CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT545678	Streptococcus agalactiae isolate SA111 chromosome I	1 crisprs	RT,cas3,DinG,cas9,cas1,cas2,csn2,csm6,DEDDh,csa3	0	4	13	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT545678_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT545678_1

971240-971671

TypeII

II-A

Consensus_repeat	Method
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	CRT

6 spacers

csn2,cas2,cas1,cas9

The CRISPR arrays of NZ_LT545678_1

>merge|NZ_LT545678|1|971240-971671|PILER-CR,CRISPRCasFinder,CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATGGCAATACAATCCTTATCGAGGTTCCAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTACGAAAAGGTTGTGATAAAAGCCATATCAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAAAGACTTAATAAAGAATTTGACAATGATCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTACTTGACGAATTGAAGATGACGGAATTTAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGGTTATACATTTACTAATCCATCAGCATTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGAGTTAACTAATTTTCATGCTATCACAAAGTTTTAGAGCTGTGCTGTTATTATGCTAGGGCACCA

>NZ_LT545678|1|1|971240-971605|PILER-CR
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGGCAATACAATCCTTATCGAGGTTCCAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACGAAAAGGTTGTGATAAAAGCCATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGACTTAATAAAGAATTTGACAATGATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_LT545678|1|1|971240-971605|CRISPRCasFinder
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGGCAATACAATCCTTATCGAGGTTCCAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACGAAAAGGTTGTGATAAAAGCCATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGACTTAATAAAGAATTTGACAATGATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC

>NZ_LT545678|1|1|971240-971671|CRT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	ATGGCAATACAATCCTTATCGAGGTTCCAG
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACGAAAAGGTTGTGATAAAAGCCATATCA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AAAGACTTAATAAAGAATTTGACAATGATC
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TACTTGACGAATTGAAGATGACGGAATTTA
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	TGGTTATACATTTACTAATCCATCAGCATT
GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	AGAGTTAACTAATTTTCATGCTATCACAAA
GTTTTAGAGCTGTGCTGTTATTATGCTAGGGCACCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT545678.1\|WP_069986186.1\|974838_977472_+\|pneumococcal-type-histidine-triad-protein	unknown	unknown	gnl\|CDD\|380193
NZ_LT545678.1\|WP_000191687.1\|977641_978817_-\|IS256-like-element-ISSag11-family-transposase	unknown	unknown	gnl\|CDD\|307151
NZ_LT545678.1\|WP_001019133.1\|972759_974592_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_LT545678.1\|WP_070001305.1\|978939_979551_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_LT545678.1\|WP_000653355.1\|964134_964791_+\|TIGR01906-family-membrane-protein	unknown	unknown	gnl\|CDD\|226884
NZ_LT545678.1\|WP_000065321.1\|983401_984505_+\|DUF2974-domain-containing-protein	unknown	unknown	gnl\|CDD\|371412
NZ_LT545678.1\|WP_001241816.1\|961029_961410_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131381
NZ_LT545678.1\|WP_000929489.1\|969279_970149_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_LT545678.1\|WP_000438312.1\|972207_972624_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_LT545678.1\|WP_069986597.1\|980609_983402_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_LT545678.1\|WP_000159234.1\|960633_961005_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_LT545678.1\|WP_001040098.1\|965165_969278_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_LT545678.1\|WP_000122194.1\|970145_970487_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_LT545678.1\|WP_000323544.1\|963374_964145_+\|TIGR01457-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319832
NZ_LT545678.1\|WP_000621142.1\|979559_980024_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LT545678.1\|WP_000665410.1\|980023_980458_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_LT545678.1\|WP_000590706.1\|970473_971139_+\|type-II-A-CRISPR-associated-protein-Csn2	csn2	pfam09711_csn2_CAS-II-A	gnl\|CDD\|213408
NZ_LT545678.1\|WP_000523795.1\|962636_963374_+\|acyl-ACP-thioesterase	unknown	unknown	gnl\|CDD\|366738
NZ_LT545678.1\|WP_000914659.1\|961502_962633_+\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_LT545678.1\|WP_000146565.1\|984624_985263_-\|CatB-related-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100040

Protein	Function_ID	Function_description	E-value
NZ_LT545678.1\|WP_069986186.1\|974838_977472_+\|pneumococcal-type-histidine-triad-protein	gnl\|CDD\|380193	NF033189, internalin_A, class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.	3.82155e-21
NZ_LT545678.1\|WP_000191687.1\|977641_978817_-\|IS256-like-element-ISSag11-family-transposase	gnl\|CDD\|307151	pfam00872, Transposase_mut, Transposase, Mutator family.	5.08212e-160
NZ_LT545678.1\|WP_001019133.1\|972759_974592_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_LT545678.1\|WP_070001305.1\|978939_979551_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	2.09273e-33
NZ_LT545678.1\|WP_000653355.1\|964134_964791_+\|TIGR01906-family-membrane-protein	gnl\|CDD\|226884	COG4478, COG4478, Predicted membrane protein [Function unknown].	8.37758e-51
NZ_LT545678.1\|WP_000065321.1\|983401_984505_+\|DUF2974-domain-containing-protein	gnl\|CDD\|371412	pfam11187, DUF2974, Protein of unknown function (DUF2974). This bacterial family of proteins has no known function.	1.82724e-105
NZ_LT545678.1\|WP_001241816.1\|961029_961410_+\|hypothetical-protein	gnl\|CDD\|131381	TIGR02328, TIGR02328, conserved hypothetical protein. Members of this protein are found in a small number of taxonomically well separated species, yet are strongly conserved, suggesting lateral gene transfer. Members are found in Treponema denticola, Clostridium acetobutylicum, and several of the Firmicutes. The function of this protein is unknown. [Hypothetical proteins, Conserved].	6.45558e-80
NZ_LT545678.1\|WP_000929489.1\|969279_970149_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.54315e-139
NZ_LT545678.1\|WP_000438312.1\|972207_972624_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	1.21474e-79
NZ_LT545678.1\|WP_069986597.1\|980609_983402_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_LT545678.1\|WP_000159234.1\|960633_961005_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	6.08694e-28
NZ_LT545678.1\|WP_001040098.1\|965165_969278_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_LT545678.1\|WP_000122194.1\|970145_970487_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.38084e-52
NZ_LT545678.1\|WP_000323544.1\|963374_964145_+\|TIGR01457-family-HAD-type-hydrolase	gnl\|CDD\|319832	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase. Escherichia coli UmpH/NagD is a ribonucleoside tri-, di-, and monophosphatase with a preference for purines, it shows peak activity with UMP and functions in UMP-degradation. It is also an effective phosphatase with AMP, GMP and CMP. Mycobacterium tuberculosis phosphatase, Rv1692 is a glycerol 3-phosphate phosphatase. Rv1692 is the final enzyme involved in glycerophospholipid recycling/catabolism. This subfamily belongs to the UmpH/NagD phosphatase family, and to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.19143e-132
NZ_LT545678.1\|WP_000621142.1\|979559_980024_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.91796e-19
NZ_LT545678.1\|WP_000665410.1\|980023_980458_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.40832e-86
NZ_LT545678.1\|WP_000590706.1\|970473_971139_+\|type-II-A-CRISPR-associated-protein-Csn2	gnl\|CDD\|213408	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2. Csn2 is a Nmeni subtype-specific Cas protein, which may function in the adaptation process which mediates the incorporation of foreign nucleic acids into the microbial host genome. Csn 2 may interact directly with double-stranded DNA. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA. Csn2 has been predicted to be a functional analog of Cas4 based on anti-correlated phyletic patterns; also known as SPy1049 family.	3.61399e-122
NZ_LT545678.1\|WP_000523795.1\|962636_963374_+\|acyl-ACP-thioesterase	gnl\|CDD\|366738	pfam01643, Acyl-ACP_TE, Acyl-ACP thioesterase. This family consists of various acyl-acyl carrier protein (ACP) thioesterases (TE) these terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid.	3.68196e-111
NZ_LT545678.1\|WP_000914659.1\|961502_962633_+\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_LT545678.1\|WP_000146565.1\|984624_985263_-\|CatB-related-O-acetyltransferase	gnl\|CDD\|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	6.8383e-72

>NZ_LT545678.1|WP_000590706.1|970473_971139_+|type-II-A-CRISPR-associated-protein-Csn2
MIKINFPILDEPLVLSNATILTIEDVSVYSSLVKHFYQYDVDEHLKLFDDKQKSLKATELMLVTDILGYDVNSAPILKLIHGDLENQFNEKPEVKSMVEKLAATITELIAFECLENELDLEYDEITILELIKALGVKIETQSDTIFEKCFEIIQVYHYLTKKNLLVFVNSGAYLTKDEVIKLCEYINLMQKSVLFLEPRRLYDLPQYVIDKDYFLIGENMV
>NZ_LT545678.1|WP_000122194.1|970145_970487_+|CRISPR-associated-endonuclease-Cas2
MSYRYMRMILMFDMPTETAEERKAYRKFRKFLLSEGFIMHQFSVYSKLLLNNTANNAMIGRLKVNNPKKGNITLLTVTEKQFARMVYLHGERNTSVANSDSRLVFLGDSYDQD
>NZ_LT545678.1|WP_000929489.1|969279_970149_+|type-II-CRISPR-associated-endonuclease-Cas1
MAGWRTVVVNTHSKLSYKNNHLIFKDSYQTEMIHLSEIDILIMETTDIVLSTMLIKRLVDENILVIFCDDKRLPTAMLMPYYARHDSSLQLSRQMSWIEDVKADVWTSIIAQKILNQSFYLGECSFFEKSQSIMNLYHDLEPFDPSNREGHAARIYFNTLFGNDFSREQDNPINAGLDYGYSLLLSMFAREVVKCGCMTQFGLKHANQFNQFNLASDIMEPFRPIVDRIIYENRQSDFVKMKRELFSMFSETYSYNGKEMYLSNIVSDYTKKVIKSLNSDGNGIPEFRI
>NZ_LT545678.1|WP_001040098.1|965165_969278_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MNKPYSIGLDIGTNSVGWSIITDDYKVPAKKMRVLGNTDKEYIKKNLIGALLFDGGNTAADRRLKRTARRRYTRRRNRILYLQEIFAEEMSKVDDSFFHRLEDSFLVEEDKRGSKYPIFATMQEEKYYHEKFPTIYHLRKELADKKEKADLRLIYLALAHIIKFRGHFLIEDDRFDVRNTDIQKQYQAFLEIFDTTFENNDLLSQNVDVEAILTDKISKSAKKDRILARYPNQKSTGIFAEFLKLIVGNQADFKKHFNLEDKTPLQFAKDSYDEDLENLLGQIGDEFADLFSAAKKLYDSVLLSGILTVTDLSTKAPLSASMIQRYDEHREDLKQLKQFVKASLPEKYQEIFADSSKDGYAGYIEGKTNQEAFYKYLSKLLTKQEGSEYLLEKIKNEDFLRKQRTFDNGSIPHQVHLTELRAIIRRQSEYYPFLKENLDRIEKILTFRIPYYVGPLAREKSDFAWMTRKTDDSIRPWNFEDLVDKEKSAEAFIHRMTNNDLYLPEEKVLPKHSLIYEKFTVYNELTKVRFLAEGFKDFQFLNRKQKETIFNSLFKEKRKVTEKDIISFLNKVDGYEGIAIKGIEKQFNASLSTYHDLKKILGKDFLDNTDNELILEDIVQTLTLFEDREMIRKRLDIYKDFFTESQLKKLYRRHYTGWGRLSAKLINGIRNKENQKTILDYLIDDGSANRNFMQLIKDAGLSFKPIIDKARTGSHSDNLKEVVGELAGSPAIKKGILQSLKIVDELVKVMGYEPEQIVVEMARENQTTAKGLSRSRQRLTTLRESLANLKSNILEEKKPKYVKDQVENHHLSDDRLFLYYLQNGKDMYTDDELDIDNLSQYDIDHIIPQAFIKDDSIDNRVLVSSAKNRGKSDDVPSVEIVKDCKVFWKKLLDAKLMSQRKYDNLTKAERGGLTSDDKARFIQRQLVETRQITKHVARILDERFNNELDSKGRRIRKVKIVTLKSNLVSNFRKEFGFYKIREVNNYHHAHDAYLNAVVAKAILTKYPQLEPEFVYGDYPKYNSYKTRKSATEKLFFYSNIMNFFKTKVTLADGTVVVKDDIEVNNDTGEIVWDKKKHFATVRKVLSYPQVNIVKKTEIQTGGFSKESILAHGNSDKLIPRKTKDIYLDPKKYGGFDSPIVAYSVLVVADIKKGKAQKLKTVTELLGITIMERSRFEKNPSAFLESKGYLNIRDDKLMILPKYSLFELENGRRRLLASAGELQKGNELALPTQFMKFLYLASRYNELKGKPEEIEQKQEFVVQHVSYFDDILQIINDFSNRVILADANLEKINKLYQDNKENIPVDELANNIINLFTFTSLGAPAAFKFFDKIVDRKRYTSTKEVLNSTLIHQSITGLYETRIDLGKLGED
>NZ_LT545678.1|WP_000653355.1|964134_964791_+|TIGR01906-family-membrane-protein
MKDKLLVVLTWIWIISLATLATIYIAWLIYPIEIQFLKLEKVVYLKAETIYYNFNKLMIYLTHPFISDLNMPSFPSSEDGLKHFADVKYLFTLAHGLFVILTFPVIYFLRHGWKQKSIFLYEGFFKIAIMLPIFIVVCAFLLGFDQFFTLFHEVLFPGDSTWQFNPLTDPVIWILPETFFLHCFIIFLLIYETITIILLIIGRKHLKLRKYKNKMQAL
>NZ_LT545678.1|WP_000323544.1|963374_964145_+|TIGR01457-family-HAD-type-hydrolase
MAYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLKKAIADAGYVEDTKNPAYVVVGLDWNVTYDKLATATLAIQNGALFIGTNPDLNIPTERGLLPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYVLASLDEWTFNEG
>NZ_LT545678.1|WP_000523795.1|962636_963374_+|acyl-ACP-thioesterase
MGLLYRETYEVPFYESDTNHYMKLPQLLALALQISAKQSLKLGIGDDIVFKRYGLVWVVTDYIIDIERLPKHAEKIVIETEAKAHNKLLCYRYFYIYGEDGQKIITISSAFVLMDFKTRKIHPVLDDITSIYQSQRIKKVIRGPKYHPIGDSKVKQYHVRYFDLDMNGHVNNSKYLEWMYDVLDLDFLSSHIPKKIDLKYIKEIQYGTDIKSHWYQDGLVTRHDIIGGDAIHAQARIEWQEKKED
>NZ_LT545678.1|WP_000914659.1|961502_962633_+|oxygen-independent-coproporphyrinogen-III-oxidase
MLKKPTSAYVHIPFCTQICYYCDFSKVFIKNQPVDAYLQALIREFRSYDITELRTLYIGGGTPTSISAVQLDYLLTELIRDLNLNTLEEFTIEANPGDLTVDKIEVLQKSAVNRVSLGVQTFNDKHLKRIGRSHNEAQIYSTIDALKTAGFQNISIDLIYALPGQTMDDVRSNVAKALSLNIPHLSLYSLILEHHTVFMNKMRRGKLHLPTEDLEAEMFEYIISEMERNGFEHYEISNFTKPGFESRHNLMYWENVEYYGVGAGASGYLDGIRYRNRGPIQHYLKGVSEGNARLSEEVLSKNEMMEEELFLGLRKKEGVSIGKFEQKFGTSFEKRYGQIVQELQSDGLLKENNGFIQMTKKGLFLGDTVAEKFIVE
>NZ_LT545678.1|WP_001241816.1|961029_961410_+|hypothetical-protein
MRLWHQDIIELLPRQQLLGQHRECCALRGNGWGRKHETVDYVFRYSPYRLFAYHQLVMEEMMERGYRVSKEWLIAEYRGMKCPRYDTLNPVDLETPIYPEHNQDYLQECLWNLKAKGIDLPINKIK
>NZ_LT545678.1|WP_000159234.1|960633_961005_+|YbgA-family-protein
MTKEAELLWAKHKYLVLSKSQKIYLDIRQTLKSPNCTVLDVQSLIDQAVLLEESPSQVTNAYMHIWGYFKNKAERQEKEEFLTLLEKYRKTGYQRRKLLAFLKQLLAKYPNSYLQNSSIFEEE
>NZ_LT545678.1|WP_000438312.1|972207_972624_+|nucleoside-diphosphate-kinase
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIGVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESAAREIAIWFNN
>NZ_LT545678.1|WP_001019133.1|972759_974592_+|elongation-factor-4
MNIEDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRAEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGEVDAPLQALIFDSVYDAYRGVILQVRIVNGMVKPGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYIAASIKTVADTRVGDTITLANNPAIEPLHGYKQMNPMVFAGLYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVNTTDGEMLEVSNPSEFPDPTRVDSIEEPYVKAQIMVPQEFVGAVMELAQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYEISEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKLIVDKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDDKK
>NZ_LT545678.1|WP_069986186.1|974838_977472_+|pneumococcal-type-histidine-triad-protein
MKGQKIIALAGLVLSCHFALTACHTQEHKNSHHIKTKQVAKKKANKKKVSVKESHKKRKGVAGVDFPTDDGFLLTKDSKILSHTDSGIVVAHGNHSHFIFYSDLKGSKFSYLIPNANTKTNKNQAVRNFKAGAVAVNTLNDGYVFNPADIVSEDANGYVVRHGDHFHYIPKASLSQQKQVQASRAVSRLGNQSNSHYRVNSSKIAGLHYPTSNGFLFNGRGIKGTTPTGILVEHHNHLHFISFADLRKGGWGSIADRYQPQKKADSKKQSPSSKKPRTENTLPKDIKDKLAYLARELHLDISRIRVLKTLNGEIGFEYPHDDHTHVIMAKDIDLSKPIPNPHHDDEDHHKGHHHDESDHKHEEHEHTKSNKLSDEDQKKLIYLAEKLGLNPNQIEVLTSEDGSIIFKYPHDDHSHTIASKDIEIGKPIPDGHHDHSHAKDKVGMATLKQIGFDDEIIQDILHADAPTPFPSNETNPEKMRQWLATVTKINIGQRTNPFQRFGLSLMPNIEVLGIGFTPINDMTPVLQFKKLKQLWMTNTGITDYSFLDKMPLLEGLDISQNGIKDLSFLTKYKQLSLIAAANNGITSLKPLAELPNLQFLVLSHNNISDLTPLSNLTKLQELHLDHNNVKNLSALSGKKDLKVLDLSNNKSADLSTLKTTSLETLLLNETNTSNLSFLKQNPKVSNLTINNAKLASLDGIEESDEIVKVEAEGNQIKSLVLKNKQGSLKFLNVTNNQLTSLEGVNNYTSLETLSVSKSKLESLDIKTPNKTVTNLDFSHNNVPTSQLKLNEKNIPEAVAKNFPAVVEGSMVGNGSLAEKAAMASKEDKQVSDNTNHQKNTEKSAQANADSKKENPKTHDEHHDHEETDHAHVGHHHH
>NZ_LT545678.1|WP_000191687.1|977641_978817_-|IS256-like-element-ISSag11-family-transposase
MTQFTTELLNFLAQKQDIDEFFRSSLETAMNDLLQVELSAFLGYEPYDKAGYNTGNSRNGAYTRRFETKYGVVNLLIPRDRNGEFSPALIPSYGRRDNHLEEMVIKLYQTGVTTREISDIIERMYGHHYSPATVSNISKATQENVASFHERSLEANYTVLYLDGTYLPLRRGTVSKECIHIALGVTSYGHKAILGYDIAPNENNASWSDLLERLKGQGVQQVSLVVTDGFNGLDQLIQQAFPMAKQQRCLVHIGRNIASKVKRADRALILEQFKTIYRAINVEEAKQALDSFINEWKPHYKKVIETLESIENLLIFYEFPHQIWGSIYSTNLIESLNKEIKRQTKKKVVFPNEESLERYLVTLFSDYNFKQGQRIHKGFGQCTDTLESLFD
>NZ_LT545678.1|WP_070001305.1|978939_979551_+|HD-domain-containing-protein
MVHHKLKNDPSGHDWFHIVRVRNLAVELAHKEGANTFICQMAALLHDIIDDKICQDSKQASYELTQWLYSQDLAIAEVEHILDILENISFKAGTGLTMKTLEGQIVQDADRLDAMGAIGIARTMAYSGSKGRLIHDPNLKPRENLTLEEYRNGQDTAIMHFYEKLLKLKDLMNTKQGKMLAQKRHDFLELYLAEFYAEWNGKR
>NZ_LT545678.1|WP_000621142.1|979559_980024_+|GNAT-family-N-acetyltransferase
MIRRAKEKDLPDIAELLKQILMLHHEVRPDIFHTRGSKFSKEQLKEMLIDESKPIFVYESDEGKVVAHLFLQLQEKRDLPRKSFKTLYIDDLCIDEEVRGQQIGQKLMDFARQYAKKHGCYNITLNVWNDNQRAVSFYEKLGFKPQQTQMEEIL
>NZ_LT545678.1|WP_000665410.1|980023_980458_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MKETQEELRQRIGHTAYQVTQNSATEHAFTGKYDDFFEEGIYVDIVSGEVLFSSLDKFQSGCGWPAFSKPIENRMVTNHQDHSHGMHRIEVRSRQADSHLGHVFNDGPVDAGGLRYCINSAALDFIPYDQMAKRGYGDYLSLFD
>NZ_LT545678.1|WP_069986597.1|980609_983402_+|cation-transporting-P-type-ATPase
MASTNNVSDTNTRFAKEELEEVFEELGTTQGGLSDEEVAVRQKKYGLNLLSEVKQESIILLFLKNFTSLMAILLWVGGFVAIVSNSLELGLAIWMVNVINGIFSFIQEYRASQATQALEKMLPSYSRVLRKSSEEKILSEQLVPGDIVLIEEGDRISADGRLIKTTDLQVNQSALTGESNPIYKDSNVENDQSKTLIECDNMVFAGTTVSSGSATMVVTAIGMQTQFGQIADLTQGMKSEKSPLQRELDWLTKQISIISITVGIIFFLAATFFVKEPVSKSFIFALGMIVAFIPEGLLPTVTLSLAMAVQRMAKEHALVKKLSSVETLGATSVICSDKTGTLTQNEMTVNHLWQNGKSYQVTGLGYAPEGQILFEGDNICFGNSDRGDLEKLIRFAHLCSNAQVLPPNDDRSTYTVLGDPTEACLNVLLEKSGINIQENRKFAPRLKELPFDSVRKRMTTIHSLGGDEKDKKISITKGAPKEILDLSDYVLSDGKVIPLNKEERNKIQLANDTFAKDGLRVLAVSYCDIEGFSKEQWTQENLEQHMVFIGLIAMSDPPREGVREAIDKCHAASIRIIMVTGDYGLTALSIAKNIGIIRNDDAKVISGLELSEMTDSQLKKELSGEVVFARVAPEQKYRVVTILQEMGEVVAVTGDGVNDAPALKKSDIGVAMGVTGTDVAKESADMILTDDHFASIVHAVEEGRAVYQNIKKFLTYIFNSNTPEAVPSAFFLFSKGFIPLPLTVMQILAVDLGTDMLPALGLGVEPPETDVMNRPPRRLTDRLLDKGLLIKSFLWYGTIESVLAMGGFFWAHYLRYGNFTFFVANGIPYREATTMTLGAIIFSQIGMVMNSRTSYQSIKALSIFGNKLINFGIIMEILAFLVLVYVPLFHNLFNTASLGLSHWLYLISCPFIMIGLDEVRKLFSSRKNKR
>NZ_LT545678.1|WP_000065321.1|983401_984505_+|DUF2974-domain-containing-protein
MSNIITYLKNNSNLTFDELALNDVDILCLNEFGYISFEKLINTTEMKSVLVCELYHEYLQTMAKSYSFMFTSQRHDLCQLMMTSKRFKNLTLSYYRAEISLEFEKQFAAMVFTIPNINYHQVVFRGTDANLIGWKEDFKLTYMREISAHRSAIKYLNTILPYFDKVVLSGHSKGGNLALYAAMFTKPDLKAKIDLIWLIDSPGLQKTLLPTTEYKTTKQKCIRLLPEESIVGMMLYSDIEPLIISSNARGILQHDVTTWEIQEPAILKTGTGLSLKSICFEKTFQQWMAELKSQERKLFFDLLFDSFLSSGVSSLDDFNLASRAKMMKAFHSFRELDDDKKRLFNKSLKLLVTIFWGAYHDNSRETK
>NZ_LT545678.1|WP_000146565.1|984624_985263_-|CatB-related-O-acetyltransferase
MASILKKHLEKRLELKNDPMRTDMSTGASYPKYGFSVGKYTYGYQQFFYEGVNLKEIGAFCSIAQNVTITGLNHPTDHITTNPFIYYKSRGFINEDRADLIDEKKNGKVIIGNDVWIGTNVTILPSVTIGNGAIIGAGSVITKDIPDYAVVAGTPAKIIKYRFSEEEITLLNASQWWNWSDEAIKEHISEFSDKKEFFNTLKSISENKNHKL

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	JX409895	Streptococcus phage JX01, complete genome	13311-13340	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MH853356	Streptococcus phage LF2, partial genome	16816-16845	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448973	Streptococcus phage Javan522, complete genome	3474-3503	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448955	Streptococcus phage Javan478, complete genome	3639-3668	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448953	Streptococcus phage Javan474, complete genome	3605-3634	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448859	Streptococcus phage Javan170, complete genome	3212-3241	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448778	Streptococcus phage Javan493, complete genome	3474-3503	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448850	Streptococcus phage Javan132, complete genome	3775-3804	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448676	Streptococcus phage Javan131, complete genome	3208-3237	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448975	Streptococcus phage Javan526, complete genome	3428-3457	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448688	Streptococcus phage Javan161, complete genome	3209-3238	0	1.0
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	MK448782	Streptococcus phage Javan501, complete genome	3767-3796	0	1.0
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	MK448837	Streptococcus phage Javan10, complete genome	6111-6140	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448971	Streptococcus phage Javan52, complete genome	15130-15159	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448829	Streptococcus phage Javan7, complete genome	11664-11693	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448956	Streptococcus phage Javan48, complete genome	13717-13746	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK449010	Streptococcus phage Javan90, complete genome	12324-12353	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448749	Streptococcus phage Javan39, complete genome	13717-13746	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MH853355	Streptococcus phage LF1, complete genome	2521-2550	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MH853356	Streptococcus phage LF2, partial genome	4269-4298	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448837	Streptococcus phage Javan10, complete genome	10182-10211	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MH853358	Streptococcus phage LF4, complete genome	2521-2550	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448833	Streptococcus phage Javan87, complete genome	12324-12353	0	1.0
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK448851	Streptococcus phage Javan14, complete genome	15268-15297	2	0.933
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	MK448933	Streptococcus phage Javan420, complete genome	8535-8564	3	0.9
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP011513	Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence	8259-8288	6	0.8
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MT119359	Enterococcus phage heks, complete genome	1393-1422	6	0.8
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NC_042023	Enterococcus phage phiSHEF5, complete genome	3597-3626	6	0.8
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	NC_047897	Lactobacillus phage Lenus, complete genome	65427-65456	6	0.8
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	AP013698	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, * SEQUENCING IN PROGRESS *	17874-17903	6	0.8
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MH355583	Enterococcus phage vB_EfaS_LM99, complete genome	36513-36542	7	0.767
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	FN667788	Campylobacter phage CP220, complete genome	109857-109886	7	0.767
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	NC_047925	Lactobacillus phage Nyseid, complete genome	67879-67908	7	0.767
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	KU052488	Lactobacillus phage SA-C12, complete genome	24549-24578	7	0.767
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	MN693473	Marine virus AFVG_25M504, complete genome	22237-22266	7	0.767
NZ_LT545678_1	1.1\|971276\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971276-971305	30	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	2210393-2210422	8	0.733
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	MH552499	Podoviridae sp. isolate ctcf755, complete genome	23662-23691	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MF399199	Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence	123542-123571	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK531540	Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence	51674-51703	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP031977	Acinetobacter haemolyticus strain AN43 plasmid pAhaemAN43b, complete sequence	81970-81999	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP031992	Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence	69040-69069	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	CP033558	Acinetobacter nosocomialis strain 2012C01-137 plasmid p2012C01-137-1, complete sequence	75886-75915	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP031973	Acinetobacter haemolyticus strain AN59 plasmid pAhaemAN59c, complete sequence	80685-80714	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP032003	Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616f, complete sequence	85110-85139	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	CP033547	Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-2, complete sequence	12625-12654	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP028560	Acinetobacter sp. WCHA45 plasmid pNDM1_010045, complete sequence	188581-188610	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	CP033537	Acinetobacter pittii strain 2012N21-164 plasmid p2012N21-164-2, complete sequence	4391-4420	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	MK531536	Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence	79280-79309	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP026086	Acinetobacter pittii strain WCHAP005069 plasmid pOXA58_005069, complete sequence	100023-100052	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP029611	Acinetobacter pittii strain ST220 plasmid unnamed, complete sequence	26792-26821	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP028573	Acinetobacter pittii strain WCHAP005046 plasmid pOXA58_005046, complete sequence	60165-60194	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP021429	Acinetobacter pittii strain HUMV-6483 plasmid p11, complete sequence	94244-94273	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP027249	Acinetobacter pittii strain WCHAP100004 plasmid pOXA58_100004, complete sequence	104005-104034	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP027253	Acinetobacter pittii strain WCHAP100020 plasmid pOXA58_100020, complete sequence	22432-22461	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	CP040054	Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence	102381-102410	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP050433	Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence	65340-65369	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP040913	Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence	72019-72048	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP014652	Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence	48063-48092	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP014652	Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence	125006-125035	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP026415	Acinetobacter sp. ACNIH2 plasmid pACI-55cf, complete sequence	39087-39116	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_KU744946	Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence	117029-117058	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_AP018825	Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence	2585-2614	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP031980	Acinetobacter haemolyticus strain AN4 plasmid pAhaemAN4d, complete sequence	106254-106283	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	CP033526	Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-1, complete sequence	12259-12288	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_MK323043	Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence	132961-132990	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP018872	Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence	55390-55419	8	0.733
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	57968-57997	8	0.733
NZ_LT545678_1	1.5\|971540\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971540-971569	30	AP018932	Escherichia phage KIT03 DNA, complete sequence	154828-154857	8	0.733
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	JQ309827	Enterococcus phage vB_Efae230P-4, complete genome	13078-13107	9	0.7
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	NC_028693	Enterococcus phage vB_EfaP_IME195, complete genome	5679-5708	9	0.7
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	NC_049939	Enterococcus phage vB_EfaP_Ef7.3, complete genome	5451-5480	9	0.7
NZ_LT545678_1	1.2\|971342\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971342-971371	30	MK721183	Enterococcus phage vB_EfaP_Ef7.2, complete genome	5456-5485	9	0.7
NZ_LT545678_1	1.3\|971408\|30\|NZ_LT545678\|PILER-CR,CRISPRCasFinder,CRT	971408-971437	30	NC_014754	Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence	20347-20376	9	0.7

1. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to JX409895 (Streptococcus phage JX01, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

2. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

3. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448973 (Streptococcus phage Javan522, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

4. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448955 (Streptococcus phage Javan478, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

5. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448953 (Streptococcus phage Javan474, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

6. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448859 (Streptococcus phage Javan170, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

7. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448778 (Streptococcus phage Javan493, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

8. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448850 (Streptococcus phage Javan132, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

9. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448676 (Streptococcus phage Javan131, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

10. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448975 (Streptococcus phage Javan526, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

11. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448688 (Streptococcus phage Javan161, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

12. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448782 (Streptococcus phage Javan501, complete genome) position: , mismatch: 0, identity: 1.0

atggcaatacaatccttatcgaggttccag	CRISPR spacer
atggcaatacaatccttatcgaggttccag	Protospacer
******************************

13. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
tacgaaaaggttgtgataaaagccatatca	Protospacer
******************************

14. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448971 (Streptococcus phage Javan52, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

15. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448829 (Streptococcus phage Javan7, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

16. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448956 (Streptococcus phage Javan48, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

17. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK449010 (Streptococcus phage Javan90, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

18. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448749 (Streptococcus phage Javan39, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

19. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH853355 (Streptococcus phage LF1, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

20. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH853356 (Streptococcus phage LF2, partial genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

21. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448837 (Streptococcus phage Javan10, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

22. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH853358 (Streptococcus phage LF4, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

23. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448833 (Streptococcus phage Javan87, complete genome) position: , mismatch: 0, identity: 1.0

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagacttaataaagaatttgacaatgatc	Protospacer
******************************

24. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448851 (Streptococcus phage Javan14, complete genome) position: , mismatch: 2, identity: 0.933

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
aaagactcaataaagaatttgacaacgatc	Protospacer
*******.*****************.****

25. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK448933 (Streptococcus phage Javan420, complete genome) position: , mismatch: 3, identity: 0.9

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
ttcgcaaaggttgtgataaaagccatatta	Protospacer
* ** ***********************.*

26. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011513 (Paenibacillus peoriae strain HS311 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
atattcttaataaagaatttgaccataatg	Protospacer
* *  ****************** **.**

27. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MT119359 (Enterococcus phage heks, complete genome) position: , mismatch: 6, identity: 0.8

aaagacttaataaagaatttgacaatgatc--	CRISPR spacer
atagactttataaagaacttgacaa--attag	Protospacer
* ****** ********.*******  **.

28. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_042023 (Enterococcus phage phiSHEF5, complete genome) position: , mismatch: 6, identity: 0.8

aaagacttaataaagaatttgacaatgatc--	CRISPR spacer
atagactttataaagaacttgacaa--attag	Protospacer
* ****** ********.*******  **.

29. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 6, identity: 0.8

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggatggtactgttactaatccatcagcatt	Protospacer
 *.* .***  *******************

30. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to AP013698 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C55A-MedDCM-OCT-S36-C68, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

-tggttatacatttactaatccatcagcatt	CRISPR spacer
ctcagta-acagttactaatacatcagcatt	Protospacer
 * . ** *** ******** **********

31. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH355583 (Enterococcus phage vB_EfaS_LM99, complete genome) position: , mismatch: 7, identity: 0.767

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
atagactttataaagaacttgacaaagcag	Protospacer
* ****** ********.******* *

32. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to FN667788 (Campylobacter phage CP220, complete genome) position: , mismatch: 7, identity: 0.767

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
taccatttaatacagattttgacaatgatt	Protospacer
 *  *.****** *** ************.

33. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_047925 (Lactobacillus phage Nyseid, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggacggtactgttactaatccatcagcatt	Protospacer
 *.. .***  *******************

34. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to KU052488 (Lactobacillus phage SA-C12, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
ggacggtactgttactaatccatcagcatt	Protospacer
 *.. .***  *******************

35. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MN693473 (Marine virus AFVG_25M504, complete genome) position: , mismatch: 7, identity: 0.767

tggttatacatttactaatccatcagcatt	CRISPR spacer
tggtgatacatttactaatcctatgccatc	Protospacer
**** ****************  .. ***.

36. spacer 1.1|971276|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 8, identity: 0.733

atggcaatacaatccttatcgaggttccag	CRISPR spacer
ccggcaatacaatccttgtcgagatcctgc	Protospacer
 .***************.*****.*.*..

37. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MH552499 (Podoviridae sp. isolate ctcf755, complete genome) position: , mismatch: 8, identity: 0.733

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
atttgatagtttgtaataaaagccatatca	Protospacer
  . .* ** ****.***************

38. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MF399199 (Acinetobacter baumannii strain D46 plasmid pD46-4, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

39. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK531540 (Acinetobacter baumannii strain MC75 plasmid pMC75.1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

40. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031977 (Acinetobacter haemolyticus strain AN43 plasmid pAhaemAN43b, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

41. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031992 (Acinetobacter haemolyticus strain 2126ch plasmid pAhaem2126chf, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

42. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to CP033558 (Acinetobacter nosocomialis strain 2012C01-137 plasmid p2012C01-137-1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

43. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031973 (Acinetobacter haemolyticus strain AN59 plasmid pAhaemAN59c, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

44. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032003 (Acinetobacter haemolyticus strain 11616 plasmid pAhaem11616f, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

45. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to CP033547 (Acinetobacter nosocomialis strain 2014N23-120 plasmid p2014N23-120-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

46. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028560 (Acinetobacter sp. WCHA45 plasmid pNDM1_010045, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

47. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to CP033537 (Acinetobacter pittii strain 2012N21-164 plasmid p2012N21-164-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

48. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK531536 (Acinetobacter baumannii strain MC1 plasmid pMC1.1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

49. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026086 (Acinetobacter pittii strain WCHAP005069 plasmid pOXA58_005069, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

50. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP029611 (Acinetobacter pittii strain ST220 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

51. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028573 (Acinetobacter pittii strain WCHAP005046 plasmid pOXA58_005046, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

52. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021429 (Acinetobacter pittii strain HUMV-6483 plasmid p11, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

53. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027249 (Acinetobacter pittii strain WCHAP100004 plasmid pOXA58_100004, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

54. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027253 (Acinetobacter pittii strain WCHAP100020 plasmid pOXA58_100020, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

55. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to CP040054 (Acinetobacter baumannii strain VB35179 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

56. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050433 (Acinetobacter baumannii strain PM194229 plasmid pPM194229_1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

57. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040913 (Acinetobacter pittii strain AB17H194 plasmid pAB17H194-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

58. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

59. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014652 (Acinetobacter sp. DUT-2 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

60. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026415 (Acinetobacter sp. ACNIH2 plasmid pACI-55cf, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

61. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KU744946 (Acinetobacter baumannii strain A297 (RUH875) plasmid pA297-3 clone Global clone 1 (GC1), complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

62. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018825 (Acinetobacter ursingii strain M3 plasmid pAURM-1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

63. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031980 (Acinetobacter haemolyticus strain AN4 plasmid pAhaemAN4d, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

64. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to CP033526 (Acinetobacter pittii strain 2014N05-125 plasmid p2014N05-125-1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

65. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MK323043 (Acinetobacter baumannii strain Acb-45063 plasmid pAb45063_b, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

66. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018872 (Acinetobacter haemolyticus strain TJS01 plasmid pAHTJS1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcgcttgataaagaatttgacaatgtgc	Protospacer
    .***.******************  *

67. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 8, identity: 0.733

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tagagtttaataaaaaatttgacaaagatg	Protospacer
 *....********.********** ***

68. spacer 1.5|971540|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to AP018932 (Escherichia phage KIT03 DNA, complete sequence) position: , mismatch: 8, identity: 0.733

tggttatacatttactaatccatcagcatt	CRISPR spacer
gggtaatacatttactaatccaagcgaagg	Protospacer
 *** *****************   * *

69. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to JQ309827 (Enterococcus phage vB_Efae230P-4, complete genome) position: , mismatch: 9, identity: 0.7

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
atttaaaaggttgtgttaaacgccataaag	Protospacer
  . *********** **** ******  .

70. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_028693 (Enterococcus phage vB_EfaP_IME195, complete genome) position: , mismatch: 9, identity: 0.7

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
atttaaaaggttgtgttaaacgccataaag	Protospacer
  . *********** **** ******  .

71. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_049939 (Enterococcus phage vB_EfaP_Ef7.3, complete genome) position: , mismatch: 9, identity: 0.7

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
atttaaaaggttgtgttaaacgccataaag	Protospacer
  . *********** **** ******  .

72. spacer 1.2|971342|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to MK721183 (Enterococcus phage vB_EfaP_Ef7.2, complete genome) position: , mismatch: 9, identity: 0.7

tacgaaaaggttgtgataaaagccatatca	CRISPR spacer
atttaaaaggttgtgttaaacgccataaag	Protospacer
  . *********** **** ******  .

73. spacer 1.3|971408|30|NZ_LT545678|PILER-CR,CRISPRCasFinder,CRT matches to NC_014754 (Sulfuricurvum kujiense DSM 16994 plasmid pSULKU01, complete sequence) position: , mismatch: 9, identity: 0.7

aaagacttaataaagaatttgacaatgatc	CRISPR spacer
tttcacttaataaagaatttaacaaaaaat	Protospacer
    ****************.**** .* .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

42214 : 50421

Synechococcus_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000220676.1\|42214_43669_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	3.7e-54	32.7
WP_001293628.1\|43696_44722_+	phosphoribosylformylglycinamidine cyclo-ligase	R9TMC7	Synechococcus_phage	8.1e-64	42.7
WP_000717515.1\|44984_45536_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	4.7e-26	35.8
WP_000780014.1\|45558_46311_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000166562.1\|46330_47878_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	1.1e-77	49.8
WP_001045909.1\|48070_48970_+	peptidoglycan DD-metalloendopeptidase family protein	A0A221J6U0	Arthrobacter_phage	4.1e-19	45.9
WP_000783412.1\|49116_50421_+	LysM peptidoglycan-binding domain-containing protein	A0A2D1GNZ3	Streptomyces_phage	3.7e-05	40.5

DBSCAN-SWA_2

197766 : 248266

Streptococcus_phage(44.44%)

protease,transposase,holin,integrase,tRNA

attL 242122:242138|attR 250335:250351

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000468685.1\|197766_199227_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_079859967.1\|200089_201181_+	type II secretion system F family protein	NA	NA	NA	NA
WP_000793380.1\|201177_201507_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA
WP_000244259.1\|201481_201895_+	type II secretion system protein	NA	NA	NA	NA
WP_001872488.1\|201866_202166_+	hypothetical protein	NA	NA	NA	NA
WP_001874060.1\|202119_202581_+	competence protein ComGF	NA	NA	NA	NA
WP_000601101.1\|202558_202930_+	hypothetical protein	NA	NA	NA	NA
WP_001008569.1\|203044_204019_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000047534.1\|204050_205244_+	acetate kinase	NA	NA	NA	NA
WP_069989896.1\|205557_205830_+	hypothetical protein	NA	NA	NA	NA
WP_000191687.1\|205853_207029_-\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA
WP_000008108.1\|207197_207863_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_001872483.1\|207883_208654_-	pyrroline-5-carboxylate reductase	A0A1X9I6T5	Streptococcus_phage	1.3e-29	34.6
WP_001281321.1\|208723_209791_-	glutamyl aminopeptidase	NA	NA	NA	NA
WP_025194279.1\|209970_210174_-	hypothetical protein	NA	NA	NA	NA
WP_000791272.1\|210371_210656_+	DUF4651 domain-containing protein	NA	NA	NA	NA
WP_000602783.1\|210652_210976_+	thioredoxin family protein	NA	NA	NA	NA
WP_000578330.1\|211008_211635_+\|tRNA	DUF4479 and tRNA-binding domain-containing protein	NA	NA	NA	NA
WP_000186179.1\|211688_212405_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000282449.1\|212485_212881_+	single-stranded DNA-binding protein	A1EAD1	Streptococcus_phage	3.3e-29	49.2
WP_000416617.1\|213004_213649_+	HAD family hydrolase	A0A1D8KNV9	Synechococcus_phage	1.0e-11	29.2
WP_000930335.1\|213675_215421_+	histidine kinase	Q9EYF3	Enterobacteria_phage	1.7e-58	29.2
WP_000697628.1\|215401_216142_+	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_000683315.1\|216311_216767_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_000394889.1\|216768_217497_+\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_000170510.1\|217739_219368_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000680645.1\|219480_220458_+	ABC transporter permease	NA	NA	NA	NA
WP_000603397.1\|220454_221276_+	ABC transporter permease	NA	NA	NA	NA
WP_000140980.1\|221287_222091_+	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	4.2e-07	26.9
WP_000171306.1\|222074_222701_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.3e-16	27.0
WP_000434616.1\|222983_225014_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA
WP_000151020.1\|225235_226861_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_069986654.1\|227076_229113_+	BglG family transcription antiterminator	NA	NA	NA	NA
WP_000944235.1\|229115_229400_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000677351.1\|229412_230768_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_000203493.1\|230770_231628_+	transketolase	NA	NA	NA	NA
WP_001203822.1\|231624_232554_+	transketolase	NA	NA	NA	NA
WP_001203064.1\|232662_233922_+	ferric reductase-like transmembrane domain-containing protein	NA	NA	NA	NA
WP_001018249.1\|234009_234279_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_000043851.1\|234659_236789_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_000204782.1\|236790_237543_+	SseB family protein	NA	NA	NA	NA
WP_000539954.1\|237551_238136_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_000656476.1\|238145_238328_+	lipoprotein	NA	NA	NA	NA
WP_000591129.1\|238324_239668_+\|tRNA	cysteine--tRNA ligase	A0A1V0SAQ2	Catovirus	1.0e-53	31.7
WP_000568031.1\|239660_240047_+	Mini-ribonuclease 3	NA	NA	NA	NA
WP_000178025.1\|240149_240905_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_000716639.1\|240901_241420_+	NYN domain-containing protein	NA	NA	NA	NA
WP_000143139.1\|241512_242373_+	DegV family protein	NA	NA	NA	NA
242122:242138	attL	NA	NA	NA	NA
WP_000793594.1\|242910_243033_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001867156.1\|243254_243701_+	50S ribosomal protein L13	NA	NA	NA	NA
WP_000035940.1\|243721_244114_+	30S ribosomal protein S9	NA	NA	NA	NA
WP_070001258.1\|244258_245413_-\|integrase	site-specific integrase	A0A1S5S7K9	Streptococcus_phage	3.6e-44	32.7
WP_070001260.1\|245467_245986_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_001287945.1\|246132_246417_+	hypothetical protein	NA	NA	NA	NA
WP_037618259.1\|246962_247250_+	DnaD domain protein	NA	NA	NA	NA
WP_024379177.1\|247264_247555_+	hypothetical protein	NA	NA	NA	NA
WP_018378866.1\|247547_247910_+	hypothetical protein	NA	NA	NA	NA
WP_070001262.1\|247909_248266_+\|transposase	transposase	NA	NA	NA	NA
250335:250351	attR	NA	NA	NA	NA

DBSCAN-SWA_3

525738 : 582690

Streptococcus_phage(70.83%)

protease,terminase,capsid,transposase,holin,integrase,tail

attL 543947:544006|attR 579863:579943

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070001244.1\|525738_528000_-\|protease	ATP-dependent Clp protease ATP-binding subunit	A0A2C9CYX3	Yersinia_phage	5.7e-126	39.4
WP_000443582.1\|528297_528528_+	DUF1797 family protein	NA	NA	NA	NA
WP_070005714.1\|529076_530354_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_001011647.1\|530525_531218_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_000230129.1\|531210_531945_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-35	41.8
WP_001106848.1\|532231_533926_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	2.9e-127	43.1
WP_070001315.1\|534064_534919_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	2.6e-39	40.2
WP_000634982.1\|534915_535752_+	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA
WP_001286946.1\|535877_537218_+	exodeoxyribonuclease VII large subunit	L7RDW5	Acanthamoeba_polyphaga_moumouvirus	2.0e-38	32.0
WP_001280898.1\|537195_537411_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_000256280.1\|537410_538283_+	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_001041038.1\|538275_539103_+	TlyA family RNA methyltransferase	NA	NA	NA	NA
WP_000747940.1\|539089_539563_+	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_000923611.1\|539574_541233_+	DNA repair protein RecN	NA	NA	NA	NA
WP_000034836.1\|541345_542182_+	DegV family protein	NA	NA	NA	NA
WP_001035227.1\|542174_543014_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA
WP_000806954.1\|542988_543591_+	YpmS family protein	NA	NA	NA	NA
WP_001284634.1\|543693_543969_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	1.2e-25	71.9
543947:544006	attL	NA	NA	NA	NA
WP_017646861.1\|544056_545199_-\|integrase	site-specific integrase	A1EAB7	Streptococcus_phage	4.3e-183	82.6
WP_000442169.1\|545326_545536_-	TM2 domain-containing protein	A0A060AN66	Enterococcus_phage	3.5e-06	47.7
WP_070005686.1\|545760_546492_-	helix-turn-helix domain-containing protein	J7KJ52	Streptococcus_phage	4.6e-85	65.1
WP_000658998.1\|546668_546872_+	hypothetical protein	NA	NA	NA	NA
WP_000359716.1\|546855_547215_-	hypothetical protein	NA	NA	NA	NA
WP_001198775.1\|547287_547506_+	helix-turn-helix transcriptional regulator	A0A141E0W0	Streptococcus_phage	2.4e-26	85.5
WP_000158652.1\|547517_547850_+	hypothetical protein	J7KBZ0	Streptococcus_phage	8.4e-55	100.0
WP_000360288.1\|547954_548290_-	hypothetical protein	J7KDN7	Streptococcus_phage	7.8e-16	69.1
WP_000263692.1\|548435_548621_+	helix-turn-helix transcriptional regulator	J7KH19	Streptococcus_phage	4.1e-27	100.0
WP_001123481.1\|548699_549011_+	hypothetical protein	M1Q0Y6	Streptococcus_phage	3.4e-50	88.2
WP_000732607.1\|549015_549165_+	hypothetical protein	NA	NA	NA	NA
WP_001058282.1\|549240_549441_+	hypothetical protein	J7KK69	Streptococcus_phage	9.3e-33	100.0
WP_000650504.1\|549437_549728_+	hypothetical protein	J7KDN2	Streptococcus_phage	8.2e-38	100.0
WP_000704951.1\|549714_550398_+	AAA family ATPase	J7KC09	Streptococcus_phage	4.6e-124	98.2
WP_079454385.1\|550433_551837_+	DEAD/DEAH box helicase	A0A1P8BMH7	Lactococcus_phage	2.1e-195	72.5
WP_000896928.1\|551841_552324_+	DUF669 domain-containing protein	A0A1P8BMD4	Lactococcus_phage	1.1e-60	71.3
WP_070001311.1\|552341_553895_+	phage resistance protein	A0A1P8BM51	Lactococcus_phage	2.7e-212	71.0
WP_070001310.1\|554160_555033_+	bifunctional DNA primase/polymerase	A0A1P8BM70	Lactococcus_phage	8.9e-104	65.7
WP_001076209.1\|554986_555334_+	VRR-NUC domain-containing protein	J7KC03	Streptococcus_phage	1.3e-45	89.3
WP_070001309.1\|555412_555709_+	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	7.1e-37	80.6
WP_017647865.1\|555692_555851_+	hypothetical protein	J7KJ16	Streptococcus_phage	9.9e-22	96.2
WP_069986686.1\|555847_556213_+	hypothetical protein	X2KPG8	Streptococcus_phage	2.5e-23	47.2
WP_070001308.1\|556486_556921_+	ArpU family transcriptional regulator	J7KDQ1	Streptococcus_phage	1.9e-70	94.4
WP_069986158.1\|557550_557928_+	HNH endonuclease	Q7Y4J1	Streptococcus_phage	4.2e-42	72.2
WP_171898152.1\|558430_558844_+	hypothetical protein	M1PFL4	Streptococcus_phage	2.8e-39	64.3
WP_171898153.1\|559166_559391_+	hypothetical protein	A0A1X9I693	Streptococcus_phage	3.6e-25	84.6
WP_171898154.1\|559440_559629_+	hypothetical protein	A0A141E171	Streptococcus_phage	1.9e-19	82.7
WP_000421991.1\|560897_561086_+	hypothetical protein	NA	NA	NA	NA
WP_000256854.1\|561193_562609_+\|terminase	terminase	A0A0B5A091	Streptococcus_phage	1.4e-215	74.8
WP_001288696.1\|562689_563154_+	DUF4355 domain-containing protein	A0A0B5A7G6	Streptococcus_phage	9.7e-41	51.9
WP_000841024.1\|563156_564059_+\|capsid	phage major capsid protein	A0A0B5A5W3	Streptococcus_phage	1.3e-145	85.7
WP_000640308.1\|564055_564271_+	hypothetical protein	M1PRX2	Streptococcus_phage	3.2e-07	49.3
WP_000180799.1\|564284_564716_+	hypothetical protein	A0A0B5A2F6	Streptococcus_phage	1.1e-46	69.3
WP_001096306.1\|564666_565005_+	hypothetical protein	A0A0B5A086	Streptococcus_phage	4.6e-40	66.1
WP_000032787.1\|564997_565234_+	hypothetical protein	A0A1P8BMT2	Lactococcus_phage	2.5e-21	66.7
WP_000573598.1\|565234_565570_+	hypothetical protein	A0A1P8BMR5	Lactococcus_phage	9.8e-35	64.9
WP_070005687.1\|570290_574103_+\|tail	phage tail protein	J7KBT9	Streptococcus_phage	0.0e+00	88.0
WP_070001270.1\|574103_576095_+	hypothetical protein	J7KC14	Streptococcus_phage	2.3e-296	77.6
WP_079859674.1\|576082_576499_+	DUF1366 domain-containing protein	J7KDI9	Streptococcus_phage	3.2e-11	41.5
WP_001018078.1\|576658_576961_+	hypothetical protein	J7KH30	Streptococcus_phage	1.9e-29	68.8
WP_000609114.1\|576953_577181_+\|holin	phage holin	A7J2B3	Streptococcus_phage	8.4e-30	96.0
WP_069987850.1\|577308_578652_+	lysin	Q5MY96	Streptococcus_phage	9.8e-251	93.3
WP_000356856.1\|578908_579079_-	hypothetical protein	A0A286QNA2	Streptococcus_phage	1.1e-07	63.8
WP_069986155.1\|579496_579676_+	Paratox	J7KBZ4	Streptococcus_phage	2.1e-20	83.1
WP_001290370.1\|580081_580279_+	hypothetical protein	NA	NA	NA	NA
579863:579943	attR	NA	NA	NA	NA
WP_167513700.1\|580359_581704_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.1e-63	49.6
WP_000254068.1\|581757_582690_-	dihydroorotate oxidase	A0A1V0SH91	Hokovirus	1.9e-64	43.4

DBSCAN-SWA_4

599269 : 688021

100

Streptococcus_phage(72.06%)

terminase,capsid,transposase,holin,integrase,tRNA,tail

attL 623286:623303|attR 661748:661765

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000468687.1\|599269_600718_-\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_001022575.1\|600862_601573_-	thioesterase	NA	NA	NA	NA
WP_001115859.1\|601569_602268_-	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	1.5e-82	64.9
WP_000048144.1\|602435_603200_+	(S)-acetoin forming diacetyl reductase	V5L4T3	Hirudovirus	9.8e-06	31.8
WP_000458613.1\|603307_605815_+	bifunctional DnaQ family exonuclease/ATP-dependent helicase	A0A1X9I5C8	Streptococcus_phage	4.1e-218	50.4
WP_000221826.1\|605900_607094_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_000038470.1\|607114_608461_+\|tRNA	asparagine--tRNA ligase	A0A2P1EMB4	Moumouvirus	1.3e-56	31.4
WP_000167491.1\|608500_609058_-	ECF transporter S component	NA	NA	NA	NA
WP_069986676.1\|609054_610038_-	nucleoside hydrolase	NA	NA	NA	NA
WP_000965180.1\|610283_610697_-	OsmC family protein	NA	NA	NA	NA
WP_001278848.1\|610850_611741_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	5.7e-05	28.1
WP_001231102.1\|611737_612712_+	YvcK family protein	A1IMD5	Streptococcus_phage	9.8e-144	78.8
WP_000011316.1\|612708_613620_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	1.4e-107	65.7
WP_000752459.1\|613634_615032_+	C69 family dipeptidase	NA	NA	NA	NA
WP_001227406.1\|615173_616694_+	zinc ABC transporter substrate-binding protein AdcA	NA	NA	NA	NA
WP_000710757.1\|616806_617067_-	type B 50S ribosomal protein L31	NA	NA	NA	NA
WP_000583238.1\|617175_618111_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_000189639.1\|618376_619399_+	adenosine deaminase	NA	NA	NA	NA
WP_001162136.1\|619457_619901_+	flavodoxin	NA	NA	NA	NA
WP_000418127.1\|619977_620253_+	chorismate mutase	NA	NA	NA	NA
WP_069986161.1\|620245_621442_+	voltage-gated chloride channel family protein	A0A1X9I5Z9	Streptococcus_phage	7.9e-103	54.5
WP_070001343.1\|621644_622118_+\|transposase	IS200/IS605 family transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	2.2e-11	34.2
WP_001068667.1\|622772_623120_+	50S ribosomal protein L19	NA	NA	NA	NA
623286:623303	attL	NA	NA	NA	NA
WP_000264734.1\|623344_624424_-\|integrase	site-specific integrase	A0A1X9IGD8	Lactococcus_phage	3.2e-63	40.4
WP_000505363.1\|624546_624750_-	hypothetical protein	O34033	Streptococcus_phage	1.7e-10	48.4
WP_000891067.1\|624852_625410_-	GTP pyrophosphokinase	Q0H269	Geobacillus_phage	1.6e-18	30.2
WP_069986678.1\|625411_626164_-	helix-turn-helix transcriptional regulator	J7KJ52	Streptococcus_phage	4.4e-75	60.1
WP_000658998.1\|626328_626532_+	hypothetical protein	NA	NA	NA	NA
WP_000359716.1\|626515_626875_-	hypothetical protein	NA	NA	NA	NA
WP_001166512.1\|626947_627136_+	helix-turn-helix transcriptional regulator	A0A0B5A7F0	Streptococcus_phage	1.8e-14	65.0
WP_069986680.1\|627183_627933_+	phage antirepressor KilAC domain-containing protein	F8HGQ0	Streptococcus_phage	1.3e-79	60.4
WP_000158652.1\|627944_628277_+	hypothetical protein	J7KBZ0	Streptococcus_phage	8.4e-55	100.0
WP_000360288.1\|628381_628717_-	hypothetical protein	J7KDN7	Streptococcus_phage	7.8e-16	69.1
WP_000263692.1\|628862_629048_+	helix-turn-helix transcriptional regulator	J7KH19	Streptococcus_phage	4.1e-27	100.0
WP_001123481.1\|629126_629438_+	hypothetical protein	M1Q0Y6	Streptococcus_phage	3.4e-50	88.2
WP_000732607.1\|629442_629592_+	hypothetical protein	NA	NA	NA	NA
WP_001058282.1\|629667_629868_+	hypothetical protein	J7KK69	Streptococcus_phage	9.3e-33	100.0
WP_000650504.1\|629864_630155_+	hypothetical protein	J7KDN2	Streptococcus_phage	8.2e-38	100.0
WP_000704951.1\|630141_630825_+	AAA family ATPase	J7KC09	Streptococcus_phage	4.6e-124	98.2
WP_079454385.1\|630860_632264_+	DEAD/DEAH box helicase	A0A1P8BMH7	Lactococcus_phage	2.1e-195	72.5
WP_000896928.1\|632268_632751_+	DUF669 domain-containing protein	A0A1P8BMD4	Lactococcus_phage	1.1e-60	71.3
WP_070001311.1\|632768_634322_+	phage resistance protein	A0A1P8BM51	Lactococcus_phage	2.7e-212	71.0
WP_070001310.1\|634587_635460_+	bifunctional DNA primase/polymerase	A0A1P8BM70	Lactococcus_phage	8.9e-104	65.7
WP_001076209.1\|635413_635761_+	VRR-NUC domain-containing protein	J7KC03	Streptococcus_phage	1.3e-45	89.3
WP_070001309.1\|635839_636136_+	DUF1599 domain-containing protein	J7KDH9	Streptococcus_phage	7.1e-37	80.6
WP_017647865.1\|636119_636278_+	hypothetical protein	J7KJ16	Streptococcus_phage	9.9e-22	96.2
WP_069986686.1\|636274_636640_+	hypothetical protein	X2KPG8	Streptococcus_phage	2.5e-23	47.2
WP_070001308.1\|636913_637348_+	ArpU family transcriptional regulator	J7KDQ1	Streptococcus_phage	1.9e-70	94.4
WP_000227335.1\|640118_641339_+	hypothetical protein	Q7Y4I9	Streptococcus_phage	7.8e-114	66.7
WP_000421991.1\|641338_641527_+	hypothetical protein	NA	NA	NA	NA
WP_000256854.1\|641634_643050_+\|terminase	terminase	A0A0B5A091	Streptococcus_phage	1.4e-215	74.8
WP_001288696.1\|643130_643595_+	DUF4355 domain-containing protein	A0A0B5A7G6	Streptococcus_phage	9.7e-41	51.9
WP_000841024.1\|643597_644500_+\|capsid	phage major capsid protein	A0A0B5A5W3	Streptococcus_phage	1.3e-145	85.7
WP_000640308.1\|644496_644712_+	hypothetical protein	M1PRX2	Streptococcus_phage	3.2e-07	49.3
WP_000180799.1\|644725_645157_+	hypothetical protein	A0A0B5A2F6	Streptococcus_phage	1.1e-46	69.3
WP_001096306.1\|645107_645446_+	hypothetical protein	A0A0B5A086	Streptococcus_phage	4.6e-40	66.1
WP_000032787.1\|645438_645675_+	hypothetical protein	A0A1P8BMT2	Lactococcus_phage	2.5e-21	66.7
WP_000226353.1\|646019_646577_+\|tail	tail protein	M1PKG8	Streptococcus_phage	3.4e-64	65.8
WP_069986694.1\|646576_646822_+	hypothetical protein	A0A0B5A2F3	Streptococcus_phage	3.3e-16	56.6
WP_070005689.1\|646836_647187_+	DUF5361 domain-containing protein	A0A0B5A083	Streptococcus_phage	7.6e-30	55.2
WP_069986695.1\|647209_649222_+	PblA	Q9F4J3	Streptococcus_phage	9.8e-13	58.9
WP_069986152.1\|649215_650748_+\|tail	phage tail family protein	J7KH53	Streptococcus_phage	9.5e-202	74.0
WP_070005687.1\|650748_654561_+\|tail	phage tail protein	J7KBT9	Streptococcus_phage	0.0e+00	88.0
WP_070001270.1\|654561_656553_+	hypothetical protein	J7KC14	Streptococcus_phage	2.3e-296	77.6
WP_079859674.1\|656540_656957_+	DUF1366 domain-containing protein	J7KDI9	Streptococcus_phage	3.2e-11	41.5
WP_001018078.1\|657116_657419_+	hypothetical protein	J7KH30	Streptococcus_phage	1.9e-29	68.8
WP_000609114.1\|657411_657639_+\|holin	phage holin	A7J2B3	Streptococcus_phage	8.4e-30	96.0
WP_069987850.1\|657766_659110_+	lysin	Q5MY96	Streptococcus_phage	9.8e-251	93.3
WP_000634506.1\|659475_659988_+	hypothetical protein	NA	NA	NA	NA
WP_000455663.1\|660427_660679_-	hypothetical protein	A3F666	Streptococcus_phage	1.1e-41	96.3
WP_171898157.1\|660819_660966_-	hypothetical protein	A3F667	Streptococcus_phage	1.1e-14	85.4
WP_000424774.1\|661115_661325_+	helix-turn-helix transcriptional regulator	A3F668	Streptococcus_phage	8.8e-26	84.1
WP_000965647.1\|661447_661627_+	hypothetical protein	J7KBZ4	Streptococcus_phage	4.0e-19	81.0
WP_001872365.1\|662342_662609_-	hypothetical protein	Q77YW7	Streptococcus_phage	9.2e-20	65.2
661748:661765	attR	NA	NA	NA	NA
WP_000640621.1\|662608_663112_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	7.3e-26	43.2
WP_001122304.1\|663174_663375_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_001865698.1\|663396_663657_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	3.4e-11	43.0
WP_001867107.1\|663782_663992_+\|transposase	transposase	A0A0C5AEA5	Paenibacillus_phage	1.4e-15	55.4
WP_000508795.1\|664164_664326_-	NINE protein	NA	NA	NA	NA
WP_000222594.1\|664533_665478_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.7e-20	33.3
WP_001891778.1\|666225_667395_+	ABC transporter permease	NA	NA	NA	NA
WP_000353149.1\|667404_668061_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.2e-22	31.8
WP_000594351.1\|668060_669437_+	FtsX-like permease family protein	NA	NA	NA	NA
WP_000699093.1\|669533_670187_+	response regulator transcription factor	W8CYM9	Bacillus_phage	8.1e-25	33.6
WP_000734168.1\|670183_671485_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.7e-05	25.7
WP_000076709.1\|672361_672541_+	CsbD family protein	J7KJ36	Streptococcus_phage	4.3e-21	96.4
WP_000027835.1\|672582_672771_+	hypothetical protein	J7KIW4	Streptococcus_phage	3.3e-16	78.2
WP_000078931.1\|673195_674401_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_001106189.1\|674519_675080_+	HAD-IA family hydrolase	NA	NA	NA	NA
WP_000134199.1\|675080_677033_+	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	7.5e-143	44.7
WP_000094341.1\|677126_678851_+	septation ring formation regulator EzrA	NA	NA	NA	NA
WP_000589685.1\|678944_679586_+	phosphoserine phosphatase SerB	NA	NA	NA	NA
WP_000409124.1\|679606_680092_-	NUDIX domain-containing protein	NA	NA	NA	NA
WP_000137373.1\|680104_680560_-	YueI family protein	W6LLD2	Streptococcus_phage	7.8e-27	48.9
WP_000022832.1\|680757_682065_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.5e-235	95.4
WP_000823931.1\|682172_683237_-	DNA/RNA non-specific endonuclease	NA	NA	NA	NA
WP_017650284.1\|683465_684749_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_001127193.1\|684741_685254_+	shikimate kinase	NA	NA	NA	NA
WP_000089330.1\|685313_686687_+	LCP family protein	NA	NA	NA	NA
WP_000191687.1\|686845_688021_+\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA

DBSCAN-SWA_5

794124 : 800177

Staphylococcus_phage(50.0%)

transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_017650270.1\|794124_795234_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	2.6e-55	36.9
WP_069993499.1\|795214_795832_+	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	4.9e-32	36.9
WP_000222594.1\|795764_796709_-\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.7e-20	33.3
WP_017650269.1\|796933_798127_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.8e-110	50.8
WP_000152414.1\|798141_798612_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.3e-40	52.7
WP_017650268.1\|798686_800177_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	1.5e-90	39.4

DBSCAN-SWA_6

885140 : 894866

Streptococcus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000468690.1\|885140_886616_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_000628862.1\|886607_887690_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	2.8e-30	30.7
WP_001227823.1\|887834_888464_+	uridine kinase	A0A1V0SAA3	Catovirus	9.2e-34	39.2
WP_001043210.1\|888550_889048_+	GAF domain-containing protein	NA	NA	NA	NA
WP_000283823.1\|889047_890712_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	2.3e-47	42.9
WP_000166926.1\|890800_890995_+	DUF3272 domain-containing protein	NA	NA	NA	NA
WP_069986739.1\|890975_891911_-	bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA	NA	NA	NA
WP_000003964.1\|892095_893292_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.2e-137	64.1
WP_000468672.1\|893417_894866_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8

DBSCAN-SWA_7

931842 : 1013206

Streptococcus_phage(62.86%)

capsid,transposase,holin,integrase,head,tRNA,tail

attL 947180:947197|attR 991906:991923

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000365655.1\|931842_932883_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.3e-29	34.7
WP_069986721.1\|932965_933487_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000961585.1\|933540_935946_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_070001266.1\|936014_936917_-	neutral zinc metallopeptidase	A0A1I9SA48	Rhodococcus_phage	3.5e-34	33.9
WP_000772298.1\|937094_940328_+	ATP-dependent nuclease subunit B	NA	NA	NA	NA
WP_000143233.1\|940317_943941_+	helicase-exonuclease AddAB subunit AddA	A0A068EQC7	Bacillus_phage	3.4e-16	23.2
WP_000634649.1\|943953_944871_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_000028893.1\|944903_946280_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_000584913.1\|946407_948318_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	4.0e-48	27.8
947180:947197	attL	NA	NA	NA	NA
WP_069986184.1\|948467_949436_+	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA
WP_000005088.1\|949510_950509_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_000257565.1\|950635_952024_+	dihydrolipoamide acetyltransferase	NA	NA	NA	NA
WP_070001264.1\|952083_953829_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.1e-33	25.4
WP_017649994.1\|953926_954916_+	lipoate--protein ligase	NA	NA	NA	NA
WP_000222749.1\|955023_955809_-	type 1 glutamine amidotransferase	NA	NA	NA	NA
WP_000700880.1\|955808_957152_-	Mur ligase family protein	NA	NA	NA	NA
WP_000350949.1\|957291_958143_+	TIGR00159 family protein	NA	NA	NA	NA
WP_000713236.1\|958145_959105_+	YbbR-like domain-containing protein	NA	NA	NA	NA
WP_000521427.1\|959158_960511_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_000159234.1\|960633_961005_+	YbgA family protein	NA	NA	NA	NA
WP_001241816.1\|961029_961410_+	hypothetical protein	NA	NA	NA	NA
WP_000914659.1\|961502_962633_+	oxygen-independent coproporphyrinogen III oxidase	NA	NA	NA	NA
WP_000523795.1\|962636_963374_+	acyl-ACP thioesterase	NA	NA	NA	NA
WP_000323544.1\|963374_964145_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_000653355.1\|964134_964791_+	TIGR01906 family membrane protein	NA	NA	NA	NA
WP_001040098.1\|965165_969278_+	type II CRISPR RNA-guided endonuclease Cas9	NA	NA	NA	NA
WP_000929489.1\|969279_970149_+	type II CRISPR-associated endonuclease Cas1	NA	NA	NA	NA
WP_000122194.1\|970145_970487_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA
WP_000590706.1\|970473_971139_+	type II-A CRISPR-associated protein Csn2	NA	NA	NA	NA
WP_000438312.1\|972207_972624_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	1.6e-23	40.4
WP_001019133.1\|972759_974592_+	elongation factor 4	A0A2K9L2P9	Tupanvirus	2.2e-19	41.0
WP_069986186.1\|974838_977472_+	pneumococcal-type histidine triad protein	NA	NA	NA	NA
WP_000191687.1\|977641_978817_-\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA
WP_070001305.1\|978939_979551_+	HD domain-containing protein	S4W232	Pandoravirus	9.9e-09	26.6
WP_000621142.1\|979559_980024_+	GNAT family N-acetyltransferase	G5DEI8	Salmonella_phage	1.8e-07	35.7
WP_000665410.1\|980023_980458_+	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA
WP_069986597.1\|980609_983402_+	cation-transporting P-type ATPase	M1HK51	Paramecium_bursaria_Chlorella_virus	3.9e-76	29.6
WP_000065321.1\|983401_984505_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_000146565.1\|984624_985263_-	CatB-related O-acetyltransferase	A0A2R8FE91	Brazilian_cedratvirus	4.9e-19	43.4
WP_017646500.1\|985592_986681_-\|integrase	site-specific integrase	J7KBT5	Streptococcus_phage	1.9e-204	100.0
WP_017646499.1\|986797_987250_-	hypothetical protein	J7KGT3	Streptococcus_phage	1.4e-81	100.0
WP_070005695.1\|987474_988230_-	helix-turn-helix domain-containing protein	A0A097PBE5	Streptococcus_pyogenes_phage	4.3e-86	64.9
WP_000461335.1\|988547_989732_+\|capsid	phage major capsid protein	J7KJ82	Streptococcus_phage	3.0e-163	76.8
WP_069990145.1\|989876_990179_+\|head,tail	phage head-tail connector protein	J7KC36	Streptococcus_phage	1.1e-45	90.0
WP_000632970.1\|990175_990523_+\|head	phage head closure protein	J7KJ42	Streptococcus_phage	2.7e-56	99.1
WP_000160226.1\|990519_990897_+	HK97 gp10 family phage protein	J7KDM3	Streptococcus_phage	8.7e-64	96.0
WP_069990143.1\|990893_991319_+	hypothetical protein	J7KBZ9	Streptococcus_phage	7.0e-78	97.9
WP_069990141.1\|991334_991928_+\|tail	phage tail protein	J7KKC8	Streptococcus_phage	8.8e-87	84.2
991906:991923	attR	NA	NA	NA	NA
WP_000273027.1\|991979_992300_+	hypothetical protein	J7KK85	Streptococcus_phage	8.4e-44	82.1
WP_069990139.1\|992509_996508_+\|tail	phage tail tape measure protein	J7KDT4	Streptococcus_phage	0.0e+00	82.9
WP_070005696.1\|996504_998028_+\|tail	phage tail family protein	J7KH53	Streptococcus_phage	1.0e-288	96.3
WP_070005697.1\|998018_1001843_+\|tail	phage tail protein	J7KBT9	Streptococcus_phage	0.0e+00	89.4
WP_070001270.1\|1001843_1003835_+	hypothetical protein	J7KC14	Streptococcus_phage	2.3e-296	77.6
WP_079859674.1\|1003822_1004239_+	DUF1366 domain-containing protein	J7KDI9	Streptococcus_phage	3.2e-11	41.5
WP_001018078.1\|1004398_1004701_+	hypothetical protein	J7KH30	Streptococcus_phage	1.9e-29	68.8
WP_000609114.1\|1004693_1004921_+\|holin	phage holin	A7J2B3	Streptococcus_phage	8.4e-30	96.0
WP_069987850.1\|1005048_1006392_+	lysin	Q5MY96	Streptococcus_phage	9.8e-251	93.3
WP_000634506.1\|1006757_1007270_+	hypothetical protein	NA	NA	NA	NA
WP_000455663.1\|1007709_1007961_-	hypothetical protein	A3F666	Streptococcus_phage	1.1e-41	96.3
WP_171898157.1\|1008101_1008248_-	hypothetical protein	A3F667	Streptococcus_phage	1.1e-14	85.4
WP_000424774.1\|1008397_1008607_+	helix-turn-helix transcriptional regulator	A3F668	Streptococcus_phage	8.8e-26	84.1
WP_070005698.1\|1008729_1008918_+	Paratox	J7KIW4	Streptococcus_phage	9.1e-22	82.3
WP_001056394.1\|1009503_1010115_+	TVP38/TMEM64 family protein	M1Q152	Streptococcus_phage	2.7e-54	54.9
WP_000467138.1\|1011713_1012496_-	hypothetical protein	NA	NA	NA	NA
WP_000192685.1\|1012522_1013206_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-19	26.6

DBSCAN-SWA_8

1163825 : 1225862

Streptococcus_phage(88.64%)

protease,terminase,capsid,portal,transposase,holin,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070005700.1\|1163825_1165313_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.4e-202	74.5
WP_000671148.1\|1165358_1166633_-	purine permease	Q9KX94	Enterobacteria_phage	2.5e-30	27.0
WP_000770389.1\|1166632_1167214_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_000481328.1\|1167468_1168452_-	GMP reductase	G3MBI2	Bacillus_virus	8.1e-138	75.1
WP_017650080.1\|1168654_1169995_-	MFS transporter	NA	NA	NA	NA
WP_017650081.1\|1170286_1170958_+	hypothetical protein	NA	NA	NA	NA
WP_001164948.1\|1171029_1173030_-	KUP/HAK/KT family potassium transporter	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	2.5e-69	34.8
WP_000625605.1\|1173164_1173926_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_001257095.1\|1173987_1174980_-	phosphate acetyltransferase	NA	NA	NA	NA
WP_000667471.1\|1175005_1175890_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_000192910.1\|1175886_1176723_-	NAD kinase	NA	NA	NA	NA
WP_000061344.1\|1176697_1177369_-	GTP pyrophosphokinase family protein	NA	NA	NA	NA
WP_000149079.1\|1177478_1178051_+	CYTH domain-containing protein	NA	NA	NA	NA
WP_000840698.1\|1178227_1179202_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	1.6e-37	33.8
WP_017650084.1\|1179205_1180321_+	cysteine desulfurase	A0A1X7C038	Faustovirus	2.4e-29	27.0
WP_000863499.1\|1180322_1180670_+	DUF1831 domain-containing protein	NA	NA	NA	NA
WP_000605175.1\|1180824_1181463_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_000274751.1\|1181475_1182156_-	DNA repair protein RadC	NA	NA	NA	NA
WP_000667246.1\|1182251_1183385_-	AI-2E family transporter	NA	NA	NA	NA
WP_017650085.1\|1183475_1184915_-	6-phospho-beta-glucosidase	NA	NA	NA	NA
WP_000895130.1\|1185074_1185689_-	hypothetical protein	NA	NA	NA	NA
WP_069986481.1\|1185789_1186611_-	HAD family hydrolase	NA	NA	NA	NA
WP_000756017.1\|1186744_1188310_-	recombinase family protein	Q6DMS5	Streptococcus_phage	1.6e-167	58.6
WP_000809548.1\|1188312_1189521_-	recombinase family protein	Q6DMS6	Streptococcus_phage	1.8e-102	50.3
WP_000138926.1\|1189577_1189739_-	hypothetical protein	Q6DMS7	Streptococcus_phage	7.5e-09	62.7
WP_000611948.1\|1189735_1190137_-	hypothetical protein	NA	NA	NA	NA
WP_000515886.1\|1190350_1191820_-	N-acetylmuramoyl-L-alanine amidase	A0A1X9I678	Streptococcus_phage	1.7e-227	79.3
WP_000661353.1\|1191821_1192226_-\|holin	phage holin family protein	D0R0E9	Streptococcus_phage	7.9e-47	76.3
WP_000796407.1\|1192243_1194100_-	hypothetical protein	Q6DMS9	Streptococcus_phage	4.0e-255	72.8
WP_000966171.1\|1194112_1197028_-\|tail	phage tail protein	Q6DMT0	Streptococcus_phage	0.0e+00	65.4
WP_000589861.1\|1197027_1197753_-	hypothetical protein	Q6DMT1	Streptococcus_phage	9.4e-83	57.9
WP_000918334.1\|1197749_1200869_-\|tail	phage tail tape measure protein	Q6DMT2	Streptococcus_phage	2.7e-243	76.4
WP_001249611.1\|1201051_1201471_-	hypothetical protein	A0A1X9I691	Streptococcus_phage	1.3e-55	76.3
WP_000818570.1\|1201482_1202052_-	hypothetical protein	A0A1B0RXE2	Streptococcus_phage	1.3e-98	95.2
WP_001209974.1\|1202054_1202381_-	hypothetical protein	M1Q1Z4	Streptococcus_phage	4.9e-39	70.4
WP_000161245.1\|1202389_1202758_-	HK97 gp10 family phage protein	Q6DMT7	Streptococcus_phage	5.3e-34	62.1
WP_000684956.1\|1202750_1203089_-\|head,tail	head-tail adaptor protein	A0A1B0RXE4	Streptococcus_phage	4.0e-36	68.8
WP_000988606.1\|1203088_1203346_-\|head,tail	phage gp6-like head-tail connector protein	D0R0D7	Streptococcus_phage	7.3e-30	78.8
WP_000040507.1\|1203342_1204551_-\|capsid	phage major capsid protein	E4ZFM5	Streptococcus_phage	3.1e-203	87.8
WP_001248758.1\|1204565_1205264_-\|protease	Clp protease ClpP	A0A1B0RXJ9	Streptococcus_phage	1.3e-100	79.7
WP_000523683.1\|1205208_1206546_-\|portal	phage portal protein	A0A1B0RXD8	Streptococcus_phage	8.8e-228	89.5
WP_000424368.1\|1206626_1206899_-	hypothetical protein	E4ZFM1	Streptococcus_phage	1.8e-07	58.1
WP_070001277.1\|1206917_1207223_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_001140390.1\|1207222_1207525_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_070001275.1\|1207579_1209172_-\|terminase	terminase large subunit	A0A1B0RXJ8	Streptococcus_phage	1.4e-304	95.3
WP_000290860.1\|1209168_1209642_-\|terminase	phage terminase small subunit P27 family	A0A1B0RXG3	Streptococcus_phage	2.9e-85	97.5
WP_000248475.1\|1209689_1209893_-	DUF4314 domain-containing protein	A0A1B0RXD4	Streptococcus_phage	3.3e-17	68.9
WP_000164556.1\|1209892_1210156_-	hypothetical protein	NA	NA	NA	NA
WP_069986205.1\|1210220_1211486_-	DNA (cytosine-5-)-methyltransferase	M1NSK8	Streptococcus_phage	7.6e-229	92.1
WP_069986720.1\|1211482_1212739_-	DNA modification methylase	A0A1B0RXJ0	Streptococcus_phage	6.8e-222	89.9
WP_001889274.1\|1212710_1213166_-	hypothetical protein	A0A1B0RXC6	Streptococcus_phage	4.7e-48	56.2
WP_001138024.1\|1213453_1213819_-	HNH endonuclease	A0A1B0RXJ3	Streptococcus_phage	2.4e-63	89.3
WP_000578147.1\|1213820_1214858_-	methionine adenosyltransferase	E4ZFL0	Streptococcus_phage	3.6e-168	83.8
WP_000166944.1\|1214906_1215089_-	hypothetical protein	A0A1B0RXC3	Streptococcus_phage	3.8e-25	96.7
WP_000356273.1\|1215272_1215749_-	hypothetical protein	A0A1B0RXB9	Streptococcus_phage	1.2e-81	96.8
WP_001176187.1\|1215741_1217118_-	DEAD/DEAH box helicase	M1Q214	Streptococcus_phage	1.1e-249	95.0
WP_025194113.1\|1217098_1217380_-	VRR-NUC domain-containing protein	M1PFY8	Streptococcus_phage	4.6e-38	80.6
WP_001160925.1\|1217660_1219949_-	hypothetical protein	A0A1B0RXC5	Streptococcus_phage	0.0e+00	87.1
WP_000077669.1\|1220306_1220630_+	hypothetical protein	D0R0B4	Streptococcus_phage	3.4e-32	72.0
WP_069990076.1\|1220622_1221744_+	DUF2800 domain-containing protein	M1Q218	Streptococcus_phage	2.1e-198	89.2
WP_000105207.1\|1221748_1222312_+	DUF2815 family protein	A0A1B0RXA9	Streptococcus_phage	1.6e-90	92.3
WP_000158580.1\|1222331_1222499_+	hypothetical protein	E4ZFK2	Streptococcus_phage	1.8e-05	49.0
WP_001121831.1\|1222547_1224503_+	DNA polymerase	E4ZFK1	Streptococcus_phage	0.0e+00	86.0
WP_069987786.1\|1225265_1225862_-	hypothetical protein	M1Q222	Streptococcus_phage	4.9e-13	28.9

DBSCAN-SWA_9

1317150 : 1383527

Staphylococcus_phage(21.43%)

protease,transposase,integrase,tRNA,tail

attL 1364953:1364969|attR 1384252:1384268

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000191687.1\|1317150_1318326_+\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA
WP_001259484.1\|1318479_1319190_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_000863791.1\|1319279_1320068_-	esterase family protein	NA	NA	NA	NA
WP_001280077.1\|1320124_1321786_-	ribonuclease J	NA	NA	NA	NA
WP_000245084.1\|1322082_1322844_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	1.6e-11	29.9
WP_069986587.1\|1322843_1323707_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_000790859.1\|1323719_1324724_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000006733.1\|1325082_1326738_+	fibronectin/fibrinogen-binding protein	A0A1J0F9J4	Only_Syngen_Nebraska_virus	2.3e-07	41.0
WP_000005476.1\|1326791_1327511_-	acetolactate decarboxylase	NA	NA	NA	NA
WP_069986220.1\|1327524_1329207_-	acetolactate synthase AlsS	NA	NA	NA	NA
WP_000934877.1\|1329316_1330543_-	hypothetical protein	NA	NA	NA	NA
WP_017650199.1\|1330532_1331723_-	AI-2E family transporter	NA	NA	NA	NA
WP_000796045.1\|1331814_1332276_-	NUDIX hydrolase	NA	NA	NA	NA
WP_000163512.1\|1332265_1332748_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA
WP_000403405.1\|1332964_1336183_+	polysaccharide lyase 8 family protein	NA	NA	NA	NA
WP_000277597.1\|1336234_1337275_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	1.2e-67	43.6
WP_000459248.1\|1337326_1337839_-	hypothetical protein	NA	NA	NA	NA
WP_000139165.1\|1337838_1338432_-	dTDP-4-dehydrorhamnose 3,5-epimerase family protein	NA	NA	NA	NA
WP_000676112.1\|1338431_1339301_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.7e-100	62.2
WP_000716839.1\|1339359_1340463_-	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_000647414.1\|1340471_1341260_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_000365678.1\|1341249_1341933_-\|tRNA	tRNA (adenine-N(1))-methyltransferase	NA	NA	NA	NA
WP_000221657.1\|1342036_1342717_-	DnaD domain-containing protein	Q938N2	Temperate_phage	1.9e-08	31.8
WP_000365343.1\|1342834_1343353_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	4.6e-31	44.1
WP_001247518.1\|1343475_1346040_-	GBS Bsp-like repeat-containing protein	NA	NA	NA	NA
WP_000622244.1\|1346191_1348390_-	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	7.1e-73	28.9
WP_000124589.1\|1348386_1349148_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000405388.1\|1349149_1350079_-	ribonuclease Z	NA	NA	NA	NA
WP_000568321.1\|1350120_1350768_-	cystathionine beta-lyase	NA	NA	NA	NA
WP_000573351.1\|1350760_1351999_-	GTPase HflX	NA	NA	NA	NA
WP_001226479.1\|1352089_1352980_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_000239229.1\|1353090_1353267_+	DUF3042 family protein	NA	NA	NA	NA
WP_000800361.1\|1353308_1354226_-	TDT family transporter	NA	NA	NA	NA
WP_000823026.1\|1354360_1358119_-	pullulanase	NA	NA	NA	NA
WP_069986588.1\|1358287_1359022_-	hypothetical protein	NA	NA	NA	NA
WP_000130598.1\|1359036_1359621_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA
WP_000150949.1\|1359717_1361124_-	dipeptidase PepV	NA	NA	NA	NA
WP_000670189.1\|1361170_1361773_-	nitroreductase family protein	NA	NA	NA	NA
WP_000942622.1\|1361942_1363724_+	glycerophosphodiester phosphodiesterase	I6XE30	Staphylococcus_phage	9.3e-07	25.0
WP_001003969.1\|1363765_1365547_-	excinuclease ABC subunit UvrC	NA	NA	NA	NA
1364953:1364969	attL	NA	NA	NA	NA
WP_000285037.1\|1366529_1367870_-	MATE family efflux transporter	NA	NA	NA	NA
WP_070001301.1\|1367969_1368386_-	VOC family protein	NA	NA	NA	NA
WP_000582590.1\|1368389_1368887_-\|tail	phage tail protein	NA	NA	NA	NA
WP_000162272.1\|1369108_1369705_+	Ltp family lipoprotein	NA	NA	NA	NA
WP_001873128.1\|1371023_1371425_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	4.2e-08	32.3
WP_003050426.1\|1371711_1372911_-\|integrase	tyrosine-type recombinase/integrase	U3PJ31	Staphylococcus_phage	2.5e-08	22.4
WP_037585109.1\|1372913_1373162_-	DUF3173 family protein	NA	NA	NA	NA
WP_000284843.1\|1373431_1373656_-	helix-turn-helix transcriptional regulator	A0A139ZPJ2	Marinitoga_camini_virus	5.4e-05	37.3
WP_000568303.1\|1373934_1374672_-	ABC transporter permease	NA	NA	NA	NA
WP_000191687.1\|1374861_1376037_+\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA
WP_003050416.1\|1376750_1377659_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.9e-40	45.9
WP_000691663.1\|1377765_1379838_-	ATP-binding cassette domain-containing protein	A0A1V0SE00	Indivirus	4.0e-17	29.8
WP_000222594.1\|1382582_1383527_+\|transposase	IS30 family transposase	H7BUM7	unidentified_phage	8.7e-20	33.3
1384252:1384268	attR	NA	NA	NA	NA

DBSCAN-SWA_10

1598815 : 1646563

Streptococcus_phage(22.22%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_145923300.1\|1598815_1599960_-\|transposase	IS3 family transposase	Q8W6R2	Burkholderia_virus	1.4e-16	26.4
WP_069986245.1\|1600222_1600417_-	glycosyl transferase family 8	NA	NA	NA	NA
WP_069986246.1\|1600413_1601619_-	glycosyltransferase	NA	NA	NA	NA
WP_069986247.1\|1601627_1602635_-	sugar transferase	NA	NA	NA	NA
WP_070005707.1\|1602966_1605597_-	accessory Sec-dependent serine-rich glycoprotein adhesin	NA	NA	NA	NA
WP_070005708.1\|1605997_1607173_+\|transposase	IS256-like element ISSag11 family transposase	NA	NA	NA	NA
WP_070001334.1\|1607306_1608779_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_069986250.1\|1608876_1610868_-	excinuclease ABC subunit B	NA	NA	NA	NA
WP_001891501.1\|1610928_1611726_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000681007.1\|1612030_1614214_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_000818887.1\|1614213_1614954_+	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.2e-36	43.3
WP_070005715.1\|1615503_1616781_+	group II intron reverse transcriptase/maturase	NA	NA	NA	NA
WP_001872136.1\|1616960_1617311_+	hypothetical protein	NA	NA	NA	NA
WP_070005709.1\|1617395_1618853_-\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_000502594.1\|1618967_1619126_-	hypothetical protein	NA	NA	NA	NA
WP_000061658.1\|1619151_1620465_-	GTPase ObgE	NA	NA	NA	NA
WP_000863865.1\|1620525_1620654_-	DUF4044 domain-containing protein	NA	NA	NA	NA
WP_000244049.1\|1620831_1622073_+	aminopeptidase	NA	NA	NA	NA
WP_000865328.1\|1622106_1622685_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_000824626.1\|1622778_1624833_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_001234925.1\|1624917_1625640_-	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_000468683.1\|1625920_1627399_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_000451355.1\|1627390_1628233_-	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	3.1e-45	37.2
WP_069986252.1\|1628499_1629174_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_001116200.1\|1629261_1629654_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_069986253.1\|1629782_1630709_+	glycosyltransferase family 2 protein	V5USA4	Oenococcus_phage	5.8e-85	52.1
WP_000042126.1\|1630837_1632226_+	amino acid permease	NA	NA	NA	NA
WP_000238456.1\|1633869_1634337_-	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	2.6e-41	56.1
WP_000282513.1\|1636858_1637095_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_001873241.1\|1637141_1637288_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_017650256.1\|1637284_1638454_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_017650257.1\|1638649_1640296_-	hypothetical protein	NA	NA	NA	NA
WP_000424347.1\|1640285_1640987_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.9e-20	32.3
WP_000930247.1\|1641110_1641704_-	dephospho-CoA kinase	NA	NA	NA	NA
WP_001114605.1\|1641694_1642516_-	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	2.5e-23	30.9
WP_000410033.1\|1642664_1643513_-	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA
WP_132833258.1\|1643600_1643669_+	peptide pheromone SHP2	NA	NA	NA	NA
WP_000694236.1\|1643730_1645323_+	transglutaminase	NA	NA	NA	NA
WP_000039433.1\|1645358_1645535_+	hypothetical protein	NA	NA	NA	NA
WP_025194877.1\|1645584_1645779_-	hypothetical protein	NA	NA	NA	NA
WP_079255206.1\|1645777_1645972_+	hypothetical protein	NA	NA	NA	NA
WP_079859572.1\|1646308_1646563_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA

DBSCAN-SWA_11

1704296 : 1715028

Streptococcus_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000767483.1\|1704296_1705124_+	exodeoxyribonuclease III	M1PSC0	Streptococcus_phage	9.6e-124	77.7
WP_000287943.1\|1705163_1705520_-	arsenate reductase family protein	M1PLC0	Streptococcus_phage	5.2e-42	72.6
WP_000966771.1\|1705521_1705998_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	9.3e-39	50.3
WP_000232153.1\|1706054_1707236_-	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	3.1e-168	75.6
WP_000158396.1\|1707914_1709006_-	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	8.7e-165	77.9
WP_000603276.1\|1709138_1709774_+	copper homeostasis protein CutC	NA	NA	NA	NA
WP_000425857.1\|1710043_1710913_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	4.1e-109	70.0
WP_000358198.1\|1710912_1711239_-	DNA replication initiation control protein YabA	M1PFV3	Streptococcus_phage	3.2e-30	61.1
WP_000364547.1\|1711268_1712132_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.5e-74	49.7
WP_000715592.1\|1712151_1712787_-	dTMP kinase	M1PSC7	Streptococcus_phage	2.8e-67	61.1
WP_017649913.1\|1712875_1713535_-	CBS domain-containing protein	M1NSC5	Streptococcus_phage	1.8e-64	55.5
WP_000178146.1\|1713553_1714264_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.7e-18	28.5
WP_001185985.1\|1714263_1715028_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.6e-14	24.8

DBSCAN-SWA_12

1991325 : 2065638

Streptococcus_phage(27.78%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_070005711.1\|1991325_1992807_-\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	4.9e-203	74.5
WP_000205037.1\|1992933_1994226_-	adenylosuccinate synthase	G5CQQ4	Megavirus	5.1e-71	36.7
WP_001021300.1\|1994598_1995621_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_000356661.1\|1995982_1996657_+	PAS domain-containing protein	NA	NA	NA	NA
WP_069987907.1\|1996826_1999079_+	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	NA	NA	NA	NA
WP_000239571.1\|1999202_2000021_+	hypothetical protein	M1PFV6	Streptococcus_phage	4.4e-28	36.0
WP_001285395.1\|2000017_2001274_+	toxic anion resistance protein	M1PLC8	Streptococcus_phage	2.5e-123	63.3
WP_000357823.1\|2001413_2002289_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_000192732.1\|2002272_2003250_+\|tRNA	tRNA dihydrouridine synthase DusB	NA	NA	NA	NA
WP_000909522.1\|2003370_2004012_+	deoxynucleoside kinase	C1KFI3	Lactobacillus_virus	1.3e-51	50.0
WP_000586901.1\|2004025_2004517_+	N-acetyltransferase	NA	NA	NA	NA
WP_000020282.1\|2004736_2007184_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	6.8e-125	38.4
WP_000985641.1\|2007180_2007645_-	CtsR family transcriptional regulator	NA	NA	NA	NA
WP_001106578.1\|2007817_2008279_+	small multi-drug export protein	NA	NA	NA	NA
WP_000808082.1\|2008438_2009479_-	elongation factor Ts	NA	NA	NA	NA
WP_000268454.1\|2009572_2010343_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_000060538.1\|2010619_2011180_+	peroxiredoxin	NA	NA	NA	NA
WP_000242132.1\|2011197_2012730_+	alkyl hydroperoxide reductase subunit F	V9VEY6	Lactococcus_phage	2.7e-18	30.3
WP_070005712.1\|2012862_2014365_+\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	5.0e-203	74.5
WP_000393091.1\|2014572_2016642_-	sodium:proton antiporter	NA	NA	NA	NA
WP_000080856.1\|2016643_2016880_-	hypothetical protein	NA	NA	NA	NA
WP_000737083.1\|2017046_2018000_+	LD-carboxypeptidase	NA	NA	NA	NA
WP_000599031.1\|2018049_2019945_-	endopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	7.9e-73	30.9
WP_000570855.1\|2020092_2021076_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_000689140.1\|2021121_2022285_-	MFS transporter	NA	NA	NA	NA
WP_000350698.1\|2022396_2023041_+	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA
WP_001272875.1\|2023106_2023721_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.8e-13	38.2
WP_000038818.1\|2023791_2024793_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_069987785.1\|2024872_2026777_-	alginate lyase family protein	NA	NA	NA	NA
WP_000147946.1\|2026856_2027672_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA
WP_000355264.1\|2027658_2028525_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA
WP_000718802.1\|2028560_2029055_-	PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB	NA	NA	NA	NA
WP_000975713.1\|2029109_2030306_-	glycoside hydrolase family 88 protein	NA	NA	NA	NA
WP_000590445.1\|2030308_2030743_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000139173.1\|2031020_2031833_+	monomeric 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase DhuD	NA	NA	NA	NA
WP_000684790.1\|2031849_2032491_+	5-dehydro-4-deoxy-D-glucuronate isomerase DhuI	NA	NA	NA	NA
WP_000034933.1\|2032516_2033524_+	sugar kinase	NA	NA	NA	NA
WP_000597402.1\|2033535_2034174_+	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA
WP_025193273.1\|2035373_2036735_+	hypothetical protein	NA	NA	NA	NA
WP_000008880.1\|2036906_2037521_-	nitroreductase family protein	NA	NA	NA	NA
WP_000526288.1\|2037653_2038079_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_001292132.1\|2038205_2042612_-	PolC-type DNA polymerase III	A0A0A7RWA3	Clostridium_phage	6.9e-19	33.0
WP_000842268.1\|2042734_2043319_-	glycoside hydrolase family 73 protein	S5M9Y4	Brevibacillus_phage	3.8e-10	34.7
WP_079859582.1\|2043443_2045297_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000900646.1\|2045388_2046648_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_000664686.1\|2046678_2047473_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_000469560.1\|2047487_2048240_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	1.8e-23	42.4
WP_000056607.1\|2048406_2048748_-	preprotein translocase subunit YajC	NA	NA	NA	NA
WP_000286792.1\|2048824_2049169_-	thiol reductase thioredoxin	NA	NA	NA	NA
WP_000468678.1\|2049320_2050790_-\|transposase	IS1182-like element IS1563 family transposase	A0A1X9I5T2	Streptococcus_phage	1.3e-203	74.8
WP_000786048.1\|2052096_2053434_-	2-hydroxycarboxylate transporter family protein	A0A140XAH4	Dickeya_phage	5.3e-15	50.0
WP_000382774.1\|2055115_2055865_+	response regulator	NA	NA	NA	NA
WP_000279626.1\|2055814_2056810_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	8.8e-47	35.2
WP_000716726.1\|2056897_2058505_-	alpha-glucosidase	NA	NA	NA	NA
WP_000229966.1\|2058633_2059767_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	G9BWD6	Planktothrix_phage	3.2e-21	32.7
WP_000345946.1\|2059867_2060719_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001018630.1\|2060813_2061710_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_088881664.1\|2064494_2065638_+\|transposase	IS3 family transposase	A0A1P8CWP5	Bacillus_phage	2.6e-10	39.5

DBSCAN-SWA_13

2243550 : 2250724

Staphylococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001042665.1\|2243550_2244225_-	transglycosylase SLT domain-containing protein	Q4Z8Z7	Staphylococcus_phage	8.9e-27	54.3
WP_000029069.1\|2244330_2244870_-	LysM peptidoglycan-binding domain-containing protein	A0A249XZV3	Enterococcus_phage	1.3e-17	46.4
WP_000359358.1\|2245085_2245880_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_000510606.1\|2245872_2246715_-	energy-coupling factor transporter ATPase	A0A2H4PQG7	Staphylococcus_phage	2.0e-15	28.5
WP_000181758.1\|2246690_2247530_-	energy-coupling factor transporter ATPase	G9BWD6	Planktothrix_phage	3.5e-20	30.0
WP_000239225.1\|2247529_2248072_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_000217762.1\|2248194_2249478_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	1.6e-05	23.6
WP_000706188.1\|2249479_2250724_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	3.7e-87	41.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage