWTNFLVRTYAWMLILRDSGLINNFWSITLHEQAVRLAEVSPLFEGLAAATSHKLPLLYNFPSVLLGLFYGYLPFMVLPLYTNLEKVNWSLLEAASDLYAGRWQSFRRVLLPLTLPGIIAGSIIVFIPSLGAYVTPDLMGGARVALLGNLLQQQFMTVRDWPFGSAISFIMMAVMLAATLVYFRVSAESERSAEMTVGRDK
>NZ_LN890655.1|WP_095044877.1|2310276_2311008_-|ABC-transporter-permease
MGIFLFLYLPIIILVIYSFSGGNNVGVWTGFSTRWYAELLSDRALISAFRVSLWVALWSTLISTVLGTLAAMALERYRFFGRLPFDTVLYLPIIIPDIVMALSTLLFFVTFAVPLSRYTILVTHVAFNVAFVAVVVRARLAEMDASLEEAAADLGANAWTTFRRVTMPILMPGIVSGALLAFTLSLDDFVITFFVAGPGSTTLPVRVYSMIKFGVTPEVNAISTLMLVGSTVLVVISLLLQRK
>NZ_LN890655.1|WP_095043372.1|2309000_2310146_-|spermidine/putrescine-ABC-transporter-substrate-binding-protein
MKKVIGLVILIGLLAVACGGGPAGGPGAAEGGEPTAAVAEGEVQLAPELSVYNWADYIDEQILADYTERYGVEIIYDTFASNEDLLTKLQAGASGYDIIIPSDYMVAQMIELGLLAEIDVATLPNFANIGAEFKDPPYDPGNAHCTPYQWGMTGIGYRNGNPAFADGPPNSWAYLFEPSLLEQTAPEGINVLNDQRELMAAALFFLGHSPNSTDRAELEAARDLILQAKPYWKTFNSEDYYSTLMESDEIILSHAWSGDAAQAFWSTYDDATGEGNWLFTVPVEGAVRYQDNVCIPANSQRIETALHFMNYLMEAEVAAAITNFTFYPSPNEAAKEFINPDILNNPGIFPPPEVAAKLQWLTDVGDAIFIYDEMWTAIKGQ
>NZ_LN890655.1|WP_095043371.1|2307983_2308961_+|deoxyhypusine-synthase-family-protein
MTDAPISRFLRHHYRHFNAAAVIDAADGYVRHLDGGGAMMITLAGAMSTAELGLSLAEMIRRDKVQAISCTGANLEEDLFNLVAHDYYERVPHYRDLTPADEHALLRRHMNRVTDTCIPEEEAMRRLESALVDEWTRADRAGERYFPHEFMYRALRSGVLEQYYQIDPRDSWMLAAAEKNLPMVVPGWEDSTMGNMFTGHVMSGDIKNVHTVRTGIEYMAELAGWYQATAATRSIGFFQIGGGIAGDFPICVVPMLHQDLGRTDVALWGYFCQIGDSTTSYGSYSGAVPNEKITWGKLGIDTPKYMIESDATIVAPLVFALVMGQ
>NZ_LN890655.1|WP_095043370.1|2307010_2308003_+|agmatinase
MAHEKNPALGGHLLAYAGVPTFMRQTPTRDLSGVDVAIVGVPFDSGATSFRGGTRFGPRHIRAASLALWGTHHIHGVAPTDALTIVDYGDVEIEMAYIEKSMDFITTEVGAALAQGAMVVALGGDHSISLPLLRAQAAAARNAGHGPLAVVHFDAHTDVEPGGYEHGTVFRHAIEEGLIDPTAYIQVGIRGSLFFPDDLNVARRLGARVLTIDDCFEMGIPAVIEAIRETVGDRRVYVTLDIDATDPAFAPGTGTPEPGGFSSYQMLQLMRGLKGLNLVGMDLVEVSPPYDQSDVTAILAANLVFEYLCLVALRRAGEQGSRGDYDRRTD
>NZ_LN890655.1|WP_095043369.1|2306422_2306929_+|S-adenosylmethionine-decarboxylase
MRDVYGLHLMMRVSNVRNRAALSDGETVNRFLVELVHELDMNVLAGPMVTEEAGEPQRAGYSGVIILYESHAAIHTYSNLGEAFLDVFSCKPYDVSRVERVMNRYFGTFEIVEQTTLGRGVHWGSNVEREMESWREQRPESAPDAAPALAPVGGRVRVPEFQPAGSFG
>NZ_LN890655.1|WP_095043368.1|2305911_2306226_+|EthD-family-reductase
MFKFVVIYYRVDDEAALEEFYSSTHLPLLEQLPGLQRLEVSRVTSQPFGRSRFHLMIETYFSSEAALREALLSRPGLEMMDALRPWSENKLIAWFYADSFAEER
>NZ_LN890655.1|WP_095043366.1|2303320_2303893_+|zinc-ribbon-domain-containing-protein
MTTFLTGLTLGSILLGGALVVIVVLYLARPFALPEDEAARVDRETIDGLLLRKDALLRDIRELDEDYEAAKVAPEMYRAARPKMVKQAAILMKQLDEAGYADTPTVAVDAQSVDAQIEAAVSRLRTPEQIDAQIEAAIRQTRQQPPAPATNGTTQYCPQCGRRVEPDERFCARCGRKLSEEPQPSQAARA
>NZ_LN890655.1|WP_095043365.1|2302715_2303300_+|TlpA-family-protein-disulfide-reductase
MTDTIQTTTTPAEAAPRRPFRWSMIALWLAVIAILAVLAWGLVNTNATRPEVGQVAPDFDVEFFDGYGWETRSVATLAEMRGRPVVLNFWASWCVECRYETDLLESAWQQYRDQGVVFLGVAYADVEPNSIAYMEEFGVTFPHAPDLGTDISQSYEITGVPETFFIDSDGVIRHVQIGPVTQQMLDELMPQLLN
>NZ_LN890655.1|WP_157913049.1|2302111_2302609_+|cytochrome-c-type-biogenesis-protein-CcmH
MTNIRKKSLFRWLFLALLLVLLPTAVYGQGEITDDEVNAVAKDVYCPVCESTPLDVCPTAACADWRELIRVKLAEGQSRDEILDYFARQYGEGVLANPPRRGASLVVLWILPFALVLVGLLLFSRLLRGLRTAAPAGAPPARPSAATGDPVLDDYISRVEREIEE
>NZ_LN890655.1|WP_095043373.1|2312799_2314005_-|ABC-transporter-ATP-binding-protein
MTDSFRVELRNVTKRFGEYAAVNDLSLMVRDGEFFSLIGPSGCGKTTTLRMIAGFEQPTEGEIFIGGQHVEGIPAHHRPVNTVFQNYALFPHMSVAANVAFGLEMSRVPTAEIRRRVAEALELVRLPQMAERKPRQLSGGQQQRVALARALVNRPQVLLLDEPLGALDLKLRRAMQIELKHIQTEVGITFIYVTHDQEEAMTMSDRIGIMSEGVLQQVGSPHEVYEKPINRFVADFIGETNFLPAAVARLETEEDYPMVTLQGGVRVLAANEGHDLRLEQPVTLTIRPERINLYPQGKVDVLKAESGLEAEELERILGAKMPGPVDMKEFLLAEPENVVLNGTLDEAYYIGTDTRFRVTLEGGASLVVRQQNYGSRYDMPFDVGSHVYVQWAAENAQILTD
>NZ_LN890655.1|WP_095043374.1|2314417_2316379_+|aldehyde-ferredoxin-oxidoreductase-family-protein
MLHGFAGQVLHVDLTERQLTIEQPDEAFYRLYPGGSLMGLYYLWRMTPPGIDAFDPRNTLTFALSAPTGLPVSGQSRCTATCKSPTTGGVADSQAGGFWPAELKFAGFDAIVIRGASPTPVYLWIHDGAAELRDATHLWGHFTHDVDKLLKSELGDDKIEIAQIGPAGEKLSLFAAVMNMSNRAWGRTGIGAVMGSKNLRAIAVRGAHQPVPADKKAVVALSRRGPKLMPTRGDVENLGRYGTADTVMGQQGGGGLPTNNWDSGVMAPAAAEAISGERLYLELLRGAEQGAQDKLGRDTCYACIVRCKRVVEAEYRDQAIVPQYGGPEYETIATFGSYCGVSDLRAISYANQLCNMYGVDSISCGATLSWAMECFEQGLLTLAETDGIALHYGDAEAMLLMLEKTLRREGFGDVLAEGSAGAADRLGKGHEYVLTVKGQELPAHMPHLKRSLGLIYAVNPFGADHQSSEHDPMYHPKLYEGTPEAPGYKRYLAQIGLATPTAPKAMNPEKVEFALLTQYNYSATDVLGYCQFVFGPAWQLYGPQDMADLLAAATGWDVGVADVQQIGRRRLNLMRAYNAREGLTRDQDTLPKKLFAKPLSGGRSDGLALDPAELEWAITHYFELAGWDVETGTPRRGTLEEVGLGWVAEELNL
>NZ_LN890655.1|WP_095043375.1|2316441_2316759_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MVIVETKVFTRQIEELLTDEAYKDLQTELVKRPEVGVLIPGGGGLRKMRWGYQGQGKRGGVRVIYYWAAKQKRILMLFIYPKNVRDNLSPAQLRALRSIVEAEYQ
>NZ_LN890655.1|WP_095044879.1|2316770_2317082_+|helix-turn-helix-domain-containing-protein
MSDELFSELLESVREGGAILRGESQGSRRFEIEAPDVKRIREGFALSQSEFAGMLGISIKTLQNWEQGRRTPHGPARVLLQVASMHPEAIWSVVHAGIQVKES
>NZ_LN890655.1|WP_095043376.1|2317124_2317511_+|nucleotidyltransferase-domain-containing-protein
MIKPLTSSLSEVLLVNESEAIEVFKNALCAELEHQLFEIWLFGSKARGEAIPDSDLDLLVVVRDLAPSIRWRIRELAADCSFDYDVLINTHILDQSGWEAHAGQKSTFWREIERDGVALIQTPQFTLA
>NZ_LN890655.1|WP_157913050.1|2317534_2317678_+|DUF2442-domain-containing-protein
MRVVNIKIVGDYTLRVEFDDGTAQTIDFAPVLHGYIFGPLRDLALFN
>NZ_LN890655.1|WP_157913051.1|2317678_2317843_+|hypothetical-protein
MRLDPEIHTLVWPNDADFDPATLYCWNEGDGAELAAWLAQTERASPRSTGRTTR
>NZ_LN890655.1|WP_162292469.1|2318044_2319361_+|CAP-domain-containing-protein
MTERLRGLLVIVFVGLLLLAACGGAGSEGGAAGGSDTTDAADSGNVAVSGVRVKDNAAMGSAPLVIPEGAAAGPAARGAAGQTSDVAGVCLSAAEGELARMVNEYRASLNLPALQISKSLSLVAQQHVWDTNNNKAAWPAAPAGKTCNLHTWSGVVNPALQQGTWTANCYTSDHANAQGMWNKPGEIAGFPGEGVENSFWSSGTASPAGALTAWKNSPGHNNVMTQQGGWGPMAAMGVGMSGGVAHLWLSSTADPAGEALLCGGGSAMDVPPTAVPTAVPTAVPPTATPVPPTAAPTEAAATVAATAEQPTAAPTAVPPTAVPPTVAPTAVPPTVAPPTGEILNQTGTIAAGGTGNHTFSITQGRAYTVVVSPSAALDADPAISCTMGNSTFSNTFDWSWEGEPETFTFTAPANGSCTVTVAGYGGTTGDYTITAGAQ
>NZ_LN890655.1|WP_157913053.1|2319424_2322199_+|hypothetical-protein
MKRIRQSLPLSIVTLILLAACRSQAGQAPPAALTMTATSAVVRGEESPTETAMPATTQPPRTATEVSAAGAGIIYSVPFEVRPDGFGFRNYGAGYPEGDFTIAELRAQFGDGVCARIDDDGELCIPTAEAQQWIDDRNADMAYGHCIGFTVTSYHFTQGNIQPAMFAPDADAPFDIAREAPIMRVIAANGSLYWVNSVWQSEVAGDPRAIIDALIDLGEPVDLSIFLPGLVGGHSLLAYGVAEIAPEQYHILVYDNNFPGQEAFVEVDYAANTWRYDQGAVNPDAPAVPYEGDATTQTLRFIPLSAYETATCPFCPADVEEADEGEAYTLLSFLGQGEVLVETTLGRIGQVAGALINEIPGAQFIFPRGQLSANGTPSMILPADVDLAVEFNGLERVSALGPNLSLVIDHLMPAEENNRLEVTPDEQGIDFQSGGEQSPTLNVTIRQAETAYRVTLLGGNFADGQGITIGAANDGEGLELRNRQAGLDDTTLLITRLTDEGEAIFATTALAIQEDGGVILDVGAWNGTGSLDLYADEDGDGSYDEQPDRLSNEPLVELLQNSDTTAGIVDNLAPFLGEAGMDSILMTLAEQALSGREIGEILQPLQLSNEQLVRLITVYALPVPELGELLFALRLEPERLDSVLEELALTDEAETELRASLADLALYEAIRLDWVFLNTDDLTQLIALLDERDLTAEQLTQLLARLNLSEAEIGQVLSGLQLSTANLVEIVEELGVAMPATPTPTPALIASQTVTVTITATVELISGTLTVTASPTPAITATTEVPGTPAGTPTPDPYPGELPLPTGTPAPYPYPDPYPGPQPSPTAGPSPYPGGPTPTPDFRSKAICAADDLRITAEEPTWPNDTVVEIWAGEELLLSGKIGPDGEPFVATFPGPGTWTALRLIAATEPKVVPFGTITCPVQP
>NZ_LN890655.1|WP_157913054.1|2322336_2322990_+|HAD-family-phosphatase
MKRTTVLFDMDGLMVDTEPLARAAWQRVVAPYGLTVADDVYERMLGRRTVESAQLMLDALPLPLSRDELVARKTAEYLRSLDGGVPVMPGLWVLLARIDALAIPWGVATSTPRRVAEIVLGKLGVVGRYAALAAGDEVAHGKPAPDIFLLAAARLGAPAAACLALEDSAAGCAAAAAAGMRVVAVPTEQADPDAFAGAYRRYASLSAVAADLELLLL

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Crispr_ID: NZ_LN890655_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_6

2634317-2644769

Unclear

Consensus_repeat	Method
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	PILER-CR
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CRISPRCasFinder
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CRT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	PILER-CR

142 spacers

cas4,cas2,cas1,WYL,cas3,cas8a4,cas7,cas5,cas6

The CRISPR arrays of NZ_LN890655_6

>merge|NZ_LN890655|6|2634317-2644769|PILER-CR,CRISPRCasFinder,CRT,PILER-CR
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGTAGCTACAAATTAAAGCCGTCGCCGGCTATGGGGTTACTGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGGCCGACAACGGCCGCGCCGTCGGCCCGGTAGATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAGAGAGACGGCCGTTGGGTGATTGTTGACCTTGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAATTAAAACCGCCCGCCGGTGGGAGGAGCTAACCCGGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGGTCGATCACTTCCTGGATGATGGCCACGATTGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGGCCGGAGGGGAGAGTTCCGTCACGCACGGGGCAGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATAGATGACCTGACCCCGGCGGAGGTGGCCTATTACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACTTGGCGTTGCGCTCATACTGCGGCGGCAGTTCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGCAGGGCATCGGCCGCGCCATGCTCGACCAACTGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGACTTACTACCGGCAGGGGAATACGACACTGATGATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGGCAGCTACATCGCCTTCGCCCGTCCCGTAGAGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCGCGGCTACTGGCATAGATGAGCGGCAACCCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGGCGTCGTCGACGTCGTTGGCGCGGATGGTGAGATCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGCTTGAGGCTACAGAAGGAGAAAGGGACTATTTACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGCAACCCCTACACCATCACGGAAGACCCGGCCCAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGATTTCGCCGCCTTTATCCAGCGCCTGGCCGCGCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGTGATTGTATCCGATCTGGAGCGTGATCAATTTAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGCTCTGGCGGCAGTTGGGTTGACTTCTACCATCACCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGGCTGCGGGGTGGTGTCGTCTCCCTGGTCAAGTATTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCGGCAATGCGGCGATAGTAGGCAATGCCTAGGTAGTTTCAGTACCCTCTATCGGGTCGGAGGCTGTGCAGCAATGGACGGCGGAGGCTGAGGGCTTCGCGCTGGGCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGTGCAGAACTCCGGGGTCACGGAGTTTCTTATCAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGAAAGAACGCCCGCCGGGCGCAGGAGGAGACACCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTATCTTCTTCGCCCAGCGAAAACGGACGTAGTGAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAATCGGTCTTGAATCAGGAAAAGGAAGCGCGGCAGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCAGGCAAGCCGACGCCCATCTTGCTACCGTCGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACACATACACCTCTTGTCAGATTGCCCCTTTTGCGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGCTCAGGCGGATGTTTAGCTGGTTGCTAGAGGAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCATCGAATTGGCTGATATAGCCGTTCATCGAATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTCGCCACATGTTCGCCCGTTCGTTTTTGCAGAACGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCTTGCCGCCGGGTTGCACTTCATTGTCACCCGGAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGCTATCGCGTCGGCGATTGAGGTTATGTCGTTTACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATACCGGCGGTGGGCAACACGGCGACGCTGTACGTCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGCCGCGCATGTGCGCCGATGGCTGCACGCCCGAAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGATGAGATACGAGGCGACAGGCAGGATGTCGGAGTAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCCCGGCTGACAGCCCAGAAAACGGCACAGCGCCGCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGGTCTTCGCCCACAATCAGCGAGGCCGCCTCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGCGGCTAAAGAGACGGCGCTGCTACTGAAAGCGGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGGTTAAATCGACCACTGGCGAGTTTGATATTGACGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGCCGATTCACGAGAGCGGCAACCGCAACTACGTGTCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCGGCCGTGCTATCGCCGCCCTACCCCCTGCCGTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGGTCGTGGCGCTCGTCGTCGGTCGGCTCATCGTTGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCTAACGCCTTGATTACCTGCGGATACCCGCTTTAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTACCCGCCCCTGTCGCTGGCTGAGCTATGCGAGATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAAGCGGCAGCCGCGACTGGGGATACCCCGGCGACCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGCACGATCCCCGTCACCGCTGTCGCAAACGCCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGAGCACGACGACGTGGCAGTTTGCGGCGCTGGTGGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTGTGACGCATCCCCACGATGGCGTTCGCAGCCTCCTCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATCGCCGGCGTAACCACCTTGTCCCAGCGCGTACTCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCTGTCCTTCAAATACTCAACCAGCGCTCTGGCCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTACCGGCTTCAGGCGACGATTATAAACCTGACAACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACCAAACCGCCAACGCCAGCACCTATGCTGAGTTGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTTACCTCCTCCTGTTCTTCGTCAGCCTTCTCTATGACCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGCGATTCCGGGAGATCATCGACAGTCTCTACACCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGACCGGCGTCAATCAGACGACGCCAATCGGCACTTCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGCTGTGCCCGGCCTGCGGCCGGGGCACGATGGACTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGAAACTCAGTGGAAACCCAGAAGAAACCCAGTCCAGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCACCACCCACTGCCCCCGGTTGGCGTTGTCCTCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCAGGGTCACGTCAATTGTCCAGAATCGCCAGCCCGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCCAGCGCGAGCACGTCATACGAGTCGCCGTTCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTGATGGGCCTGTGGTCGTCCGCGCTGGGGTTGCACGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATCTCCGTGTCCAGATAGGCAGAAATGGCCGCCAGTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGTGGCTAACCGCGCCCAGGGGGGCAAGATTGAGGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGCAACCTGCTGTCGCGGACGCGCAGTCTGGAGCGTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGAAGAGGTCAAGCGCTGGAAGGCGCTGGCGGCCAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGTACGTTCTTGACGGGGGTGTGGACGGCGATTGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCGCATTCCCCGCGTTCGTCACCAGCGGCAGCCGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGCTCCACAGCCTCCGCCGTGATTTCCTGCCACTGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCCCCCTGGTCGTATGTCACCCTCCCCCGTGTCCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGTCATCATTCTTCTCTTCTGGATAAGAATACGGATCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGTCACCCAGGTGGCTATCATGGAGCAGGAAACGGCGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGCATACGCACCTGGTGCTGGCGTTCGCGGATACGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACCCTGAACGGCCACAACAACCGCTCCACCCCCATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATATGCGAGACGCAGAGCAATTGCAAATATCGAGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAGATCGTGGCGTCGGCGACCGACATCATCTCCCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGGGCAGGCAGGACAGGGCAGGACGGCAGGACGGCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAACCGCGATCACGGGCAAGGAACTCACCGATCACGTTCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGGACGGGGAAGTTCGCGGAGAGCATCCACATGGAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCTGCCGCGCCTGTGGCGTCAGGACGGCCAGTTCCTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTCGTCAGCCCCCGCCCCAGCGTATTCGCCTGATAAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCTTCCAACCGGTCAAGCCACCATGCAACATCTTCAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTATTAAGTTTGCGGGGGATGGGAGCAGTTCTTTTGAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACAGCTTCTGGAGTTCTATGGCGCGCCTTCCTCCCCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTTCAGCGACGACAACGAAGAGAAAGGCACCCCCACCATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGTAATCGAGCCGCCCGTCCCATAAGCGCTCACCGACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCTCAGCCGGGATGGTTTGTGGTAGCAATCAACGAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGTACCTCGAATGAGGCGTTGACGCCATCGAACCCATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGCCGGCGGATGACGCGCCGGCCGAGGAGTAAGACAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGCATTGTCCACGACCTGAATACGGACGAGATTATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGTCGCCGCCGCGCCGCCCAACGGCCAATAGTTCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCACGACAATCGCAATCACCAGCCCCACGACCGCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACAATTGAGACAACAACGGTAGACGCCGCTCCGACGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAACGGTGCGGGCCATGTCGGAGATAGTCAGACCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATCGACCGGCGTGCGGGTTTCGACGGCGCTGACTTCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAATACATCTCTTGCTCCTGTGTGTCAGAACCGACCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAATCCTCGTAAGTGACAGGGGGTATATTGGCCGTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGGGCAACCCGGCTCTATTGCGAAAAGCAATTGAACAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAAGCGAGCACAGGGTCGGGCGGTGTATCATGGCTTCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAACGGGATATGATTGACCGGCGGCGGCGCTGGGACAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATTGCCAGTTGACGCCGGTTGTCGATGACGACGCGCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCCTTTGCCTCTTCATAATCCCTGAAAGCATCTGCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGTCTGGACACAGGCGAGATATTTGGCGACCTGCAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACGACGCCGCCGCTGGTATGGGAGGGGATGTACCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACCGGCCGTCAGGGCGTCAAGCGTGGCCCGGTCATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCCACCGTCGCCGCGTCGAGGCTCGTATCATAGTTGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGTGCTTCGATTTTGCGCAGGGTGAATAGTAGGTCTAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATTACACCTAGCCGAACGCGACCCGCAACACCACGCTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGCCGGAAAGGTTCGCCGGTTTCATAATCGACATCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACACCGTGCCGTCGGTCTGCACGTACTCCGGCGCGAACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTTGCCTGACTGAATACCCGGTTGCGCCCCGTCACCCGGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAAGCGCCCATTCGTCCATTTCTACATCATGTACAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCCTCGTGTAAGCGGCCGATGCCGCTATACGACGACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTCTTCCTCCGAGTGGTATTCATACGAAATATCGGCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCATGCCACCCGATCCGCCGCCCCCGTGTAGGCCGACCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACCACGCCGCACACGATGTTGAATTCGATCGCGCAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGAAGGTTCGGATCGGTGATGCTGATTTTGCCGCCGTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACCGGGAAACCCGACCCCTTCTTTGCGCCAAGCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGAGATGCGGCGCGCCGGGCGACTGGAGGAGATTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGCCACGGCGCGAGACGGCGACGCCTTTCTGGAACTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTAACGAATCGGCTGCCATGAATCACATGAAAGTCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTTCCTTCCCGGATAACGTGGCTATTCGTTACGATAAAAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGACCGACACGTCCGGCTATCTGCAACTGTTCTCCCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCCAGGACGCCGGTCTCATCGGTCGCATGAGCCTGCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGTCGTGTCCTCGGCCATCTACGACGCGGCCAATGAGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTTCCCCTGCCCCCCGCCGCCGGTCTCAAGGACTCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCCGTCCCGGATTGTCGTCGACGAGCCGAGACTTTTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTCGCCGCCGCCTTTAGGACGCTGCGTAACCCGCGGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCTGACCTGTTCGCCGCGGCGGTCGATTTCCACGTATCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCATGGTGTTCTCCTTGCCGGGTACGACGCCCCCGGCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCAACCGGGCCACGATTTCGGCTTTGCGCTCTTCGATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGCGCAAGCCTTGCGCGACTATTTCGTCGGCGACTTCCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTCTATCTCGGAATGGATGATGAGAATCGGTGGTTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGTCCATGAGTAAGTCGCCGATCTCGTTCGCTTTTTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTGAGCGCGACGGCATCGCCGCCATGTATCGCGCTGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGGCCAACGCCGCGAGCGAACAGTTGGCCGTCATCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTCAGTCCGAGCCGGGTCAGCACCGGCTCGACGGTCTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGAGTTGATAACCGTTCGCGAAAAGCCAAGAGTGAGCGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCAGAATCTGATGCGGTCCGAGTTGACCATCCTGGAACGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACCACCGCGATTGGCGCAGCGTCGACCAACTCCAATGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCAGCGAGGAACAACGTTGAGGCCCTGCAGATTCTGCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC

>NZ_LN890655|6|1|2634317-2642862|PILER-CR
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGTAGC	TACAAATTAAAGCCGTCGCCGGCTATGGGGTTACTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGCCGACAACGGCCGCGCCGTCGGCCCGGTAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGAGAGACGGCCGTTGGGTGATTGTTGACCTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATTAAAACCGCCCGCCGGTGGGAGGAGCTAACCCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGTCGATCACTTCCTGGATGATGGCCACGATTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCCGGAGGGGAGAGTTCCGTCACGCACGGGGCAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATAGATGACCTGACCCCGGCGGAGGTGGCCTATTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACTTGGCGTTGCGCTCATACTGCGGCGGCAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCAGGGCATCGGCCGCGCCATGCTCGACCAACTGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACTTACTACCGGCAGGGGAATACGACACTGATGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGGCAGCTACATCGCCTTCGCCCGTCCCGTAGAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGCGGCTACTGGCATAGATGAGCGGCAACCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCGTCGTCGACGTCGTTGGCGCGGATGGTGAGATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCTTGAGGCTACAGAAGGAGAAAGGGACTATTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCAACCCCTACACCATCACGGAAGACCCGGCCCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATTTCGCCGCCTTTATCCAGCGCCTGGCCGCGCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGATTGTATCCGATCTGGAGCGTGATCAATTTAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCTGGCGGCAGTTGGGTTGACTTCTACCATCACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGCTGCGGGGTGGTGTCGTCTCCCTGGTCAAGTATTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGGCAATGCGGCGATAGTAGGCAATGCCTAGGTA
GTTTCAGTACCCTCTATCGGGTCGGAGGCTGTGCAGC	AATGGACGGCGGAGGCTGAGGGCTTCGCGCTGGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGCAGAACTCCGGGGTCACGGAGTTTCTTATCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAAAGAACGCCCGCCGGGCGCAGGAGGAGACACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATCTTCTTCGCCCAGCGAAAACGGACGTAGTGAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATCGGTCTTGAATCAGGAAAAGGAAGCGCGGCAGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCAGGCAAGCCGACGCCCATCTTGCTACCGTCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACACATACACCTCTTGTCAGATTGCCCCTTTTGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCTCAGGCGGATGTTTAGCTGGTTGCTAGAGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCATCGAATTGGCTGATATAGCCGTTCATCGAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCACATGTTCGCCCGTTCGTTTTTGCAGAACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTTGCCGCCGGGTTGCACTTCATTGTCACCCGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCTATCGCGTCGGCGATTGAGGTTATGTCGTTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATACCGGCGGTGGGCAACACGGCGACGCTGTACGTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCCGCGCATGTGCGCCGATGGCTGCACGCCCGAAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGAGATACGAGGCGACAGGCAGGATGTCGGAGTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCCGGCTGACAGCCCAGAAAACGGCACAGCGCCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGTCTTCGCCCACAATCAGCGAGGCCGCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCGGCTAAAGAGACGGCGCTGCTACTGAAAGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGTTAAATCGACCACTGGCGAGTTTGATATTGACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCCGATTCACGAGAGCGGCAACCGCAACTACGTGTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGGCCGTGCTATCGCCGCCCTACCCCCTGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGTCGTGGCGCTCGTCGTCGGTCGGCTCATCGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTAACGCCTTGATTACCTGCGGATACCCGCTTTAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TACCCGCCCCTGTCGCTGGCTGAGCTATGCGAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AAGCGGCAGCCGCGACTGGGGATACCCCGGCGACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCACGATCCCCGTCACCGCTGTCGCAAACGCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGCACGACGACGTGGCAGTTTGCGGCGCTGGTGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGTGACGCATCCCCACGATGGCGTTCGCAGCCTCCTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGCCGGCGTAACCACCTTGTCCCAGCGCGTACTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTGTCCTTCAAATACTCAACCAGCGCTCTGGCCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTACCGGCTTCAGGCGACGATTATAAACCTGACAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCAAACCGCCAACGCCAGCACCTATGCTGAGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTTACCTCCTCCTGTTCTTCGTCAGCCTTCTCTATGACCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCGATTCCGGGAGATCATCGACAGTCTCTACACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGGCGTCAATCAGACGACGCCAATCGGCACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCTGTGCCCGGCCTGCGGCCGGGGCACGATGGACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAACTCAGTGGAAACCCAGAAGAAACCCAGTCCAGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCACCACCCACTGCCCCCGGTTGGCGTTGTCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGGTCACGTCAATTGTCCAGAATCGCCAGCCCGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCCAGCGCGAGCACGTCATACGAGTCGCCGTTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGATGGGCCTGTGGTCGTCCGCGCTGGGGTTGCACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCTCCGTGTCCAGATAGGCAGAAATGGCCGCCAGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTGGCTAACCGCGCCCAGGGGGGCAAGATTGAGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCAACCTGCTGTCGCGGACGCGCAGTCTGGAGCGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGAAGAGGTCAAGCGCTGGAAGGCGCTGGCGGCCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTACGTTCTTGACGGGGGTGTGGACGGCGATTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGCATTCCCCGCGTTCGTCACCAGCGGCAGCCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCCACAGCCTCCGCCGTGATTTCCTGCCACTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCCCCTGGTCGTATGTCACCCTCCCCCGTGTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCATCATTCTTCTCTTCTGGATAAGAATACGGATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCACCCAGGTGGCTATCATGGAGCAGGAAACGGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGCATACGCACCTGGTGCTGGCGTTCGCGGATACGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCCTGAACGGCCACAACAACCGCTCCACCCCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATATGCGAGACGCAGAGCAATTGCAAATATCGAGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGATCGTGGCGTCGGCGACCGACATCATCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGGCAGGCAGGACAGGGCAGGACGGCAGGACGGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACCGCGATCACGGGCAAGGAACTCACCGATCACGTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGACGGGGAAGTTCGCGGAGAGCATCCACATGGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTGCCGCGCCTGTGGCGTCAGGACGGCCAGTTCCTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGTCAGCCCCCGCCCCAGCGTATTCGCCTGATAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTTCCAACCGGTCAAGCCACCATGCAACATCTTCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATTAAGTTTGCGGGGGATGGGAGCAGTTCTTTTGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAGCTTCTGGAGTTCTATGGCGCGCCTTCCTCCCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCAGCGACGACAACGAAGAGAAAGGCACCCCCACCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTAATCGAGCCGCCCGTCCCATAAGCGCTCACCGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTCAGCCGGGATGGTTTGTGGTAGCAATCAACGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGTACCTCGAATGAGGCGTTGACGCCATCGAACCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGCGGATGACGCGCCGGCCGAGGAGTAAGACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCATTGTCCACGACCTGAATACGGACGAGATTAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCGCCGCCGCGCCGCCCAACGGCCAATAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCACGACAATCGCAATCACCAGCCCCACGACCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAATTGAGACAACAACGGTAGACGCCGCTCCGACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAACGGTGCGGGCCATGTCGGAGATAGTCAGACCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGACCGGCGTGCGGGTTTCGACGGCGCTGACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATACATCTCTTGCTCCTGTGTGTCAGAACCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAATCCTCGTAAGTGACAGGGGGTATATTGGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGCAACCCGGCTCTATTGCGAAAAGCAATTGAACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGAGCACAGGGTCGGGCGGTGTATCATGGCTTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACGGGATATGATTGACCGGCGGCGGCGCTGGGACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTGCCAGTTGACGCCGGTTGTCGATGACGACGCGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCTTTGCCTCTTCATAATCCCTGAAAGCATCTGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCTGGACACAGGCGAGATATTTGGCGACCTGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACGACGCCGCCGCTGGTATGGGAGGGGATGTACCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGCCGTCAGGGCGTCAAGCGTGGCCCGGTCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCACCGTCGCCGCGTCGAGGCTCGTATCATAGTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTGCTTCGATTTTGCGCAGGGTGAATAGTAGGTCTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTACACCTAGCCGAACGCGACCCGCAACACCACGCTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGAAAGGTTCGCCGGTTTCATAATCGACATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACACCGTGCCGTCGGTCTGCACGTACTCCGGCGCGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTGCCTGACTGAATACCCGGTTGCGCCCCGTCACCCGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGCCCATTCGTCCATTTCTACATCATGTACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCTCGTGTAAGCGGCCGATGCCGCTATACGACGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTTCCTCCGAGTGGTATTCATACGAAATATCGGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGCCACCCGATCCGCCGCCCCCGTGTAGGCCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACGCCGCACACGATGTTGAATTCGATCGCGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAGGTTCGGATCGGTGATGCTGATTTTGCCGCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACCGGGAAACCCGACCCCTTCTTTGCGCCAAGCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGAGATGCGGCGCGCCGGGCGACTGGAGGAGATTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGCCACGGCGCGAGACGGCGACGCCTTTCTGGAACTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTAACGAATCGGCTGCCATGAATCACATGAAAGTCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCTTCCCGGATAACGTGGCTATTCGTTACGATAAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGACACGTCCGGCTATCTGCAACTGTTCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGACGCCGGTCTCATCGGTCGCATGAGCCTGCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCGTGTCCTCGGCCATCTACGACGCGGCCAATGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCCCTGCCCCCCGCCGCCGGTCTCAAGGACTCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCGTCCCGGATTGTCGTCGACGAGCCGAGACTTTTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCGCCGCCTTTAGGACGCTGCGTAACCCGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGACCTGTTCGCCGCGGCGGTCGATTTCCACGTATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGGTGTTCTCCTTGCCGGGTACGACGCCCCCGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCAACCGGGCCACGATTTCGGCTTTGCGCTCTTCGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCAAGCCTTGCGCGACTATTTCGTCGGCGACTTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCTATCTCGGAATGGATGATGAGAATCGGTGGTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCCATGAGTAAGTCGCCGATCTCGTTCGCTTTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGAGCGCGACGGCATCGCCGCCATGTATCGCGCTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGCCAACGCCGCGAGCGAACAGTTGGCCGTCATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCAGTCCGAGCCGGGTCAGCACCGGCTCGACGGTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGTTGATAACCGTTCGCGAAAAGCCAAGAGTGAGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGAATCTGATGCGGTCCGAGTTGACCATCCTGGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACCGCGATTGGCGCAGCGTCGACCAACTCCAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGCGAGGAACAACGTTGAGGCCCTGCAGATTCTGCA


>NZ_LN890655|6|6|2634317-2644769|CRISPRCasFinder
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGTAGC	TACAAATTAAAGCCGTCGCCGGCTATGGGGTTACTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGCCGACAACGGCCGCGCCGTCGGCCCGGTAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGAGAGACGGCCGTTGGGTGATTGTTGACCTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATTAAAACCGCCCGCCGGTGGGAGGAGCTAACCCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGTCGATCACTTCCTGGATGATGGCCACGATTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCCGGAGGGGAGAGTTCCGTCACGCACGGGGCAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATAGATGACCTGACCCCGGCGGAGGTGGCCTATTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACTTGGCGTTGCGCTCATACTGCGGCGGCAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCAGGGCATCGGCCGCGCCATGCTCGACCAACTGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACTTACTACCGGCAGGGGAATACGACACTGATGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGGCAGCTACATCGCCTTCGCCCGTCCCGTAGAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGCGGCTACTGGCATAGATGAGCGGCAACCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCGTCGTCGACGTCGTTGGCGCGGATGGTGAGATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCTTGAGGCTACAGAAGGAGAAAGGGACTATTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCAACCCCTACACCATCACGGAAGACCCGGCCCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATTTCGCCGCCTTTATCCAGCGCCTGGCCGCGCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGATTGTATCCGATCTGGAGCGTGATCAATTTAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCTGGCGGCAGTTGGGTTGACTTCTACCATCACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGCTGCGGGGTGGTGTCGTCTCCCTGGTCAAGTATTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGGCAATGCGGCGATAGTAGGCAATGCCTAGGTA
GTTTCAGTACCCTCTATCGGGTCGGAGGCTGTGCAGC	AATGGACGGCGGAGGCTGAGGGCTTCGCGCTGGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGCAGAACTCCGGGGTCACGGAGTTTCTTATCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAAAGAACGCCCGCCGGGCGCAGGAGGAGACACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATCTTCTTCGCCCAGCGAAAACGGACGTAGTGAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATCGGTCTTGAATCAGGAAAAGGAAGCGCGGCAGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCAGGCAAGCCGACGCCCATCTTGCTACCGTCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACACATACACCTCTTGTCAGATTGCCCCTTTTGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCTCAGGCGGATGTTTAGCTGGTTGCTAGAGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCATCGAATTGGCTGATATAGCCGTTCATCGAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCACATGTTCGCCCGTTCGTTTTTGCAGAACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTTGCCGCCGGGTTGCACTTCATTGTCACCCGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCTATCGCGTCGGCGATTGAGGTTATGTCGTTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATACCGGCGGTGGGCAACACGGCGACGCTGTACGTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCCGCGCATGTGCGCCGATGGCTGCACGCCCGAAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGAGATACGAGGCGACAGGCAGGATGTCGGAGTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCCGGCTGACAGCCCAGAAAACGGCACAGCGCCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGTCTTCGCCCACAATCAGCGAGGCCGCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCGGCTAAAGAGACGGCGCTGCTACTGAAAGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGTTAAATCGACCACTGGCGAGTTTGATATTGACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCCGATTCACGAGAGCGGCAACCGCAACTACGTGTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGGCCGTGCTATCGCCGCCCTACCCCCTGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGTCGTGGCGCTCGTCGTCGGTCGGCTCATCGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTAACGCCTTGATTACCTGCGGATACCCGCTTTAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TACCCGCCCCTGTCGCTGGCTGAGCTATGCGAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AAGCGGCAGCCGCGACTGGGGATACCCCGGCGACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCACGATCCCCGTCACCGCTGTCGCAAACGCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGCACGACGACGTGGCAGTTTGCGGCGCTGGTGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGTGACGCATCCCCACGATGGCGTTCGCAGCCTCCTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGCCGGCGTAACCACCTTGTCCCAGCGCGTACTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTGTCCTTCAAATACTCAACCAGCGCTCTGGCCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTACCGGCTTCAGGCGACGATTATAAACCTGACAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCAAACCGCCAACGCCAGCACCTATGCTGAGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTTACCTCCTCCTGTTCTTCGTCAGCCTTCTCTATGACCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCGATTCCGGGAGATCATCGACAGTCTCTACACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGGCGTCAATCAGACGACGCCAATCGGCACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCTGTGCCCGGCCTGCGGCCGGGGCACGATGGACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAACTCAGTGGAAACCCAGAAGAAACCCAGTCCAGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCACCACCCACTGCCCCCGGTTGGCGTTGTCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGGTCACGTCAATTGTCCAGAATCGCCAGCCCGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCCAGCGCGAGCACGTCATACGAGTCGCCGTTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGATGGGCCTGTGGTCGTCCGCGCTGGGGTTGCACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCTCCGTGTCCAGATAGGCAGAAATGGCCGCCAGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTGGCTAACCGCGCCCAGGGGGGCAAGATTGAGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCAACCTGCTGTCGCGGACGCGCAGTCTGGAGCGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGAAGAGGTCAAGCGCTGGAAGGCGCTGGCGGCCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTACGTTCTTGACGGGGGTGTGGACGGCGATTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGCATTCCCCGCGTTCGTCACCAGCGGCAGCCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCCACAGCCTCCGCCGTGATTTCCTGCCACTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCCCCTGGTCGTATGTCACCCTCCCCCGTGTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCATCATTCTTCTCTTCTGGATAAGAATACGGATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCACCCAGGTGGCTATCATGGAGCAGGAAACGGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGCATACGCACCTGGTGCTGGCGTTCGCGGATACGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCCTGAACGGCCACAACAACCGCTCCACCCCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATATGCGAGACGCAGAGCAATTGCAAATATCGAGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGATCGTGGCGTCGGCGACCGACATCATCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGGCAGGCAGGACAGGGCAGGACGGCAGGACGGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACCGCGATCACGGGCAAGGAACTCACCGATCACGTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGACGGGGAAGTTCGCGGAGAGCATCCACATGGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTGCCGCGCCTGTGGCGTCAGGACGGCCAGTTCCTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGTCAGCCCCCGCCCCAGCGTATTCGCCTGATAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTTCCAACCGGTCAAGCCACCATGCAACATCTTCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATTAAGTTTGCGGGGGATGGGAGCAGTTCTTTTGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAGCTTCTGGAGTTCTATGGCGCGCCTTCCTCCCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCAGCGACGACAACGAAGAGAAAGGCACCCCCACCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTAATCGAGCCGCCCGTCCCATAAGCGCTCACCGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTCAGCCGGGATGGTTTGTGGTAGCAATCAACGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGTACCTCGAATGAGGCGTTGACGCCATCGAACCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGCGGATGACGCGCCGGCCGAGGAGTAAGACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCATTGTCCACGACCTGAATACGGACGAGATTAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCGCCGCCGCGCCGCCCAACGGCCAATAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCACGACAATCGCAATCACCAGCCCCACGACCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAATTGAGACAACAACGGTAGACGCCGCTCCGACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAACGGTGCGGGCCATGTCGGAGATAGTCAGACCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGACCGGCGTGCGGGTTTCGACGGCGCTGACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATACATCTCTTGCTCCTGTGTGTCAGAACCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAATCCTCGTAAGTGACAGGGGGTATATTGGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGCAACCCGGCTCTATTGCGAAAAGCAATTGAACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGAGCACAGGGTCGGGCGGTGTATCATGGCTTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACGGGATATGATTGACCGGCGGCGGCGCTGGGACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTGCCAGTTGACGCCGGTTGTCGATGACGACGCGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCTTTGCCTCTTCATAATCCCTGAAAGCATCTGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCTGGACACAGGCGAGATATTTGGCGACCTGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACGACGCCGCCGCTGGTATGGGAGGGGATGTACCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGCCGTCAGGGCGTCAAGCGTGGCCCGGTCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCACCGTCGCCGCGTCGAGGCTCGTATCATAGTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTGCTTCGATTTTGCGCAGGGTGAATAGTAGGTCTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTACACCTAGCCGAACGCGACCCGCAACACCACGCTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGAAAGGTTCGCCGGTTTCATAATCGACATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACACCGTGCCGTCGGTCTGCACGTACTCCGGCGCGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTGCCTGACTGAATACCCGGTTGCGCCCCGTCACCCGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGCCCATTCGTCCATTTCTACATCATGTACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCTCGTGTAAGCGGCCGATGCCGCTATACGACGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTTCCTCCGAGTGGTATTCATACGAAATATCGGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGCCACCCGATCCGCCGCCCCCGTGTAGGCCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACGCCGCACACGATGTTGAATTCGATCGCGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAGGTTCGGATCGGTGATGCTGATTTTGCCGCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGGAAACCCGACCCCTTCTTTGCGCCAAGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAGATGCGGCGCGCCGGGCGACTGGAGGAGATTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCCACGGCGCGAGACGGCGACGCCTTTCTGGAACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TAACGAATCGGCTGCCATGAATCACATGAAAGTCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCTTCCCGGATAACGTGGCTATTCGTTACGATAAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGACACGTCCGGCTATCTGCAACTGTTCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGACGCCGGTCTCATCGGTCGCATGAGCCTGCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCGTGTCCTCGGCCATCTACGACGCGGCCAATGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCCCTGCCCCCCGCCGCCGGTCTCAAGGACTCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCGTCCCGGATTGTCGTCGACGAGCCGAGACTTTTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCGCCGCCTTTAGGACGCTGCGTAACCCGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGACCTGTTCGCCGCGGCGGTCGATTTCCACGTATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGGTGTTCTCCTTGCCGGGTACGACGCCCCCGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCAACCGGGCCACGATTTCGGCTTTGCGCTCTTCGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCAAGCCTTGCGCGACTATTTCGTCGGCGACTTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCTATCTCGGAATGGATGATGAGAATCGGTGGTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCCATGAGTAAGTCGCCGATCTCGTTCGCTTTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGAGCGCGACGGCATCGCCGCCATGTATCGCGCTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGCCAACGCCGCGAGCGAACAGTTGGCCGTCATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCAGTCCGAGCCGGGTCAGCACCGGCTCGACGGTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGTTGATAACCGTTCGCGAAAAGCCAAGAGTGAGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGAATCTGATGCGGTCCGAGTTGACCATCCTGGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACCGCGATTGGCGCAGCGTCGACCAACTCCAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGCGAGGAACAACGTTGAGGCCCTGCAGATTCTGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC

>NZ_LN890655|6|1|2634317-2644769|CRT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGTAGC	TACAAATTAAAGCCGTCGCCGGCTATGGGGTTACTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGCCGACAACGGCCGCGCCGTCGGCCCGGTAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGAGAGACGGCCGTTGGGTGATTGTTGACCTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATTAAAACCGCCCGCCGGTGGGAGGAGCTAACCCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGTCGATCACTTCCTGGATGATGGCCACGATTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCCGGAGGGGAGAGTTCCGTCACGCACGGGGCAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATAGATGACCTGACCCCGGCGGAGGTGGCCTATTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACTTGGCGTTGCGCTCATACTGCGGCGGCAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCAGGGCATCGGCCGCGCCATGCTCGACCAACTGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACTTACTACCGGCAGGGGAATACGACACTGATGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGGCAGCTACATCGCCTTCGCCCGTCCCGTAGAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGCGGCTACTGGCATAGATGAGCGGCAACCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCGTCGTCGACGTCGTTGGCGCGGATGGTGAGATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCTTGAGGCTACAGAAGGAGAAAGGGACTATTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCAACCCCTACACCATCACGGAAGACCCGGCCCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATTTCGCCGCCTTTATCCAGCGCCTGGCCGCGCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGATTGTATCCGATCTGGAGCGTGATCAATTTAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCTGGCGGCAGTTGGGTTGACTTCTACCATCACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGCTGCGGGGTGGTGTCGTCTCCCTGGTCAAGTATTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGGCAATGCGGCGATAGTAGGCAATGCCTAGGTA
GTTTCAGTACCCTCTATCGGGTCGGAGGCTGTGCAGC	AATGGACGGCGGAGGCTGAGGGCTTCGCGCTGGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGCAGAACTCCGGGGTCACGGAGTTTCTTATCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAAAGAACGCCCGCCGGGCGCAGGAGGAGACACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATCTTCTTCGCCCAGCGAAAACGGACGTAGTGAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATCGGTCTTGAATCAGGAAAAGGAAGCGCGGCAGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCAGGCAAGCCGACGCCCATCTTGCTACCGTCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACACATACACCTCTTGTCAGATTGCCCCTTTTGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCTCAGGCGGATGTTTAGCTGGTTGCTAGAGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCATCGAATTGGCTGATATAGCCGTTCATCGAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCACATGTTCGCCCGTTCGTTTTTGCAGAACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTTGCCGCCGGGTTGCACTTCATTGTCACCCGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCTATCGCGTCGGCGATTGAGGTTATGTCGTTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATACCGGCGGTGGGCAACACGGCGACGCTGTACGTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCCGCGCATGTGCGCCGATGGCTGCACGCCCGAAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGAGATACGAGGCGACAGGCAGGATGTCGGAGTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCCGGCTGACAGCCCAGAAAACGGCACAGCGCCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGTCTTCGCCCACAATCAGCGAGGCCGCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCGGCTAAAGAGACGGCGCTGCTACTGAAAGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGTTAAATCGACCACTGGCGAGTTTGATATTGACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCCGATTCACGAGAGCGGCAACCGCAACTACGTGTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGGCCGTGCTATCGCCGCCCTACCCCCTGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGTCGTGGCGCTCGTCGTCGGTCGGCTCATCGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTAACGCCTTGATTACCTGCGGATACCCGCTTTAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TACCCGCCCCTGTCGCTGGCTGAGCTATGCGAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AAGCGGCAGCCGCGACTGGGGATACCCCGGCGACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCACGATCCCCGTCACCGCTGTCGCAAACGCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGCACGACGACGTGGCAGTTTGCGGCGCTGGTGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGTGACGCATCCCCACGATGGCGTTCGCAGCCTCCTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGCCGGCGTAACCACCTTGTCCCAGCGCGTACTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTGTCCTTCAAATACTCAACCAGCGCTCTGGCCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTACCGGCTTCAGGCGACGATTATAAACCTGACAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCAAACCGCCAACGCCAGCACCTATGCTGAGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTTACCTCCTCCTGTTCTTCGTCAGCCTTCTCTATGACCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCGATTCCGGGAGATCATCGACAGTCTCTACACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGGCGTCAATCAGACGACGCCAATCGGCACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCTGTGCCCGGCCTGCGGCCGGGGCACGATGGACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAACTCAGTGGAAACCCAGAAGAAACCCAGTCCAGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCACCACCCACTGCCCCCGGTTGGCGTTGTCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGGTCACGTCAATTGTCCAGAATCGCCAGCCCGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCCAGCGCGAGCACGTCATACGAGTCGCCGTTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGATGGGCCTGTGGTCGTCCGCGCTGGGGTTGCACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCTCCGTGTCCAGATAGGCAGAAATGGCCGCCAGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTGGCTAACCGCGCCCAGGGGGGCAAGATTGAGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCAACCTGCTGTCGCGGACGCGCAGTCTGGAGCGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGAAGAGGTCAAGCGCTGGAAGGCGCTGGCGGCCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTACGTTCTTGACGGGGGTGTGGACGGCGATTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGCATTCCCCGCGTTCGTCACCAGCGGCAGCCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCCACAGCCTCCGCCGTGATTTCCTGCCACTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCCCCTGGTCGTATGTCACCCTCCCCCGTGTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCATCATTCTTCTCTTCTGGATAAGAATACGGATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCACCCAGGTGGCTATCATGGAGCAGGAAACGGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGCATACGCACCTGGTGCTGGCGTTCGCGGATACGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCCTGAACGGCCACAACAACCGCTCCACCCCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATATGCGAGACGCAGAGCAATTGCAAATATCGAGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGATCGTGGCGTCGGCGACCGACATCATCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGGCAGGCAGGACAGGGCAGGACGGCAGGACGGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACCGCGATCACGGGCAAGGAACTCACCGATCACGTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGACGGGGAAGTTCGCGGAGAGCATCCACATGGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTGCCGCGCCTGTGGCGTCAGGACGGCCAGTTCCTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGTCAGCCCCCGCCCCAGCGTATTCGCCTGATAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTTCCAACCGGTCAAGCCACCATGCAACATCTTCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATTAAGTTTGCGGGGGATGGGAGCAGTTCTTTTGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAGCTTCTGGAGTTCTATGGCGCGCCTTCCTCCCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCAGCGACGACAACGAAGAGAAAGGCACCCCCACCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTAATCGAGCCGCCCGTCCCATAAGCGCTCACCGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTCAGCCGGGATGGTTTGTGGTAGCAATCAACGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGTACCTCGAATGAGGCGTTGACGCCATCGAACCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGCGGATGACGCGCCGGCCGAGGAGTAAGACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCATTGTCCACGACCTGAATACGGACGAGATTAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCGCCGCCGCGCCGCCCAACGGCCAATAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCACGACAATCGCAATCACCAGCCCCACGACCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAATTGAGACAACAACGGTAGACGCCGCTCCGACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAACGGTGCGGGCCATGTCGGAGATAGTCAGACCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGACCGGCGTGCGGGTTTCGACGGCGCTGACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATACATCTCTTGCTCCTGTGTGTCAGAACCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAATCCTCGTAAGTGACAGGGGGTATATTGGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGCAACCCGGCTCTATTGCGAAAAGCAATTGAACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGAGCACAGGGTCGGGCGGTGTATCATGGCTTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACGGGATATGATTGACCGGCGGCGGCGCTGGGACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTGCCAGTTGACGCCGGTTGTCGATGACGACGCGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCTTTGCCTCTTCATAATCCCTGAAAGCATCTGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCTGGACACAGGCGAGATATTTGGCGACCTGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACGACGCCGCCGCTGGTATGGGAGGGGATGTACCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGCCGTCAGGGCGTCAAGCGTGGCCCGGTCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCACCGTCGCCGCGTCGAGGCTCGTATCATAGTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTGCTTCGATTTTGCGCAGGGTGAATAGTAGGTCTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTACACCTAGCCGAACGCGACCCGCAACACCACGCTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGAAAGGTTCGCCGGTTTCATAATCGACATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACACCGTGCCGTCGGTCTGCACGTACTCCGGCGCGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTGCCTGACTGAATACCCGGTTGCGCCCCGTCACCCGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGCCCATTCGTCCATTTCTACATCATGTACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCTCGTGTAAGCGGCCGATGCCGCTATACGACGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTTCCTCCGAGTGGTATTCATACGAAATATCGGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGCCACCCGATCCGCCGCCCCCGTGTAGGCCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACGCCGCACACGATGTTGAATTCGATCGCGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAGGTTCGGATCGGTGATGCTGATTTTGCCGCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGGAAACCCGACCCCTTCTTTGCGCCAAGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAGATGCGGCGCGCCGGGCGACTGGAGGAGATTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCCACGGCGCGAGACGGCGACGCCTTTCTGGAACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TAACGAATCGGCTGCCATGAATCACATGAAAGTCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCTTCCCGGATAACGTGGCTATTCGTTACGATAAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGACACGTCCGGCTATCTGCAACTGTTCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGACGCCGGTCTCATCGGTCGCATGAGCCTGCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCGTGTCCTCGGCCATCTACGACGCGGCCAATGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCCCTGCCCCCCGCCGCCGGTCTCAAGGACTCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCGTCCCGGATTGTCGTCGACGAGCCGAGACTTTTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCGCCGCCTTTAGGACGCTGCGTAACCCGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGACCTGTTCGCCGCGGCGGTCGATTTCCACGTATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGGTGTTCTCCTTGCCGGGTACGACGCCCCCGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCAACCGGGCCACGATTTCGGCTTTGCGCTCTTCGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCAAGCCTTGCGCGACTATTTCGTCGGCGACTTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCTATCTCGGAATGGATGATGAGAATCGGTGGTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCCATGAGTAAGTCGCCGATCTCGTTCGCTTTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGAGCGCGACGGCATCGCCGCCATGTATCGCGCTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGCCAACGCCGCGAGCGAACAGTTGGCCGTCATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCAGTCCGAGCCGGGTCAGCACCGGCTCGACGGTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGTTGATAACCGTTCGCGAAAAGCCAAGAGTGAGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGAATCTGATGCGGTCCGAGTTGACCATCCTGGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACCGCGATTGGCGCAGCGTCGACCAACTCCAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGCGAGGAACAACGTTGAGGCCCTGCAGATTCTGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC

>NZ_LN890655|6|2|2643265-2644769|PILER-CR
	TACAAATTAAAGCCGTCGCCGGCTATGGGGTTACTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGCCGACAACGGCCGCGCCGTCGGCCCGGTAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGAGAGACGGCCGTTGGGTGATTGTTGACCTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATTAAAACCGCCCGCCGGTGGGAGGAGCTAACCCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGTCGATCACTTCCTGGATGATGGCCACGATTGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCCGGAGGGGAGAGTTCCGTCACGCACGGGGCAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATAGATGACCTGACCCCGGCGGAGGTGGCCTATTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACTTGGCGTTGCGCTCATACTGCGGCGGCAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCAGGGCATCGGCCGCGCCATGCTCGACCAACTGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACTTACTACCGGCAGGGGAATACGACACTGATGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGGCAGCTACATCGCCTTCGCCCGTCCCGTAGAGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGCGGCTACTGGCATAGATGAGCGGCAACCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGCGTCGTCGACGTCGTTGGCGCGGATGGTGAGATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCTTGAGGCTACAGAAGGAGAAAGGGACTATTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCAACCCCTACACCATCACGGAAGACCCGGCCCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATTTCGCCGCCTTTATCCAGCGCCTGGCCGCGCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGATTGTATCCGATCTGGAGCGTGATCAATTTAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCTGGCGGCAGTTGGGTTGACTTCTACCATCACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGCTGCGGGGTGGTGTCGTCTCCCTGGTCAAGTATTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCGGCAATGCGGCGATAGTAGGCAATGCCTAGGTA
GTTTCAGTACCCTCTATCGGGTCGGAGGCTGTGCAGC	AATGGACGGCGGAGGCTGAGGGCTTCGCGCTGGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGTGCAGAACTCCGGGGTCACGGAGTTTCTTATCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGAAAGAACGCCCGCCGGGCGCAGGAGGAGACACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATCTTCTTCGCCCAGCGAAAACGGACGTAGTGAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATCGGTCTTGAATCAGGAAAAGGAAGCGCGGCAGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCAGGCAAGCCGACGCCCATCTTGCTACCGTCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACACATACACCTCTTGTCAGATTGCCCCTTTTGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGCTCAGGCGGATGTTTAGCTGGTTGCTAGAGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCATCGAATTGGCTGATATAGCCGTTCATCGAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCACATGTTCGCCCGTTCGTTTTTGCAGAACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTTGCCGCCGGGTTGCACTTCATTGTCACCCGGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCTATCGCGTCGGCGATTGAGGTTATGTCGTTTAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATACCGGCGGTGGGCAACACGGCGACGCTGTACGTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCCGCGCATGTGCGCCGATGGCTGCACGCCCGAAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GATGAGATACGAGGCGACAGGCAGGATGTCGGAGTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCCGGCTGACAGCCCAGAAAACGGCACAGCGCCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGGTCTTCGCCCACAATCAGCGAGGCCGCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCGGCTAAAGAGACGGCGCTGCTACTGAAAGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGTTAAATCGACCACTGGCGAGTTTGATATTGACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCCGATTCACGAGAGCGGCAACCGCAACTACGTGTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGGCCGTGCTATCGCCGCCCTACCCCCTGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGGTCGTGGCGCTCGTCGTCGGTCGGCTCATCGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTAACGCCTTGATTACCTGCGGATACCCGCTTTAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TACCCGCCCCTGTCGCTGGCTGAGCTATGCGAGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AAGCGGCAGCCGCGACTGGGGATACCCCGGCGACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCACGATCCCCGTCACCGCTGTCGCAAACGCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGCACGACGACGTGGCAGTTTGCGGCGCTGGTGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGTGACGCATCCCCACGATGGCGTTCGCAGCCTCCTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGCCGGCGTAACCACCTTGTCCCAGCGCGTACTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTGTCCTTCAAATACTCAACCAGCGCTCTGGCCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTACCGGCTTCAGGCGACGATTATAAACCTGACAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCAAACCGCCAACGCCAGCACCTATGCTGAGTTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTTACCTCCTCCTGTTCTTCGTCAGCCTTCTCTATGACCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCGATTCCGGGAGATCATCGACAGTCTCTACACCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGGCGTCAATCAGACGACGCCAATCGGCACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCTGTGCCCGGCCTGCGGCCGGGGCACGATGGACT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAACTCAGTGGAAACCCAGAAGAAACCCAGTCCAGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCACCACCCACTGCCCCCGGTTGGCGTTGTCCTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGGTCACGTCAATTGTCCAGAATCGCCAGCCCGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCCAGCGCGAGCACGTCATACGAGTCGCCGTTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGATGGGCCTGTGGTCGTCCGCGCTGGGGTTGCACGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCTCCGTGTCCAGATAGGCAGAAATGGCCGCCAGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTGGCTAACCGCGCCCAGGGGGGCAAGATTGAGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGCAACCTGCTGTCGCGGACGCGCAGTCTGGAGCGTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGAAGAGGTCAAGCGCTGGAAGGCGCTGGCGGCCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTACGTTCTTGACGGGGGTGTGGACGGCGATTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCGCATTCCCCGCGTTCGTCACCAGCGGCAGCCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGCTCCACAGCCTCCGCCGTGATTTCCTGCCACTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCCCCTGGTCGTATGTCACCCTCCCCCGTGTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCATCATTCTTCTCTTCTGGATAAGAATACGGATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCACCCAGGTGGCTATCATGGAGCAGGAAACGGCGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACGCATACGCACCTGGTGCTGGCGTTCGCGGATACGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCCTGAACGGCCACAACAACCGCTCCACCCCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATATGCGAGACGCAGAGCAATTGCAAATATCGAGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGATCGTGGCGTCGGCGACCGACATCATCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGGCAGGCAGGACAGGGCAGGACGGCAGGACGGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACCGCGATCACGGGCAAGGAACTCACCGATCACGTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGGACGGGGAAGTTCGCGGAGAGCATCCACATGGA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTGCCGCGCCTGTGGCGTCAGGACGGCCAGTTCCTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGTCAGCCCCCGCCCCAGCGTATTCGCCTGATAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCTTCCAACCGGTCAAGCCACCATGCAACATCTTCAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TATTAAGTTTGCGGGGGATGGGAGCAGTTCTTTTGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAGCTTCTGGAGTTCTATGGCGCGCCTTCCTCCCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCAGCGACGACAACGAAGAGAAAGGCACCCCCACCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTAATCGAGCCGCCCGTCCCATAAGCGCTCACCGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCTCAGCCGGGATGGTTTGTGGTAGCAATCAACGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CGTACCTCGAATGAGGCGTTGACGCCATCGAACCCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGCGGATGACGCGCCGGCCGAGGAGTAAGACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGCATTGTCCACGACCTGAATACGGACGAGATTAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCGCCGCCGCGCCGCCCAACGGCCAATAGTTCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCACGACAATCGCAATCACCAGCCCCACGACCGCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACAATTGAGACAACAACGGTAGACGCCGCTCCGACGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAACGGTGCGGGCCATGTCGGAGATAGTCAGACCCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATCGACCGGCGTGCGGGTTTCGACGGCGCTGACTTC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AATACATCTCTTGCTCCTGTGTGTCAGAACCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAATCCTCGTAAGTGACAGGGGGTATATTGGCCGTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GGGCAACCCGGCTCTATTGCGAAAAGCAATTGAACA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGAGCACAGGGTCGGGCGGTGTATCATGGCTTCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AACGGGATATGATTGACCGGCGGCGGCGCTGGGACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTGCCAGTTGACGCCGGTTGTCGATGACGACGCGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCTTTGCCTCTTCATAATCCCTGAAAGCATCTGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCTGGACACAGGCGAGATATTTGGCGACCTGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACGACGCCGCCGCTGGTATGGGAGGGGATGTACCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACCGGCCGTCAGGGCGTCAAGCGTGGCCCGGTCAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCACCGTCGCCGCGTCGAGGCTCGTATCATAGTTGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTGCTTCGATTTTGCGCAGGGTGAATAGTAGGTCTA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ATTACACCTAGCCGAACGCGACCCGCAACACCACGCTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCCGGAAAGGTTCGCCGGTTTCATAATCGACATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CACACCGTGCCGTCGGTCTGCACGTACTCCGGCGCGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTGCCTGACTGAATACCCGGTTGCGCCCCGTCACCCGGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAAGCGCCCATTCGTCCATTTCTACATCATGTACAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCCTCGTGTAAGCGGCCGATGCCGCTATACGACGAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTCTTCCTCCGAGTGGTATTCATACGAAATATCGGCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGCCACCCGATCCGCCGCCCCCGTGTAGGCCGACC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACGCCGCACACGATGTTGAATTCGATCGCGCAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAAGGTTCGGATCGGTGATGCTGATTTTGCCGCCGT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCACCGGGAAACCCGACCCCTTCTTTGCGCCAAGCCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCACGAGATGCGGCGCGCCGGGCGACTGGAGGAGATTGGGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCCGCCACGGCGCGAGACGGCGACGCCTTTCTGGAACTGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCGATGGATTGAGTGTGCTACCGCCCGCGCCGACCACGCGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGCTAACGAATCGGCTGCCATGAATCACATGAAAGTCCAGTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCTTCCCGGATAACGTGGCTATTCGTTACGATAAAA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GACCGACACGTCCGGCTATCTGCAACTGTTCTCCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CCAGGACGCCGGTCTCATCGGTCGCATGAGCCTGCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GTCGTGTCCTCGGCCATCTACGACGCGGCCAATGAG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TTCCCCTGCCCCCCGCCGCCGGTCTCAAGGACTCC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCCGTCCCGGATTGTCGTCGACGAGCCGAGACTTTTGG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCGCCGCCGCCTTTAGGACGCTGCGTAACCCGCGGC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CTGACCTGTTCGCCGCGGCGGTCGATTTCCACGTATC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CATGGTGTTCTCCTTGCCGGGTACGACGCCCCCGGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCAACCGGGCCACGATTTCGGCTTTGCGCTCTTCGAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GCGCAAGCCTTGCGCGACTATTTCGTCGGCGACTTCCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCTATCTCGGAATGGATGATGAGAATCGGTGGTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGTCCATGAGTAAGTCGCCGATCTCGTTCGCTTTTT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TGAGCGCGACGGCATCGCCGCCATGTATCGCGCTG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGGCCAACGCCGCGAGCGAACAGTTGGCCGTCATCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	TCAGTCCGAGCCGGGTCAGCACCGGCTCGACGGTCT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	GAGTTGATAACCGTTCGCGAAAAGCCAAGAGTGAGCG
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	AGAATCTGATGCGGTCCGAGTTGACCATCCTGGAAC
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	ACCACCGCGATTGGCGCAGCGTCGACCAACTCCAAT
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC	CAGCGAGGAACAACGTTGAGGCCCTGCAGATTCTGCA
GTTTCAGTACCCTCTATCGGGTCGAAGGCTGTGCAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095043654.1\|2615258_2616791_+\|DUF1269-domain-containing-protein	unknown	unknown	gnl\|CDD\|227140
NZ_LN890655.1\|WP_095043658.1\|2625198_2627388_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095043668.1\|2654533_2655256_+\|hypothetical-protein	cas5	cls000048_cas5_CAS-I-A	unknown
NZ_LN890655.1\|WP_157913106.1\|2647522_2647759_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095043652.1\|2611330_2613067_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|223733
NZ_LN890655.1\|WP_095043662.1\|2645593_2645869_-\|CRISPR-associated-endonuclease-Cas2	cas2	pfam09827_cas2_CAS-I:CAS-II:CAS-III	gnl\|CDD\|378256
NZ_LN890655.1\|WP_095043661.1\|2644982_2645594_-\|CRISPR-associated-protein-Cas4	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_LN890655.1\|WP_095043653.1\|2613120_2615262_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377198
NZ_LN890655.1\|WP_095043655.1\|2618280_2619531_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_173776337.1\|2616787_2617732_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|187579
NZ_LN890655.1\|WP_095043656.1\|2619552_2623530_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095043663.1\|2646120_2647164_-\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187766
NZ_LN890655.1\|WP_095043666.1\|2648861_2651315_+\|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|273707
NZ_LN890655.1\|WP_157913105.1\|2631601_2634205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_157913107.1\|2651748_2653536_+\|hypothetical-protein	cas8a4	cls000706_cas8a4_CAS-I-A	unknown
NZ_LN890655.1\|WP_095043665.1\|2647806_2648862_+\|WYL-domain-containing-transcriptional-regulator	WYL	pfam13280_WYL_CAS-I:CAS-III	gnl\|CDD\|379100
NZ_LN890655.1\|WP_095044888.1\|2653549_2654527_+\|DevR-family-CRISPR-associated-autoregulator	cas7	pfam01905_cas7_CAS-I	gnl\|CDD\|376656
NZ_LN890655.1\|WP_095043657.1\|2623560_2625114_+\|tail-fiber-protein	unknown	unknown	gnl\|CDD\|227020
NZ_LN890655.1\|WP_095043659.1\|2627416_2631568_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237865
NZ_LN890655.1\|WP_095043669.1\|2655286_2656318_+\|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6	cas6	mkCas0066_cas6_CAS-I:CAS-III	unknown

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095043654.1\|2615258_2616791_+\|DUF1269-domain-containing-protein	gnl\|CDD\|227140	COG4803, COG4803, Predicted membrane protein [Function unknown].	6.60684e-17
NZ_LN890655.1\|WP_095043652.1\|2611330_2613067_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	2.88877e-107
NZ_LN890655.1\|WP_095043662.1\|2645593_2645869_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|378256	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2. Members of this family of bacterial proteins comprise various hypothetical proteins, as well as CRISPR (clustered regularly interspaced short palindromic repeats) associated proteins, conferring resistance to infection by certain bacteriophages.	1.01984e-12
NZ_LN890655.1\|WP_095043661.1\|2644982_2645594_-\|CRISPR-associated-protein-Cas4	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.25494e-27
NZ_LN890655.1\|WP_095043653.1\|2613120_2615262_+\|phage-holin-family-protein	gnl\|CDD\|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	1.44526e-27
NZ_LN890655.1\|WP_173776337.1\|2616787_2617732_+\|NAD(P)H-binding-protein	gnl\|CDD\|187579	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs. This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	4.80306e-35
NZ_LN890655.1\|WP_095043663.1\|2646120_2647164_-\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|187766	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	1.77184e-92
NZ_LN890655.1\|WP_095043666.1\|2648861_2651315_+\|CRISPR-associated-helicase-Cas3'	gnl\|CDD\|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.25511e-45
NZ_LN890655.1\|WP_095043665.1\|2647806_2648862_+\|WYL-domain-containing-transcriptional-regulator	gnl\|CDD\|379100	pfam13280, WYL, WYL domain. WYL is a Sm-like SH3 beta-barrel fold containing domain. It is a member of the WYL-like superfamily, named for three conserved amino acids found in a subset of the superfamily. However, these residues are not strongly conserved throughout the family. Rather, the conservation pattern includes four basic residues and a position often occupied by a cysteine, which are predicted to line a ligand-binding groove typical of the Sm-like SH3 beta-barrels. A WYL domain protein (sll7009) is a negative regulator of the I-D CRISPR-Cas system in Synechocystis sp. It is predicted to be a ligand-sensing domain that could bind negatively charged ligands, such as nucleotides or nucleic acid fragments, to regulate CRISPR-Cas and other defense systems such as the abortive infection AbiG system.	1.12458e-33
NZ_LN890655.1\|WP_095044888.1\|2653549_2654527_+\|DevR-family-CRISPR-associated-autoregulator	gnl\|CDD\|376656	pfam01905, DevR, CRISPR-associated negative auto-regulator DevR/Csa2. This group of families is one of several protein families that are always found associated with prokaryotic CRISPRs, themselves a family of clustered regularly interspaced short palindromic repeats, DNA repeats found in nearly half of all bacterial and archaeal genomes. These DNA repeat regions have a remarkably regular structure: unique sequences of constant size, called spacers, sit between each pair of repeats. It has been shown that the CRISPRs are virus-derived sequences acquired by the host to enable them to resist viral infection. The Cas proteins from the host use the CRISPRs to mediate an antiviral response. After transcription of the CRISPR, a complex of Cas proteins termed Cascade cleaves a CRISPR RNA precursor in each repeat and retains the cleavage products containing the virus-derived sequence. Assisted by the helicase Cas3, these mature CRISPR RNAs then serve as small guide RNAs that enable Cascade to interfere with virus proliferation. Cas5 contains an endonuclease motif, whose inactivation leads to loss of resistance, even in the presence of phage-derived spacers. This family used to be known as DUF73. DevR appears to be negative auto-regulator within the system.	2.96459e-78
NZ_LN890655.1\|WP_095043657.1\|2623560_2625114_+\|tail-fiber-protein	gnl\|CDD\|227020	COG4675, MdpB, Microcystin-dependent protein [Function unknown].	3.33649e-13
NZ_LN890655.1\|WP_095043659.1\|2627416_2631568_+\|hypothetical-protein	gnl\|CDD\|237865	PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional.	0.000448791

>NZ_LN890655.1|WP_157913105.1|2631601_2634205_+|hypothetical-protein
MPITADVYLEFIENHLPGLKAGKYRFSGKQTLGGPGIGDGDSFVLDLPAFQAKVAGERFTINPAEILTVFPPKNSLGHYATVLPHIAFKRDTLPWERLIAMSDKAELALRLDKTPWMALLVLNEDEILTDQGLPPASVEEYQQAEDGYVKTGNSLATGPVTGENWPPHLDDDENRDERFKVIYVRQESLQKLLADDKALAWLAHARRSRLRLTGVQANQLIKVYDDKHELIHQEVATGADASIDCGLLAAGSYTIEVDGTAIADQPLQLKPDDQVGGETAIVVANRLPQQGVKSVIHLVSLEDRYQVNDNGVFTFDFGGYDKAVPLVSLYSWSFTALTEKETFRHILLHLNHAFLFGVDTEPLPAALDVVSLRGAFFAGRNPLGDQAAIVDRAVKELSDKDQRYYVGQTGAIYNAAGRKIAEGNGTLPADGAAAIARIPNHRLHAKTVAFGDVKARQVWITDNNKQYFVSEVPWAKRLLVYLLPGDDTPSLRLPSREGSEPGVAIANSYLQQGYVPMPHQFRRGGKSVSWYRSPLLAGKPGRQIADEQFPVHTADELLRYDTANGLFDVSYAAAWELGRLLCLNNKRASLELYRWKRLHVRSLKTMEQRHLYPHLPLRSNVAGDMVLPEIVENWLADISLLKGLPFSYLVPDARMLPGESLRFFYLDPSWIASLLDGALSIGRVNKGHDTAVSKQALTDTGVFDSAQVISGFLLRSSVVKGWPDLQVNAYNGQPDVGAAGNSELACLRLERLSDNVLLGLFQGEVNVLDIHETPQTIHSGFYLDEADDASLRIIKYPLQADGQESAACLTLTGDNPLMDGGTRVIQPVALAAGLQAMGLGYTSFTSAQLALSLIEGVSRVRFIKDGG
>NZ_LN890655.1|WP_095043659.1|2627416_2631568_+|hypothetical-protein
MTTDQLTPEALQANLTQQGVDVSKISIQNNTLEISPPGVSVQKIGDFFRNTLGDIPELNSLLPASLPVGNVQLSHFKFTPTSDSGPYDVEITLSWPDLEWALIPGILALSHPEITIGVTGGSAYGDVAGDAQVEGVPLHLTLELPTTVLTASLPDTTPAPSAGKLLQGFQVTEPQGNGRAPAAIDLGVLSLEALSVLGNIEDSRLLLYLALGNIEFGPGDLTTQLTIDYIGGPNSQLSGQVWGQYDIHRKDSDDDTLFSIMLLAAYDGPGKSWKFEGGAAGADGDPVTISDLIEVFTDSADIPGIFNQVGISYLHLAYETGSGDFEFQCDVDVSDLFGAEATVAMIVDVHLHKVGQATGKSAQYAKTFSGRLLFTLADDMVLEFDLLFDQSPHGQATDTTFIAAYKNPSGGELNIGDLIGLVQPDIDVPLSIKLQDAFFIYDKRSGPPARGTYLFGLDIGSGIDLSALPLVGKLLDKDSGLTFGLQPLVALGTPDPATQIYFSQSDLTRLGGMIPGGGITLPAEDVKAQIGLGINIALGKDTSFHFNLPIKLNKQVQPAPTKTLPAAPPPIAATPPADNAPPPPLPTLPAPPPLNQPAQQAIATTNEPMSTSPATTGVTPAPAGSAASGIQWITIGKGFGPVQINRLGLQFEMARQMVWAYLDAGLSIGPLTFTLDGLGMGTPINTFAPEFRLLGIGIDYKAGPVEIGAAFLRTHVDEVLDANGQVVTPAYDEYSGLATIKTPTIGLSAVGSYSDLPEYKSLFIYAVLNAPLGGPAFFFVTGLAAGFGFNRAVKTPDITAVAQFPLVNLAVSGAGSGPPSGPGERTNYIHEILDQLRGSIYPMKGQYFLAAGIHFTSFELVDSFAMLLVSFGKHFEIDVLGLSTVVVPTPLPDGPAVTPVAEVQLALKAVFNPGDGFLSIEAQLTSNSFILDKNCHLTGGFAFYCWFGGPHQGDFVLSLGGFHPNFQKPDYYPTVPRLGLNWQVTPDLSIQGGIYFALTPHMVMAGGRLEALYQGGSLKAWFTLAADFLICWKPYHYDAHAMLDIGVEYTYHLFGTHHINVTVGADVHVWGPDFAGHAHIHLWCVTYDLDFGAATTPKLEPIDWATFRKSFLPEDTGKMVQLSVMAGLLRKEQVDAVEQHVINPRDFQLGVDLVVPYKALQIGARDVPLQSLRPVTVRGATQFAAFSEQPDGSYAPGPGEAPIATGAFGIAPMARSAGQLTSSLQLTAEMEDANGQWQPANELFSFRPVSKRVPRALWGETLQQDLNGERYVENVLSGLELIPATPPQPGETQWIAKQALQYSTSPVESGIGYESINAFTATALGADDSATGYIKAHLTDETTMTNRRQLLAALGFDYDRLGLDLRPSLADALVMEPQIGAFV
>NZ_LN890655.1|WP_095043658.1|2625198_2627388_+|hypothetical-protein
MPKTDALIALHTHLVKGGREDYAQVIPAKYAKLSAVDVYDRFVGVRMEAKGMMASGFGATGIELEFDVGMDFGDLVLPGLLSMKVSLGAQAQGKNFALLLIHRGMPHYLPNQLPGAAASPVWATPKPTCFMTLFGRSFSITLTSRASLYVLQDPITLPDDGAAGLALSLTELPLTLSAGATTELSYTYQAMKVYDWAPGWYCCEQEQALRTDFNNIIQTIGKKDLKVAIRSWLANFERIYDWPAAVSRVKKQKGAAPIQLQDIWDDYLTYQLRKHDRVSRSQQVKVVAKRTYAAVVGGSPVDPTLLGKMLGGYWDDAMAHLSASADLQTRLAAIINIIPSEDYVATYAQKFKLSPIPSTLDIIRQETGLIRNQAIEFYYRLGEASDTQMSGLPTNVVPPKWGALAGFNAPWWYLAFLKISSHAAEGSAGANVSPMLARLQGTVSGQIKRTAYRYQTYSLSEDYKRTLVYTQDTMLIYRQAVMAAGAATNLVSLQPGKSYSGSAGYSKFVTNGMNYRSVGVYWLYPDRVNQPNVLTQMGSGLSYGVSVNSADLLAMLSGIAQIKSAAQTGQELKFLPRYDRMLETLARYLRMSKKSLGEFLASIPMAKQAGWAMMESLLIEASYSFKPLNMTTSWQQKGSVQVCDLPGLWLQDPMSYCDNFDAIRIRCRMADHRQSQHSFRLRAGYVADFGIVLSGIEEAGSESVLDLHTEFYNGKNHETAVPPVAIFYQ
>NZ_LN890655.1|WP_095043657.1|2623560_2625114_+|tail-fiber-protein
MATSPDYPANGLEINFLGLPMVFNDGKTENTLNIVLTNNNFFVSLDPAQDTNIVFTPDTPVSIWFVVDSPQASAATVRDWALTSNDDLHKAGVALTISPDPDHWTIDRDDSLSGSPLNDSLRGWKLTPRQEVTLVPGQSLLVTLSGLITGLPDGPTSGYCKVLMPNVDAYGREISELRKVIGPIIKSHTIITGDRVGIGTGMPGSTLDVNGGVRAKGGEPGEDNSFLFGGDGHGVTGMNSLGDGSLDFYASGLKAVNIESTDFNLLTATILGDLKVMQGEHSYSGGNLTIDHKLTTTDLTVQVITVDTLYASKLLATQLTTSGAATIGGDIKSQGRIQDVSGDVMPVGTVVSFIGQDIPIGWLICEGQGIPYYTPEFIKMYGALYQVLGQPPFFKDGNNNDYFHAPDLRSRFIVGAGSGAIEDDSGNLLTTYARNNRGGTEFVTLTVDQMPTHTHSIDSHLYFHSRSFQGSNEGAAPLKRYRENEGDITLYGTDPTGGGKQYENRPPYYALTYIIKY
>NZ_LN890655.1|WP_095043656.1|2619552_2623530_+|hypothetical-protein
MPDRLICYARCQNPDADSAFPEVDRDRIKIAVGNSSTEALSALLAGVISTDKQSIIEDQLEALQFAPTLQHVTVDTGPIFEALRHEKQFHALAGGQRWRIKTRRESGKKAGQVADDAQLTLPDALANTLNSLNQLEEDKDRNAAAIDSLRRQIYADWCWYLKFATELKLINDSPNFGPDQPPPPDFGDDPGQAPPPPPKPQVGTKVEQTDKAPTGWDDGIEPDGPQSEDATAAAAPEADVEAAFLDGFKEFITAQIDSQLGALLSRDAQLKTAIDAQFAAAQADLLGYQAESQFLLAGDIVDWAAFTAAVAAQAATVSVFNNLAAPQNRAAYLRSINQQLADSDELLPWPAAAADSGPYQSLKSQLDTPDLPPLLAAALRLRANRLALEAYVPGVIKHRPALELAPQAADRFWRPNDPVALISGYDPTPRHQDTRDNVMARLLPLDWELQGGDPDGLVHFKSLLEELWGGEITTVPSPDWQPIFLAWDTAFSQAHQSQDQTYDPAYLQANFRLGDTDFAAVQQATYDKPIPFYGRAILTPGGSISLKNTIIGNLVPVLVGQFMAGAAATGGQPATIDAFNVWLKGIDPAVENPALNNPDLPVEQQISQWLTDELDRLDDTDSRLMDHLLDYLKADSRQPIIRQFLKEHSGADLADNLDAFLDWATAHSHIQAGYAAQHRPAANEPLAIALVDQADVRQDFVAQLTVMLGDNLQRYYDEKSIPAEQQAGYPDDHYDELIAWYQPQVNEALQLVVQIRAYRALLDIRGLAQALTGFGEALVMRHQAFQLPVYDPFPHDKDDAFAARVRAAVQTANRVAPSEDLPFSPWRAGKIALTRLELLDNFGRYWPNERATESWDFLVQASDSLPDAGDTPGKEFATPPRLAQAARLAFRWLAANTEIEEMNDHPASNPICGWVVPNYLDNSLMIYAVEGQALGYIDEGGQWRTFPGNRGPILPADIANPHLARLVQWLSAQGQAFLADFLTTLDGAQENMEPESFAQHEALALLMGRPLALVRADVRLQLQEPPAINVSKLKVQADVEAYHQNLTNGATGSFPARDTFAFEQVQIPLRLGEFHRLNDGLAGYWLEDDDGGYAGDTFYALQTSPIAGLSAQIQTRHQVDSDDRDESQFLLYLSLGDPRPRKISLLLDPRAPIHATTGILPVKALDIPRDQYQAALQRLQVAFLTAPVLAPEVGLEMSLPTEPGFDWTWLQLEGHHWSSISAQGIIRRHQLAHHLGAGAGALWAGLLQQGWLEALDGDTARIVAEDKRRQADLPPALAPLQEAVELLFHRLRIRPFDPTARLDSGQQIREGWLRLSPADDHDVVQ
>NZ_LN890655.1|WP_095043655.1|2618280_2619531_+|hypothetical-protein
MTNSLLVIPVQLDVLRLAEGLPVAGPILDFTKLPWGGSHNYKDSPYLSETLAAEAFEDQHELQPGLHFHWSLPLALTKTSSIGIVYRQSFQSVFGKGAQANGEKSGDDIWNDLVALNWLQVIDDRIGLARAHLPAAAELAAQLQATLPAQAQAVRQLLKTSVFPPAPNRWLLSRIIDGQPQTIQLIESDYVWPTGQEKDDAGPLADRYTIYPQITPDPAQQPYRYLGRAYELGAGPPSADPADYLDSPLTAAGYGEPTFAAFYPICRSVFGHYDPRPPRADQEQYELIGWYDSPEQDYLKLFVAAFKEKWQADHQTDATEGTHQQHQQTNYLYLDLLDVIYRQLRIVIPISPPQDALQAISPDGSPAAGGGPKNGWEYLQQHLWLDEQGRLLPKAYRMTTVVAEPFQARADDIRQL
>NZ_LN890655.1|WP_173776337.1|2616787_2617732_+|NAD(P)H-binding-protein
MSSQPPIHAVTGAFGYSGKYIAQRLLARGCAVRTLTNSPQRGNAFGEAITAYPFNFDRPDKLVEALRGVSVLYNTYWVRFNHRQFSHAQAVTNTLILFDVARRAGVERIVHVSITNPSAAPHLEYFAGKAELEQALIASGTSYAILRPAVLFGKEDVLINNIAWTLRRLPVFGVFGDGSYRIQPIYVDDLAELAVAQGAGRENVIVNAIGPETFTFRELVTTIGGIIGHERPVLSFPPRLAYWATRVVGLFVGDVFLTWEEVQGLMAGTLAVDAPPAGTTALTAWARQHADTLGRHYSSELARREDRRTAYRSN
>NZ_LN890655.1|WP_095043654.1|2615258_2616791_+|DUF1269-domain-containing-protein
MSNMPHHVIVASFSAETGADEALKELKLLQGEKLLEIVDAAVLRRDTRDRIHVQEVHDVGGGKGAVAGGIFGAAVAVLAGPVGLVLGAAGGALLGGLAAKHVDMGLPNDQLKNLAETLEPGTSMLVAIIEHEWLGNMKDALHNSGARVLMAEALREDLTAKFGAGSTGYAAYVDGREVVAEPEGDEENRLELTHVSAEEGGVVVRTHVLTKDGLVNRQITVSEKGITTTDTPVAQKSRPEGAAVTLAQLEAEAAQLAQAVSDYPESRYKLRAHFYSLYGQGKRTSGYGNSELNFMRWEINRGVLNRLDDPTGAGSPWWREVNGWFLTTSELAVMVEYAGLGDEKLPRAVRYWIDYMRTPSPANWYRAHNRGIAEGYVRYEALAAEENEYEQFFMNEVLFRVIFASSMVMGKSFGALGRVMSNPILPAVDLLVSIPHFYPHRYPMTFMDKMHILHNGYSLREKAAQLLDERFVLPQLEELYQWTAEWLELPELAGYIIDGQPSYPKRETVA
>NZ_LN890655.1|WP_095043653.1|2613120_2615262_+|phage-holin-family-protein
MEQPKTPLAKRPLFRTLLIWLIQTVALLIMAWLMDSVLVETLTTALAVTAVIGLLNALLWPILSYLLVPFAVLTLGFGALLLNGLFVWLAARFVPDFGLTSYWAGFWLALGMAAINIILSTVLTIDDDNSWYRNQVNRRMKFMVRPEKSDVPGILFLEIDGLARPILQQALDGGFMPTLKRWLDSGDYTLTGWETDTSSQTSASQAGILHGNNTGITAFRWYDKSVGQMVASNNTKLLPKIERALSNGNGLLADSGASRGNMFSGDAPYVMNTASALLDRGRFHSSEFQAYFANPYNASRTILLFLWDAILEMWQFGKARRNGVTPILDKHHRGGIYPLMRATMTVLMRELNVYTLLGDMFAGRPAAYATFVGYDEIAHHSGVLDPGAFDILRKLDEQFARLAGARRSAPRPYHLVILSDHGQTGGATFLQRYGLTLQEHVQKLMTEEYTVITSHGPDESHGVINAFLTDIIANEASAVSSLVGRVFKSKTVNGEVRLTAEGPRDGAPKRGRKGKGKDETPAVIAVASGNLGIVSFTQWPERATAEQIEAAFPAVLPGLVQHPGVGFVMVRSAKHGPVVMGANGIYYLATDLIEGENPLTNFGLHAADHLRRTDSFSTCPDILVNSFYDPTTGEGCAFEELIGFHGGMGGPQTQPFLLHPVALTVNEELIGAAAVYRACKGWLNALQGADSSAPAEPRETRFPAVTGQRSIDR
>NZ_LN890655.1|WP_095043652.1|2611330_2613067_+|AarF/ABC1/UbiB-kinase-family-protein
MAETSSIDSVRESLRLQQVYNVFVRYGLDILFSHFGMVDGWRRRMQDWVWDLPDNLEIPSLPTKVRLMIEELGPTYVKVGQILSSQASVIPPDWETELARLQSDVPPFPSEQVRETIISELKAPPEQLFATFEPASFAAASTAQVHRATLHDGTEVVVKVQRPDIQKQMKADVGIMINAANVIARRSQALRAIDLPGMVDQFGSNAIRELNYSGEAYNAFRLSQNMAGCPGVHIPHVYTDYSTSRLLTMEFVRGVKISNLAAIDAAGIDRQALAMNTLRALIKQLMFDGFFHADPHPGNLLVNLQTGDVTFIDTGMVGELELAQRLSLIQLLIALQNQDVDATATMLKSLSVPFMGAVDDKAYRKDFQRTLGPYMIGGARLDFSQSLSLSMDVLRRHGLRLDPNLTLAVKALMQVIAMGSLLFPDEDVGQLSVAIIREEALNLVTADNIQNAAGKVAGTALRQVADNLPSLSTATASWLKQYRKGRFEVHVDTSDVAREVDKIAHIGRQAVIAVILVGLIIGSAITTVGVGLGGFDGPGWEFVARIAGLGYILSSIVAGVIVLRLAWRWLRGGDPGAD
>NZ_LN890655.1|WP_095043661.1|2644982_2645594_-|CRISPR-associated-protein-Cas4
MNPTAEAEQEPFTFRVIDLKQYVYCPRVAYYHLILPRVRPITYAMEHGQQSHTQAEGRERRRSLAAYGLKEGERTFNVALWSPELGLSGELDMLIETATEYIPVDYKDSDKIGDHFKLQLLAYGRLLEEAGGRPAKMVRRGFLYLIPLRKATEVAFTPRLRGELAAALGDIQLMAGRQRMPQPTDRQRRCIDCEFRRFCNDVG
>NZ_LN890655.1|WP_095043662.1|2645593_2645869_-|CRISPR-associated-endonuclease-Cas2
MNCLLIYDIADDRIRAKVADACLDYGLDRTQFSAFHGDISRNHQAELFKKVTRLLGKRPGNIQLIAICETDWNGRLMAGRPYDDIHDQEAT
>NZ_LN890655.1|WP_095043663.1|2646120_2647164_-|CRISPR-associated-endonuclease-Cas1
MPIIHQLIADQFGSHLGKYQGRLKLTKQKEVLAQAPLLHLESVLITNSGVSISAEAIRACVEAGIPIHFLSGSGTPYAALYSAGLTGTVLTRRAQLDAYRDLRGVRLALGFAGGKIENQSRLLKYVAKYRKETDPALHQELRWLAGEVVDHMEELCAIDFLAPREGYCLDDVRDGLLSTEGRAAQKYWRAFKLLLPESLGWPGRQGRGARDPFNSALNYGYGVLYSQVERALVLAGLDPYGGFIHVDRPGKPSLVLDLIEEFRAPVVDRTILGLVNKGVALQQDERGYLAEPTRRLLAERILERLETAERYETKRHPLRAIIQMQARHIATFVRGEREAYEPFLAAW
>NZ_LN890655.1|WP_157913106.1|2647522_2647759_+|hypothetical-protein
MARKADQAELKQLDEAITAHPGRRSGTWAGLFKWSREKVNRHLTTLNEQGRLYYEDDEGRLYPANWSESTQKSRYSDG
>NZ_LN890655.1|WP_095043665.1|2647806_2648862_+|WYL-domain-containing-transcriptional-regulator
MTGKFESKLERYEQLKSLLLAHPDGLTKAEIARRLGIHRSTAADYLDEFATPYGSLPIYEPMPGRYAVDRDLYEVKLSLNQHESLALHLAARLLTTRTDKHYPHAAAALRKLGEAIGELSPPVSRHMAQSAEAIDGPHRRQDPRFLEILETLTRAWSLGRKVQLAHETDDGRVFDYVFSPYFIEPYGVGRTVHVIGLRQPPNRIRTFKVERIRTIRLLDEPYVIPDDFDPQEKLRNAWGIWYTDKEPEEVVLKFSARVARRVTETTWQFGEEIERNATDGSVIWRGKVDEWQEMLPWVRSWGSDCQVLEPLELREMLMGEARAMAERYGWFVSTHKLNRKQSVAEDFFGLT
>NZ_LN890655.1|WP_095043666.1|2648861_2651315_+|CRISPR-associated-helicase-Cas3'
MGLYNYQNRVRDTMLSGQSIILQAPTGAGKTRAALTPFLDTFWDAPSGTFPRKCIYIVPMRVLANQFTEELREESARYQRVFRRNLDVGRQTGEHREDPEFQKELTFATIDQVLSSWLIRPYSLSVRQGNLNAGAFVGSYLIFDEFHLFDPDSTLPTTLHMLKMLKGISPFLLMTATFSGDMLHDLAHELGAKDILLSEDELQDIPSQKKERHFHTVDRPLVSDEDIYIDQIVSAHLAQEFDDQRSLVVCNQVERAQRLFQALAQHKDLAGVTVRLLHSRFLREDRQRREAEVRQEFHKEKEKHTVRSMILVGTQVVEVGLDMSCRALHSELAPAAAILQRAGRCARYEGEIGNVYVYQVDQNQLHPYHEKEAKQQCVLTWEWLKTHESQQLDFRLEQQLINHAHTPTDKKLLEGLRGTELGHRERVYALWRGDGTRADAANLIRNIQAVTVVVNSEPDQLRHAPFHAESFSLHPGTLQGKFKTWKDKNESLDPDWDRGRLPWLVQKLVETGDEADTQSNRPIQYEFKSVAHAHELSAPLVVINPALVGYSPELGLTLYPTEHYECKVPQLMQSQREKYGYRLESYERHIQLVHQVYSSDWQEWIAAVGKRIETAYDWQPGIVSAMAELVVCLHDVGKLSEGWQQWACDWQAAIGIPLPHGIAVAHTDYDPTNELHKALERKMGRKRPNHAVESAYAVIPILLSMLPDKDKHRPLFRAAFTAISRHHAAFTSRPDSYRLIGGYEQHITETMALLPESLQSIDIAGMWQQLVYDDKAQRGIDTSLLVQSDNEPDMVCYMALVRALRFADQQGTKLGNH
>NZ_LN890655.1|WP_157913107.1|2651748_2653536_+|hypothetical-protein
MTGLAHVFYIDKSTGTFADELTAAGLITVLKWLYHWQGIERPAIIQIDKGYCYSIHCDPPLDLDRVSLETQPFYPAPIIQTTKNQVSLPDMPLLAVVSYEGEKEKRNQYLEAYKNLDKTAKRADIVGEAHPALESLPPAPHPHWDVFRMINPAALIGYNGLMAQWLEVGDAGQVGAVSNLLCRLFSQSPNEVAAARTAWREMAKAHNWKTIDVTASQFYNPSQGKGVNRPQPDGVGSGNLDNFWLLEWLKAVGLYEIGYTRTLQGVGDRKTYVPVYGRMTPAFASAVYADFRNRMRFGESAVRSDILVVIRYLQAFLSRSQFSQSESEEERRQREILGDEYTPADFMHGFQVAFYKDLGNAVATMNLSFLNLPGWVTIQEDDDVTAYQAILQEHEEIVRQFEENKGSELDLLTRYRDFIAADNLDPFLEFTTAYSSWLISEGEKPGFPPRKFTINNLRRLLVSMKLNLSEILDSPGFGNIAYAIRQSTVTAQYRKSQGDRRYDVRYGLGRDLVRQSQYPDEFVAALSDFLHKFNAENAQVMETRPGPYRRSVQTSDIEDILRLIDEHGSDLIAKLLVAYGYAREARTPENNQESN
>NZ_LN890655.1|WP_095044888.1|2653549_2654527_+|DevR-family-CRISPR-associated-autoregulator
MVSVYSVSLSAQLTLDMHSLNNEGGEGNQIQTRMVNIVDGNGRLQNVNAISGDMIKHILAEHLHRIAGASGLPLCAGCRTFNANRISADEAYMAYIADKSDGESLTRMLQSCAMDDMLGNLITAGSKSLPRKSVVEFGWVVGKPEQTSSDSYFHVKYASERGDAKRKADSDEETRKANLGQAIFHRPANSGVYALIASIEAARIGFNDITQQYVLSEEERQARFKSLLEALLYTLVEPAGAMRGTQAPHIVDVSGVLTVSRDIIPAPTFSPLKEGYAEQLTMLCGTLNGIRPNALTSHHFQSLAEYAEKVSGLMAEMPYSMRYEG
>NZ_LN890655.1|WP_095043668.1|2654533_2655256_+|hypothetical-protein
MAWLEAIYQPTTLFSLRPSWTTSSGGKTLLLPSPYALKMAVFDVAIRTSSLSQAEKSWPWIRDLGIGIKLSRQIVVTNTFIRILRIKEIKTKANEKEAAIAKSKEDGNWPFTRTIGYREFVYYPDPISLVFSVPDEQVVQLSDWLGQISHLGKRGGFVQLLAPPRIVVDEGEFVLLTTEVDRFPIAGMVQQLDDCDPQMKFEEANIYEGKKPKRVIRHIVLPYRIVRSSRAYSLYESTTA
>NZ_LN890655.1|WP_095043669.1|2655286_2656318_+|CRISPR-system-precrRNA-processing-endoribonuclease-RAMP-protein-Cas6
MTPLSFTHLHLSSIATTDLILEGHHAGNNLRNALANVMRYATCPETHRRGAPSAEHAATCPACWLLAAEADPGSVSRAYAVEPPRRPIDRVRAGQRFSFGLTLFGDGFRFLPYVVLAAAEMGRVGIGPGRREGLGRFSLEAIHAHNPLTGETHLLLAPGDPVVRVLPAAVTLDHATAQAATLAHCLERDGQLLRIDFLSPTRLEEKDNLYKIPDFAVFFGRLLWRIDDLALNFCGGARRDPDEVAGLRRAAERVRLIESNTRWVEMWSWSGRKQDRTPIGGFVGRAVYRADDWTPLLPWLILGQGTHVGKTPVKGNGVYEIATLESGYWSLNIGLGHPVSAGR

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Crispr_ID: NZ_LN890655_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LN890655_7

3485761-3487940

TypeIII-A

Consensus_repeat	Method
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CRISPRCasFinder
CGCGGCCGNNGCCTGTTTGCCTTTGAGGGATTGAAAC	CRT
GCCTGTTTGCCTTTGAGGGATTGAAAC	PILER-CR

29 spacers

cas3

The CRISPR arrays of NZ_LN890655_7

>merge|NZ_LN890655|7|3485761-3487940|CRISPRCasFinder,CRT,PILER-CR
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACACATGGTATGCCTCCCACTACTAAGATCTTGAAGAGTCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCTAACAACAGCCCACACTCTGTCTGCCACGACATCGATCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACTGAATGAATTGGTACGCCAGAAAGAATTCATTGGCCGCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAACGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACGTACACACGGGGCATAGCTTGGGCGCATTTTTGACGGTCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACGTAACGGTAAGCGACGTAGATGATCCCGGCGATGCCGACGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACTGCTAGCAGCAGCACTAAAACTCCAATCCAAATGTATTCCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCGGCGGCCCGAATCGTACGTATACGCTCTTTCAAACGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCTCGACCACTGTTGCGGTTGGGGTCGCCGTTGGGCAATCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAACGCGGCCGCAGCCTGTTTGCCTTTGAGGTATTGAAACGTATGGATGGCCGTGTCGGTGTAGGCATAGGCGATGCCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACTTTCCACCCGCTTCGTCTAGATTGGGTTTCAAGACCCCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACTATACGTCGGGGATCGGAGTCTACTCTGTGGTCATCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACATCATAAACCAGTTGTTGGTGTCGGTCAGGTACTTCCACGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACCATTGCTCCAACGGCTCCAAGACCCAGTTTGGGTCCTCGGCCGTGGCCTGTTTGCCTTCGAGGGATTGAAACTTCTGGTTGGTTCACACAATTCAGAGGTTCAGCCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACAATTATAGGTGACATATTTCCTCCGTTGATTTGTTTGCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACGAGGTTGGGGTTAGAAAGCAGTACCTGCCTTCCCTGTCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACATGGGGCTGGCACCCCTAAAAGAGGTTGAGGATGTCGCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACACGAGGTCAATAAATGGAACGAAAGTGAGGAAAGGGCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACCAGTTATTGCCACCCTGGTAATCGGGCGTCTGATGGGCCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACAATTCCTAGCCGAAGCTGATTTCTTGCAATGCGGGCAGCGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAACAATGAAATAAATAAATGAATGAGTCAAATATCCTGGCACGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACTCTGTGTTTCTCACGACAGTTCTTCCTCTTGCGTTTCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACTGATACTTCACTTGATACAGTACTCTTGGAACTCAACGCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACAAGACGCTCGAACCATAAGGAGGTCCCCTCATATGTCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACACTTCGTCGTCATTTGCAACCCAACTTTGTCCGTCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACCTTACATTGGACCTTTGTAGCTTCATCTATTGCACTCCCGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAACGCTTGGTAAGGCATATAACGATCAGTCAAATCTCTCCACGGCCGCGGCCTGCTTACCTTTGAGGGATGAATAC

>NZ_LN890655|7|7|3485761-3487940|CRISPRCasFinder
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	ACATGGTATGCCTCCCACTACTAAGATCTTGAAGAGT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CTAACAACAGCCCACACTCTGTCTGCCACGACATCGAT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TGAATGAATTGGTACGCCAGAAAGAATTCATTGGCCG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	GTACACACGGGGCATAGCTTGGGCGCATTTTTGACGGT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	GTAACGGTAAGCGACGTAGATGATCCCGGCGATGCCGA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TGCTAGCAGCAGCACTAAAACTCCAATCCAAATGTATTC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CGGCGGCCCGAATCGTACGTATACGCTCTTTCAAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CTCGACCACTGTTGCGGTTGGGGTCGCCGTTGGGCAAT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGTATTGAAAC	GTATGGATGGCCGTGTCGGTGTAGGCATAGGCGATGC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TTTCCACCCGCTTCGTCTAGATTGGGTTTCAAGACCC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TATACGTCGGGGATCGGAGTCTACTCTGTGGTCAT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ATCATAAACCAGTTGTTGGTGTCGGTCAGGTACTTCCA
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	CATTGCTCCAACGGCTCCAAGACCCAGTTTGGGTC
CTCGGCCGTGGCCTGTTTGCCTTCGAGGGATTGAAAC	TTCTGGTTGGTTCACACAATTCAGAGGTTCAGC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	AATTATAGGTGACATATTTCCTCCGTTGATTTGTTTG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	GAGGTTGGGGTTAGAAAGCAGTACCTGCCTTCCCTGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ATGGGGCTGGCACCCCTAAAAGAGGTTGAGGATGTCG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ACGAGGTCAATAAATGGAACGAAAGTGAGGAAAGGG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAGTTATTGCCACCCTGGTAATCGGGCGTCTGATGGGC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	AATTCCTAGCCGAAGCTGATTTCTTGCAATGCGGGCAG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	AATGAAATAAATAAATGAATGAGTCAAATATCCTGGCA
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TCTGTGTTTCTCACGACAGTTCTTCCTCTTGCGTTT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TGATACTTCACTTGATACAGTACTCTTGGAACTCAACG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	AAGACGCTCGAACCATAAGGAGGTCCCCTCATATGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ACTTCGTCGTCATTTGCAACCCAACTTTGTCCGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	CTTACATTGGACCTTTGTAGCTTCATCTATTGCACTCC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	GCTTGGTAAGGCATATAACGATCAGTCAAATCTCTC
CACGGCCGCGGCCTGCTTACCTTTGAGGGATGAATAC

>NZ_LN890655|7|2|3485761-3487940|CRT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	ACATGGTATGCCTCCCACTACTAAGATCTTGAAGAGT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CTAACAACAGCCCACACTCTGTCTGCCACGACATCGAT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TGAATGAATTGGTACGCCAGAAAGAATTCATTGGCCG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	GTACACACGGGGCATAGCTTGGGCGCATTTTTGACGGT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	GTAACGGTAAGCGACGTAGATGATCCCGGCGATGCCGA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TGCTAGCAGCAGCACTAAAACTCCAATCCAAATGTATTC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CGGCGGCCCGAATCGTACGTATACGCTCTTTCAAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CTCGACCACTGTTGCGGTTGGGGTCGCCGTTGGGCAAT
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAA
CGCGGCCGCAGCCTGTTTGCCTTTGAGGTATTGAAAC	GTATGGATGGCCGTGTCGGTGTAGGCATAGGCGATGC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	TTTCCACCCGCTTCGTCTAGATTGGGTTTCAAGACCC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TATACGTCGGGGATCGGAGTCTACTCTGTGGTCAT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ATCATAAACCAGTTGTTGGTGTCGGTCAGGTACTTCCA
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	CATTGCTCCAACGGCTCCAAGACCCAGTTTGGGTC
CTCGGCCGTGGCCTGTTTGCCTTCGAGGGATTGAAAC	TTCTGGTTGGTTCACACAATTCAGAGGTTCAGC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	AATTATAGGTGACATATTTCCTCCGTTGATTTGTTTG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	GAGGTTGGGGTTAGAAAGCAGTACCTGCCTTCCCTGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ATGGGGCTGGCACCCCTAAAAGAGGTTGAGGATGTCG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ACGAGGTCAATAAATGGAACGAAAGTGAGGAAAGGG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	CAGTTATTGCCACCCTGGTAATCGGGCGTCTGATGGGC
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	AATTCCTAGCCGAAGCTGATTTCTTGCAATGCGGGCAG
CGCGGCCGCAGCCTGTTTGCCTTTGAGGGATTGAAAC	AATGAAATAAATAAATGAATGAGTCAAATATCCTGGCA
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TCTGTGTTTCTCACGACAGTTCTTCCTCTTGCGTTT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	TGATACTTCACTTGATACAGTACTCTTGGAACTCAACG
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	AAGACGCTCGAACCATAAGGAGGTCCCCTCATATGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	ACTTCGTCGTCATTTGCAACCCAACTTTGTCCGT
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	CTTACATTGGACCTTTGTAGCTTCATCTATTGCACTCC
CGCGGCCGTGGCCTGTTTGCCTTTGAGGGATTGAAAC	GCTTGGTAAGGCATATAACGATCAGTCAAATCTCTC
CACGGCCGCGGCCTGCTTACCTTTGAGGGATGAATAC

>NZ_LN890655|7|3|3485771-3487867|PILER-CR
GCCTGTTTGCCTTTGAGGGATTGAAAC	ACATGGTATGCCTCCCACTACTAAGATCTTGAAGAGTCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CTAACAACAGCCCACACTCTGTCTGCCACGACATCGATCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	TGAATGAATTGGTACGCCAGAAAGAATTCATTGGCCGCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAACGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	GTACACACGGGGCATAGCTTGGGCGCATTTTTGACGGTCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	GTAACGGTAAGCGACGTAGATGATCCCGGCGATGCCGACGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	TGCTAGCAGCAGCACTAAAACTCCAATCCAAATGTATTCCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CGGCGGCCCGAATCGTACGTATACGCTCTTTCAAACGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CTCGACCACTGTTGCGGTTGGGGTCGCCGTTGGGCAATCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CAAACCACTCCCGTGCCATGGTGCGCAGGAAAGCCCAACGCGGCCGCA
GCCTGTTTGCCTTTGAGGTATTGAAAC	GTATGGATGGCCGTGTCGGTGTAGGCATAGGCGATGCCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	TTTCCACCCGCTTCGTCTAGATTGGGTTTCAAGACCCCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	TATACGTCGGGGATCGGAGTCTACTCTGTGGTCATCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	ATCATAAACCAGTTGTTGGTGTCGGTCAGGTACTTCCACGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	CATTGCTCCAACGGCTCCAAGACCCAGTTTGGGTCCTCGGCCGTG
GCCTGTTTGCCTTCGAGGGATTGAAAC	TTCTGGTTGGTTCACACAATTCAGAGGTTCAGCCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	AATTATAGGTGACATATTTCCTCCGTTGATTTGTTTGCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	GAGGTTGGGGTTAGAAAGCAGTACCTGCCTTCCCTGTCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	ATGGGGCTGGCACCCCTAAAAGAGGTTGAGGATGTCGCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	ACGAGGTCAATAAATGGAACGAAAGTGAGGAAAGGGCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	CAGTTATTGCCACCCTGGTAATCGGGCGTCTGATGGGCCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	AATTCCTAGCCGAAGCTGATTTCTTGCAATGCGGGCAGCGCGGCCGCA
GCCTGTTTGCCTTTGAGGGATTGAAAC	AATGAAATAAATAAATGAATGAGTCAAATATCCTGGCACGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	TCTGTGTTTCTCACGACAGTTCTTCCTCTTGCGTTTCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	TGATACTTCACTTGATACAGTACTCTTGGAACTCAACGCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	AAGACGCTCGAACCATAAGGAGGTCCCCTCATATGTCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	ACTTCGTCGTCATTTGCAACCCAACTTTGTCCGTCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC	CTTACATTGGACCTTTGTAGCTTCATCTATTGCACTCCCGCGGCCGTG
GCCTGTTTGCCTTTGAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LN890655.1\|WP_095044338.1\|3482870_3483098_+\|DUF2905-domain-containing-protein	unknown	unknown	gnl\|CDD\|378570
NZ_LN890655.1\|WP_095044344.1\|3489550_3491452_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_LN890655.1\|WP_157913209.1\|3478336_3478771_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095044920.1\|3476820_3478071_-\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|179486
NZ_LN890655.1\|WP_157913212.1\|3488739_3489399_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_162292497.1\|3491771_3496502_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|206637
NZ_LN890655.1\|WP_095044349.1\|3503666_3504644_+\|phage-integrase-N-terminal-SAM-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|234698
NZ_LN890655.1\|WP_095044341.1\|3485014_3485467_-\|tRNA-adenosine(34)-deaminase-TadA	unknown	unknown	gnl\|CDD\|182786
NZ_LN890655.1\|WP_095044350.1\|3504787_3505177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095044347.1\|3498715_3500416_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_LN890655.1\|WP_095044336.1\|3481014_3481635_-\|uracil-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234653
NZ_LN890655.1\|WP_157913211.1\|3479943_3480996_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_LN890655.1\|WP_095044346.1\|3496661_3498566_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_157913213.1\|3500508_3503601_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LN890655.1\|WP_095044342.1\|3488059_3488698_+\|deoxynucleoside-kinase	unknown	unknown	gnl\|CDD\|224345
NZ_LN890655.1\|WP_095044921.1\|3505192_3508240_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118
NZ_LN890655.1\|WP_095044339.1\|3483141_3483975_+\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|224833
NZ_LN890655.1\|WP_095044337.1\|3481799_3482864_+\|Holliday-junction-branch-migration-DNA-helicase-RuvB	unknown	unknown	gnl\|CDD\|234619
NZ_LN890655.1\|WP_157913210.1\|3478791_3479826_+\|esterase-family-protein	unknown	unknown	gnl\|CDD\|225256
NZ_LN890655.1\|WP_095044340.1\|3484045_3485014_+\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|187566

Protein	Function_ID	Function_description	E-value
NZ_LN890655.1\|WP_095044338.1\|3482870_3483098_+\|DUF2905-domain-containing-protein	gnl\|CDD\|378570	pfam11146, DUF2905, Protein of unknown function (DUF2905). This is a family of bacterial proteins conserved of unknown function.	3.14132e-12
NZ_LN890655.1\|WP_095044344.1\|3489550_3491452_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.14495e-55
NZ_LN890655.1\|WP_095044921.1\|3505192_3508240_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0
NZ_LN890655.1\|WP_095044920.1\|3476820_3478071_-\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|179486	PRK02862, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_LN890655.1\|WP_095044347.1\|3498715_3500416_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	4.66977e-45
NZ_LN890655.1\|WP_162292497.1\|3491771_3496502_+\|hypothetical-protein	gnl\|CDD\|206637	cd11304, Cadherin_repeat, Cadherin tandem repeat domain. Cadherins are glycoproteins involved in Ca2+-mediated cell-cell adhesion. The cadherin repeat domains occur as tandem repeats in the extracellular regions, which are thought to mediate cell-cell contact when bound to calcium. They play numerous roles in cell fate, signalling, proliferation, differentiation, and migration; members include E-, N-, P-, T-, VE-, CNR-, proto-, and FAT-family cadherin, desmocollin, and desmoglein, a large variety of domain architectures with varying repeat copy numbers. Cadherin-repeat containing proteins exist as monomers, homodimers, or heterodimers.	2.13108e-14
NZ_LN890655.1\|WP_095044349.1\|3503666_3504644_+\|phage-integrase-N-terminal-SAM-like-domain-containing-protein	gnl\|CDD\|234698	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed.	3.1227e-20
NZ_LN890655.1\|WP_095044341.1\|3485014_3485467_-\|tRNA-adenosine(34)-deaminase-TadA	gnl\|CDD\|182786	PRK10860, PRK10860, tRNA-specific adenosine deaminase; Provisional.	5.51636e-64
NZ_LN890655.1\|WP_095044336.1\|3481014_3481635_-\|uracil-phosphoribosyltransferase	gnl\|CDD\|234653	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed.	5.63619e-115
NZ_LN890655.1\|WP_157913211.1\|3479943_3480996_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	7.47003e-66
NZ_LN890655.1\|WP_095044342.1\|3488059_3488698_+\|deoxynucleoside-kinase	gnl\|CDD\|224345	COG1428, COG1428, Deoxynucleoside kinases [Nucleotide transport and metabolism].	1.92008e-63
NZ_LN890655.1\|WP_095044339.1\|3483141_3483975_+\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|224833	COG1922, WecG, Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane].	2.79664e-90
NZ_LN890655.1\|WP_095044337.1\|3481799_3482864_+\|Holliday-junction-branch-migration-DNA-helicase-RuvB	gnl\|CDD\|234619	PRK00080, ruvB, Holliday junction branch migration DNA helicase RuvB.	0
NZ_LN890655.1\|WP_157913210.1\|3478791_3479826_+\|esterase-family-protein	gnl\|CDD\|225256	COG2382, Fes, Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism].	6.92249e-24
NZ_LN890655.1\|WP_095044340.1\|3484045_3485014_+\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|187566	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs. This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	3.7601e-62

>NZ_LN890655.1|WP_095044341.1|3485014_3485467_-|tRNA-adenosine(34)-deaminase-TadA
MDDTEIWMRLALAQAEEAMKLGEVPVGAVAVLNGAVIGTGYNRKESDQDPTAHAEMIALRAAAARLNNWRLIDVTLYCTLEPCPMCAGAMIQGRLARLVYGAKDTRFGADGTIIDVLGQPAFNHRVEVVAGVLADEAGELLQRFFRLLRT
>NZ_LN890655.1|WP_095044340.1|3484045_3485014_+|NAD-dependent-epimerase/dehydratase-family-protein
MRILITGSSGQIGTNLGLYLLERGHEVFGVDVRPNTWTDAIPTLLQDLAGSFADFRGGLGHVPYPPNLDVVVHLAAHAKVHELVEQPARALENVVMTFNVLEFCRHNGLPVIFSSSREVYGDIRRYITEESYADFAYTESPYSAGKIAGEALIYSYAQCYGLRYLVFRFSNVYGRYDVDIERMERVIPLFMRKIGRGEPITVYGEQKVLDFTYVDDCVAGVARGIELLAGGRAANQTINLAYGQGNSLVTLAEYIAAELGVSPQITVAPSRVGEVTHYVANIGKARALLDYTPQVPLREGIRRAVAWATEYWAGQPAPQPEP
>NZ_LN890655.1|WP_095044339.1|3483141_3483975_+|WecB/TagA/CpsF-family-glycosyltransferase
MPSPTAIPILGIPVHAVTMVEALAVVEGYMAEPRLHQIATVNPEFVMAAQSDAAFRHALRTADLCLPDGVGLLYAARRHGQTLPERVPGSEFVYALAERAAACGWPLFLLGAAPGVAEEAARILEQRYPGLPIAGTYAGSPDPAENDAIVRLINDSGASLLYVAYGAPKQDKWIERNRHTLTTVRVAMGVGGSLDFVTGRAVRAPRWAQDRGLEWLYRLYKEPWRWRRMLALPKFAMRVLLSRELELRAARGSREQLLAILAKAPDVEPEEYDRLDD
>NZ_LN890655.1|WP_095044338.1|3482870_3483098_+|DUF2905-domain-containing-protein
MGEMGRLLVVIGLAVAFCGVIILIAIRFFPWLGNLPGDMRFEGQNYKVYFPLATMILVSILATILLNVLLRIFRR
>NZ_LN890655.1|WP_095044337.1|3481799_3482864_+|Holliday-junction-branch-migration-DNA-helicase-RuvB
MTTQNPPPDRPIAPQQKAEDVGLDTMLRPQRLAQFTGQERLKDNLRILIEAARGRSEPLDHVLFHGPPGLGKTTLAQVVANEMRANIRHTAGPAIEHSGDLAAILSNMRSGDILFIDEVHRLSRPVEEILYPAMEDFVLDLIVGKGPGAKNVRLKLPRFTVIGATTRLALMTAPLRARFGAVYRMDFYDQAAMEEIVGRGARILEVPIEAHGTSEIARRARGTPRVALRLLRRVRDYAQVRADGAITHETAVAALDLMEIDQLGLDDLDRRVLRAIIEKFGGGPVGLETIAASISEESDTIMDVVEPYLLQLGFLERTSRGRMASVHAYRHLGLAAPENGPRGGQRTLFDTPPG
>NZ_LN890655.1|WP_095044336.1|3481014_3481635_-|uracil-phosphoribosyltransferase
MVFESQHPLVKHKLTLMRDRETKPKKFRQLIREISLLLCYEATLDLITKPLAVESPMGLAEGRELVDKVGLVPILRAGLGMVEGVWEMMPGAEVWHIGLYRDEQTLKPVSYYNKLPTMPTVQVCLVLDPMLATGGSAVATVDLLKKWGAQRIKFVGILAAPEGIARLEAAHPDVPIHIAHIDSHLNEIGYIVPGLGDAGDRQFGTG
>NZ_LN890655.1|WP_157913211.1|3479943_3480996_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MVVALASFAAALVATPLARRLSFRLGLVAEPGGRRRHTGRIPKLGGLAIFAAWLVGVALIYWLLPPADANDALRLRGLVLGSLIVVVGGLLDDRYDLPPLAQFLIQLAGALVAILHIIFIELFTNPLPTTALWEALPFFRVDGNWVWIWRPMALLFTTFWILGMINAINFLDGLDGLAAGVCLIAAAFFAYHSYRLGLQTGQASMPLFPLALAGALLGFLPFNFSPARIFLGSTGAYLLGYQMATLSILAPAKLSTALLVMAVPIIDVAWQIVARIRRGQHPMRGDRGHLHFRLSDRGLPTRRIVLGYYGVAILFGLVAVLAASPILKVAILIGLSAAVFALLLRLNSEG
>NZ_LN890655.1|WP_157913210.1|3478791_3479826_+|esterase-family-protein
MRLLVVALLALLAGLLAAGCGAAARSPAVTALDPPTPVIVVPSPTLAVPSPTTAPTATATATTAPSPSPSASPLPESEEQPPGEASPPTPAVTPSVIPLPTPCAQPGRVEQGTLESAVAGEPMRYRVYLPPCYGVDDRFYPTLYMFGGNIHDDAIWDNLGLDEAAEAMITRGDIPPLLIVMPDNGWLANTTTSGPNSYEGFVLNELIPHIEATYRARAEADGRAVGGLSRGGYWSLMMAFRRPDLFQSVGAHSPALIDSHAGPAEDPRVTGTTNDLGDLRIWVDIGERDPYLIEALPLHEALTAAGVAHEWRVEPGTHEEAFWRARLEQYLMWYSGGWRVASGG
>NZ_LN890655.1|WP_157913209.1|3478336_3478771_+|hypothetical-protein
MSRVIHVDNPGKRRNQARRSIAEILRLLGRKAQIDDEARDMAAMLVYLLREIKATVDESAAAWEKRGYWMKVERFVRDYEWIPELAANIDDVIRHGAWDLLPELLADLMPRFDDIHIKTMTRKPSDWRGAYRKLLAEPPVSVLR
>NZ_LN890655.1|WP_095044920.1|3476820_3478071_-|glucose-1-phosphate-adenylyltransferase
MKSVLGLILGGGQGARLYPLTKERSKPAVPLAGKYRLIDIPMSNCFHADIEKIAILTQFNSASLHRHIWSTYTRDQFSPGWIQILAAEQTPHNRDWYQGTADAVRKQWVEIKEAGTRYVLILAGDHLYRMDYRKFVQRHIDSEAHISVAVQPVSRETVSGLGILKMGSDSRITNFTEKPKDPEILKQFESGANPDKPFLASMGIYVFNTDVLQEVLEEKLVDFGRDILPQSIDKRRVCGYTFDGFWEDIGTIRRFFEVNLRMAKANAPFDFYAAHAPIFTHARFLPGSEVQNSRLDEVLLADGCRIYDSTVRESVVGLRSIIGSEANIQSSILMGADYYETDAEKAENRRLARPDIGIGENAVIKGAIVDKNARIGRDVTIRYIPDRPEEETESWVARDGIVIVPKNAIVPDNTVI
>NZ_LN890655.1|WP_095044342.1|3488059_3488698_+|deoxynucleoside-kinase
MTKRFILVAGNIGVGKTSLTERLGGRLGWITGFESVVDNPYLAEFYGDMRQWSFHLQVFFLGHRAQQHLALAGQAQSAIADRSIYEDAHIFARVLHHMGNLNERDYQSYRSVYELIVANLPRPDLLLYLTAPVPVLLERIRRRARPIEAGISADYLSLLDSFYEEWLHSFDLCPVLTIRTQQLDFVHQAQSLDTVIDRIEATLSGRDEVIFD
>NZ_LN890655.1|WP_157913212.1|3488739_3489399_+|hypothetical-protein
MSSEAPAPGDATEKRPINRLVLLLAALLLSGVLVLAVWLIWRDGSSPAPATAVSAAPTAGRTPATDAAEPATDVPGDGFGLVSGPATPWSVAGGPGAATATASALAAVPTATSAPITLLGPPAGSAFMAGDVVTFYWQSPQVAAAGQQFVVMIAAGDEALALGRIAAANLGQGYQLQGAPGAAVGQPGNYSWFVVLADEEDGAIIAQSESRPLMILADN
>NZ_LN890655.1|WP_095044344.1|3489550_3491452_+|protein-kinase
MVARDKEDLSGQQIGNYEIESHIAARPASDLFLARDVKLERLVFLEVLRVTEEEDQNLVERFRRRMETVSQLKDPHVAVVSDFDVTDDGFPYAVIDYFPGETLAEKLADLRHDGQTLPVIEALELTKQIAQGLGVAHTAGLTHHDLRPENVMLSQDGAPILIDFGVPVVPHAQPPGVNGAEGELLDYTAPEVAEGKPLTRRSNIYSLGVILYELLAGHQPKLPNLPYDIFPQANMPKEEPLEEARPGLAGETYRLVRNCLWRQEWSRFETTDELITAIETAIFAEQELPKATTAWTPQRGRSMAFVIPIALVLVGILAFFLLRGIMGNRNAQADEPTAEGTPAGTFVAGADTAEPSPTESPTAELPTEAAQDFSINVVFPAPNREFTLQDTISFEWYWPTLPEPGMHFAVYLIDGEQEHLLGALDEPNNGGNYLLAVPGADIPATGEELGWQIRLESVAGGDVFVASDVIPIIIRDALPTPTAATTDTVAPTAGTPTVGASPTVCAVDPPPGWIYYTVRAGDSLSDLAENANILVETLLQVNCLPNVLLSVGQQIWVPPGSVPRTPTPPSLATPTNPPRPTSPPSATDRPTTIAPTTAPTDPPTTAPTDQPTEPPATDAPTNTPPSPVTEVPP
>NZ_LN890655.1|WP_162292497.1|3491771_3496502_+|hypothetical-protein
MKTKSTVLSLGSLLAALAFILLAVSPVLALPPVINNQTLTIPENSPDGTFTDPSFIKAYDKEDKPLTYDVIGGDGETLFEVGFTTGQVTVIDGSLLDYETKKSYVLVVKVEDVEALSDSAEITINLVDESDEPPSMDDQTFNVPENTANSGTVGQLAFDDVDVNDTHTFTILSGNGTGLGAFQIDSTGKIAVKDTTQLNREATPQFVLTVKIQDEAGFSDTAQITINVTDINENPVVNDTTFTISEAAANGTVVGTVTATDPEGGALTFTRSGTTAFSINATTGQVTVADNTQLDYETHPTMTFVVTVTDPGGKTDTATITVTLDEFNDPPEIEGDGIDDVIVNEGTASKVVNLWSAFQDDEDEDAELTFLVWDVDNDALFDADPAISNANGTLFLDFAPNAAGVANITVRAFDQGGEHVDDTFEVNVNDSPVPAGYDNVTVNEDAPNALIDLYDGFTDDEQPSSALLYEVIGNSNPGLFSSVNINLPNLVLDFAADANGQANITIRATDSGGLSAQTTFNVKVNAVNDPPTTSGIADVSVGEDAPDTVIDLADAFDDKEDDPEQLVFEVEDNSNPNLFESVTVNPGLATLTLNYKPNTSGSAILTIKATDKGVPGVPNSSQSVETSFDVTVGGVNDAPTLTSFSKNTEEDVAIQFTLNDFTSKYSDEDGDPLVNIRIDTLPANGTLKLGDANVTANQVIPAAGVAGLIFVPAPNWDQGATTFEWNASDGAAFAAAPATVTINVSAKNDAPIVTNFEKFGQEGINVLFTETDFTGAFSDVDGDSLVKIKIDSLPGHGSLKLVNSPVTVNQQINKDSLKDLRYVPDQFFFGEDSFGWSGSDGAVYSSPATVKITLSPKNDPPALDLNGDGVGTGFTAKFVAGGNPVVIAGQGLDITDIDSTMMQSATIIIVNRQNGNKELLDANVAGTNITKEFSPGSGVLFLTGPDTIANFEKVLRTVDYEIAPDVANPNTDTVRNVSFRVYDGELNSNDAVSKVTVINPRIEITVTPPFQTVAKGETALFTIVVKNTGNVDLENIIVSSAAVPDCNRQFDELAAGQSLDAYACIISQVQERTDNEVVVTAQDKEVGSQVTDEDESIVRVLQDIIVDISTAPSVGDTLIKGQNAVFNVTVINPSEANLKAVEVKAFVDYDLAVEAAAPNAPIPATECDKVIGNLDAGDESTYSCTINNVQSSFQIEVRATGLIDGVIETDDFDIDEIGVLDLTLEAFSLPFTILAGQPTLVEFSLTLNNISNVPLTLSSLESNLHGNLLNAGNGAISANTCPGLNLAIPAGEVRSCSYEVTLILQPPALTNVITAVVANGGNKQMTVVDEALVSVADFSPLEVTLSADPPSLVAPGGIVNLTAQVTNNTTGDLTLDGLTDSIEGNLSGKGTCQTPRMIPGNGSYTCTYSVTVSGQQAGNIVTHVVTAIADAEEASDSVAISITSLSQTTIRLPVVSKMGVAGEPNNSVCSAMPIMPNVNNYYLADDTTDWYRVTLDSAAQLKVKLSGFMVEGQLVAYGGNCAAPGNPIGHNGDLGIVPNRELNLGLQPAGTYFIWVIANTVSASTAPYTLRVESTP
>NZ_LN890655.1|WP_095044346.1|3496661_3498566_+|hypothetical-protein
MLLVIGLAVIVVLGLTGGLRIGAAADNTTGVATTGVATTGVATTGVATTGAPLILSAHQPRRQDFFAGGDAEITVNITNTGSIPFQTVTVSGATFADCNRGNLGALAPGQSTSYTCGQDNVNQSVLNELQVNGSTGATTVNHKSNSFVKVLKPEVRITKTPQVQTIRQGATAFFTVTIYNTSDFVMTLEEVDDSLANDCDRNPTITVYLQPGDSLDYACSMANVQSPQATVATVRVRNPVTTTEYTASDVAWVELLDLEAVLTPQPATILEPGDLVTYTVELINTGSLPVTLVGLTTNKYGNILDPGNTQLEAADNTCLPQPTLPTLSPFGGSYTCSFIAPVEGQPSDFSVILTATARSQGLLDVTATTNATVQIINVPASMKVTLSADPPFINPPSQLITFSVSVENTSGADAINILAMADEFLGDLNGRGNCELPVQGLPAGYSYQCHFSTVVAGEVGQEKSRTISVEAESDDLIGEPLSVSEIVKVVITDQPTRYNYMPNVSDHTLDRTSCARPYPLRPDTQYFFRPPNQYDSTLPVEQREQDYFTFTLAESAAVRVELTNFVPLKGQLIIRPHVVGGSTPCGPSLGRNPDEALNKIVDLGTIPAGRYYIQLINDGPSNVADLYGLFVRVD
>NZ_LN890655.1|WP_095044347.1|3498715_3500416_+|protein-kinase
MAVASLFEDLLDQYKIEQLIAAKRYTDLFQAYDVDDDRLVRLDVVHAGLAEDSAFAGQFISRARALAQVRHSNIAPILHVGKTTGGAPYVTQAAIDGSPLSHRLEQLAQRTTPVNSIYALKLIRQLADALLLAERLEIFHYDLQPDNVLLKNVTRPTDDSVVLIDLFIPAERPTRTAAPEDTPNAAYLSPEQRAGRAVTAPSHVYSLGAMLYRLLAGHLPGGSVSMGDTVINRTFGRATALERDRGDLSPATYALIDRALRKDPRGRFPTIEAFVVALDDALAAEEVRLGSAAGNRAPADARPRPWIFALLVLALLLAVGAVAARNLVDRAPTAGPAATPTAGQTLVAVVASLTPAATDEPTAIPATTNADEAAPAVQDTTVPEPTVASPSPTPTPTPTAPPTSALPTATLEQPLVRVIFNLVNLRRGPGVGFATMGSVAGGELLEVVARNDDEADLWYLVVTADQRVGWIAEEVVQVTSVEALQDVPVAATIPPAPIILPTATVTPTPTVIAPFTVVPTIDPDDDNGGGEGGGTSEPPPPPTAEPTDIPGEPPTLTPPPLPTVES
>NZ_LN890655.1|WP_157913213.1|3500508_3503601_+|hypothetical-protein
MNTNKRRSRVWLWLLPLIVLAYQVAIVAAAAVPPTLDLNGDAPGADFSATFTEDEGAEAIVSVTGLTIDNGEDTTLTAAKATLTNMPDTVHESLAANAGATGLTVQYAEESGQLTIKGSASVDAYKEVLRTLTYHNTSQSPDFADRIVLVTVSDGQMTSLPATSTVAINAVNDAPVLDNSGEMTLVAINEDETASAGNSVMTIIKSAETGGEDRITDADEGSPEGIAVIETGSANGVWQYSITAGASWLPFDAVSNTSAVLLDGAARIRFVPNPNFSGSAGFSFRAWDQSGGRPNGSTGIDVSLNGGITPFSAESEMVTINILTANDLPLVDLNGPAADSDYATQFYESGAPAPIADPAATVSDEDHASLASLIVTLTNRPDGAAESLAATTTGTNITAAPYDPATGRLVLTGPDTTANFQQVVRLIAYNNTSVGPATVVRSVTVVANDGVNDGPVATSTIAVHPVNSAPVLAPAALALGNVAEDTTQPAGAMIAQLLAAAGDPITDADTGAQEGIAIIGADSVHGQWQYATANPPAGAADWLPVAPVSPTAALLLTDTSWLRFVPAPNYAGQSGNLTFRAWDRTSGANGLRDVDVSANGGTTAFSVNSGTLAAVVTPTNDLPIVAGLPAAPLLYVEDDDPMLLAGSTLTISDVDNTLLSSATVRLTNPLDGDAEWLLATTDGLGITAAYADGVLQLTGAASPAAYQQVLRSVSYWNASQDPSPDDRLIEFSAADNVSSGPTAGLVVQVQPVNDPPEIDLDGVGPGLDFVTTFFINRGPVLVSAQSMTVTDIDNTTLKSATVRITNPQDGQAEILAADITGVSNIKVSYDLAGNTLTLNGVDSLANYQRVLRTVTYNNTLPQPDTATRQIEFILADSAGVSDARRTSLTFAVAPNARLLLPMVTWAYPRSEEPNDTCAQALGLMLNNDQSFQADDENDWFYFDLPAAADVVVEMHDFTPLTGQIVVAAESEPGQGCKNPRFLANNGSSDSDKFVPLGQQPAGRYYVWVINDGLQSAEAIYRLYIRAVPPA
>NZ_LN890655.1|WP_095044349.1|3503666_3504644_+|phage-integrase-N-terminal-SAM-like-domain-containing-protein
MESTGQRELFTTPPDGDEKAGRGSTLSREASLQAAMGTFERHMQDEGFSINTVKAFSSDIRLLGRYLGIGTPIGEIGTKNLNDFMRWLTDERGVPCSPKSFARRVTTLKVFFGWLHETGVLPQDPSAAVIQTSVTSPLPEAPDALDVGRALAVAEAWRAGGPERKPDARPYLLLTLLLQTGIKKGEAMAIVPNHIDDSDREHPLLYVRYANPRLRYKERKVPLEPAWLDVLAEYLAQYQPTDTLFTCTARNLEYILHDIAEAAELPPGVLSFENLRWAAALQDWRADVEQDDIRQKLGLSKIAWRETKTKLRRLIEREQIDALPA
>NZ_LN890655.1|WP_095044350.1|3504787_3505177_-|hypothetical-protein
MDIRFFDDPLEPPRPREDVRIRQIGLFIYPDLRRMAFGVELTPFVERPSIEVQITNGEGAPAGSLHVIETVTPNFSLTMHLRDAQTINPYQLTATLYYSWPDREKIEIERREVTFEVSEPGEQLFKFDD
>NZ_LN890655.1|WP_095044921.1|3505192_3508240_-|transcription-repair-coupling-factor
MRAFDPTTQRSLGPADSVIITPARELLPAAARDFVEVWADEPLPTEASLPSWRDDLKNLREGVAFGNLEYYLPLAYPRPVTLLDYLTPDALVIVDDWDELQVVAGELIDHARQIEAEQTDLPPGYRNPLFTWDEIGSELAWWQPLVLGEGRPGGTNDAEEPLYIELGEAFDPGPRYGGQMRPFLNQLKQARREGERVVVFSRQATRLAELWGEDGGTLIRALEPLTHAGESDMVDAVVTAIDAGTGRSGVVPLDALPDVPPGGSITFVQGSLPEGFILVRQEDHHVLLHLLTDAEIFGWSRPAPRRQRKARPTAPETFFADIKQGDYIVHLDYGIGRFEGLVVRNLGGMEREYLLVKYANGDTLYVPVHHADRLGKWIGPDDADPTLNRLGERTWTQARAAAQRAADELAQELLDLYAARETIPGHAFPGDTDWQAELEAAFPYHETEDQLRVISEVKDDMERPNPMDRLICGDVGYGKTEVALRAAFKAVMDGKQVAMLVPTTILAQQHYTNFRDRLAPFPASVEMLSRFRTPTRQRQIVQKLREGQIDIVIGTHRLLSDDVSFKDLGLVIIDEEQRFGVADKERLKQWRTEVDVLTLTATPIPRTLHMALTGVRDISIIDTAPAERLPVETYVGEADDSRIRTAILRELDRGGQIFFVHNRVQSIHIVRKRLEKLVPEARITVAHGQMSERQLEKIMIDFAEANIDILLSTTIIESGLDFPNANTLIVDRAEQFGLSQLYQLRGRVGRATRRAYAYFFHAPWRSLTADAQARLETIAEHTQLGAGYYIAVRDMEIRGAGDFLGGMQSGHIASVGFDMYTRLLTKAVKRRKAELRGETVTAELPDNVLIDLPLATYIPTDYVPDTQLRLRLYRRMATLDTLAEIDEMAAELADRFGPIPDPVHNLLYQIRIKALAQAAGVNAVVTEAGQIRIRIAELGGVDRYHLQRYLGEDVRVSKSAIWLKKERATHEWQIELVQVLEKFRLFERGTPAQRDRPAGADIPQDEAADEPTAAD

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LN890655_6	6.75\|2639771\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2639771-2639805	35	NZ_LN890657.1	19259-19293	1	0.971

1. spacer 6.75|2639771|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to position: 19259-19293, mismatch: 1, identity: 0.971

cagatcgtggcgtcggcgaccgacatcatctccct	CRISPR spacer
cagatcgtggcgtcggcgaccgacatcatctctct	Protospacer
********************************.**

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LN890655_6	6.75\|2639771\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2639771-2639805	35	NZ_LN890657	Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence	19259-19293	1	0.971
NZ_LN890655_1	1.1\|51627\|26\|NZ_LN890655\|CRISPRCasFinder	51627-51652	26	NZ_CP012988	Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence	188866-188891	5	0.808
NZ_LN890655_1	1.1\|51627\|26\|NZ_LN890655\|CRISPRCasFinder	51627-51652	26	NZ_CP024543	Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence	41159-41184	5	0.808
NZ_LN890655_1	1.1\|51627\|26\|NZ_LN890655\|CRISPRCasFinder	51627-51652	26	NZ_CP012993	Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence	188866-188891	5	0.808
NZ_LN890655_6	6.37\|2636991\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2636991-2637025	35	NZ_CP034351	Streptomyces sp. W1SF4 plasmid p1, complete sequence	206926-206960	7	0.8
NZ_LN890655_6	6.130\|2643816\|37\|NZ_LN890655\|CRISPRCasFinder,CRT,PILER-CR	2643816-2643852	37	NZ_CP028919	Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence	181855-181891	8	0.784
NZ_LN890655_6	6.9\|2634941\|36\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2634941-2634976	36	NC_007974	Cupriavidus metallidurans CH34 megaplasmid, complete sequence	1125275-1125310	9	0.75
NZ_LN890655_6	6.9\|2634941\|36\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2634941-2634976	36	NZ_CP046333	Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3	2490913-2490948	9	0.75
NZ_LN890655_6	6.37\|2636991\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2636991-2637025	35	KU204984	Pseudomonas phage AAT-1, complete genome	28549-28583	9	0.743
NZ_LN890655_6	6.67\|2639188\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2639188-2639222	35	NZ_CP035002	Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence	717642-717676	9	0.743
NZ_LN890655_6	6.88\|2640730\|37\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2640730-2640766	37	MN010758	Gordonia phage Dardanus, complete genome	30711-30747	9	0.757
NZ_LN890655_7	7.6\|3486171\|38\|NZ_LN890655\|CRISPRCasFinder,CRT	3486171-3486208	38	NZ_CP017942	Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence	496750-496787	9	0.763
NZ_LN890655_6	6.67\|2639188\|35\|NZ_LN890655\|PILER-CR,CRISPRCasFinder,CRT	2639188-2639222	35	CP000619	Burkholderia vietnamiensis G4 plasmid pBVIE03, complete sequence	78370-78404	10	0.714
NZ_LN890655_6	6.119\|2643008\|37\|NZ_LN890655\|CRISPRCasFinder,CRT	2643008-2643044	37	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	1048553-1048589	10	0.73
NZ_LN890655_6	6.132\|2643964\|37\|NZ_LN890655\|CRISPRCasFinder,CRT,PILER-CR	2643964-2644000	37	EU246945	Lactobacillus phage Lrm1, complete sequence	21567-21603	12	0.676
NZ_LN890655_6	6.132\|2643964\|37\|NZ_LN890655\|CRISPRCasFinder,CRT,PILER-CR	2643964-2644000	37	NC_011104	Lactobacillus phage Lrm1, complete genome	21567-21603	12	0.676

1. spacer 6.75|2639771|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN890657 (Candidatus Promineofilum breve strain Cfx-K plasmid III, complete sequence) position: , mismatch: 1, identity: 0.971

cagatcgtggcgtcggcgaccgacatcatctccct	CRISPR spacer
cagatcgtggcgtcggcgaccgacatcatctctct	Protospacer
********************************.**

2. spacer 1.1|51627|26|NZ_LN890655|CRISPRCasFinder matches to NZ_CP012988 (Klebsiella pneumoniae strain KpN01 plasmid pKpN01-CTX, complete sequence) position: , mismatch: 5, identity: 0.808

caacttaactcgaagccgcgcaaccc	CRISPR spacer
aaacttaactcgatgccgcgcagcaa	Protospacer
 ************ ********.*

3. spacer 1.1|51627|26|NZ_LN890655|CRISPRCasFinder matches to NZ_CP024543 (Klebsiella pneumoniae strain INF042 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.808

caacttaactcgaagccgcgcaaccc	CRISPR spacer
aaacttaactcgatgccgcgcagcaa	Protospacer
 ************ ********.*

4. spacer 1.1|51627|26|NZ_LN890655|CRISPRCasFinder matches to NZ_CP012993 (Klebsiella pneumoniae strain KpN06 plasmid pKpN06-CTX, complete sequence) position: , mismatch: 5, identity: 0.808

caacttaactcgaagccgcgcaaccc	CRISPR spacer
aaacttaactcgatgccgcgcagcaa	Protospacer
 ************ ********.*

5. spacer 6.37|2636991|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034351 (Streptomyces sp. W1SF4 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.8

ctggtcttcgcccacaatcagcgaggccgcctcgt	CRISPR spacer
ccggtaggcgcccacgatcagcgaggtcgcctcct	Protospacer
*.***   *******.**********.****** *

6. spacer 6.130|2643816|37|NZ_LN890655|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028919 (Gemmobacter sp. HYN0069 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

ctgacctgttcgccgcggcggtcgatttccacgtatc-	CRISPR spacer
tcgacctgtttgccgaggcggtcgatttcc-tgcgtca	Protospacer
..********.**** ************** .*..**

7. spacer 6.9|2634941|36|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to NC_007974 (Cupriavidus metallidurans CH34 megaplasmid, complete sequence) position: , mismatch: 9, identity: 0.75

ggcagggcatcggccgcgccatgctcgaccaactgc	CRISPR spacer
cgcacggcctcggccgcgccatgctcgttcggcccc	Protospacer
 *** *** ****************** .*..*. *

8. spacer 6.9|2634941|36|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046333 (Cupriavidus metallidurans strain FDAARGOS_675 plasmid unnamed3) position: , mismatch: 9, identity: 0.75

ggcagggcatcggccgcgccatgctcgaccaactgc	CRISPR spacer
cgcacggcctcggccgcgccatgctcgttcggcccc	Protospacer
 *** *** ****************** .*..*. *

9. spacer 6.37|2636991|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to KU204984 (Pseudomonas phage AAT-1, complete genome) position: , mismatch: 9, identity: 0.743

ctggtcttcgcccacaatcagcgaggccgcctcgt	CRISPR spacer
gaagacgtcgcccacgttcagcgaggccgccttgc	Protospacer
  .* * ********. ***************.*.

10. spacer 6.67|2639188|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035002 (Rhizobium acidisoli strain FH23 plasmid pRapFH23d, complete sequence) position: , mismatch: 9, identity: 0.743

----ccgcattccccgcgttcgtcaccagcggcagccgc	CRISPR spacer
aacgcaaaat----cgcgatcgtcaccggcggcagccgc	Protospacer
    * . **    **** ********.***********

11. spacer 6.88|2640730|37|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to MN010758 (Gordonia phage Dardanus, complete genome) position: , mismatch: 9, identity: 0.757

gcgccggcggatgacgcgccggccga---ggagtaagaca	CRISPR spacer
gcgccggcggacgaggcgccggccgactcggcgcctg---	Protospacer
***********.** ***********   ** *.  *

12. spacer 7.6|3486171|38|NZ_LN890655|CRISPRCasFinder,CRT matches to NZ_CP017942 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.763

gtaacggtaagcgacgtagatgatcccggcgatgccga	CRISPR spacer
gcgaaagtaagcgacgttgatgatcccggccatgcttg	Protospacer
*..* .*********** ************ ****. .

13. spacer 6.67|2639188|35|NZ_LN890655|PILER-CR,CRISPRCasFinder,CRT matches to CP000619 (Burkholderia vietnamiensis G4 plasmid pBVIE03, complete sequence) position: , mismatch: 10, identity: 0.714

ccgcattccccgcgttcgtcaccagcggcagccgc	CRISPR spacer
ctggcggttacgcggtcgtcaccagctgcagccgc	Protospacer
*.*    .. **** *********** ********

14. spacer 6.119|2643008|37|NZ_LN890655|CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 10, identity: 0.73

acgagatgcggcgcgccgggcgactggaggagattgg	CRISPR spacer
gcgagatacggcgcgccgcgcgactggcaatcgttga	Protospacer
.******.********** ******** ..  .***.

15. spacer 6.132|2643964|37|NZ_LN890655|CRISPRCasFinder,CRT,PILER-CR matches to EU246945 (Lactobacillus phage Lrm1, complete sequence) position: , mismatch: 12, identity: 0.676

gcaaccgggccacgatttcggctttgcgctcttcgat	CRISPR spacer
tgctttgcgcctcgatttcggctttgcgcttttctga	Protospacer
    ..* *** ******************.*** .

16. spacer 6.132|2643964|37|NZ_LN890655|CRISPRCasFinder,CRT,PILER-CR matches to NC_011104 (Lactobacillus phage Lrm1, complete genome) position: , mismatch: 12, identity: 0.676

gcaaccgggccacgatttcggctttgcgctcttcgat	CRISPR spacer
tgctttgcgcctcgatttcggctttgcgcttttctga	Protospacer
    ..* *** ******************.*** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2567626 : 2611315

Bifidobacterium_phage(50.0%)

tail,holin,integrase,capsid

attL 2570058:2570075|attR 2614807:2614824

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095043607.1\|2567626_2567938_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_095043608.1\|2567938_2568925_+	hypothetical protein	NA	NA	NA	NA
WP_157913090.1\|2569031_2569250_+	hypothetical protein	NA	NA	NA	NA
WP_157913091.1\|2569249_2569417_+	hypothetical protein	NA	NA	NA	NA
WP_157913092.1\|2569557_2570178_+	hypothetical protein	NA	NA	NA	NA
2570058:2570075	attL	NA	NA	NA	NA
WP_157913093.1\|2570209_2570650_+	hypothetical protein	NA	NA	NA	NA
WP_095043612.1\|2570663_2571788_+\|capsid	major capsid protein	NA	NA	NA	NA
WP_157913094.1\|2571798_2572071_+	hypothetical protein	NA	NA	NA	NA
WP_157913095.1\|2572251_2572590_+	hypothetical protein	NA	NA	NA	NA
WP_095043615.1\|2572586_2573009_+	hypothetical protein	NA	NA	NA	NA
WP_157913096.1\|2572995_2573385_+	hypothetical protein	NA	NA	NA	NA
WP_157913097.1\|2573381_2573750_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_095043617.1\|2573805_2574225_+	hypothetical protein	NA	NA	NA	NA
WP_157913098.1\|2574256_2574604_+	hypothetical protein	NA	NA	NA	NA
WP_095043619.1\|2574656_2575118_+	hypothetical protein	NA	NA	NA	NA
WP_095043620.1\|2575216_2575699_+	hypothetical protein	NA	NA	NA	NA
WP_102136592.1\|2575809_2576022_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_095043622.1\|2576089_2584525_+\|tail	phage tail tape measure protein	I3NL90	Bifidobacterium_phage	7.0e-28	30.1
WP_095043623.1\|2584521_2586390_+	hypothetical protein	NA	NA	NA	NA
WP_157913099.1\|2586449_2587094_+	hypothetical protein	NA	NA	NA	NA
WP_095043625.1\|2587103_2587376_+	hypothetical protein	NA	NA	NA	NA
WP_157913100.1\|2587397_2588570_+	hypothetical protein	NA	NA	NA	NA
WP_157913101.1\|2588644_2589841_+	hypothetical protein	NA	NA	NA	NA
WP_095043628.1\|2589837_2590389_+	hypothetical protein	NA	NA	NA	NA
WP_157913102.1\|2590398_2590725_+	hypothetical protein	NA	NA	NA	NA
WP_095043630.1\|2590717_2591245_+	hypothetical protein	NA	NA	NA	NA
WP_095043631.1\|2591314_2592943_+	hypothetical protein	NA	NA	NA	NA
WP_095043632.1\|2592980_2593415_+	hypothetical protein	NA	NA	NA	NA
WP_095043633.1\|2593787_2594495_-	hypothetical protein	NA	NA	NA	NA
WP_095043634.1\|2594550_2594799_-	hypothetical protein	NA	NA	NA	NA
WP_095043635.1\|2595168_2596242_-	hypothetical protein	NA	NA	NA	NA
WP_095043636.1\|2596358_2597039_-	hypothetical protein	NA	NA	NA	NA
WP_095043637.1\|2597105_2597558_-	hypothetical protein	NA	NA	NA	NA
WP_095043638.1\|2597600_2598041_-	hypothetical protein	NA	NA	NA	NA
WP_095043639.1\|2598123_2598357_-	hypothetical protein	NA	NA	NA	NA
WP_095043640.1\|2598371_2599280_-	DNA adenine methylase	A0A068CCE6	Rhizobium_phage	5.0e-49	41.4
WP_162292482.1\|2599276_2600701_-	hypothetical protein	NA	NA	NA	NA
WP_162292483.1\|2600837_2601731_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_095043643.1\|2602144_2602507_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_095043644.1\|2603048_2604827_+	hypothetical protein	NA	NA	NA	NA
WP_095043645.1\|2604944_2605736_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_095043646.1\|2605757_2607083_+	ferric reductase-like transmembrane domain-containing protein	NA	NA	NA	NA
WP_095043647.1\|2607096_2607795_+	hypothetical protein	NA	NA	NA	NA
WP_095043648.1\|2607822_2608380_+	YqhA family protein	NA	NA	NA	NA
WP_095043649.1\|2608376_2609762_+	DUF2252 domain-containing protein	NA	NA	NA	NA
WP_095043650.1\|2609947_2610475_+	hypothetical protein	NA	NA	NA	NA
WP_095043651.1\|2610709_2611315_+\|holin	phage holin family protein	NA	NA	NA	NA
2614807:2614824	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_LN890657

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

26580 : 34646

Gordonia_phage(14.29%)

terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_095045735.1\|26580_28278_-	hypothetical protein	A0A142K9R3	Gordonia_phage	3.5e-27	26.8
WP_157913397.1\|28267_29737_-	hypothetical protein	A0A1B0XTI8	Freshwater_phage	2.4e-53	33.9
WP_157913398.1\|29739_31311_-\|terminase	terminase	Q775B9	Bordetella_phage	6.1e-103	43.8
WP_095045738.1\|31288_31885_-\|terminase	terminase small subunit	A7J290	Streptococcus_phage	4.2e-12	55.6
WP_095045739.1\|31891_32251_-	DNA adenine methylase	Q5QF26	Pseudomonas_virus	5.8e-17	48.2
WP_157913399.1\|32448_32658_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_095045740.1\|32668_33589_+	PriCT-2 domain-containing protein	A0A2D1GMG5	Marinobacter_phage	2.6e-21	44.4
WP_157913400.1\|33572_34646_+	AAA family ATPase	A0A1B1ITP1	uncultured_Mediterranean_phage	4.0e-05	25.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage