CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT576042	Propionibacterium freudenreichii isolate PFRJS8 chromosome I	6 crisprs	csa3,cas3,WYL,DinG,DEDDh,csb1gr7,csb2gr5,csb3,cas1,cas2	1	33	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT576042_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_1

1236378-1236473

Orphan

Consensus_repeat	Method
GGGCTGGCCCTGGGGGTAGCCGGGCTGGCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT576042_1

>merge|NZ_LT576042|1|1236378-1236473|CRISPRCasFinder
TCCGAAGGCCTGTTGGTAGCCGGGCTGGCCCTGGGGGTAGCCGGGCTGGCCTTGGGGGTAGGTGCCCTGCGGGGGCTGCTGGTAACTGGGCTGGCC

>NZ_LT576042|1|1|1236378-1236473|CRISPRCasFinder
TCCGAAGGCCTGTTGGTAGCCGGGCTGGCC	CTGGGGGTAGCCGGGCTGGCCTTGGGGGTAGGTGCC
CTGCGGGGGCTGCTGGTAACTGGGCTGGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_048769889.1\|1237228_1238185_-\|ADP-ribosylglycohydrolase-family-protein	unknown	unknown	gnl\|CDD\|377122
NZ_LT576042.1\|WP_013161098.1\|1246928_1247546_+\|threonylcarbamoyl-AMP-synthase	unknown	unknown	gnl\|CDD\|183245
NZ_LT576042.1\|WP_172952776.1\|1240362_1241061_-\|TenA-family-protein	unknown	unknown	gnl\|CDD\|381700
NZ_LT576042.1\|WP_013161099.1\|1246437_1246860_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_013161101.1\|1244120_1244669_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_157761563.1\|1238289_1239594_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_013161119.1\|1224675_1225290_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|182632
NZ_LT576042.1\|WP_013161115.1\|1229411_1230014_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	unknown	unknown	gnl\|CDD\|235662
NZ_LT576042.1\|WP_048769887.1\|1234967_1235825_+\|trehalose-phosphatase	unknown	unknown	gnl\|CDD\|319767
NZ_LT576042.1\|WP_044636702.1\|1232487_1233066_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_LT576042.1\|WP_171035487.1\|1243204_1244023_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274382
NZ_LT576042.1\|WP_171035490.1\|1241209_1243096_+\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_LT576042.1\|WP_013161117.1\|1226164_1226836_-\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|376754
NZ_LT576042.1\|WP_044636128.1\|1226832_1229418_-\|cobyrinate-a,c-diamide-synthase	unknown	unknown	gnl\|CDD\|234896
NZ_LT576042.1\|WP_036941189.1\|1225383_1226163_-\|adenosylcobinamide-GDP-ribazoletransferase	unknown	unknown	gnl\|CDD\|234697
NZ_LT576042.1\|WP_036941182.1\|1230010_1231456_-\|cobyric-acid-synthase	unknown	unknown	gnl\|CDD\|234838
NZ_LT576042.1\|WP_112317788.1\|1233324_1234785_-\|trehalose-6-phosphate-synthase	unknown	unknown	gnl\|CDD\|340820
NZ_LT576042.1\|WP_013161113.1\|1231452_1232526_-\|cobalamin-biosynthesis-protein-CobD	unknown	unknown	gnl\|CDD\|234919
NZ_LT576042.1\|WP_048769897.1\|1244999_1246214_-\|pyrophosphate--fructose-6-phosphate-1-phosphotransferase	unknown	unknown	gnl\|CDD\|180620
NZ_LT576042.1\|WP_048769893.1\|1239932_1240289_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	unknown	unknown	gnl\|CDD\|319911

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_048769889.1\|1237228_1238185_-\|ADP-ribosylglycohydrolase-family-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	4.30071e-43
NZ_LT576042.1\|WP_013161098.1\|1246928_1247546_+\|threonylcarbamoyl-AMP-synthase	gnl\|CDD\|183245	PRK11630, PRK11630, threonylcarbamoyl-AMP synthase.	1.34966e-66
NZ_LT576042.1\|WP_172952776.1\|1240362_1241061_-\|TenA-family-protein	gnl\|CDD\|381700	cd19365, TenA_C-like, uncharacterized TenA_C proteins. This family of TenA proteins belongs to the TenA_C class as it has a conserved active site Cys residue; the double Glu residues identified in the active site of TenA_E from the archaeon Pyrococcus furiosus is conserved in this family. TenA_C proteins (EC 3.5.99.2) catalyze the hydrolysis of the thiamin breakdown product 4-amino-5-amino-methyl-2-methylpyrimidine (amino-HMP) to 4-amino-5-hydroxymethyl-2-methylpyrimidine (HMP) in a thiamin salvage pathway. It has also been suggested that TenA proteins act as transcriptional regulators based on changes in gene-expression patterns when TenA is overexpressed in Bacillus subtilis, however this effect may be indirect. This family includes mostly uncharacterized TenA_C- like proteins.	3.72379e-90
NZ_LT576042.1\|WP_048769893.1\|1239932_1240289_-\|glyoxalase/bleomycin-resistance/dioxygenase-family-protein	gnl\|CDD\|319911	cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA and similar domains. SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein.	1.17801e-06
NZ_LT576042.1\|WP_013161119.1\|1224675_1225290_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|182632	PRK10668, PRK10668, DNA-binding transcriptional repressor AcrR; Provisional.	1.45888e-11
NZ_LT576042.1\|WP_013161115.1\|1229411_1230014_-\|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase	gnl\|CDD\|235662	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase.	2.54605e-82
NZ_LT576042.1\|WP_048769887.1\|1234967_1235825_+\|trehalose-phosphatase	gnl\|CDD\|319767	cd01627, HAD_TPP, trehalose-phosphate phosphatase similar to Escherichia coli trehalose-6-phosphate phosphatase OtsB and Saccharomyces cerevisiae trehalose-phosphatase TPS2. Trehalose biosynthesis in bacteria is known through three pathways - OtsAB, TreYZ and TreS. The OtsAB pathway, also known as the trehalose 6-phosphate synthase (TSP)/ Trehalose-6-phosphate phosphatase (TPP) pathway, is the most common route known to be involved in the stress response of Escherichia coli. It involves converting glucose-6-phosphate and UDP-glucose to form trehalose-6-phosphate (T6P), catalyzed by TPS, the product of the otsA gene, this step is followed by the dephosphorylation of T6P to yield trehalose and inorganic phosphate, catalyzed by a specific TPP, the product of otsB gene. This OtsAB (or TSP/TPP) pathway, is also the most common route known to be involved in the stress response of yeast In Saccharomyces cerevisiae, the corresponding enzymes, TPS1p and TPS2p, form a multimeric synthase complex together with additional regulatory subunits encoded by Tsl1 and Tps3. Trehalose is a common disaccharide accumulated by organisms as a reservation of carbohydrate and in response to unfavorable growth conditions. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.90677e-29
NZ_LT576042.1\|WP_044636702.1\|1232487_1233066_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	9.54316e-31
NZ_LT576042.1\|WP_171035487.1\|1243204_1244023_+\|hypothetical-protein	gnl\|CDD\|274382	TIGR02997, RNA_polymerase_sigma_subunit_sigma70/sigma32, RNA polymerase sigma factor, cyanobacterial RpoD-like family. This family includes a number of closely related sigma-70 (TIGR02937) factors in the cyanobacteria. All appear most closely related to the essential sigma-70 factor RpoD, and some score above trusted to the RpoD C-terminal domain model (TIGR02393).	2.0467e-23
NZ_LT576042.1\|WP_171035490.1\|1241209_1243096_+\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	0
NZ_LT576042.1\|WP_013161117.1\|1226164_1226836_-\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	gnl\|CDD\|376754	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase. This family is composed of a group of bifunctional cobalamin biosynthesis enzymes which display cobinamide kinase and cobinamide phosphate guanyltransferase activity. The crystal structure of the enzyme reveals the molecule to be a trimer with a propeller-like shape.	1.86511e-70
NZ_LT576042.1\|WP_044636128.1\|1226832_1229418_-\|cobyrinate-a,c-diamide-synthase	gnl\|CDD\|234896	PRK01077, PRK01077, cobyrinate a,c-diamide synthase.	0
NZ_LT576042.1\|WP_036941189.1\|1225383_1226163_-\|adenosylcobinamide-GDP-ribazoletransferase	gnl\|CDD\|234697	PRK00235, cobS, cobalamin synthase; Reviewed.	2.22432e-40
NZ_LT576042.1\|WP_036941182.1\|1230010_1231456_-\|cobyric-acid-synthase	gnl\|CDD\|234838	PRK00784, PRK00784, cobyric acid synthase.	0
NZ_LT576042.1\|WP_112317788.1\|1233324_1234785_-\|trehalose-6-phosphate-synthase	gnl\|CDD\|340820	cd03788, GT20_TPS, trehalose-6-phosphate synthase. Trehalose-6-Phosphate Synthase (TPS, EC 2.4.1.15) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.	0
NZ_LT576042.1\|WP_013161113.1\|1231452_1232526_-\|cobalamin-biosynthesis-protein-CobD	gnl\|CDD\|234919	PRK01209, cobD, cobalamin biosynthesis protein.	1.32067e-104
NZ_LT576042.1\|WP_048769897.1\|1244999_1246214_-\|pyrophosphate--fructose-6-phosphate-1-phosphotransferase	gnl\|CDD\|180620	PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated.	0

>NZ_LT576042.1|WP_048769887.1|1234967_1235825_+|trehalose-phosphatase
MTSGSDLVSFPTDEGRATTEAIIDDPSNALICLDFDGTLAPIVADPQDARPDPEAMAALERLLTRVGRVAIVTGRPVDVALQLGGFAMLPDTSRLRVFGQYGAETWNGATGHIHVPAQPPAIGEAKLQIERMLADLSAQNPALRGTAIEDKGLAIGVHTRRAADPAEALVELTPRLDTLADRLGLITEPGRNVVELRAGHSDKGDVVAKLLDDPSIGAAAFCGDDLGDISAFAVLIKWRRRTGRRAACVVSASDEVPSLRERADVLCEGPSGIAAWLTSLTSTDS
>NZ_LT576042.1|WP_112317788.1|1233324_1234785_-|trehalose-6-phosphate-synthase
MPSAPADDGRTEDPVPRDAPAAGTSQFVVVANRLPVDRVQNDDDSSGWALSPGGLVTALIPVMKDHGGTWVGWVGSADEHIEPFTFDGYGIMPVDLSAQEFNEYYEGMSNATFWPLYHDCVEHPEYHREWWDSYMEVNQRFATAAAEVAAPGATVWVQDYQLQNVPALLRQMRPDLKIRFFLHIPFPPSELFMQLPWRYQVISGLLGSDQIGFQDPGSARNFAHLVRRLAGMRTQGDRIFSPDGRVILARAYPISIDAQEILDLSRTPQARAEAEQLREDLGNPDKIFLGVDRLDYTKGLRHRVRAFGELFTSGQLDPMRNVYLQIATPTREGVARYQVLRSIIDEMVGRINSSVGRIGRSPIEYRHASYPKMALAAMYRAADVMVVTPLRDGMNLVAKEYVASHDSDAGALVLSEFAGASLELKQAYMVNPYDLNGMKNQLLRAAGDTHANHVRRMRSMRKQVFRHDIDAWANSFLTDLGTERPV
>NZ_LT576042.1|WP_044636702.1|1232487_1233066_+|histidine-phosphatase-family-protein
MLDRGIDFALVRHGESTGNIGGRVLGHELGPELTTLGRTQARGAAHGLTRWHADMLWSSDMVRARSTAQEIAQTTRLPLNCTALLREQDHGAMDGLPVGDLVAQPTPAGREITEVRWGGGESIADVYARLRLFVMMVAARGARRVVVVGHGDMACAFTSMLAGLGHRDVAWDRLAHGQVRYLGWDGRALLPS
>NZ_LT576042.1|WP_013161113.1|1231452_1232526_-|cobalamin-biosynthesis-protein-CobD
MAHQGEIDAAIKHAVSLAADDHGWGSRAVGLISAVTADRLIPDPANPWHPVAWFGTWAGWLEKKMWRDSVGQGAAYLVVALLPVATLGVAVEAATRRHPLAHATATAAAGWLVIGSQSLATEGEQMADELEGDDLSAARDRLPHLCGRIPDTMPEQELARGTIESLAENTADSGVASLWWGSVAGIPGMLIHRASNTLDAMVGHHNEHFEHFGKCAARLDDGLDWIPARLTGILGAICAPSVGGRVVTTARIVARDARNHPSPNGGWCESAWAGALGVQLGGRNVYPGGRVEHRGLLGDGHRPRAGQVRDGARLVRVVTAAATALAAGACLGIGQLIRAHSSARKAPTHSPSRKASR
>NZ_LT576042.1|WP_036941182.1|1230010_1231456_-|cobyric-acid-synthase
MTGILLTGTSSDAGKSALVTGLCGALRQRGIDVAPFKSQNMSNNSMVCPDGAEIGRAQYLQATAAGVTPEAAMNPVLLKPGTDRRSFIVLMGRPDGELDAGEYATGRKHLAEAAYDAYSDLASRHELIVCEGAGSPAEINLRAGDYVNMGLARHFGLPTVIIGDIDRGGVLASLYGTWALLEAEDRALLKGYIINKFRGDGALLEPGLQEITTRTGLANLGVMPWLEDVWFDGEDALQVDRWPAQSGAGDRLVVAAVRLPRISNSTDIDALATEPGVEVQVTADPATCARADLVVLPGSRATVDDLDWLRKRGIAQAIVQRRREDKPILGICGGFEMMANTIDDDIESSAGSVPGLGVLPARFRFDAEKVVRTAQYHFDELAVDGYEIHHGRFEVDGGEAFLDGVRSGNSFGTMLHGSLENDGFRRRFLHMVARNTGSTWEPDDARPGYQQLRATMIRTLSTAMAEYVDVDAMLAMTGLAR
>NZ_LT576042.1|WP_013161115.1|1229411_1230014_-|cob(I)yrinic-acid-a,c-diamide-adenosyltransferase
MSGSAPQRTEPTTAELRHRPRLIVNTGNGKGKSTAAFGMGLRAWAQGWSIGVFQFIKSGRWHTGEQQAYAQLDQAHRTTGVGGPVEWQSLGSGWSWLRATEGTDQAAMAAAGWAHVRTLLAAQTHRLYILDEFAHVLNKGWLDVDEVADDLAHRPGTQHVVITGRNCPAGIIGIADIVTSMDNVKHPFGKGERGQAGIEW
>NZ_LT576042.1|WP_044636128.1|1226832_1229418_-|cobyrinate-a,c-diamide-synthase
MVTATALPRVLIAAPASSQGKTTVAIGLMAALRASGRSVAGFKVGPDYIDPGYHALACGRPGRNLDPYLCGPERIAPLFAHGALHPEPADISVVEGVMGMFDGKLGAWPDGTDDPAGFGSSAHIARLLDAPVLLVVDGSHSARTAAALCHGLASYDPRIHVAGVILNRVMGARVVDEITRGCARVGLPVLGALPKSTRVAVGSRHLGLVTADEQGDAIGIVQQAGELVAAHLDLDAIATIAGGAPDLAVDPWDPAAEVEPVPGRPVIAMASGPAFTFRYTETAELLEAAGCRVTAFDPLTARGLPADVSGLYLGGGFPEEHAEALAGNTSLGAEIASRVSEGLPTVAECAGLLYLCRSLDGLAMAGVVDADSSMTPRLTIGYHHARAANDSFLMRAGERYRAHEFHRTTLDTPPYDRDPGPQRLGDQRLAWDVETPTGGNRPEGVLVAPTPGSAPSVHASYQHLHWAGSPVLAQRFARAASEYGHTGHHSPRPAATTPGDALSAAPDLTHHGDRDVLPGLVDLAVNVRDVRPPAWLVERIVASSDQWAHYPDQREATRAVALRHGVNPDQVLLTAGSSEAFSLIAHGFSPRWAVVVHPQFTEPEVALRNAGRPVGRLVLHASDGFQFDHELLDPRADMVVIGNPTNPTGVLHSAASLRALCRPGRVVVVDEAFMDAVPGEPESLIGARMDGLLVTRSFTKTWSVPGLRIGYVVGDPALIRVLAHEQPCWPISTPALVTARECSTPRAVEQATSDARQAAQDRRHLVARLAGIGIQTVGEARAPFVLVDLRAHPPGGLRAGLRTLGFTVRSGESFPGLGAGWLRLAVRHPDISDAFVAALARTIDALDTAQHPMRPPQGDIR
>NZ_LT576042.1|WP_013161117.1|1226164_1226836_-|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase
MTRIVVDVPDSPESRRLLDQLSGLGARQRPARTLVTGGARSGKSSYAEALLGSFDHVDYIATSQRNPDDPEWMARIAAHVARRPKSWNTVETLDVAQVLSDDGSPALVDCLGVWLTRELDVTDAWQHPEQARPELQHRIDELATAVAGSPRRVVLVTNEVGSGVVPATQAGRTFRDWLGILNASVADACDEVLLCVAGRALSLPPRPGGPHGAGTDPQPKDAI
>NZ_LT576042.1|WP_036941189.1|1225383_1226163_-|adenosylcobinamide-GDP-ribazoletransferase
MATRNGLLAAWGLFTVLPAPVVAEVDERLAVRAIASMPWVGLGLGLIAGLGCAIVTVAGGGQPLAIAAGLAILALCTGFLHLDGLADTADGLGSRKPAHEALTIMRQSDIGPMGVTAIILVLALEIAAGGSGHLDGWRGVWLLVTMPMVARVSALSATGRWIPSAHKKGFGALFAGKTHPATIVVASVIAAVIAAGSGWLLFGWRAALVAVCACLASWVFGVAWRRHILARLGGLTGDTFGSLVEMSGLAYLLTLALFA
>NZ_LT576042.1|WP_013161119.1|1224675_1225290_-|TetR/AcrR-family-transcriptional-regulator
MPLHVAHRPTRQQVRRKVIDAASRAFRTHGYARASMTQIAESAGFTKGAVYSNFESKPELFSTICIENINRLSPPVIAELDAMFANGARDASAIDRIADSFAQIVIESGPWQVALGEFRQLAVHDPQVAESYATLLRERTEQAMRLLDGHPLARRLGPQRTREAIWTVFELISLLALEHAAAPHMVTPAAIRSVLASVLGGLSA
>NZ_LT576042.1|WP_048769889.1|1237228_1238185_-|ADP-ribosylglycohydrolase-family-protein
MEFSPQVRDRAAGVLVGQAVGDALGVPYEFAAPIRAGDARMVGGGLGPYEPGEWSDDTQMAVCVARVAASGTRLTRSDALDAVAAAFIDWKHNAASDIGNQTATVLEMASRHDGVGLGEAMTAIARDVGRQGQAGNGGLMRTSVVGLAAVDSAEETANAAARVCALTHGEPRCIESSVLWSLAVRNAVLTGNLDVRSGLPQLAPERRSWWQRQIASAEDGPPSSFTPNGYTVTAFQAAWASIHATAHLDGTQHIAAALQEAVSIGNDTDTVAAIAGGLLGAAYGASRIPGNWVDRVHGWPGLRAGGLRELALAMLTAA
>NZ_LT576042.1|WP_157761563.1|1238289_1239594_-|hypothetical-protein
MATLNQAGDLLGVSRERIRQVMARITPALQGMLRTQLGMIALTIAQYSPATEPVGRYLAPLGLSRPTLTGEGFLNLLKLTGTSAGELIGDDLVAVDGWLVRGTQMQVTKSLPMANRQTSSFGMTTITTICHALMTPSESPDPAAVQRILRAEPTVRWFGDWLWVHKDDQGPHANRLVNTARSILSVNSPQTITSIHEGAQRLWKFRRLELLPPVEAMRAFFGNHSGFEVDGDQVRALEPLDYHEVLGGVTATMIDILKSSPYQVMDRQSLREACREAGIAPGTSTVWTTYAEWMQKFAQNVWGLRGSEPDMQAVERIRRAARARSEAEPHRKSSSLIPGGAIQTMDVTTSCLATGVLSFAPEVHRLVAGSALDIVRASESLGTAKFGASHFFSWGWLPMLRSLDAKPGDVLRISIDPAAARAEVQLGGPELWGP
>NZ_LT576042.1|WP_048769893.1|1239932_1240289_-|glyoxalase/bleomycin-resistance/dioxygenase-family-protein
MSEGNVIRVLARIYVDDLAGSLPLYEQLTGQSSPHTFTFGATRLARVGDFLLIEGADARVRSHAATIAVRDVAEVVAAVTKAGGQLLEGPAEGPNGPRLVARHPDGNVVEYVQVSEEG
>NZ_LT576042.1|WP_172952776.1|1240362_1241061_-|TenA-family-protein
MMRMQTDPPTSGPAAVGRQITDGWWGRIGDIRRQIDELEFIRGLGDGSLPREAFLWYLRQDALYLHDYARILAAAGEVSPTPAEQEFWTHGAQSSVAMELELHKSWIPADAMAHLAPSPVTQAYLDQLADVAAGGDYGQIVAAVLPCYWIYADVGARLARLNRPGHRYGSWLDTYSDEEFAEQTRQAIGFAGAAAARSTEPGRHRMWQAFNEASWHELRFFAAPLELGVREG
>NZ_LT576042.1|WP_171035490.1|1241209_1243096_+|DNA-primase
MHRLHAMAGRINDEDIALVRERARIDNIVGAYVTLRNAGGGSLKGLCPFHDEKTPSFQVTPARGLFYCFGCGVGGDVITFMQKIDNLTFTEAVQTLADKVGVQLRIVDDGKPSLPAGLRVRIMEANKLAAEFYSKALAAPEALEARRMLDGRGFDRPAAEHFGVGYAPRDGRALHRHLNHAGFRDDELVSAGLIREHGGWDYFQGRVMWPIKDSGASVLGFGARHLYDDDRLPAKYINTPETPVYKKSHVLYGLDLARQNIGKKLQAVVMEGYTDVMSAHLAGVDTAVAVCGTAFGPDHARLLQRLMGNNDSTQGEIVFTFDGDKAGQAAALKVYKLDRSFTTQTYVAVEPNGLDPCDLRMAKGDAAVRELVGRREPLYRYVMAHTVAGYDLDRADGRVAAVRAAAGMLASIRDANLVGEYVRDLSRLVGMDVDEVRRILKQARNQGAGGRREPPVPVVSEDADPVEPGDSPGWPDRNDRNLDVERGTLKLMLQHPTLFDTAWNGVSTSDFTHPAFRALFGAILSTPYVPTGWTDSLQQATGDELVRQLEIALLVEPILRSPDEGYASAYTSRLKLLTTARAIDDLKSRLQRTNPLQDKDAYDAMFMKLLDLETSRKKLSQASLGLTE
>NZ_LT576042.1|WP_171035487.1|1243204_1244023_+|hypothetical-protein
MDATQIASISPRLDAADERELARLIEAGVFAGHALEQDQSPCGASAEELRQVVAHGELAWQKFFEGNISLVRCVVARWVPVTHPDSEDLVHEGCMGLVEAIMRFDHALGWRFSTLAWYLVSQQVAIAAVGNRSCGSGTVAHARRVARIERARSRASASRGAPVSDREVADLVGRSVEAVRRDLGQARRVEADQDILEQTIPDERPVHDVSFLSELADQERRVLELNFGIRNGRAQTLVQIAEHMGMSVSAVSRLKQRALRRGRALVHAEIAA
>NZ_LT576042.1|WP_013161101.1|1244120_1244669_+|hypothetical-protein
MASSRDTHAGPGREQLKALSTVLGHRPSVLATASGPTGTCLATPEAFCVLTTEVPTSDAGQSGRGTWQVIGWENIQNGDWDNATKTLSWLLLDGTVGQIAVTTTDRLPGVFRERVRASILVEDTSEVSEGKGSVLIAGRRNPVADGPITWTAQPLKRTNMADPEVREHIVRRTAELRDEYEL
>NZ_LT576042.1|WP_048769897.1|1244999_1246214_-|pyrophosphate--fructose-6-phosphate-1-phosphotransferase
MVKKVALLTAGGFAPCLSSAIAELIKRYTEVSPETTLIGYRYGYEGLLKGDSLEFSPAVRAHYDRLFSFGGSPIGNSRVKLTNVKDLVARGLVASGDDPLKVAADQLIADGVDVLHTIGGDDTNTTAADLAAYLAQHDYPLTVVGLPKTIDNDIVPIRQSLGAWTAADEGARFAANVIAEHNAAPRELIIHEIMGRNCGYLAAETSRRYVAWLDAQQWLPEAGLDRRGWDIHALYVPEATIDLDAEAERLRTVMDEVGSVNIFISEGAGVPDIVAQMQATGQEVPTDAFGHVQLDKINPGAWFAKQFAERIGAGKTMVQKSGYFSRSAKSNAQDLELIAATATMAVDAALAGTPGVVGQDEEAGDKLSVIDFKRIAGHKPFDITLDWCTQLLARIGQPAPIAAA
>NZ_LT576042.1|WP_013161099.1|1246437_1246860_+|hypothetical-protein
MNHPRREVRPRPDDERGASVSVLIAACIPAFILICGLAVDGAHQVSAQRAATVTAAQAARVGSDSAATGRLNGLDARQEAMRAAREHVGTQPGMACTVGIDANDRVHVEVSTRADTAFLSIVGINHLNARGAATAELRPV
>NZ_LT576042.1|WP_013161098.1|1246928_1247546_+|threonylcarbamoyl-AMP-synthase
MARYYPVHPENPQARSIHQVADLLREGAVIAYPTDSGFALGTLFGNKEGIDTMRRIRDLDERHHLSVVVSEFAQLGRYVDMDNREFRAIKASTPGPFTFILRATREVPRSMQHPNKTVGVRVPDHVTALALLDELDEPLVSSTLILPGQEEPMSEGWQIKEALDNDIAAVLDSGDVGHVPTTVVDLTGEEPVVVRRGGGKTELFD

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Crispr_ID: NZ_LT576042_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_2

1857866-1857964

Orphan

Consensus_repeat	Method
GGTCAGCCCAACAAGCTGACCCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT576042_2

>merge|NZ_LT576042|2|1857866-1857964|CRISPRCasFinder
GGTCAGCTCAAGGAGCTGACCCACGGGGTCTGCAACGGGGTCAGCCCAACAAGCTGACCCACTGGATCCACCACAGGTCAGCCCAACAAGCTGACCCAC

>NZ_LT576042|2|2|1857866-1857964|CRISPRCasFinder
GGTCAGCTCAAGGAGCTGACCCAC	GGGGTCTGCAACGGGGTCAGCCCAACAAGCTGACCCACTGGATCCACCACA
GGTCAGCCCAACAAGCTGACCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_097775910.1\|1853435_1854191_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226963
NZ_LT576042.1\|WP_013160594.1\|1854187_1855228_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226964
NZ_LT576042.1\|WP_097775908.1\|1845626_1847180_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	unknown	unknown	gnl\|CDD\|234854
NZ_LT576042.1\|WP_036939559.1\|1855298_1856255_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	unknown	unknown	gnl\|CDD\|226965
NZ_LT576042.1\|WP_036939900.1\|1858815_1860009_-\|ATP-binding-protein	unknown	unknown	gnl\|CDD\|226951
NZ_LT576042.1\|WP_013160586.1\|1861982_1862870_-\|DUF1963-domain-containing-protein	unknown	unknown	gnl\|CDD\|370378
NZ_LT576042.1\|WP_013160601.1\|1844692_1845553_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	unknown	unknown	gnl\|CDD\|237637
NZ_LT576042.1\|WP_013160588.1\|1860355_1860691_+\|PspC-domain-containing-protein	unknown	unknown	gnl\|CDD\|377200
NZ_LT576042.1\|WP_036939569.1\|1868686_1869667_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380532
NZ_LT576042.1\|WP_013160602.1\|1844363_1844687_-\|DUF3017-domain-containing-protein	unknown	unknown	gnl\|CDD\|378602
NZ_LT576042.1\|WP_013160584.1\|1864936_1865965_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|183235
NZ_LT576042.1\|WP_048768961.1\|1867016_1868549_-\|sugar-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224053
NZ_LT576042.1\|WP_048768960.1\|1865961_1867020_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224093
NZ_LT576042.1\|WP_048769035.1\|1860990_1861932_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176205
NZ_LT576042.1\|WP_048768957.1\|1863074_1864628_-\|glutamine-hydrolyzing-GMP-synthase	unknown	unknown	gnl\|CDD\|234614
NZ_LT576042.1\|WP_097775909.1\|1849495_1851973_-\|DNA-helicase-PcrA	unknown	unknown	gnl\|CDD\|273429
NZ_LT576042.1\|WP_080516059.1\|1847301_1848150_-\|phosphoribosylglycinamide-formyltransferase	unknown	unknown	gnl\|CDD\|235544
NZ_LT576042.1\|WP_013160596.1\|1852109_1853363_+\|cardiolipin-synthase-B	unknown	unknown	gnl\|CDD\|224419
NZ_LT576042.1\|WP_013160590.1\|1858120_1858819_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LT576042.1\|WP_048768951.1\|1856326_1857343_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226966

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_097775910.1\|1853435_1854191_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226963	COG4604, CeuD, ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism].	5.15472e-140
NZ_LT576042.1\|WP_013160594.1\|1854187_1855228_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226964	COG4605, CeuC, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	1.00184e-95
NZ_LT576042.1\|WP_097775908.1\|1845626_1847180_-\|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase	gnl\|CDD\|234854	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional.	0
NZ_LT576042.1\|WP_036939559.1\|1855298_1856255_-\|iron-chelate-uptake-ABC-transporter-family-permease-subunit	gnl\|CDD\|226965	COG4606, CeuB, ABC-type enterochelin transport system, permease component [Inorganic ion transport and metabolism].	2.63507e-123
NZ_LT576042.1\|WP_036939900.1\|1858815_1860009_-\|ATP-binding-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.63584e-25
NZ_LT576042.1\|WP_013160586.1\|1861982_1862870_-\|DUF1963-domain-containing-protein	gnl\|CDD\|370378	pfam09234, DUF1963, Domain of unknown function (DUF1963). This domain is found in a set of hypothetical bacterial proteins. Its exact function has not, as yet, been described.	2.43747e-44
NZ_LT576042.1\|WP_013160601.1\|1844692_1845553_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase	gnl\|CDD\|237637	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional.	3.49323e-163
NZ_LT576042.1\|WP_013160588.1\|1860355_1860691_+\|PspC-domain-containing-protein	gnl\|CDD\|377200	pfam04024, PspC, PspC domain. This family includes Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.	7.54301e-21
NZ_LT576042.1\|WP_036939569.1\|1868686_1869667_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380532	cd06309, PBP1_galactofuranose_YtfQ-like, periplasmic binding domain of ABC-type galactofuranose YtfQ-like transport systems. Periplasmic binding domain of ABC-type YtfQ-like transport systems. The YtfQ protein from Escherichia coli is up-regulated under glucose-limited conditions and shares homology with a family of pentose/hexose sugar-binding proteins of the type 1 periplasmic binding protein superfamily. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their ligand specificity is not determined experimentally.	3.26283e-102
NZ_LT576042.1\|WP_013160602.1\|1844363_1844687_-\|DUF3017-domain-containing-protein	gnl\|CDD\|378602	pfam11222, DUF3017, Protein of unknown function (DUF3017). This bacterial family of proteins with unknown function appear to be restricted to Actinobacteria.	2.63412e-16
NZ_LT576042.1\|WP_013160584.1\|1864936_1865965_-\|sugar-ABC-transporter-permease	gnl\|CDD\|183235	PRK11618, PRK11618, inner membrane ABC transporter permease protein YjfF; Provisional.	1.75529e-91
NZ_LT576042.1\|WP_048768961.1\|1867016_1868549_-\|sugar-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224053	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism].	0
NZ_LT576042.1\|WP_048768960.1\|1865961_1867020_-\|ABC-transporter-permease	gnl\|CDD\|224093	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism].	5.04895e-61
NZ_LT576042.1\|WP_048769035.1\|1860990_1861932_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176205	cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	8.52421e-126
NZ_LT576042.1\|WP_048768957.1\|1863074_1864628_-\|glutamine-hydrolyzing-GMP-synthase	gnl\|CDD\|234614	PRK00074, guaA, GMP synthase; Reviewed.	0
NZ_LT576042.1\|WP_097775909.1\|1849495_1851973_-\|DNA-helicase-PcrA	gnl\|CDD\|273429	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA. Designed to identify pcrA members of the uvrD/rep subfamily. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_LT576042.1\|WP_080516059.1\|1847301_1848150_-\|phosphoribosylglycinamide-formyltransferase	gnl\|CDD\|235544	PRK05647, purN, phosphoribosylglycinamide formyltransferase; Reviewed.	1.18551e-90
NZ_LT576042.1\|WP_013160596.1\|1852109_1853363_+\|cardiolipin-synthase-B	gnl\|CDD\|224419	COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism].	7.67668e-76
NZ_LT576042.1\|WP_013160590.1\|1858120_1858819_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	1.02291e-65
NZ_LT576042.1\|WP_048768951.1\|1856326_1857343_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|226966	COG4607, CeuA, ABC-type enterochelin transport system, periplasmic component [Inorganic ion transport and metabolism].	2.09375e-73

>NZ_LT576042.1|WP_048768951.1|1856326_1857343_-|ABC-transporter-substrate-binding-protein
MSSTRFTNRGTLAVVALSAALLAGGLTACSSGAGSDTSPATHSAAALSSIEITDNNGTHTVTTPPQSVVALDNRTFETLSQWGVGLKAAAVSLMPSTISYTTDKSIVDIGNHREPNLEAIVAAKPDLVINGQRFTQYTDEIKSLVPDTTILDLDPRDGEPFDQELKRQTTVLGEVFGKQAEAKKLNDDLDGAIARVKKAYKPADTVMAVNTSGGEIGFIAPHVGRALGPVYDFAGLTPALQVQGSSKDHKGDDISVEAIASSNPTWILVMDRDAAISADDPSYKPASELLKNSQALAGVTAVKEGNIVTMPADIYTNESSQTYTEFLNDFAAALESRA
>NZ_LT576042.1|WP_036939559.1|1855298_1856255_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MPDRKLLDPKLLVGIVVVAGLLVLSLTTGVYDVFGASDGSRMFQITRVPRTVALVLAGAAMAMSGLVMQLLTQNRFVEPTTTGTTEWAGLGLLLVMVIAPNASIGTKMAVAVVAAFLGTMVFFAFLRTVTLRSSLIVPIVGIMLGAVVSSISTFIAIRMDALQSLGVWFAGSFTSILRGQYEILWVVAAVGVAIFLVADRFTVAGLGKSVATGVGMNYERIILMGTGLVAVATGVVTVVVGNLPFVGLIVPNIVSLARGDDLRSNLPWVCLLGIGLVTVCDLLGRVIIMPFEIPVSLILGIVGSVVFVVLLLRQRRRG
>NZ_LT576042.1|WP_013160594.1|1854187_1855228_-|iron-chelate-uptake-ABC-transporter-family-permease-subunit
MVVDTPTRETPPVRTHTGAFATRAARRRYLVVVVGLAVAAVAASFGLLAWANPMPVGSRGFWKIAQRRLASLVVIAVVAFSQALATVAFQTITNNRIITPSIMGFESLYRAVQTSAVYFLGVAGVVALQGVPQFLIQVAVMVALAVALYGTLLSGRHANLQVMLLIGIVIGAGLGSVATFMQRMLSPSEFDVLSARMFGNISNAEASYLPVAVPLCLAAGLGLWVRSQRLNVMALGASAATGLGLNHRRETMLGLTLVSVLIAVSTALVGPMTFFGFLVATLTYSLAGTHDHRRIFPVAVLTGFVVLAGAYFVMRYVFYAQGMVSVIIELVGGTTFLIVLLRKGRL
>NZ_LT576042.1|WP_097775910.1|1853435_1854191_-|ATP-binding-cassette-domain-containing-protein
MIALADVLKKYSPEVCIGPVDLHIPDGGITALVGPNGAGKSTLLTMIGRLLGLDAGVIEIAGYDVARTKSADLARVVSVLQQENHFVTRLTVRQLVGFGRFPYTHGRLSAADEELVDQALDFLALRDLEARYLDELSGGQRQRAYVAMVLAQDTEYVLLDEPLNNLDMRHSVQMMRHLHRAARELGRTIVIVLHDINFAGRYADHICAMKDGRVAAFGPSDEIMDSAVLTEVFDTPVDVVQGPHGPLAVYY
>NZ_LT576042.1|WP_013160596.1|1852109_1853363_+|cardiolipin-synthase-B
MRLPPATGRVVRNALLGILGAQLGAAGVLVAADNVRKHRAGPARFPRSAVTQARADDDLVSVYSYGEDLYNDMLTAIRRAKHTIFFETFIWKNDPIGQDFKQALIEAANRGVAVYIVYDQFANMVVRPSFFRFPDNIHVKRHPLVQSVAFWNLRNSGRDHRKILVVDSRVAFMGGYNIGSRYARTWRDTHARFEGPSVADFENAFVDYWNLRPVHLLSSQRSSMPELPDTSQRRWDGSVRLSRNTPRWAVFPIRNMYLEAIDKAQRNIWLTSAYLIPDDDLRTALARAAQRGVDVRIIVPAQSNHVIADWLSRGYYTGLLRDGIRLFLFHNAMVHAKTATIDGHWSTIGTANIDRLSLAGNYEVNAEITSPQVATALERIFLTDQSNCTEMDLARWERRSIVAKGTEWLLAPWRPLF
>NZ_LT576042.1|WP_097775909.1|1849495_1851973_-|DNA-helicase-PcrA
MTDQTPPDLFSAFDQRLSALGAPGSGEGFAPHTPHDAHDDAEALLHGLNPPQEQAVVHEGSPVLVVAGAGSGKTRVLTRRIAWLIAQRGVHPGSILAITFTNKAAADMRSRVAELVGPRTRTMWVSTFHSACVRILRTELAEAPELGLRRNFSIYDDTDTKRLMTLVLRDQNLDTKKFPPRTVMGWISNAKNELLGPGAAAEQADNGNEELYAQAYEEYQRRLRVANAMDFDDLIMITVQLLHDHPDIREKYRRRFRQVLVDEYQDTNHAQYLLIRELCAPNEDQIDAPRVDPPELLVVGDSDQSIYAFRGADVRNILDFEQDFPGARTILLEQNYRSTQTILSAANAVIQHNSGRPVKKLWSDAGDGDKIIGWVADTEHDEARWVAEKIDELHDHQQAAYSDAAVFYRTNAQSRAFEEVFIRLGLPYRVVGGVRFYERREVRDALAYLRAIANPADDVSIRRIINVPKRAIGARAETALEMFAVSQSIPFSQAVDRAAEVPGLATRSRHQVESFASMMAGFRGLVAAGSSADEVVAAVLKDSGLLDELKDSKDPQDETRVENLVELVAVAQEFVAQAHTLDLSAGQRPDAPGDQDAPELVAGMPEADDSLGAFLERIALVADSDQIPDSDPDSAGVVTLMTLHTAKGLEFDNVFLTGMEDGIFPHMRALADPAELSEERRLAYVGITRARRRLFMSRAAVRTVWGQPQYNPPSRFLEEIPAELIDWQRTGADLTSWGSSASARTASARRQTSTGGPVFGSGHGDLPRTKTVASLEPGDRVLHSSFGMGTVVAAAGSGNNATADVDFGSAGVKRLALRFAPLEKL
>NZ_LT576042.1|WP_080516059.1|1847301_1848150_-|phosphoribosylglycinamide-formyltransferase
MCSSSSHVAALPHRALLPNRQAPARSVRRCVPCCVVAGRRRCPRRPGPTTTTPPTRHRPPIPAAGQRTRCTATKGRLPGVAYRVVVLVSGSGTLLQALLDAQAAGALDARIVAVGSDQPGCRALARAQDAGVDTFVVPMTTLLPRGSAARQAWDEEFARAVDACSPDLIVLAGFMKLLGEPFMRRFAGRVINTHPAMLPAFPGAHAVRDALTAGATTTGSSIFWVDDGVDTGSLIVQEPVPVHPGDDEDTLHERIKVTERRLLVATVNELARRAPAGDPTSV
>NZ_LT576042.1|WP_097775908.1|1845626_1847180_-|bifunctional-phosphoribosylaminoimidazolecarboxamide-formyltransferase/IMP-cyclohydrolase
MTDPTRAPIRRALVSVYDKTGLEELGRALAAAGVEIVSTGSTARKLSEAGVEVVPVEQVTGFPETLDGRVKTLHPAVHAGILADRRLESHRRQLDELGIKPFDLVVSNLYPFSQTVASGADFDECVEQIDIGGPSMVRAAAKNHPSVAIITSPDQYSQLTDALPQGGFTLAERRVLAAKAFAHTAAYDASVASWFAEQTTDEGLPGFIGQAATKLHDLRYGENSHQRAAVYAAEGAAPGLVGAEQLGGKEMSYNNYTDADAARRAAYDFSGPAVAIIKHANPCGIAVGSDIADAHAKAHACDPVSAYGGVIAANQIVTLAMAQQVKPIFTEVIVAPDFEPAALELLQTKKNLRILKAEDFHFDKFLWREISGGLLASDPDRLDAPGDQTSGWKLVAGPAADAAMLSDLLFAWKACRSVKSNAILLAHDGASVGVGMGQVNRVDSCRLAVSRAGDRAKGSVAASDAFFPFSDGPQILLDAGVSAIVQPGGSIRDEETIEAASKAGVTMYFTGNRHFFH
>NZ_LT576042.1|WP_013160601.1|1844692_1845553_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase
MTAQRLDGKAVAAQIKIELKQRVDALREQGVIPGLGTVLVGDDPASQIYVNGKHRDCEQVGIESYRVDLPADATPEQVERSIRVLNDSTMCTGYIVQLPLPPQIDPNWALELIDPDKDADGLTSDNLGKLVLGRSGVLPCTPRGIVELLRRYEIPLDGAKVCVVGRGTTVGRPLGLLLTRRDVNATVTLCHTGTKNLAEETRQADIVIGAAGHPGLVTASMLKPGAVVVDVGVRRIEGKPVGDFTADVWDVASYVTPNPGGVGPMTRAMLLVNVVERAEQIAAQEQ
>NZ_LT576042.1|WP_013160602.1|1844363_1844687_-|DUF3017-domain-containing-protein
MTPAPPSSTKQPVAAPLKLDRLRAQWPLLLCLAFFVAGMAVTAAAHWRRGAVLMGAGLGLAGVLRLFLPPRLAGLLVVRRRWFDVLVGIVGGTTMCVLAILVPPLER
>NZ_LT576042.1|WP_013160590.1|1858120_1858819_-|response-regulator-transcription-factor
MTSLPGPLTTDEPRPEGPRRVVLVDDHDIFRAGVRHELTAAAPDEIDVVGEAGDVEQAVKVITGTTPDVVLLDVHLPGGGGAEVVRQVHQIDPKITFLALSVSDAAEDVIAVIRAGARGYVTKSISTADLVEAIGRVATGDAVFSPRLAGFVLDAFSGSISVESIDEDLDRLSQREREVMKLIARGYTYKEVARELFISIKTVETHVSNVLRKLQLSNRHELTKWATDRKLV
>NZ_LT576042.1|WP_036939900.1|1858815_1860009_-|ATP-binding-protein
MRGSWLGGVCTGIADYLGSPVWPVRLCFVLLAMTAYLGVVAYAALWAFLPIKDEAAEQARAVRPARKPRSSRRQDLEVWLSIGLVLLLCLGLLVLSRLFGLGSIHAFFWPVVLAAVGIGLVWRQADQPEEEPDRLVPRWMAPLVSSSKWATVLRMGLGMTLVGASVLLVAYTQVDGPYLPAVLGMVALALAGFGVLTAPWMNRMRSNLARAHEEKLVADARADMAAHLHDSVLQTLALIQRQADDPKAVASLARRQERELREWLYGEAPGPRDFRAALRDAGAQVEDSSGVRVEVICVGDATLNDGLSAMILAAREAMMNSAKHSGADHIDVYAEVDDDHVELFVRDRGVGFDAEQIRADRMGVRRSIIERMERHGGTAQVRSAPGEGTEVKLEIAR
>NZ_LT576042.1|WP_013160588.1|1860355_1860691_+|PspC-domain-containing-protein
MRTAGAVQTPIQEEPMGTKQLVRRHDNRWIAGVAGGLADYWGIDALAVRLGFIILGLVTFGTAFWAYLICWLLIPDGVDGSKGLDAVKRTINGFRDKNDGPQDFNPYDDTK
>NZ_LT576042.1|WP_048769035.1|1860990_1861932_+|zinc-binding-dehydrogenase
MLAMVLDHPGGADTFRPEERPIPEATATHSVLEVMAFGVNHADLITRAGGSPDVRFPRVIGIEAVGRVHATSPASGLEVGQRVVTLMGGVGRDFDGSYQEYALVPNSQLYPVGIEMAWNRLATIPESFYTALGSLDRMHLTAGDALLIRGGTSSVGLAAMQLAKSFGVRVTSTTRSPGKIARLEALGADEVLVDAGTLPGTERFDGVLELVGAATLDDSMGHAAPRGCVVVTGGLGGQWTVPDFDPFSIRGYLTNFQSTEVNPALLRHMLTLVAQQGLSLPIVGEFPLPDVGRAHEALETSTEMGKIVVSVAH
>NZ_LT576042.1|WP_013160586.1|1861982_1862870_-|DUF1963-domain-containing-protein
MSQDLKQALFGVFDAVQKNAIKLDFGADPEPGEAGQSRLGGRPDVPRDFEWPRFQDKDDDSADANRPLTFLAQVNLADATRYDTEGLLPTAGVLSFFYEMETQEWGFDPRDKGSARVFFFEDPATLRPASVPDDLDDWFPDGQAISYRNMVDLPAWLGFTELPEEVRRTNPLPVPLTDIEWEDYDAMREEYGAPSEGDDAVTTKLLGHPDVVQNPMEAECEMVTRGMADGAEGEEISQELRDDIEKASRDWTLLFQMGTDSGLEFGDVGHINYWIKKQDLARRDFDKAWLILQCG
>NZ_LT576042.1|WP_048768957.1|1863074_1864628_-|glutamine-hydrolyzing-GMP-synthase
MPASHDLVLVVDYGAQYAQLIARRVREAHVYSEIVPHAMSVDEMVAKKPTAIILSGGPASVYVPDAPKVDPALFSTGIPVFGICYGFQLMAGALGGTVEHTGTSEYGRTSVAIDDTGVLLHDLDDISSVWMSHGDSVTAAPAGFASLAHTAGAPIAAFEAPERKLAGVQWHPEVAHTERGQEVIEHFLFDFAGCKPTWTSSSIVDDQVSRIRAQVGDKRVLCALSGGVDSAVAAALVQRAIGDQLTCCFIDHGLLRKGEAEQVKHDFVQITGVDLVVADESERFLSALAGVSEPEAKRKIIGREFIRSFEDVARQIAGDKGIDFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPDDLQFTLIEPLRALFKDEVRAVGAELGLPDSMVWRQPFPGPGLGIRIVGEITQDRLDLLREADAIAREELTAAGLDREVWQMPVVLLADVHSVGVQGDGRTYGHPIVLRPVSSEDAMTADWSRLPYDLLEKISTRITNQCPEVNRVVLDVTSKPPATIEWE
>NZ_LT576042.1|WP_013160584.1|1864936_1865965_-|sugar-ABC-transporter-permease
MSAQTLNAAVPTRALPSWLKIDRKRIPTLASVVIFLIMIIYGQAAYGQTLTMSTASNLLINNAHLIILAVGMTFVILTGGIDLSVGAVIAFSSVLGAQLLNAGWNPVLVMGIIVVVGGLFGLASGVLVQYFRVQPFIATLAMMFLARGLASILSTTPIRLDDASGFRTLATQWKVIDGPKVNDLVITPNVLIAVVVVVAGFFILHRTRTGRTVYAIGGSEPSAELMGLPVNRTKYLIYVISGLCAGIASVVYTSKLGMAQNVTGVGWELDAIAAVVIGGTLLLGGAGYVLGSVLGALVLGLMNVLIARDGSIPPEATTIITGAILLLFVLLQRAVVKRDHND
>NZ_LT576042.1|WP_048768960.1|1865961_1867020_-|ABC-transporter-permease
MKAIVKNQYFWGIIALLLLIMVDVIKDPSFVRITVNNGNLYGSLIDILRGSAPVLMIAIGMTLVIATAGIDLSVGSLMAVSGAVSMEFLASAAHSGSTGAVLTALGLSLLVTVLLGAINGLLVSVVGLQPFITTLIMMMTGRGIAKVITGGQNTSARSDGFAWISTGTVFGFPVAFVIAIAIVALVALVVRRSALGMTIESVGINQRASRMAGIKPLYILFSVYVISGLLAGMAGVFATANVMTVEVSKTGMDMEMDAILAVVIGGTSLAGGRFSLGGSAIGALLITTLNRTVTFLNVPSAATPAFKAAVIIIVCLLQSERVRNLFKTLKRSRRVVEAAPARVEEVKEVVAA
>NZ_LT576042.1|WP_048768961.1|1867016_1868549_-|sugar-ABC-transporter-ATP-binding-protein
MTEPTARIVEMRGISIEFPGVKALQDVDLTLYQGEVHALMGENGAGKSTLIKALTGVYSIDSGSITIAGRKRTLNGTADAQRAGVATVYQEVNLCTNLTIGENLMLGHEAHGPLGINWKKTYQLAKQALARFGLDHLDPRAPLSDLSIAMQQLVAVSRAMVIDAKVLILDEPTSSLDAHEVETLFSVMRRLRDQGVAILFVSHFLDQVYEISDRMTILRNGQFIGSYRTRELDRTTLISKMIGKDYSSLSTIAREADEVAGTEARTPFIKVLGLGRKGSIEAVDLDLFAGEIIGFAGLLGSGRTELARLLYGADKPESGQIAIDGKDVSIGSPATALKDRIAYSTENRRDEGIIADLTVRENIILALQARRGWIRPIPRREQDAIAKKYIEALNVRPPDPEKLIKNLSGGNQQKVLLARWLATEPRLLILDEPTRGIDVGAKSEIQEAVVKLASEGMSVIFISSELEEVVRLSQRILVLKDNRAIETITNGPDVSANTIVDIIAKDGQAA
>NZ_LT576042.1|WP_036939569.1|1868686_1869667_-|ABC-transporter-substrate-binding-protein
MRKLLKLIAALGAFALALTGCSGGGSGSDSGSSSKTLTVGFVAVGPEGGWRTANKTNIQNTFSKDNGINLKYAPSDNGDQASQITAMTSFIDEGVDAILLSATEATGWENVLNRAKEAEIPVFLLDRGIEPDNTSLYASRIAPDNVAISESAANWAVKQFPEGAKYVVLEGPAGLSVVNDRNKGWDSVMSTHPEFQKIASQSANWSQNDGKSVTETLLKANPGIQLIFAQNDEMGLGATQAVTEAGLTPGKDVKIITIDGTKAALESLSAGQLSFVAEYNPLFGDIALNAVKKAKAGEHVDALYTVDSVTFDSPEAAKAALPNRAY

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Crispr_ID: NZ_LT576042_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_3

2046842-2046950

Orphan

Consensus_repeat	Method
CCCGGGTCGGCGTCGAACTCCCGGCAACCCCGGACG	CRISPRCasFinder

1 spacers

csa3

The CRISPR arrays of NZ_LT576042_3

>merge|NZ_LT576042|3|2046842-2046950|CRISPRCasFinder
CCCGGGTCGGCGTCGAACTCCCGGCAACCCCGGACGGGTGAGCTACCACGCCAGCCGCCTGGCCTGGGCGCCGCCCGGGTCGGCGTCGAACTCCCGGCAACCCCGGACG

>NZ_LT576042|3|3|2046842-2046950|CRISPRCasFinder
CCCGGGTCGGCGTCGAACTCCCGGCAACCCCGGACG	GGTGAGCTACCACGCCAGCCGCCTGGCCTGGGCGCCG
CCCGGGTCGGCGTCGAACTCCCGGCAACCCCGGACG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_044657731.1\|2035554_2037144_+\|patatin-like-phospholipase-family-protein	unknown	unknown	gnl\|CDD\|366777
NZ_LT576042.1\|WP_055345563.1\|2044020_2045892_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|225127
NZ_LT576042.1\|WP_055345910.1\|2058132_2058402_+\|ACT-domain-containing-protein	unknown	unknown	gnl\|CDD\|178923
NZ_LT576042.1\|WP_013160409.1\|2048924_2049731_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378925
NZ_LT576042.1\|WP_013160419.1\|2038575_2039658_+\|transaldolase	unknown	unknown	gnl\|CDD\|235117
NZ_LT576042.1\|WP_013160421.1\|2037249_2037597_+\|PRC-barrel-domain-containing-protein	unknown	unknown	gnl\|CDD\|368352
NZ_LT576042.1\|WP_044635984.1\|2055381_2056899_-\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236113
NZ_LT576042.1\|WP_044635983.1\|2058405_2059755_+\|PFL-family-protein	unknown	unknown	gnl\|CDD\|180009
NZ_LT576042.1\|WP_055343640.1\|2054323_2055385_-\|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl\|CDD\|235439
NZ_LT576042.1\|WP_013160406.1\|2053859_2054090_-\|DUF3073-domain-containing-protein	unknown	unknown	gnl\|CDD\|378620
NZ_LT576042.1\|WP_013160411.1\|2046952_2047720_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_LT576042.1\|WP_041704078.1\|2037717_2038377_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_112317808.1\|2041760_2042654_+\|2-dehydropantoate-2-reductase	unknown	unknown	gnl\|CDD\|235821
NZ_LT576042.1\|WP_048734041.1\|2039966_2040350_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_013160413.1\|2045888_2046314_-\|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl\|CDD\|197713
NZ_LT576042.1\|WP_162786085.1\|2050197_2051889_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|223862
NZ_LT576042.1\|WP_097775934.1\|2052525_2053608_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|225176
NZ_LT576042.1\|WP_052809087.1\|2042716_2043883_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|180937
NZ_LT576042.1\|WP_048769971.1\|2057023_2057863_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236776
NZ_LT576042.1\|WP_172952189.1\|2040666_2041692_+\|zinc-binding-dehydrogenase	unknown	unknown	gnl\|CDD\|176247

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_044657731.1\|2035554_2037144_+\|patatin-like-phospholipase-family-protein	gnl\|CDD\|366777	pfam01734, Patatin, Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.	2.38063e-16
NZ_LT576042.1\|WP_055345563.1\|2044020_2045892_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|225127	COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_LT576042.1\|WP_055345910.1\|2058132_2058402_+\|ACT-domain-containing-protein	gnl\|CDD\|178923	PRK00194, PRK00194, ACT domain-containing protein.	2.24183e-35
NZ_LT576042.1\|WP_013160419.1\|2038575_2039658_+\|transaldolase	gnl\|CDD\|235117	PRK03343, PRK03343, transaldolase; Validated.	0
NZ_LT576042.1\|WP_013160409.1\|2048924_2049731_+\|ABC-transporter-permease	gnl\|CDD\|378925	pfam12698, ABC2_membrane_3, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	1.61305e-08
NZ_LT576042.1\|WP_013160421.1\|2037249_2037597_+\|PRC-barrel-domain-containing-protein	gnl\|CDD\|368352	pfam05239, PRC, PRC-barrel domain. The PRC-barrel is an all beta barrel domain found in photosystem reaction centre subunit H of the purple bacteria and RNA metabolism proteins of the RimM group. PRC-barrels are approximately 80 residues long, and found widely represented in bacteria, archaea and plants. This domain is also present at the carboxyl terminus of the pan-bacterial protein RimM, which is involved in ribosomal maturation and processing of 16S rRNA. A family of small proteins conserved in all known euryarchaea are composed entirely of a single stand-alone copy of the domain.	0.00136399
NZ_LT576042.1\|WP_044635984.1\|2055381_2056899_-\|amidophosphoribosyltransferase	gnl\|CDD\|236113	PRK07847, PRK07847, amidophosphoribosyltransferase; Provisional.	0
NZ_LT576042.1\|WP_044635983.1\|2058405_2059755_+\|PFL-family-protein	gnl\|CDD\|180009	PRK05313, PRK05313, hypothetical protein; Provisional.	0
NZ_LT576042.1\|WP_055343640.1\|2054323_2055385_-\|phosphoribosylformylglycinamidine-cyclo-ligase	gnl\|CDD\|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	1.50974e-174
NZ_LT576042.1\|WP_013160406.1\|2053859_2054090_-\|DUF3073-domain-containing-protein	gnl\|CDD\|378620	pfam11273, DUF3073, Protein of unknown function (DUF3073). This family of proteins with unknown function appears to be restricted to Actinobacteria.	5.81755e-19
NZ_LT576042.1\|WP_013160411.1\|2046952_2047720_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	8.21356e-16
NZ_LT576042.1\|WP_112317808.1\|2041760_2042654_+\|2-dehydropantoate-2-reductase	gnl\|CDD\|235821	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed.	2.12416e-57
NZ_LT576042.1\|WP_013160413.1\|2045888_2046314_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	6.39099e-19
NZ_LT576042.1\|WP_162786085.1\|2050197_2051889_+\|SH3-domain-containing-protein	gnl\|CDD\|223862	COG0791, Spr, Cell wall-associated hydrolases (invasion-associated proteins) [Cell envelope biogenesis, outer membrane].	8.2851e-28
NZ_LT576042.1\|WP_097775934.1\|2052525_2053608_-\|alpha/beta-hydrolase	gnl\|CDD\|225176	COG2267, PldB, Lysophospholipase [Lipid metabolism].	5.84883e-23
NZ_LT576042.1\|WP_052809087.1\|2042716_2043883_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|180937	PRK07337, PRK07337, pyridoxal phosphate-dependent aminotransferase.	3.95794e-161
NZ_LT576042.1\|WP_048769971.1\|2057023_2057863_-\|hypothetical-protein	gnl\|CDD\|236776	PRK10856, PRK10856, cytoskeleton protein RodZ.	2.31267e-05
NZ_LT576042.1\|WP_172952189.1\|2040666_2041692_+\|zinc-binding-dehydrogenase	gnl\|CDD\|176247	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	0

>NZ_LT576042.1|WP_013160413.1|2045888_2046314_-|helix-turn-helix-transcriptional-regulator
MREDTKACTFNVESQYVDLAAEVFSLLSDATRIRIILALRDGELSVGDLADRVRKSPTAVSQHLAKLRWGKIVQARQEGTRVFYSLIDEHARKLVAQAVFQAEHVVGGVPPHHLNGEGVPAAPAAPDATETASATDPGQRA
>NZ_LT576042.1|WP_055345563.1|2044020_2045892_-|cadmium-translocating-P-type-ATPase
MTTVTGSTSRTTIRQQAGTSLWSRIDRTDLARTLFVAACTAALALGLDWPSPTVPLLAVIGLVVGCWPVVVEAWHDIRQRRMSMELSMLLAIIAAGVIGEWTTSLLITTFVLAAEILEDLSMDRGRDALTALMSFLPTTVTLREGHTTRDIALDDVAPGQVLVIGPGERVPVDGVVDKGRSTLDQSRITGESMPVDVAVGDPVYAGSINQVGALEVRAERVGANSSYGRIVTAVREAQSSRAPVQRMADRFAAWLVYLSIAGAIVTFLVTRDLSATISVIIVAGACGIAAGTPLAVLAAIARIARVGAFVKDGAHLEALSVVDTVVFDKTGTLTRGVPTVTDVRTAPGVSTQQLLAWAGAAEAYSEHPLGRAIAAHVRAAGVAPGTAQSFDYQPGRGVSVEVDGRMIAAGNARLVPDAPASAADGVATPVHVSVDGHYAGTVLLADQVRDSARSVVAELRHRGLRVMMITGDQPATARAVADELGITEVRAGLLPDEKLRAIDAERAAGHRLAMVGDGVNDAPALMRATVGIAMGSGTDIARDSADVVLISSDLNDLAATLHIARRARRIVMFNFVGTIVVDVIGMVLAAFGLLGPVLAAVFHVGSESAFILNSARLIPGRRH
>NZ_LT576042.1|WP_052809087.1|2042716_2043883_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MTVSHRARNAETFHALDFAQRAADLEAQGHHVVKLSIGEPDFGAPPAVLAAGRDALDGRPLPYTPPLGLPELRSALSDFYRDRHGVQVPAERIAITMGASAALLLATAATTDPGDEVILADPSYPCNRELVQSFGGTVVALPTTAATRYQLDADMVERAWGDRTTSVMIASPSNPTGTSIPFDELAAICELARSRGGWRIVDEIYLELSDASPAHTVLEVDPDAIVTGSFSKYFGMTGWRLGWAVLPPQLVGPVERLAMNYFLSASNPTQQAALACFTPETLEVCERRRRELGARRRLVLEGLARIGLPVPVVPDGAFYVYIDVSGTGLGAWQFCEQALDVAHVALTPGRDFGPTTGETHVRLSYAASRGELDEGLSRLGHFLASRRG
>NZ_LT576042.1|WP_112317808.1|2041760_2042654_+|2-dehydropantoate-2-reductase
MAVASGLLRAGRAVVVCGGHAPIHRIEVTEHGTTSAWAVEHTDDPTTLGDVDTAIVAVKAQQTDSAADWLRAVARPQVTVLVAQNGVEQRERVAPYLGQPGAGASPTDAPQVVPAIVYLNVERLAPGRARVNHVGDVDLAFPVGEAARELADELTHGGLRVRLEDDFAAAAWRKLLTNISANPLTALTGRRAEVLHEPAIRQAAGQLMAEAVTVAQAAGIHLTHADATAALDWLATIPGDATTSMLSDRLAARPLEYDALTGAVVRTAARVGVEVPANKLMLALLSALPSGEGPHRR
>NZ_LT576042.1|WP_172952189.1|2040666_2041692_+|zinc-binding-dehydrogenase
MRGVIMESAGVVRVEERDDPRIIEPTDAVIRITTTCICGSDLWPYRGVVPVHHQVMGHEYLGVVEQIGSAVTTLHVGDHVVGSFCISDNTCEICRAGYQSRCVHGEFVSQHIGTQAEKARIPYADGTLVAMPGKPDADLIPSLMATSDVLGTGWFGAAAAGVGKGSSVAVVGDGAVGLMAVLAAKQLGAERIIAMSRHPERQQLAREYGATDIVEERGDAGAERIKQMTGGLGVQCAVEAVGTEQSLMQAVDATRPGGHVGFVGVAHEGVALPMDKMFAAEVHLFGGPAPVRRFLPELIQLVWDRKINPGKVFDLTLPLERAAEGYKAMDERTAIKVLLTL
>NZ_LT576042.1|WP_048734041.1|2039966_2040350_+|hypothetical-protein
MMWRRAVPVAMMGMVALTAAGSLIGTESARGESASRTAATTQQATSQGITQSIAVDACGQRAEQTIAKAAPALAVKAHDTLDTATLQRDADRWQVQIGVRIGQKQHLAHCTVTGSATSPAIANFVYW
>NZ_LT576042.1|WP_013160419.1|2038575_2039658_+|transaldolase
MNPRLKALSDAGVSIWLDDLSRARITSGGLAELIKDSSVVGVTTNPTIFAGALSNGADYAAQLTELGDVSTAEAIKQLTATDVRDACDLFAPIYQSSEGYDGRVSIEVEPGLAHDTEATTKQAAELYKLVDRDNVLIKIPATLAGLPAIEATIAAGISVNVTLIFSVERYRKVMDAYMAGLEKAAAAGKDLSKIHSVASFFISRVDSEIDKRLGALNHPELAGKAGVANGLVAFGAYQEVFASERFQKLAAKGANLQRPLWASTGTKNAAYPDTLYVSDLVARGVVNTMPEKTMQAFADHGELGEPIDGRAAEGQATLDKIAAAGVPLAEVFDQLETEGVDKFVASWAELVESVASAMKR
>NZ_LT576042.1|WP_041704078.1|2037717_2038377_+|hypothetical-protein
MTWFAVGLGLAGLILGIIAIMQARQANRAAHDTRANVNAAVQAAFSAAADAQKSHQELVARSRAAVLHDTQDNGPAFPGTQERGRFNWVMEISRDEKGLVTSLRAVSEGSHIAHDVTFIVNSDEHAERSVHFDVIRPGRPVDLRAEQTVAMHRDRVAEATKQQAANTAGIATDMPRKLGPIDTHLRLSIIAVTEDGTPQAYVIERTLRTTEHGSVLVYA
>NZ_LT576042.1|WP_013160421.1|2037249_2037597_+|PRC-barrel-domain-containing-protein
MSSTDRGYDHLYGARVIDRDGAFVGDVAQVYTDQVNGEALAVTVRTGLFGARRLLVPLINAAVGWHRIDVPYLRAHVNSAPPAGTPVRSARDAYPHLSPVTEAEIAAHYELTTLR
>NZ_LT576042.1|WP_044657731.1|2035554_2037144_+|patatin-like-phospholipase-family-protein
MSRPAWFGVLPFLGRHASTRQETPAVQGLVIAGGGARASFQIGALRYLYEREHIAPSVITATSAGAILGSLLAQSKDPAEQLASLRGIEKLWLAMTQPSDMFTERSWFTQLKSHADALDVLRQVEEKAEHDDPGHQPGLWSRFGWGTRQAAAKQEGDAKQAGATPTHQVTGGAATGAGESPDAPDAAPTSTDNALSPQERTLALAMSEEPGEPLGWTPNVFFQLAAGLPQLGRASADLTAAWRGLERNRSLFKPGPILRRLLSRDFFHSEQVTSSGMTLRCAFVGLNSGELRYMREDGHIVDRDDKVLAGNPFDISIGVLASCSIPGVFKPVEMNGEWYVDGGIRENVPVEEAVSNLGVTRPYVIVSGPSGLNYDAQVGSGDLISILFRIQSIQSDESERDEVAYARSSGAVVIEPELSVHETMEFDPGTLRINRDYGWMRAAEAVHEADAATQQVNREIIETRLQAWKRERQMKPGSPHEFDQAMLNEVGQLKLHLQSLLGSADKNLLPPDAQQWWTRSEGDDAPAAS
>NZ_LT576042.1|WP_013160411.1|2046952_2047720_-|TetR/AcrR-family-transcriptional-regulator
MAEPDEGSDIGSALSSLSAALSQLSSAVVNQTSDEINARVTDPLRRASEQITDVAERLGSGSSARPRGIEATREALLDAAAQLFAEKGYEGTGVSEIARRAGYTKGALYANFASKQELFKALIERELARSHEDLESSLTGASMPSGADREAVQRQVLLTLEANLYAIRHPQMRDEVLADTRGQLRRIAEVIARTHGEALAEGQEPAQDYLDDAMVVAAVESFAALGTMLSDDPVAAEAVTRSRDRIIGRILGSQD
>NZ_LT576042.1|WP_013160409.1|2048924_2049731_+|ABC-transporter-permease
MSTITSIRATPNSATTGTTMAPAGVARWRQFGLVFQWQLRRNLTLMPLYVVVQLVLSVATVVGYGLLIGDPAPDAARYLVTGAPTISLVMLGLAMTPQFVAQSRTEGSLDWMRALPISRPVFLLADLAVWTMVALPGLVLSIIVGALRFHLDLSMSWLIVPAALLIALTSASIGYAIANLCPPTLAQLISQVLVFVILLFSPLSYPADRLPQWGQAVHHWLPLESMGEIMRHTILSADFAAPLSAWLLLAAWCAAAVAGASWALGRRS
>NZ_LT576042.1|WP_162786085.1|2050197_2051889_+|SH3-domain-containing-protein
MAITSTLVAGSLATASLVFAPLAQADYSPLAATATVNVRQGPDTSSSVLATLSSGDTVTQRGAEQDGWLPITYNGANAWIQAQYVASTTAATQKDQISTAELTADAYVRTAANANAWVLGTAHTGDKVGITGQASGDYTPVNFYGRAGWIATKLLSAADASVTSIKITTAISSDYLWVRGGESTAAQSIGMLYPGDRVDVTGDPVGGWVPINFNGKTAFVAANYSRYLTDPTVVTLSTKTDVTNKDTATSTGTDSSTAGGSTATTPTTTAPTTTAPATKPTTTPPATTQAAASTKYTTADVNVRVGPGIDQQPVTVLKENSQVAATGKTSGDWTEVSYDGASRWISSQYLSDTKQAEAPAPAPAPDPTPAGPTGSRWTTAALNAYGSSTQPKPATTVVPEGTQVELTGKQADGRSEYTWNGTTYWSATEYLGTNAPATNTSANTAKPGANAVETAINFAMSKLGGPYVWGGTGPVGYDCSGLMQAAYAAAGVTLPRVTWDQVNAGKQVSVGDLQPGDLVFFYDNGHVGMYIGNGNIVNALNEDAGIVVTPISYMPISAAVRIA
>NZ_LT576042.1|WP_097775934.1|2052525_2053608_-|alpha/beta-hydrolase
MTAWLPDLPVTGYQAHTWVIPGARRLDNEPEGPLTATLVRRGAPRHERAVLYLHGWDDYFFQAHVADWFNAHGFDFYAVDLRRYGRNLHEGLYAGYVSDLRDYYQELDHSVELIRHDHPGVPITFMGHSTGGLVGALWASERPGLLNGMLLNSPWLDMQGSPVFWRVMAPLAGAVAAINPLMELAITDLGLYKRALHVSGEGEWNWDTDFKSNPAFVPRFGWGRAILAGQGAVAKGLHIDTPVLTLISTRSDFSRTWNDDMHGSDLVLDVRRIGAAALHLGDLVTIRRVRGAVHDVMLSRAPVREVIFDEIDRWLDAYVRPEGAGALYWQRLGRPAAAADPAVPGTPQASDGKGDVPATQ
>NZ_LT576042.1|WP_013160406.1|2053859_2054090_-|DUF3073-domain-containing-protein
MGRGRQKAKQTKVARDLKYRPVQTDFASLERELRGESAHDPDDQGHDAIPDNYLDLAKQYDPDSADAGAADDEKHR
>NZ_LT576042.1|WP_055343640.1|2054323_2055385_-|phosphoribosylformylglycinamidine-cyclo-ligase
MSDSAYARAGVDIEAGDAAVELMKAHVARTKRPEVLGGIGGFAGLFDASKLAAYRHPLLATSTDGVGTKVAIARAMGVHNTIGWDLVGMLVDDLVVCGAEPLFLTDYIACGHVVPERIAAVVEGIADACVSAGCALLGGETAEHPGLMEPDEYDIAGATTGVVEADELLGPDRVQPGDVALAMASSGLHSNGYSLVRHVLLDEGGLSLDATIPQLGRTLGEELLEPTHVYAGQVMKLLDRVSVHAMSHITGGGLAANLVRVVPQGMRVDVDRATWRPAGIFELVQATGDISQADIEATLNMGVGMVALLPPDQVDAAQRVLDELGLNSWACGQVSATPGQPATVELSGSHPLS
>NZ_LT576042.1|WP_044635984.1|2055381_2056899_-|amidophosphoribosyltransferase
MSPESQTDAEHDDVPHDECGVFGVFAPGEQVSKLVYYGLYALQHRGQESAGMAVSNGQRIMVFKDMGLVSQVFDESTLNSLRGDLAIGHTRYSTTGASVWKNAQPTFKPTPSGGLALAHNGNLTNTDELEAFARARVGVGGEVPHKSSMDSTNDTSLVTTIMASYDEPLEDVAMELLPKLVGAFSLVFMNENTLFAARDPQGVRPLVLGRLHSGWVVASETAAIDIVGGTFVREIEPGEMIAIDAAGLRSRRFAPARPKGCIFEYVYVARPDTVIAGRRIHNVRVKVGKILAREAPADADLVIPVPESGVPAAIGYAAESGIPFGMGLVKNNYVGRTFIQPSQTLRNLGIRLKLNPLRDVIEGKRLVVVDDSIVRGNTQRQLVRMLREAGAAEVHVRISSPPVEWPCFYGLDFATRAQLIAPGLTNDEICRSIGADSLSYVSLEGLIQATHVPKDNLCRACFDGIYPIEVPPGQSAEMGLDAPEAPACGGYENVEFDRINHKEAS
>NZ_LT576042.1|WP_048769971.1|2057023_2057863_-|hypothetical-protein
MSDDPTAGDPYRNDPYRGGANPYGANQYGGAYRGGQPDGSYPGYPPPGMGDTAPIPVVNEDDPDPDDKRPSRIPTILVTLFLGPFGAIAAAVSAGRAHDRGFPRATYWLSFIFTWAVHLLIITALVVAWLLGAFDGVLKSSSTPSPSSSPVASATPTPSATATPTPTTTSAAPTATSARPSASATASASATPSGVSNLADFPAGAAKMCGASIAANSATTCDFATAVADAYLRSGSFGQAATVQATSSTTGQTYTMNCNMDARAITTCTGGNGASVYMR
>NZ_LT576042.1|WP_055345910.1|2058132_2058402_+|ACT-domain-containing-protein
MIAIVTVTGLDHTGIVAAVSTRLCELGINILNITQTIMGDYFTMIMQCELDESRHGIGEVADELRRTGESTQVDVRVQSEAIFHTMHEL
>NZ_LT576042.1|WP_044635983.1|2058405_2059755_+|PFL-family-protein
MDTTHDILETIEMIEDNRLDIRTVTMGISLLDCADHDPRVAQRKIYDRITHQARDLVTTAQGIETELGIPIINKRITITPMSIVAAGSEVDDYTGFAETLDRAAKEVGVDFVGGFSALMSKSSTAADRRLLDSIPAALAATDVVCSSINIGSTKAGINMTAVARTGEVIQELAQATDGIGCSKFVVFCNAVGDNPFMAGGFHGVEEGDCCINVGVSGPGVVKRALDKVPEATWGEMSETIKKAAFKITRMGQLVGTMAAERLNVDFGIVDLSLAPTPAVGDSVAEIIETMGVGTVGGHGTTAALALLNDAVKKGGLMACSHVGGLSGSFIPVSEDAAMIDAVRSGSLSLAKLEAMTAICSVGLDMIAIPGDTPASTISGIIADEAAIGMMNNKTTAVRVIPVPGATVGDEIDFGGLMGRAPVMAVNPSSAEHLISRGGRLPAPVHSFRS

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Crispr_ID: NZ_LT576042_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_4

2192257-2196491

Unclear

Consensus_repeat	Method
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	PILER-CR
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CRISPRCasFinder
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CRT

58 spacers

cas2,cas1,csb3,cas3,csb2gr5,csb1gr7

The CRISPR arrays of NZ_LT576042_4

>merge|NZ_LT576042|4|2192257-2196491|PILER-CR,CRISPRCasFinder,CRT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGCGGACATAGACCGGCCCCATTCCGAAGCCCACAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACAGAAACGGTCTTGGTGCATGTTGCTGTCCTCTCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCTAAAACGGGACTGCTTGGCTGGTGATGATGAATATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCATGTCATCTGCCACCGCACCTGCTGGGCAATCGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGTGTTACGTGTTGAAGGGGTCCAGCCCTTCACGAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTCTCAAAGGCCGCTTTTGAGCTGACTTTTCAGGGGGCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCGCCGCCCTTCACACGGGTGGCCGGTGTGTGGTTAAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTCCACGTCCAGGCTCTGTGCCGCGAGCATTTCCAGCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGCTCGTGCGACCGCTGCGGGAAGCCCATTTTCGACGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTCACCGCGCTCTGACAAGGCCCGATACTTTCGCCCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGCGTGCAGCAGTCACTGCGCAAGTGGGGGCGTCGGGAATTGCCCCTCCTTCTGGAGGAGCCCTTCATTGAGGCCGCGAGCGAGCCAAGGCCGAGGCCGACCGCTTCACAAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTGTCGGTCATGATCCTGGTCCTTTCAGGGTCTGGGCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCTTCTCCACCCGCGGCCAGGCCATCGCCTCCATCACATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTTGTGTGGCACCGTGTCGGACACCAGCGTCCGGCAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGAGCTCTCGTCCCTGCAGCTCGACGCGCTGGTCAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGGTGCCACATCAGCCAGAAGCCCAGCAGCCGCTGCAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTCGGCGCGGGCATTGGTGACTGCACCTCCGGCCTCGATATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTCCCATGTCATCAGAGGATCCTTTGGTAGGACAGGGTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTGCCGACCAGCCCGGCGACCACGGTATTCACGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTCACCTGAAGCCCGAGGCGCTCCCGGATCCGGATCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTCTGAACCGCCGATAAGCACGGCCAGCCACCCGGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGAGCTGATCGGCAAGGTCCCGACGCCCCCACTTGCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACGCCGCCGAAGACCGCGCAATCGACATCCTCCACATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCACTCCTTCTCGATAGTTCCTTGTCCGGTCGGCCCTCATTGCGCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTTATCCGTTTCGACTGTCGCCACCGACTGCACCGGGATATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGCGTCCGGATGCCGGGGTCACCCGTCAAACCAAATTGCCCCTCCTTCTGGAGGGTCCCTTCATTGAGGCTCCCACCACGCTGGCGATCCAGCCTTCGACCATGCAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTAATCTCCTCTGTAGGTGGAGGGACGCAGATCATAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGGTGAGCTCCCTGACCCGCTAGATTTCTGTGAGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTGGGCGACGGGGTCGCGAAGAACCGTGGCTTCAACATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCTGATCATCCAGCTGGTCGGCGGGATTGTCGGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCAGGCGATCCGTCTGTCGAAGGACTCGAACGGCCAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGTGGTAATTCCGATTGGTTTCCACCGTTTGATAAGATTGCCCCTCCTTCTGGGGGGCCCTTCATTGAGGCGACATGGATGGCGTGATCCGTGACTATGTGGCAGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAATTCTACGGAGAACAGCAAGAATAATGGGTCGCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGGGAGGGCGAGGCTCGAAGCGATGACAGCACTCGCCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCCTGTTTTCGGGGCGCTTGAGGGCACGACGACTTTCGAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGGCGGAAGCGCCACCATGCGACCCCCGTCACCCCGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGGTCGCAGCTGCCGGTGATCTTGCCGAGGGTCTTGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGAGCGTTGCCAGGCGGTGAAGGCTTTGTTGTCGCCGTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTCGAATCAGGGAAGTAGGCGTTCGTTGCCGTTCATATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTGCCATGTGGACCCCTCACCCCGACAAATTTCCTCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGGGCCTGCTGGGTGTCGGGGTCGGGGTCGTCCGACGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGACGACTCAAAACTTGCGCACCCACTGGATCACCTATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTCGGAGAGGTGTCCGGTGACCAGGTGACAACCGAATTGCCCCTCCTTCTGGAGGGGCCCTTAATTGAGGCGCTTCCGTTGGTGAACACCATTTTGGTTTGATTCCACTCATTGCCCCTCCTTCTGGAGGGGACCTTCATTGAGGCTCGTCGTGGGCGCCGGGCACGTCCATCTATCTGGCAAAATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAAGATGAGCGGGCCGAGGGGTTCGACCCGGGACGCGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCTGATGCCCCAGGCCGGCGCGCAACTGCTCACCGAGCTGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAGGCGCCAAGGGAATGCGCTTCTACAACCGCGTCACGCTGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAGATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGCAACCTGTGGGGCTTCCCGGTTGTCGTCACGACCGCATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCCGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGTATTGCCTCTCCTTCTGGAGGGGCCCTTCATTGAGGCGTCATGGTGTGCGCACAGAAACCTAGAGTACGGGCGGATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGAGCGAAAGAGCGATCATTCCGGGTATGGATCAAACCATTGCTCATCCTTCTGGAGGGGCCCTTCATTGAGGC

>NZ_LT576042|4|1|2192257-2196491|PILER-CR
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGCGGACATAGACCGGCCCCATTCCGAAGCCCACA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACAGAAACGGTCTTGGTGCATGTTGCTGTCCTCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTAAAACGGGACTGCTTGGCTGGTGATGATGAAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ATGTCATCTGCCACCGCACCTGCTGGGCAATCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGTGTTACGTGTTGAAGGGGTCCAGCCCTTCACGAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCTCAAAGGCCGCTTTTGAGCTGACTTTTCAGGGGGCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGCCGCCCTTCACACGGGTGGCCGGTGTGTGGTTAAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCCACGTCCAGGCTCTGTGCCGCGAGCATTTCCAGCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGCTCGTGCGACCGCTGCGGGAAGCCCATTTTCGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCACCGCGCTCTGACAAGGCCCGATACTTTCGCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGTGCAGCAGTCACTGCGCAAGTGGGGGCGTCGGGA
ATTGCCCCTCCTTCTGGAGGAGCCCTTCATTGAGGC	CGCGAGCGAGCCAAGGCCGAGGCCGACCGCTTCACAAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTCGGTCATGATCCTGGTCCTTTCAGGGTCTGGGCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTTCTCCACCCGCGGCCAGGCCATCGCCTCCATCAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTTGTGTGGCACCGTGTCGGACACCAGCGTCCGGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGAGCTCTCGTCCCTGCAGCTCGACGCGCTGGTCAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGGTGCCACATCAGCCAGAAGCCCAGCAGCCGCTGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCGGCGCGGGCATTGGTGACTGCACCTCCGGCCTCGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCCCATGTCATCAGAGGATCCTTTGGTAGGACAGGGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTGCCGACCAGCCCGGCGACCACGGTATTCACGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCACCTGAAGCCCGAGGCGCTCCCGGATCCGGATC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCTGAACCGCCGATAAGCACGGCCAGCCACCCGGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GAGCTGATCGGCAAGGTCCCGACGCCCCCACTTGCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGCCGCCGAAGACCGCGCAATCGACATCCTCCAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACTCCTTCTCGATAGTTCCTTGTCCGGTCGGCCCTC
ATTGCGCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTATCCGTTTCGACTGTCGCCACCGACTGCACCGGGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGCGTCCGGATGCCGGGGTCACCCGTCAAACCAA
ATTGCCCCTCCTTCTGGAGGGTCCCTTCATTGAGGC	TCCCACCACGCTGGCGATCCAGCCTTCGACCATGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TAATCTCCTCTGTAGGTGGAGGGACGCAGATCATA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGGTGAGCTCCCTGACCCGCTAGATTTCTGTGAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGGGCGACGGGGTCGCGAAGAACCGTGGCTTCAAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTGATCATCCAGCTGGTCGGCGGGATTGTCGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CAGGCGATCCGTCTGTCGAAGGACTCGAACGGCCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGTGGTAATTCCGATTGGTTTCCACCGTTTGATAAG
ATTGCCCCTCCTTCTGGGGGGCCCTTCATTGAGGCG	ACATGGATGGCGTGATCCGTGACTATGTGGCAGCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	ATTCTACGGAGAACAGCAAGAATAATGGGTCGCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	GGAGGGCGAGGCTCGAAGCGATGACAGCACTCGCCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCC	CTGTTTTCGGGGCGCTTGAGGGCACGACGACTTTCGAA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	GGCGGAAGCGCCACCATGCGACCCCCGTCACCCCGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	GGTCGCAGCTGCCGGTGATCTTGCCGAGGGTCTTGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	AGCGTTGCCAGGCGGTGAAGGCTTTGTTGTCGCCGTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	TCGAATCAGGGAAGTAGGCGTTCGTTGCCGTTCATA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	TGCCATGTGGACCCCTCACCCCGACAAATTTCCTCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCC	GGGCCTGCTGGGTGTCGGGGTCGGGGTCGTCCGACGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	CCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	CCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	ACGACTCAAAACTTGCGCACCCACTGGATCACCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	TCGGAGAGGTGTCCGGTGACCAGGTGACAACCGAA
TTGCCCCTCCTTCTGGAGGGGCCCTTAATTGAGGCG	CTTCCGTTGGTGAACACCATTTTGGTTTGATTCCACTCA
TTGCCCCTCCTTCTGGAGGGGACCTTCATTGAGGCT	CGTCGTGGGCGCCGGGCACGTCCATCTATCTGGCAAAA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	AGATGAGCGGGCCGAGGGGTTCGACCCGGGACGCGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCT	GATGCCCCAGGCCGGCGCGCAACTGCTCACCGAGCTGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	GGCGCCAAGGGAATGCGCTTCTACAACCGCGTCACGCTGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	TGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAGA
TTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGCA	ACCTGTGGGGCTTCCCGGTTGTCGTCACGACCGCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGCC	GCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGTA
TTGCCTCTCCTTCTGGAGGGGCCCTTCATTGAGGCG	TCATGGTGTGCGCACAGAAACCTAGAGTACGGGCGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGAG	CGAAAGAGCGATCATTCCGGGTATGGATCAAACCA
TTGCTCATCCTTCTGGAGGGGCCCTTCATTGAGGC

>NZ_LT576042|4|4|2192257-2196491|CRISPRCasFinder
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGCGGACATAGACCGGCCCCATTCCGAAGCCCACA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACAGAAACGGTCTTGGTGCATGTTGCTGTCCTCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTAAAACGGGACTGCTTGGCTGGTGATGATGAAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ATGTCATCTGCCACCGCACCTGCTGGGCAATCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGTGTTACGTGTTGAAGGGGTCCAGCCCTTCACGAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCTCAAAGGCCGCTTTTGAGCTGACTTTTCAGGGGGCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCGCCGCCCTTCACACGGGTGGCCGGTGTGTGGTTAAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCCACGTCCAGGCTCTGTGCCGCGAGCATTTCCAGCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGCTCGTGCGACCGCTGCGGGAAGCCCATTTTCGACG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCACCGCGCTCTGACAAGGCCCGATACTTTCGCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGCGTGCAGCAGTCACTGCGCAAGTGGGGGCGTCGGGA
ATTGCCCCTCCTTCTGGAGGAGCCCTTCATTGAGGC	CGCGAGCGAGCCAAGGCCGAGGCCGACCGCTTCACAAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGTCGGTCATGATCCTGGTCCTTTCAGGGTCTGGGCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CTTCTCCACCCGCGGCCAGGCCATCGCCTCCATCAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTTGTGTGGCACCGTGTCGGACACCAGCGTCCGGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGAGCTCTCGTCCCTGCAGCTCGACGCGCTGGTCAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGGTGCCACATCAGCCAGAAGCCCAGCAGCCGCTGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCGGCGCGGGCATTGGTGACTGCACCTCCGGCCTCGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCCCATGTCATCAGAGGATCCTTTGGTAGGACAGGGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTGCCGACCAGCCCGGCGACCACGGTATTCACGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTCACCTGAAGCCCGAGGCGCTCCCGGATCCGGATC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TCTGAACCGCCGATAAGCACGGCCAGCCACCCGGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GAGCTGATCGGCAAGGTCCCGACGCCCCCACTTGCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGCCGCCGAAGACCGCGCAATCGACATCCTCCAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	ACTCCTTCTCGATAGTTCCTTGTCCGGTCGGCCCTC
ATTGCGCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TTATCCGTTTCGACTGTCGCCACCGACTGCACCGGGAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGCGTCCGGATGCCGGGGTCACCCGTCAAACCAA
ATTGCCCCTCCTTCTGGAGGGTCCCTTCATTGAGGC	TCCCACCACGCTGGCGATCCAGCCTTCGACCATGCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TAATCTCCTCTGTAGGTGGAGGGACGCAGATCATA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGGTGAGCTCCCTGACCCGCTAGATTTCTGTGAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGGGCGACGGGGTCGCGAAGAACCGTGGCTTCAAC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCTGATCATCCAGCTGGTCGGCGGGATTGTCGGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CAGGCGATCCGTCTGTCGAAGGACTCGAACGGCCA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGTGGTAATTCCGATTGGTTTCCACCGTTTGATAA
GATTGCCCCTCCTTCTGGGGGGCCCTTCATTGAGGC	GACATGGATGGCGTGATCCGTGACTATGTGGCAGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AATTCTACGGAGAACAGCAAGAATAATGGGTCGCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GGGAGGGCGAGGCTCGAAGCGATGACAGCACTCGCCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CCTGTTTTCGGGGCGCTTGAGGGCACGACGACTTTCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGGCGGAAGCGCCACCATGCGACCCCCGTCACCCCG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGGTCGCAGCTGCCGGTGATCTTGCCGAGGGTCTTGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GAGCGTTGCCAGGCGGTGAAGGCTTTGTTGTCGCCGT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTCGAATCAGGGAAGTAGGCGTTCGTTGCCGTTCAT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGCCATGTGGACCCCTCACCCCGACAAATTTCCTC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGGGCCTGCTGGGTGTCGGGGTCGGGGTCGTCCGACGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GACGACTCAAAACTTGCGCACCCACTGGATCACCT
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTCGGAGAGGTGTCCGGTGACCAGGTGACAACCGA
ATTGCCCCTCCTTCTGGAGGGGCCCTTAATTGAGGC	GCTTCCGTTGGTGAACACCATTTTGGTTTGATTCCACTC
ATTGCCCCTCCTTCTGGAGGGGACCTTCATTGAGGC	TCGTCGTGGGCGCCGGGCACGTCCATCTATCTGGCAAA
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AAGATGAGCGGGCCGAGGGGTTCGACCCGGGACGCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	TGATGCCCCAGGCCGGCGCGCAACTGCTCACCGAGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AGGCGCCAAGGGAATGCGCTTCTACAACCGCGTCACGCTG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG
ATTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	AACCTGTGGGGCTTCCCGGTTGTCGTCACGACCGC
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC	CGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGT
ATTGCCTCTCCTTCTGGAGGGGCCCTTCATTGAGGC	GTCATGGTGTGCGCACAGAAACCTAGAGTACGGGCGG
ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGA	GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC
ATTGCTCATCCTTCTGGAGGGGCCCTTCATTGAGGC

>NZ_LT576042|4|1|2192259-2196489|CRT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCCGCGGACATAGACCGGCCCCATTCCGAAGCCCACAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CACAGAAACGGTCTTGGTGCATGTTGCTGTCCTCTCAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCTAAAACGGGACTGCTTGGCTGGTGATGATGAATAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CATGTCATCTGCCACCGCACCTGCTGGGCAATCGAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CAGTGTTACGTGTTGAAGGGGTCCAGCCCTTCACGAAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTCTCAAAGGCCGCTTTTGAGCTGACTTTTCAGGGGGCGAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCCGCCGCCCTTCACACGGGTGGCCGGTGTGTGGTTAAAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTCCACGTCCAGGCTCTGTGCCGCGAGCATTTCCAGCTAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCGCTCGTGCGACCGCTGCGGGAAGCCCATTTTCGACGAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTCACCGCGCTCTGACAAGGCCCGATACTTTCGCCCGAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGGCGTGCAGCAGTCACTGCGCAAGTGGGGGCGTCGGGAAT
TGCCCCTCCTTCTGGAGGAGCCCTTCATTGAGG	CCGCGAGCGAGCCAAGGCCGAGGCCGACCGCTTCACAAAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTGTCGGTCATGATCCTGGTCCTTTCAGGGTCTGGGCTAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCTTCTCCACCCGCGGCCAGGCCATCGCCTCCATCACAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTTGTGTGGCACCGTGTCGGACACCAGCGTCCGGCAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCGAGCTCTCGTCCCTGCAGCTCGACGCGCTGGTCAAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CAGGTGCCACATCAGCCAGAAGCCCAGCAGCCGCTGCAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTCGGCGCGGGCATTGGTGACTGCACCTCCGGCCTCGATAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTCCCATGTCATCAGAGGATCCTTTGGTAGGACAGGGTAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTGCCGACCAGCCCGGCGACCACGGTATTCACGAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTCACCTGAAGCCCGAGGCGCTCCCGGATCCGGATCAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTCTGAACCGCCGATAAGCACGGCCAGCCACCCGGAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGAGCTGATCGGCAAGGTCCCGACGCCCCCACTTGCGAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGACGCCGCCGAAGACCGCGCAATCGACATCCTCCACAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CACTCCTTCTCGATAGTTCCTTGTCCGGTCGGCCCTCAT
TGCGCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTTATCCGTTTCGACTGTCGCCACCGACTGCACCGGGATAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCGCGTCCGGATGCCGGGGTCACCCGTCAAACCAAAT
TGCCCCTCCTTCTGGAGGGTCCCTTCATTGAGG	CTCCCACCACGCTGGCGATCCAGCCTTCGACCATGCAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CTAATCTCCTCTGTAGGTGGAGGGACGCAGATCATAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCGGTGAGCTCCCTGACCCGCTAGATTTCTGTGAGCAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGTGGGCGACGGGGTCGCGAAGAACCGTGGCTTCAACAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGCTGATCATCCAGCTGGTCGGCGGGATTGTCGGGAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CCAGGCGATCCGTCTGTCGAAGGACTCGAACGGCCAAT
TGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGG	CGGTGGTAATTCCGATTGGTTTCCACCGTTTGATAAGA
TTGCCCCTCCTTCTGGGGGGCCCTTCATTGAGG	CGACATGGATGGCGTGATCCGTGACTATGTGGCAGCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAATTCTACGGAGAACAGCAAGAATAATGGGTCGCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGGGAGGGCGAGGCTCGAAGCGATGACAGCACTCGCCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCCCTGTTTTCGGGGCGCTTGAGGGCACGACGACTTTCGAA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAGGCGGAAGCGCCACCATGCGACCCCCGTCACCCCGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAGGTCGCAGCTGCCGGTGATCTTGCCGAGGGTCTTGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGAGCGTTGCCAGGCGGTGAAGGCTTTGTTGTCGCCGTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGTCGAATCAGGGAAGTAGGCGTTCGTTGCCGTTCATA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGTGCCATGTGGACCCCTCACCCCGACAAATTTCCTCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCCGGGCCTGCTGGGTGTCGGGGTCGGGGTCGTCCGACGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGACGACTCAAAACTTGCGCACCCACTGGATCACCTA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGTCGGAGAGGTGTCCGGTGACCAGGTGACAACCGAA
TTGCCCCTCCTTCTGGAGGGGCCCTTAATTGAG	GCGCTTCCGTTGGTGAACACCATTTTGGTTTGATTCCACTCA
TTGCCCCTCCTTCTGGAGGGGACCTTCATTGAG	GCTCGTCGTGGGCGCCGGGCACGTCCATCTATCTGGCAAAA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAAGATGAGCGGGCCGAGGGGTTCGACCCGGGACGCGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCTGATGCCCCAGGCCGGCGCGCAACTGCTCACCGAGCTGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAGGCGCCAAGGGAATGCGCTTCTACAACCGCGTCACGCTGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAGA
TTGCTCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCAACCTGTGGGGCTTCCCGGTTGTCGTCACGACCGCA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GCCGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGTA
TTGCCTCTCCTTCTGGAGGGGCCCTTCATTGAG	GCGTCATGGTGTGCGCACAGAAACCTAGAGTACGGGCGGA
TTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAG	GAGCGAAAGAGCGATCATTCCGGGTATGGATCAAACCA
TTGCTCATCCTTCTGGAGGGGCCCTTCATTGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_044658118.1\|2205988_2206303_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_013160300.1\|2185036_2186578_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NZ_LT576042.1\|WP_097776065.1\|2202213_2205093_+\|DUF3427-domain-containing-protein	unknown	unknown	gnl\|CDD\|197297
NZ_LT576042.1\|WP_055343475.1\|2181270_2181558_-\|DUF2249-domain-containing-protein	unknown	unknown	gnl\|CDD\|370777
NZ_LT576042.1\|WP_013160296.1\|2191775_2192078_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_LT576042.1\|WP_013160275.1\|2206746_2207679_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226309
NZ_LT576042.1\|WP_143828470.1\|2200749_2200989_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_055346851.1\|2197092_2197599_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_055346850.1\|2197633_2198164_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_060761331.1\|2180254_2181265_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225222
NZ_LT576042.1\|WP_044635951.1\|2189186_2190188_+\|hypothetical-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NZ_LT576042.1\|WP_048769660.1\|2201081_2201831_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|377857
NZ_LT576042.1\|WP_097775952.1\|2183835_2185035_+\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NZ_LT576042.1\|WP_013160297.1\|2190177_2191779_+\|CRISPR-associated-endonuclease-Cas4/Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|376633
NZ_LT576042.1\|WP_097775951.1\|2182032_2183307_-\|threonine-ammonia-lyase-IlvA	unknown	unknown	gnl\|CDD\|236318
NZ_LT576042.1\|WP_013160276.1\|2206532_2206706_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_055346849.1\|2198334_2199561_-\|ATP-grasp-domain-containing-protein	unknown	unknown	gnl\|CDD\|235876
NZ_LT576042.1\|WP_060761332.1\|2178902_2180180_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_172952786.1\|2205588_2205756_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_097775953.1\|2186574_2189190_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_048769660.1\|2201081_2201831_-\|HNH-endonuclease	gnl\|CDD\|377857	pfam07510, DUF1524, Protein of unknown function (DUF1524). This family of uncharacterized proteins contain a conserved HXXP motif. A similar motif is seen in protein families in the His-Me finger endonuclease superfamily which suggests this family of proteins may also act as endonucleases.	5.72153e-31
NZ_LT576042.1\|WP_097776065.1\|2202213_2205093_+\|DUF3427-domain-containing-protein	gnl\|CDD\|197297	cd09203, PLDc_N_DEXD_b1, N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. N-terminal putative catalytic domain of uncharacterized prokaryotic and archeal HKD family nucleases fused to a DEAD/DEAH box helicase domain. All members of this subfamily are uncharacterized. Other characterized members of the superfamily that have a related domain architecture ( containing a DEAD/DEAH box helicase domain), include the DNA/RNA helicase superfamily II (SF2) and Res-subunit of type III restriction endonucleases. In addition to the helicase-like region, members of this subfamily also contain one copy of the conserved HKD motif (H-x-K-x(4)-D, where x represents any amino acid residue) in the N-terminal putative catalytic domain. The HKD motif characterizes the phospholipase D (PLD, EC 3.1.4.4) superfamily.	1.20732e-75
NZ_LT576042.1\|WP_055343475.1\|2181270_2181558_-\|DUF2249-domain-containing-protein	gnl\|CDD\|370777	pfam10006, DUF2249, Uncharacterized conserved protein (DUF2249). Members of this family of hypothetical bacterial proteins have no known function.	2.88981e-23
NZ_LT576042.1\|WP_013160296.1\|2191775_2192078_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	3.51478e-21
NZ_LT576042.1\|WP_013160297.1\|2190177_2191779_+\|CRISPR-associated-endonuclease-Cas4/Cas1	gnl\|CDD\|376633	pfam01867, Cas_Cas1, CRISPR associated protein Cas1. Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. This family of proteins corresponds to Cas1, a CRISPR-associated protein. Cas1 may be involved in linking DNA segments to CRISPR.	1.95656e-93
NZ_LT576042.1\|WP_060761331.1\|2180254_2181265_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225222	COG2345, COG2345, Predicted transcriptional regulator [Transcription].	2.06018e-06
NZ_LT576042.1\|WP_044635951.1\|2189186_2190188_+\|hypothetical-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	1.00232e-143
NZ_LT576042.1\|WP_013160300.1\|2185036_2186578_+\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.5007e-128
NZ_LT576042.1\|WP_097775952.1\|2183835_2185035_+\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	1.41591e-30
NZ_LT576042.1\|WP_097775951.1\|2182032_2183307_-\|threonine-ammonia-lyase-IlvA	gnl\|CDD\|236318	PRK08639, PRK08639, threonine dehydratase; Validated.	0
NZ_LT576042.1\|WP_055346849.1\|2198334_2199561_-\|ATP-grasp-domain-containing-protein	gnl\|CDD\|235876	PRK06849, PRK06849, hypothetical protein; Provisional.	2.03615e-17
NZ_LT576042.1\|WP_013160275.1\|2206746_2207679_-\|hypothetical-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	3.08766e-19
NZ_LT576042.1\|WP_097775953.1\|2186574_2189190_+\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	2.43841e-80

>NZ_LT576042.1|WP_013160296.1|2191775_2192078_+|CRISPR-associated-endonuclease-Cas2
MSRRDSHCFLIAYDVPDDRRRTRLATVLKGYGERVQYSVFMVDCPPSHLLVLRHDLTDAMDIDEDSVVICDLGMSTSADAQRITWLGGQRYQSGGRSIII
>NZ_LT576042.1|WP_013160297.1|2190177_2191779_+|CRISPR-associated-endonuclease-Cas4/Cas1
MSGDDKLPISLVAHTVFCPRRAWLEAQGEQADSYAMTAGTLAHRRVDQPAESRPEVRRAVSVHSESLGITGRCDVVEVSSDGLSVVEYKSTPVRRKAEITPAQAVQVGLQSMCLEEMGHHVTSGVVHFVNHHKDVPVPLGAEAREACRDWVTETRKVVEADSAPPPLLDDSRCNGCSHATICLPDEQVHNGGELKRRISVADPHGEILHAVTPGARLSMRDRQIRITRQGEQLAAVPLERVQGLVLHGNVDVSGALIREILWRRLTIVWCSGRGRVVGWATGAAAPNGQARMHQQALSEVGCLPVARAIVRAKLINQATLLRRNAAAATAPQEIRELSRVAMRVESLPELFAVEGRAAKAYFSEFPLILKSDSAQDFLDEWPGRHGRGAIDPLNAALNYAYGMLLADCVRAIAACGLDPHGGFLHSPSRNKPALALDLMEEFRAPVADSAVITCINNQTLTADMFSHTLGDVRLTRAGIAALTSAYERRVTTDIKHPTFGYPATWRRTMEIQARLLLGFIDGTRSEYIGMTVR
>NZ_LT576042.1|WP_044635951.1|2189186_2190188_+|hypothetical-protein
MKFEITGTLDTAITHFALVGLANILQEAGAHRVRLWWQDGAVARPTLQWEGPDAGEAVLAHARRHADPACWLQARRPAPEDGHALFSPRLKPPTDDEGWFELEELREHFLDAGLTRLDQRMIVNLGEPGYWVRQDGQPRPDHAASRWEMKTRNRGEEFIGQRLAPLAREVSTWTAGKVLDGLGGRAVNDVVGKNKPDSRTPTGLSSPGPTDNALAWCSLWGISAFTLVPKSIGVSATAGAVPPARSYPRLLVVPVVADPISPVLWTALARSRELLSAFSDDPVRSVDARQLLVRRGVIGACSFPLDKSDNDSAPERTLLRGTLHPFQEDADVW
>NZ_LT576042.1|WP_097775953.1|2186574_2189190_+|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MTITLDDFATFFRAVNAGHDPFPWQTALLTGIAGSARWPSAITAPTGSGKSAVVEVHVFLNALYSAGSGPRVPRRLSTVVARRALVDSQADRAQRVADWLDEGDSPLAREMSALLQRLSAADDTPPLVIGHLRGGISLRSTWIDDPSACAVISATPDMWGSRLLLRGYGSSMAARPREGGLLGLDNAVVIDEAHLSRQLVGTARWVSQHNADVAERLGVPGLQVVESSATTRSASPDGIGIGPDDLADPTLRPRLTLPKPVTVVESAAWSGKKATDQYISTLVDQVQDMARTADDGTIGCIVNRVDTALRVAERLGDDCPCWVGPMRPLDLAQLKRSYPALLGLDTAPRQAMPRFLVATQTVEVGVDLDLSGLVTELAPADSLTQRFGRVNRRGLRDSGPLTVVAPPQDKLAEQLPYSLDDLADALQWLGGLPDTEGASPQAVADHPPKARTPERAIVKLPHVGDVMRWDATADLMWAGEDLELWVRDSLEPDDAQVGIVVRQPLPDEDAEVIPLLAATPVDQAEVFPAGIAVARAVVDRILEGRGDHARAFLSRADEITPLGADDASAIRPGDVVIVDAGHALTRHGVVVSDANRAESLETRWGTPDVAVIQKDSADSQWLSALADLTAEDAQTEYSDLGGEGLLTLGPPNALGELPWIVVTSQKTAEEDEELRQEWSASDEPVLLTAHQSNVAGRARRLGERVALDPELTAALELAGAHHDDGKADPRFQHLRLSNYSSLVLAKSEHRSSQAVVRRQFAGGELPRGWRHELRSVAVSWAEVSLAPHGPLVARLIGTSHGRGRILPQPDAASLATPSDPAEVNERVAALFGSGEWPELMAATSTTYGVWGCAYLEALLRAADCQVSKEGS
>NZ_LT576042.1|WP_013160300.1|2185036_2186578_+|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MSPLTIRAVFPLGVFQGHRADGSPDRLPDTARLFSALVNAAGQGSEAIAVKGRLEPSSESTAALSWLEKHPPTMIRIPNHVPVSPDRRPDAYRKTGTVQGPKKSPAMRIGARQISTGTAIDDCVGWFWADAPSEVQETVGRLCADVSCLGEDDSPVILTLDQFVPTHELVASTQQLRPTGLAVRTPGPGRLDELIRAHHEAFPPKMPSAAQDSPSFSEMPRGSRVPTEGLRVLRYKSPTPPPADSPWPLAMLLPLSAHIALEDGLTWCVAMHRMLISRLGDGAPAIVTGHYARGASQPANRVAVQYLPPTLLSHRAESGDFPHGAIALLLPASIAAEDRGEIVRALNSPRLGLWSSAGRVTLGTPLRIDASQFWPTPQPGWRRQWRTLDGMVPETRRQPRHELLGAWGFPQSALLSVGHVFREELALTRANTYWETVSVVTDRGVQILGTHLIPDSEVSRYVHKVPRSIGVVQPYSAQLDLADLVNDRALLALGQARHLGGGLLVPMDSPEVS
>NZ_LT576042.1|WP_097775952.1|2183835_2185035_+|type-I-U-CRISPR-associated-protein-Cas7
MTDLTYSDLEAACSAGGASVLSSVTELAPAAGPQAGIAPARYVQGRDGTYAYETRFIDGEPSSVVVVDSKASQLNRVEDAISLAIEEGDPSLTRMPSIRVDYETLSATDYQLPHRFSDGHIRFGTVDGEVTTKHPAYVAARNASPANARALLELSPVSLAFGAWDSTRKAHQARFRSCLVGEIIGQLADQTEAGRKPPRRGSARKDDIAPSVQLNEKDMLTLLATQEDEMSPTTVDKITKDAKKAKNKPTSASVLGLGAIPPSLDGLGFVSCRRIIRSHVLSFSALRQLRFGADNAGNVACRALLAALSLHGLALSDQELELRANCDLVEAGDPVVTLDGRRGTHTELEPLVPEVTGPILATAIERAVATAGIRWDGQVLEVTGNPIILAGATADADED
>NZ_LT576042.1|WP_097775951.1|2182032_2183307_-|threonine-ammonia-lyase-IlvA
MTTTEVSTLAHLVDQAAEGLAGVARVTPLQYNERISSTSGCRVWLKREDLQPVRSYKLRGAYTFISKLSDDEKRAGVICASAGNHGQGVAWACARLGITGTVHVPSTTPRQKRDRIRFFGGDHVRLVVGGDTYDDAARAAQVEADRTGATMVPAFDDPLIASGQGTVARELVEQLDHAPDVLVVPVGGGGLLSGCGAWMRENHPETRIIAVEPAGAAGLAAAMDAGRPVRLDHIDSFVDGAAVARVGDFTFKIARQLAPDLIAIPEGQVCTEMLSMYQVDGIIAEPAGALAASALSVHPMDTTLGIDPSQEIAIIVSGGNNDVSRYAEVVERSGVHEGRRRYFLVNFPQEPGALRRFLNEVLGADDDIIVFDYTKHSNRDTGPALVGIELGDPTNFAELWTRMEESPLNVEVLEPDTAIYRMLV
>NZ_LT576042.1|WP_055343475.1|2181270_2181558_-|DUF2249-domain-containing-protein
MTDLPITQTHHCTCAEGDTNTPELDARAIPHAIRHAAILGALQGLGHNESMILVAPHNPLPLLDQIDSMWPDVFSLEYVQEGPDAWKIRFTRVAA
>NZ_LT576042.1|WP_060761331.1|2180254_2181265_-|helix-turn-helix-domain-containing-protein
MDGQTGPVRRAADLGVGATDGAHPSDRGAPLDPQCQRLMDALLTTPGPMTVAQLGADAEMRPNTVRFHLAHLGDAGLVSGVSARTTTRGRPGVLYRATARAFDSGPQHPRLLTEVLMHHFLAEAATPPPSVEGPQRPTTVWERARRAGRAWSSHVETLPGGSPAHGGAGPEHVTDGTAKFDALLTQLGNWGLAPNRIRDPGVPDGSAVPDESAAASTHSPVGSTIGPGPVSPDPAAAQRDHLPDRIRIGLNRCPFAHEASECPDLVCGVHAGIIDGLLAQLGGSWRVARLTPHASAGQCLLDAELTHPALQAPPCPAAAYPDSVHRAGRGGTTPRA
>NZ_LT576042.1|WP_060761332.1|2178902_2180180_-|hypothetical-protein
MSQPVAVPEQGSADPPLKPASQTRRVIVLLVPCGVAMVMGLDAALVLLGPPAPLSGERFSSAHGIIMTIGFLEALVSLESAVSLRRLWAYCAPAALAVGALLVLTPLPLQAGQLLMLVGCALLIVNYSVLWTRKHEPMVAVQVGGALAALGAVLLWTGGVSIPDLFAWLVTFLVLTIAAERVVISRFSPSVLTPAGARRYQRGIVVISALIVFACPLTTIWSGRVLPVFGLALIALTVVAAWGDGARSDLRVRARATVAGSDAASDADTASGSAITPSQRFTGVMVFISYMWLIVTGLLLVHPTLSGLHYDALLHAVFLGFVMTMVVAHVPTYLPFLLEIRFRFNPGFWGVAVLLNVGLVVRIVADLAGSETGRTLGGLANIAALLSLVAVAVWAAVVKGPEDPQAPAGDTRAISDTSPTKDSRA
>NZ_LT576042.1|WP_055346851.1|2197092_2197599_+|hypothetical-protein
MIENPGQTNNQPQSDDTERPEVRLVPVQLEINGSYALQLEDDKKFHPVAQDIVGLCELLVRRSEDLGAPLLPSIDQSDSANEVALANAAPFPIISDRYGTLEVPIDMAGFLKSMDESTPYTGELLGTDLMHIGQMMKELSIKTGIQWVPMPVGKAENGELGTMTPDQQ
>NZ_LT576042.1|WP_055346850.1|2197633_2198164_-|hypothetical-protein
MSDTPVSDTPRPSHDPRPKVTLRTVLIAIGVVLVVLIAGAIVVTTRNASTPDTNPSPVAPAAVSTMSSGAVASRAAMMEEEKPDSEHVVEFRATTNRPGFVVYRVTDGEGTRADMTQSWSHEERVKNLDGVFLKVKSLSGGDADAEVSCQILVDGQVWGSDSGSGRGAFSKCLLRG
>NZ_LT576042.1|WP_055346849.1|2198334_2199561_-|ATP-grasp-domain-containing-protein
MHGERVLLSEGSSLTARETLTVLGRRGVQVEIVSASSAPIAQFSRWCRRLHHAPAPATDPVGYLAGVDALMATGRFTALIPTHEQAWLFAAGRRLLPHARVAVADIGAFGQLESKVRFARLLDHLALPQPAWAEVQQESDLDRLGFPVWVKAAFSTAGRGVRHVHNHHEAVSAWHALRSPDNPVMVQQSAPGRYRQVQAIFDHGRLVAAAVSEQLATGVGGSAAARLSVGDPVAVDAIRRVGEHLDWQGGIDLDFFSSQGQPQFIECNPRTVEPGNAAAAGVNLPQLLVDLATGAPLPHQPVIARAGVRTRSTMAIGLGAAESPGTRRGIGGALLRAVARRGPLRGSAEVLTPVLHDPPSLIPPLVTLPRVLANPRAVEHLAGRSVGAYAVGASAVAIASAAAAGQSG
>NZ_LT576042.1|WP_143828470.1|2200749_2200989_-|hypothetical-protein
MSTTPDTEPTTTGRAHEKITSTELVPIAPAVKHRLSATPPATRTSPSRGHLEALREQLAQGDLSIDDAARLTREYIDNI
>NZ_LT576042.1|WP_048769660.1|2201081_2201831_-|HNH-endonuclease
MAHHRSAGWLALAAFVAASVLVGCDPPATTGSPSTSASSSVATSTPTPSITQTSAAGEAVATGDAEAVRQLLNTLPVKGRAPKTGYERSEFGTAWKDVDHNGCDTRNDILARDLTDKVYKPGTHDCVVASGVLHDPYTGTTIHFTRGQNTSTAVQIDHIVALSDAWQKGAQQLSGDLRTQLANDPLNLLAVDGPTNQQKSDGDAATWLPPNKAFRCTYVTHQVQVKAKYSLWVTQAEKAAITNQLGTCS
>NZ_LT576042.1|WP_097776065.1|2202213_2205093_+|DUF3427-domain-containing-protein
MELQSLTDGRPRYATRPLTPLNESTLITNARRDESLAQALNLELATADRVDLLCAFVKWSGIQSIMDTLAMLHEQGVPVRLLTTTYMGATDATAIHRLADELGFQVKVNYNTGTTRLHAKSWMIYRNSGFHTAFIGSSNLSHAAMVDGLEWNVRVSAVNELALFSKLGTAFDTYWDDPKFEPYLPGRDDERLATSLKQAVTQPGRHFDAAFLDIQPQPHQRIMLDDLAHERQQDFHRNLVVAATGTGKTVLAALDYLRLCGDTPGSLSLLFVAHRKEILEQARSTYAHVLNDANFGELLVGGEHPTEHRHVFASVQSLSRMNLDALDPTAFDVMVIDEFHHAEAATYRRILDHFQPRELLGLTATPERADGVNVASFFGDRIASELRLWDALDGDLLAPFHYFVQWDDTDLRGVKASGGEYQAGELSRLYTDNDGRSRLVLAAMRHRILDPTRMKALAFCVSVEHAHYMADVLSQAGVPSVALSGQSSREIREAAIRDLREGRLACLCTVDLFNEGIDIPSIDTVIMLRPTQSATIFLQQLGRGLRRAPGKSVLTVLDFVGHQREDFSFEPRLRALTGQGRKQLVDSVEKGFSELPAGCEIQFDKMSQKEVLKNVKRQLATTTLRLVDEFADYARRSASPTEYSLRRFLAESGLTLGSIFGRSKFRGEPVEMTFIRHRAGLAATIDVSPTGTYLRGRVRNFAHVDDPARAQAYVALSSPQGPQWDNLGPMQRIAAEMLFYSVWPKGRDQDDQLIGSIRDGLDVLRAHGWFSDELREVMESSVDASRAVFERPGGNLAGTPLVVHGTYRREELLAAIGVGRADGDARMPGDVREGVVWVESTGIGALSVQLEKDSDSFTDTTMYADYAINDTLFHWQSQSATTPGSSSGRRLLGEHAQSFDLALFVRQRGNDDLGKGAPYTFLGLVDLVSYSGSKPISITWRLRRPMPHGLYLAARAAAT
>NZ_LT576042.1|WP_172952786.1|2205588_2205756_+|hypothetical-protein
MRVLTLLTMAFATFTMWLPNGYWWARALVTTSLVVSAIIDIIHVQRLRKERRESS
>NZ_LT576042.1|WP_044658118.1|2205988_2206303_+|hypothetical-protein
MDVALGIAGTLMILLALDRALRWMERRGWIYYRKRKRTAGVALGPLFEALHPSHQYVATEQQRQSTVRKDSEDGQDRSPREDQPTVGPDAQIARHTHRAEPPSA
>NZ_LT576042.1|WP_013160276.1|2206532_2206706_+|hypothetical-protein
MTRETTAQVAMHTMGAASTVYVWAARGPKWARITTTACTLTVVALDAYLLGRWLRTR
>NZ_LT576042.1|WP_013160275.1|2206746_2207679_-|hypothetical-protein
MKRIPVAIVGCAVALVAGSAVAGSAARAARLDAVARPSLSASVDVSASGVGGAEQSAGQASPGGSTPAVSSPAASAPAGEPSRARGAAAQQPEATASSQPGSGTTDAPAQTGITTIPAAVAASPTGALTDQVVAVVASGSSAQVHLLNRRAAGSWDDEWAQSGFVGAGGVGRAHEGSSVTPAGSWPLGPAFGTGADPGTLLPYTQLNAGSCWVSDPGDPDYNSYAERDACDVPNLRMADFSEQYRYGLVIGQNAERAPGAGSASFVHVSNGAAGAASVALPQSAMASLLHEVHPGAHIVIASSIEELATY

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Crispr_ID: NZ_LT576042_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_5

2432420-2432531

Orphan

Consensus_repeat	Method
GTGGTCACCTGTGCGGCGTCATTGCCGCACAACTGCCCAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT576042_5

>merge|NZ_LT576042|5|2432420-2432531|CRISPRCasFinder
GTGGTCACCTGTGCGGCGTCATTGCCGCACAACTGCCCACCTGGCCAGAAACCTCTACCCCGAGCCCCTTGAGTGGTCACCTGTGCGGCGTCATTCCCGCACAACTGCCCAC

>NZ_LT576042|5|5|2432420-2432531|CRISPRCasFinder
GTGGTCACCTGTGCGGCGTCATTGCCGCACAACTGCCCAC	CTGGCCAGAAACCTCTACCCCGAGCCCCTTGA
GTGGTCACCTGTGCGGCGTCATTCCCGCACAACTGCCCAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_155642692.1\|2428176_2428458_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_013160070.1\|2441345_2441993_+\|CueP-family-metal-binding-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_036943004.1\|2435612_2437037_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_LT576042.1\|WP_055345737.1\|2423516_2424566_-\|beta-propeller-fold-lactonase-family-protein	unknown	unknown	gnl\|CDD\|225333
NZ_LT576042.1\|WP_036943006.1\|2437691_2439218_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_LT576042.1\|WP_060759324.1\|2427101_2428250_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_LT576042.1\|WP_041704379.1\|2443340_2444018_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_LT576042.1\|WP_013160069.1\|2442054_2443176_-\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_LT576042.1\|WP_013160072.1\|2439601_2440348_+\|NAD-dependent-protein-deacylase	unknown	unknown	gnl\|CDD\|234777
NZ_LT576042.1\|WP_036942942.1\|2433780_2434218_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_036942929.1\|2418117_2418804_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_LT576042.1\|WP_013160082.1\|2425569_2426289_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506
NZ_LT576042.1\|WP_155489676.1\|2429644_2432233_+\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_LT576042.1\|WP_013160081.1\|2426285_2426969_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181298
NZ_LT576042.1\|WP_013160071.1\|2440515_2441013_-\|thiol-peroxidase	unknown	unknown	gnl\|CDD\|179055
NZ_LT576042.1\|WP_055345736.1\|2424652_2425471_+\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_LT576042.1\|WP_044657709.1\|2419959_2422416_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_LT576042.1\|WP_013160087.1\|2419081_2419960_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224059
NZ_LT576042.1\|WP_013160075.1\|2434467_2435439_+\|NAD(P)H-quinone-oxidoreductase	unknown	unknown	gnl\|CDD\|176180
NZ_LT576042.1\|WP_044636672.1\|2432782_2433784_+\|IS481-family-transposase	unknown	unknown	gnl\|CDD\|372671

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_013160069.1\|2442054_2443176_-\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	4.0088e-49
NZ_LT576042.1\|WP_036943004.1\|2435612_2437037_+\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_LT576042.1\|WP_055345737.1\|2423516_2424566_-\|beta-propeller-fold-lactonase-family-protein	gnl\|CDD\|225333	COG2706, COG2706, 3-carboxymuconate cyclase [Carbohydrate transport and metabolism].	2.30631e-33
NZ_LT576042.1\|WP_036943006.1\|2437691_2439218_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	2.94337e-38
NZ_LT576042.1\|WP_041704379.1\|2443340_2444018_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.89837e-80
NZ_LT576042.1\|WP_060759324.1\|2427101_2428250_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	2.79526e-20
NZ_LT576042.1\|WP_044636672.1\|2432782_2433784_+\|IS481-family-transposase	gnl\|CDD\|372671	pfam13683, rve_3, Integrase core domain.	3.49928e-22
NZ_LT576042.1\|WP_013160072.1\|2439601_2440348_+\|NAD-dependent-protein-deacylase	gnl\|CDD\|234777	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.	7.06066e-122
NZ_LT576042.1\|WP_036942929.1\|2418117_2418804_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.34929e-66
NZ_LT576042.1\|WP_013160082.1\|2425569_2426289_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	2.44995e-102
NZ_LT576042.1\|WP_155489676.1\|2429644_2432233_+\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	1.04797e-31
NZ_LT576042.1\|WP_013160081.1\|2426285_2426969_-\|SDR-family-oxidoreductase	gnl\|CDD\|181298	PRK08219, PRK08219, SDR family oxidoreductase.	1.09359e-113
NZ_LT576042.1\|WP_013160071.1\|2440515_2441013_-\|thiol-peroxidase	gnl\|CDD\|179055	PRK00522, tpx, thiol peroxidase.	1.19326e-95
NZ_LT576042.1\|WP_055345736.1\|2424652_2425471_+\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.24531e-60
NZ_LT576042.1\|WP_044657709.1\|2419959_2422416_+\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	8.57511e-18
NZ_LT576042.1\|WP_013160087.1\|2419081_2419960_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	8.56637e-108
NZ_LT576042.1\|WP_013160075.1\|2434467_2435439_+\|NAD(P)H-quinone-oxidoreductase	gnl\|CDD\|176180	cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	7.73578e-158

>NZ_LT576042.1|WP_155489676.1|2429644_2432233_+|LCP-family-protein
MADDDVQRPRRVRRAADDAHSATPPASGTPGTPRRIWARPQPEDPPTTPPAAPEAPAAPSTPADPTPTGGSSRRGMGTNEPHVSKWGTRESTPEPTASATPRRSWSRRRAESTGDQPPVGSGHPTGEGTGPRHARRSAPIHKPVESDLSHPDAPRSTAAADATTPSPAPAEQAPTRPAPPAAATPRGRQHDAPTPRASAPDKHVASRRTPATTPPAAATPHSAAPHSPAPHDPTPPSPTTHAPTPGTPTAPRSERGANLTLGGEPLGEHTAFLHAPDYRHANAAARAAARERARRAAAGTEPAAHDGELFDVEQVGLREPPPPPPEPEPASLRSRFAAFTERSDDTGSHGFGWTMLRTTLGSLIPGAGLIGTRLTMIGTLLFMMTVVFGSGVILAAVVHPPALMATVMNSVGLTAIGTMLVAVTIIWMAIVAGTYLVTRPRRMKRWQRIAGAIVVFLMAALVGSVSSVGAAYAFESAIVVSDVFGNSKTRSQTRPLGDWANKDRVNILLLGGDSGADRDEDLGLRTDTVMLASINTHTGNTVFIQLPRNLENVPFPAGSDLAKVYPNGRVWDRSSGTEDNYMLNAVWNEVPLEHPELFRNTDQPGADATKLAVSGITGLTVDYYAMINIDGIQALVDAMGGVVVNINFPIAKGGHVDGYGDEECGVDGNLSVGPDQKLDGADAMWYARSRCNDPDYDYGRMRRQSCLVNAIIRQANPQTMLTRYEAIAAAGKNMMSTDIPESLLDDATNLALQVKDAQVSRVVFSQAIGTAPQVGDINPGNPDYNAIRNRISGAITASDNGTTPSAPASASSSPMATGSAGSASSVASAAGSGSTSASAAGAAATPSGTAENMSGACDYHPN
>NZ_LT576042.1|WP_155642692.1|2428176_2428458_+|hypothetical-protein
MGRLRSLVVVGPLVATRVLQLFIGEPVSGALNALATLVIVLAVVMVVPTRSHRSLSGWLTGADMVDSRSMTPTAAGPGAGGPGAGGSGAADPT
>NZ_LT576042.1|WP_060759324.1|2427101_2428250_+|VanZ-family-protein
MEVWQNNAFVTVLVGGVAFLVLFLPYVVWSFHRFGQLSFRRIIGWAAVCVYFTGLAVYTLVPFPEDPQAFCASTHVGYNLHPLEFITDIRTQTAGMGLRSALTSAVVLQVVFNVVLFVPLGVLLHRYFRRGAITSTLIGLIMSVCIETTQYTGFFGLLPCAYRVADVDDVITNTAGTLIGALIAPLLLFWMPASRTLTSTRLVARPVTSMRRWVGMVVDGFLFYLIAASSSIAVLVAGRLLSWWPVEAEPEWISPAGDVVALLMVFVIPSLTGRGGSLGQRVVWLTPRWPAAAGSGDGSGGAVGADSSGDTVGGGWPDGAAPDGGQMGGGTYRGGSLDSGSLGSGLPSSGLSDGRTLANGPLAFAGGRGPAGGHAGAPAVHR
>NZ_LT576042.1|WP_013160081.1|2426285_2426969_-|SDR-family-oxidoreductase
MAERRAVLITGATRGIGRAIADELADDWHVLVGGRHPDQVRKVVQALPSAEPFIADLTDAGAMQAAVEQIGHLDAVVHSAGAVVMGPVSELSRQDWRDLYEINVVAVADLTAELLPKLREAHGQVVTINSGSGFHTGPGQTCYAATKHALVAFTDGLREEERGVVRVTSVHPGRVDTDMQVDIQRQLGAQYQPERYLQPADVARAVELALTMRPGANVDTVSVRPAL
>NZ_LT576042.1|WP_013160082.1|2425569_2426289_-|glycerophosphodiester-phosphodiesterase
MTAVWAHRGASAAAPENTLPAFQAAATLGADGVELDVQRTRDGQLVVCHDETIDRTSNGVGNLADYTLSQLKEFDFSAGHPEFTNVAIPTLAEVFDVLGPTGLMINIELKNSVVPYEGMEAQVLALVHAAGWDDKVFYSSFNHRSMRRLAERDYPVGLLYDSVLWRAAKYAAELGASALHPSGRAVRVNPGVVRAAHKRGLSVNVWTIDKPAQIQALLDLEVDAIITNVPDVALGVRDA
>NZ_LT576042.1|WP_055345736.1|2424652_2425471_+|shikimate-dehydrogenase
MTHHAAVIGSPIAHSLSPVLHRAAYQQLGLHDWEYDAIEVTPDTLGEFIASRDNSWAGLSVTAPLKEALIEFGRPDQQSSELQSANTLIFGHPNRLFNTDVTGLRDAMASYDVIMPGTAVIMGAGATARSAISTLVRLGCRVIRVVARDAGRAHASLDRVAALYGTDLQIVDWSGFDALGADSADVLISTAPVQYTPEEAAQLAAVSQVVFDIVYQNYPTNLSRAAIKAGRVSVDGVDLLVHQAIDQVRLMTGEEPLAEPLIEVCRAELANR
>NZ_LT576042.1|WP_055345737.1|2423516_2424566_-|beta-propeller-fold-lactonase-family-protein
MSTQLCYVSGRRDGLITTVRFDDKAETAEVVSRLNLGPKPMPLELNRERRLLRVATGADPLRVSTLKLLPDGSCQVLSEVNCPLSATYLSFTPDDRMAFVVSYHASRLAWAPVWDNHLIDDSAWHVEQVGEQPHCVEPSPDGRHVYVVELGANRVQGFRVSDGELVADEQIGVQFEHGTGPRHLVFDASGEHGYLIEELGGHIVHLTRDPDSGRLTVAERVPYSDRADDLRPGVHVPSGSTPSLDDQTLRHWGAELALDPQRHWILASERRASTLNLQALNDDGSFGARLDHVPTEKQPRGMGLIGDHHVIAGAELGDTATIYRVDDQLEPVAEVEGLGGPVWFASIGS
>NZ_LT576042.1|WP_044657709.1|2419959_2422416_+|ABC-transporter-permease
MLRQPRQLISAGIAILLGVAFVAATFVFSASLNAGMTKLVAGMVGDAKVVVSPSETTYTPVTQQLTDTVSKVPGITHSKKIVQGSATLRLDGQDNHALISSQPDLSSQTTLFEGTLAKGDGQVTISKTAADAYRLKVGDKVTLANYDDRAFDETVVGIVNAGNDAVAQPLASWVFAPTEQAMTLASTSGYNMVFLYGNGDAGALRDAVQAAAGVSDAQLTVRTGQDEVQAAMKQMTGSTNSIQYVLLGFAAIALFVGIIVIANTFSILVAQRVRQLALLRCVGATRNQVFGMVFGEAAVLGLVGSAAGILAGFGLAAALIPLASKGAQIPLEFAISPAAVIVPLVVGVLITLAASISPARKATRVAPLAAMRPELAVSKAKRLGVVRAIIGIVLVVGGAAMLALGIVRAKPDTGVGGLAIAIAGGLLSFIGVLLVGRGLIPALARLIGAPLAKSSVSGDLAVGNTRRNPGRAAATANALLVGVTLITLLTVGASTSQASLDRYLSATYPQDAVVSAAKGIDEQALTRIKATDGVQDAALVPSTTTEVSSRDHAAQQRPVMGVDNTAAHLTHFPQRYENLDDNTVRTSDTSVHNGETVTIKGASGTTVQLTAKVSNDYSPSLVVSTTVLSKLDPGAAETAWVQYKSGVNVNTVTTDLGKAVGGLGQVSIDSGAQMRAQFGQMIDIVLAVAVGLLAVAVAIAVIGVANTLGLSVLERTQEIGLLRALGMTRRQVRSMISWEAVMIAVVAAALGLALGVAYGLIGAKVMLGSITSTPFVAGLPWVRLAAIGVIAVAAGWLASLIPASRANRISPSAALATE
>NZ_LT576042.1|WP_013160087.1|2419081_2419960_+|ABC-transporter-ATP-binding-protein
MTTMTQPTTAAVRTVHLTKIYGQGDTQVTALNDVSVEFIRGQFTAIMGPSGSGKSTLMHCAAGLDTPTSGQVFIGQVDATSLSDTNLTLLRRERVGFVFQAFNLLPTMTAEQNILLPLKLAHSKPDRQWLDTIVKVLGLQDRLSHRPAELSGGQQQRVAVARALITRPEVIFADEPTGALDSAASNELLDFLSRSVHELGQTIVMVTHDAHAAGFSDRVLRLADGRIVSDEPVNHPIAGQTPVPTTGFTSGAVAGTPNFAPAPGSAPQMGAANPQRPDDAPDAGLKRQAGDN
>NZ_LT576042.1|WP_036942929.1|2418117_2418804_+|response-regulator-transcription-factor
MADEPIRLLLADDQEMVRVGFRMVLDSQPDMAVVAEAPNGRDAVDAVLHAAPGQAPDVALMDIRMPVLDGVAATQKIVADSDTRVLILTTFDLDEYVYSALQAGASGFLLKDAGPTELLAAIRAVASGDSVVAPSATRRLLERFVPTLPIAQSGGDTKKRLEALTDREREVLTLVGQGLNNTEIAETLFLGSATVKTHIGHILAKLQLRDRVHMVVFAYDAGLVHPRG
>NZ_LT576042.1|WP_044636672.1|2432782_2433784_+|IS481-family-transposase
MTHANAPLTPEGRRRLAVLVVEQGWSLRRAAERFQCSPATVKRWADRYRAGLPLIDRSSRPTSSPNRLSRKTEHRIVALRFTRRWGPHRIAYHLRLHRSTVGRVLARYKMPKLINIDQATGLPVRRPKPKRYEVAAPGQLVHVDIKKQGRIPDGGGWRAHGRGSMQDRHAGVARDKAARAGAAGSRGYRYLHHAVDDHSRIAYSEILDDERKETAAGFWTRANAFFAGLGVTVTAVMTDNGSCYRSGAFADALGDEVKHKWTRPYRPQTNGKVERFNRTLAVEWAYAKPYASEAERAAAYETWLHHYNHHRPHTGIGGQTPSARVHNVTGKYS
>NZ_LT576042.1|WP_036942942.1|2433780_2434218_-|hypothetical-protein
MSSYILRPRIPRRAFVLGSAATVVGLVLVVIGLVQNWAILAIIVLAALLAVGLLTLLMVAYSMVNHRIHIDLDAKGYRVHGPGMDRRGTWAKVTRVAVTPDGSRLMIASGPVKRTYISCPKGGDDPAMQALIKEISAHLPEHSRR
>NZ_LT576042.1|WP_013160075.1|2434467_2435439_+|NAD(P)H-quinone-oxidoreductase
MHAITVDEPGGVDVMSWAEVPIPDPGPGEVLVRTQAAGVNRGDVLQRQGHYPPPAGITDIMGMEALGVIEKLGDGVEGHQVGEQVLALVSGGAYAEFFVVPAGQLLKLPAGIDPLAAAGLVEVAATVVSNFDRVHLSAGETVLIHGGAGGIGTLAIQYAKALGAHVIVTAGSAKKLAYCRKLGADEGFDYHDDWEPQVMMATQDRGVDVILDIVGAKYLEANVRCLADDGRLVIIGMQKGTKGTLNIAVLLNKRGTVTATSLRFRSLASKAAICRRVEEAIWPLLSSGAIKPGNQTQVPMAHASKAHELLESGDNTGKIILVV
>NZ_LT576042.1|WP_036943004.1|2435612_2437037_+|argininosuccinate-synthase
MSKVLTSLPVGQRVGIAFSGGLDTSCAVAWMREKGAIPCTYTADIGQYDEPDIASVPGRAGQYGAELSRLVDCRESLVEEGLSALACGAFHVQSAGRAYFNTTPIGRAVTGTLLVRAMNDDNVSIWGDGSTYKGNDIERFYRYGLMANPSLRIYKPWLDEDFVSELGGRDEMSVWLQKRNLPYRDSKEKAYSTDANIWGATHEAKTLEHLDVSLETVEPIMGVKFWDPSVTIDTEDVTIGFEQGRPVTINGKKFDSAVDLVLEANKVGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLFIAYERLVNAIHNEDTIINYRNEGMRLGRLLYEGRWLDPQSLMIRESIQRWVASVVTGEVTLRLRRGEDYTIVNTDGPAFSYHPERLSMERVQDAAFGPLDRIGQLTMRNLDISDSRSRLEQYASQGQLTGGEAAKLVGALEPGKASEIADHPEHAGTSHATPLDNAAMETGAD
>NZ_LT576042.1|WP_036943006.1|2437691_2439218_-|LCP-family-protein
MALVLFVVVAAAGIYIWRANAGIKRSGAIADKTSQSSDLDLLVMGLDSRVDVNGNALPSDIYDALHSGDASDGGLNSNVLMYVHVPADGSQASVFAIPRDDYVDFPGCPDGVCKGKIKEAYGYAADAKTQELDKQGKTGQDAYQQARDAGRAAEVRTVEQFLGVEIDHFIEVTMVAFFQIAQVVQPITVCVNEKTVDTYSGADFKAGEQDINAEQAMAFVRQRRDTDNPDLAFTDLDRSRRQQAFIASLLVKLKKTNLLTNPGQLDKLVQVAQQNTVLDKNLKISQLTSLATSLEGSKLNFYTLPVESFGTADDGAAINVVDKAKIQGIVRSILHPGQSASPSASASASGSASYSPTYGMGATVSVMNESGVTGAAASLVGQLTGFGFTAGQATNGADILQESSVSYGSAVAGQAKQLAQQLGGLSANADSTLGANAVVVHMGTGFTGWPSASPSAASSAASTGGSSVSPSASSTAIPSAVDANSGGQSGPEPSQLTQISGGGIPCVK
>NZ_LT576042.1|WP_013160072.1|2439601_2440348_+|NAD-dependent-protein-deacylase
MSADQLSRILAPADHVVFFGGAGVSTESGIPDFRSATGLYKTQSGGEFPPEYMLSHSCWADHPEDFYAFYRKNMLHPEAKPNAAHYALARLEKAGRLTAVVTQNIDGLHQMAGSQKVFELHGSVLRNHCVDCHRSYPVEAIEQSTGIPRCTVCNGIIKPDVVLYEEGLDPDVMDGATRAIMAADVLIVGGTSLNVYPAAGLLEYYRGDKLVLINKSATPADNRAQLVIHDSIGKVLGQAVDEVLGDKA
>NZ_LT576042.1|WP_013160071.1|2440515_2441013_-|thiol-peroxidase
MSTTAFQGTPVHTVGELPAVGSQAPDFELVGKDLSTITLKSLRGRRVVLNIFPSLDTGVCATSVRTFNKLAAGLDNTTVLAVSKDLPFAAERFCVAEGIENVVPASAFRKHSFSNYGVLMTDGPLAGLLARSVVVIDENGTVVYNQLVPEIGNEPDYDDAVAALK
>NZ_LT576042.1|WP_013160070.1|2441345_2441993_+|CueP-family-metal-binding-protein
MSRRFATTLAASALSLVVLAGCSTATAGPSSGTPSGTVTAGAASNTSSTAANGSVDVAKAGVEELKGADARTLVDKLEATPLSQRRTDLRASVRADELQLSDTSGNKASVKMPADQFYLSFAPYVNKTHDCTYHSLTTCKAELGNKQMHVTITDAAGATVIDQDLTAADNGFIGVWLPRNITGTLTVSYDGKSASQQISTAKADDPTCLTTLHLA
>NZ_LT576042.1|WP_013160069.1|2442054_2443176_-|HAMP-domain-containing-histidine-kinase
MLTRRSIARRFLTGAAVVVGVAVVTIFVVDALVSPAIFHAHLMQADLSNPETVLRHVEEGMRSSNMIALAVAILIAVLAALLVSLYLATRVSASLAPLAAAARQVAAGDYTARVDAGPLGAEFDELTEAVNAMSQRLASVEQSRTRLFSDLAHEMRTPIAVVQAQLEGIEDGVVGVEDSIPVLRAQAERLTRLSSDIGLLSQAQEHALRYEFAPGEVASVVRGCVDDMALRYREAGVQLTLDVATHARAQLDTARFAQVITNLLANALNATVSAGRGRTGDRGGHVHVGVRRHGNEVAVQVRDDGVGISPEELPHVFDRFARVGPARDRSSGGFGIGLTVARAIMSAHHGRISADSPGPGRGATFTVTVPVLH
>NZ_LT576042.1|WP_041704379.1|2443340_2444018_-|response-regulator-transcription-factor
MIVEDEHSLATVMAGYFTRNGYRAEVVGDGLEAVAAARRLDPSVVILDLGLPSLDGVEVARRIRTFSDCYILMLTARADEVDELIGLSVGADDYLTKPFSPRLLIARVQAMQRRPRSAITPPDEQPLRIGELTIDPAAREVQLGTREIALTRTEFDLLAHLARNPRRAISRDELIEAVWGVGWSGDDQLVDTHIGHLRKKLGDSAANARFIETVRGVGYRMGQGR

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Crispr_ID: NZ_LT576042_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT576042_6

2598309-2598409

Orphan

Consensus_repeat	Method
ACCGGCCCCGAGAACGGACGCGTCGGCTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT576042_6

>merge|NZ_LT576042|6|2598309-2598409|CRISPRCasFinder
ACCGGCCCCGAGAACGGACGCGTCGGCTCATCCGAGGGCAACTGCACCGTCGGATCAGCCGGATAACCATTCACCGGCCCCGAAAACGGACGCGTCGGCTC

>NZ_LT576042|6|6|2598309-2598409|CRISPRCasFinder
ACCGGCCCCGAGAACGGACGCGTCGGCTC	ATCCGAGGGCAACTGCACCGTCGGATCAGCCGGATAACCATTC
ACCGGCCCCGAAAACGGACGCGTCGGCTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT576042.1\|WP_055344933.1\|2600744_2601350_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_055345674.1\|2594991_2596206_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_LT576042.1\|WP_158304168.1\|2593379_2594228_-\|low-temperature-requirement-protein-A	unknown	unknown	gnl\|CDD\|377704
NZ_LT576042.1\|WP_013162193.1\|2592280_2592700_-\|DUF5318-family-protein	unknown	unknown	gnl\|CDD\|379953
NZ_LT576042.1\|WP_036942692.1\|2585970_2587245_-\|alpha-amylase	unknown	unknown	gnl\|CDD\|200491
NZ_LT576042.1\|WP_013162208.1\|2608747_2609665_-\|Dyp-type-peroxidase	unknown	unknown	gnl\|CDD\|273607
NZ_LT576042.1\|WP_097776008.1\|2601862_2603809_+\|purine/pyrimidine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_LT576042.1\|WP_055345673.1\|2588497_2590135_-\|DUF2029-domain-containing-protein	unknown	unknown	gnl\|CDD\|227937
NZ_LT576042.1\|WP_013162199.1\|2596538_2597393_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381297
NZ_LT576042.1\|WP_055343599.1\|2605386_2607054_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341286
NZ_LT576042.1\|WP_157761614.1\|2610282_2612235_+\|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl\|CDD\|270691
NZ_LT576042.1\|WP_057374977.1\|2612701_2613472_-\|PLDc-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|236090
NZ_LT576042.1\|WP_013162192.1\|2590152_2592288_-\|penicillin-binding-protein	unknown	unknown	gnl\|CDD\|223815
NZ_LT576042.1\|WP_013162197.1\|2594695_2594932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT576042.1\|WP_036942712.1\|2607194_2608643_-\|catalase	unknown	unknown	gnl\|CDD\|365942
NZ_LT576042.1\|WP_044636488.1\|2584732_2585941_+\|RtcB-family-protein	unknown	unknown	gnl\|CDD\|376465
NZ_LT576042.1\|WP_013162190.1\|2587346_2588501_-\|GPI-mannosyltransferase-2	unknown	unknown	gnl\|CDD\|282094
NZ_LT576042.1\|WP_097776007.1\|2598898_2600680_-\|glycoside-hydrolase-family-13-protein	unknown	unknown	gnl\|CDD\|200471
NZ_LT576042.1\|WP_081012520.1\|2603856_2604858_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223730
NZ_LT576042.1\|WP_013162211.1\|2613555_2614812_-\|chloride-channel-protein	unknown	unknown	gnl\|CDD\|238505

Protein	Function_ID	Function_description	E-value
NZ_LT576042.1\|WP_057374977.1\|2612701_2613472_-\|PLDc-N-terminal-domain-containing-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	4.8313e-09
NZ_LT576042.1\|WP_055345674.1\|2594991_2596206_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.65837e-69
NZ_LT576042.1\|WP_158304168.1\|2593379_2594228_-\|low-temperature-requirement-protein-A	gnl\|CDD\|377704	pfam06772, LtrA, Bacterial low temperature requirement A protein (LtrA). This family consists of several bacteria specific low temperature requirement A (LtrA) protein sequences which have been found to be essential for growth at low temperatures in Listeria monocytogenes.	2.86683e-31
NZ_LT576042.1\|WP_013162193.1\|2592280_2592700_-\|DUF5318-family-protein	gnl\|CDD\|379953	pfam17249, DUF5318, Family of unknown function (DUF5318). This family of unknown function is mostly found in Actinobacteria.	2.89979e-39
NZ_LT576042.1\|WP_036942692.1\|2585970_2587245_-\|alpha-amylase	gnl\|CDD\|200491	cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_LT576042.1\|WP_013162208.1\|2608747_2609665_-\|Dyp-type-peroxidase	gnl\|CDD\|273607	TIGR01413, Probable_deferrochelatase/peroxidase_EfeN, Dyp-type peroxidase family. A defined member of this superfamily is Dyp, a dye-decolorizing peroxidase that lacks a typical heme-binding region. A distinct, uncharacterized branch (TIGR01412) of this superfamily has a typical twin-arginine dependent signal sequence characteristic of exported proteins with bound redox cofactors.	5.16298e-57
NZ_LT576042.1\|WP_097776008.1\|2601862_2603809_+\|purine/pyrimidine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	1.59164e-168
NZ_LT576042.1\|WP_055345673.1\|2588497_2590135_-\|DUF2029-domain-containing-protein	gnl\|CDD\|227937	COG5650, COG5650, Predicted integral membrane protein [Function unknown].	7.58247e-13
NZ_LT576042.1\|WP_013162199.1\|2596538_2597393_-\|aldo/keto-reductase	gnl\|CDD\|381297	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. The family includes AKR1A/B/C/D/E/G/I, AKR2A/B/C/D/E, AKR3A/B/C/D/E/G, AKR4A/B/C, AKR5A/B/C/D/E/F/G/H, and similar proteins.	3.06815e-116
NZ_LT576042.1\|WP_055343599.1\|2605386_2607054_+\|AMP-binding-protein	gnl\|CDD\|341286	cd17631, FACL_FadD13-like, fatty acyl-CoA synthetase, including FadD13. This family contains fatty acyl-CoA synthetases, including Mycobacterium tuberculosis acid-induced operon MymA encoding the fatty acyl-CoA synthetase FadD13 which is essential for virulence and intracellular growth of the pathogen. The fatty acyl-CoA synthetase activates lipids before entering into the metabolic pathways and is also involved in transmembrane lipid transport. However, unlike soluble fatty acyl-CoA synthetases, but like the mammalian integral-membrane very-long-chain acyl-CoA synthetases, FadD13 accepts lipid substrates up to the maximum length of C26, and this is facilitated by an extensive hydrophobic tunnel from the active site to a positively charged patch. Also included is feruloyl-CoA synthetase (Fcs) in Rhodococcus strains where it is involved in biotechnological vanillin production from eugenol and ferulic acid via a non-beta-oxidative pathway.	7.49605e-101
NZ_LT576042.1\|WP_157761614.1\|2610282_2612235_+\|AarF/ABC1/UbiB-kinase-family-protein	gnl\|CDD\|270691	cd05121, ABC1_ADCK3-like, Activator of bc1 complex (ABC1) kinases (also called aarF domain containing kinase 3) and similar proteins. This family is composed of the atypical yeast protein kinase Abc1p, its human homolog ADCK3 (also called CABC1), and similar proteins. Abc1p (also called Coq8p) is required for the biosynthesis of Coenzyme Q (ubiquinone or Q), which is an essential lipid component in respiratory electron and proton transport. It is necessary for the formation of a multi-subunit Q-biosynthetic complex and may also function in the regulation of Q synthesis. Human ADCK3 is able to rescue defects in Q synthesis and the phosphorylation state of Coq proteins in yeast Abc1 (or Coq8) mutants. Mutations in ADCK3 cause progressive cerebellar ataxia and atrophy due to Q10 deficiency. Eukaryotes contain at least two more ABC1/ADCK3-like proteins: in humans, these are the putative atypical protein kinases named ADCK1 and ADCK2. In algae and higher plants, ABC1 kinases have proliferated to more than 15 subfamilies, most of which are located in plastids or mitochondria. Eight of these plant ABC1 kinase subfamilies (ABC1K1-8) are specific for photosynthetic organisms. ABC1 kinases are not related to the ATP-binding cassette (ABC) membrane transporter family.	7.95577e-89
NZ_LT576042.1\|WP_013162192.1\|2590152_2592288_-\|penicillin-binding-protein	gnl\|CDD\|223815	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane].	1.1429e-120
NZ_LT576042.1\|WP_036942712.1\|2607194_2608643_-\|catalase	gnl\|CDD\|365942	pfam00199, Catalase, Catalase.	0
NZ_LT576042.1\|WP_044636488.1\|2584732_2585941_+\|RtcB-family-protein	gnl\|CDD\|376465	pfam01139, RtcB, tRNA-splicing ligase RtcB. This family of RNA ligases (EC:6.5.1.3) join 2',3'-cyclic phosphate and 5'-OH ends. They catalyze the splicing of tRNA and may also participate in tRNA repair and recovery from stress-induced RNA damage.	4.06446e-167
NZ_LT576042.1\|WP_013162190.1\|2587346_2588501_-\|GPI-mannosyltransferase-2	gnl\|CDD\|282094	pfam04188, Mannosyl_trans2, Mannosyltransferase (PIG-V). This is a family of eukaryotic ER membrane proteins that are involved in the synthesis of glycosylphosphatidylinositol (GPI), a glycolipid that anchors many proteins to the eukaryotic cell surface. Proteins in this family are involved in transferring the second mannose in the biosynthetic pathway of GPI.	1.11536e-07
NZ_LT576042.1\|WP_097776007.1\|2598898_2600680_-\|glycoside-hydrolase-family-13-protein	gnl\|CDD\|200471	cd11332, AmyAc_OligoGlu_TS, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), trehalose synthase (also called maltose alpha-D-glucosyltransferase), and related proteins. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Trehalose synthase (EC 5.4.99.16) catalyzes the isomerization of maltose to produce trehalulose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_LT576042.1\|WP_081012520.1\|2603856_2604858_-\|alpha/beta-hydrolase	gnl\|CDD\|223730	COG0657, Aes, Esterase/lipase [Lipid metabolism].	1.51647e-15
NZ_LT576042.1\|WP_013162211.1\|2613555_2614812_-\|chloride-channel-protein	gnl\|CDD\|238505	cd01033, ClC_like, Putative ClC chloride channel. Clc proteins are putative halogen ion (Cl-, Br- and I-) transporters found in eubacteria. They belong to the ClC superfamily of halogen ion channels, which share a unique double-barreled architecture and voltage-dependent gating mechanism. This superfamily lacks any structural or sequence similarity to other known ion channels and exhibit unique properties of ion permeation and gating. The voltage-dependent gating is conferred by the permeating anion itself, acting as the gating charge.	7.04048e-81

>NZ_LT576042.1|WP_013162199.1|2596538_2597393_-|aldo/keto-reductase
MILNETFDLSNGEKIPKLGLGTWFIDDDRAAQAVRDAVQIGYRNIDTAQAYGNEQGVGEGVRTADVARDQLFVSTKLAAEIKDFDQAVAAIDGSLAKLGLDYVDLMMIHSPQPWNDFRGGNYDEGNREAWRALEKAHHEGKVRSIGISNFLKEDIDNILTSARVAPQVNQLLVHIGNTPQELMDYCTSKDILVEAYSPMAHGEMMGNERVRDIAEDNHVTVPQLSIRYALQLGTVPLPKSANPDHMRANAQVDFVISDDDMATLRGLDQTDYGKYSKFPVYSGK
>NZ_LT576042.1|WP_055345674.1|2594991_2596206_-|cytochrome-P450
MTSDTPSRDNPAPHEPQSYEWDPRAPEVLDNQIAAYDALRARCPVAHSEQMGWSLLRHDDVLRAATQTRTFSAVVSKHVAVPNGMDPPEHTVYRTIVDRYFTQEVVDAFEPACRAIAADLIAALPRDKPADIVNDLAEPFALQVQSAYLGWPERLREPLREWTLSNRRATASGDRAATAAVAEQFDGYITGLLDERRAMGDAAPDDLTTRLMKEQVDGRVLDDGELVSILRNWTVGELSTISAAAGIVVDHLAEHPDVQSLMRAKAGSPATLDDAVDEILRIHPPLISNRRVVAEPTQIGGRQFEPGERLTILWASANRDEDVFGDPHEFRLDRPREDNLLYGAGIHACPGAPLARLELRMLTQELLAATGTITPDRGATSQYASYPASGFAELSVILGSVTEG
>NZ_LT576042.1|WP_013162197.1|2594695_2594932_+|hypothetical-protein
MNDIVANLSAQPILGVGTVLFVIGLGFAVLFGLSFRIRAVLNKRAWNGPTGPFFILMLLTLIPGIALIGLQLWLSQGH
>NZ_LT576042.1|WP_158304168.1|2593379_2594228_-|low-temperature-requirement-protein-A
MFAVTQVIDLIFHEHGAEGVLHGLILVGMLWWTWCTFVWLGNQLRADVGLGAVGRETALFAIAMLGEWLSVYLTSRHGSWRIYSASPWTERFELFVLIVLGESLVAVGVGAGEHPLTIPLLLAAGLGVVLAICLWWLYFDLVAAATGRRVAELAGTERIRIAFEAYVYGHFPLVAGVLLAAVGVEGALRLAGTDESLGAFYGLCLVGGVALHLIGHLIFDRRVQRARSVARACALVILVGLAPAIIRLPALGGLAAVTMVLVVLVVFERLYFTELRRQSRDA
>NZ_LT576042.1|WP_013162193.1|2592280_2592700_-|DUF5318-family-protein
MQTERHRIDYALQRRATLEAMRRPDRVMMEADPCDADPRLISSALHHGTPAGRECPVCASDRMAVLRYVFGDQLGQYSGRIRQPAELEEMEHQFGEFTVRVVEVCPDCGWNFMIASYVLGDGRKRRAPRHKQTVEDIYG
>NZ_LT576042.1|WP_013162192.1|2590152_2592288_-|penicillin-binding-protein
MADRKKSRKPRRALAPSASQRHGPHRTKKKASRARRVVTAIAITLATLMIVGVLGSLIFYARVKLPDPNADFNSQTSTVLFRDGSTKLGELAIQNRTMVDYSAMSDNVKAAVVAAEDRSFWSNKGVSPKGIVRSLFQIARGKDLQSGSTITQQYIKIRYLTSKQTMSRKLTELALAVKMNREVSKDEILAGYLNTVYFGRNAYGVEKAATTYFGTNAAGLNVPQSAMLSALVNSPSTLDPANGDDAKRDLTERYDYVLDGMLEAGKISQADHDANYDKLPDTLPVTQSDLYGGTNGFLLTMAEQELRKAGFSEEQIDGGGLTITTTFDQKMQDAAVKTATDNVSTAIRKAKTNQDASTLHAAVASIGVGTGEVYALYGGPDFLKSQINWATTARPAASTFKAWALVAGLRNGFTLNSTLTGSTFTPNGDNVVVRNDGGVNYGSVTLQKATSYSMNTAFTDLEQRMPNGPADTVKAANDAGVPTGDGWDLNNRIALGTGQVSPVDNATGFATLANDGQRNTTHVVKEVKDASGKVVYTGDTSATQTIDASLVHNAQTALESVVTSGTGTEARQLGRQVIAKTGTKDVDDQTVSAWFVGATKQISTAVMFVAGDGNANLDPYAASGAFESDSYPAYLWEDYMEQASQGMDRLNFNTNAPTQAASVRPSVRRTPTPSVTASATPEAPAANEPAVDVPTAPPASPEPAPAGTAGP
>NZ_LT576042.1|WP_055345673.1|2588497_2590135_-|DUF2029-domain-containing-protein
MEEPAPEGGPGKTVPKGGSGDAAPQESAPARSNLPTISVRLSNRIGGPLGRHARPGGLWFDPAPWALLLSTINWVLLLWRQAPCQQYTFGKPVNPFLRLCYSDIPVFFQNNGIGSGAGIYSDAASPLPVLVGYLASLDRFIIRLLGAGVGPDASGQAQLDSSYMFFVLAAIGLFCAFLALVLAHLQMGRDSFSDATRGVRVRSFDALLIAIAPVVFTGGLISWQLMPVALTSLAVWAWARKLPVVSGVLFGLAVGADAYPVLVVLAVVVLCIRAARMREALRMLVPGIVAWVALNLPVVITAPHGWTAYWSTVLGGGSGVGSFWYALQLLGVSGTLLGVVASVFVVIAVLAVVWLVFTAPRRPRLGQVAFLLVAAVAVFGPHYSPQYALWLLPLLVLARPKVLDWAVWNVAEVLYWLAIWGYLEGILGAGSGADALYWLAVLLRIGVVLWVASRVIGDMFSPWNDPIRRPFVDDPVGGVLDHAVDAPWLAEAESDRKKQAADQSGPVDEQGASEQVAATATMPAPATTSDADMPGPGTRDEESGQ
>NZ_LT576042.1|WP_013162190.1|2587346_2588501_-|GPI-mannosyltransferase-2
MSTTATRTSPALRSRTVAIVAAWLATRLVMGAALLLAMRQSGLTPARALGNWDVQHYMLIATSGYADPKEMAFFPALPMVMRLLDAVGVPMAIGAAAVSQLASLVAAFAMERLGGLNAAIVWLLAPMAVFTTVGYTEALFCAVAFWAWVLARRGRWGWVAVLASVACLTRISGLFLVGGLGLLALFGGEPTVAGAEPAKRVGSWSQRLRNLAWLVVPLAVLAAFAVYLYTLSGHWDSWLSAQRAGWQREWTSPWDSLHNTLAATNEARWPTETTRAWIFRFEIVSMAIGCLTALGCLVRRAWAQAGYVAVQVFAFSIATWFMSVNRADLLWFPLFIGVGSWLGRRPHGATARTVRTAVVGVLIAAALLLMFWWARLFYLGHWAS
>NZ_LT576042.1|WP_036942692.1|2585970_2587245_-|alpha-amylase
MHVSDWRRDVIWWTVYPLGFTGAPTHLDEQAPVAHRLPRLENWLDYLIDLGCNGLVLGPIFRSESHGYDTLDYFAIDPRLGDDADFDALVAACHARGIKLVLDGVFNHVSARYPALRQALAEGPDGPLADMFHIDFSTTPPTRLNFEGSDDLVRLNHASPQVRKLVTDVMLHWCGRGVDGWRLDAAYAVDPEFWAPVLATVRERFPELYIYGEVIHGDYAQIVHESGMDAVTEYELWKACWSSLATENFYELEWTLGRHNEMLDDFRPFTFIGNHDVTRIATKVGADKAILAAVLLGTVGGTPCVYYGDEQAFRGEKYDRPGGDAEVRQPMPERPDQLAGFGLPTYRAYQAILAIRRRYAWLPDARTEVESITNPRIVYRAHDPADADHWVRVTLDVTDTPTASVVDNSGELFHWPHRGGRRGV
>NZ_LT576042.1|WP_044636488.1|2584732_2585941_+|RtcB-family-protein
MTELPVPVPGTTSDTLMWADPTTVEPEALDQLRAISRLPWLAKLRVMPDVHLGKGATVGSVIAMRDAVSPAAVGVDIGCGMVAARTNLTVDDLPDSLHAIRSRLEELVPVGWKSHTGTAPVLSRDEQLKGRFTTLFDRFGQLRAPHIDDRETRALSQSGTLGGGNHFLELQADDTGTVWLMLHSGSRNIGKELADRHITEAKGLDHNLDLPDRDLAVFLAGTPEMDDYLHDLYWAQEYARLNRDIMMRTFKGVITEFFPHATFDHDVNCHHNYVSQECYDGVDLIVTRKGAIFAGSGTLGLIPGSMATGSYVVRGLGNATGLCSASHGAGRRMSRRAARRTFTVDDLAAQTAGVESRKDEGVLDEIPGAYKDIDAVIHDQTTGPSPLVEVVARLRTLLCVKG
>NZ_LT576042.1|WP_097776007.1|2598898_2600680_-|glycoside-hydrolase-family-13-protein
MSTPSAGSNGRPTARQSAGKQPVARQSVADPSKAWWRDAVIYQVYPRSFADSDGDGMGDLGGVREHLGDLEALGVDAVWLSPFFPSPQADAGYDVADYRDVDPLFGTLDDFDALLAGAHQRGLRVVIDLVPNHTSSKHVWFTAALAAAPGSRERNRYVFRDGRGEHGELSPNNWPSQFGGPAWTRVDDGTANPQWYLHLFDAGQPDLNWDNPDVIDEFQDILRFWLNRGVDGFRVDVAHGLVKQQGLPDVASGEHDALSRLDDPRWDQPGVHDIYRGWHRVLEGFGGDRMLVAEAWVADATRRALYVRPDEMQQAFSFGYLMAGWDAGAVRHAIDDALGANDAVGATTTWVLSNHDVVRHASRLGYPVPASDQGAPAPSWTNGIGPDDPKPDDELGLSRARAATLGMLALPGSAYLYQGEELGLPEVTDLAPEVRQDPEFLRTAGAVIGRDGARVPLPWDSGAPAFGFSPSGRSWLPQPASFADYAANEQRGHPGSTLEMYRAAIDLRRTHRLGTGRMHWNEADPGVLDFTNGEVRVVVNMSRSPQPLGDHVLGDQASGDQATRDRALLLESSPGSVIDGQLQPDRCVWLLVG
>NZ_LT576042.1|WP_055344933.1|2600744_2601350_-|hypothetical-protein
MRKFKARFVWAGVAVAAVVGVSAAWVAGSVGPGTAQSRPVAAGMTAEQLLTLEPASNASGGDQSVDASGNGQAPVPRAGQDTPSSPAEGQVSAQVRHYFDVDPGTALPPDATISPDPSSWRKIDDKTAVMRVDVLTPGAAATPYAAVMAEQGGEWKVMGTLNVDETPTPTPTPEENAEPSAPASSPAKGAPASAAVPSPTP
>NZ_LT576042.1|WP_097776008.1|2601862_2603809_+|purine/pyrimidine-permease
MSLTATAPAVKDPVDRVPPIPKLTILGLQHVLAFYAGAVIVPLVIAQGLGLDSATTIHLINADLFTCGIASIIQSAGLGPKIGVRMPLLQGVTFTAVSPLIAIGLAGGGGVGGLATMYGSIIVAGLATFFVAPFFAKLLRFFPPVVTGTLLTIMGTTLLSVAANDIVSWGTAAAKAGGSPISGTMRGLIYALGTLAVIVLVQWLFKGFMATISVLIGLVAGTVVAIFLGDADFSGVGQAAAFGVTTPFFFGMPKFSVGAIISMLIVMAITAVETTGDVFATGEVVGKRITSKHVANALRADGLATTLGGVLNSFPYTCFAQNVGLVRLTRVKSRWVVTMAGAIMIVLGILPKAGAIVDAIPTPVIGGASLAMFASVAVVGIQTLGKADMHDNRNAVIVSTSIGLALLVTLKPDLAGMVPSWLSIFFGSGVTFGSIVAIVLNIAFFHIGPHRSPDVARSKKGRNVSLDQVNRMGKDEFVDTFGELFSGTTWPVESAWELRPFNSTTELRQAFEDSVLTAEPSCQKDLVRGYFDIADLVSDENGDLQAQIDTGSVALDRMDNVQRQEVRAASHAYRDRFDMPMVIAVENLASREQLVKDAWRRVEHSPELERRIAVAQVVAIADNRFTKLVADANPIRNAWSRKFEQLDE
>NZ_LT576042.1|WP_081012520.1|2603856_2604858_-|alpha/beta-hydrolase
MRVTTESLSDTATLTSYLLDDAPTTHAVDPTMPPRPAVLVLPGGAYLEIAEREAEPVAAAYLAQGFNAFVLRYAVGADVPFEASLADATAALLRIRSGAEEFGINPHRIACAGFSAGGHLALALGTIAEEAPDALVLGYPVTMAQMGRPLGQRIPDLVGAITPDTPPIFVFATCGDPMVPVRNTLDLIAELDSHLVPFESHVYLLGGHGLSLATPASSGGQAHNVEPGAAEWFADSVRFLHTVFVDVELAGSQPGYDTLLVRRRLGVHMPLRNLVADERAVHVMAAAAPALTLAVQDGELSLLVSPAQVAQQSPDLIDRETLDRLQVSLDELN
>NZ_LT576042.1|WP_055343599.1|2605386_2607054_+|AMP-binding-protein
MNESLDALQPTMFREVFDHHFTWASGFERNIHRYADRPAMTDLPSGRHWTYAELGRDTGRLVAGLAARGVGKGDLVAYQLYNCPEFAMLYVAAQGLRAVSSPSNFRLAAGELAHVFDQTRPKVFVYDVRLADQVAHALELADFNPQTLAGVGSGELLPGAIRFDELFADEAPSFHAPDDASTWDWTSLLFTSGTTGMPKPVPLTSLNEVLTAHDVIMHFPLNAHESSLNMSPWFHRGGNYCAGPNTMFYLGGEVVIMPKFDADAVLDTIAERGLAYVVGAPTNLERLADAQERRPRDLSSLSGIVTMGAPLERAAALRYQRVLSPRIANGYGTTEGFWNTYLRPYDLPEGSGTAGHACLDDDVAVVRLFDDRTAAPDELAAKDNKEVGEVVMRTPKAGYTYLGHDAEAADKFRDGWIYPGDLATWDETETLTIVGRKDDMVISGGENVHPVQVEEILDADEQVADSLVTGLPDKEWGQVVVAYVVPEPGAFTDHQQAARHLDQLCRDAATLANYKRPRLYAFVDALPMTATGKKQHYKLHERTTADAAKGLFVRP
>NZ_LT576042.1|WP_036942712.1|2607194_2608643_-|catalase
MPIDPKASPTQENGAPAASEEHSLTVGADGPIALHDVHLVETLAHFNRERVPERSPHAKGSGAFGTFTVTGDVTAYTKADFLQPGRSTPMLARFSTVAGEQGSPDTWRDVRGFALKFYTQQGNFDMVGNNTPVFFMRDPMKFPHFIRSQKRLPDSGLRSPNMQWDFWTLSPESAHQVAYLMGPRGLPATWREMNGYSSHTYSWINAGGELFWVKYHFISAQGVRNMTAAEAAEIAGDNADFHRQDLFDAIADGDFPSWDVKVQVMPYDDAREYRFNPFDLTKVWPHGDYPLIDVGRFTLDRNPDNFFAEIEQAAFSPSNYVPGTGISPDKMLMGRVFAYNDAARNRIGANFEQLPVNRPVIPTNAYTFDGQMRFDHSGAAPVYAPNSAGRPWAEGGGRAEDSWESDGDLVRASATLHSSDDDFGQAHALVRDVFSEEDRAQLVNTIVDQIVNTDVVEPVRSRIVEYWTKIDAEVGADIAGRI
>NZ_LT576042.1|WP_013162208.1|2608747_2609665_-|Dyp-type-peroxidase
MPTESAPIGAPQPGILAFGTTHHAYLEFDLTVDASTEVLRGVVGALDESLVTGAGSMAVVGFRPEMWAKLVPEHVLPGLAGFNRPLRGLDDFTMPATQHDVAIWVQGGAQDAVFDLSRTLINAVSTWATLADETEGWVYHHHRDLTGFVDGTENPHLSQLPGVVQVPDGPAAGGSVLLLQRWPHDVQAWESLPVADQERVIGRTKETDAEFDPKPPSSHIARTDQDDLGDILRRNTAFGTASAHGTMFVGIGAGSDVMQKMLDQMAGVDGLRDALTFYSHPETGGYYYLPSVEQLDPYRPDLSEE
>NZ_LT576042.1|WP_157761614.1|2610282_2612235_+|AarF/ABC1/UbiB-kinase-family-protein
MPAPLLELLVLALLAVAMAEVAKRIITGVSFVRRFVASLLVFLLTLPAGTWVMEQTRIVTPDGTLQVSWPIFLLVMVLCFVWVFAAALTGLVVLEMVLPSGSMPSPIQSARDIRMALRRHRRYLQLGWIAMSSGLWKALRKGPDSPGFGEALVKMLNRSGVTFIKLGQVLSTRPDVLPNTVMTALSSLWDTAAPAPEQNIRTMLRSQWGRDPEEVLGSFDDTPFAAASIAQVHRATLKDGTAVVIKVQRPGAAEQVVVDSDILLRFTRLAEQRFAWARAMGVDALGRGMTAALKEELDYRREARNTKAIAATLADNPAITTPVVNQELTREKVLVMSPVNGSSLASKVDTLDDDTRHELARTLMTATLQGILVHGIFHADLHPGNILLLDDGRIGLLDFGSVGVIDAETRQLIAALLVAFVADDNSAATTAVTAAFDVGDEVDRMALQRDLGRALTLLTHTGDESAATLNEFFTVMRDYRITIPGDVAGAFRTLTSLEGTLTALSADYGLLAGAEDAMPSIITKLAAPKQLAMIAATTTMTSALLARRLPARTEQITDLLARGQYTLNTRMLSDRSDRQWLRSRLDDAMSSLFAAVAVVLAVVFIVIPGGPAITSTLTGYDLAGAAIGCVGLVLILRLVVRLFTRYSGRP
>NZ_LT576042.1|WP_057374977.1|2612701_2613472_-|PLDc-N-terminal-domain-containing-protein
MLTPLDTNFLDGISVGVFLIILAIPAILWVITLVSIITSRNWTPGMKALWALAALPSGLIGMICWFVWGRPEGNKLAIEYYGGQLPTAVAPYGQQIPGTYATQPQQAQAPAAPAPAPAPAQPPADAAPYGTGAFGDGQAAPGAAKYATTQGQRFDAGTAYGATQGFAPGQDSAGQDSAGQDGAGQASAQDATGHSAAAQGAADQPTEPIVPTSQGGAAPQTDAAPRADEASDDGDTRPDIPQVPDNGPDASGKTTN
>NZ_LT576042.1|WP_013162211.1|2613555_2614812_-|chloride-channel-protein
MVVLIVVAGVVAGVIGGLTAEANRLIETLAFGFDFTKSPNGPAGAPWWRRLLVALLGGVACGLIWMRIRPRPGGNLVGVKGASTDPTGTKRLPPLATVLDAFAQMLIVGTGISQGREPAPRQYAAVAAQALARRFRVDVATRGLLIAATAGAGLASVYNVPLAGALYALEEVVRPNLRTRRGWWQVAVAVIISALSTAVSWLFNHRARTYVMPQVRVDVHAYAWAALIAVVALVVGFAFQRALAWIKAHEPDTRRLWWTVPIGAVAVAAIGLWNPQIPGNGQVLVQTVLTGGLLPGALLIACVAKFGATLLSFGAGSNGGVLTPSLAVGASLTMALMGWCHVDAAVGVTVAVVGAACVLTLTQRSPMFSAMFALELTGSGLFTSSAVAWGVGLTWALYLLLPRLARRLRRRGPGPTGA

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LT576042_3	3.1\|2046878\|37\|NZ_LT576042\|CRISPRCasFinder	2046878-2046914	37	NZ_LT576042.1	2424231-2424267	0	1.0

1. spacer 3.1|2046878|37|NZ_LT576042|CRISPRCasFinder matches to position: 2424231-2424267, mismatch: 0, identity: 1.0

ggtgagctaccacgccagccgcctggcctgggcgccg	CRISPR spacer
ggtgagctaccacgccagccgcctggcctgggcgccg	Protospacer
*************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT576042_4	4.3\|2192436\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192436-2192469	34	KX620754	Propionibacterium phage G4, complete genome	34379-34412	0	1.0
NZ_LT576042_4	4.10\|2192944\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192944-2192979	36	KX620751	Propionibacterium phage Doucette, complete genome	25749-25784	0	1.0
NZ_LT576042_4	4.10\|2192944\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192944-2192979	36	NC_041891	Propionibacterium phage B22, complete genome	24335-24370	0	1.0
NZ_LT576042_4	4.10\|2192944\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192944-2192979	36	NC_041894	Propionibacterium phage E6, complete genome	27106-27141	0	1.0
NZ_LT576042_4	4.11\|2193016\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193016-2193053	38	KX620751	Propionibacterium phage Doucette, complete genome	30268-30305	0	1.0
NZ_LT576042_4	4.20\|2193673\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193673-2193706	34	KU984979	Propionibacterium phage PFR1, complete genome	11802-11835	0	1.0
NZ_LT576042_4	4.20\|2193673\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193673-2193706	34	NC_031108	Propionibacterium phage PFR2, complete genome	13371-13404	0	1.0
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	NC_041890	Propionibacterium phage Anatole, complete genome	26179-26214	0	1.0
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	KX620752	Propionibacterium phage E1, complete genome	26179-26214	0	1.0
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	NC_041892	Propionibacterium phage B3, complete genome	25436-25471	0	1.0
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	NC_041890	Propionibacterium phage Anatole, complete genome	26179-26214	0	1.0
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	KX620752	Propionibacterium phage E1, complete genome	26179-26214	0	1.0
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	NC_041892	Propionibacterium phage B3, complete genome	25436-25471	0	1.0
NZ_LT576042_4	4.4\|2192506\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192506-2192539	34	KU984979	Propionibacterium phage PFR1, complete genome	13910-13943	1	0.971
NZ_LT576042_4	4.4\|2192506\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192506-2192539	34	NC_031108	Propionibacterium phage PFR2, complete genome	15479-15512	1	0.971
NZ_LT576042_4	4.21\|2193743\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193743-2193778	36	NC_041890	Propionibacterium phage Anatole, complete genome	6169-6204	1	0.972
NZ_LT576042_4	4.21\|2193743\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193743-2193778	36	KX620752	Propionibacterium phage E1, complete genome	6169-6204	1	0.972
NZ_LT576042_4	4.21\|2193743\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193743-2193778	36	NC_041892	Propionibacterium phage B3, complete genome	6169-6204	1	0.972
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	KX620751	Propionibacterium phage Doucette, complete genome	30286-30321	1	0.972
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	NC_041894	Propionibacterium phage E6, complete genome	31696-31731	1	0.972
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	NC_041890	Propionibacterium phage Anatole, complete genome	29115-29150	1	0.972
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	KX620752	Propionibacterium phage E1, complete genome	29115-29150	1	0.972
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	NC_041892	Propionibacterium phage B3, complete genome	28399-28434	1	0.972
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	NC_041890	Propionibacterium phage Anatole, complete genome	12358-12391	1	0.971
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	KX620752	Propionibacterium phage E1, complete genome	12358-12391	1	0.971
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	NC_041891	Propionibacterium phage B22, complete genome	25306-25341	1	0.972
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	NC_041894	Propionibacterium phage E6, complete genome	28077-28112	1	0.972
NZ_LT576042_4	4.43\|2195324\|36\|NZ_LT576042\|PILER-CR	2195324-2195359	36	NC_041894	Propionibacterium phage E6, complete genome	28766-28801	1	0.972
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	NC_041891	Propionibacterium phage B22, complete genome	25306-25341	1	0.972
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	NC_041894	Propionibacterium phage E6, complete genome	28077-28112	1	0.972
NZ_LT576042_4	4.68\|2195323\|36\|NZ_LT576042\|CRISPRCasFinder	2195323-2195358	36	NC_041894	Propionibacterium phage E6, complete genome	28766-28801	1	0.972
NZ_LT576042_4	4.115\|2194531\|37\|NZ_LT576042\|CRT	2194531-2194567	37	NC_041890	Propionibacterium phage Anatole, complete genome	12357-12393	1	0.973
NZ_LT576042_4	4.115\|2194531\|37\|NZ_LT576042\|CRT	2194531-2194567	37	KX620752	Propionibacterium phage E1, complete genome	12357-12393	1	0.973
NZ_LT576042_4	4.3\|2192436\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192436-2192469	34	KU984979	Propionibacterium phage PFR1, complete genome	33346-33379	2	0.941
NZ_LT576042_4	4.3\|2192436\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192436-2192469	34	NC_031108	Propionibacterium phage PFR2, complete genome	34915-34948	2	0.941
NZ_LT576042_4	4.11\|2193016\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193016-2193053	38	NC_041894	Propionibacterium phage E6, complete genome	31678-31715	2	0.947
NZ_LT576042_4	4.11\|2193016\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193016-2193053	38	NC_041890	Propionibacterium phage Anatole, complete genome	29097-29134	2	0.947
NZ_LT576042_4	4.11\|2193016\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193016-2193053	38	KX620752	Propionibacterium phage E1, complete genome	29097-29134	2	0.947
NZ_LT576042_4	4.11\|2193016\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193016-2193053	38	NC_041892	Propionibacterium phage B3, complete genome	28381-28418	2	0.947
NZ_LT576042_4	4.44\|2195396\|38\|NZ_LT576042\|PILER-CR	2195396-2195433	38	NC_041891	Propionibacterium phage B22, complete genome	7978-8015	2	0.947
NZ_LT576042_4	4.69\|2195395\|38\|NZ_LT576042\|CRISPRCasFinder	2195395-2195432	38	NC_041891	Propionibacterium phage B22, complete genome	7978-8015	2	0.947
NZ_LT576042_4	4.87\|2192505\|37\|NZ_LT576042\|CRT	2192505-2192541	37	KU984979	Propionibacterium phage PFR1, complete genome	13908-13944	2	0.946
NZ_LT576042_4	4.87\|2192505\|37\|NZ_LT576042\|CRT	2192505-2192541	37	NC_031108	Propionibacterium phage PFR2, complete genome	15477-15513	2	0.946
NZ_LT576042_4	4.93\|2192943\|39\|NZ_LT576042\|CRT	2192943-2192981	39	KX620751	Propionibacterium phage Doucette, complete genome	25748-25786	2	0.949
NZ_LT576042_4	4.93\|2192943\|39\|NZ_LT576042\|CRT	2192943-2192981	39	NC_041891	Propionibacterium phage B22, complete genome	24334-24372	2	0.949
NZ_LT576042_4	4.93\|2192943\|39\|NZ_LT576042\|CRT	2192943-2192981	39	NC_041894	Propionibacterium phage E6, complete genome	27105-27143	2	0.949
NZ_LT576042_4	4.94\|2193015\|41\|NZ_LT576042\|CRT	2193015-2193055	41	KX620751	Propionibacterium phage Doucette, complete genome	30267-30307	2	0.951
NZ_LT576042_4	4.103\|2193672\|37\|NZ_LT576042\|CRT	2193672-2193708	37	KU984979	Propionibacterium phage PFR1, complete genome	11800-11836	2	0.946
NZ_LT576042_4	4.103\|2193672\|37\|NZ_LT576042\|CRT	2193672-2193708	37	NC_031108	Propionibacterium phage PFR2, complete genome	13369-13405	2	0.946
NZ_LT576042_4	4.104\|2193742\|39\|NZ_LT576042\|CRT	2193742-2193780	39	NC_041890	Propionibacterium phage Anatole, complete genome	6167-6205	2	0.949
NZ_LT576042_4	4.104\|2193742\|39\|NZ_LT576042\|CRT	2193742-2193780	39	KX620752	Propionibacterium phage E1, complete genome	6167-6205	2	0.949
NZ_LT576042_4	4.104\|2193742\|39\|NZ_LT576042\|CRT	2193742-2193780	39	NC_041892	Propionibacterium phage B3, complete genome	6167-6205	2	0.949
NZ_LT576042_4	4.13\|2193164\|37\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193164-2193200	37	KX620754	Propionibacterium phage G4, complete genome	21495-21531	3	0.919
NZ_LT576042_4	4.14\|2193237\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193237-2193272	36	KU984979	Propionibacterium phage PFR1, complete genome	20837-20872	3	0.917
NZ_LT576042_4	4.14\|2193237\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193237-2193272	36	NC_031108	Propionibacterium phage PFR2, complete genome	22406-22441	3	0.917
NZ_LT576042_4	4.86\|2192435\|37\|NZ_LT576042\|CRT	2192435-2192471	37	KX620754	Propionibacterium phage G4, complete genome	34377-34413	3	0.919
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	KX620751	Propionibacterium phage Doucette, complete genome	30284-30322	3	0.923
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	NC_041894	Propionibacterium phage E6, complete genome	31694-31732	3	0.923
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	NC_041890	Propionibacterium phage Anatole, complete genome	29113-29151	3	0.923
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	KX620752	Propionibacterium phage E1, complete genome	29113-29151	3	0.923
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	NC_041892	Propionibacterium phage B3, complete genome	28397-28435	3	0.923
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	NC_041890	Propionibacterium phage Anatole, complete genome	26177-26215	3	0.923
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	KX620752	Propionibacterium phage E1, complete genome	26177-26215	3	0.923
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	NC_041892	Propionibacterium phage B3, complete genome	25434-25472	3	0.923
NZ_LT576042_4	4.22\|2193815\|35\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193815-2193849	35	KU984979	Propionibacterium phage PFR1, complete genome	27072-27106	4	0.886
NZ_LT576042_4	4.22\|2193815\|35\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193815-2193849	35	NC_031108	Propionibacterium phage PFR2, complete genome	28641-28675	4	0.886
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	NC_041891	Propionibacterium phage B22, complete genome	28880-28915	4	0.889
NZ_LT576042_4	4.94\|2193015\|41\|NZ_LT576042\|CRT	2193015-2193055	41	NC_041894	Propionibacterium phage E6, complete genome	31677-31717	4	0.902
NZ_LT576042_4	4.94\|2193015\|41\|NZ_LT576042\|CRT	2193015-2193055	41	NC_041890	Propionibacterium phage Anatole, complete genome	29096-29136	4	0.902
NZ_LT576042_4	4.94\|2193015\|41\|NZ_LT576042\|CRT	2193015-2193055	41	KX620752	Propionibacterium phage E1, complete genome	29096-29136	4	0.902
NZ_LT576042_4	4.94\|2193015\|41\|NZ_LT576042\|CRT	2193015-2193055	41	NC_041892	Propionibacterium phage B3, complete genome	28380-28420	4	0.902
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	NC_041891	Propionibacterium phage B22, complete genome	25304-25342	4	0.897
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	NC_041894	Propionibacterium phage E6, complete genome	28075-28113	4	0.897
NZ_LT576042_4	4.126\|2195321\|39\|NZ_LT576042\|CRT	2195321-2195359	39	NC_041894	Propionibacterium phage E6, complete genome	28764-28802	4	0.897
NZ_LT576042_4	4.127\|2195393\|41\|NZ_LT576042\|CRT	2195393-2195433	41	NC_041891	Propionibacterium phage B22, complete genome	7977-8017	4	0.902
NZ_LT576042_4	4.86\|2192435\|37\|NZ_LT576042\|CRT	2192435-2192471	37	KU984979	Propionibacterium phage PFR1, complete genome	33344-33380	5	0.865
NZ_LT576042_4	4.86\|2192435\|37\|NZ_LT576042\|CRT	2192435-2192471	37	NC_031108	Propionibacterium phage PFR2, complete genome	34913-34949	5	0.865
NZ_LT576042_4	4.97\|2193236\|39\|NZ_LT576042\|CRT	2193236-2193274	39	KU984979	Propionibacterium phage PFR1, complete genome	20835-20873	5	0.872
NZ_LT576042_4	4.97\|2193236\|39\|NZ_LT576042\|CRT	2193236-2193274	39	NC_031108	Propionibacterium phage PFR2, complete genome	22404-22442	5	0.872
NZ_LT576042_4	4.105\|2193814\|38\|NZ_LT576042\|CRT	2193814-2193851	38	KU984979	Propionibacterium phage PFR1, complete genome	27070-27107	5	0.868
NZ_LT576042_4	4.105\|2193814\|38\|NZ_LT576042\|CRT	2193814-2193851	38	NC_031108	Propionibacterium phage PFR2, complete genome	28639-28676	5	0.868
NZ_LT576042_4	4.8\|2192797\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192797-2192834	38	AF428260	Propionibacterium phage phiB5, complete genome	5484-5521	6	0.842
NZ_LT576042_4	4.8\|2192797\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2192797-2192834	38	NC_003460	Propionibacterium phage B5, complete genome	5484-5521	6	0.842
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	NZ_CP018229	Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence	588785-588818	6	0.824
NZ_LT576042_4	4.96\|2193163\|40\|NZ_LT576042\|CRT	2193163-2193202	40	KX620754	Propionibacterium phage G4, complete genome	21494-21533	6	0.85
NZ_LT576042_4	4.106\|2193885\|39\|NZ_LT576042\|CRT	2193885-2193923	39	NC_041891	Propionibacterium phage B22, complete genome	28878-28916	6	0.846
NZ_LT576042_4	4.115\|2194531\|37\|NZ_LT576042\|CRT	2194531-2194567	37	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	218693-218729	7	0.811
NZ_LT576042_4	4.12\|2193090\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193090-2193127	38	NZ_CP015091	Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence	238751-238788	8	0.789
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	KJ433975	Mycobacterium phage 40BC, complete genome	61818-61851	8	0.765
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	KJ433973	Mycobacterium phage 39HC, complete genome	61818-61851	8	0.765
NZ_LT576042_5	5.1\|2432460\|32\|NZ_LT576042\|CRISPRCasFinder	2432460-2432491	32	NZ_KU254577	Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence	93743-93774	8	0.75
NZ_LT576042_5	5.1\|2432460\|32\|NZ_LT576042\|CRISPRCasFinder	2432460-2432491	32	CP031732	Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence	144379-144410	8	0.75
NZ_LT576042_5	5.1\|2432460\|32\|NZ_LT576042\|CRISPRCasFinder	2432460-2432491	32	NZ_AP015031	Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence	216038-216069	8	0.75
NZ_LT576042_4	4.20\|2193673\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193673-2193706	34	NC_017966	Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence	363847-363880	9	0.735
NZ_LT576042_4	4.32\|2194532\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194532-2194565	34	NZ_CP039644	Azospirillum sp. TSA2s plasmid p2, complete sequence	218694-218727	9	0.735
NZ_LT576042_4	4.91\|2192796\|41\|NZ_LT576042\|CRT	2192796-2192836	41	AF428260	Propionibacterium phage phiB5, complete genome	5483-5523	9	0.78
NZ_LT576042_4	4.91\|2192796\|41\|NZ_LT576042\|CRT	2192796-2192836	41	NC_003460	Propionibacterium phage B5, complete genome	5483-5523	9	0.78
NZ_LT576042_4	4.23\|2193886\|36\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193886-2193921	36	HQ634153	Salicola phage CGphi29 genomic sequence	17080-17115	10	0.722
NZ_LT576042_4	4.12\|2193090\|38\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193090-2193127	38	MT310859	Mycobacterium phage MarkPhew, complete genome	57077-57114	11	0.711
NZ_LT576042_4	4.20\|2193673\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193673-2193706	34	NZ_CP030772	Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence	732812-732845	11	0.676
NZ_LT576042_4	4.20\|2193673\|34\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2193673-2193706	34	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	2081894-2081927	11	0.676
NZ_LT576042_4	4.33\|2194602\|35\|NZ_LT576042\|PILER-CR,CRISPRCasFinder	2194602-2194636	35	NZ_CP017943	Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence	67609-67643	11	0.686

1. spacer 4.3|2192436|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 0, identity: 1.0

ctaaaacgggactgcttggctggtgatgatgaat	CRISPR spacer
ctaaaacgggactgcttggctggtgatgatgaat	Protospacer
**********************************

2. spacer 4.10|2192944|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 0, identity: 1.0

tcaccgcgctctgacaaggcccgatactttcgcccg	CRISPR spacer
tcaccgcgctctgacaaggcccgatactttcgcccg	Protospacer
************************************

3. spacer 4.10|2192944|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 0, identity: 1.0

tcaccgcgctctgacaaggcccgatactttcgcccg	CRISPR spacer
tcaccgcgctctgacaaggcccgatactttcgcccg	Protospacer
************************************

4. spacer 4.10|2192944|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 0, identity: 1.0

tcaccgcgctctgacaaggcccgatactttcgcccg	CRISPR spacer
tcaccgcgctctgacaaggcccgatactttcgcccg	Protospacer
************************************

5. spacer 4.11|2193016|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 0, identity: 1.0

ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	CRISPR spacer
ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	Protospacer
**************************************

6. spacer 4.20|2193673|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 0, identity: 1.0

ttgccgaccagcccggcgaccacggtattcacga	CRISPR spacer
ttgccgaccagcccggcgaccacggtattcacga	Protospacer
**********************************

7. spacer 4.20|2193673|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 0, identity: 1.0

ttgccgaccagcccggcgaccacggtattcacga	CRISPR spacer
ttgccgaccagcccggcgaccacggtattcacga	Protospacer
**********************************

8. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

9. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

10. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

11. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

12. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

13. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 0, identity: 1.0

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcaccccgacaaatttcctc	Protospacer
************************************

14. spacer 4.4|2192506|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 1, identity: 0.971

atgtcatctgccaccgcacctgctgggcaatcga	CRISPR spacer
atgtcatctgccaccgcacctgttgggcaatcga	Protospacer
**********************.***********

15. spacer 4.4|2192506|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 1, identity: 0.971

atgtcatctgccaccgcacctgctgggcaatcga	CRISPR spacer
atgtcatctgccaccgcacctgttgggcaatcga	Protospacer
**********************.***********

16. spacer 4.21|2193743|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.972

ttcacctgaagcccgaggcgctcccggatccggatc	CRISPR spacer
ttcacctgaagcccgaggcgctcacggatccggatc	Protospacer
*********************** ************

17. spacer 4.21|2193743|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.972

ttcacctgaagcccgaggcgctcccggatccggatc	CRISPR spacer
ttcacctgaagcccgaggcgctcacggatccggatc	Protospacer
*********************** ************

18. spacer 4.21|2193743|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 1, identity: 0.972

ttcacctgaagcccgaggcgctcccggatccggatc	CRISPR spacer
ttcacctgaagcccgaggcgctcacggatccggatc	Protospacer
*********************** ************

19. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 1, identity: 0.972

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccacttgcg	Protospacer
** *********************************

20. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.972

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccacttgcg	Protospacer
** *********************************

21. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.972

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccacttgcg	Protospacer
** *********************************

22. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.972

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccacttgcg	Protospacer
** *********************************

23. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 1, identity: 0.972

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccacttgcg	Protospacer
** *********************************

24. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.971

gctgatcatccagctggtcggcgggattgtcggg	CRISPR spacer
gctgatcatccagctggtcggcgggattatcggg	Protospacer
****************************.*****

25. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.971

gctgatcatccagctggtcggcgggattgtcggg	CRISPR spacer
gctgatcatccagctggtcggcgggattatcggg	Protospacer
****************************.*****

26. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcgccccgacaaatttcctc	Protospacer
******************.*****************

27. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggaccccccaccccgacaaatttcctc	Protospacer
****************.*******************

28. spacer 4.43|2195324|36|NZ_LT576042|PILER-CR matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggaccccccaccccgacaaatttcctc	Protospacer
****************.*******************

29. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggacccctcgccccgacaaatttcctc	Protospacer
******************.*****************

30. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggaccccccaccccgacaaatttcctc	Protospacer
****************.*******************

31. spacer 4.68|2195323|36|NZ_LT576042|CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 1, identity: 0.972

gtgccatgtggacccctcaccccgacaaatttcctc	CRISPR spacer
gtgccatgtggaccccccaccccgacaaatttcctc	Protospacer
****************.*******************

32. spacer 4.115|2194531|37|NZ_LT576042|CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 1, identity: 0.973

cgctgatcatccagctggtcggcgggattgtcgggat	CRISPR spacer
cgctgatcatccagctggtcggcgggattatcgggat	Protospacer
*****************************.*******

33. spacer 4.115|2194531|37|NZ_LT576042|CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 1, identity: 0.973

cgctgatcatccagctggtcggcgggattgtcgggat	CRISPR spacer
cgctgatcatccagctggtcggcgggattatcgggat	Protospacer
*****************************.*******

34. spacer 4.3|2192436|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 2, identity: 0.941

ctaaaacgggactgcttggctggtgatgatgaat	CRISPR spacer
tcaaaacgggactgcttggctggtgatgatgaat	Protospacer
..********************************

35. spacer 4.3|2192436|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 2, identity: 0.941

ctaaaacgggactgcttggctggtgatgatgaat	CRISPR spacer
tcaaaacgggactgcttggctggtgatgatgaat	Protospacer
..********************************

36. spacer 4.11|2193016|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 2, identity: 0.947

ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	CRISPR spacer
cgcatgcagcagtcactgcgcaagtgggggcgtcggga	Protospacer
 **.**********************************

37. spacer 4.11|2193016|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 2, identity: 0.947

ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	CRISPR spacer
cgcatgcagcagtcactgcgcaagtgggggcgtcggga	Protospacer
 **.**********************************

38. spacer 4.11|2193016|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 2, identity: 0.947

ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	CRISPR spacer
cgcatgcagcagtcactgcgcaagtgggggcgtcggga	Protospacer
 **.**********************************

39. spacer 4.11|2193016|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 2, identity: 0.947

ggcgtgcagcagtcactgcgcaagtgggggcgtcggga	CRISPR spacer
cgcatgcagcagtcactgcgcaagtgggggcgtcggga	Protospacer
 **.**********************************

40. spacer 4.44|2195396|38|NZ_LT576042|PILER-CR matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 2, identity: 0.947

cgggcctgctgggtgtcggggtcggggtcgtccgacgg	CRISPR spacer
cgggcctgctgagtgtcgggatcggggtcgtccgacgg	Protospacer
***********.********.*****************

41. spacer 4.69|2195395|38|NZ_LT576042|CRISPRCasFinder matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 2, identity: 0.947

cgggcctgctgggtgtcggggtcggggtcgtccgacgg	CRISPR spacer
cgggcctgctgagtgtcgggatcggggtcgtccgacgg	Protospacer
***********.********.*****************

42. spacer 4.87|2192505|37|NZ_LT576042|CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 2, identity: 0.946

catgtcatctgccaccgcacctgctgggcaatcgaat	CRISPR spacer
catgtcatctgccaccgcacctgttgggcaatcgact	Protospacer
***********************.*********** *

43. spacer 4.87|2192505|37|NZ_LT576042|CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 2, identity: 0.946

catgtcatctgccaccgcacctgctgggcaatcgaat	CRISPR spacer
catgtcatctgccaccgcacctgttgggcaatcgact	Protospacer
***********************.*********** *

44. spacer 4.93|2192943|39|NZ_LT576042|CRT matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 2, identity: 0.949

ctcaccgcgctctgacaaggcccgatactttcgcccgat	CRISPR spacer
ttcaccgcgctctgacaaggcccgatactttcgcccggt	Protospacer
.************************************.*

45. spacer 4.93|2192943|39|NZ_LT576042|CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 2, identity: 0.949

ctcaccgcgctctgacaaggcccgatactttcgcccgat	CRISPR spacer
ttcaccgcgctctgacaaggcccgatactttcgcccggt	Protospacer
.************************************.*

46. spacer 4.93|2192943|39|NZ_LT576042|CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 2, identity: 0.949

ctcaccgcgctctgacaaggcccgatactttcgcccgat	CRISPR spacer
ttcaccgcgctctgacaaggcccgatactttcgcccggt	Protospacer
.************************************.*

47. spacer 4.94|2193015|41|NZ_LT576042|CRT matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 2, identity: 0.951

cggcgtgcagcagtcactgcgcaagtgggggcgtcgggaat	CRISPR spacer
cggcgtgcagcagtcactgcgcaagtgggggcgtcgggacc	Protospacer
*************************************** .

48. spacer 4.103|2193672|37|NZ_LT576042|CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 2, identity: 0.946

cttgccgaccagcccggcgaccacggtattcacgaat	CRISPR spacer
cttgccgaccagcccggcgaccacggtattcacgacg	Protospacer
***********************************

49. spacer 4.103|2193672|37|NZ_LT576042|CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 2, identity: 0.946

cttgccgaccagcccggcgaccacggtattcacgaat	CRISPR spacer
cttgccgaccagcccggcgaccacggtattcacgacg	Protospacer
***********************************

50. spacer 4.104|2193742|39|NZ_LT576042|CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 2, identity: 0.949

cttcacctgaagcccgaggcgctcccggatccggatcat	CRISPR spacer
cttcacctgaagcccgaggcgctcacggatccggatcgt	Protospacer
************************ ************.*

51. spacer 4.104|2193742|39|NZ_LT576042|CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 2, identity: 0.949

cttcacctgaagcccgaggcgctcccggatccggatcat	CRISPR spacer
cttcacctgaagcccgaggcgctcacggatccggatcgt	Protospacer
************************ ************.*

52. spacer 4.104|2193742|39|NZ_LT576042|CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 2, identity: 0.949

cttcacctgaagcccgaggcgctcccggatccggatcat	CRISPR spacer
cttcacctgaagcccgaggcgctcacggatccggatcgt	Protospacer
************************ ************.*

53. spacer 4.13|2193164|37|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 3, identity: 0.919

tgtcggtcatgatcctggtcctttcagggtctgggct	CRISPR spacer
aatcggtcatgatcctggtcccttcagggtctgggct	Protospacer
 .*******************.***************

54. spacer 4.14|2193237|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 3, identity: 0.917

cttctccacccgcggccaggccatcgcctccatcac	CRISPR spacer
cttctccacccgcgacgaggccatcgcctccatcat	Protospacer
**************.* ******************.

55. spacer 4.14|2193237|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 3, identity: 0.917

cttctccacccgcggccaggccatcgcctccatcac	CRISPR spacer
cttctccacccgcgacgaggccatcgcctccatcat	Protospacer
**************.* ******************.

56. spacer 4.86|2192435|37|NZ_LT576042|CRT matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 3, identity: 0.919

cctaaaacgggactgcttggctggtgatgatgaatat	CRISPR spacer
tctaaaacgggactgcttggctggtgatgatgaattc	Protospacer
.********************************** .

57. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to KX620751 (Propionibacterium phage Doucette, complete genome) position: , mismatch: 3, identity: 0.923

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccacttgcgca	Protospacer
*** *********************************

58. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 3, identity: 0.923

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccacttgcgca	Protospacer
*** *********************************

59. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 3, identity: 0.923

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccacttgcgca	Protospacer
*** *********************************

60. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 3, identity: 0.923

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccacttgcgca	Protospacer
*** *********************************

61. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 3, identity: 0.923

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccacttgcgca	Protospacer
*** *********************************

62. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 3, identity: 0.923

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
cggtgccatgtggacccctcaccccgacaaatttcctcg	Protospacer
  ************************************.

63. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 3, identity: 0.923

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
cggtgccatgtggacccctcaccccgacaaatttcctcg	Protospacer
  ************************************.

64. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 3, identity: 0.923

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
cggtgccatgtggacccctcaccccgacaaatttcctcg	Protospacer
  ************************************.

65. spacer 4.22|2193815|35|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 4, identity: 0.886

tctgaaccgccgataagcacggccagccacccgga	CRISPR spacer
tctgaaccgccgataagcacggcgagccatccgat	Protospacer
*********************** *****.***.

66. spacer 4.22|2193815|35|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 4, identity: 0.886

tctgaaccgccgataagcacggccagccacccgga	CRISPR spacer
tctgaaccgccgataagcacggcgagccatccgat	Protospacer
*********************** *****.***.

67. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 4, identity: 0.889

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gatctgatcggcaaggtcccgacgcccccagccgcg	Protospacer
** *************************** ..***

68. spacer 4.94|2193015|41|NZ_LT576042|CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 4, identity: 0.902

cggcgtgcagcagtcactgcgcaagtgggggcgtcgggaat	CRISPR spacer
ccgcatgcagcagtcactgcgcaagtgggggcgtcgggacc	Protospacer
* **.********************************** .

69. spacer 4.94|2193015|41|NZ_LT576042|CRT matches to NC_041890 (Propionibacterium phage Anatole, complete genome) position: , mismatch: 4, identity: 0.902

cggcgtgcagcagtcactgcgcaagtgggggcgtcgggaat	CRISPR spacer
ccgcatgcagcagtcactgcgcaagtgggggcgtcgggacc	Protospacer
* **.********************************** .

70. spacer 4.94|2193015|41|NZ_LT576042|CRT matches to KX620752 (Propionibacterium phage E1, complete genome) position: , mismatch: 4, identity: 0.902

cggcgtgcagcagtcactgcgcaagtgggggcgtcgggaat	CRISPR spacer
ccgcatgcagcagtcactgcgcaagtgggggcgtcgggacc	Protospacer
* **.********************************** .

71. spacer 4.94|2193015|41|NZ_LT576042|CRT matches to NC_041892 (Propionibacterium phage B3, complete genome) position: , mismatch: 4, identity: 0.902

cggcgtgcagcagtcactgcgcaagtgggggcgtcgggaat	CRISPR spacer
ccgcatgcagcagtcactgcgcaagtgggggcgtcgggacc	Protospacer
* **.********************************** .

72. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 4, identity: 0.897

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
aggtgccatgtggacccctcgccccgacaaatttcctcg	Protospacer
. ******************.*****************.

73. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 4, identity: 0.897

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
cggtgccatgtggaccccccaccccgacaaatttcctcg	Protospacer
  ****************.*******************.

74. spacer 4.126|2195321|39|NZ_LT576042|CRT matches to NC_041894 (Propionibacterium phage E6, complete genome) position: , mismatch: 4, identity: 0.897

gcgtgccatgtggacccctcaccccgacaaatttcctca	CRISPR spacer
cggtgccatgtggaccccccaccccgacaaatttcctcg	Protospacer
  ****************.*******************.

75. spacer 4.127|2195393|41|NZ_LT576042|CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 4, identity: 0.902

gccgggcctgctgggtgtcggggtcggggtcgtccgacgga	CRISPR spacer
ggcgggcctgctgagtgtcgggatcggggtcgtccgacggg	Protospacer
* ***********.********.*****************.

76. spacer 4.86|2192435|37|NZ_LT576042|CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 5, identity: 0.865

cctaaaacgggactgcttggctggtgatgatgaatat	CRISPR spacer
atcaaaacgggactgcttggctggtgatgatgaattc	Protospacer
 ..******************************** .

77. spacer 4.86|2192435|37|NZ_LT576042|CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 5, identity: 0.865

cctaaaacgggactgcttggctggtgatgatgaatat	CRISPR spacer
atcaaaacgggactgcttggctggtgatgatgaattc	Protospacer
 ..******************************** .

78. spacer 4.97|2193236|39|NZ_LT576042|CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 5, identity: 0.872

ccttctccacccgcggccaggccatcgcctccatcacat	CRISPR spacer
ccttctccacccgcgacgaggccatcgcctccatcatcg	Protospacer
***************.* ******************.

79. spacer 4.97|2193236|39|NZ_LT576042|CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 5, identity: 0.872

ccttctccacccgcggccaggccatcgcctccatcacat	CRISPR spacer
ccttctccacccgcgacgaggccatcgcctccatcatcg	Protospacer
***************.* ******************.

80. spacer 4.105|2193814|38|NZ_LT576042|CRT matches to KU984979 (Propionibacterium phage PFR1, complete genome) position: , mismatch: 5, identity: 0.868

ctctgaaccgccgataagcacggccagccacccggaat	CRISPR spacer
atctgaaccgccgataagcacggcgagccatccgatat	Protospacer
 *********************** *****.***. **

81. spacer 4.105|2193814|38|NZ_LT576042|CRT matches to NC_031108 (Propionibacterium phage PFR2, complete genome) position: , mismatch: 5, identity: 0.868

ctctgaaccgccgataagcacggccagccacccggaat	CRISPR spacer
atctgaaccgccgataagcacggcgagccatccgatat	Protospacer
 *********************** *****.***. **

82. spacer 4.8|2192797|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to AF428260 (Propionibacterium phage phiB5, complete genome) position: , mismatch: 6, identity: 0.842

ttccacgtccaggctctgtgccgcgagcatttccagct	CRISPR spacer
ggctctgtgcaggctctgtgccgcgagcatttccagct	Protospacer
  *. .** *****************************

83. spacer 4.8|2192797|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_003460 (Propionibacterium phage B5, complete genome) position: , mismatch: 6, identity: 0.842

ttccacgtccaggctctgtgccgcgagcatttccagct	CRISPR spacer
ggctctgtgcaggctctgtgccgcgagcatttccagct	Protospacer
  *. .** *****************************

84. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_CP018229 (Rhizobium leguminosarum strain Vaf-108 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.824

gctgatcatccagctggtcggcgg-gattgtcggg	CRISPR spacer
gctgctcagccagctggtcggcggcctttgtcgc-	Protospacer
**** *** ***************   ******

85. spacer 4.96|2193163|40|NZ_LT576042|CRT matches to KX620754 (Propionibacterium phage G4, complete genome) position: , mismatch: 6, identity: 0.85

ctgtcggtcatgatcctggtcctttcagggtctgggctat	CRISPR spacer
gaatcggtcatgatcctggtcccttcagggtctgggctcc	Protospacer
  .*******************.*************** .

86. spacer 4.106|2193885|39|NZ_LT576042|CRT matches to NC_041891 (Propionibacterium phage B22, complete genome) position: , mismatch: 6, identity: 0.846

cgagctgatcggcaaggtcccgacgcccccacttgcgat	CRISPR spacer
cgatctgatcggcaaggtcccgacgcccccagccgcgca	Protospacer
*** *************************** ..***

87. spacer 4.115|2194531|37|NZ_LT576042|CRT matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.811

cgctgatcatccagctggtcggcgggattg---tcgggat	CRISPR spacer
cgctgatcatcccgatggtcggcgggctggcgctcgg---	Protospacer
************ * *********** * *   ****

88. spacer 4.12|2193090|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_CP015091 (Pelagibaca abyssi strain JLT2014 plasmid pPABY1, complete sequence) position: , mismatch: 8, identity: 0.789

cgcgagcgagccaaggccgaggccgaccgctt---cacaaa	CRISPR spacer
cacgagcgagcaaaggccgaggccgagcgcctgtgcgc---	Protospacer
*.********* ************** ***.*   *.*

89. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KJ433975 (Mycobacterium phage 40BC, complete genome) position: , mismatch: 8, identity: 0.765

gctgatcatccagctggtcggcgggattgtcggg	CRISPR spacer
gctgatcatccagctgatgggcggggccggggtg	Protospacer
****************.* ******...*  * *

90. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to KJ433973 (Mycobacterium phage 39HC, complete genome) position: , mismatch: 8, identity: 0.765

gctgatcatccagctggtcggcgggattgtcggg	CRISPR spacer
gctgatcatccagctgatgggcggggccggggtg	Protospacer
****************.* ******...*  * *

91. spacer 5.1|2432460|32|NZ_LT576042|CRISPRCasFinder matches to NZ_KU254577 (Pseudomonas aeruginosa strain HN39 plasmid pHN39-SIM, complete sequence) position: , mismatch: 8, identity: 0.75

ctggccagaaacctctaccccgagccccttga	CRISPR spacer
atccccagaaaccgctaccccgtgcccgcgga	Protospacer
 *  ********* ******** **** . **

92. spacer 5.1|2432460|32|NZ_LT576042|CRISPRCasFinder matches to CP031732 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

ctggccagaaacctctaccccgagccccttga	CRISPR spacer
atccccagaaaccgctaccccgtgcccgcgga	Protospacer
 *  ********* ******** **** . **

93. spacer 5.1|2432460|32|NZ_LT576042|CRISPRCasFinder matches to NZ_AP015031 (Pseudomonas putida strain KF715 plasmid pKF715B, complete sequence) position: , mismatch: 8, identity: 0.75

ctggccagaaacctctaccccgagccccttga	CRISPR spacer
atccccagaaaccgctaccccgtgcccgcgga	Protospacer
 *  ********* ******** **** . **

94. spacer 4.20|2193673|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 9, identity: 0.735

ttgccgaccagcccggcgaccacggtattcacga	CRISPR spacer
atgccgaccagcccggccaccagggccggcccgc	Protospacer
 **************** **** **.   * **

95. spacer 4.32|2194532|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 9, identity: 0.735

gctgatcatccagctggtcggcgggattgtcggg	CRISPR spacer
gctgatcatcccgatggtcggcgggctggcgctc	Protospacer
*********** * *********** * *.

96. spacer 4.91|2192796|41|NZ_LT576042|CRT matches to AF428260 (Propionibacterium phage phiB5, complete genome) position: , mismatch: 9, identity: 0.78

cttccacgtccaggctctgtgccgcgagcatttccagctat	CRISPR spacer
aggctctgtgcaggctctgtgccgcgagcatttccagctgc	Protospacer
   *. .** *****************************..

97. spacer 4.91|2192796|41|NZ_LT576042|CRT matches to NC_003460 (Propionibacterium phage B5, complete genome) position: , mismatch: 9, identity: 0.78

cttccacgtccaggctctgtgccgcgagcatttccagctat	CRISPR spacer
aggctctgtgcaggctctgtgccgcgagcatttccagctgc	Protospacer
   *. .** *****************************..

98. spacer 4.23|2193886|36|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to HQ634153 (Salicola phage CGphi29 genomic sequence) position: , mismatch: 10, identity: 0.722

gagctgatcggcaaggtcccgacgcccccacttgcg	CRISPR spacer
gagcagatcggcaagatcccgacgccagagggggag	Protospacer
**** **********.**********   .   * *

99. spacer 4.12|2193090|38|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to MT310859 (Mycobacterium phage MarkPhew, complete genome) position: , mismatch: 11, identity: 0.711

cgcgagcgagccaaggccgaggccgaccgcttcacaaa-----	CRISPR spacer
cttgagcacgccaaggccgaggccgaccg-----cgagcggct	Protospacer
* .****. ********************     *.*.

100. spacer 4.20|2193673|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_CP030772 (Streptomyces sp. YIM 121038 plasmid pSSP121038, complete sequence) position: , mismatch: 11, identity: 0.676

ttgccgaccagcccggcgaccacggtattcacga	CRISPR spacer
gtgccgaccagcccggcgaacgcgggcccgagcg	Protospacer
 ****************** *.***  .. *  .

101. spacer 4.20|2193673|34|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 11, identity: 0.676

ttgccgaccagcccggcgaccacggtattcacga	CRISPR spacer
ttgccggtcagcccggcgaccacgcctgcggtgc	Protospacer
******..**************** .  . ..*

102. spacer 4.33|2194602|35|NZ_LT576042|PILER-CR,CRISPRCasFinder matches to NZ_CP017943 (Phyllobacterium zundukense strain Tri-48 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.686

caggcgatccgtctgtcgaaggactcgaacggcca	CRISPR spacer
gaggcgatccgtctatcgaacgactcccgtttcgg	Protospacer
 *************.***** *****  ..  * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1644375 : 1718446

Tupanvirus(15.38%)

tRNA,transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157761573.1\|1644375_1645605_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_013160745.1\|1645712_1646189_-	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	8.5e-32	52.3
WP_013160744.1\|1646299_1647805_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_112317735.1\|1647940_1648531_+	DoxX family protein	NA	NA	NA	NA
WP_097775877.1\|1648566_1649361_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_060760787.1\|1649624_1650419_+	thioredoxin domain-containing protein	NA	NA	NA	NA
WP_055344004.1\|1650508_1653136_+\|tRNA	valine--tRNA ligase	A0A2K9KZB8	Tupanvirus	5.3e-160	36.3
WP_157761574.1\|1653242_1653992_-	HAD-IA family hydrolase	NA	NA	NA	NA
WP_013160738.1\|1654076_1655198_-	6-phosphofructokinase	NA	NA	NA	NA
WP_097775878.1\|1655276_1656719_-	threonine synthase	NA	NA	NA	NA
WP_036939438.1\|1656837_1657152_+	hypothetical protein	NA	NA	NA	NA
WP_013160735.1\|1657263_1658541_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	4.4e-136	59.2
WP_013160734.1\|1658662_1659352_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	7.4e-29	38.7
WP_162467436.1\|1659375_1659987_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	9.8e-41	45.6
WP_060762516.1\|1660097_1661330_-	AI-2E family transporter	NA	NA	NA	NA
WP_013160731.1\|1661562_1662756_-	AI-2E family transporter	NA	NA	NA	NA
WP_013160730.1\|1662980_1664564_-	trigger factor	NA	NA	NA	NA
WP_036939798.1\|1665299_1665614_-	multidrug efflux SMR transporter	NA	NA	NA	NA
WP_013160728.1\|1665725_1665974_-	hypothetical protein	NA	NA	NA	NA
WP_155489307.1\|1666167_1667721_+	hypothetical protein	NA	NA	NA	NA
WP_048735058.1\|1668770_1669643_-	DMT family transporter	NA	NA	NA	NA
WP_013160725.1\|1669721_1670288_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_097775879.1\|1670355_1672635_-	NAD-dependent DNA ligase LigA	A0A0K2QQN8	Ralstonia_phage	4.0e-103	36.8
WP_013160723.1\|1672711_1673506_-	hypothetical protein	NA	NA	NA	NA
WP_013160722.1\|1673730_1674345_-	DSBA oxidoreductase	NA	NA	NA	NA
WP_097775880.1\|1674687_1677291_+	aminopeptidase N	A0A0P0IY26	Acinetobacter_phage	1.0e-46	30.8
WP_055344009.1\|1677503_1678961_+	NADP-dependent phosphogluconate dehydrogenase	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	3.2e-37	28.4
WP_013160719.1\|1679090_1679912_+	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_013160718.1\|1680058_1680940_-	thioesterase family protein	NA	NA	NA	NA
WP_013160717.1\|1680945_1682835_-	long-chain fatty acid--CoA ligase	A0A1V0SBX8	Catovirus	1.1e-42	24.4
WP_013160716.1\|1683011_1683470_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_097775881.1\|1683475_1686307_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_044658228.1\|1686427_1688464_-	M3 family metallopeptidase	NA	NA	NA	NA
WP_013160713.1\|1688520_1689891_+	DUF4921 family protein	NA	NA	NA	NA
WP_055344010.1\|1689877_1691398_-	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_013160711.1\|1691410_1692040_-	dihydroxyacetone kinase subunit L	NA	NA	NA	NA
WP_013160710.1\|1692039_1693035_-	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA
WP_013160709.1\|1693206_1694895_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	7.9e-48	28.8
WP_013160708.1\|1695090_1695591_-	single-stranded DNA-binding protein	A0A1J0MC80	Streptomyces_phage	6.6e-11	34.8
WP_055345487.1\|1695807_1696470_-	hypothetical protein	NA	NA	NA	NA
WP_013160706.1\|1696466_1698110_-	50S ribosome-binding GTPase	NA	NA	NA	NA
WP_044636071.1\|1698106_1699954_-	ABC transporter	NA	NA	NA	NA
WP_138427718.1\|1700023_1701526_-\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_036939465.1\|1701765_1703031_+	MFS transporter	NA	NA	NA	NA
WP_055344612.1\|1703051_1703723_+	oligoribonuclease	M4M9I5	Vibrio_phage	4.0e-19	34.0
WP_097775882.1\|1705973_1706537_-	hypothetical protein	NA	NA	NA	NA
WP_097776053.1\|1706548_1706989_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_097775883.1\|1707070_1708852_-	type IV secretory system conjugative DNA transfer family protein	NA	NA	NA	NA
WP_055345626.1\|1708848_1709382_-	hypothetical protein	NA	NA	NA	NA
WP_155642736.1\|1709400_1709562_+	hypothetical protein	NA	NA	NA	NA
WP_097775884.1\|1709620_1710106_+	VanZ family protein	NA	NA	NA	NA
WP_097775885.1\|1710191_1710836_+	VanZ family protein	NA	NA	NA	NA
WP_165363453.1\|1711238_1711793_-	hypothetical protein	NA	NA	NA	NA
WP_172952781.1\|1712049_1713717_+	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA
WP_157761577.1\|1713874_1715371_+	sugar transferase	NA	NA	NA	NA
WP_097775733.1\|1717202_1718446_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.9e-21	33.1

DBSCAN-SWA_2

1726058 : 1773661

Mycobacterium_phage(12.5%)

protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157761581.1\|1726058_1726304_-\|transposase	transposase	NA	NA	NA	NA
WP_097775895.1\|1726509_1726932_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_129931526.1\|1726928_1727246_-	hypothetical protein	NA	NA	NA	NA
WP_097775897.1\|1727355_1728663_-\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	5.0e-167	66.9
WP_165363495.1\|1729152_1729428_+	hypothetical protein	NA	NA	NA	NA
WP_157761582.1\|1731325_1732327_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_097775899.1\|1732515_1733640_+	LCP family protein	NA	NA	NA	NA
WP_081083616.1\|1734358_1735000_-	hypothetical protein	NA	NA	NA	NA
WP_097776055.1\|1735075_1736285_+\|transposase	IS3-like element ISPfr11 family transposase	U5P429	Shigella_phage	7.2e-35	34.1
WP_013160701.1\|1736826_1737333_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	A0A060QNR4	Streptococcus_phage	1.4e-16	42.6
WP_097775900.1\|1737407_1739741_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	8.5e-117	31.9
WP_055346574.1\|1739811_1740627_+	tyrosine-protein phosphatase	NA	NA	NA	NA
WP_055345425.1\|1740739_1742053_+	Mur ligase family protein	NA	NA	NA	NA
WP_013160697.1\|1742046_1742820_+	hypothetical protein	NA	NA	NA	NA
WP_013160696.1\|1743081_1743531_-	co-chaperone GroES	NA	NA	NA	NA
WP_013160695.1\|1743557_1743857_-	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_044636068.1\|1744030_1744519_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_013160693.1\|1744811_1745504_+	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_013160692.1\|1745484_1746252_+	cobalt-precorrin-6A reductase	NA	NA	NA	NA
WP_013160691.1\|1746324_1746915_+	precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT	NA	NA	NA	NA
WP_013160689.1\|1747011_1747665_+	precorrin-8X methylmutase	NA	NA	NA	NA
WP_013160688.1\|1747661_1748954_+	cobalt-precorrin-5B (C(1))-methyltransferase	NA	NA	NA	NA
WP_172952782.1\|1748985_1750251_-	cobalamin biosynthesis protein	NA	NA	NA	NA
WP_060762955.1\|1750219_1752880_-	precorrin-3B C(17)-methyltransferase	NA	NA	NA	NA
WP_013160685.1\|1752876_1753836_-	precorrin-4 C(11)-methyltransferase	NA	NA	NA	NA
WP_013160684.1\|1753865_1754639_-	precorrin-2 C(20)-methyltransferase	NA	NA	NA	NA
WP_048768869.1\|1755473_1757390_+	methylmalonyl-CoA mutase small subunit	NA	NA	NA	NA
WP_097775902.1\|1757386_1759573_+	methylmalonyl-CoA mutase	NA	NA	NA	NA
WP_097775903.1\|1759565_1760579_+	methylmalonyl Co-A mutase-associated GTPase MeaB	NA	NA	NA	NA
WP_013160679.1\|1760780_1762232_-	DNA polymerase IV	NA	NA	NA	NA
WP_112317801.1\|1762235_1762838_-	dihydrofolate reductase	A0A1Y0SUI9	Pseudomonas_phage	4.1e-15	32.9
WP_013160677.1\|1762952_1763765_-	thymidylate synthase	A6M9A2	Geobacillus_virus	8.3e-96	60.0
WP_013160676.1\|1763766_1764573_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	X5LRP0	Ugandan_cassava_brown_streak_virus	3.6e-06	26.3
WP_013160675.1\|1764569_1765331_-	ribonuclease PH	NA	NA	NA	NA
WP_055344137.1\|1765484_1766303_-	glutamate racemase	NA	NA	NA	NA
WP_048735089.1\|1766390_1766999_-	DUF2017 domain-containing protein	NA	NA	NA	NA
WP_112317802.1\|1766995_1767289_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA
WP_055344136.1\|1767415_1768771_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	8.2e-56	36.1
WP_013160670.1\|1768933_1769938_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA
WP_172622131.1\|1770040_1771243_+	AMP-binding protein	NA	NA	NA	NA
WP_157761583.1\|1771309_1772578_+	chorismate-binding protein	NA	NA	NA	NA
WP_044635816.1\|1772626_1773661_-\|transposase	IS30 family transposase	NA	NA	NA	NA

DBSCAN-SWA_3

2272617 : 2353947

Tupanvirus(25.0%)

tRNA,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_097775968.1\|2272617_2273649_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_013160211.1\|2273836_2274055_-	CsbD family protein	NA	NA	NA	NA
WP_060763014.1\|2274224_2275307_+	AMP-binding protein	NA	NA	NA	NA
WP_097775969.1\|2275303_2276458_+	thiolase family protein	NA	NA	NA	NA
WP_080713602.1\|2276814_2278299_+	hexose-6-phosphate:phosphate antiporter	NA	NA	NA	NA
WP_048735551.1\|2278291_2279143_+	inositol monophosphatase family protein	NA	NA	NA	NA
WP_063493893.1\|2279368_2280841_+	cytosine permease	NA	NA	NA	NA
WP_063493892.1\|2280888_2281842_+	hypothetical protein	NA	NA	NA	NA
WP_060761261.1\|2281990_2283649_+	DNA cytosine methyltransferase	K4HZD0	Acidithiobacillus_phage	2.0e-40	29.0
WP_157761601.1\|2283990_2285757_+	hypothetical protein	NA	NA	NA	NA
WP_155489092.1\|2286142_2287198_+	hypothetical protein	NA	NA	NA	NA
WP_097775970.1\|2287271_2292908_+	hypothetical protein	NA	NA	NA	NA
WP_013160200.1\|2292891_2293326_+	very short patch repair endonuclease	V5UTF4	Oenococcus_phage	1.5e-11	38.2
WP_026138135.1\|2293595_2294921_+\|transposase	ISL3-like element ISPfr2 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.6e-197	77.0
WP_013160198.1\|2295392_2295596_+	hypothetical protein	NA	NA	NA	NA
WP_013160197.1\|2295885_2297304_-	MFS transporter	NA	NA	NA	NA
WP_044635917.1\|2297593_2298322_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	5.3e-17	45.2
WP_063493620.1\|2298328_2300017_-	metallophosphoesterase	NA	NA	NA	NA
WP_044635915.1\|2300009_2301398_-	MFS transporter	NA	NA	NA	NA
WP_097775971.1\|2301799_2304199_-	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA
WP_097775733.1\|2304451_2305695_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	7.9e-21	33.1
WP_097775972.1\|2305922_2306615_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_060759463.1\|2306689_2307664_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	4.0e-44	34.5
WP_044657904.1\|2308012_2309410_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA
WP_044657903.1\|2309521_2310307_+	ROK family protein	NA	NA	NA	NA
WP_097775973.1\|2310485_2311481_-	iron-siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_097775974.1\|2311727_2312786_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_013160184.1\|2312899_2313865_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA
WP_112317766.1\|2313867_2314752_+	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.8e-10	23.6
WP_044636579.1\|2314929_2316564_-\|tRNA	arginine--tRNA ligase	A0A2K9L2F0	Tupanvirus	1.1e-81	35.1
WP_097775975.1\|2316655_2318089_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	6.1e-49	32.6
WP_044657924.1\|2318176_2318803_-	YdcF family protein	NA	NA	NA	NA
WP_036942919.1\|2319109_2320882_-	DEAD/DEAH box helicase	I4AZM6	Saccharomonospora_phage	5.3e-79	35.1
WP_013160178.1\|2322985_2323279_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA
WP_013160177.1\|2323292_2324597_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_036942895.1\|2324599_2325472_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_044635907.1\|2325508_2326264_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA
WP_055346800.1\|2326447_2327092_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_097775976.1\|2327096_2328455_-	MFS transporter	NA	NA	NA	NA
WP_097775977.1\|2328665_2329544_-	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA
WP_052826848.1\|2329540_2331142_-	AMP-binding protein	A0A2K9KZV5	Tupanvirus	5.6e-11	21.2
WP_044657922.1\|2331166_2332393_-	L-carnitine CoA-transferase	NA	NA	NA	NA
WP_044657896.1\|2332464_2333601_-	crotonobetainyl-CoA dehydrogenase	NA	NA	NA	NA
WP_114179009.1\|2334016_2334214_+	hypothetical protein	NA	NA	NA	NA
WP_097775979.1\|2334210_2334744_+	hypothetical protein	NA	NA	NA	NA
WP_097775980.1\|2335053_2336361_+\|transposase	ISL3 family transposase	A0A2H4PDF8	Mycobacterium_phage	3.3e-187	72.4
WP_013162142.1\|2336556_2337297_+	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_097775981.1\|2337319_2338240_-	oxidoreductase	NA	NA	NA	NA
WP_044657716.1\|2338263_2339148_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_044657717.1\|2339147_2340008_+	EamA family transporter	NA	NA	NA	NA
WP_036940446.1\|2340635_2341319_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_036940449.1\|2341475_2341709_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_036940452.1\|2341795_2343763_+	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	3.3e-106	39.0
WP_172952768.1\|2344433_2344835_+	hypothetical protein	NA	NA	NA	NA
WP_041704400.1\|2344821_2345613_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_080516180.1\|2345574_2346528_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_036942789.1\|2346876_2349945_+	DUF4981 domain-containing protein	L0N6M2	Herpes_simplex_virus	2.1e-139	32.8
WP_097775984.1\|2349967_2351356_+	MFS transporter	NA	NA	NA	NA
WP_013160161.1\|2351401_2352397_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	1.6e-40	33.2
WP_044658393.1\|2352639_2353947_+\|transposase	ISL3-like element ISPfr4 family transposase	A0A2H4PDF8	Mycobacterium_phage	1.5e-195	77.5

DBSCAN-SWA_4

2432782 : 2497643

Staphylococcus_phage(15.38%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044636672.1\|2432782_2433784_+\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_036942942.1\|2433780_2434218_-	hypothetical protein	NA	NA	NA	NA
WP_013160075.1\|2434467_2435439_+	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA
WP_036943004.1\|2435612_2437037_+	argininosuccinate synthase	A0A140XAJ5	Dickeya_phage	1.7e-43	65.9
WP_036943006.1\|2437691_2439218_-	LCP family protein	NA	NA	NA	NA
WP_013160072.1\|2439601_2440348_+	NAD-dependent protein deacylase	A0A068EPD4	Bacillus_phage	1.3e-26	31.3
WP_013160071.1\|2440515_2441013_-	thiol peroxidase	NA	NA	NA	NA
WP_013160070.1\|2441345_2441993_+	CueP family metal-binding protein	NA	NA	NA	NA
WP_013160069.1\|2442054_2443176_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_041704379.1\|2443340_2444018_-	response regulator transcription factor	NA	NA	NA	NA
WP_013160067.1\|2444056_2445451_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_048734692.1\|2448827_2449508_-	GPP34 family phosphoprotein	NA	NA	NA	NA
WP_013160063.1\|2449628_2450903_-\|tRNA	serine--tRNA ligase	A0A2K9L088	Tupanvirus	2.8e-66	35.8
WP_013160062.1\|2451050_2452655_+	YegS/Rv2252/BmrU family lipid kinase	NA	NA	NA	NA
WP_013160060.1\|2454062_2454743_+	hypothetical protein	NA	NA	NA	NA
WP_157761606.1\|2455034_2455988_-	aminotransferase class IV	NA	NA	NA	NA
WP_138427884.1\|2455980_2457714_-	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	5.2e-63	36.2
WP_013160057.1\|2457951_2458941_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA
WP_097775992.1\|2459142_2460342_+	ABC transporter permease	NA	NA	NA	NA
WP_097775993.1\|2460338_2462159_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.1e-14	27.6
WP_097775994.1\|2462213_2463782_+	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.3e-105	43.2
WP_097775995.1\|2463778_2465032_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_097775996.1\|2465028_2468067_+	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_055344701.1\|2468131_2468629_-	DUF4411 family protein	NA	NA	NA	NA
WP_097776072.1\|2468628_2469783_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_044635816.1\|2469979_2471014_-\|transposase	IS30 family transposase	NA	NA	NA	NA
WP_097775997.1\|2471030_2471966_-	macro domain-containing protein	A0A0K1L687	Scale_drop_disease_virus	1.6e-21	44.6
WP_157761607.1\|2473975_2474539_-	hypothetical protein	NA	NA	NA	NA
WP_172952788.1\|2474958_2476494_-	gluconokinase	NA	NA	NA	NA
WP_013160037.1\|2476752_2477616_-	Fpg/Nei family DNA glycosylase	NA	NA	NA	NA
WP_044635870.1\|2477608_2478334_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_097776000.1\|2478740_2480909_-	serine/threonine protein kinase	A0A1D6Y713	Golden_Marseillevirus	1.1e-12	23.5
WP_013160040.1\|2481223_2481832_-	LysM peptidoglycan-binding domain-containing protein	A0A1J0GVU2	Streptomyces_phage	1.2e-27	44.1
WP_060762606.1\|2482045_2483350_-	citrate synthase	NA	NA	NA	NA
WP_013160042.1\|2483852_2484656_+	EcsC family protein	NA	NA	NA	NA
WP_013160043.1\|2484766_2485636_-	SdpI family protein	NA	NA	NA	NA
WP_172952789.1\|2485814_2487374_-	S8 family serine peptidase	NA	NA	NA	NA
WP_013160045.1\|2487395_2488544_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	1.6e-31	29.8
WP_080713591.1\|2488716_2489676_-	phosphopantothenoylcysteine decarboxylase	Q9HH70	Methanothermobacter_phage	1.1e-25	39.4
WP_013160047.1\|2490313_2490658_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_080516026.1\|2490660_2491413_-	hypothetical protein	NA	NA	NA	NA
WP_097775937.1\|2491431_2492739_+\|transposase	ISL3-like element ISPfr1 family transposase	A0A2H4PDF8	Mycobacterium_phage	2.6e-168	67.8
WP_063493589.1\|2492775_2493084_+\|transposase	transposase	NA	NA	NA	NA
WP_157761608.1\|2493106_2493334_+\|transposase	transposase	NA	NA	NA	NA
WP_080713571.1\|2493352_2494297_-	hypothetical protein	NA	NA	NA	NA
WP_097776055.1\|2496432_2497643_-\|transposase	IS3-like element ISPfr11 family transposase	U5P429	Shigella_phage	7.2e-35	34.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT576042

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection