Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_LT571437 Salmonella enterica subsp. enterica serovar Java strain NCTC5706 chromosome 1 5 crisprs cas3,PD-DExK,WYL,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,csa3,DEDDh,DinG 0 9 9 0

Results visualization

1. NZ_LT571437
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT571437_1 593564-593664 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT571437_2 625047-625275 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT571437_3 950680-950764 TypeI-E I-E
1 spacers
cas3,cas8e,cse2gr11,cas7

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT571437_4 966942-967336 TypeI-E I-E
6 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_LT571437_5 967410-967926 TypeI-E I-E
8 spacers
cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NZ_KY296095 Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence 32689-32720 6 0.812
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NZ_CP024631 Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence 7133-7164 6 0.812
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NZ_MH734334 Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence 45685-45716 6 0.812
NZ_LT571437_4 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967032-967063 32 NC_030925 Bacillus phage Shbh1, complete genome 81990-82021 7 0.781
NZ_LT571437_4 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967032-967063 32 NC_028820 Yersinia phage vB_YenM_TG1, complete genome 38509-38540 7 0.781
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NZ_CP020561 Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence 30704-30735 7 0.781
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NZ_MN433456 Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence 30247-30278 7 0.781
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP021368 Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence 139732-139763 8 0.75
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP021649 Acidovorax sp. T1 plasmid p1-T1, complete sequence 81978-82009 8 0.75
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP021364 Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence 2319-2350 8 0.75
NZ_LT571437_4 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT 967154-967184 31 NZ_CP037868 Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence 18058-18088 8 0.742
NZ_LT571437_4 4.8|967275|32|NZ_LT571437|CRISPRCasFinder,CRT 967275-967306 32 NC_012520 Rhodococcus opacus B4 plasmid pROB01, complete sequence 539213-539244 8 0.75
NZ_LT571437_5 5.2|967500|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967500-967531 32 NZ_CP034149 Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence 495846-495877 8 0.75
NZ_LT571437_5 5.2|967500|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967500-967531 32 MK047641 Phage NV21, complete genome 1789-1820 8 0.75
NZ_LT571437_5 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967744-967775 32 NC_021709 Alteromonas mediterranea 615 plasmid unnamed, complete sequence 120479-120510 8 0.75
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP034172 Chryseobacterium taklimakanense strain H4753 plasmid unnamed, complete sequence 24561-24592 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP015203 Rhodococcus sp. 008 plasmid pR8L1, complete sequence 183205-183236 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP049158 Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence 989932-989963 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP044283 Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence 43637-43668 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP049318 Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence 994612-994643 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP017303 Rhodococcus sp. YL-1 plasmid pYLL1 sequence 346813-346844 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP017304 Rhodococcus sp. YL-1 plasmid pYLL2 sequence 293257-293288 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 37496-37527 9 0.719
NZ_LT571437_4 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967032-967063 32 MN604230 Bacillus phage vB_BcM_Sam112, complete genome 2760-2791 9 0.719
NZ_LT571437_4 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967032-967063 32 MN604698 Bacillus phage vB_BcM_Sam46, complete genome 2760-2791 9 0.719
NZ_LT571437_4 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967032-967063 32 NZ_CP031005 Lactobacillus curvatus strain TMW 1.1928 plasmid p-1.1928_2, complete sequence 18487-18518 9 0.719
NZ_LT571437_4 4.4|967154|32|NZ_LT571437|PILER-CR 967154-967185 32 NZ_CP037868 Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence 18057-18088 9 0.719
NZ_LT571437_4 4.4|967154|32|NZ_LT571437|PILER-CR 967154-967185 32 MH651189 Gordonia phage Schmidt, complete genome 39255-39286 9 0.719
NZ_LT571437_4 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT 967154-967184 31 MH651189 Gordonia phage Schmidt, complete genome 39255-39285 9 0.71
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN694646 Marine virus AFVG_250M1067, complete genome 6939-6970 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN694813 Marine virus AFVG_250M1071, complete genome 5735-5766 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN694441 Marine virus AFVG_250M1066, complete genome 33070-33101 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN694492 Marine virus AFVG_250M1068, complete genome 6277-6308 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN693639 Marine virus AFVG_250M1070, complete genome 33106-33137 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN694318 Marine virus AFVG_250M1065, complete genome 5478-5509 9 0.719
NZ_LT571437_5 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 967805-967836 32 MN693657 Marine virus AFVG_250M1069, complete genome 6020-6051 9 0.719
NZ_LT571437_4 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT 966971-967002 32 NZ_CP042915 Rhodococcus qingshengii strain RL1 plasmid unnamed2 50041-50072 10 0.688
NZ_LT571437_4 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT 967154-967184 31 NC_008771 Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence 19099-19129 10 0.677
NZ_LT571437_5 5.8|967866|32|NZ_LT571437|CRISPRCasFinder,CRT 967866-967897 32 NC_016113 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence 1151729-1151760 10 0.688
NZ_LT571437_5 5.8|967866|32|NZ_LT571437|CRISPRCasFinder,CRT 967866-967897 32 NC_017585 Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence 661429-661460 10 0.688
NZ_LT571437_4 4.4|967154|32|NZ_LT571437|PILER-CR 967154-967185 32 NC_008771 Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence 19099-19130 11 0.656

1. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY296095 (Pseudomonas aeruginosa strain 14057 plasmid p14057-KPC, complete sequence) position: , mismatch: 6, identity: 0.812

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gctgatcgggcgctggagaacagcatcaatat	Protospacer
***.*   ****** ********.********

2. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024631 (Pseudomonas aeruginosa strain PA59 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.812

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gctgatcgggcgctggagaacagcatcaatat	Protospacer
***.*   ****** ********.********

3. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MH734334 (Pseudomonas aeruginosa strain 1011 plasmid p1011-KPC2, complete sequence) position: , mismatch: 6, identity: 0.812

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gctgatcgggcgctggagaacagcatcaatat	Protospacer
***.*   ****** ********.********

4. spacer 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NC_030925 (Bacillus phage Shbh1, complete genome) position: , mismatch: 7, identity: 0.781

aatttcctttttagaatccgataagttgccta--	CRISPR spacer
tatttccttctaagaatccgataag--aactagc	Protospacer
 ********.* *************  . ***  

5. spacer 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NC_028820 (Yersinia phage vB_YenM_TG1, complete genome) position: , mismatch: 7, identity: 0.781

aatttcctttttagaatccgataagttgccta-	CRISPR spacer
tttatcttttttagaatcagataagtt-cttac	Protospacer
  * **.*********** ******** *.** 

6. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020561 (Pseudomonas aeruginosa strain CR1 plasmid pCR1, complete sequence) position: , mismatch: 7, identity: 0.781

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gcggatcgggcgctggagaacagcatcaatat	Protospacer
** .*   ****** ********.********

7. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_MN433456 (Pseudomonas aeruginosa strain PAB546 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.781

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gcggatcgggcgctggagaacagcatcaatat	Protospacer
** .*   ****** ********.********

8. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021368 (Acidovorax carolinensis strain P4 plasmid pACP4.2, complete sequence) position: , mismatch: 8, identity: 0.75

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
cggcgtgctggtcaaaggcggcggccctttgg	Protospacer
 *****************.*.****..* *  

9. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021649 (Acidovorax sp. T1 plasmid p1-T1, complete sequence) position: , mismatch: 8, identity: 0.75

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
cggcgtgctggtcaaaggcggcggccctttgg	Protospacer
 *****************.*.****..* *  

10. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021364 (Acidovorax carolinensis strain P3 plasmid pACP3.2, complete sequence) position: , mismatch: 8, identity: 0.75

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
cggcgtgctggtcaaaggcggcggccctttgg	Protospacer
 *****************.*.****..* *  

11. spacer 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT matches to NZ_CP037868 (Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence) position: , mismatch: 8, identity: 0.742

gcatcgcctggctgagtccgtcgctaactgc	CRISPR spacer
ccatcgcctcgctgagttcgtcgcccggtga	Protospacer
 ******** *******.******. . ** 

12. spacer 4.8|967275|32|NZ_LT571437|CRISPRCasFinder,CRT matches to NC_012520 (Rhodococcus opacus B4 plasmid pROB01, complete sequence) position: , mismatch: 8, identity: 0.75

ggcgcgcgtgttgttggtgattccgcatatct	CRISPR spacer
cccccagatgttgttggtgattcttcatatct	Protospacer
  * *. .***************. *******

13. spacer 5.2|967500|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034149 (Pantoea agglomerans strain L15 plasmid pPagL15_1, complete sequence) position: , mismatch: 8, identity: 0.75

taaacacctcttctggatatccgttaccaaac	CRISPR spacer
tgaccggttcttctggatattcgttaacaaag	Protospacer
*.* *. .************.***** **** 

14. spacer 5.2|967500|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MK047641 (Phage NV21, complete genome) position: , mismatch: 8, identity: 0.75

taaacacctcttctggatatccgttaccaaac	CRISPR spacer
ggatcagttcttctggatattcgttaacaaag	Protospacer
 .* ** .************.***** **** 

15. spacer 5.6|967744|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NC_021709 (Alteromonas mediterranea 615 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.75

gctaaaacggcgcttgagaacagtatcaatat	CRISPR spacer
gctaaaaaggcgattgagaacagcgataccat	Protospacer
******* **** **********.. .* .**

16. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034172 (Chryseobacterium taklimakanense strain H4753 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
cataatgctggttaaaggtaacggctttgtta	Protospacer
 .  .*******.******.**********. 

17. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015203 (Rhodococcus sp. 008 plasmid pR8L1, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
gttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
*  *  . *****************  **** 

18. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
ccgcgtgctggtcataggtgagggccaactgc	Protospacer
  ************ ****** ***.   * *

19. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044283 (Rhodococcus erythropolis strain X5 plasmid pRhX5, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
gttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
*  *  . *****************  **** 

20. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
ccgcgtgctggtcataggtgagggccaactgc	Protospacer
  ************ ****** ***.   * *

21. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017303 (Rhodococcus sp. YL-1 plasmid pYLL1 sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
gttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
*  *  . *****************  **** 

22. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
gttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
*  *  . *****************  **** 

23. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 9, identity: 0.719

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
gttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
*  *  . *****************  **** 

24. spacer 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN604230 (Bacillus phage vB_BcM_Sam112, complete genome) position: , mismatch: 9, identity: 0.719

aatttcctttttagaatccgataagttgccta	CRISPR spacer
aatttcgttgttagaatccgataatgaacggt	Protospacer
****** ** **************   .*   

25. spacer 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN604698 (Bacillus phage vB_BcM_Sam46, complete genome) position: , mismatch: 9, identity: 0.719

aatttcctttttagaatccgataagttgccta	CRISPR spacer
aatttcgttgttagaatccgataatgaacggt	Protospacer
****** ** **************   .*   

26. spacer 4.2|967032|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031005 (Lactobacillus curvatus strain TMW 1.1928 plasmid p-1.1928_2, complete sequence) position: , mismatch: 9, identity: 0.719

aatttcctttttagaatccgataagttgccta	CRISPR spacer
aatttcctttgtagaatccgctactgtaaatg	Protospacer
********** ********* **   *.  *.

27. spacer 4.4|967154|32|NZ_LT571437|PILER-CR matches to NZ_CP037868 (Hydrogenophaga pseudoflava strain DSM 1084 plasmid pDSM1084, complete sequence) position: , mismatch: 9, identity: 0.719

gcatcgcctggctgagtccgtcgctaactgcg	CRISPR spacer
ccatcgcctcgctgagttcgtcgcccggtgaa	Protospacer
 ******** *******.******. . ** .

28. spacer 4.4|967154|32|NZ_LT571437|PILER-CR matches to MH651189 (Gordonia phage Schmidt, complete genome) position: , mismatch: 9, identity: 0.719

gcatcgcctggctgagtccgtcgctaactgcg	CRISPR spacer
agatcgccgggctgaatccgtcgctgcactcg	Protospacer
. ****** ******.*********.  . **

29. spacer 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT matches to MH651189 (Gordonia phage Schmidt, complete genome) position: , mismatch: 9, identity: 0.71

gcatcgcctggctgagtccgtcgctaactgc	CRISPR spacer
agatcgccgggctgaatccgtcgctgcactc	Protospacer
. ****** ******.*********.  . *

30. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN694646 (Marine virus AFVG_250M1067, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

31. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN694813 (Marine virus AFVG_250M1071, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

32. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN694441 (Marine virus AFVG_250M1066, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

33. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN694492 (Marine virus AFVG_250M1068, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

34. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN693639 (Marine virus AFVG_250M1070, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

35. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN694318 (Marine virus AFVG_250M1065, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

36. spacer 5.7|967805|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to MN693657 (Marine virus AFVG_250M1069, complete genome) position: , mismatch: 9, identity: 0.719

cttcatctcgcagtacgtaaacgcctgcatca	CRISPR spacer
agcaatctcgcagtatgtcaacgcctgtttcc	Protospacer
  . ***********.** ********. ** 

37. spacer 4.1|966971|32|NZ_LT571437|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042915 (Rhodococcus qingshengii strain RL1 plasmid unnamed2) position: , mismatch: 10, identity: 0.688

gggcgtgctggtcaaaggtgacggctttgtcc	CRISPR spacer
cttccaagtggtcaaaggtgacggcggtgtcg	Protospacer
   *  . *****************  **** 

38. spacer 4.6|967154|31|NZ_LT571437|CRISPRCasFinder,CRT matches to NC_008771 (Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence) position: , mismatch: 10, identity: 0.677

gcatcgcctggctgagtccgtcgctaactgc	CRISPR spacer
tcatcgcctcgctgagttcgtcgccgtaaaa	Protospacer
 ******** *******.******..   . 

39. spacer 5.8|967866|32|NZ_LT571437|CRISPRCasFinder,CRT matches to NC_016113 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCAT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

40. spacer 5.8|967866|32|NZ_LT571437|CRISPRCasFinder,CRT matches to NC_017585 (Streptomyces cattleya NRRL 8057 = DSM 46488 plasmid pSCATT, complete sequence) position: , mismatch: 10, identity: 0.688

aggggcgttccgcagtcgacaagggctgaaaa	CRISPR spacer
ccgggcggtccgcagtcgacgagggtgaggga	Protospacer
  ***** ************.****. ....*

41. spacer 4.4|967154|32|NZ_LT571437|PILER-CR matches to NC_008771 (Verminephrobacter eiseniae EF01-2 plasmid pVEIS01, complete sequence) position: , mismatch: 11, identity: 0.656

gcatcgcctggctgagtccgtcgctaactgcg	CRISPR spacer
tcatcgcctcgctgagttcgtcgccgtaaaaa	Protospacer
 ******** *******.******..   . .

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1134491 : 1236157 97 Erwinia_phage(23.21%) tail,head,plate,transposase,integrase,lysis,terminase,portal,capsid,tRNA attL 1192606:1192621|attR 1212659:1212674
DBSCAN-SWA_2 1618200 : 1647769 32 Salmonella_phage(33.33%) tail,protease,holin NA
DBSCAN-SWA_3 1719821 : 1728992 10 Enterobacteria_phage(66.67%) tRNA NA
DBSCAN-SWA_4 1797262 : 1807768 10 Enterobacteria_phage(37.5%) NA NA
DBSCAN-SWA_5 1901705 : 1908955 8 Morganella_phage(33.33%) NA NA
DBSCAN-SWA_6 2015171 : 2066751 63 Salmonella_phage(20.83%) head,tail,holin,plate,lysis,integrase attL 2016252:2016281|attR 2062770:2062799
DBSCAN-SWA_7 2867555 : 2965696 97 Salmonella_phage(40.0%) tail,holin,lysis,terminase,portal,protease,tRNA NA
DBSCAN-SWA_8 3016083 : 3023394 7 Ralstonia_phage(16.67%) protease,integrase attL 3010881:3010895|attR 3022130:3022144
DBSCAN-SWA_9 4101712 : 4114400 13 Enterobacteria_phage(80.0%) integrase,transposase attL 4110945:4110961|attR 4119454:4119470
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage