CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT578453	Mycoplasma bovis isolate JF4278 chromosome I	3 crisprs	NA	1	0	8	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT578453_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT578453_1

227427-227509

Orphan

Consensus_repeat	Method
TCTGTACGAGATGTGCTTGAAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT578453_1

>merge|NZ_LT578453|1|227427-227509|CRISPRCasFinder
TCTGTACGAGATGTGCTTGAAGAGCTTGATGAATCAGGCGAATCGCTTTGAGTTCCAGATTCTGTACGAGATGTGTTTGAAGA

>NZ_LT578453|1|1|227427-227509|CRISPRCasFinder
TCTGTACGAGATGTGCTTGAAGA	GCTTGATGAATCAGGCGAATCGCTTTGAGTTCCAGAT
TCTGTACGAGATGTGTTTGAAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT578453.1\|WP_101456663.1\|225055_225751_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|223434
NZ_LT578453.1\|WP_013455927.1\|228509_229526_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT578453.1\|WP_080551570.1\|222915_223944_+\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT578453.1\|WP_075271093.1\|220436_221153_+\|ribonuclease-HIII	unknown	unknown	gnl\|CDD\|260000
NZ_LT578453.1\|WP_101456669.1\|238079_239465_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_101456745.1\|239464_239800_+\|HIT-family-protein	unknown	unknown	gnl\|CDD\|223611
NZ_LT578453.1\|WP_101456665.1\|232184_234131_+\|transketolase	unknown	unknown	gnl\|CDD\|223100
NZ_LT578453.1\|WP_101456744.1\|229689_230457_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380149
NZ_LT578453.1\|WP_101456666.1\|234193_234748_-\|inorganic-diphosphatase	unknown	unknown	gnl\|CDD\|179388
NZ_LT578453.1\|WP_101456668.1\|235890_238068_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_101456667.1\|235209_235797_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_101456662.1\|213337_214735_+\|CvpA-family-protein	unknown	unknown	gnl\|CDD\|367140
NZ_LT578453.1\|WP_101456664.1\|231141_232086_-\|endonuclease	unknown	unknown	gnl\|CDD\|367881
NZ_LT578453.1\|WP_013954633.1\|219505_220435_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_LT578453.1\|WP_013954631.1\|214848_216765_+\|DNA-topoisomerase-IV-subunit-B	unknown	unknown	gnl\|CDD\|223265
NZ_LT578453.1\|WP_013456603.1\|234826_235096_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_LT578453.1\|WP_014829885.1\|225734_226721_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_LT578453.1\|WP_013954632.1\|216778_219364_+\|DNA-topoisomerase-IV-subunit-A	unknown	unknown	gnl\|CDD\|235503
NZ_LT578453.1\|WP_013954635.1\|221340_222315_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|223348
NZ_LT578453.1\|WP_013456076.1\|224482_224812_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LT578453.1\|WP_101456663.1\|225055_225751_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|223434	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane].	1.98422e-40
NZ_LT578453.1\|WP_013455927.1\|228509_229526_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.28197e-69
NZ_LT578453.1\|WP_075271093.1\|220436_221153_+\|ribonuclease-HIII	gnl\|CDD\|260000	cd06590, RNase_HII_bacteria_HIII_like, Bacterial type 2 ribonuclease, HII and HIII-like. This family includes type 2 RNases H from several bacteria, such as Bacillus subtilis, which have two different RNases, HII and HIII. RNases HIII are distinguished by having a large (70-90 residues) N-terminal extension of unknown function. In addition, the active site of RNase HIII differs from that of other RNases H; replacing the fourth residue (aspartate) of the acidic "DEDD" motif with a glutamate. Most prokaryotic and eukaryotic genomes contain multiple RNase H genes; however, no prokaryotic genomes contain the combination of both RNase HI and HIII. This mutual exclusive gene inheritance might be the result of functional redundancy of RNase HI and HIII in prokaryotes. Ribonuclease (RNase) H is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, archaeal RNase HII and eukaryotic RNase H2/HII). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication or repair.	1.12092e-73
NZ_LT578453.1\|WP_080551570.1\|222915_223944_+\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_LT578453.1\|WP_101456745.1\|239464_239800_+\|HIT-family-protein	gnl\|CDD\|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	9.64963e-32
NZ_LT578453.1\|WP_101456665.1\|232184_234131_+\|transketolase	gnl\|CDD\|223100	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism].	0
NZ_LT578453.1\|WP_101456744.1\|229689_230457_-\|hypothetical-protein	gnl\|CDD\|380149	NF012181, MSCRAMM_SdrD, MSCRAMM family adhesin SdrD. Features of this protein family include a YSIRK-type signal peptide at the N-terminus and a variable-length C-terminal region of Ser-Asp (SD) repeats followed by an LPXTG motif for surface immobilization by sortase.	6.08892e-06
NZ_LT578453.1\|WP_101456666.1\|234193_234748_-\|inorganic-diphosphatase	gnl\|CDD\|179388	PRK02230, PRK02230, inorganic pyrophosphatase; Provisional.	3.38042e-119
NZ_LT578453.1\|WP_101456662.1\|213337_214735_+\|CvpA-family-protein	gnl\|CDD\|367140	pfam02674, Colicin_V, Colicin V production protein. Colicin V production protein is required in E. Coli for colicin V production from plasmid pColV-K30. This protein is coded for in the purF operon.	5.90192e-07
NZ_LT578453.1\|WP_101456664.1\|231141_232086_-\|endonuclease	gnl\|CDD\|367881	pfam04231, Endonuclease_1, Endonuclease I. Bacterial periplasmic or secreted endonuclease I (EC:3.1.21.1) E. coli endonuclease I (EndoI) is a sequence independent endonuclease located in the periplasm. It is inhibited by different RNA species. It is thought to normally generate double strand breaks in DNA, except in the presence of high salt concentrations and RNA, when it generates single strand breaks in DNA. Its biological role is unknown. Other family members are known to be extracellular. This family also includes a non-specific, Mg2+ activated ribonuclease precursor.	8.97394e-51
NZ_LT578453.1\|WP_013954633.1\|219505_220435_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.19348e-56
NZ_LT578453.1\|WP_013954631.1\|214848_216765_+\|DNA-topoisomerase-IV-subunit-B	gnl\|CDD\|223265	COG0187, GyrB, Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair].	0
NZ_LT578453.1\|WP_013456603.1\|234826_235096_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	3.77072e-16
NZ_LT578453.1\|WP_014829885.1\|225734_226721_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	2.84424e-164
NZ_LT578453.1\|WP_013954632.1\|216778_219364_+\|DNA-topoisomerase-IV-subunit-A	gnl\|CDD\|235503	PRK05561, PRK05561, DNA topoisomerase 4 subunit A.	0
NZ_LT578453.1\|WP_013954635.1\|221340_222315_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|223348	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair].	2.47396e-81

>NZ_LT578453.1|WP_014829885.1|225734_226721_-|ribose-phosphate-pyrophosphokinase
MNNNNALLFGMPNCIKLAERISKMINIPLSTLTLTKFADGETMPVSDEAVRGKDVYIIASTSRPVNDNLMILYLFIDSLKRASAKSINIALAYYGYARQDRKASGRQPIGAKLVADFLETAGASKIITVDLHNSAIQGFFNIPIDDLKASFTLAKAIKRSHEKFTVVSPDHGGTVRARSLAELISNDIKISIIDKRRTGINQTEVMGLIGDVKDQNAVIIDDIIDTGGTIIKAAETLKQYGAKKIVIAATHGIFSKGFDIFENNPAVEKVIITDSIDNDELLDKYKKLEIVSLDRFLGSVIDCSINGKSISMLYDKFAKEIKENESHK
>NZ_LT578453.1|WP_101456663.1|225055_225751_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MNHINKEYLLNKYSKQIPLLYRYAQMIYEKNKVMNICGFDSVDEIFNQGILGSILVFENAMNEYNHDFVNKKILDIGAGAGFPSVPLLIALDNKFELVIMESITKRCTFLESVKNEFNLNLTIINARAEEINDYNSYFDYICARAVGSVIKIYLMANHHLAQNGYFILPKGKNYHAEIDEFKNKFTLEKDNISSFEYEDSINNENSSLVLIKKTKPTPRGWPWKWAKIKNY
>NZ_LT578453.1|WP_013456076.1|224482_224812_+|hypothetical-protein
MSRTKKLSISYLITYPIAFIVTVVLLVLYGRQLLDFAQQKEGFTGNLALWTVYLLYAVVIVVPFIMLIINILLIFFNVGTIARILLIVGLFVPWCSFVGALIALIRPGK
>NZ_LT578453.1|WP_080551570.1|222915_223944_+|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_LT578453.1|WP_013954635.1|221340_222315_+|DNA-cytosine-methyltransferase
MGKRGIIDLFAGAGGLTLGFTQNNFDILDTIEFWQPAVDTYNFNFKKNVVAKDITDSEVRNELESNWKNKTDLVIGGFPCQGFSLAGRRSKDDERNQLYKYTIDVISRLQPYGFVLENVKGILSFRESDNELVVDKIQKMLAKENYYTKFILLDSSNFGVPQKRERVIFIGCKDKEKVDKVISLLSKHKEKIVTVFDAIGHLEKVTDDKEIPNHIFSKHSEEIKERFMKLKEGESLSKSFSDAFRKLSYDKPSPTVKENHGGVHVHPVLPRVLTPRELANLQSFPEDFIFLGTKSNVLKQIGNAVPVKLSYEIAKIVNKVFFNE
>NZ_LT578453.1|WP_075271093.1|220436_221153_+|ribonuclease-HIII
MQFLDLDVESSLLENKSIIGVDEVGVGDYFGPLCACAVFIDAQNVNKVAELGIKDSKKLSDKRIKELALKLKNSGLIHYSLAHLNPSGYNKLNKSYNANILKMFVHLKAINSVVFKLKNIKYDYIFIDKYASVDNMLKYYNELVINNNWANFQEINEDILIANKAESYSISVAAASILARDQFLTLVSKMNDEYNTVFPLGAGPKVNAFAKDFFAKHSYDEEVIKKTCKKSFKMNILN
>NZ_LT578453.1|WP_013954633.1|219505_220435_+|Cof-type-HAD-IIB-family-hydrolase
MSTLTNNKKEKFLFAIDLDGTLLSSSRENIVPENCIKAIQRAKDEGHVVCIFTGRPWRSTKPIYDMLGLNTVVSNYNGAQIHNPKDDNFIPHIKYLNLNEMLYILGDQKVKKEISNLAIEGPGWVQLEHRDDDIEAVFGFSSAEKFTVGINLNKVPLSPTGIVFDVKETTDAEELRRYLRARYGDLGEFSYWSKGEGLTPVFDITNVTVNKGRALSLLSRYYGVDLDHTIAFGDGFNDVPMFKVATVSVVLGNAADLVKRHATVRLKKTNKEGGVGDYINKFLDNPEKEIAKSKAMALKMRKVSIQEEE
>NZ_LT578453.1|WP_013954632.1|216778_219364_+|DNA-topoisomerase-IV-subunit-A
MNKKKEQQLNDLLSKIVRENLDTVVADRFSRYSKYVIQQRALPDVRDGLKPVQRRILYSMYDLGLQHNKPFKKSARVVGDVIGKYHPHGDSSIYDAMVRMGQEWKMGHTLVEMHGNVGSIDDDPAAAMRYTEARLSEIADYVIGDIKKNTVKFAPNFDDSEKEPVVMPVLIPNLLINGSTGIASGFATEMPPHNLNEILDAAIAKIKNPAIELSKLAKIIQGPDFPTGGVIYGTDGIYEAFERGKGRITLASRYNVYSDNKYKYIEITEIPYGVIKSKLVHEIDLIVDSEEVAGLIEVKDQTDRNGINILITLDKNVNENVIVNYLFLKTQMRIYYNYNNVVIDNHTPKTMGISALLDAYLKHVKDVKVKTIEFDLIKHKARLEIVIGFLKVAKITDKVIEVIRKSEDSKQGVIDNLMSAFDFTLNQATAIAELRLYKLSKTDEHTFMFEKQELEEKIKQCELLLTNPDEFNNYLVSLFRDLKHKFGRIRRTSIEIEQINSSVNQEDLVKEEEVFLGISKFGYIKKVSKKTYESNLITTYGIKEDDNILFYDIASSLDKLLLFTNLGNYAYLPVFKVNESKWKEFGIHLSDFVDLSSGEEIVSVIKVSDFDVTNYVCMFTKKGQGKKVLLKDFDVSRFSKTFVAMKLKNDDELISAKLSNGLKDVLLITKNNFASLYSENDVPIYGLKSNGNKACYLANGDELVSFTVVKPNDSVALVSQSNKVRLINVSEISRVSKQNKGVSIFSKGRLNNAIVQCDPLLDETKLLLVNNQGQAHFEKIQNYVKQASTKFINFDADDIRTISLISNYSSTTNDNEFHSYEKESSDENQLMNKAIETKNSIDLSIDEILSKVDELLKKDKK
>NZ_LT578453.1|WP_013954631.1|214848_216765_+|DNA-topoisomerase-IV-subunit-B
MSNSNYDASSIQQLKGLEAVRKRPGMYIGSTDVNGLHHLIWEIVDNSIDEALAGEANEIAVILKNDGSVVVSDNGRGIPVGKTPSGKSAVELVFTELHAGGKFNEGAYKTSGGLHGVGSSVVNALSNKLKCLVYRDKHVYETIFENGDNIVQKTHIIGSTNKRGTLIQFWPNYEIFKKAKFNFETIAERLRESSFLISNLSIKLLDEQSGKSEEFKYSNGIKAFVEFINDSKTALFNVYSFKTVVNEIEIECGFQYTDGFNETILSFVNNVKTRDGGTHEIGLKSAITKTFNDFALDEKVLKGKNTFDGEDVREGLTVVLSVKIPEKFLEFVSQTKDKLGTPEAKSAVEEAVSKNLKTWITENKQIAKKILDKIKRASDSRESARKARLEARKTKSALKERQILSGKLTPAQTKNVKEKELFLVEGDSAGGSAKSGRDRKFQAILPLRGKVINTEKARLIDILKNEEINTIINAIGAGIGVDFDINKIQYDKVIIMTDADTDGAHIQILLLTFFFRHMRKLIEEGKVYIALPPLFKLSINKGQKKILYAWDEDELKELLQSKMKGAEVQRYKGLGEMNADQLWETTMNPETRTLIQVRIQDAALAERRVSTLMGDNVDSRKEWINKNVNFTMEDDFEI
>NZ_LT578453.1|WP_101456662.1|213337_214735_+|CvpA-family-protein
MKIIESLENIAFNSWSILIPIILVIFIVILAIVSGLRRGIYGGLIILLFGLSGWIIGIFAAKPLVDVIVIKTKITLPGNKQIDAEILRKMFYGIAMFVIQILFLIVGEIISLLLRKWIKKPLKNMRENKVSSVGSRSLGAVLSTAGIVPCAILTANVTGFLTTNNKVIDANDKMLNYISFKKAEGVSKYTPGLIASAKIGNDLLNASSGSKLDETVIGAFEWYLQQFANPDNYVLLSVSKDGQAKPIISTNALKNINRKEEQEKVLQGLIPFILGDSSVKKNGITLFFNFNTSSAGAFKYDSNSGKIEINTDNSENTQLKVKNIGKISNIFQLYTATPESFRILEYLSKLGLKEAKASEGFDEIYSLVDQTEPVWDILNAAQLKFNMNPSYRIKVYDREYVKRMKDILFDLFEKNTGGKFKYDRKELNEEKMKSWVTIQTIHQKIYWIVSSVIDNVFITPENVSN
>NZ_LT578453.1|WP_013455927.1|228509_229526_-|IS30-family-transposase
MNYTKNYNHLTYDERAFIEIQIKSGYSIRSIARQLNRSPSTVSRELKRNTAFSGSYQCKIAEQKALNRHSHKYLFKFTSNFEYAEFEKFFLEKFDKRFYGIVATARYIKQTFPNIASPSIRTIFNWIKTRKWKLKPRDRLRIFYKKGGKRTASVVSRLIGDSHYVYPIWARPKYIDLREEYGHWESDLIIGKRSNGYDNVLTLVERQTRMGFAVKIKSKSAFLVISKLKKIIQDHNLIVKSITIDNGIEFERMGLLGKWLNIKIFRAEPYASFQRGTNENWNGMIRRMFHKGFDFNSISQVQLDDVVNQINEMPRKILNWQKPIELFKLANDYGVVLN
>NZ_LT578453.1|WP_101456744.1|229689_230457_-|hypothetical-protein
MPNKVVITGFKDSLINENIIIKPEPIPPINHEKPIMKDTETNTNDESSSSSTSRTDSGTQSDSPASSSSSSTSRTDSGTQSDSPASSSSSSTSRTDSGTQSDSPASSEPEKANSELSNERKIKEKGYRLNELTAYPYDLIDVDDDANKDELAKKLNDVITHKNGAIAIVGGSFFSKCNNLQLTGLSINKSIKSETKSQISTHNKLIGFFEGSDGYGIKVGHHGEANSKKYLFKWRLVKEDGNFGPKVYEQIIDLS
>NZ_LT578453.1|WP_101456664.1|231141_232086_-|endonuclease
MMNSKMIKHKFLVSLALISAPVLSLTVLSSTGCNNKNSTTDDNYLIPEKSFYEKSNYYDSLEGLNGNKLYSELIKIQHNHLSGIKSYRYLKTIYKDAFKDLYYEKDGSLLDIYSENPIGKDPYNYSFNDSGSSAKNEGLGFNREHLVPQSWFKKEKLARQDAHHVWPTDILVNNKRDNYPFGKVTNAIFTSKNGTKIDNYLAEPIDEFKGDIARAHLYFAITHASRYKMHSKGNDVFKFLDNKPLVNKYFDTYTKWAKKDQINLFDIVRNNEIAKHQNGLRNPFSDYPELIDLIINPGNKVFVNKGILKSNIAV
>NZ_LT578453.1|WP_101456665.1|232184_234131_+|transketolase
MNINQKVVASMQAIALDSINNAGGGHIGSAIDICPIMYAVVAKHMKISADHPKWISRDRLILSAGHASMSFYSMMHFLGLLSLDEMKNHKRKHSKTPSHPETDAFDFVDASTGPLGQGIAMGVGMAIAEKKMSLKINKGNTKVIDNYTYVIAGDGCLQEGITHEALQIASVMKLNKFILIHDYNKIQLDTKVSDVSNVDLFAYFKALNFNVIEINEASYDNIDKVITEAKKSDRPTYIMVHNIIAPFTPFENTTKGHHGILNSEQTIEFKKAIGLENKAPFEYDSDVYEYGRTIMANKAKSYDEWLVELDNHKKQFPWIHSLLLETINNETNYDFSNILVKQDDLAIRDYFKAFSEIVDFSYPFLIGGGADVGSSTKVRFADSILDYGQRIDYGVREFAMTAINNGINLYGGLKTADSTFLAFSDYAKGALRLGGIMKLPAVHLYSHDSYLVGDDGPTHQPIEQVTVLRSIPNLIVIRPCDKYELVMGLNYAYNNTSTQVAIIGTRQPIKTMHSSKFSEFMAASLIYENKEFDISILSSGSEVELAYKTAVELKNLGIIANVISVPVLQKLVDNDELAIKLKLDKKPMFALEASNDSLWYKLSKYNKIDGHFASEYGFSDKGNVVYDSMGFNVNNIVDKVKQFLSKNA
>NZ_LT578453.1|WP_101456666.1|234193_234748_-|inorganic-diphosphatase
MSNVIEIKIEIPKNSNIKYEYNREDGQIHVDRILRGDFKYPCNYGFIPNALDWDGDELDVLLYSPETFIPGVVVNARIIGAMKMNDSGETDTKLIAVHDDDYRLENINSLKELPEPFLLEIETFFNNYKNWKKPNLTKVLGFEDEKWAFAELEECKELMDKYGKMPKKEFVAKMMKEHPEKYTF
>NZ_LT578453.1|WP_013456603.1|234826_235096_+|30S-ribosomal-protein-S20
MANIKSKVKSIAKQEEFRQRNNAMKTRVRKAIRAAREAVLAKEEGFEKKVFEAHSIIATAVQKGIYHPNKGARKSSRLDHFVNEQKSKQ
>NZ_LT578453.1|WP_101456667.1|235209_235797_-|hypothetical-protein
MQMIVKTAAIEVLRELQKLLESENINYSLGLSNYYEYKNKPELFLINDIEVCLWHKDFYFLLKKYPNHFILPENLPFKSLAPYYKFQGSSIKINVIVGTSDEKINHWYKFRNYKRLIYWGNSKKHWFYYFLGHRTQRVYLHDLVNDLVVERYTKFIILNSEIDKFKAFDNLNFNKRFFVTEKGITIPFFEPFRFL
>NZ_LT578453.1|WP_101456668.1|235890_238068_+|hypothetical-protein
MGKKKTPFFERLLQKNAEQENKNKTTGKSKKSRSWKIATTSTVLVLAVATGITVPLVINSTKKNFIDGYASNTNVASAKIGDHNLDLNFGDFKDIYQNHNTSTSEERLKEIDKIILYYLYDQEQKASAEYQKLWNDSKRSDEKDNNSFRLPTLDELKTKFKNELVDIENNMKLQFGTANWQTEFNKHLVQKYNGAKNIDEAVKNKTFEHIKTDALRRFRLTNGDSKKDEIERKSKDGKHVFGWWHKDNNENKFIELEDKSKLALATDSFVFKDSYKSIDPFIDSYIANEKPRIISEFTIPGIAPAKKNEKWKIDKNIFLRYLFYAKQDTFGLKKVTKGYNVVKEKFNSFDHYIKSVVSKTNGNNIPPDEAIQYSSILNMFSTSKEDIKKNWGTSGLTSISELVTGDNFQKFLANNTKLLFGDNYTDSNSGSNSQKPKEINLFNEIEKIKVEIDKFVNKNGNGVDSSSSGGSSGNGNETVLNNEQAAEYNTKLEKFFTEVNESQNKGLTEKVFEENILKKFAEIFETSGKIQTVYNVKFDNNGSNGAKNVKGILSPEGFKLLIFGNEIKKDDLVKMIKNDFILNSKYKKQLGVRYNALQKLNKQLSRNEYILKMLQDNVFKKYLKTQNNNFATDQNGKKLENVKYNEQSINDLITSLTVAIQFDKISNFIKLSKAAAAWIETRAKNSYDELFELKDGKAYFKYNKDKTAASLVLEYLKKEFNLEAK
>NZ_LT578453.1|WP_101456669.1|238079_239465_+|hypothetical-protein
MKKISKKLLASFSLFTIPSVAIISAKCGNDVETTERLNQQKDLKDAKRVAELEEIWKNFALSYIYKLKPSNKHDAKSWKQNFEKEFKNQQSQLFKDSYDAYKIFALDQLSKNEYYFVEKSLEWKKNDVFKSNPFDWISTKNFPGEQKPEDFIRIWMEDKTGIRKEINNMLLVKAYFGISDLKQLQTIANNIANAGKADKDKSKDQKFEYFVGGKDAKFDLEHYNLVKYAFENKYIQLWKRTFDDKTTSNDLFTKKEIKNIISNKDDFNAFFKDTAEAEKKAKEWEIITKNTEDKELQGYAGIQKDPGTYGLNWNETDNKKRVTGSGTYGAYDALNSILISFNDLRSNGSSVGVKDKDGKSIVSYINQIVPVGKKTKLKTKEDYTKDKVDDSKLKETEVLSFEGTIYKENLNKLAYLFYGKDAKNLLEKAIEAFAHLGVKIKVNKEIASLYEQLKNKVWVEK
>NZ_LT578453.1|WP_101456745.1|239464_239800_+|HIT-family-protein
MDDLFLKIISGEEEGKIFYEDEYCVAFYDKFPIQPGHFLVVPRIKSKNITEADDFTAGHLINTARKLGKQEVLDKGIAGFKILINTGRSADQSIFHTHVHIIPYKEKSKDN

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Crispr_ID: NZ_LT578453_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT578453_2

621000-621106

Orphan

Consensus_repeat	Method
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT578453_2

>merge|NZ_LT578453|2|621000-621106|CRISPRCasFinder
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTTTGTGGGGCATTGATTCATTTTTTTGATTTTCCTCATTATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT

>NZ_LT578453|2|2|621000-621106|CRISPRCasFinder
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT	TGTGGGGCATTGATTCATTTTTTTGATTTTCCTCATT
ATTTTTATCTTGTTGATTTAGGTTGCCTTGATCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT578453.1\|WP_013456157.1\|626325_626760_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_LT578453.1\|WP_013456339.1\|618823_619645_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
NZ_LT578453.1\|WP_013456160.1\|621351_622059_+\|MjaI-family-restriction-endonuclease	unknown	unknown	gnl\|CDD\|370566
NZ_LT578453.1\|WP_013455924.1\|627394_627727_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380386
NZ_LT578453.1\|WP_013456498.1\|616166_617414_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_075271114.1\|606725_608954_-\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_LT578453.1\|WP_075271119.1\|631972_633835_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224196
NZ_LT578453.1\|WP_075271110.1\|600109_601621_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_013456078.1\|626761_627169_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_LT578453.1\|WP_075271152.1\|611670_613881_-\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_LT578453.1\|WP_075271146.1\|601674_604251_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366776
NZ_LT578453.1\|WP_080551570.1\|624864_625893_-\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT578453.1\|WP_013456083.1\|617547_618735_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_LT578453.1\|WP_013456635.1\|627728_628616_+\|UTP--glucose-1-phosphate-uridylyltransferase	unknown	unknown	gnl\|CDD\|133021
NZ_LT578453.1\|WP_013455983.1\|623308_624271_+\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|224383
NZ_LT578453.1\|WP_013455979.1\|628990_631723_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|223550
NZ_LT578453.1\|WP_075271115.1\|609028_611638_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|366776
NZ_LT578453.1\|WP_013456269.1\|622066_623125_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|334588
NZ_LT578453.1\|WP_075271112.1\|604280_606530_-\|putative-immunoglobulin-blocking-virulence-protein	unknown	unknown	gnl\|CDD\|275319
NZ_LT578453.1\|WP_013455970.1\|614066_616031_-\|NAD-dependent-DNA-ligase-LigA	unknown	unknown	gnl\|CDD\|223350

Protein	Function_ID	Function_description	E-value
NZ_LT578453.1\|WP_013456157.1\|626325_626760_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	3.78069e-82
NZ_LT578453.1\|WP_013456339.1\|618823_619645_+\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	1.9574e-40
NZ_LT578453.1\|WP_013456160.1\|621351_622059_+\|MjaI-family-restriction-endonuclease	gnl\|CDD\|370566	pfam09568, RE_MjaI, MjaI restriction endonuclease. This family includes the MjaI (recognizes CTAG but cleavage site unknown) restriction endonuclease.	3.88844e-32
NZ_LT578453.1\|WP_013455924.1\|627394_627727_+\|hypothetical-protein	gnl\|CDD\|380386	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain. This family includes bacterial and some eukaryotic proteins homologous to reut_a1446, a Cupriavidus pinatubonensis protein of unknown function that may be related to mannose-6-phosphate isomerase. Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold capable of homodimerization.	4.68782e-17
NZ_LT578453.1\|WP_075271114.1\|606725_608954_-\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_LT578453.1\|WP_075271119.1\|631972_633835_+\|ABC-transporter-permease	gnl\|CDD\|224196	COG1277, NosY, ABC-type transport system involved in multi-copper enzyme maturation, permease component [General function prediction only].	9.34742e-10
NZ_LT578453.1\|WP_013456078.1\|626761_627169_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	1.79038e-70
NZ_LT578453.1\|WP_075271152.1\|611670_613881_-\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_LT578453.1\|WP_075271146.1\|601674_604251_-\|hypothetical-protein	gnl\|CDD\|366776	pfam01732, DUF31, Putative peptidase (DUF31). This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function.	1.7892e-53
NZ_LT578453.1\|WP_080551570.1\|624864_625893_-\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_LT578453.1\|WP_013456083.1\|617547_618735_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_LT578453.1\|WP_013456635.1\|627728_628616_+\|UTP--glucose-1-phosphate-uridylyltransferase	gnl\|CDD\|133021	cd02541, UGPase_prokaryotic, Prokaryotic UGPase catalyses the synthesis of UDP-glucose. Prokaryotic UDP-Glucose Pyrophosphorylase (UGPase) catalyzes a reversible production of UDP-Glucose and pyrophosphate (PPi) from glucose-1-phosphate and UTP. UDP-glucose plays pivotal roles in galactose utilization, in glycogen synthesis, and in the synthesis of the carbohydrate moieties of glycolipids , glycoproteins , and proteoglycans. UGPase is found in both prokaryotes and eukaryotes, although prokaryotic and eukaryotic forms of UGPase catalyze the same reaction, they share low sequence similarity.	5.35032e-119
NZ_LT578453.1\|WP_013455983.1\|623308_624271_+\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|224383	COG1466, HolA, DNA polymerase III, delta subunit [DNA replication, recombination, and repair].	3.3171e-21
NZ_LT578453.1\|WP_013455979.1\|628990_631723_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|223550	COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism].	0
NZ_LT578453.1\|WP_075271115.1\|609028_611638_-\|hypothetical-protein	gnl\|CDD\|366776	pfam01732, DUF31, Putative peptidase (DUF31). This domain has no known function. It is found in various hypothetical proteins and putative lipoproteins from mycoplasmas. It appears to be related to the superfamily of trypsin peptidases and so may have a peptidase function.	1.79194e-50
NZ_LT578453.1\|WP_013456269.1\|622066_623125_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|334588	pfam01555, N6_N4_Mtase, DNA methylase. Members of this family are DNA methylases. The family contains both N-4 cytosine-specific DNA methylases and N-6 Adenine-specific DNA methylases.	1.0519e-31
NZ_LT578453.1\|WP_075271112.1\|604280_606530_-\|putative-immunoglobulin-blocking-virulence-protein	gnl\|CDD\|275319	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein. Members of this family are putative virulence proteins of Mycoplasma and Ureaplasma species. Members share a region of sequence similarity (see TIGR04524) with protein M, a Mycoplasma genitalium protein that binds a conserved light chain region of IgG and blocks its protective function of antigen-specific binding. The seed alignment for this model includes an N-terminal signal-anchor domain and a proline-rich linker domain, and a C-terminal extension, in addition to the protein M-like domain recognized by TIGR04524. [Cellular processes, Pathogenesis].	0
NZ_LT578453.1\|WP_013455970.1\|614066_616031_-\|NAD-dependent-DNA-ligase-LigA	gnl\|CDD\|223350	COG0272, Lig, NAD-dependent DNA ligase (contains BRCT domain type II) [DNA replication, recombination, and repair].	0

>NZ_LT578453.1|WP_013456339.1|618823_619645_+|DNA-binding-protein-WhiA
MNFTKEIKLEILSKKRNIDDASEFLRGYIYSKCIIDNDIIKLRIYDKSTKSTVLKSLNKIGIKYENKNTVILINKDNFSLIEDFSYPSSFFQGVFAGNGSISNLNNSSYHLQLASNYEEFIDIIINKLNEYDFNFVKIKHNNKFIAYIKKHEKISDFLKAISVTSSFFNFMDNTISRDFLNNTNRLRNIDASNINKIVTASNKYIKNIDLMYELELENKFNDDQLKLFQIMKENPNESLSSIADLYAYKENKSISKSGIYHWLKKLEKTVMKK
>NZ_LT578453.1|WP_013456083.1|617547_618735_+|phosphopentomutase
MAKFKRIFMIVTDGLGIGPDKDQKKFGDAGANTLYSASLSSMFFIDTWKKLGIGNVAQLEGNYHVKSPLAYVSRIQEVSNAKDTLAGHWEMMGIKTEVPFPTFTETGFPEDLITELEKAFDNRKIICNKAGSGTEIIDQYAEEQKQNGSIIVYTSNDSVLQIAAHEEWIGLENLYRYGKAAREICSSKPEWNVGRIIVRPFVGEDGKYTRTFNRHDYANAPEPMILNKLQEAGIEVIAIGKINDIFVGQGISRAIHSSGDADGMDKAIELAQLDEENKFIFVNLVQFDSHYGHRRDVDGFASNVATLDSKLGKLIQVMKKDDLLIMTSDHGNDPAYPGFNHTREMLPLTIYSKLFKEPRVLNDVTGLGTTGNIVARNFGVETVSLTGEDIFDKLV
>NZ_LT578453.1|WP_013456498.1|616166_617414_+|hypothetical-protein
MSNFNLILSREKFNHQQYASVKGIVKSKLNEYYSDKKNSRKINLATVGIYTSIPLFIIGAILLLSSITISFVVIFKTGKNEWLLNPDHFRPLLASLYSLSFVFLIAWCILYPIALRARIFLKKDIVASVNNRDLTDHLLDYINLKPRYENDENGNKIVNFGHISFFKNTSNFKNLSKFNVINNKYEMYEALSNKQFIKMQNIEYRNEEWLAINNLSNKEIKRLKKAKAKVYKGKIQRIEHNLYFGIATKLLNLNKSVSVTLFDEFNNYTPESFKKLDVKDEFSILNISSEDTELMQKWANDISNLSYLNDLKNEFDSIAINSSISLKNSRRDKSFAKDLSIFIKNQEAFIWFKTPTQLLDLSFKSPTLNKDEITELIVNKILDEFYLVYLSLMFLAPFGYDNVVSIDENETIVNQ
>NZ_LT578453.1|WP_013455970.1|614066_616031_-|NAD-dependent-DNA-ligase-LigA
MESKNAKELIKSLVDKINQWNYEYYQLNKPSVSDLEYDKALWELEKLEKEYPEFVLDDSPTFKLGSFASEKFTKFIHKKPMLSLAKAYSYDDIKSFINNISKIVPAERINFNIEPKVDGLSIALHYKKGKLVKAVTRGDGTEGEDVTENIYQIKSIPKLINYLNDLEVRGEVFISKDNFKKINESNNFANARNAASGTLRQLDSTIVAKRNLSAFLYEVVEPEMHNINYQNEALEFMKKLNIPTNPFSKVVEIEELEEAISDFAEIKNKLDYDSDGLVIKLNDLQMWEKLGKTSKFPKHSIAFKYDVEVASSTIVDILTSVGRTGKITYIANIHPVILNQTSVRAATLHNHNFIKDMNININDEVNIIKAGEIIPKVISLKNSKNYVDYYKKATNCPSCNSELIEFEGIVDQFCTNDECPEKNVNNIYHFASRNCMNIVGLGLSTVKDFYPKFIKKIKDIFSLYKYKSELILLPRYGEQKVDNILNSIESVKNKAFSKVLFALGIKHIGQRAAKLISDNYVNFAEILNDSELSKLKSTKNIGPKIIESLTEYINNPLNKDLLIYLDSIFNYEGKTKAISNIFSGYSFVITGTLSEPRSHFVKIIEENSGSVSASVSGRTSYVLAGSEAGSKLEKAYKLGVKVINEEQFYKLLEH
>NZ_LT578453.1|WP_075271152.1|611670_613881_-|putative-immunoglobulin-blocking-virulence-protein
MNLFRKKKNRVIILSLATGAVISASTGAFVYSSNSDSNLSKLLFNNSRDAELASNKNNISKSTDSIKDNNVIENTKPIAPKPVEEKVINVPDTTTENSSAPEVNRNTVTPERSEPLIAKPNVVTKQISIHGVIVNATIEVVPDRHISDYDKNKGISNINPYQNIIVSKVLNVEVTKELIDKSVSNALDGKDGTGLFAGTFFKTLENIFKSSSDLATAEEVVKQNMSVYRDNIHRYEKLLNSPNVINFLTEEGKQKYPTMKFDSPIQRNIWLINHLDKTKFTKLAKDAEAFLSQGLAISGRSAIINEDGTLSSLAFAPDDQFNTVTSRVSRDNRERRVFGYDSPYGRSPDSVWEGSYQGWNKEDVTDKPEYSRYNVSSADGIKLTKLTREKTDNSPGALNEGLVVEIDASNVSGYGKTLDLINKLKNDKVQVTSYRIKNMGSNDPSQAFKKILSALPDKIPQLELFFSAEATNNSSLIALENKHIKELSLYTLGNSLLHKWSFNPLALRKTEWINTVDYNVSRDFLPNTAIPTRITFDTIAFDKEDFKDKSFDRINDGLRMVYFARNNEPFFQAGLGPGLNPDHNEGNNSYPVGIDFSRIEGIKSLRNLVFNDVVNPNNTPRKIRRLTLFNNKPSFEISSDELTHASFEHFATDAMDRFSKPKIMFSNGDVTVSIRISDSNTLDSKAIWNLSKFFEYNEKLKSTKSIKVPENASALKEQLTKLGYRVESSDGNITYT
>NZ_LT578453.1|WP_075271115.1|609028_611638_-|hypothetical-protein
MRITKKLLLISSSASLFSSLLIAAKCNNDSSKNKSNDDKKIGLLSDDQFEKLINNTNNLNDIAQLTFSSNFGQSKSLDKTLPTEIEENPGNLKISVNNKYSDSITVTVNGAKTDKDASRNISNIKGEVSVYVGFKNKSTGKEIYKNFILKGLARNPVGADHNGRLSGDPLAAIGGQQGYLDYHKKTQTERFEKDNNEYVNRLKGMLSRDGGKEVDFKTFMGIKTTEEQIKKFNETAKLVNFDSYENAALKGFTIPVYENGSTSNPKLKVYDAPEVPKGPSPIDTIGRNIYRSNGLARTLLNETYKTIAEQTFQVSFTTLKDFEDEIKEAEKLKEDSKKWTTEQFQQFTFKDRAALKANYETNLYKLELEIKSQSPEALRGLEQSFAERKKKLKENYEAEDARLEKLDSSELAKEMDKRIAEYNKLKEEKRTYSSVSGTMWIMDFMLPENSGKGATKFYFGTNSHVAKGLTNKTTKFSVSRLNENVGVGSHFRLNDLDDRFTRFSFDNVEKDAINVIFQATDFLDSKPSDFLESSQKAKFGDVEEFMDFAVIEIDFEKILENKTKNFSAISNNKNHSSNYLNKSTEDIVKLITNNYESKKDKHIKFRSESYLKDYSKIDRPIILDTKKKEEVKKFNDLDSLYILGYPSATGDYFLENYIDEDQQKVVKTNFSMWINADEKYYKNVSAQEGAPSNHPKENLERGEFLSYEIGYRSFIDKPGLTDGFLAASRTGNDLYTINGKKYFNYGLHIMPRSYVPYGGASGSSVRNKNNELIAVFHTANNSAKTGLAATFRSYGYDYKGLFGDYKLPAYDLIYGGAPGQKNSYRDALEKKYKKNGKQYKTNLFQKGFSKDQIPQQFKFNETSSTTVDK
>NZ_LT578453.1|WP_075271114.1|606725_608954_-|putative-immunoglobulin-blocking-virulence-protein
MKILKTKKNKILMFSLLSGGIVSVAAGAAIYKASSDFDLAKSIFSSDSFDSELANSNNVKHTNDSIRDKNVTEKAVEPIKVEKPKIEPIIVKTPKAEESATIEPPKEAPKPVESQPIIASPTTERRKININGVEVYAIVEVTPDRKVTEYDIKKGIANRDPYQSTIVNKLVSVEVTDQLRKSTVNKALTSGDGEGLFDGTFFKVINDLINVDKDSLDIAEGVLKQNSQIWENNLFRYKELLDSDKVVNFLMPGKDVEYKDIVKKGGFKTPNQRYIWLIANLDKSKFTKLASKSDKYLNEGLVVSPRNAKINANGEIDAHAWSPSPEFNTVTSRYSRDNRLKRVFGYNSHFWRSPADTEEGNYPGWNKTDATSEFKEYGASESDGITVHKLERIEKIKEEDGQINEGYVVNIDAKNPAGYSKTKKLIEDLKKSGKKITSYRIKNMGEADPAQKFKEILAALPDDLPQLELFFSANATNTSSLIALENKKIKELSLYTLGNSLLQKWSFNPWAFKKTAWINTNDYNVSYEYGRNKPLATRITFDTIAFDQDDYKGDNNFERINDGLRLVYYARNNERAFQGSFGPGLNPDNAEGNNSYPLGLDFSRVPNIKSLRGLEFHDSQNPSNKARKIKRLTLFNNSATFEITSNELNQASFHHIMEPVPGDSDKPKIMFSNGDITNSIKISSKEKLSPDGLTNLNKFFQLNDALKASKKIIVPKDASELISQLQGAGFNVEAGTESIIYT
>NZ_LT578453.1|WP_075271112.1|604280_606530_-|putative-immunoglobulin-blocking-virulence-protein
MSIFKKKKSRILLISLSAGIVVSVSSGALIYNASSDNSLSKLLFSSESDSLLHPSSSVDYSKTVNSITDKNVKELSKQPKVIEKPVEKIEKITPPKIEVKPEEPAATPEPPRITPEIPNYKPDVTSLIQRTEKISIFGVEVNATVLARPDRVVSEADKSRGITNVNPYQNVTVSKLLNIEVTQELENKVIQNALGSEEGQGLGLFSNNLFKIADSIGTKDGLDKAEDVLVRQNPGTWGEQIHRYKALINSGKFKDFLKEGKLEEYERLVKENSFKTANQKYLWIIINLDKSKFTKISQNSLNYLKQGLAIDPRNAIINANGEIDSLVWNVPNQYNTVTSRLSRDNSTRRAFDYDEWYLRSSDSIVDGKFPGWTKNDKTSEYSSTYNIQPNDGIKVFELTRDKPVNDGSKRNSGIVVEIDAANSSGYNKIKELIEKFKANNKEITSYRIFNMGVTSPSQEFKDILKSLPDKLPQLELFFSAQATNTSSLIALKDKNIKELSLYTMGNSLLDSWSFNPWSLNKVEWINTNDYNVSAQYPPNTPIATRISFDTVAFDQEDYSKVGDWERINNGLRMVYFVRNNEPFFQGRHGQGTEPDSSESGNSYPTGLDFSRVPTIKSLRGLVFHDIEKPNNGSRKIKRLTLANSGDSFEISSDELSAAGLENLAIGELEQPKIFFSNGQETKAIKIKLESGKKELDSSAIENLRKFYAYSDSLKVGGKSIKVDSDATELKQQLTGLGYKVEEDNGLKFT
>NZ_LT578453.1|WP_075271146.1|601674_604251_-|hypothetical-protein
MKQQNKILLIASASILSPASVVVAAKCNISNKPNSTTEARISDLSSEDFKNLIEKTNDYKSLVTLQFGSSGRNIPLSELLPSQIEDDSQNLRVVVNDKYADVIDAIVVNATTEKKLPTIISNVKGELSVSINFKNKKTNENIAKTFKVTGLKTNGGLHHSGLILRDPKDSFDGAGGFNNYLKWNQNQRFEYDNKLYINSVRNWWGGGDILKTRGLNATDEQKKKFDALAKTVGFDSYENAAIKGFSLPVYGSNGQVSGLRLFNNEVGKIPSHVDTLGRELPKTNGLARTIPNKTYQTIAKQTYQITFSFKKDFKRELAEIEENIKFFESKNDQQIKDYLDSQIQILTGNHKFALNEIEKKWASLSEEAKRGLEDSHKREIEEENKKYEAEKVKYSSWKKQDLINWQNEEKLKIEEKKKTGQLGDRVSGTIWIMDYQLPESGKTATKFYFGTNSHVAKILKEHELTGFTLSRVNENVGIHSTFKFNDLDSNFKKFSFTNPKDMISNVFDAVDFMQTSPKDYIDESQKEEYKDTEEYIDFAVIEIDFEKLNPSEVTIWSENRDIGNTIPKKDDKYELIKLITNNYEKDTKNHVKFKSKSYLDSYDEIDVPLAINDKDPNDIKKWNEKEGLFILGYPRADRDFYLDRYVDADAIKVVKENYSLWVNGDHKWYKKLATPEGQQPAFPEYTINNGGRLSYQIGYRTFTDKPGLTDGFLAAPRIGKEFYSITDKSDGKTVKYVNYGLHLMPRFYAPYGGASGSSVRNKNNELIAVYHSSNDRAKTGLAAVFRSPGKDYNKLFGNYNLPQYDLIYGGGKDQKNSYRQALEAKYKSMNGNFKTKLFENGLAEDNVPKEFRFKNSTK
>NZ_LT578453.1|WP_075271110.1|600109_601621_-|hypothetical-protein
MHSKSINIEEKRIYDDSQSLANKQRKSFIVTLYKSLLLSYFFISMLCLLFLMPHGLFSKKIIRSYAFIFDFSLLTTLDANWIFIFRLCLFGFIYFYGLLKAYLNINKNKEHIRIYGIWFSIYWALSIAGFLLFFTYHTIEVKKLVYVLFALVIFLLTDISYALFNFNTKNKTEPVIYQSKIPLVIDLISRILLTAITLAVFFGWAYSYTGSPNTIVRMFALANENNKNIPYNAFYTTAFKLFKVKSALNFIIVILMSLVIGLLLLGLKIYSIWSLAYKQLRSQIFKDRLQLYLVGILSSVIWLLSLFKLKYPPTHELFGQAESLQYLNILFGLFNLGAAIGFIALLFVKRIKLNSILIKTTIMALFQWVIWTSYMIANFINKQPTIALVNLLLTALSSLVIFYFYFRKSKLSAISNSLAISLNTILLFILILVFGFNQVLLAENNKSLIILSTNLSVAQVISIIIVLFQMIYLTYSLTQLILVIKKTSVLNDEVIEKRSYEKA
>NZ_LT578453.1|WP_013456160.1|621351_622059_+|MjaI-family-restriction-endonuclease
MKTKQNDDFRYEAIIQNSECLEKINFPKYFSPIVNLANQFTKATSPKNVGQLSELFKQYESYIKSQSSNLIPSVRNWEEYYETAVIEYGFSKDEAVDNAINKIFSMLKNFQNMLNSYDEQSLKNDVGVWVKKLMFEKTFTGLSVQKLIVEHIIKLTGCNYIWRLSTASEESLNIDAFINGKPIQIKPISYEHKKITKAIENIQIPIIEYNLNKNDGNIKIIVSNIKELKDYLKSK
>NZ_LT578453.1|WP_013456269.1|622066_623125_-|site-specific-DNA-methyltransferase
MHTKHTILNIDALKMNSHIDDESVDLVITSPPYPMIKMWDEIFEINENEIKTEADVNSAFLKATQFLNNIWEKVDKSIKPGGIVCINIGDATRNLGGNFRLFSNSGQVINFFIKKGYLQLPSIIWRKQTNAPNKFMGSGMLPAGAYATLEHEWILIFRKGITKREFKNAKDKSLRNESAFFWEERNVWFSDLWDFKGIKQKNDIKNSRDRTAAYPIELPYRLISMFSVKNDIVFDPFLGTGTTTLASMLLQRNSIGVEIDKSLCNHFKEYLVKNDVKLVDNFNDKISKRISSHTEFVKKRVNEGKLLKHYNSILGTEVMTSQEKFISFNKVSSINKIDDKTFEVIYKTLQSE
>NZ_LT578453.1|WP_013455983.1|623308_624271_+|DNA-polymerase-III-subunit-delta
MIFIYGPEKFLIEQEVQRIRKEHNDKVLEIFRFDDQASINDLISSASSNNLFTGSKLFLIYALPFFDKSILKDDLKNADDLINAINVNNQDIFVFINENIISKDKISVNSWTKFIFENNNHEVTMIEAKEISESKLFSLAKSLANKHKLHIDDEAIKLLINKVNNDTLMLSAEIIKLSNLEKHISAEVIENSTDTMLGDDVFAFSNALETNDLGIIWSKYKEKMLEGTEISALIGQISQIFIIAHQIYAYKVCHLSIDQLSRDLKLNSYRIKKISYFLSKIGINKIKKMILSLSKLDKDIKNGLISEKIGFERFLITFFN
>NZ_LT578453.1|WP_080551570.1|624864_625893_-|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_LT578453.1|WP_013456157.1|626325_626760_+|50S-ribosomal-protein-L13
MRQTTIVNREKANKKWFVVDAENQVVGRLAAFVASVLRGKTKPTFTPNADMGDYVIIINAEKAIFTAKKEEDKVYYHHSGYPGGLKSITAAKLRAKKPTAIVEKAIHGMLPHTKLGNKQRRNLFVVAGPEHKYAAQKPERLEVR
>NZ_LT578453.1|WP_013456078.1|626761_627169_+|30S-ribosomal-protein-S9
MAKSNSSMIEYRGLGRRKSSTARVILRPGSGKFTINNREAKNYLLSDLHIQDAEQPLVLTETKGQFDILVNVRGGGLKGQAGAIRLGIARALLLASDTYRAKLKPAGMLTRDARSVERKKPGLNKARRARQFSKR
>NZ_LT578453.1|WP_013455924.1|627394_627727_+|hypothetical-protein
MDNNVKLINNIYSNNLIKPILGCEKFYNIAQLGNSNIELIYSNSASTDWLINNDHDEVAILVQGSASLLDDSHKKINMQAGDCLFVKKNSRHKILSTSADAIWISIHNKE
>NZ_LT578453.1|WP_013456635.1|627728_628616_+|UTP--glucose-1-phosphate-uridylyltransferase
MNKKVRKLIIPAAGWGTRFLPMTKVVHKELLPILDTPLISLLVDEAIEAGIEEIILIISERKKDIANYFAVNKELETELESKNKLSLLKKVKSTNKEGLIKIVIQHSQNGLGHALACAKNVIKDEPFAIILGDDLIKSKVPAIKQLIEFYYKTGSNILGVQSVSDSDIPKYGIVAPIDENEKSTNFFKIKGAVEKPKLSEAPSNKAILGRYVFNSEILDILSKIEYDGSNEIQVVDAFEKLQNEYKQDIYAFVFEGTRYDLGSVKGFVQANIDYALDNIELKDELTEFINEKLSE
>NZ_LT578453.1|WP_013455979.1|628990_631723_+|cation-transporting-P-type-ATPase
MKWDEAQKFNGLSDEQVAINLQKYGENTLTKSKKINPIVAYFKQFIDPMVILLIIAAIISVSLAIFEHIKGSRNSTQIIIGYVEPAIIMLVILLNSAIGAYQEVKSDQAVRALENKTISNSTVIRNNEVQNIPANMLVVGDLVLLSAGDTINADGRIVNASNFYVVESSLTGESEAVLKTTNWNATDDKTLAENKHLVYSGTFVSNGKASYIVESVGKETQIGKINSSLQNQKKNLSPLQTKLNKLSKWFGYSGIILLFISMLLQIVFNNVSSGSWTNPDVYTNSLITGISLAVAAIPEGLIAFTTVILSIGVSKISKEKGLVKNLLAVETLGSANIICTDKTGTLTENKMTVVDLYLNKKGFLDKIDVNRNEFNELLNSLCFCNDAYLTIDNEEIKEIGDPTETGLLLFALKHSVTKQELLKTNNIIHTLPFDSDRKMMSVLVKDNKSDKIMITKGAPDVVITKCNNIDKDEVMQINNDWAAKSYRVLAFAKKTVNHNSIDFKDEEDLEFIGLVAMIDPPRANVAKSVLEAQNAGIKVVMITGDNLITAKSIATNLGIYDPNGDDICLDGSELKDWDDDKLRNNVQKIAVYSRVNPSDKLRIVKAWQSYDKVVAMTGDGVNDAPALKASDIGCAMGITGTDVAKQSADFILTDDNFNTIVRSVKNGRQIYDKVKTVIMNLLISSVTEVIVMLIGLIAFYYAFKNYFSDSEFYVFSASQLLWINLLTHGLPAIALGIIDSEVDVMHRPPYSKSESIFARGMGINLLWQALVISLVSLLSYTAGALYTIRFYSGLNLLTIASTCAFVTMGIATSINAINLINNNSIFKANIKKYWPVFAAISFSSLFVILVAFVPNLAKVFRMYEHLLTFHNGILLSWSLPLAFVNTICFEIKKLIVNTKTNRTSVLSVSY
>NZ_LT578453.1|WP_075271119.1|631972_633835_+|ABC-transporter-permease
MSTSAFKYSKFAFNITFKKISTFILPILVLAFSLIIGLVYKFVVGQRYYDLAAYIFIFTNATATVIFSSIKALNIFKDFDSEGLEIITLSKPISRNNLILGKLLTLIYFGLIWSLVMLIASLFGLYAIFGVTKIFLVAILFLFVGLMTYLLFGLFTALICYKLSQKIAITIPIALFIPLALGGSLISANSTSNINNAAHFINRPYQYHASGNEANIEPYYLNNNKDELLLVPNGADNKGFSDEQIKYLQKVMNLSNNSSTEWQAYSWLSVPYQLIDIFNFKNKNVFETASVKKFSNLDNYVYHSGLDDVTYNYKLDTNVNLKKYITTDGSNSPKYIVPGALKSNSIFSDKTGDNGLFNYDIIYARAGAEDPNIEFLEDDANFSNEGANLVGRIKWRYIYEALKDEKFNSIAKNFVEKFNSKIVSQNNLVEINKLLMSEINSFINNDDIDNASEINKYENANVTIFDPNALKQKKLKSIFEKRIYFTVALLNYIYFNYSETKIYEAMLKNPNTKESFGNYQYTVNILGHDYKIGGYSSFVENVTPVGNRDSEGKIRNPKIKIRYDLNKSDTNYLFQSADQVYAINRSSQIVNKNAYYPIWIILNTILFVSVFALYRKKEYK

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Crispr_ID: NZ_LT578453_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT578453_3

948062-948133

Orphan

Consensus_repeat	Method
TTTTTATCTCCACCTGGATTTTTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT578453_3

>merge|NZ_LT578453|3|948062-948133|CRISPRCasFinder
TTTTTATCTCCACCTGGATTTTTGCCTTGATCTGTATTTTCGCCAGGTGTTTTATTTTCCCCAGGATTTTTA

>NZ_LT578453|3|3|948062-948133|CRISPRCasFinder
TTTTTATCTCCACCTGGATTTTTG	CCTTGATCTGTATTTTCGCCAGGT
GTTTTATTTTCCCCAGGATTTTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT578453.1\|WP_101456752.1\|962403_962679_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_013955061.1\|931435_932443_+\|ECF-transporter-S-component	unknown	unknown	gnl\|CDD\|181988
NZ_LT578453.1\|WP_157823759.1\|951060_951459_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_101456729.1\|932988_933414_+\|variable-surface-lipoprotein	unknown	unknown	gnl\|CDD\|185628
NZ_LT578453.1\|WP_013455927.1\|940369_941386_-\|IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT578453.1\|WP_101456730.1\|935064_935478_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_013955063.1\|954956_956801_+\|ribonuclease-J	unknown	unknown	gnl\|CDD\|223668
NZ_LT578453.1\|WP_157823756.1\|939431_940040_+\|variable-surface-lipoprotein	unknown	unknown	gnl\|CDD\|236090
NZ_LT578453.1\|WP_101456732.1\|935639_936095_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236090
NZ_LT578453.1\|WP_014829995.1\|943398_944259_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	unknown	unknown	gnl\|CDD\|378065
NZ_LT578453.1\|WP_101456648.1\|960793_962227_-\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_LT578453.1\|WP_101456648.1\|946165_947599_+\|transposase	unknown	unknown	gnl\|CDD\|376573
NZ_LT578453.1\|WP_013456444.1\|958277_960695_+\|DUF2779-domain-containing-protein	unknown	unknown	gnl\|CDD\|371365
NZ_LT578453.1\|WP_013456322.1\|944251_944866_-\|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein	unknown	unknown	gnl\|CDD\|379128
NZ_LT578453.1\|WP_013955064.1\|956936_958088_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274602
NZ_LT578453.1\|WP_101456731.1\|935446_935695_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT578453.1\|WP_080551570.1\|953647_954676_+\|IS30-like-element-ISMbov1-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_LT578453.1\|WP_013456338.1\|962976_964398_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	unknown	unknown	gnl\|CDD\|235489
NZ_LT578453.1\|WP_013456123.1\|952274_953024_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|334163
NZ_LT578453.1\|WP_099620147.1\|948970_950062_+\|variable-surface-lipoprotein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_LT578453.1\|WP_013955061.1\|931435_932443_+\|ECF-transporter-S-component	gnl\|CDD\|181988	PRK09609, PRK09609, hypothetical protein; Provisional.	2.18188e-93
NZ_LT578453.1\|WP_101456729.1\|932988_933414_+\|variable-surface-lipoprotein	gnl\|CDD\|185628	PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional.	0.000297177
NZ_LT578453.1\|WP_013455927.1\|940369_941386_-\|IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	1.28197e-69
NZ_LT578453.1\|WP_013955064.1\|956936_958088_+\|hypothetical-protein	gnl\|CDD\|274602	TIGR03490, Uncharacterized_lipoprotein_lpp, mycoides cluster lipoprotein, LppA/P72 family. Members of this protein family occur in Mycoplasma mycoides, Mycoplasma hyopneumoniae, and related Mycoplasmas in small paralogous families that may also include truncated forms and/or pseudogenes. Members are predicted lipoproteins with a conserved signal peptidase II processing and lipid attachment site. Note that the name for certain characterized members, p72, reflects an anomalous apparent molecular weight, given a theoretical MW of about 61 kDa.	8.75484e-13
NZ_LT578453.1\|WP_013955063.1\|954956_956801_+\|ribonuclease-J	gnl\|CDD\|223668	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair].	0
NZ_LT578453.1\|WP_157823756.1\|939431_940040_+\|variable-surface-lipoprotein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	1.83299e-05
NZ_LT578453.1\|WP_101456732.1\|935639_936095_+\|hypothetical-protein	gnl\|CDD\|236090	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated.	0.00286024
NZ_LT578453.1\|WP_014829995.1\|943398_944259_-\|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein	gnl\|CDD\|378065	pfam08843, AbiEii, Nucleotidyl transferase AbiEii toxin, Type IV TA system. This family was recently identified as belonging to the nucleotidyltransferase superfamily. AbiEii is the cognate toxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	9.0578e-39
NZ_LT578453.1\|WP_101456648.1\|960793_962227_-\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.41405e-06
NZ_LT578453.1\|WP_101456648.1\|946165_947599_+\|transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	5.41405e-06
NZ_LT578453.1\|WP_013456444.1\|958277_960695_+\|DUF2779-domain-containing-protein	gnl\|CDD\|371365	pfam11074, DUF2779, Domain of unknown function(DUF2779). This domain is conserved in bacteria. The function is not known.	8.74328e-17
NZ_LT578453.1\|WP_013456322.1\|944251_944866_-\|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein	gnl\|CDD\|379128	pfam13338, AbiEi_4, Transcriptional regulator, AbiEi antitoxin. AbiEi_4 is the cognate antitoxin of the type IV toxin-antitoxin 'innate immunity' bacterial abortive infection (Abi) system that protects bacteria from the spread of a phage infection. The Abi system is activated upon infection with phage to abort the cell thus preventing the spread of phage through viral replication. There are some 20 or more Abis, and they are predominantly plasmid-encoded lactococcal systems. TA, toxin-antitoxin, systems on plasmids function by killing cells that lose the plasmid upon division. AbiE phage resistance systems function as novel Type IV TAs and are widespread in bacteria and archaea. The cognate antitoxin is pfam13338.	3.38436e-09
NZ_LT578453.1\|WP_080551570.1\|953647_954676_+\|IS30-like-element-ISMbov1-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	9.23257e-27
NZ_LT578453.1\|WP_013456338.1\|962976_964398_-\|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB	gnl\|CDD\|235489	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB.	0
NZ_LT578453.1\|WP_013456123.1\|952274_953024_+\|site-specific-integrase	gnl\|CDD\|334163	pfam00589, Phage_integrase, Phage integrase family. Members of this family cleave DNA substrates by a series of staggered cuts, during which the protein becomes covalently linked to the DNA through a catalytic tyrosine residue at the carboxy end of the alignment. The catalytic site residues in CRE recombinase are Arg-173, His-289, Arg-292 and Tyr-324.	1.24985e-18

>NZ_LT578453.1|WP_101456648.1|946165_947599_+|transposase
MAIPVEIRQVERPKNTVVKNYFGKFKVVKRTSKYVNGKAIPKDLAIVGEIVDYKFVPFETPIPVGTRSKKNQEKTDIKDYGNIAIFTKNSNDILEKLLTHFDSSTAYKLYVIAILRCAYPKAVNRDLKFYYETSFMSELFKKIGLSESLLPDFFEKTGRAYSNIHNFMLDRINEFKGRVQIIDGTLKSYNSDEVTFSQWSRKGKVKGSKDFTLLYTCDLYTKEPIYHRPYQGNMLDSTIFEDFLENVPSTGEILVADKGFRTKAITELLEQNKNVKYLLPLKRNTTLIRAEKLDENLAPVKIKDKQLLGSKKQIDGKFFYLFKDLEIAGKESVGNYQKHLKRNTFNIDEFNKNNQFFGVIVFESNVDLSLEDVYTLYDQRWEIEEMFNFYKNILELSKTRVHSEMKVYTTEFINYLSLIIATKVKNNLIRLNLHQNYSFRQIIEYLRSYKVEVINDTEWKKRKVLKYVQGLAELLEI
>NZ_LT578453.1|WP_013456322.1|944251_944866_-|type-IV-toxin-antitoxin-system-AbiEi-family-antitoxin-domain-containing-protein
MEQKNLNSKYYNAIFKLLHKNNGVITYKQLKENNISSIYLTRMITKGVLIRRAKGIYILSDGHYDEYYFLSKNYKSLIFSHYSALYLNNIIDIFPHQIDVTVYSGYNAKGIKKHANVYYCDRNKHSIGLSESKTLFGNKVKVYDFERTICDFVKLRKKTDSEIFSKLISAYIKYENRDWKKLYEYAYELGIHKKISEIFELFYE
>NZ_LT578453.1|WP_014829995.1|943398_944259_-|nucleotidyl-transferase-AbiEii/AbiGii-toxin-family-protein
MNKNKLISLCHKTADQNNANFNVVLIQYFMESILRRISKSNERDNFVFKGGFLLSNIMGLDKRATMDIDLELIKTQKISASKILEKFKSILNADDIDGIRYHILKYTDIRKEHKYSGINISVLCQIENIKQVISIDIASGDVITPKEIVYEYKSIFSNQDFSILAYNIETMLSEKLETIFSFGHLNTRFKDFYDVYVIYTFKKKDIDINRLKDACYNTFKNRNSEFNIQQLLELITNIAFNPLMNERWKKYISQIANQQEIDFKAITNSIIELLELIKVNELTNND
>NZ_LT578453.1|WP_013455927.1|940369_941386_-|IS30-family-transposase
MNYTKNYNHLTYDERAFIEIQIKSGYSIRSIARQLNRSPSTVSRELKRNTAFSGSYQCKIAEQKALNRHSHKYLFKFTSNFEYAEFEKFFLEKFDKRFYGIVATARYIKQTFPNIASPSIRTIFNWIKTRKWKLKPRDRLRIFYKKGGKRTASVVSRLIGDSHYVYPIWARPKYIDLREEYGHWESDLIIGKRSNGYDNVLTLVERQTRMGFAVKIKSKSAFLVISKLKKIIQDHNLIVKSITIDNGIEFERMGLLGKWLNIKIFRAEPYASFQRGTNENWNGMIRRMFHKGFDFNSISQVQLDDVVNQINEMPRKILNWQKPIELFKLANDYGVVLN
>NZ_LT578453.1|WP_157823756.1|939431_940040_+|variable-surface-lipoprotein
MKKSKFLLLGSVASLASIPFVAAKCGETKEEKKLEADKPDQSTPANPDQGTPANPGQGTPANPDQGTPANPGQGTPANPDQGTPANPGQGTPTNPDQGTPANPGQGTPTNPGQGTPANPGQGTPTNPDQGTPTNPDQGTPTNPDQGTPTNPGQGTPTNPGQGTPTNPGQGTPAKPHFSPEEENAEKLIREALMRRSKKQQQN
>NZ_LT578453.1|WP_101456732.1|935639_936095_+|hypothetical-protein
MLRQDKVQQVKSGQGTDAKAGQSPAGKSGQGTDAKAXQSPAGKSGQGTDAXAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDANDIYW
>NZ_LT578453.1|WP_101456731.1|935446_935695_+|hypothetical-protein
MLKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKIRTRYRC
>NZ_LT578453.1|WP_101456730.1|935064_935478_+|hypothetical-protein
MEDDLGTPAKPRQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKAGQSPAGKSGQGTDAKGRTKSSR
>NZ_LT578453.1|WP_101456729.1|932988_933414_+|variable-surface-lipoprotein
MKKSKFLLLGSVASLASIPFVAAKCGETKEEKKPEPDKNPGGDKNPGENKTPGENKTPGENKKPEGEKKPEGEKKPEGEKKPEAEENKTPEEDKEPSDEELSEEFSKEKIEGALTEDEKELIDENIKNGITQDKNHIWGME
>NZ_LT578453.1|WP_013955061.1|931435_932443_+|ECF-transporter-S-component
MNKVLNAIKRKWQDFSFFPKLTIRKISFIGILIAISVVIFVVFASFVPLISIPTYKISFIGLPIKISGLIFGPLVGGIVGLISDIISFSLFPTFYNFYYTIAAIVDGVVAGLVGIIFLRVLNYAFGGQFRDASLDNAIFKQKEKLYRLVLFDPQSPKIAKVKTKIIALGEQRKSANVINQEKKLLNINLFAASLLIVLVMLFIFFVVFYVINETTIQQFSIIPNKIGLYALMTSGYVAMFIFLIVARFKMHPKRFLVIIPIVIFSAIIELINVPLLSLADYSTTGASSESGSIITYMFQHIVFSPIKIWFNMFVIFFTYNVINPLVNKNSSIMYE
>NZ_LT578453.1|WP_099620147.1|948970_950062_+|variable-surface-lipoprotein
MKKSKFLLLGSVASLASIPFVAAKCGETKEEKKPEADKPKLSETLKSITGNDLGKVQVAEQDKSNKEKIEAAIKEAIVTKVPTLKDKELKLNADLSKKSVTVSAKDFEGEVTLKFEIEAKSAAKPKLSETLKSITGNDLGKVQVAEQDKSNKEKIEAAIKEAIVAKVPTLKDKELKLNADLSKKSVTVSAKDFEGEVTLKFEIEAKSVAKPKLSETLKSITGNDLGKVQVAEQDKSNKEKIEAAIKEAIVAKVPTLKDKELKLNADLSKKSVTVSAKDFEGEVTLKFEIEAKSDEDKIKKEKIEKEKAVAERNKLNDSITVREELLPGNKGTIWTIYNSKGENYLPISGFKFGEEAKETKANK
>NZ_LT578453.1|WP_157823759.1|951060_951459_-|hypothetical-protein
MNPGNNMTPGSNSENGNNQNTPIKKSLPAIISNSNQQLGKIKNKDKQSILEALLAKNRSLNLDKSQLDVENIKDASAIVFAKGDSTKYEGKILVSFTINSPSSKNPGATTPGGSGSSSSKNPGAATPGGSGA
>NZ_LT578453.1|WP_013456123.1|952274_953024_+|site-specific-integrase
MIDPFIEFCDRKNLARSTVAAYKNILANILSVEKNKHLAIMKIITDQKLKANTQRLYRQVYALYLKFSNQKKNYKDISILKVKPMQSVYRPILTKAQIYRRTNIMLNDKPKIIFYKLLIRFMFETGIRIGELKTISEEDKRIYVIGKGNKNRQIFYNAETYENLKLFKNRIKTVSYITVSKAIKDLLGNEYSPHSLRRSFASFMLKKGALPKMVQRQMGHSSIATTFTYQQLDENENYRIYKKIMLNSK
>NZ_LT578453.1|WP_080551570.1|953647_954676_+|IS30-like-element-ISMbov1-family-transposase
MKTVSNIVGFKSRSIYNLFDRITIETKRGYAKYQKKCKLCGMDLKGKTIYVISALKFLNLIETRHDSKRLENNSKLLMKYIEIFKFYKQLLYFYLKNRNSFNLDSKAVKQSVASIIFKYIRELEAQGKLQNSYIPSVQNFYRILAKHSAFGLKLDILPYKSNGKYGSRTTVKHETKKKTIGKLITERPESVNLRLNDNDYEMDTVIGLRSDNYCILTLINRKSRMFYCTLSRRNAKAIKENLEKLIKDNNLVIDTLTIDNGSENYKLPEIESIKEIFHCHPYSSSEKGSIENAHRLLRRYIPKGKSIDKYVGQDLKPIADFINSHPRIYKGVSGFKCAKQMQ
>NZ_LT578453.1|WP_013955063.1|954956_956801_+|ribonuclease-J
MTPTRIIPIGGVQEIGKSTLIIEHDKHIVIIDAGIKFADTATTGIKGIIPDYKYLKERKDNIEGLFITHGHEDHIGGVVYLVKQVHLKRIYAPKIAIQYLKLKFDEHKITHKVEFIEIEKSAVHEFGNGKIKVDFWTAQHSIPDAFGIRVTTPNGSVMCTGDFRFDYNPIGEIYTDFTKLDAIGKEGLTVLLSDSTNAMRPSHSPSENDILIGIERHMRSATRKIIVTAFASNLTRVKAIIDLAVKLKKKVACFGRSMVQGIKIGRKLGNIKAPSSIFVEKRDIAKVPENQLVVLTTGSQGEQLAALSRMSYGKHANIKVEKGDMVIFSSNPIPGNRMVVELLINRLSKLGAIIKENGPDGYLHTSGHAYKHEHDKIFQLTRPKFFIPYHGEYRMCVAHGESAIRNGVDKKNVFIPEIGQVFNMVDNQIIPTNEKIEYGPIYIDGTTTLSISGSTIKERSELSNSGFVNIIMTIDKEKNEIVGRPHLISRGSFYVKTSLALVEEAKRIAHGAVLYRIKNNANWNIVELKQLIIDRLEALFYKEKRRRPIIIPTFLFVKEENDPLFDKVTIKFENKNIDSKKREANQKVLKELQEEIFGSSIEFSEDFRDEVDDE
>NZ_LT578453.1|WP_013955064.1|956936_958088_+|hypothetical-protein
MIKRVTKLLSSQLVILPMVLPLLSSKCDKQTNNNDSNSSEITDTSSNYFDERANLASPATLPREILGLYPSLIGSTILNNLKLEANRKQNPNSDYATNADNSGFGLLFKKEKNLFIDEMPSLHKELEKIFFNFNPKYTSKYEAKIVAAGFNDLEGELTLGIQILYRPDTAIENTNNNTYFQSFKFTGFRKFDLTNSDNNVLKLKFDNQNLANIFKKWRKHMIHYARHTLKKAMTENTSLASINNPNKLRFVRYLFTPHFLLSEIPLNIKDDTNIYNIKDNNLTLFDVFSRDHKAIVYPFYGSLTSFDDIFDIPNNDSVKFDIYKNSENKEILKITINLTIVPGVQNIYTNIERSTKDKKKVTFSFQVEAPFDELLPDNNPVDN
>NZ_LT578453.1|WP_013456444.1|958277_960695_+|DUF2779-domain-containing-protein
MAEQNKPKIINESKFVKSYFNQDYFLWHTAQEFENKYIAEMMEQNVNDDFSIDDEYDESDIGHSIWTRLINENLDTSIQTVNAQSSIFSNIQNQLNLWATGQLFKGLRYKIVSDKGDIKSKINETNKFLNDPTCDVIINGYFGYETDEFVIYSNPFAFNKINKGLYLVKLSTHVKIDSLLSLKFSYEILKKQNINLDNAYVIIVDSQMPQTKGICKFICTELCHMSKNKYAIEKESWNTINQTLRHTNNPYFLDRKPFVNYINQGWALVKNELPFNDLNSKLPTTFNYIKCLKNNYGLKSIKNADKRNSFFKFDVDNPFDPDLYLGNFDLIINRIINAYKVNKPDLSFFDKNIDDNTALNMDYNNFGKNDLLTKNYLLASLGKNNLFNRQIFTDLKLNLIVNNNADKSFNNAKNSFIEKVEQVYKTGDFIKSLVIEKYLSELHIKDQKIVWYDYESFMSLLPVIDDFSPYSQIVNQVSIIDTINGQIIPSTQADIVYDPKNISIFDLISILKNLYDRQGDKYVVYNKSFENTRNMEIASWAQSHSSDEIFAEELYNKLAIKPDDVMNFANYINNRTIDLYELFSRPSKKMNFDDGKIYQNIHIAVDETKLNSKVISKHSPSVKFSQKDYIIEPKIDKKSFTFTINDVDNQLPDELTNLTYSQESGMASILNLNIFLKDLKGMGSIKKVEHLITSKKISLEHMITPYPDLKKVHNGSEAMEIAIKRYANLIDGYIWEDNLSNLKKYCHNDVLAMIMTFNFVEKMVSDIFPELNSLKYTFDSDHQYLLNRYKWKIDVINYKEKATVN
>NZ_LT578453.1|WP_101456648.1|960793_962227_-|transposase
MAIPVEIRQVERPKNTVVKNYFGKFKVVKRTSKYVNGKAIPKDLAIVGEIVDYKFVPFETPIPVGTRSKKNQEKTDIKDYGNIAIFTKNSNDILEKLLTHFDSSTAYKLYVIAILRCAYPKAVNRDLKFYYETSFMSELFKKIGLSESLLPDFFEKTGRAYSNIHNFMLDRINEFKGRVQIIDGTLKSYNSDEVTFSQWSRKGKVKGSKDFTLLYTCDLYTKEPIYHRPYQGNMLDSTIFEDFLENVPSTGEILVADKGFRTKAITELLEQNKNVKYLLPLKRNTTLIRAEKLDENLAPVKIKDKQLLGSKKQIDGKFFYLFKDLEIAGKESVGNYQKHLKRNTFNIDEFNKNNQFFGVIVFESNVDLSLEDVYTLYDQRWEIEEMFNFYKNILELSKTRVHSEMKVYTTEFINYLSLIIATKVKNNLIRLNLHQNYSFRQIIEYLRSYKVEVINDTEWKKRKVLKYVQGLAELLEI
>NZ_LT578453.1|WP_101456752.1|962403_962679_-|hypothetical-protein
MKEENKTKNKSLSSSTTESTKIAEASKTEAPKPKLAVRDSSNDSIFETWYTGSITKEKATLKKSKTEETPEAKIFDRLYPSLRIKYKSYTP
>NZ_LT578453.1|WP_013456338.1|962976_964398_-|Asp-tRNA(Asn)/Glu-tRNA(Gln)-amidotransferase-subunit-GatB
MNNFETIIGIEIHLELNTKTKMFSPSKIDFEADANTTVNQIDLGYPGTLPLLNKEAVISGVKLAKALSMTIDNELHFDRKNYFYPDLPKGYQITQFYRPIGSNGHFVINTESGSKKINIERIHLEEDTARQYHGEKTKLDYNRAGVPLIEIVSYPEISSADEAVAYVDMIRRIALSLGISSAKMEQGSLRADVNISLRPKGYKGFGTKVEIKNMNSFRAIRNAIDYEIKLQTQKILTNEPILQQTKRYDEESMSTVVMRTKTGTIDYKYFPEPNIPFIKLSDEFINNVKLNELPWEKEERYKNEGIQDIYIKSLINDIELANYFDSINYFDRSKLSKLFFAEVVSLANSKNVKAYKLGIKPQALESAIGLLDDEVISGKSFKKLVPLLINYDGDLNKLIKENNLEQISDEQTITKWIDDVIERNETLVAEYTERSEKVIKFVLGNVMKLSGGKVNPQKANDLLMKLLNKKFKQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LT578453_3	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	NZ_LT578453.1	947948-947971	0	1.0
NZ_LT578453_3	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	NZ_LT578453.1	936356-936379	1	0.958
NZ_LT578453_3	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	NZ_LT578453.1	950721-950744	1	0.958

1. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to position: 947948-947971, mismatch: 0, identity: 1.0

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcgccaggt	Protospacer
************************

2. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to position: 936356-936379, mismatch: 1, identity: 0.958

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcaccaggt	Protospacer
*****************.******

3. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to position: 950721-950744, mismatch: 1, identity: 0.958

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcaccaggt	Protospacer
*****************.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

48095 : 110326

Faecalibacterium_phage(21.43%)

tRNA,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078086171.1\|48095_49124_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.0e-21	33.0
WP_101456644.1\|49326_50091_+	hypothetical protein	NA	NA	NA	NA
WP_013954530.1\|50083_51064_+	aspartate--ammonia ligase	A0A1C9C5F0	Heterosigma_akashiwo_virus	8.1e-53	40.6
WP_013954531.1\|51188_55565_+	PolC-type DNA polymerase III	A0A0K2SUJ2	Clostridium_phage	6.2e-12	31.8
WP_013954532.1\|55970_57194_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.5e-61	35.1
WP_013456569.1\|57183_58149_+\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2H4UW22	Bodo_saltans_virus	3.6e-29	40.9
WP_013954533.1\|58138_58798_+	uracil-DNA glycosylase	A0A068EP41	Falconid_herpesvirus	1.6e-28	36.4
WP_013954534.1\|58799_60986_+\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_013954535.1\|60995_62261_+	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.6e-98	51.1
WP_013954536.1\|62270_63242_+	prolyl aminopeptidase	NA	NA	NA	NA
WP_013954537.1\|63234_64395_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA
WP_013954538.1\|64420_64813_+	iron-sulfur cluster assembly scaffold protein	NA	NA	NA	NA
WP_013954539.1\|64802_66050_+	DNA polymerase IV	NA	NA	NA	NA
WP_013954540.1\|66055_67150_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA
WP_172792935.1\|67164_67905_+	pseudouridine synthase	NA	NA	NA	NA
WP_013954542.1\|67886_69080_+	hypothetical protein	NA	NA	NA	NA
WP_013954543.1\|69116_69377_+	hypothetical protein	NA	NA	NA	NA
WP_013954544.1\|69379_70255_+	class II fructose-1,6-bisphosphate aldolase	NA	NA	NA	NA
WP_101456645.1\|70335_70908_+	thermonuclease family protein	NA	NA	NA	NA
WP_013954995.1\|70919_72164_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_013456528.1\|72367_72838_+	50S ribosomal protein L11	NA	NA	NA	NA
WP_013954546.1\|72837_73533_+	50S ribosomal protein L1	NA	NA	NA	NA
WP_014829861.1\|73579_74038_-	hypothetical protein	NA	NA	NA	NA
WP_075271140.1\|74024_75392_-	hypothetical protein	NA	NA	NA	NA
WP_013954549.1\|75382_76141_-	hypothetical protein	NA	NA	NA	NA
WP_013954550.1\|76361_76895_+\|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	NA	NA	NA	NA
WP_013954551.1\|76879_77611_+	RNA methyltransferase	NA	NA	NA	NA
WP_014829862.1\|77618_77852_+	hypothetical protein	NA	NA	NA	NA
WP_013954553.1\|77851_78712_+	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_013954554.1\|78739_79129_+	hypothetical protein	NA	NA	NA	NA
WP_013954555.1\|79266_80229_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_013954556.1\|80221_81205_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA
WP_013954557.1\|81206_82130_+	FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	1.5e-61	41.2
WP_075271137.1\|82234_82924_-	hypothetical protein	NA	NA	NA	NA
WP_013455974.1\|83143_84235_+	pyruvate dehydrogenase E1 subunit alpha	NA	NA	NA	NA
WP_013954559.1\|84271_85258_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_013456556.1\|85394_85619_+	hypothetical protein	NA	NA	NA	NA
WP_013954560.1\|85618_86353_+	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_013455917.1\|86354_87968_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	7.8e-37	28.3
WP_078086165.1\|88237_89266_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_004024280.1\|89684_89891_+	50S ribosomal protein L28	NA	NA	NA	NA
WP_013456035.1\|89945_90491_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_013455945.1\|90507_91416_-	hypothetical protein	NA	NA	NA	NA
WP_101456646.1\|91926_94812_+	hypothetical protein	NA	NA	NA	NA
WP_013455934.1\|94843_95965_+	ABC transporter permease	NA	NA	NA	NA
WP_013456209.1\|95964_97233_+	ABC transporter permease	NA	NA	NA	NA
WP_013456492.1\|97247_98396_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	4.1e-08	25.0
WP_013456036.1\|98385_100788_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	2.2e-11	38.6
WP_101456647.1\|100800_101784_+	hypothetical protein	NA	NA	NA	NA
WP_013456113.1\|101854_102346_+	membrane protein	NA	NA	NA	NA
WP_013456012.1\|102432_103650_+	YitT family protein	NA	NA	NA	NA
WP_075270997.1\|103687_105628_+	hypothetical protein	NA	NA	NA	NA
WP_101456648.1\|105917_107351_+\|transposase	transposase	NA	NA	NA	NA
WP_078086164.1\|107474_109076_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_078086163.1\|109297_110326_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3

DBSCAN-SWA_2

116836 : 199701

Mycoplasma_phage(22.22%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456141.1\|116836_118273_+\|tRNA	proline--tRNA ligase	A0A1V0SJ28	Klosneuvirus	1.1e-93	37.9
WP_013456293.1\|118332_118701_+	hypothetical protein	NA	NA	NA	NA
WP_075271211.1\|118816_120634_+	hypothetical protein	NA	NA	NA	NA
WP_013456555.1\|120729_121428_+	LemA family protein	NA	NA	NA	NA
WP_101456649.1\|121610_123998_+	phosphoketolase family protein	NA	NA	NA	NA
WP_101456650.1\|124056_125898_-	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	2.1e-17	19.1
WP_013456016.1\|126160_127573_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	1.2e-81	68.7
WP_013456380.1\|127556_128393_+	ABC transporter permease	Q6GZ02	Mycoplasma_phage	2.5e-87	62.0
WP_013456215.1\|128385_129279_+	spermidine/putrescine ABC transporter permease	Q6GZ01	Mycoplasma_phage	2.1e-92	62.3
WP_013455994.1\|129265_131167_+	membrane protein	Q6GZ00	Mycoplasma_phage	3.9e-80	34.2
WP_013456051.1\|131391_131592_+	50S ribosomal protein L32	NA	NA	NA	NA
WP_075271213.1\|131655_133284_+	hypothetical protein	NA	NA	NA	NA
WP_075271214.1\|133285_134422_+\|tRNA	tRNA 4-thiouridine(8) synthase ThiI	NA	NA	NA	NA
WP_013455960.1\|134465_134744_-	hypothetical protein	NA	NA	NA	NA
WP_173022448.1\|134785_136147_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_075271215.1\|136500_137967_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_075271216.1\|138597_141033_+	hypothetical protein	NA	NA	NA	NA
WP_075271217.1\|141184_143674_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	5.8e-140	39.9
WP_075271218.1\|143676_144537_+	bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase	A0A249XZQ2	Enterococcus_phage	1.3e-33	37.6
WP_013954592.1\|144636_145593_+	phosphate acetyltransferase	NA	NA	NA	NA
WP_013954593.1\|145596_146790_+	acetate/propionate family kinase	NA	NA	NA	NA
WP_101456651.1\|146805_147228_+	pantetheine-phosphate adenylyltransferase	NA	NA	NA	NA
WP_101456652.1\|147227_147809_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_101456653.1\|147836_149333_+	hypothetical protein	NA	NA	NA	NA
WP_101456654.1\|149469_150906_+	pyruvate kinase	NA	NA	NA	NA
WP_101456655.1\|150974_151955_-	hypothetical protein	NA	NA	NA	NA
WP_101456656.1\|152205_153999_+	molecular chaperone DnaK	A0A0G2YAL1	Acanthamoeba_polyphaga_mimivirus	2.5e-129	45.8
WP_162293106.1\|154192_155794_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_101456658.1\|156099_157383_-\|tRNA	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	NA	NA	NA	NA
WP_013954601.1\|157541_157925_+	membrane protein	NA	NA	NA	NA
WP_013954602.1\|158062_159052_-	lactate dehydrogenase	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	1.8e-39	32.9
WP_075271077.1\|159461_160262_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_013954605.1\|160377_160539_+	hypothetical protein	NA	NA	NA	NA
WP_013954606.1\|160715_161168_+	hypothetical protein	NA	NA	NA	NA
WP_013954607.1\|161335_163759_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_101456659.1\|163745_165476_-	site-specific DNA-methyltransferase	Q1MVP0	Enterobacteria_phage	5.6e-41	30.3
WP_013954609.1\|167267_168392_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	3.8e-22	28.6
WP_075271984.1\|168520_168910_-	hypothetical protein	NA	NA	NA	NA
WP_013954611.1\|169037_170543_-	trigger factor	NA	NA	NA	NA
WP_013954612.1\|170909_171068_+	hypothetical protein	NA	NA	NA	NA
WP_013954613.1\|171196_172606_-	hypothetical protein	NA	NA	NA	NA
WP_078086166.1\|173683_174712_-\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	3.8e-21	33.8
WP_080551570.1\|175905_176934_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013954618.1\|180567_180954_-	hypothetical protein	NA	NA	NA	NA
WP_101456648.1\|181068_182502_-\|transposase	transposase	NA	NA	NA	NA
WP_013954619.1\|182822_183740_-	5'-3' exonuclease	A0A0N7ACJ6	Bacillus_phage	1.3e-31	31.1
WP_013954620.1\|183741_186675_-	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	1.0e-87	34.4
WP_013954621.1\|187183_188608_-	hypothetical protein	NA	NA	NA	NA
WP_172792932.1\|189242_190622_-	hypothetical protein	NA	NA	NA	NA
WP_172792933.1\|190567_192904_-	S8 family serine peptidase	NA	NA	NA	NA
WP_078086163.1\|195556_196585_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013954995.1\|198456_199701_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0

DBSCAN-SWA_3

222915 : 287729

Faecalibacterium_phage(11.76%)

tRNA,transposase,integrase

attL 248219:248236|attR 282997:283014

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080551570.1\|222915_223944_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456076.1\|224482_224812_+	hypothetical protein	NA	NA	NA	NA
WP_101456663.1\|225055_225751_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_014829885.1\|225734_226721_-	ribose-phosphate pyrophosphokinase	A0A2K9L2G2	Tupanvirus	2.2e-42	35.7
WP_173674352.1\|226939_228016_-	hypothetical protein	NA	NA	NA	NA
WP_013455927.1\|228509_229526_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_101456744.1\|229689_230457_-	hypothetical protein	NA	NA	NA	NA
WP_101456664.1\|231141_232086_-	endonuclease	NA	NA	NA	NA
WP_101456665.1\|232184_234131_+	transketolase	NA	NA	NA	NA
WP_101456666.1\|234193_234748_-	inorganic diphosphatase	A0A1B1ISK6	uncultured_Mediterranean_phage	1.6e-21	39.1
WP_013456603.1\|234826_235096_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_101456667.1\|235209_235797_-	hypothetical protein	NA	NA	NA	NA
WP_101456668.1\|235890_238068_+	hypothetical protein	NA	NA	NA	NA
WP_101456669.1\|238079_239465_+	hypothetical protein	NA	NA	NA	NA
WP_101456745.1\|239464_239800_+	HIT family protein	NA	NA	NA	NA
WP_101456670.1\|239918_240617_+	hypothetical protein	NA	NA	NA	NA
WP_004024364.1\|240670_240823_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_101456746.1\|241262_242291_+\|transposase	IS30 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.5e-20	33.3
WP_173674353.1\|242492_242651_+	hypothetical protein	NA	NA	NA	NA
WP_013456491.1\|242824_243310_+	thiol peroxidase	NA	NA	NA	NA
WP_013456378.1\|243347_243584_-	hypothetical protein	NA	NA	NA	NA
WP_101456671.1\|243573_244638_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA
WP_075270987.1\|244706_244991_-	hypothetical protein	NA	NA	NA	NA
WP_075270988.1\|245012_246563_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	2.1e-79	35.1
WP_075270989.1\|246565_247351_-\|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	NA	NA	NA	NA
WP_101456672.1\|247371_249561_-	ribonuclease R	Q0GXV6	Lactococcus_phage	1.3e-71	33.3
248219:248236	attL	NA	NA	NA	NA
WP_101456673.1\|249563_249806_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_013456283.1\|250148_250736_+	guanylate kinase	A0A0M5KCK5	Mollivirus	1.2e-08	38.6
WP_013456579.1\|250741_251494_+	serine/threonine-protein phosphatase	NA	NA	NA	NA
WP_013456514.1\|251511_252510_+	serine/threonine protein kinase	Q85453	Moloney_murine_sarcoma_virus	4.3e-17	32.2
WP_013456585.1\|252521_253367_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA
WP_013455939.1\|253353_254016_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_013456032.1\|254878_257104_-	AAA family ATPase	A0A2K9V9X6	Bandra_megavirus	3.4e-30	26.6
WP_013456112.1\|257249_258683_-\|transposase	transposase	NA	NA	NA	NA
WP_013954662.1\|259155_260199_+	AAA family ATPase	A0A2H4UTU5	Bodo_saltans_virus	9.9e-09	29.0
WP_013954663.1\|260200_262471_+	S8 family peptidase	NA	NA	NA	NA
WP_013954664.1\|262700_265841_+	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	2.3e-24	24.8
WP_013954665.1\|265842_267483_+	SAM-dependent DNA methyltransferase	NA	NA	NA	NA
WP_075278710.1\|268838_269369_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_013954667.1\|269365_270058_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_013954669.1\|270138_271107_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	3.8e-31	29.2
WP_081375157.1\|271332_271815_+	hypothetical protein	NA	NA	NA	NA
WP_013954672.1\|272109_273267_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_101456674.1\|274212_275832_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	7.7e-109	39.8
WP_075271157.1\|276071_278750_+\|tRNA	isoleucine--tRNA ligase	A0A2I2L3Y0	Orpheovirus	4.3e-80	27.3
WP_075271156.1\|278751_279462_+	signal peptidase II	NA	NA	NA	NA
WP_101456675.1\|279656_281516_+	hypothetical protein	NA	NA	NA	NA
WP_101456676.1\|282466_283063_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA
282997:283014	attR	NA	NA	NA	NA
WP_075271197.1\|283043_284006_+	Holliday junction branch migration DNA helicase RuvB	B3GAM6	uncultured_virus	1.9e-06	26.5
WP_101456677.1\|284042_286409_+	hypothetical protein	NA	NA	NA	NA
WP_101456678.1\|286484_287729_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.8e-09	27.0

DBSCAN-SWA_4

327415 : 399037

Tupanvirus(20.0%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_078086168.1\|327415_329017_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954704.1\|329402_330767_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_162293107.1\|331221_332823_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_013954705.1\|332952_333738_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA
WP_013954706.1\|333742_335272_-	RNA polymerase sigma factor	G8CLC7	Synechococcus_phage	2.0e-29	33.7
WP_101456689.1\|335264_337205_-	DNA primase	A0A1S5RFD7	Helicobacter_phage	5.7e-42	35.3
WP_013954708.1\|337246_338623_-\|tRNA	glycine--tRNA ligase	A0A2I2L3K8	Orpheovirus	3.9e-53	32.0
WP_013954709.1\|338734_340522_-	membrane protein	NA	NA	NA	NA
WP_013954710.1\|340972_342328_+	alkylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_013456298.1\|342330_343263_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	1.3e-07	30.0
WP_013456124.1\|343226_344978_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_013456114.1\|345084_345330_-	DUF2188 domain-containing protein	NA	NA	NA	NA
WP_013456030.1\|345410_347924_-	preprotein translocase subunit SecA	NA	NA	NA	NA
WP_038582866.1\|348166_349213_+	zinc-dependent alcohol dehydrogenase family protein	A0A0K0KVL7	Prochlorococcus_phage	1.0e-13	26.9
WP_075271040.1\|349361_351212_-	type I DNA topoisomerase	A0A2P1ELA0	Moumouvirus	3.7e-75	32.2
WP_013456432.1\|351579_352017_+	30S ribosomal protein S6	NA	NA	NA	NA
WP_013456362.1\|352058_352457_+	single-stranded DNA-binding protein	A0A0H3U4B5	Staphylococcus_phage	9.3e-08	30.3
WP_013456088.1\|352476_352803_+	30S ribosomal protein S18	NA	NA	NA	NA
WP_013954713.1\|352937_354266_-	hypothetical protein	NA	NA	NA	NA
WP_078086163.1\|354504_355533_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456295.1\|355876_356332_-	Sua5/YciO/YrdC/YwlC family protein	NA	NA	NA	NA
WP_013954715.1\|356382_358053_-	APC family permease	NA	NA	NA	NA
WP_013954716.1\|358291_359608_+\|tRNA	histidine--tRNA ligase	A0A2K9L0H9	Tupanvirus	2.7e-11	25.1
WP_013456122.1\|359676_361380_+\|tRNA	aspartate--tRNA ligase	A0A2K9KZX5	Tupanvirus	2.0e-14	23.1
WP_013954691.1\|361463_362708_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_013456084.1\|362805_363597_-	aquaporin family protein	M1HQW3	Paramecium_bursaria_Chlorella_virus	7.3e-12	27.5
WP_013954718.1\|363605_365114_-	glycerol kinase GlpK	NA	NA	NA	NA
WP_013456345.1\|365403_366795_-	hypothetical protein	NA	NA	NA	NA
WP_041309259.1\|366927_367914_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_013456401.1\|367930_368899_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA
WP_013456470.1\|369012_369756_-	DNA repair protein RecO	NA	NA	NA	NA
WP_013456409.1\|369935_370220_+	hypothetical protein	NA	NA	NA	NA
WP_013456558.1\|370212_371859_+	DAK2 domain-containing protein	NA	NA	NA	NA
WP_013456463.1\|371865_372870_+	phosphate acyltransferase PlsX	NA	NA	NA	NA
WP_013456004.1\|372862_373537_+	ribonuclease III	M4QMG4	Micromonas_pusilla_virus	1.2e-18	31.9
WP_101456690.1\|373609_376588_+	AAA family ATPase	NA	NA	NA	NA
WP_013954721.1\|376640_377993_-	YitT family protein	NA	NA	NA	NA
WP_013954722.1\|378087_378924_+	HAD family phosphatase	NA	NA	NA	NA
WP_013954723.1\|378910_379642_-	DNA-processing protein DprA	NA	NA	NA	NA
WP_013455919.1\|379999_381433_+\|transposase	transposase	NA	NA	NA	NA
WP_038582875.1\|381525_382566_+	zinc-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	5.2e-34	29.7
WP_101456691.1\|382875_383865_+	variable surface lipoprotein	NA	NA	NA	NA
WP_013954726.1\|384129_386931_-	C1 family peptidase	NA	NA	NA	NA
WP_013954727.1\|387159_394191_+	hypothetical protein	NA	NA	NA	NA
WP_013954730.1\|394903_395104_-	hypothetical protein	NA	NA	NA	NA
WP_014829909.1\|395223_395955_-	hypothetical protein	NA	NA	NA	NA
WP_038582704.1\|396761_397670_+	variable surface lipoprotein	NA	NA	NA	NA
WP_078086171.1\|398008_399037_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	5.0e-21	33.0

DBSCAN-SWA_5

435265 : 498367

Enterobacteria_phage(18.18%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_101456678.1\|435265_436510_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.8e-09	27.0
WP_013954783.1\|436676_437909_+	UPF0236 family protein	NA	NA	NA	NA
WP_013455927.1\|438260_439277_+\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_013455996.1\|440239_440731_+	transcription elongation factor GreA	NA	NA	NA	NA
WP_013456577.1\|440720_441272_+	hypoxanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_013456513.1\|441373_441853_-	hypothetical protein	NA	NA	NA	NA
WP_013456428.1\|442055_443159_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_013954784.1\|443199_444009_-	DUF45 domain-containing protein	NA	NA	NA	NA
WP_101456693.1\|443980_444667_-	NERD domain-containing protein	NA	NA	NA	NA
WP_013954786.1\|444682_447514_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.7e-276	52.6
WP_013954787.1\|447515_449525_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA
WP_013954788.1\|449644_450592_+	DNA cytosine methyltransferase	V5URQ5	Oenococcus_phage	2.4e-110	63.3
WP_101456694.1\|450859_451312_-	hypothetical protein	NA	NA	NA	NA
WP_013954789.1\|451323_452883_-	TrkH family potassium uptake protein	NA	NA	NA	NA
WP_075271036.1\|453361_454222_+	hypothetical protein	NA	NA	NA	NA
WP_075271035.1\|454229_454733_-	hypothetical protein	NA	NA	NA	NA
WP_101456695.1\|454778_457784_+	hypothetical protein	NA	NA	NA	NA
WP_013954793.1\|457796_457973_+	hypothetical protein	NA	NA	NA	NA
WP_013954794.1\|458058_458727_+	TrkA family potassium uptake protein	NA	NA	NA	NA
WP_013456303.1\|458934_459363_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA
WP_013954796.1\|459364_460267_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA
WP_013954797.1\|460307_461525_+	hypothetical protein	NA	NA	NA	NA
WP_075271135.1\|461561_462704_+	cell division protein FtsZ	NA	NA	NA	NA
WP_013954995.1\|462764_464009_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_013954799.1\|464108_464486_-	glycine cleavage system protein H	NA	NA	NA	NA
WP_013954800.1\|464764_465448_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_013954801.1\|465457_467404_+	M13 family metallopeptidase	E3T4I7	Cafeteria_roenbergensis_virus	1.3e-70	29.7
WP_013954802.1\|467413_467974_+	single-stranded DNA-binding protein	B8R683	Lactobacillus_phage	1.4e-14	41.0
WP_013456196.1\|468094_468721_+	uracil phosphoribosyltransferase	NA	NA	NA	NA
WP_038582742.1\|468689_469418_+	hypothetical protein	NA	NA	NA	NA
WP_013954804.1\|469438_471778_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	2.6e-110	33.7
WP_172792936.1\|471987_474987_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	6.8e-135	44.0
WP_038582744.1\|475078_475804_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013456007.1\|475992_476499_+	hypothetical protein	NA	NA	NA	NA
WP_013456419.1\|476603_477515_-	hypothetical protein	NA	NA	NA	NA
WP_013456542.1\|477650_478064_-	ATP synthase F1 subunit epsilon	NA	NA	NA	NA
WP_013456276.1\|478079_479543_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA
WP_013456581.1\|479595_480459_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA
WP_013954807.1\|480451_482038_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_013954808.1\|482030_482591_-	ATP synthase F1 subunit delta	NA	NA	NA	NA
WP_013954809.1\|482593_483166_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA
WP_013456149.1\|483170_483398_-	ATP synthase F0 subunit C	NA	NA	NA	NA
WP_013456258.1\|483413_484232_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA
WP_013954811.1\|484869_486543_+	hypothetical protein	NA	NA	NA	NA
WP_013954812.1\|486805_487609_+	variable surface lipoprotein	NA	NA	NA	NA
WP_078086173.1\|488083_489112_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	1.1e-20	32.9
WP_014829937.1\|489363_490065_+	variable surface lipoprotein	NA	NA	NA	NA
WP_014829938.1\|490676_491117_-	hypothetical protein	NA	NA	NA	NA
WP_013954815.1\|491109_492858_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.9e-101	36.9
WP_014829939.1\|492865_493861_-\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_013954817.1\|493977_494733_+	hypothetical protein	NA	NA	NA	NA
WP_075270961.1\|494913_496350_+\|transposase	transposase	NA	NA	NA	NA
WP_014829940.1\|496383_496695_+	hypothetical protein	NA	NA	NA	NA
WP_078086174.1\|496765_498367_-\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_6

734672 : 785459

Staphylococcus_phage(33.33%)

tRNA,transposase,integrase

attL 734652:734711|attR 782762:784413

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
734652:734711	attL	NA	NA	NA	NA
WP_101456648.1\|734672_736106_-\|transposase	transposase	NA	NA	NA	NA
WP_013456127.1\|736446_737157_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_013456038.1\|737193_737472_-	50S ribosomal protein L27	NA	NA	NA	NA
WP_013455997.1\|737478_737778_-	50S ribosomal protein L21	NA	NA	NA	NA
WP_013456093.1\|737970_738237_-	hypothetical protein	NA	NA	NA	NA
WP_013456268.1\|738330_738753_-	MscL family protein	NA	NA	NA	NA
WP_013954941.1\|738940_739966_-	nucleotide exchange factor GrpE	NA	NA	NA	NA
WP_013954942.1\|739949_740957_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA
WP_013954943.1\|741125_741338_-	50S ribosomal protein L31	NA	NA	NA	NA
WP_075270971.1\|741360_741957_-	30S ribosomal protein S4	NA	NA	NA	NA
WP_013954945.1\|742254_743757_-	hypothetical protein	NA	NA	NA	NA
WP_075270972.1\|743795_746555_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	3.1e-110	33.2
WP_101456711.1\|747178_751891_+	DUF4011 domain-containing protein	NA	NA	NA	NA
WP_013954691.1\|751955_753200_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	5.3e-09	27.0
WP_101456749.1\|754731_755151_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_075271129.1\|755274_756576_+	ATP-binding protein	NA	NA	NA	NA
WP_101456750.1\|756952_757975_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_075270949.1\|757989_758910_+\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.6e-79	48.3
WP_013954950.1\|758955_762153_-	type I restriction endonuclease subunit R	NA	NA	NA	NA
WP_101456712.1\|762161_763316_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_013954952.1\|763320_765999_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.0e-91	39.6
WP_013954954.1\|767354_767843_-	hypothetical protein	NA	NA	NA	NA
WP_013954957.1\|768918_769473_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA
WP_075271008.1\|769481_771410_-	peptidase S41	NA	NA	NA	NA
WP_075271007.1\|771436_773479_-	peptidase S41	NA	NA	NA	NA
WP_075271178.1\|773766_775158_+\|tRNA	glutamate--tRNA ligase	A0A222YZ70	Escherichia_phage	6.6e-08	25.2
WP_013456580.1\|775148_775550_+	hypothetical protein	NA	NA	NA	NA
WP_101456713.1\|775812_776961_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	3.4e-103	52.9
WP_013456353.1\|777177_778143_-	YwaF family protein	NA	NA	NA	NA
WP_013456411.1\|778159_779518_-	signal recognition particle protein	D6PHS7	uncultured_phage	8.7e-05	29.0
WP_013456099.1\|779536_780361_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_013456213.1\|780432_780672_-	hypothetical protein	A0A172JI00	Bacillus_phage	4.6e-10	40.9
WP_101456714.1\|780765_782178_-\|transposase	IS1634-like element ISMbov2 family transposase	NA	NA	NA	NA
WP_101456648.1\|782782_784216_-\|transposase	transposase	NA	NA	NA	NA
WP_013455927.1\|784442_785459_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
782762:784413	attR	NA	NA	NA	NA

DBSCAN-SWA_7

804991 : 879445

Enterobacteria_phage(18.75%)

tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456540.1\|804991_806380_+\|transposase	transposase	NA	NA	NA	NA
WP_013954983.1\|806814_808647_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.4e-28	25.3
WP_038582898.1\|808657_810442_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.0e-29	26.3
WP_013954985.1\|810665_812135_-	hypothetical protein	NA	NA	NA	NA
WP_013456163.1\|812393_812639_-	YneF family protein	NA	NA	NA	NA
WP_013954986.1\|812664_813753_-	M42 family peptidase	NA	NA	NA	NA
WP_014829974.1\|813855_815100_+\|transposase	IS3 family transposase	Q6H9S6	Enterobacteria_phage	6.9e-09	26.6
WP_075271052.1\|815144_823142_-	hypothetical protein	NA	NA	NA	NA
WP_013954989.1\|823297_827734_-	DNA-directed RNA polymerase subunit beta'	A0A076FGB9	Aureococcus_anophage	3.2e-48	23.5
WP_013456481.1\|827726_831362_-	DNA-directed RNA polymerase subunit beta	W8W1V4	Invertebrate_iridescent_virus	2.0e-48	26.9
WP_013456028.1\|831813_832458_+	hypothetical protein	NA	NA	NA	NA
WP_004024017.1\|832592_832964_-	50S ribosomal protein L7/L12	NA	NA	NA	NA
WP_172792937.1\|832990_833485_-	50S ribosomal protein L10	NA	NA	NA	NA
WP_013456027.1\|833976_834702_+	leucine-rich repeat domain-containing protein	NA	NA	NA	NA
WP_013456485.1\|834713_836183_-\|tRNA	lysine--tRNA ligase	A0A1V0SIS0	Klosneuvirus	4.0e-80	36.9
WP_013954990.1\|836336_837227_+	hypothetical protein	NA	NA	NA	NA
WP_013954991.1\|837271_839431_+	helix-hairpin-helix domain-containing protein	NA	NA	NA	NA
WP_075271051.1\|839577_841746_+	AAA family ATPase	K4FB40	Cronobacter_phage	1.1e-107	34.4
WP_013954995.1\|842988_844233_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	4.1e-09	27.0
WP_013954997.1\|845395_846493_+	DNA adenine methylase	M1HGA9	Paramecium_bursaria_Chlorella_virus	6.5e-27	31.6
WP_014829976.1\|846474_847416_+	DNA adenine methylase	A0A1W6JN66	Lactococcus_phage	6.5e-52	39.9
WP_013954999.1\|847554_847845_+	30S ribosomal protein S16	NA	NA	NA	NA
WP_013456497.1\|847848_848532_+\|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	NA	NA	NA	NA
WP_013456054.1\|848521_848872_+	50S ribosomal protein L19	NA	NA	NA	NA
WP_013955000.1\|849027_849867_-\|tRNA	methionyl-tRNA formyltransferase	M4QRX9	Synechococcus_phage	9.1e-05	23.7
WP_173022450.1\|850102_852907_+	flippase-like domain-containing protein	NA	NA	NA	NA
WP_013955002.1\|852981_854694_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_013456153.1\|854738_855605_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_013456195.1\|855633_856104_-	hypothetical protein	NA	NA	NA	NA
WP_013455914.1\|856110_856842_-	L-ribulose-5-phosphate 4-epimerase	NA	NA	NA	NA
WP_013456005.1\|856843_857728_-	L-ribulose-5-phosphate 3-epimerase	NA	NA	NA	NA
WP_013456285.1\|857702_858356_-	3-keto-L-gulonate-6-phosphate decarboxylase UlaD	NA	NA	NA	NA
WP_075271031.1\|858365_858854_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_013456143.1\|858853_859138_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_013955003.1\|859236_861045_-	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_013455916.1\|861096_862158_-	phosphotriesterase	NA	NA	NA	NA
WP_013456138.1\|862503_863361_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_162293105.1\|865271_865514_+	hypothetical protein	NA	NA	NA	NA
WP_101456716.1\|865434_865641_-	variable surface lipoprotein	NA	NA	NA	NA
WP_101456717.1\|865774_866758_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_101456718.1\|866877_867084_-	variable surface lipoprotein	NA	NA	NA	NA
WP_101456719.1\|867491_868391_+	Fic family protein	A0A1V0E025	Clostridioides_phage	3.2e-08	25.4
WP_101456720.1\|869790_870312_+	site-specific DNA-methyltransferase	A0A1B0XVP8	Campylobacter_phage	5.8e-26	69.0
WP_101456721.1\|870427_871141_+	site-specific DNA-methyltransferase	I7KLR2	Campylobacter_virus	2.4e-46	58.9
WP_101456678.1\|871399_872644_-\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.8e-09	27.0
WP_013456040.1\|872753_873770_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	3.2e-36	33.6
WP_075271059.1\|873926_875780_-	glycerol ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_075271058.1\|875840_876653_-	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_013955024.1\|876642_877638_-	sugar ABC transporter permease	NA	NA	NA	NA
WP_101456648.1\|878011_879445_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_8

902849 : 1010944

Staphylococcus_phage(18.18%)

tRNA,transposase,protease,integrase

attL 945969:946028|attR 962365:964019

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013456477.1\|902849_903467_-\|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	NA	NA	NA	NA
WP_004024108.1\|903521_903737_-	hypothetical protein	NA	NA	NA	NA
WP_013456259.1\|904025_904637_+	DUF402 domain-containing protein	NA	NA	NA	NA
WP_013455927.1\|904933_905950_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_013456320.1\|906107_907781_-	ribonuclease J	NA	NA	NA	NA
WP_013455948.1\|908826_909552_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	1.4e-30	36.9
WP_013456583.1\|909544_910447_-	DNA polymerase III subunit delta'	NA	NA	NA	NA
WP_013456476.1\|910446_911094_-	dTMP kinase	Q2Z0N0	Pseudomonas_phage	2.2e-22	35.6
WP_013456384.1\|911108_911696_-	recombination protein RecR	NA	NA	NA	NA
WP_013456226.1\|911698_911989_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_078086165.1\|914095_915124_-\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013456011.1\|916437_917934_+	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA	NA	NA	NA
WP_013456010.1\|917936_918836_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_013456212.1\|919024_919777_+	hypothetical protein	NA	NA	NA	NA
WP_013455980.1\|919974_920508_+	hypothetical protein	NA	NA	NA	NA
WP_013456446.1\|920494_921103_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_041309179.1\|921161_922067_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_013955056.1\|922105_922762_-	hypothetical protein	NA	NA	NA	NA
WP_013456231.1\|922906_923419_-	adenine phosphoribosyltransferase	A0A2K9L2N8	Tupanvirus	1.4e-11	34.4
WP_013456169.1\|923447_925253_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	2.8e-27	24.7
WP_013456107.1\|925231_925534_-	YlxR family protein	NA	NA	NA	NA
WP_101456727.1\|925517_927152_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_101456728.1\|927159_927606_-	ribosome assembly cofactor RimP	NA	NA	NA	NA
WP_013456273.1\|927745_928318_-	thymidine kinase	Q6GYZ9	Mycoplasma_phage	9.4e-70	70.1
WP_013456539.1\|928393_929764_-	peptidase M17	Q6GYZ8	Mycoplasma_phage	1.5e-153	73.1
WP_078086180.1\|930196_931225_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013955061.1\|931435_932443_+	ECF transporter S component	NA	NA	NA	NA
WP_101456729.1\|932988_933414_+	variable surface lipoprotein	NA	NA	NA	NA
WP_101456730.1\|935064_935478_+	hypothetical protein	NA	NA	NA	NA
WP_101456731.1\|935446_935695_+	hypothetical protein	NA	NA	NA	NA
WP_101456732.1\|935639_936095_+	hypothetical protein	NA	NA	NA	NA
WP_157823756.1\|939431_940040_+	variable surface lipoprotein	NA	NA	NA	NA
WP_013455927.1\|940369_941386_-\|transposase	IS30 family transposase	W5R8L2	Staphylococcus_phage	8.4e-37	33.6
WP_014829995.1\|943398_944259_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA
WP_013456322.1\|944251_944866_-	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	NA	NA	NA	NA
945969:946028	attL	NA	NA	NA	NA
WP_101456648.1\|946165_947599_+\|transposase	transposase	NA	NA	NA	NA
WP_099620147.1\|948970_950062_+	variable surface lipoprotein	NA	NA	NA	NA
WP_157823759.1\|951060_951459_-	hypothetical protein	NA	NA	NA	NA
WP_013456123.1\|952274_953024_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_080551570.1\|953647_954676_+\|transposase	IS30-like element ISMbov1 family transposase	A0A2K9V2S9	Faecalibacterium_phage	6.5e-21	33.3
WP_013955063.1\|954956_956801_+	ribonuclease J	NA	NA	NA	NA
WP_013955064.1\|956936_958088_+	hypothetical protein	NA	NA	NA	NA
WP_013456444.1\|958277_960695_+	DUF2779 domain-containing protein	NA	NA	NA	NA
WP_101456648.1\|960793_962227_-\|transposase	transposase	NA	NA	NA	NA
WP_101456752.1\|962403_962679_-	hypothetical protein	NA	NA	NA	NA
WP_013456338.1\|962976_964398_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
962365:964019	attR	NA	NA	NA	NA
WP_013456387.1\|964390_965704_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_013456031.1\|965703_966009_-\|tRNA	glutamyl-tRNA(Gln) amidotransferase	NA	NA	NA	NA
WP_013456120.1\|966014_966869_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_013456616.1\|966880_967459_-	segregation/condensation protein B	A0A1B1IVT7	uncultured_Mediterranean_phage	1.2e-11	29.7
WP_101456737.1\|967448_968210_-	segregation/condensation protein A	NA	NA	NA	NA
WP_013456430.1\|968202_968943_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA
WP_013456524.1\|968952_969267_-	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA
WP_013456382.1\|969440_970751_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA
WP_013456261.1\|970753_971419_-	(d)CMP kinase	NA	NA	NA	NA
WP_014829997.1\|971489_971951_-	hypothetical protein	NA	NA	NA	NA
WP_013955073.1\|972238_973372_-	DnaJ domain-containing protein	A0A1V0SBY2	Catovirus	3.0e-27	32.2
WP_013955074.1\|973609_973951_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_075271047.1\|974124_975360_-\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	4.3e-59	33.4
WP_075271046.1\|975370_975973_-\|tRNA	tRNA-binding protein	NA	NA	NA	NA
WP_013456246.1\|976034_976937_+	DegV family protein	NA	NA	NA	NA
WP_014829999.1\|977097_977331_-	acyl carrier protein	NA	NA	NA	NA
WP_013955078.1\|977370_978093_-	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_101456738.1\|978092_979169_-	peptide chain release factor 1	NA	NA	NA	NA
WP_013955080.1\|979294_979867_-	Fic family protein	NA	NA	NA	NA
WP_013955081.1\|979888_981310_-	YitT family protein	NA	NA	NA	NA
WP_013955084.1\|982837_984805_+	type IIA DNA topoisomerase subunit B	G3M9Z3	Bacillus_virus	8.7e-131	41.5
WP_013955085.1\|984927_985242_+	thioredoxin family protein	A0A1X9I9P5	Staphylococcus_phage	1.7e-12	39.0
WP_013955086.1\|985294_985741_+	SsrA-binding protein	W5RAM5	Staphylococcus_phage	1.8e-12	37.4
WP_101456648.1\|986713_988147_-\|transposase	transposase	NA	NA	NA	NA
WP_078086167.1\|988742_990344_+\|transposase	IS1634-like element ISMbov3 family transposase	NA	NA	NA	NA
WP_101456739.1\|990648_991638_-	DUF285 domain-containing protein	NA	NA	NA	NA
WP_038582834.1\|991753_991963_-	variable surface lipoprotein	NA	NA	NA	NA
WP_013456532.1\|992099_993059_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_013955092.1\|993254_993650_+	hypothetical protein	NA	NA	NA	NA
WP_013955093.1\|993827_995072_+\|transposase	IS3 family transposase	Q6H9S3	Enterobacteria_phage	1.1e-09	27.3
WP_013955094.1\|995188_997897_-	magnesium-translocating P-type ATPase	A0A1J0FA34	Only_Syngen_Nebraska_virus	3.7e-47	26.1
WP_075271034.1\|998017_999106_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.2e-14	29.7
WP_101456740.1\|999112_1007236_-	ABC transporter permease	NA	NA	NA	NA
WP_013456547.1\|1007416_1009447_-\|protease	ATP-dependent zinc metalloprotease FtsH	M4QMW8	Micromonas_pusilla_virus	3.8e-105	46.5
WP_075271032.1\|1009517_1010378_-\|tRNA	tRNA lysidine(34) synthetase TilS	R4TVK3	Phaeocystis_globosa_virus	4.5e-15	28.7
WP_013456042.1\|1010377_1010944_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_LT578453.1|WP_013955092.1|993254_993650_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_LT578453.1|WP_013955092.1|993254_993650_+|hypothetical-protein

993254_993650_+

131 aa aa

902849-1010944

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_LT578453_3	Orphan	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	947948-947971	0
NZ_LT578453_3	Orphan	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	936379-936356	1
NZ_LT578453_3	Orphan	3.1\|948086\|24\|NZ_LT578453\|CRISPRCasFinder	948086-948109	24	950721-950744	1

1. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to NZ_LT578453 position: 947948-947971, mismatch: 0

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcgccaggt	Protospacer
************************

2. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to NZ_LT578453 position: 936379-936356, mismatch: 1

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcaccaggt	Protospacer
*****************.******

3. spacer 3.1|948086|24|NZ_LT578453|CRISPRCasFinder matches to NZ_LT578453 position: 950721-950744, mismatch: 1

ccttgatctgtattttcgccaggt	CRISPR spacer
ccttgatctgtattttcaccaggt	Protospacer
*****************.******

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT578453

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information