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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT220504 Lactobacillus rhamnosus strain BPL5 chromosome I 6 crisprs csa3,DEDDh,DinG,cas3,c2c9_V-U4,WYL,cas14j,cas1,cas2,csn2 1 20 5 0

Results visualization

1. NZ_LT220504
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_1 11-1224 Orphan NA
18 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_2 431105-431257 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_3 698858-699002 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_4 1295841-1295986 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_5 1874292-1874370 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT220504_6 3009770-3011392 TypeII-A NA
24 spacers
csn2,cas2,cas1

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_LT220504_2 2.1|431155|53|NZ_LT220504|CRISPRCasFinder 431155-431207 53 NZ_LT220504.1 2348080-2348132 2 0.962
NZ_LT220504_2 2.1|431155|53|NZ_LT220504|CRISPRCasFinder 431155-431207 53 NZ_LT220504.1 1508931-1508983 2 0.962

1. spacer 2.1|431155|53|NZ_LT220504|CRISPRCasFinder matches to position: 2348080-2348132, mismatch: 2, identity: 0.962

taagcgtgatggccgggctttggccattgcgcccaaggtccttacacgcagac	CRISPR spacer
taagcgtgatggccgggctttggccattgcgcttaaggtccttacacgcagac	Protospacer
********************************..*******************

2. spacer 2.1|431155|53|NZ_LT220504|CRISPRCasFinder matches to position: 1508931-1508983, mismatch: 2, identity: 0.962

taagcgtgatggccgggctttggccattgcgcccaaggtccttacacgcagac	CRISPR spacer
taagcgtgatggccgggctttggccattgcgcttaaggtccttacacgcagac	Protospacer
********************************..*******************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 NZ_CP049700 Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence 275586-275615 6 0.8
NZ_LT220504_1 1.7|445|30|NZ_LT220504|CRISPRCasFinder,CRT 445-474 30 NZ_CP020529 Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence 161363-161392 6 0.8
NZ_LT220504_1 1.11|765|29|NZ_LT220504|CRISPRCasFinder,CRT 765-793 29 MN694194 Marine virus AFVG_250M1056, complete genome 21087-21115 6 0.793
NZ_LT220504_1 1.11|765|29|NZ_LT220504|CRISPRCasFinder,CRT 765-793 29 MN693636 Marine virus AFVG_250M1057, complete genome 21065-21093 6 0.793
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250021 Prevotella phage Lak-B2, complete genome 273651-273680 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250024 Prevotella phage Lak-B5, complete genome 267671-267700 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250028 Prevotella phage Lak-B9, complete genome 272561-272590 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250023 Prevotella phage Lak-B4, complete genome 273990-274019 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250025 Prevotella phage Lak-B6, complete genome 270863-270892 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250022 Prevotella phage Lak-B3, complete genome 270878-270907 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250027 Prevotella phage Lak-B8, complete genome 272689-272718 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250026 Prevotella phage Lak-B7, complete genome 271747-271776 6 0.8
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 MK250020 Prevotella phage Lak-B1, complete genome 272544-272573 6 0.8
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 NZ_CP049700 Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence 275586-275615 6 0.8
NZ_LT220504_6 6.15|3010601|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010601-3010630 30 NZ_CP020529 Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence 161363-161392 6 0.8
NZ_LT220504_1 1.2|114|30|NZ_LT220504|CRISPRCasFinder,CRT 114-143 30 NZ_LR215005 Mycoplasma conjunctivae strain NCTC10147 plasmid 9 105993-106022 7 0.767
NZ_LT220504_1 1.3|180|31|NZ_LT220504|CRISPRCasFinder,CRT 180-210 31 CP027479 Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence 46704-46734 7 0.774
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 JQ659259 Leuconostoc phage Lmd1, complete genome 18046-18075 7 0.767
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 MN552146 Leuconostoc phage P965, complete genome 16984-17013 7 0.767
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 KC013023 Leuconostoc phage phiLN04, complete genome 18242-18271 7 0.767
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 NC_024380 Leuconostoc phage phiLN6B, complete genome 17574-17603 7 0.767
NZ_LT220504_1 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT 247-276 30 KC013021 Leuconostoc phage P793, complete genome 17177-17206 7 0.767
NZ_LT220504_6 6.10|3010270|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010270-3010299 30 NZ_LR215005 Mycoplasma conjunctivae strain NCTC10147 plasmid 9 105993-106022 7 0.767
NZ_LT220504_6 6.11|3010336|31|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010336-3010366 31 CP027479 Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence 46704-46734 7 0.774
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 JQ659259 Leuconostoc phage Lmd1, complete genome 18046-18075 7 0.767
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 MN552146 Leuconostoc phage P965, complete genome 16984-17013 7 0.767
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 KC013023 Leuconostoc phage phiLN04, complete genome 18242-18271 7 0.767
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 NC_024380 Leuconostoc phage phiLN6B, complete genome 17574-17603 7 0.767
NZ_LT220504_6 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010403-3010432 30 KC013021 Leuconostoc phage P793, complete genome 17177-17206 7 0.767
NZ_LT220504_6 6.20|3010931|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010931-3010960 30 MN694194 Marine virus AFVG_250M1056, complete genome 21086-21115 7 0.767
NZ_LT220504_6 6.20|3010931|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010931-3010960 30 MN693636 Marine virus AFVG_250M1057, complete genome 21064-21093 7 0.767
NZ_LT220504_6 6.26|3011327|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011327-3011356 30 MN693763 Marine virus AFVG_250M1147, complete genome 7396-7425 7 0.767
NZ_LT220504_6 6.26|3011327|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011327-3011356 30 MN693699 Marine virus AFVG_250M1146, complete genome 30275-30304 7 0.767
NZ_LT220504_1 1.7|445|30|NZ_LT220504|CRISPRCasFinder,CRT 445-474 30 NZ_CP006570 Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence 39467-39496 8 0.733
NZ_LT220504_1 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT 895-924 30 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1215327-1215356 8 0.733
NZ_LT220504_1 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT 895-924 30 NZ_CP049244 Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence 41140-41169 8 0.733
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 NC_019401 Cronobacter phage vB_CsaM_GAP32, complete genome 300413-300442 8 0.733
NZ_LT220504_6 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT 3010072-3010101 30 NZ_CP017198 Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-1, complete genome 16365-16394 8 0.733
NZ_LT220504_6 6.9|3010204|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010204-3010233 30 MT375529 Pelagibacter phage Kolga EXVC01, complete genome 2095-2124 8 0.733
NZ_LT220504_6 6.9|3010204|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010204-3010233 30 MT375519 Pelagibacter phage Aegir EXVC01, complete genome 17246-17275 8 0.733
NZ_LT220504_6 6.15|3010601|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010601-3010630 30 NZ_CP006570 Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence 39467-39496 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 NZ_CP053952 Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence 432017-432046 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 NZ_CP053949 Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence 82075-82104 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 KU737345 Bacillus phage Juglone, complete genome 95035-95064 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 KJ489402 Bacillus phage Riley, complete genome 93099-93128 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 MF765814 Bacillus phage Taffo16, complete genome 94583-94612 8 0.733
NZ_LT220504_6 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3010733-3010762 30 NC_028887 Bacillus phage AvesoBmore, complete genome 95735-95764 8 0.733
NZ_LT220504_6 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011063-3011092 30 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 1215327-1215356 8 0.733
NZ_LT220504_6 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011063-3011092 30 NZ_CP049244 Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence 41140-41169 8 0.733
NZ_LT220504_1 1.1|47|31|NZ_LT220504|CRISPRCasFinder,CRT 47-77 31 MT375529 Pelagibacter phage Kolga EXVC01, complete genome 2095-2125 9 0.71
NZ_LT220504_1 1.1|47|31|NZ_LT220504|CRISPRCasFinder,CRT 47-77 31 MT375519 Pelagibacter phage Aegir EXVC01, complete genome 17246-17276 9 0.71
NZ_LT220504_1 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT 895-924 30 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 59090-59119 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MN393473 Shigella phage Sfin-6, complete genome 16366-16395 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MF468274 Shigella phage Sfin-1, complete genome 46413-46442 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MK972831 Shigella phage Sfin-2, partial genome 9870-9899 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MN694342 Marine virus AFVG_250M976, complete genome 10825-10854 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MG049919 Shigella phage vB_SflS-ISF001, complete genome 24917-24946 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 NC_049832 Escherichia phage vB_EcoS-DELF2 DNA, complete genome 46949-46978 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 NC_041995 Shigella phage vB_SsoS-ISF002, complete genome 24937-24966 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MN337573 Shigella phage Sfin-4, complete genome 24043-24072 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MN342247 Shigella phage Sfin-5, complete genome 15093-15122 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 NC_049831 Shigella virus Sfin-3, complete genome 16086-16115 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MH917278 Shigella phage phi2457T, complete genome 20076-20105 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 MT682715 Escherichia phage vB_EcoS_Chapo, complete genome 19982-20011 9 0.7
NZ_LT220504_6 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011063-3011092 30 NZ_CP012748 Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence 59090-59119 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MN393473 Shigella phage Sfin-6, complete genome 16366-16395 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MF468274 Shigella phage Sfin-1, complete genome 46413-46442 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MK972831 Shigella phage Sfin-2, partial genome 9870-9899 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MN694342 Marine virus AFVG_250M976, complete genome 10825-10854 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MG049919 Shigella phage vB_SflS-ISF001, complete genome 24917-24946 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 NC_049832 Escherichia phage vB_EcoS-DELF2 DNA, complete genome 46949-46978 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 NC_041995 Shigella phage vB_SsoS-ISF002, complete genome 24937-24966 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MN337573 Shigella phage Sfin-4, complete genome 24043-24072 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MN342247 Shigella phage Sfin-5, complete genome 15093-15122 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 NC_049831 Shigella virus Sfin-3, complete genome 16086-16115 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MH917278 Shigella phage phi2457T, complete genome 20076-20105 9 0.7
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 MT682715 Escherichia phage vB_EcoS_Chapo, complete genome 19982-20011 9 0.7
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 KP085586 Shigella phage pSf-2, complete genome 24617-24646 10 0.667
NZ_LT220504_1 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT 1026-1055 30 NC_047959 Enterobacteria phage vB_EcoS_IME18, complete genome 45812-45841 10 0.667
NZ_LT220504_1 1.21|114|35|NZ_LT220504|PILER-CR 114-148 35 NZ_LR215005 Mycoplasma conjunctivae strain NCTC10147 plasmid 9 105993-106027 10 0.714
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 KP085586 Shigella phage pSf-2, complete genome 24617-24646 10 0.667
NZ_LT220504_6 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR 3011195-3011224 30 NC_047959 Enterobacteria phage vB_EcoS_IME18, complete genome 45812-45841 10 0.667

1. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP049700 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence) position: , mismatch: 6, identity: 0.8

cattttggctattttgaagatggcaccacg-	CRISPR spacer
gtctttggctatttcgaagatggca-aacgt	Protospacer
  .***********.**********  *** 

2. spacer 1.7|445|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP020529 (Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gctcatgcgctccagaaaaggtcttattga	CRISPR spacer
gcagatgctctccagaaaagatcttatcgg	Protospacer
**  **** ***********.******.*.

3. spacer 1.11|765|29|NZ_LT220504|CRISPRCasFinder,CRT matches to MN694194 (Marine virus AFVG_250M1056, complete genome) position: , mismatch: 6, identity: 0.793

tttgaccctgcgtcccgtgtattttgttc	CRISPR spacer
ctttgcaatgcgtcccgtgtcttttgttc	Protospacer
.** .*  ************ ********

4. spacer 1.11|765|29|NZ_LT220504|CRISPRCasFinder,CRT matches to MN693636 (Marine virus AFVG_250M1057, complete genome) position: , mismatch: 6, identity: 0.793

tttgaccctgcgtcccgtgtattttgttc	CRISPR spacer
ctttgcaatgcgtcccgtgtcttttgttc	Protospacer
.** .*  ************ ********

5. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

6. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

7. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

8. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

9. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

10. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

11. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

12. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

13. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 6, identity: 0.8

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttattcgtttatcaatgacagcatactaat	Protospacer
** *.   ****************** ***

14. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049700 (Bradyrhizobium sp. 1S5 strain 323S2 plasmid pB323S2a, complete sequence) position: , mismatch: 6, identity: 0.8

cattttggctattttgaagatggcaccacg-	CRISPR spacer
gtctttggctatttcgaagatggca-aacgt	Protospacer
  .***********.**********  *** 

15. spacer 6.15|3010601|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020529 (Enterobacter cloacae strain 174 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.8

gctcatgcgctccagaaaaggtcttattga	CRISPR spacer
gcagatgctctccagaaaagatcttatcgg	Protospacer
**  **** ***********.******.*.

16. spacer 1.2|114|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 7, identity: 0.767

gagcaaaacattaaaaacatgcaaggcgat	CRISPR spacer
ttaagaaacattgaaaacatccaaggcgat	Protospacer
  . .*******.******* *********

17. spacer 1.3|180|31|NZ_LT220504|CRISPRCasFinder,CRT matches to CP027479 (Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

agtgtttgctgattacttggataccctcgcc	CRISPR spacer
cgctctggctgactacttggataccctcggc	Protospacer
 *. .* *****.**************** *

18. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to JQ659259 (Leuconostoc phage Lmd1, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

19. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MN552146 (Leuconostoc phage P965, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

20. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to KC013023 (Leuconostoc phage phiLN04, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

21. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_024380 (Leuconostoc phage phiLN6B, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

22. spacer 1.4|247|30|NZ_LT220504|CRISPRCasFinder,CRT matches to KC013021 (Leuconostoc phage P793, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

23. spacer 6.10|3010270|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 7, identity: 0.767

gagcaaaacattaaaaacatgcaaggcgat	CRISPR spacer
ttaagaaacattgaaaacatccaaggcgat	Protospacer
  . .*******.******* *********

24. spacer 6.11|3010336|31|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to CP027479 (Pseudomonas koreensis strain P19E3 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

agtgtttgctgattacttggataccctcgcc	CRISPR spacer
cgctctggctgactacttggataccctcggc	Protospacer
 *. .* *****.**************** *

25. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to JQ659259 (Leuconostoc phage Lmd1, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

26. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN552146 (Leuconostoc phage P965, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

27. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to KC013023 (Leuconostoc phage phiLN04, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

28. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_024380 (Leuconostoc phage phiLN6B, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

29. spacer 6.12|3010403|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to KC013021 (Leuconostoc phage P793, complete genome) position: , mismatch: 7, identity: 0.767

cattttggctattttgaagatggcaccacg	CRISPR spacer
gtatttggctatttggaagatggctctatg	Protospacer
   *********** ********* *.*.*

30. spacer 6.20|3010931|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN694194 (Marine virus AFVG_250M1056, complete genome) position: , mismatch: 7, identity: 0.767

tttgaccctgcgtcccgtgtattttgttcc	CRISPR spacer
ctttgcaatgcgtcccgtgtcttttgttcg	Protospacer
.** .*  ************ ******** 

31. spacer 6.20|3010931|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN693636 (Marine virus AFVG_250M1057, complete genome) position: , mismatch: 7, identity: 0.767

tttgaccctgcgtcccgtgtattttgttcc	CRISPR spacer
ctttgcaatgcgtcccgtgtcttttgttcg	Protospacer
.** .*  ************ ******** 

32. spacer 6.26|3011327|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN693763 (Marine virus AFVG_250M1147, complete genome) position: , mismatch: 7, identity: 0.767

gaaaaatggcgcaagattgtcgatcaagag	CRISPR spacer
gaagaatggcgcaagattgtctttgctcag	Protospacer
***.*****************  *    **

33. spacer 6.26|3011327|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN693699 (Marine virus AFVG_250M1146, complete genome) position: , mismatch: 7, identity: 0.767

gaaaaatggcgcaagattgtcgatcaagag	CRISPR spacer
gaagaatggcgcaagattgtctttgctcag	Protospacer
***.*****************  *    **

34. spacer 1.7|445|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 8, identity: 0.733

gctcatgcgctccagaaaaggtcttattga	CRISPR spacer
gctcatgcccgccagaaaaggtcacgctcg	Protospacer
******** * ************ ...* .

35. spacer 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
cagttcccggacttgctgcgccgtctgctc	Protospacer
 *.** ** *****************. ..

36. spacer 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
acattgcccgacttgcttagccgtcacgtc	Protospacer
* ***************  ******  ...

37. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 8, identity: 0.733

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
ttttaatattatcaattacagcattaatgg	Protospacer
**** *********** *******  . . 

38. spacer 6.7|3010072|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP017198 (Leuconostoc gelidum subsp. gasicomitatum strain TMW 2.1619 plasmid pL21619-1, complete genome) position: , mismatch: 8, identity: 0.733

ttttcatattatcaatgacagcatacgaat	CRISPR spacer
gtactttattatcaatcacagcataagaac	Protospacer
 * .. ********** ******** ***.

39. spacer 6.9|3010204|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 8, identity: 0.733

cgccaaacgctgaaacaggtgatgacaatg	CRISPR spacer
ttaaaaacgctgaaacaggtgataacgcag	Protospacer
.   *******************.**.  *

40. spacer 6.9|3010204|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MT375519 (Pelagibacter phage Aegir EXVC01, complete genome) position: , mismatch: 8, identity: 0.733

cgccaaacgctgaaacaggtgatgacaatg	CRISPR spacer
ttaaaaacgctgaaacaggtgataacgcag	Protospacer
.   *******************.**.  *

41. spacer 6.15|3010601|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006570 (Sodalis praecaptivus strain HS1 plasmid pHS1, complete sequence) position: , mismatch: 8, identity: 0.733

gctcatgcgctccagaaaaggtcttattga	CRISPR spacer
gctcatgcccgccagaaaaggtcacgctcg	Protospacer
******** * ************ ...* .

42. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053952 (Bacillus cereus strain FDAARGOS_798 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
ttctgcaaattgacaaacaactcttcatca	Protospacer
*..***** *************** *   .

43. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053949 (Bacillus cereus strain FDAARGOS_799 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
ttctgcaaattgacaaacaactcttcatca	Protospacer
*..***** *************** *   .

44. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to KU737345 (Bacillus phage Juglone, complete genome) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
gcttgcaacttgagaaataactctttacgt	Protospacer
 ************ ***.****** .  * 

45. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to KJ489402 (Bacillus phage Riley, complete genome) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
gcttgcaacttgagaaataactctttacgt	Protospacer
 ************ ***.****** .  * 

46. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MF765814 (Bacillus phage Taffo16, complete genome) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
gcttgcaacttgagaaataactctttacgt	Protospacer
 ************ ***.****** .  * 

47. spacer 6.17|3010733|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_028887 (Bacillus phage AvesoBmore, complete genome) position: , mismatch: 8, identity: 0.733

tcttgcaacttgacaaacaactctaccagg	CRISPR spacer
gcttgcaacttgagaaataactctttacgt	Protospacer
 ************ ***.****** .  * 

48. spacer 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
cagttcccggacttgctgcgccgtctgctc	Protospacer
 *.** ** *****************. ..

49. spacer 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049244 (Rhizobium pseudoryzae strain DSM 19479 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.733

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
acattgcccgacttgcttagccgtcacgtc	Protospacer
* ***************  ******  ...

50. spacer 1.1|47|31|NZ_LT220504|CRISPRCasFinder,CRT matches to MT375529 (Pelagibacter phage Kolga EXVC01, complete genome) position: , mismatch: 9, identity: 0.71

cgccaaacgctgaaacaggtgatgacaatgg	CRISPR spacer
ttaaaaacgctgaaacaggtgataacgcagc	Protospacer
.   *******************.**.  * 

51. spacer 1.1|47|31|NZ_LT220504|CRISPRCasFinder,CRT matches to MT375519 (Pelagibacter phage Aegir EXVC01, complete genome) position: , mismatch: 9, identity: 0.71

cgccaaacgctgaaacaggtgatgacaatgg	CRISPR spacer
ttaaaaacgctgaaacaggtgataacgcagc	Protospacer
.   *******************.**.  * 

52. spacer 1.13|895|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
ggcttgcccgccgtgctgcgccgtctcggc	Protospacer
.. ******* * ************* . .

53. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MN393473 (Shigella phage Sfin-6, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

54. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MF468274 (Shigella phage Sfin-1, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

55. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MK972831 (Shigella phage Sfin-2, partial genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

56. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MN694342 (Marine virus AFVG_250M976, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
cccgactatgacaatgatcgtttcattgcg	Protospacer
  . .* .************** ****** 

57. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MG049919 (Shigella phage vB_SflS-ISF001, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

58. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_049832 (Escherichia phage vB_EcoS-DELF2 DNA, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

59. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_041995 (Shigella phage vB_SsoS-ISF002, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

60. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MN337573 (Shigella phage Sfin-4, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

61. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MN342247 (Shigella phage Sfin-5, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

62. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_049831 (Shigella virus Sfin-3, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

63. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MH917278 (Shigella phage phi2457T, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

64. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to MT682715 (Escherichia phage vB_EcoS_Chapo, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

65. spacer 6.22|3011063|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

aaattgcccgacttgctgcgccgtctaact	CRISPR spacer
ggcttgcccgccgtgctgcgccgtctcggc	Protospacer
.. ******* * ************* . .

66. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN393473 (Shigella phage Sfin-6, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

67. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MF468274 (Shigella phage Sfin-1, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

68. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MK972831 (Shigella phage Sfin-2, partial genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

69. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN694342 (Marine virus AFVG_250M976, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
cccgactatgacaatgatcgtttcattgcg	Protospacer
  . .* .************** ****** 

70. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MG049919 (Shigella phage vB_SflS-ISF001, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

71. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_049832 (Escherichia phage vB_EcoS-DELF2 DNA, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

72. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_041995 (Shigella phage vB_SsoS-ISF002, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

73. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN337573 (Shigella phage Sfin-4, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

74. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MN342247 (Shigella phage Sfin-5, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

75. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_049831 (Shigella virus Sfin-3, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

76. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MH917278 (Shigella phage phi2457T, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

77. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to MT682715 (Escherichia phage vB_EcoS_Chapo, complete genome) position: , mismatch: 9, identity: 0.7

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgtacagtgaaaatgatcgttgcatcttc	Protospacer
.  *.****** **************. ..

78. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to KP085586 (Shigella phage pSf-2, complete genome) position: , mismatch: 10, identity: 0.667

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
tcgcacagtgaaaatgatcgttgcatcttc	Protospacer
   ..****** **************. ..

79. spacer 1.15|1026|30|NZ_LT220504|CRISPRCasFinder,CRT matches to NC_047959 (Enterobacteria phage vB_EcoS_IME18, complete genome) position: , mismatch: 10, identity: 0.667

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgcacagtgaaaatgatcgttgcatcttc	Protospacer
.  ..****** **************. ..

80. spacer 1.21|114|35|NZ_LT220504|PILER-CR matches to NZ_LR215005 (Mycoplasma conjunctivae strain NCTC10147 plasmid 9) position: , mismatch: 10, identity: 0.714

gagcaaaacattaaaaacatgcaaggcgatgtctc	CRISPR spacer
ttaagaaacattgaaaacatccaaggcgatgaagc	Protospacer
  . .*******.******* **********   *

81. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to KP085586 (Shigella phage pSf-2, complete genome) position: , mismatch: 10, identity: 0.667

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
tcgcacagtgaaaatgatcgttgcatcttc	Protospacer
   ..****** **************. ..

82. spacer 6.24|3011195|30|NZ_LT220504|CRISPRCasFinder,CRT,PILER-CR matches to NC_047959 (Enterobacteria phage vB_EcoS_IME18, complete genome) position: , mismatch: 10, identity: 0.667

aattgcagtgacaatgatcgttgcattgct	CRISPR spacer
gcgcacagtgaaaatgatcgttgcatcttc	Protospacer
.  ..****** **************. ..

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1077953 : 1149241 76 Lactobacillus_phage(59.62%) tail,head,integrase,transposase,portal,terminase,holin,plate attL 1107505:1107520|attR 1120225:1120240
DBSCAN-SWA_2 1179120 : 1210615 32 Streptococcus_phage(15.38%) tail,head,capsid,transposase,portal,terminase,tRNA NA
DBSCAN-SWA_3 1351612 : 1432286 96 Lactobacillus_phage(91.07%) tail,protease,head,integrase,capsid,transposase,portal,terminase,tRNA,holin attL 1389006:1389050|attR 1432374:1432418
DBSCAN-SWA_4 1860785 : 1905571 46 Lactobacillus_phage(40.0%) transposase,protease NA
DBSCAN-SWA_5 2752884 : 2805980 51 Bacillus_virus(14.29%) tRNA,protease,bacteriocin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage