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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT546646 Bordetella trematum strain H044680328 plasmid 2, complete sequence 0 crisprs NA 0 0 0 0
NZ_LT546645 Bordetella trematum strain H044680328 chromosome 1 1 crisprs DEDDh,csa3,DinG,cas3,RT 0 0 6 0

Results visualization

1. NZ_LT546645
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT546645_1 306931-307042 Orphan NA
1 spacers
DEDDh

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 143261 : 161592 17 Burkholderia_virus(69.23%) terminase NA
DBSCAN-SWA_2 286739 : 322643 51 Burkholderia_virus(16.67%) protease,capsid,terminase,portal,integrase,tRNA,head,transposase,tail attL 279798:279857|attR 319604:319706
DBSCAN-SWA_3 2339200 : 2428966 84 uncultured_Caudovirales_phage(15.38%) holin,protease,head,capsid,terminase,portal,integrase,tRNA,plate,transposase,tail attL 2327759:2327774|attR 2431581:2431596
DBSCAN-SWA_4 3307782 : 3327380 24 Pseudomonas_phage(31.58%) terminase,tail NA
DBSCAN-SWA_5 4128311 : 4149873 20 Pseudomonas_phage(70.0%) head NA
DBSCAN-SWA_6 4163295 : 4171820 12 Pseudomonas_phage(37.5%) integrase attL 4163421:4163435|attR 4181842:4181856
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage