CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT603683	Bacillus glycinifermentans isolate BGLY chromosome 1	1 crisprs	csa3,WYL,DinG,cas3,DEDDh	0	1	14	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_LT603683_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_LT603683_1

3514140-3514247

Orphan

Consensus_repeat	Method
GCGGGTGATGGGAATCGAACCCACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_LT603683_1

>merge|NZ_LT603683|1|3514140-3514247|CRISPRCasFinder
GCGGGTGATGGGAATCGAACCCACGACATCAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCATCTCGCATGGGGCGGTTGATGGGAATCGAACCCACGA

>NZ_LT603683|1|1|3514140-3514247|CRISPRCasFinder
GCGGGTGATGGGAATCGAACCCACGA	CATCAGCTTGGAAGGCTGAGGTTTTACCACTAAACTACACCCGCATCTCGCATGGG
GCGGTTGATGGGAATCGAACCCACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT603683.1\|WP_046132335.1\|3527564_3527753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_LT603683.1\|WP_046130687.1\|3508341_3510081_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	unknown	unknown	gnl\|CDD\|236020
NZ_LT603683.1\|WP_046132332.1\|3523702_3524806_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380483
NZ_LT603683.1\|WP_046130683.1\|3504065_3505175_-\|o-succinylbenzoate-synthase	unknown	unknown	gnl\|CDD\|239433
NZ_LT603683.1\|WP_046133032.1\|3515973_3516276_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275393
NZ_LT603683.1\|WP_099047118.1\|3512803_3513562_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274340
NZ_LT603683.1\|WP_046130682.1\|3502396_3503710_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274819
NZ_LT603683.1\|WP_046132334.1\|3526410_3527406_-\|processed-acidic-surface-protein	unknown	unknown	gnl\|CDD\|275176
NZ_LT603683.1\|WP_046130686.1\|3507532_3508354_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	unknown	unknown	gnl\|CDD\|274729
NZ_LT603683.1\|WP_046132346.1\|3525771_3526344_-\|class-D-sortase	unknown	unknown	gnl\|CDD\|320677
NZ_LT603683.1\|WP_046130681.1\|3501882_3502380_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_LT603683.1\|WP_046132336.1\|3527986_3529099_+\|RapH-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|376220
NZ_LT603683.1\|WP_046130684.1\|3505187_3506624_-\|o-succinylbenzoate--CoA-ligase	unknown	unknown	gnl\|CDD\|235146
NZ_LT603683.1\|WP_046132337.1\|3529336_3529984_+\|pyroglutamyl-peptidase-I	unknown	unknown	gnl\|CDD\|237299
NZ_LT603683.1\|WP_046132333.1\|3525171_3525756_+\|energy-coupled-thiamine-transporter-ThiT	unknown	unknown	gnl\|CDD\|370542
NZ_LT603683.1\|WP_157759345.1\|3517370_3517562_-\|hypothetical-protein	unknown	unknown	unknown
NZ_LT603683.1\|WP_046130685.1\|3506701_3507520_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	unknown	unknown	gnl\|CDD\|180958
NZ_LT603683.1\|WP_099047070.1\|3530113_3530596_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_LT603683.1\|WP_046130689.1\|3511769_3512705_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl\|CDD\|235695
NZ_LT603683.1\|WP_046130688.1\|3510077_3511502_-\|isochorismate-synthase-MenF	unknown	unknown	gnl\|CDD\|224091

Protein	Function_ID	Function_description	E-value
NZ_LT603683.1\|WP_046130687.1\|3508341_3510081_-\|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase	gnl\|CDD\|236020	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated.	0
NZ_LT603683.1\|WP_046132332.1\|3523702_3524806_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|380483	cd01541, PBP1_AraR, ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for arabinose (AraR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of AraR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type 1 periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type 1 periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.	5.98977e-132
NZ_LT603683.1\|WP_046130683.1\|3504065_3505175_-\|o-succinylbenzoate-synthase	gnl\|CDD\|239433	cd03317, NAAAR, N-acylamino acid racemase (NAAAR), an octameric enzyme that catalyzes the racemization of N-acylamino acids. NAAARs act on a broad range of N-acylamino acids rather than amino acids. Enantiopure amino acids are of industrial interest as chiral building blocks for antibiotics, herbicides, and drugs. NAAAR is a member of the enolase superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	0
NZ_LT603683.1\|WP_046133032.1\|3515973_3516276_-\|hypothetical-protein	gnl\|CDD\|275393	cd10570, PH-GRAM, Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain. Myotubularin-related proteins are a subfamily of protein tyrosine phosphatases (PTPs) that dephosphorylate D3-phosphorylated inositol lipids. Mutations in this family cause the human neuromuscular disorders myotubular myopathy and type 4B Charcot-Marie-Tooth syndrome. 6 of the 13 MTMRs (MTMRs 5, 9-13) contain naturally occurring substitutions of residues required for catalysis by PTP family enzymes. Although these proteins are predicted to be enzymatically inactive, they are thought to function as antagonists of endogenous phosphatase activity or interaction modules. Most MTMRs contain a N-terminal PH-GRAM domain, a Rac-induced recruitment domain (RID) domain, a PTP domain (which may be active or inactive), a SET-interaction domain, and a C-terminal coiled-coil region. In addition some members contain DENN domain N-terminal to the PH-GRAM domain and FYVE, PDZ, and PH domains C-terminal to the coiled-coil region. The GRAM domain, found in myotubularins, glucosyltransferases, and other putative membrane-associated proteins, is part of a larger motif with a pleckstrin homology (PH) domain fold.	4.74703e-05
NZ_LT603683.1\|WP_099047118.1\|3512803_3513562_+\|hypothetical-protein	gnl\|CDD\|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	5.35886e-64
NZ_LT603683.1\|WP_046130682.1\|3502396_3503710_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274819	TIGR03860, FMN_nitrolo, FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family. This model represents a distinctive clade, in which all characterized members are FMN-binding, within the larger family of luciferase-like monooxygenases (LLM), among which there are both FMN- and F420-binding enzymes. A well-characterized member is nitrilotriacetate monooxygenase from Aminobacter aminovorans (Chelatobacter heintzii), where nitrilotriacetate is a chelating agent used in detergents. [Unknown function, Enzymes of unknown specificity].	0
NZ_LT603683.1\|WP_046132336.1\|3527986_3529099_+\|RapH-N-terminal-domain-containing-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	5.66547e-22
NZ_LT603683.1\|WP_046130686.1\|3507532_3508354_-\|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase	gnl\|CDD\|274729	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	3.09878e-124
NZ_LT603683.1\|WP_046132346.1\|3525771_3526344_-\|class-D-sortase	gnl\|CDD\|320677	cd05828, Sortase_D_1, Sortase domain found in subfamily 1 of the class D family of sortases. Class D sortases are cysteine transpeptidases distributed in Gram-positive bacteria (mainly present in Firmicutes). The prototypical subfamily 1 of class D sortase from Bacillus anthracis (named Ba-SrtC) covalently attaches proteins bearing a noncanonical LPNTA sorting signal, such as the BasH and BasI proteins, to the peptidoglycan of the cell wall that facilitate sporulation. BasH is exclusively anchored to the forespore cell wall envelope, while BasI is attached to the diaminopimelic acid moiety of the peptidoglycan of predivisional cells. Ba-SrtC lacks the N-terminal signal peptide and membrane anchor. The family also includes many class D sortase homologs from Gram-negative bacteria, but the functions of these enzymes are unknown.	6.94793e-61
NZ_LT603683.1\|WP_046130681.1\|3501882_3502380_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.20239e-10
NZ_LT603683.1\|WP_046130684.1\|3505187_3506624_-\|o-succinylbenzoate--CoA-ligase	gnl\|CDD\|235146	PRK03640, PRK03640, o-succinylbenzoate--CoA ligase.	0
NZ_LT603683.1\|WP_046132337.1\|3529336_3529984_+\|pyroglutamyl-peptidase-I	gnl\|CDD\|237299	PRK13197, PRK13197, pyrrolidone-carboxylate peptidase; Provisional.	4.99104e-129
NZ_LT603683.1\|WP_046132333.1\|3525171_3525756_+\|energy-coupled-thiamine-transporter-ThiT	gnl\|CDD\|370542	pfam09515, Thia_YuaJ, Thiamine transporter protein (Thia_YuaJ). Members of this protein family have been assigned as thiamine transporters by a phylogenetic analysis of families of genes regulated by the THI element, a broadly conserved RNA secondary structure element through which thiamine pyrophosphate (TPP) levels can regulate transcription of many genes related to thiamine transport, salvage, and de novo biosynthesis. Species with this protein always lack the ThiBPQ ABC transporter. In some species (e.g. Streptococcus mutans and Streptococcus pyogenes), yuaJ is the only THI-regulated gene. Evidence from Bacillus cereus indicates thiamine uptake is coupled to proton translocation.	3.59491e-65
NZ_LT603683.1\|WP_046132334.1\|3526410_3527406_-\|processed-acidic-surface-protein	gnl\|CDD\|275176	TIGR04383, hypothetical_protein_HMPREF1015_01194, processed acidic surface protein. Members of this family are acidic surface proteins with an N-terminal signal peptide and a variant C-terminal sortase recognition sequence, LPXTA rather than LPXTG. The N-terminal region past the signal peptide is repeated a second or third time in many members of this family. Members occur in Firmicutes, encoded next to a dedicated sortase related to SrtC that assembles pilins, suggesting that this protein serves a structural rather than enzymatic role. Processing by the neighboring sortase may result in polymerization as well as surface attachment. [Cell envelope, Surface structures].	1.48972e-111
NZ_LT603683.1\|WP_046130685.1\|3506701_3507520_-\|1,4-dihydroxy-2-naphthoyl-CoA-synthase	gnl\|CDD\|180958	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated.	0
NZ_LT603683.1\|WP_099047070.1\|3530113_3530596_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	8.82032e-14
NZ_LT603683.1\|WP_046130689.1\|3511769_3512705_+\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl\|CDD\|235695	PRK06080, PRK06080, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Validated.	2.26582e-131
NZ_LT603683.1\|WP_046130688.1\|3510077_3511502_-\|isochorismate-synthase-MenF	gnl\|CDD\|224091	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism].	3.21918e-141

>NZ_LT603683.1|WP_099047118.1|3512803_3513562_+|hypothetical-protein
MHVLTKEQLTKLENELKAGKEQIISRFKANGHFGIDVTFPFNSTGDLSSYDNHPGDEGTELYEREKDLALYEHEREHLHDIEHALSLIEKGTYGRCEVCGKEIPYERLSVLPTATTCSEHSSNISVSKDRPIEEEVLTPPYGRFEQDERDENVAYDAEDAYQDVERYGDSDTPQDMEFPPQSYSQTYMEYEERLGNVEDYENFVATDITGKEITVYPTIEHEQYEELLDEEGIMTSFGDLPPAEKEPYTEDD
>NZ_LT603683.1|WP_046130689.1|3511769_3512705_+|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MQHQSLSGSVSGIKPEKSWRVWWMLTRPHTLTAAFVPVTLGTVLALQTGRIDIWLFIAMLVASILIQIGTNLFNEYFDFVRGLDNENSVGIGGAIVRHGMKPKTVLYTAYGLFAVSVLLGVYICMSSSWWLALIGLVCMAVGYLYTGGPLPISYTPFGEIMSGVFMGMIIILISYYIQTGELTWNVFLISLPITILVGGINLSNNIRDLAGDKENGRKTLPILAGRKNAVHILSWAFIISYLLIGLYIVMGIVTVWSAIVLLSLPKPVKAIKEFKAKEKPAELMIAMKSTAQTNTFFGLLLAIGVLIHHFV
>NZ_LT603683.1|WP_046130688.1|3510077_3511502_-|isochorismate-synthase-MenF
MVTTVQRTSLREASEALNIVKKVNHAVLISYSRKIKNIDALSFFKSGEEAFAGKRFFWSDPDGEMTLVGLGRELTISTSGKDAGRYREIDQQWARVKEKAYHFHEGEDLHQAAVGPLLFGGFSFDPLETREQHWEGYPEGAFFVPSAMLTKAGEEAFLTVNKWKSPDEDASKVLAELKAASLHLTNISAFKEDEKAGARIEAKEELHVSEWLDAIRRATNDIKKGAYDKVVLARDILLTFDKPVKLHEVLFKLMSEQKTSYIFAVEENGKSFVGASPERLIKKDGMKVLSTCLAGSIKRGETEQEDRMLGLELLNDEKNLIEHDIVVGMIHQAFLANCSRVKKPAKPGLYKTKNVQHLYTPVVGQMNDQASLFDLIEQLHPTPALGGSPQHKAVEVIRNSEPMSRGWYAAPVGWIDIAGNGEFAVAIRSGLIESNEARLFAGCGIVADSDPLLEYEETQIKFKPMLSAFGGDTL
>NZ_LT603683.1|WP_046130687.1|3508341_3510081_-|2-succinyl-5-enolpyruvyl-6-hydroxy-3--cyclohexene-1-carboxylic-acid-synthase
MTENPITTYIGNFIDELSLAGVTEAVICPGSRSTPLAILAAAHPDINVHVHIDERSAGYFALGIAKAKRGPVALICTSGTAAANFYPAVVEAHYSRIPLIVLTADRPHELREVGAPQAIDQQFLFGNFVKYFTDSALPDAHPDMLAYIRSVASRAAGEASRAPNGPVHINFPLREPLMPNLNADPFQRTERGRHVSVSNAAAAADQKELEAVMALISDTEEGIIVCGELPNDDVKRDILSLAEMTGYPILADPLSNLRNGAHSKKSVIAAYDSLLRDEELKASLMPKLVIRFGPMPVSKPLFQLLKQNPGIWQIVVDPDGGWRDPTQRSSWMMHCSEREFAKAAAASIREKRAGRWLEKWQFADSRFRRHLKNLEAEDLTFEGNVYRNLQHIIPENSSLFVGNSMPIRDADTFFENQDRPFRIFANRGANGIDGVVSTALGVYAATKEPVTLVIGDLSFYHDLNGLLVTKTLDIPLTVVLVNNDGGGIFSFLPQSAEERYFEQLFGTPTGLEFEHAAKLYGGRYACPESSAEFADAYLSSVNRCGLDIIEVKTRRETRVELHRRLLDTVLYEIRKEWPF
>NZ_LT603683.1|WP_046130686.1|3507532_3508354_-|2-succinyl-6-hydroxy-2,-4-cyclohexadiene-1-carboxylate-synthase
MAVLRLTLRDGIGYEIEDNGASAEKTAVFLHGFTGSAKTWDETDEHFRGIRLIKLNLLGHGKTDSPADNQRYTTEQQAADLLEIFDLLKLKKVDLVGYSMGGRLALSFAMTHPERVSGLVLESSSPGLQTEEERRSRRDQDARLGERIINEGIESFVDYWEQIPLFASQLSLEASKRKKIREERLSNNPTGLAGSLTGMGTGSQPSWWDKLGDITFPVLLIAGSLDKKFVAINQNMHRKIPGSRLVIAEQTGHAVHVEEPDFFGKIVSEFIFK
>NZ_LT603683.1|WP_046130685.1|3506701_3507520_-|1,4-dihydroxy-2-naphthoyl-CoA-synthase
MTVEWKSERQYEDILYETYNGIAKITINRPEVHNAFRPKTVTELIDAFAYARDDADIGVIILAGAGDKAFCSGGDQKVRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVVAMVSGYAIGGGHVLHIVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAEEALEMGLVNTVVPLEKLEEETIKWCEEMLEKSPTALRFLKAAFNADTDGLAGIQQFAGDATLLYYTTDEAKEGRDAFKEKRRPDFGQFPRFP
>NZ_LT603683.1|WP_046130684.1|3505187_3506624_-|o-succinylbenzoate--CoA-ligase
MLMDQPNWLKQRAELTPDRLALIQGNQQLTFLELYEEAKKMAAQLKNCSIGKGDTAAVLLTNRTEMVIAVHACFLLGVRLVLLNTKLSKAERMYQIEHSEAKLLITEQPFAEEHSQDLSIRTVQIEDIQAIKAEPLIKEADIHLDDTATIMYTSGTTGRPKGVMQTFANHYFSAVSSALNLGLAENERWLIALPLFHISGLSALFKSVIYGMAVVLHQKFDADDVLRSINDHQVTVISVVQTMLSRLAARVDNCPESLRCLLLGGGPAPYSLLEECKRKRLPVVQSYGMTETCSQVATLAPEYSMTKLGSAGKPLFASGIRIEKNGAPAETGEHGEICVKGPTVMKGYLKNEAANEESFNDGWFRTGDIGYLDDDGFLYVLDRRSDLIISGGENIYPAEVEAVLLSHPAVDEAGVRGADDETWGKVPHAYLVVNEHVEEQELIRFCKERLASYKVPKAFHVVRQLPRNASNKLMRHKL
>NZ_LT603683.1|WP_046130683.1|3504065_3505175_-|o-succinylbenzoate-synthase
MIQIKQLTLYHLSMRLKKPFTSSLETFQERKFIIIEAKDKDGVTGWGEVSAFSSPWYTEETTETCYHMLKDFFIPAVLHESFTHPSDIPEKLRGFKGNRMAKAGLEAAFWDIHAQKNGITLSEALGGIKTEVPAGVVVGLAPLEDMLREIDQYVKEGYQRIKLKIQPGQDIELLKEIRRHFPRVPLMADANSSYDIKDISRIKSLDEFKLMMIEQPLADDDIVDHRHLQKHIKTSICLDESIRSADDARKAIELGSCKIINIKPSRVGGLTEALKIHDLCKQHNMPVWCGGMFETGISRAHNIALSSLPQFVIPGDISSSSRYWEEDIVKPEIRIEDGFIQVPDRPGMGFEVDANTLRKHSFKMDVFRP
>NZ_LT603683.1|WP_046130682.1|3502396_3503710_-|LLM-class-flavin-dependent-oxidoreductase
MKQIKLGVFLAGTGHHVASWRHPSAPEDASMNLDYFKELAKTAERGKLDMLFLADSLSIDSKSHPNVLTRFEPFTLLSALAQVTSKIGLAATASTTYSEPFHIARQFASLDHISGGRAGWNVVTSSIESTALNFSGEKHLEHHLRYQRAEEFVEVVKGLWDSWEEDAFIRNKETGEFFDKEKMHELNHKGTYFSVRGPLNVARTPQGQPVIIQAGSSGDGQALAAKTAEVIFTAQNHLESAQAFYQSIKEQAAELGRDPEKIAIMPGIFPVIADTEEEAQAKYQELQDLIIPSVGLQILQNYLGGIDLSAYPLDGPLPQLDADASNAVKSRFKLVQEMAERDNMTIRQLYQYVAGSRGHHIFVGTPGQLADKMQEWVDKKACDGFNIMPPLLPEGLELFVDKVVPILQERGLFRKEYEGATLRDHFGLDKPANRYSK
>NZ_LT603683.1|WP_046130681.1|3501882_3502380_-|GNAT-family-N-acetyltransferase
MTRRYRMADESDAKELLALTERAYEPIRKLGIHFAAAHADLDLVLNNIRKNACYVMEEDGRIIATISIRMPWGQQPGPYGVPHIWWFAVDPASGKKGVGSELLEWLEQTILRDTLKVPFVSLGTADKHPWLIDMYERKGYVRSGEQDLGKGHITVYMKKQLRTDL
>NZ_LT603683.1|WP_046133032.1|3515973_3516276_-|hypothetical-protein
MQSVEHEGFIMDVPANLFRGIESVGGRLKLTSESLFFTSHGVNIQNKPLDIKIQDIAKVEKRNTFLVVPNGLKVVLKNQQEYKFVVAKRQEFFNHLENLL
>NZ_LT603683.1|WP_157759345.1|3517370_3517562_-|hypothetical-protein
MYSRNCNIPESSGAAFIDGNNMFNTLLLEKNGQFPACEYFRSCFFGKPYGILGMIPMRMVKKM
>NZ_LT603683.1|WP_046132332.1|3523702_3524806_-|GntR-family-transcriptional-regulator
MSEHTKYSMVKNQIKSWIYEGKVKPGEKIHSENELMKIFDVSRHTIRQAIGDLVHEGLLYREQGSGTYCSQRLRPSEKGRERHKMIGVITTYLSDYIFPHIIRGIESTLSNEGYTLIVASTNNDIEKEKQCLVNMLDKDIDGLIVEPTKTGSINPNLNYYLTLEQHHIPYLMINQFYQELNPPHFILDDEYGGFIATDHLIKLGHERVFGLFKQDDMQGVNRMKGFIRAFRENGLSFYPEMVVTYETENKEEKTITEVRKRLSSQEPPTAIFCYNDQIALLVLDVIREFGLKIPEDISIVGYDDSHLSQASEVKLTSVTHPKMQMGIEAAKWMIAKVEGRNMDQLEHSKVYKPELIVRQSTAKLKNG
>NZ_LT603683.1|WP_046132333.1|3525171_3525756_+|energy-coupled-thiamine-transporter-ThiT
MNQSKQLVRLIEIAVMTGIAIVLDIASGMFLKMPQGGSIAIMMIPLFLISFRWGLKAGLITGFLAGLLQFVTGGLYAVHPVQFLLDYFIAPTAAGIGGLFAGPIRKAAAAKAKGKLVSYVTVAVFFGSGLKFLAHVISGAVFFGNYAPKGTPVWIYTLTYNATYMLPSFIICAIVLCLLLLTAPRLLERSIDKR
>NZ_LT603683.1|WP_046132346.1|3525771_3526344_-|class-D-sortase
MITAGLYVAATNAFKLFQGRTLSAQQPAEKKPAEKPSVQTGKKQKAETVRTFETGEKIGDLVIPKMKARLPIYHGTDEDELQKGVGHFAGSVLPGEDDNSVLSGHRDTVFRRLGEVGKGDRLIVEAEYGTFTYKVKKVRIVDADDRTVIVPKPRATLTVSTCYPFDFIGSAPERYVLVAELIKTQKKRNL
>NZ_LT603683.1|WP_046132334.1|3526410_3527406_-|processed-acidic-surface-protein
MKKRMMAFLICALFLVPSAEAFAAPKQSELNEYLGEIGMTEKELEAYLQDTYDESLKGFESAEELRDFLGERLDEKRLASYLKDYGLNEKEAVKLLVDNGYMEEGQSILDAFMFEYELDDALWNVTTDEGDAAIENPFQELGVDDQEWERLIKHLRSVREKNPNLEDELMAIGERLEAVADFETVTELKAKDIAQMLSILHDLQQTLEVKTKYYLVKDGKKKEVSLTTPVSADELKGASLLVQVYDLEGNFILDVLLTPDMIGSDLFHETGAKVKQTQTAVQHDTKKQHVKKTVRGAKLPKTAGHYAEWSILGFVLILSGFFLIRRLRKAA
>NZ_LT603683.1|WP_046132335.1|3527564_3527753_+|hypothetical-protein
MNPYYMMLFCYVLSIIHFLIGYREALKISGADGLVDGTVMISCIPLGVVFAFFSHFFWKMTI
>NZ_LT603683.1|WP_046132336.1|3527986_3529099_+|RapH-N-terminal-domain-containing-protein
MGKAVASQEVANMLNDWYILMKKRDISRSIEMKDDIDKAIEEMEEDQDVLVYYQMLDFRLRLLLEDISQSATEKLEAIEFHDNDPKSTDDKLNYYFYLFKGIYEDYKQNHTEALNFFRIAEKRLGAIQNEIEKAEFHYKIGVLYYNLKATWLSIHHINIAAGIFQGYEGYTKRVINCKMLIGLNYIDQFKFSESEALLNEAIDRTEKIGDQFLLPYTYYNMGFLKSKEEKHEEALKYYNKAFAIKDFESKAQYAYLLCVYETVRSLLKTNSQDKAFQWIDVGFKKSREMNSKIFELKFKILHTLYTSPPNKMEMIKDFVHQLETEKAWVDLEELLMDVANYYREKKLYEEAIYFYIKTDKASKLAGRGGE
>NZ_LT603683.1|WP_046132337.1|3529336_3529984_+|pyroglutamyl-peptidase-I
MKKKVLLTGFDPFGGESVNPAWEAVKRLHGETAGDISIAAEKIPTVFGKSAVVLEKAIEKHQPDIIICTGQAGGRPHITPERVAINIDDARIADNEGMMPIDENIAQDGPAAYWSTLPIKRIVQNLRHNGIPASVSNSAGTFVCNHLFYRLMHHLALSSSGARGGFIHIPYLPEQTIDKKEPSLSLDVIVEALRIAALTAANHETDIREQGGSLD
>NZ_LT603683.1|WP_099047070.1|3530113_3530596_+|DinB-family-protein
MSIFNEARKETWSEIRELSDDDINKRPEKDEWSIQEVLDHLKKLDLQAARLFRERIRSAPFRTIEAKPVHVSEDRSVKRKAPDSLEPERKTTDLLAIKAELDHARSQLTTVIATLQEEDFERVLPHSVFKELTVRQWIDFIGHHEKRHVKQIQEIKKKLS

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP015439	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence	255884-255939	6	0.893
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	10424-10479	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	70771-70826	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	835-890	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	75822-75877	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NC_020451	Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence	1967-2022	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP015440	Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence	64780-64835	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	1325-1380	7	0.875
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	483788-483843	8	0.857
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NC_004604	Bacillus megaterium QM B1551 plasmid pBM400, complete sequence	46417-46472	9	0.839
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	CP031730	Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence	5220-5275	11	0.804
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP041068	Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence	36188-36243	11	0.804
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NZ_CP032535	Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence	36096-36151	11	0.804
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	CP041516	Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence	17877-17932	11	0.804
NZ_LT603683_1	1.1\|3514166\|56\|NZ_LT603683\|CRISPRCasFinder	3514166-3514221	56	NC_048753	Lactobacillus phage 3-521, complete genome	13552-13607	11	0.804

1. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP015439 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_1, complete sequence) position: , mismatch: 6, identity: 0.893

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattatatacg	Protospacer
********************************************** *...**. *

2. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagt	Protospacer
********************************************** *. .* .*

3. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagt	Protospacer
********************************************** *. .* .*

4. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagt	Protospacer
********************************************** *. .* .*

5. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagt	Protospacer
********************************************** *. .* .*

6. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NC_020451 (Vibrio coralliilyticus strain ATCC BAA-450 plasmid, complete sequence) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcattttagttatg	Protospacer
**********************************************.*..  *. *

7. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP015440 (Anoxybacillus amylolyticus strain DSM 15939 plasmid pDSM15939_2, complete sequence) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcat-ctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcataataatatat-	Protospacer
**********************************************  * ..**.

8. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 7, identity: 0.875

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatattttaaagt	Protospacer
********************************************** *. .* .*

9. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.857

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccactaaactacacccgcatggttaaaagt	Protospacer
**********************************************  .  * .*

10. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NC_004604 (Bacillus megaterium QM B1551 plasmid pBM400, complete sequence) position: , mismatch: 9, identity: 0.839

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccattaaactacacccgcatgttttcttaa	Protospacer
*****************************.**************** *. . * ..

11. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.804

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccattaaactacacccgctttatttttaaa	Protospacer
*****************************.************** *. . . *...

12. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 11, identity: 0.804

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccattaaactacacccgcttatttttaaaa	Protospacer
*****************************.************** * *. .  ...

13. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NZ_CP032535 (Bacillus megaterium NCT-2 plasmid pNCT2_7, complete sequence) position: , mismatch: 11, identity: 0.804

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccattaaactacacccgcttatttttaaaa	Protospacer
*****************************.************** * *. .  ...

14. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.804

catcagcttggaaggctgaggttttaccactaaactacacccgcatctcgcatggg	CRISPR spacer
catcagcttggaaggctgaggttttaccattaaactacacccgcttatttttaaaa	Protospacer
*****************************.************** * *. .  ...

15. spacer 1.1|3514166|56|NZ_LT603683|CRISPRCasFinder matches to NC_048753 (Lactobacillus phage 3-521, complete genome) position: , mismatch: 11, identity: 0.804

catcagcttggaaggctgaggttttaccactaaactacacccgcat------ctcgcatg	CRISPR spacer
ctacagcttggaaggctgtggttttaccactaaactatacccgcgtgaactactcg----	Protospacer
*  *************** ******************.******.*      ****

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

357227 : 363632

Caulobacter_phage(50.0%)

protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046130876.1\|357227_357830_+	TerD family protein	K4JRX3	Caulobacter_phage	3.7e-24	30.9
WP_046130877.1\|357859_358441_+	TerD family protein	K4JRX3	Caulobacter_phage	4.8e-29	39.9
WP_046130878.1\|358506_359085_+	TerD family protein	K4JRX3	Caulobacter_phage	8.1e-29	37.2
WP_046130879.1\|359153_359927_+	TerC family protein	S5MAL1	Bacillus_phage	3.3e-78	63.5
WP_046130880.1\|360030_361218_+	HpcH/HpaI aldolase/citrate lyase family protein	NA	NA	NA	NA
WP_046130881.1\|361207_362530_+	hypothetical protein	A0A172Q0Y1	Acinetobacter_phage	3.9e-10	28.1
WP_046130882.1\|362522_363632_+\|protease	cysteine protease StiP family protein	A0A172Q0S8	Acinetobacter_phage	6.1e-41	34.5

DBSCAN-SWA_2

751292 : 761217

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046130447.1\|751292_752588_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	4.5e-19	27.0
WP_046130446.1\|752663_753380_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D8KNF0	Synechococcus_phage	9.7e-48	43.7
WP_046130445.1\|753381_753636_+	phosphoribosylformylglycinamidine synthase subunit PurS	M4QPE7	Synechococcus_phage	4.7e-05	33.3
WP_046130444.1\|753632_754316_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_046130443.1\|754299_756528_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	9.7e-163	41.5
WP_046130442.1\|756503_757934_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.7e-51	32.7
WP_046130441.1\|758057_759098_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	2.7e-62	46.3
WP_046130440.1\|759094_759682_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	8.3e-29	39.5
WP_046130439.1\|759678_761217_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	9.6e-77	52.0

DBSCAN-SWA_3

1324972 : 1375456

uncultured_Caudovirales_phage(33.33%)

coat,portal,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046131188.1\|1324972_1325425_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046131187.1\|1325586_1326069_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046131186.1\|1326200_1326707_-\|coat	spore coat protein	NA	NA	NA	NA
WP_046131185.1\|1326774_1327131_-	hypothetical protein	NA	NA	NA	NA
WP_046131184.1\|1327178_1327565_-\|coat	spore coat protein	NA	NA	NA	NA
WP_082094112.1\|1327679_1328093_+	DUF1360 domain-containing protein	NA	NA	NA	NA
WP_046131182.1\|1328387_1328597_+	hypothetical protein	NA	NA	NA	NA
WP_052948531.1\|1328677_1328827_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_046131181.1\|1328957_1329215_+	sporulation protein	NA	NA	NA	NA
WP_046131180.1\|1329256_1331536_-	ATP-dependent helicase	A0A068EQC7	Bacillus_phage	3.4e-86	33.8
WP_046131179.1\|1331653_1331911_+	hypothetical protein	NA	NA	NA	NA
WP_046131178.1\|1331960_1332548_-	DedA family protein	NA	NA	NA	NA
WP_046131177.1\|1332642_1333629_-	UDP-glucose 4-epimerase GalE	A0A2K9L5H6	Tupanvirus	7.3e-54	37.2
WP_046131176.1\|1333625_1334516_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.7e-84	54.1
WP_046131175.1\|1334544_1334937_-	GtrA family protein	NA	NA	NA	NA
WP_046131174.1\|1335135_1335564_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046131173.1\|1335573_1336083_-	hypothetical protein	NA	NA	NA	NA
WP_065894230.1\|1336148_1336871_-	esterase family protein	NA	NA	NA	NA
WP_046131171.1\|1337442_1337874_-	hypothetical protein	NA	NA	NA	NA
WP_046131170.1\|1338219_1339338_+	methionine biosynthesis PLP-dependent protein	A0A0B5JD48	Pandoravirus	9.0e-16	26.4
WP_046131169.1\|1339334_1340513_+	cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	2.8e-20	29.6
WP_082094111.1\|1341313_1341709_+	DUF3888 domain-containing protein	NA	NA	NA	NA
WP_046131167.1\|1342022_1342295_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_046131166.1\|1342602_1343376_-	acetoin reductase	NA	NA	NA	NA
WP_046131165.1\|1344377_1344740_-	hypothetical protein	NA	NA	NA	NA
WP_046131164.1\|1344795_1345596_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_046131163.1\|1346787_1346994_+	DUF1657 domain-containing protein	NA	NA	NA	NA
WP_046131162.1\|1348337_1348745_+	hypothetical protein	NA	NA	NA	NA
WP_052948530.1\|1349420_1349627_+	hypothetical protein	NA	NA	NA	NA
WP_052948529.1\|1349623_1350292_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046131161.1\|1350424_1351348_+	TIM barrel protein	NA	NA	NA	NA
WP_046131160.1\|1351373_1352540_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_046131320.1\|1352597_1354217_-	APC family permease	NA	NA	NA	NA
WP_046131159.1\|1354444_1354657_-	hypothetical protein	NA	NA	NA	NA
WP_046131158.1\|1355097_1355985_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_046131157.1\|1356224_1358051_+	assimilatory sulfite reductase (NADPH) flavoprotein subunit	NA	NA	NA	NA
WP_046131156.1\|1358077_1359796_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA
WP_046131155.1\|1359853_1360729_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_046131154.1\|1360830_1361709_+	DMT family transporter	NA	NA	NA	NA
WP_046131153.1\|1361773_1362151_+	hypothetical protein	NA	NA	NA	NA
WP_046131152.1\|1362195_1362741_-	hypothetical protein	NA	NA	NA	NA
WP_046131151.1\|1363126_1363897_+	LysM peptidoglycan-binding domain-containing protein	A0A217ER34	Bacillus_phage	2.3e-26	68.2
WP_046131149.1\|1364639_1366061_-	multidrug efflux MFS transporter	A0A0M3UL24	Mycobacterium_phage	2.2e-19	24.9
WP_046131148.1\|1366062_1366644_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_046131147.1\|1366753_1367167_-	hypothetical protein	NA	NA	NA	NA
WP_046131146.1\|1367298_1367928_+	poly-gamma-glutamate hydrolase family protein	F8WQ53	Bacillus_phage	3.2e-47	48.2
WP_052948528.1\|1367930_1368593_-	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	1.4e-40	52.3
WP_046131145.1\|1368762_1369116_-	helix-turn-helix transcriptional regulator	A0A2H4J6F9	uncultured_Caudovirales_phage	1.1e-17	46.9
WP_164918146.1\|1369545_1369689_+	hypothetical protein	NA	NA	NA	NA
WP_099047026.1\|1369685_1369856_+	hypothetical protein	NA	NA	NA	NA
WP_046131144.1\|1369852_1370692_+\|portal	phage portal protein	S6BFM4	Thermus_phage	9.4e-26	30.3
WP_046131143.1\|1370591_1371392_+	ATP-binding protein	A6XMI1	Bacillus_virus	1.1e-60	48.3
WP_164918147.1\|1371391_1371565_+	hypothetical protein	NA	NA	NA	NA
WP_046131142.1\|1371665_1372001_+	hypothetical protein	NA	NA	NA	NA
WP_046131141.1\|1371991_1372201_+	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	3.3e-12	57.8
WP_046131318.1\|1374025_1374856_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA
WP_046131139.1\|1374908_1375178_+	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	1.8e-23	61.8
WP_046131138.1\|1375192_1375456_+\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	1.8e-28	71.3

DBSCAN-SWA_4

1480119 : 1521443

Bacillus_phage(44.74%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046132317.1\|1480119_1482213_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	2.5e-128	41.8
WP_046132303.1\|1482461_1483496_+	membrane protein	NA	NA	NA	NA
WP_046132318.1\|1483746_1484406_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.5e-66	59.0
WP_046132304.1\|1484407_1484848_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_046132305.1\|1484840_1485572_+	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	8.1e-58	46.8
WP_046132306.1\|1485591_1486083_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.3e-56	74.5
WP_065894728.1\|1486466_1487318_+	hypothetical protein	A0A1P8CWU6	Bacillus_phage	3.2e-37	39.5
WP_065894242.1\|1487331_1487823_+	hypothetical protein	NA	NA	NA	NA
WP_046132611.1\|1487819_1488254_+	helix-turn-helix domain-containing protein	A0A2H4IZR0	uncultured_Caudovirales_phage	6.1e-37	61.9
WP_065894247.1\|1488467_1488806_+	hypothetical protein	NA	NA	NA	NA
WP_065894248.1\|1488795_1489125_+	hypothetical protein	A0A0N9SHL8	Paenibacillus_phage	3.2e-06	33.0
WP_167543082.1\|1489154_1489298_+	hypothetical protein	NA	NA	NA	NA
WP_065894250.1\|1489321_1489684_+	hypothetical protein	NA	NA	NA	NA
WP_065894252.1\|1489698_1490118_+	hypothetical protein	NA	NA	NA	NA
WP_065894254.1\|1490101_1490476_+	hypothetical protein	A0A2H4J134	uncultured_Caudovirales_phage	4.5e-20	42.2
WP_157678824.1\|1491550_1491688_+	hypothetical protein	NA	NA	NA	NA
WP_167543083.1\|1491704_1491875_+	hypothetical protein	F8WPM2	Bacillus_phage	1.1e-21	84.9
WP_065894257.1\|1491871_1492075_+	hypothetical protein	A0A1P8CX62	Bacillus_phage	5.2e-15	63.2
WP_065894263.1\|1492093_1492861_+	DNA replication protein	A0A0N7GFF0	Paenibacillus_phage	2.3e-63	50.4
WP_065894267.1\|1493070_1493571_+	hypothetical protein	NA	NA	NA	NA
WP_065894270.1\|1493570_1494020_+	hypothetical protein	S5MUL4	Brevibacillus_phage	1.9e-25	42.5
WP_065894273.1\|1494019_1494223_+	hypothetical protein	NA	NA	NA	NA
WP_065894275.1\|1494219_1495584_+	DNA helicase	A0A2H4IZL9	uncultured_Caudovirales_phage	6.7e-122	51.2
WP_065894277.1\|1495718_1496732_+	DNA primase	A0A2H4J6E6	uncultured_Caudovirales_phage	2.1e-72	45.7
WP_065894280.1\|1496825_1497248_-	ImmA/IrrE family metallo-endopeptidase	A0A0S2SXM3	Bacillus_phage	2.5e-43	62.3
WP_065894282.1\|1497257_1497686_-	helix-turn-helix transcriptional regulator	Q5YAA4	Bacillus_phage	6.9e-41	60.3
WP_065894284.1\|1498026_1498554_+	hypothetical protein	A0A2H4J6V7	uncultured_Caudovirales_phage	2.0e-13	31.7
WP_164918143.1\|1498696_1498849_+	hypothetical protein	NA	NA	NA	NA
WP_065894285.1\|1498845_1499370_+	hypothetical protein	NA	NA	NA	NA
WP_065894286.1\|1499617_1500397_+	hypothetical protein	A0A2H4IZK6	uncultured_Caudovirales_phage	4.1e-60	51.9
WP_065894287.1\|1500574_1501006_+	hypothetical protein	A0A2H4IZM8	uncultured_Caudovirales_phage	2.6e-11	40.3
WP_065894289.1\|1501005_1502061_+	hypothetical protein	A0A142F1R1	Bacillus_phage	6.5e-16	28.9
WP_065894294.1\|1502423_1504670_+	DNA polymerase I	A0A2H4J6W7	uncultured_Caudovirales_phage	1.2e-171	48.3
WP_065894296.1\|1504684_1505728_+	hypothetical protein	A0A0N9SHN6	Paenibacillus_phage	8.8e-82	53.8
WP_065894298.1\|1505720_1506281_+	hypothetical protein	A0A0N9ST03	Paenibacillus_phage	2.9e-07	42.4
WP_065894299.1\|1506281_1506569_+	hypothetical protein	NA	NA	NA	NA
WP_065894301.1\|1506568_1506934_+	hypothetical protein	A0A218KDD8	Bacillus_phage	2.6e-12	39.3
WP_048356259.1\|1506938_1507196_+	hypothetical protein	NA	NA	NA	NA
WP_065894302.1\|1507192_1507393_+	hypothetical protein	NA	NA	NA	NA
WP_048405729.1\|1507389_1507578_+	hypothetical protein	NA	NA	NA	NA
WP_065894304.1\|1507717_1508080_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A142F1R4	Bacillus_phage	3.6e-27	54.9
WP_083217247.1\|1508086_1510186_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	U5PY35	Bacillus_phage	0.0e+00	78.1
WP_083217248.1\|1510211_1510550_+	DUF1140 family protein	NA	NA	NA	NA
WP_065894307.1\|1510588_1511557_+	class 1b ribonucleoside-diphosphate reductase subunit beta	F8WQ21	Bacillus_phage	2.5e-147	79.1
WP_046132574.1\|1511607_1512162_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	D2XR49	Bacillus_phage	8.0e-42	54.7
WP_046132573.1\|1512161_1512389_+	hypothetical protein	A0A1P8CX04	Bacillus_phage	2.1e-17	62.5
WP_046132730.1\|1512404_1513163_+	FAD-dependent thymidylate synthase	A0A142F1S2	Bacillus_phage	4.6e-88	69.0
WP_065894309.1\|1513132_1513702_+	3D domain-containing protein	A0A142F1S8	Bacillus_phage	4.9e-26	60.4
WP_046132570.1\|1513889_1514345_+	methyltransferase domain-containing protein	A8ATY8	Listeria_phage	1.9e-65	75.3
WP_046132569.1\|1514361_1515327_+	hypothetical protein	A0A1P8CWY7	Bacillus_phage	1.6e-21	43.5
WP_065894311.1\|1515323_1515884_+	dephospho-CoA kinase	A0A0N9SJZ0	Paenibacillus_phage	5.1e-36	46.1
WP_052948565.1\|1515896_1516979_+	DNA cytosine methyltransferase	A0A1P8CX13	Bacillus_phage	2.4e-135	70.2
WP_065894313.1\|1516967_1517354_-	hypothetical protein	NA	NA	NA	NA
WP_046132728.1\|1517456_1517846_+	DUF134 domain-containing protein	NA	NA	NA	NA
WP_065894315.1\|1517838_1518327_+	hypothetical protein	A0A0N7GFF4	Paenibacillus_phage	8.1e-22	43.8
WP_046132565.1\|1518415_1519216_+	hypothetical protein	A0A0N9S810	Paenibacillus_phage	5.3e-71	54.2
WP_065894316.1\|1519411_1520839_-	lipase	NA	NA	NA	NA
WP_083217249.1\|1520889_1521210_+	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_099047031.1\|1521269_1521443_-	hypothetical protein	A0A1P8CWV7	Bacillus_phage	2.2e-22	85.7

DBSCAN-SWA_5

1526642 : 1596845

Bacillus_phage(40.74%)

terminase,tail,plate,holin,portal,transposase,integrase

attL 1529510:1529524|attR 1564836:1564850

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065894327.1\|1526642_1527197_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J6I5	uncultured_Caudovirales_phage	9.9e-32	45.1
WP_065894331.1\|1527905_1529342_+\|terminase	phage terminase large subunit	A0A0N9RZA7	Paenibacillus_phage	7.7e-129	52.0
WP_065894333.1\|1529408_1530893_+\|portal	phage portal protein	D9ZNC8	Clostridium_phage	7.7e-15	21.7
1529510:1529524	attL	NA	NA	NA	NA
WP_065894335.1\|1530986_1531712_+	scaffolding protein	Q4ZC70	Staphylococcus_virus	3.2e-06	54.2
WP_065894338.1\|1531770_1532895_+	DUF5309 family protein	NA	NA	NA	NA
WP_065894340.1\|1532946_1533366_+	hypothetical protein	NA	NA	NA	NA
WP_065894342.1\|1533365_1533557_+	hypothetical protein	NA	NA	NA	NA
WP_046132549.1\|1533571_1533910_+	hypothetical protein	NA	NA	NA	NA
WP_052948563.1\|1533906_1534716_+	hypothetical protein	NA	NA	NA	NA
WP_065894344.1\|1534731_1535121_+	hypothetical protein	NA	NA	NA	NA
WP_065894346.1\|1535117_1535474_+	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_065894348.1\|1535470_1535911_+	hypothetical protein	NA	NA	NA	NA
WP_065894350.1\|1535928_1536399_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_083217251.1\|1536352_1536649_+	fibronectin type III domain-containing protein	Q0PDK9	Bacillus_phage	7.8e-28	73.0
WP_065894351.1\|1536705_1537071_+	hypothetical protein	NA	NA	NA	NA
WP_065894352.1\|1537154_1537373_+	hypothetical protein	NA	NA	NA	NA
WP_065894353.1\|1537388_1540526_+\|tail	phage tail tape measure protein	A0A288WG88	Bacillus_phage	1.7e-80	44.9
WP_065894356.1\|1540522_1541341_+\|tail	phage tail family protein	A6M962	Geobacillus_virus	8.2e-75	53.0
WP_099047032.1\|1541352_1542702_+\|tail	phage tail protein	A6M966	Geobacillus_virus	1.1e-52	35.7
WP_065894358.1\|1542717_1545282_+	peptidase G2	D6R401	Bacillus_phage	0.0e+00	65.9
WP_065894360.1\|1545294_1546662_+\|plate	phage baseplate upper protein	M4ZRP1	Bacillus_phage	1.4e-63	52.2
WP_048355856.1\|1546676_1546961_+	hypothetical protein	M4ZR44	Bacillus_phage	5.6e-15	44.7
WP_048407040.1\|1546962_1547184_+	XkdX family protein	NA	NA	NA	NA
WP_046132536.1\|1547187_1547394_+	hypothetical protein	A0A290GDY2	Caldibacillus_phage	8.7e-10	47.9
WP_065894361.1\|1547463_1548405_+	LysM peptidoglycan-binding domain-containing protein	Q9ZXD7	Bacillus_phage	3.9e-97	64.1
WP_065894362.1\|1548425_1548656_+\|holin	phage holin	A0A1D6Z272	Staphylococcus_phage	2.8e-17	57.1
WP_065894366.1\|1548911_1549106_+	hypothetical protein	NA	NA	NA	NA
WP_065894372.1\|1549113_1549638_+	GNAT family N-acetyltransferase	A0A0M3ULL7	Bacillus_phage	5.8e-34	45.9
WP_065894373.1\|1549837_1550638_+	hypothetical protein	NA	NA	NA	NA
WP_065894374.1\|1550690_1550903_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_065894380.1\|1551064_1551844_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_065894382.1\|1552141_1553287_+\|integrase	site-specific integrase	A0A1B0T6A8	Bacillus_phage	4.7e-44	32.7
WP_128748085.1\|1553779_1553968_-	hypothetical protein	NA	NA	NA	NA
WP_046132307.1\|1554118_1554634_-	damage-inducible protein DinB	NA	NA	NA	NA
WP_046132308.1\|1554980_1555214_+	hypothetical protein	NA	NA	NA	NA
WP_046132309.1\|1555354_1555843_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046132310.1\|1555874_1556216_-	hypothetical protein	NA	NA	NA	NA
WP_046132311.1\|1556597_1557530_+	DUF1672 family protein	NA	NA	NA	NA
WP_046132312.1\|1557545_1558721_+	hypothetical protein	NA	NA	NA	NA
WP_046132313.1\|1558729_1558963_+	hypothetical protein	NA	NA	NA	NA
WP_128748087.1\|1559096_1559648_+	hypothetical protein	NA	NA	NA	NA
WP_006638423.1\|1559762_1559951_-	DUF2187 family protein	NA	NA	NA	NA
WP_046132315.1\|1560120_1560315_+	hypothetical protein	NA	NA	NA	NA
WP_046132316.1\|1560546_1561149_+	cell wall hydrolase	A0A172JHR8	Bacillus_phage	1.4e-26	51.2
WP_046132458.1\|1562938_1564279_+	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_152654495.1\|1564350_1564833_+	redoxin domain-containing protein	NA	NA	NA	NA
WP_046132456.1\|1565089_1566997_+	cadmium-translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.0e-112	38.8
1564836:1564850	attR	NA	NA	NA	NA
WP_099047033.1\|1567072_1568432_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-108	72.5
WP_046132442.1\|1568573_1569668_+	aminopeptidase P family protein	NA	NA	NA	NA
WP_046132443.1\|1570007_1570979_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.6e-13	23.4
WP_096891708.1\|1571046_1571943_+	transcription antiterminator	NA	NA	NA	NA
WP_046132445.1\|1572163_1574263_+	PTS transporter subunit EIIC	A0A2I7SAJ6	Vibrio_phage	8.1e-10	42.0
WP_006638411.1\|1574354_1574621_+	phosphocarrier protein HPr	NA	NA	NA	NA
WP_046132446.1\|1574620_1576339_+	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA
WP_046131854.1\|1578124_1578352_+	transcriptional regulator	NA	NA	NA	NA
WP_046131855.1\|1578421_1579450_+	spore photoproduct lyase	NA	NA	NA	NA
WP_046131858.1\|1579519_1580149_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_046131856.1\|1580293_1582261_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.6e-12	53.4
WP_046131859.1\|1582360_1583146_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_046131857.1\|1583158_1584031_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_065894138.1\|1584062_1585493_-\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	5.3e-122	50.0
WP_046132426.1\|1585624_1586353_-	hypothetical protein	A0A0E3T7R5	Bacillus_phage	1.5e-40	65.6
WP_046132425.1\|1586697_1588806_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_046132424.1\|1588966_1590778_+	PAS domain-containing protein	Q8QKV7	Ectocarpus_siliculosus_virus	7.2e-07	26.0
WP_046132423.1\|1590804_1591974_-	aminotransferase A	NA	NA	NA	NA
WP_167543081.1\|1592134_1592290_-	hypothetical protein	NA	NA	NA	NA
WP_046132422.1\|1592434_1592974_+	RDD family protein	NA	NA	NA	NA
WP_099047034.1\|1593049_1594369_+	MFS transporter	NA	NA	NA	NA
WP_046132420.1\|1594443_1595364_+	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	5.4e-51	35.4
WP_046131917.1\|1595492_1596845_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	4.2e-84	40.3

DBSCAN-SWA_6

1889880 : 1900515

Bacillus_phage(100.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065894416.1\|1889880_1890978_+	RapH N-terminal domain-containing protein	A0A1P8CWN8	Bacillus_phage	1.9e-39	27.9
WP_164918151.1\|1890977_1891115_+	hypothetical protein	NA	NA	NA	NA
WP_048354003.1\|1891906_1892215_-	hypothetical protein	NA	NA	NA	NA
WP_048354004.1\|1892233_1892515_-\|holin	phage holin	A0A1P8CWN5	Bacillus_phage	2.4e-10	44.1
WP_021837858.1\|1892533_1892920_-	hypothetical protein	A0A1P8CWP1	Bacillus_phage	3.1e-40	72.7
WP_065894418.1\|1893051_1894143_-	N-acetylmuramoyl-L-alanine amidase	A0A1P8CWN6	Bacillus_phage	2.6e-113	69.5
WP_157759328.1\|1894295_1894460_-	hypothetical protein	NA	NA	NA	NA
WP_046132710.1\|1894479_1897044_-	Pre-neck appendage protein	D6R401	Bacillus_phage	2.2e-158	40.6
WP_046132709.1\|1897062_1897860_-	hypothetical protein	O64043	Bacillus_phage	5.5e-76	59.7
WP_046132708.1\|1897875_1900515_-	hypothetical protein	A0A1P8CWQ0	Bacillus_phage	5.8e-239	51.3

DBSCAN-SWA_7

1920415 : 1946505

Bacillus_phage(79.17%)

integrase

attL 1916169:1916184|attR 1945175:1945190

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1916169:1916184	attL	NA	NA	NA	NA
WP_052948571.1\|1920415_1921495_-	serine/threonine protein kinase	G9L673	Escherichia_phage	9.5e-55	39.1
WP_046132743.1\|1921487_1921985_-	hypothetical protein	NA	NA	NA	NA
WP_006640209.1\|1922128_1923130_-\|integrase	site-specific integrase	A0A1P8CWP6	Bacillus_phage	1.3e-170	85.9
WP_046132695.1\|1923144_1923564_-	hypothetical protein	A0A1P8CWQ4	Bacillus_phage	5.7e-40	54.9
WP_046132694.1\|1923563_1924046_-	hypothetical protein	A0A1P8CWQ6	Bacillus_phage	1.3e-16	34.6
WP_046132693.1\|1924084_1924276_-	XkdX family protein	NA	NA	NA	NA
WP_046132692.1\|1924272_1924590_-	hypothetical protein	NA	NA	NA	NA
WP_046132691.1\|1924602_1926258_-	hypothetical protein	M4ZRP1	Bacillus_phage	6.0e-16	60.3
WP_046132690.1\|1926260_1926626_-	hypothetical protein	A0A1P8CWQ8	Bacillus_phage	1.2e-22	47.7
WP_046132689.1\|1927197_1928004_-	hypothetical protein	A0A0N7GFG4	Staphylococcus_phage	7.1e-31	33.2
WP_065894420.1\|1928048_1928768_-	hypothetical protein	A0A1P8CWQ7	Bacillus_phage	2.1e-50	42.9
WP_046132687.1\|1928764_1929295_-	hypothetical protein	O64060	Bacillus_phage	5.0e-57	62.5
WP_046132686.1\|1929291_1929951_-	hypothetical protein	A0A1P8CWR8	Bacillus_phage	1.2e-79	68.1
WP_052948568.1\|1929937_1930180_-	hypothetical protein	A0A1P8CWS7	Bacillus_phage	1.0e-09	49.4
WP_046132685.1\|1930176_1930575_-	hypothetical protein	A0A1P8CWR5	Bacillus_phage	3.4e-42	63.6
WP_046132684.1\|1930586_1931057_-	hypothetical protein	A0A1P8CWS5	Bacillus_phage	8.5e-69	80.1
WP_046132683.1\|1931091_1932108_-	hypothetical protein	A0A1P8CWR9	Bacillus_phage	9.2e-161	84.6
WP_046132682.1\|1932152_1932755_-	hypothetical protein	A0A1P8CWS2	Bacillus_phage	2.0e-78	84.1
WP_046132681.1\|1932780_1934220_-	hypothetical protein	A0A1P8CWR1	Bacillus_phage	5.0e-176	65.9
WP_046132680.1\|1934253_1935774_-	hypothetical protein	O64068	Bacillus_phage	1.4e-245	82.0
WP_046132679.1\|1935791_1937561_-	hypothetical protein	O64069	Bacillus_phage	0.0e+00	91.7
WP_046132678.1\|1937544_1938477_-	hypothetical protein	A0A1P8CWS6	Bacillus_phage	8.3e-140	76.3
WP_046132677.1\|1938757_1939948_-	metallophosphoesterase	A0A0N9SK37	Staphylococcus_phage	7.0e-67	38.0
WP_046132676.1\|1939960_1940152_-	YonK family protein	A0A1P8CWT3	Bacillus_phage	8.9e-25	88.9
WP_046132675.1\|1940796_1941312_-	hypothetical protein	L0L915	Bacillus_phage	1.9e-37	49.7
WP_046132674.1\|1941377_1941608_-	hypothetical protein	NA	NA	NA	NA
WP_006640182.1\|1942552_1942828_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	3.5e-30	75.6
WP_046132673.1\|1942933_1943734_-	hypothetical protein	NA	NA	NA	NA
WP_046132672.1\|1943730_1946505_-	hypothetical protein	H7BV05	unidentified_phage	2.3e-105	29.4
1945175:1945190	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1971392 : 1983428

Bacillus_phage(83.33%)

integrase

attL 1964298:1964312|attR 1974756:1974770

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1964298:1964312	attL	NA	NA	NA	NA
WP_065894450.1\|1971392_1972769_+	hypothetical protein	A0A1P8CWX1	Bacillus_phage	6.8e-58	32.9
WP_065894452.1\|1972786_1973791_+\|integrase	site-specific integrase	O64101	Bacillus_phage	1.3e-58	39.1
WP_048356239.1\|1974178_1974451_+	YopT family protein	NA	NA	NA	NA
WP_046132647.1\|1975239_1975977_+	hypothetical protein	A0A0A8WIT2	Clostridium_phage	2.3e-68	57.1
1974756:1974770	attR	NA	NA	NA	NA
WP_065894454.1\|1975973_1976321_+	hypothetical protein	NA	NA	NA	NA
WP_065894458.1\|1976348_1976597_+	hypothetical protein	NA	NA	NA	NA
WP_065894459.1\|1976625_1976913_+	hypothetical protein	A0A0E3DEX0	Bacillus_phage	9.3e-18	51.6
WP_157759331.1\|1976949_1977093_+	hypothetical protein	NA	NA	NA	NA
WP_065894460.1\|1977111_1977360_+	hypothetical protein	NA	NA	NA	NA
WP_065894462.1\|1977395_1977686_+	hypothetical protein	A0A127AWI5	Bacillus_phage	1.7e-14	46.7
WP_048355015.1\|1977855_1978074_+	hypothetical protein	NA	NA	NA	NA
WP_048355017.1\|1978334_1978535_+	hypothetical protein	F8WPL5	Bacillus_phage	1.8e-15	60.6
WP_164918129.1\|1978567_1978711_+	hypothetical protein	NA	NA	NA	NA
WP_046132636.1\|1979242_1979770_+	hypothetical protein	U5PUK4	Bacillus_phage	3.1e-51	57.5
WP_046132634.1\|1980094_1980298_+	hypothetical protein	A0A217ER53	Bacillus_phage	3.2e-12	54.8
WP_046132633.1\|1980364_1981177_-	ATP-dependent DNA ligase	O64130	Bacillus_phage	1.2e-115	74.0
WP_046132632.1\|1981269_1981494_+	hypothetical protein	O64132	Bacillus_phage	1.7e-22	66.2
WP_046132631.1\|1981490_1981853_+	hypothetical protein	NA	NA	NA	NA
WP_065894466.1\|1981910_1982189_+	hypothetical protein	NA	NA	NA	NA
WP_065894468.1\|1982201_1982381_+	hypothetical protein	NA	NA	NA	NA
WP_065894470.1\|1982565_1983015_+	hypothetical protein	S5MUL4	Brevibacillus_phage	7.2e-25	42.5
WP_065894472.1\|1983014_1983428_+	hypothetical protein	O64129	Bacillus_phage	1.2e-58	80.6

DBSCAN-SWA_9

1986827 : 1996671

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065894474.1\|1986827_1987160_+	hypothetical protein	O64139	Bacillus_phage	1.2e-13	48.2
WP_065894479.1\|1987409_1988321_+	hypothetical protein	A0A1P8CX09	Bacillus_phage	3.1e-115	68.3
WP_046132621.1\|1988375_1989347_+	ATP-binding protein	A0A1P8CX29	Bacillus_phage	2.0e-157	85.4
WP_046132620.1\|1989388_1989859_+	hypothetical protein	A0A1P8CX08	Bacillus_phage	8.3e-56	67.3
WP_065894480.1\|1989873_1991388_+	hypothetical protein	A0A1P8CWZ7	Bacillus_phage	1.2e-236	81.3
WP_065894481.1\|1991404_1992538_+	hypothetical protein	A0A1P8CX05	Bacillus_phage	2.5e-159	69.7
WP_046132617.1\|1992541_1994263_+	single-stranded-DNA-specific exonuclease RecJ	A0A1P8CX07	Bacillus_phage	3.3e-219	66.0
WP_065894483.1\|1994278_1995688_+	PHP domain-containing protein	A0A1P8CX14	Bacillus_phage	4.0e-239	85.8
WP_052948566.1\|1995738_1996671_+	helix-turn-helix domain-containing protein	A7KV45	Bacillus_phage	4.8e-31	36.4

DBSCAN-SWA_10

2005380 : 2023609

Bacillus_phage(78.95%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_065894495.1\|2005380_2005725_+	antitoxin endoai	O64171	Bacillus_phage	1.7e-13	40.8
WP_065894497.1\|2005724_2006129_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	2.3e-38	63.6
WP_167543088.1\|2006100_2009343_+	hypothetical protein	A0A1P8CX40	Bacillus_phage	0.0e+00	85.2
WP_065894499.1\|2009365_2009587_+	hypothetical protein	A0A1P8CX04	Bacillus_phage	3.3e-23	68.5
WP_065894501.1\|2009587_2010568_+	class 1b ribonucleoside-diphosphate reductase subunit beta	R4JMU8	Bacillus_phage	2.3e-148	82.2
WP_065894503.1\|2010817_2011174_+\|tRNA	peptidyl-tRNA hydrolase	A0A1V0SFB5	Hokovirus	6.4e-08	30.6
WP_065894505.1\|2011221_2011521_+	hypothetical protein	A0A0A0RSF8	Bacillus_phage	5.7e-10	38.0
WP_065894514.1\|2011540_2011975_+	hypothetical protein	NA	NA	NA	NA
WP_065894516.1\|2012018_2012453_+	dUTP diphosphatase	A0A1P8CX51	Bacillus_phage	1.6e-66	84.5
WP_167543085.1\|2012563_2012728_+	hypothetical protein	NA	NA	NA	NA
WP_046132827.1\|2012770_2012959_+	hypothetical protein	NA	NA	NA	NA
WP_046132828.1\|2012951_2013260_+	hypothetical protein	A0A1P8CX63	Bacillus_phage	2.6e-10	52.1
WP_046132829.1\|2013249_2013807_+	hypothetical protein	G3MBK8	Bacillus_virus	3.1e-49	53.1
WP_046132830.1\|2013808_2014906_+	hypothetical protein	G3MBL0	Bacillus_virus	4.0e-109	51.8
WP_046132831.1\|2014918_2015758_+	thymidylate synthase	U5J9N5	Bacillus_phage	1.4e-53	42.0
WP_046132832.1\|2015946_2016312_+	hypothetical protein	A0A1P8CX43	Bacillus_phage	1.2e-17	45.3
WP_046132833.1\|2016547_2017030_+	hypothetical protein	A0A076G5S9	Staphylococcus_phage	4.3e-07	26.8
WP_157759332.1\|2017044_2017218_+	hypothetical protein	NA	NA	NA	NA
WP_023856099.1\|2017556_2017805_+	hypothetical protein	NA	NA	NA	NA
WP_046132834.1\|2017827_2018172_+	hypothetical protein	NA	NA	NA	NA
WP_052948584.1\|2018340_2018685_+	hypothetical protein	NA	NA	NA	NA
WP_046132835.1\|2018685_2019693_+	hypothetical protein	R4JEY6	Bacillus_phage	4.1e-44	38.2
WP_046132836.1\|2020022_2020223_-	alpha/beta-type small acid-soluble spore protein	Q77YX0	Bacillus_phage	3.7e-21	82.5
WP_065894518.1\|2020311_2020827_+	hypothetical protein	NA	NA	NA	NA
WP_046132838.1\|2020855_2021683_+	metallophosphoesterase	O64184	Bacillus_phage	1.6e-147	84.7
WP_046132839.1\|2021698_2022055_+	hypothetical protein	NA	NA	NA	NA
WP_065894743.1\|2022336_2022786_+	NADAR family protein	A0A172JI41	Bacillus_phage	4.4e-46	64.7
WP_046132843.1\|2022997_2023609_+	hypothetical protein	A0A1P8CX67	Bacillus_phage	1.1e-81	80.8

DBSCAN-SWA_11

2624274 : 2636533

Staphylococcus_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046129828.1\|2624274_2624739_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.0e-45	71.1
WP_046129827.1\|2624773_2625970_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	9.6e-117	54.2
WP_046129826.1\|2625989_2626637_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	3.7e-38	42.2
WP_046129825.1\|2626648_2627737_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	3.0e-56	38.9
WP_046129824.1\|2628105_2628450_-	hypothetical protein	NA	NA	NA	NA
WP_046129823.1\|2629046_2629343_+	helix-turn-helix domain containing protein	NA	NA	NA	NA
WP_099047054.1\|2629351_2629732_+\|transposase	IS3 family transposase	A0A0N9S8A3	Staphylococcus_phage	5.4e-05	31.6
WP_099047055.1\|2629713_2630232_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	5.4e-40	50.0
WP_046129822.1\|2630288_2630726_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_046129821.1\|2630857_2631106_-	hypothetical protein	NA	NA	NA	NA
WP_046129820.1\|2631095_2632226_-	tetratricopeptide repeat protein	A0A1P8CWN8	Bacillus_phage	3.6e-89	46.3
WP_046129819.1\|2632462_2632900_-	peptidylprolyl isomerase	A0A2H4UTF4	Bodo_saltans_virus	2.4e-17	45.5
WP_046129818.1\|2633180_2634077_+	DUF1002 domain-containing protein	NA	NA	NA	NA
WP_046129817.1\|2634131_2634935_-	poly-gamma-glutamate hydrolase family protein	O64134	Bacillus_phage	6.4e-56	51.1
WP_046129816.1\|2635102_2636533_-	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	3.7e-30	31.1

DBSCAN-SWA_12

3159710 : 3245001

uncultured_Caudovirales_phage(34.15%)

terminase,tail,tRNA,coat,holin,capsid,head,portal,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046132060.1\|3159710_3162353_-\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	9.8e-162	42.6
WP_082094150.1\|3162813_3163005_+	hypothetical protein	NA	NA	NA	NA
WP_046132058.1\|3163041_3164064_-\|coat	spore coat protein YsxE	NA	NA	NA	NA
WP_046132057.1\|3164080_3165586_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA
WP_046132056.1\|3165709_3167005_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA
WP_046132055.1\|3167031_3168006_-	porphobilinogen synthase	NA	NA	NA	NA
WP_046132054.1\|3168009_3168798_-	uroporphyrinogen-III synthase	NA	NA	NA	NA
WP_046132053.1\|3168787_3169729_-	hydroxymethylbilane synthase	NA	NA	NA	NA
WP_046132052.1\|3169764_3170595_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA
WP_046132051.1\|3170599_3171961_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_046132050.1\|3172146_3172632_+	hypothetical protein	NA	NA	NA	NA
WP_046132049.1\|3172679_3173267_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA
WP_046132048.1\|3173263_3175588_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	6.5e-186	45.2
WP_046132047.1\|3175791_3177447_-\|protease	ATP-dependent protease LonB	A0A0R6PGP8	Moraxella_phage	8.3e-18	36.6
WP_046132046.1\|3177573_3178839_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.9e-147	63.8
WP_046132045.1\|3179109_3180384_-	trigger factor	NA	NA	NA	NA
WP_046132044.1\|3180613_3181621_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_046132043.1\|3181744_3182344_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA
WP_046132042.1\|3182356_3183775_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA
WP_046132041.1\|3183808_3184921_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA
WP_046132040.1\|3184948_3186505_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	3.0e-09	26.5
WP_046132039.1\|3186491_3187520_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_046132038.1\|3187551_3188070_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_046132037.1\|3188066_3189791_-	acetolactate synthase large subunit	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	5.2e-63	30.2
WP_046132036.1\|3190197_3191112_-	branched-chain-amino-acid transaminase	NA	NA	NA	NA
WP_082094149.1\|3191569_3191857_+	hypothetical protein	NA	NA	NA	NA
WP_046132147.1\|3191876_3193226_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA
WP_046132034.1\|3194024_3194420_-	hypothetical protein	NA	NA	NA	NA
WP_046132146.1\|3195056_3195518_-	SMI1/KNR4 family protein	NA	NA	NA	NA
WP_046132003.1\|3198012_3198525_-	metallophosphoesterase	NA	NA	NA	NA
WP_046132002.1\|3198545_3199130_-	XTP/dITP diphosphatase	A0A2H4UUV7	Bodo_saltans_virus	5.4e-12	31.6
WP_046132001.1\|3199155_3199899_-	ribonuclease PH	NA	NA	NA	NA
WP_046132000.1\|3200021_3201131_-	sporulation protein	NA	NA	NA	NA
WP_082094146.1\|3201290_3202115_-	glutamate racemase	NA	NA	NA	NA
WP_046131998.1\|3202122_3202566_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_042631274.1\|3202728_3202803_-	hypothetical protein	NA	NA	NA	NA
WP_048354316.1\|3202849_3204373_-	recombinase family protein	A0A290FZV2	Caldibacillus_phage	7.1e-149	52.9
WP_065894759.1\|3204554_3204875_+	YolD-like family protein	O64030	Bacillus_phage	2.7e-10	34.0
WP_065894608.1\|3204898_3205360_-	hypothetical protein	NA	NA	NA	NA
WP_083217257.1\|3205366_3205774_-	SocA family protein	I6R0L8	Salmonella_phage	6.1e-23	45.6
WP_065894611.1\|3206321_3206552_+	hypothetical protein	NA	NA	NA	NA
WP_046131995.1\|3206576_3207158_-	hypothetical protein	NA	NA	NA	NA
WP_046131994.1\|3207322_3208405_-	N-acetylmuramoyl-L-alanine amidase	A0A1P8CWN6	Bacillus_phage	2.1e-46	54.1
WP_065894613.1\|3208456_3208720_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	5.1e-31	72.4
WP_065894615.1\|3208735_3209005_-	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	1.6e-24	62.9
WP_065894617.1\|3209090_3209357_-	hypothetical protein	NA	NA	NA	NA
WP_065894619.1\|3209371_3209557_-	hypothetical protein	NA	NA	NA	NA
WP_157759342.1\|3209556_3209703_-	hypothetical protein	NA	NA	NA	NA
WP_065894621.1\|3209686_3210073_-	hypothetical protein	NA	NA	NA	NA
WP_065894626.1\|3210093_3213489_-\|tail	phage tail protein	Q5YA57	Bacillus_phage	9.4e-133	45.3
WP_046131988.1\|3213501_3214266_-\|tail	phage tail family protein	A0A059T682	Listeria_phage	8.0e-08	27.3
WP_065894628.1\|3214262_3219143_-	hypothetical protein	Q4ZC60	Staphylococcus_virus	9.3e-33	26.3
WP_046131986.1\|3219158_3219455_-	hypothetical protein	NA	NA	NA	NA
WP_046131985.1\|3219502_3220015_-	phage protein	NA	NA	NA	NA
WP_082094145.1\|3220098_3220425_-	fibronectin type III domain-containing protein	R4JF61	Bacillus_phage	1.5e-24	67.5
WP_052948546.1\|3220354_3220873_-\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_065894630.1\|3220886_3221285_-	DUF3168 domain-containing protein	W8EK61	Geobacillus_phage	6.4e-25	45.4
WP_065894632.1\|3221300_3221720_-	HK97 gp10 family phage protein	O48447	Bacillus_phage	9.4e-35	59.1
WP_065894634.1\|3221712_3222057_-\|head	phage head closure protein	NA	NA	NA	NA
WP_065894636.1\|3222056_3222365_-	hypothetical protein	A0A1W6JQJ1	Staphylococcus_phage	5.7e-13	40.2
WP_065894638.1\|3222377_3222650_-	hypothetical protein	NA	NA	NA	NA
WP_065894640.1\|3222651_3222990_-	hypothetical protein	NA	NA	NA	NA
WP_065894643.1\|3222993_3223914_-\|capsid	phage major capsid protein	A0A2H4JCG0	uncultured_Caudovirales_phage	9.1e-107	64.0
WP_065894644.1\|3223929_3224511_-	DUF4355 domain-containing protein	A0A2H4J4P4	uncultured_Caudovirales_phage	2.2e-50	56.0
WP_157759343.1\|3224621_3224780_-	hypothetical protein	NA	NA	NA	NA
WP_046131976.1\|3224908_3225232_-	hypothetical protein	NA	NA	NA	NA
WP_164918166.1\|3225224_3225380_-	hypothetical protein	NA	NA	NA	NA
WP_065894646.1\|3225381_3226305_-\|head	phage head morphogenesis protein	A0A1Q1PVS0	Bacillus_phage	3.0e-81	51.5
WP_065894648.1\|3226291_3227686_-\|portal	phage portal protein	A0A2H4J4Q7	uncultured_Caudovirales_phage	6.5e-149	59.7
WP_065894650.1\|3227682_3228960_-\|terminase	PBSX family phage terminase large subunit	A0A2P1JTW5	Anoxybacillus_phage	1.2e-154	70.0
WP_065894652.1\|3228956_3229706_-	hypothetical protein	A0A2P1JTW4	Anoxybacillus_phage	4.0e-60	53.8
WP_065894654.1\|3230110_3230566_-	sigma-70 family RNA polymerase sigma factor	A0A2H4J4R7	uncultured_Caudovirales_phage	3.4e-62	78.1
WP_065894656.1\|3231012_3231822_-	DNA adenine methylase	U5P0W8	Brevibacillus_phage	1.8e-90	59.4
WP_065894658.1\|3231803_3232820_-	DNA (cytosine-5-)-methyltransferase	A8YQM6	Lactobacillus_phage	3.6e-64	44.5
WP_065894660.1\|3232824_3233076_-	hypothetical protein	NA	NA	NA	NA
WP_065894665.1\|3233072_3233390_-	hypothetical protein	NA	NA	NA	NA
WP_065894667.1\|3233386_3233788_-	hypothetical protein	S5MUL4	Brevibacillus_phage	4.0e-27	47.1
WP_048355005.1\|3233784_3234231_-	phage YopX like protein	A0A1B1P7V7	Bacillus_phage	8.0e-08	37.4
WP_048355006.1\|3234265_3234472_-	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	5.3e-15	60.0
WP_167543086.1\|3234547_3234712_-	hypothetical protein	A0A2H4J4N7	uncultured_Caudovirales_phage	3.7e-11	64.4
WP_046131957.1\|3234831_3235290_-	DUF1064 domain-containing protein	A0A2H4J891	uncultured_Caudovirales_phage	7.8e-51	70.0
WP_164918168.1\|3235383_3235527_-	hypothetical protein	NA	NA	NA	NA
WP_052948543.1\|3235539_3236322_-	ATP-binding protein	A0A2H4J4P8	uncultured_Caudovirales_phage	1.2e-102	70.4
WP_046131956.1\|3237450_3238302_-	recombinase RecT	A0A2H4JCY8	uncultured_Caudovirales_phage	2.3e-120	78.9
WP_046131955.1\|3238303_3239254_-	YqaJ viral recombinase family protein	A0A2H4JA52	uncultured_Caudovirales_phage	6.0e-138	76.5
WP_046131954.1\|3239253_3239442_-	hypothetical protein	NA	NA	NA	NA
WP_046131953.1\|3239434_3239629_-	hypothetical protein	NA	NA	NA	NA
WP_046131952.1\|3240171_3240429_-	hypothetical protein	NA	NA	NA	NA
WP_046131951.1\|3240430_3240994_-	helix-turn-helix domain-containing protein	A0A2H4J884	uncultured_Caudovirales_phage	8.7e-60	54.0
WP_046131950.1\|3241060_3241750_-	antirepressor	A0A1B1IMQ3	Lactococcus_phage	1.9e-32	45.8
WP_164918169.1\|3241802_3241943_-	hypothetical protein	NA	NA	NA	NA
WP_046131949.1\|3242066_3242378_+	hypothetical protein	NA	NA	NA	NA
WP_095267021.1\|3242374_3242515_-	hypothetical protein	NA	NA	NA	NA
WP_011197841.1\|3242525_3242762_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046131948.1\|3242896_3243265_+	helix-turn-helix transcriptional regulator	A0A0B5CYL9	Listeria_phage	1.3e-11	35.6
WP_046131947.1\|3243528_3243810_+	hypothetical protein	NA	NA	NA	NA
WP_046131946.1\|3243903_3244425_+	hypothetical protein	NA	NA	NA	NA
WP_046131945.1\|3244524_3245001_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.9e-29	40.9

DBSCAN-SWA_13

3372402 : 3385820

Bacillus_phage(81.82%)

plate,holin,transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_046130835.1\|3372402_3372726_+	YolD-like family protein	O64030	Bacillus_phage	1.7e-07	29.4
WP_046130817.1\|3373139_3373850_-	DUF421 domain-containing protein	NA	NA	NA	NA
WP_046130816.1\|3374054_3374906_+	DUF2202 domain-containing protein	NA	NA	NA	NA
WP_046130815.1\|3375059_3375653_+	cupin domain-containing protein	Q2I8C5	Bacillus_phage	6.4e-53	67.6
WP_046130814.1\|3375773_3376715_-	LysM peptidoglycan-binding domain-containing protein	A0A141HSE6	Bacillus_phage	6.5e-60	42.3
WP_046130813.1\|3376762_3377173_-\|holin	phage holin family protein	A0A0N7GFE6	Paenibacillus_phage	1.1e-24	50.8
WP_099047033.1\|3377246_3378607_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.9e-108	72.5
WP_046131116.1\|3378639_3378837_-	XkdX family protein	A0EWM9	Staphylococcus_virus	7.3e-06	45.8
WP_046131115.1\|3378833_3379136_-	phage protein	O64053	Bacillus_phage	7.8e-07	33.9
WP_046131114.1\|3379150_3380647_-\|plate	BppU family phage baseplate upper protein	D6R402	Bacillus_phage	1.5e-63	64.6
WP_046131113.1\|3380659_3383224_-	peptidase G2	D6R401	Bacillus_phage	7.1e-311	61.0
WP_065894673.1\|3383258_3384971_-	alkaline phosphatase	D6R400	Bacillus_phage	1.3e-223	67.7
WP_046131112.1\|3384983_3385820_-\|tail	phage tail family protein	D6R3Z9	Bacillus_phage	2.2e-107	67.9

DBSCAN-SWA_14

3840380 : 3890484

Bacillus_phage(38.46%)

terminase,tail,plate,holin,capsid,head,portal,transposase,protease,integrase

attL 3838312:3838331|attR 3875305:3875324

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3838312:3838331	attL	NA	NA	NA	NA
WP_046129175.1\|3840380_3841460_-	N-acetylmuramoyl-L-alanine amidase	S6BFI4	Thermus_phage	2.1e-46	49.8
WP_046129174.1\|3841511_3841775_-\|holin	phage holin	A0A2H4J6M0	uncultured_Caudovirales_phage	3.0e-31	74.7
WP_046129173.1\|3841790_3842060_-	hemolysin XhlA family protein	A0A2H4JD40	uncultured_Caudovirales_phage	1.7e-21	60.7
WP_082094024.1\|3842134_3843745_-\|plate	BppU family phage baseplate upper protein	D6R402	Bacillus_phage	2.5e-59	58.2
WP_046129171.1\|3843760_3846328_-	peptidase G2	D6R401	Bacillus_phage	5.4e-298	58.9
WP_046129170.1\|3846346_3848233_-	autolysin	D6R400	Bacillus_phage	2.7e-65	30.6
WP_046129169.1\|3848247_3849075_-\|tail	phage tail family protein	M4ZS20	Bacillus_phage	1.5e-39	37.5
WP_167543089.1\|3849071_3852248_-	transglycosylase SLT domain-containing protein	A0A1L2JY60	Aeribacillus_phage	8.4e-67	44.1
WP_043054118.1\|3853594_3853957_-	hypothetical protein	NA	NA	NA	NA
WP_046129168.1\|3853956_3854589_-	hypothetical protein	A0A2H4J8F3	uncultured_Caudovirales_phage	7.6e-20	33.2
WP_046129167.1\|3854588_3854969_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_052948491.1\|3854965_3855379_-	hypothetical protein	NA	NA	NA	NA
WP_128748282.1\|3855356_3855719_-\|head	phage head closure protein	A0A1W6JP44	Morganella_phage	4.6e-06	34.7
WP_099047123.1\|3855675_3855957_-\|head,tail	phage gp6-like head-tail connector protein	A0A1C8E967	Bacillus_phage	3.8e-16	46.0
WP_046129164.1\|3855943_3857245_-\|capsid	phage major capsid protein	A0A1C8E976	Bacillus_phage	7.1e-89	54.2
WP_046129163.1\|3857241_3857832_-\|head,protease	HK97 family phage prohead protease	A0A1B2APW1	Phage_Wrath	2.4e-52	56.4
WP_046129162.1\|3857824_3859003_-\|portal	phage portal protein	A0A2H4J9C7	uncultured_Caudovirales_phage	2.3e-107	53.4
WP_046129264.1\|3859015_3860722_-\|terminase	terminase large subunit	A0A1B0T685	Bacillus_phage	1.6e-189	56.7
WP_043054550.1\|3860766_3861171_-	hypothetical protein	A0A1C8E969	Bacillus_phage	9.4e-24	44.9
WP_046129161.1\|3861248_3861620_-	HNH endonuclease	NA	NA	NA	NA
WP_046129160.1\|3861616_3861826_-	hypothetical protein	NA	NA	NA	NA
WP_046129159.1\|3862131_3862761_-	hypothetical protein	NA	NA	NA	NA
WP_046129158.1\|3862748_3862994_-	hypothetical protein	NA	NA	NA	NA
WP_046129157.1\|3862996_3863221_-	hypothetical protein	NA	NA	NA	NA
WP_043054107.1\|3863582_3863765_+	type II toxin-antitoxin system HicA family toxin	D6R431	Bacillus_phage	1.7e-25	90.0
WP_046129156.1\|3863813_3864230_+	pilus assembly protein HicB	D6R430	Bacillus_phage	3.8e-68	88.3
WP_164918132.1\|3864359_3864515_-	hypothetical protein	NA	NA	NA	NA
WP_046129154.1\|3864734_3865277_-\|integrase	site-specific integrase	D2XR58	Bacillus_phage	2.5e-56	61.1
WP_046129153.1\|3865276_3865717_-	ArpU family transcriptional regulator	S6AVV9	Thermus_phage	1.5e-35	50.4
WP_046129152.1\|3866143_3866953_-	DNA adenine methylase	U5P0W8	Brevibacillus_phage	1.2e-89	59.1
WP_046129151.1\|3867026_3867278_-	hypothetical protein	NA	NA	NA	NA
WP_046129150.1\|3867274_3867508_-	hypothetical protein	NA	NA	NA	NA
WP_046129149.1\|3867542_3867749_-	hypothetical protein	A0A2H4J4M6	uncultured_Caudovirales_phage	1.4e-07	47.6
WP_128748284.1\|3867821_3867971_-	BH0509 family protein	NA	NA	NA	NA
WP_046129148.1\|3868075_3868624_-	hypothetical protein	NA	NA	NA	NA
WP_017475015.1\|3868775_3868934_-	hypothetical protein	NA	NA	NA	NA
WP_046129263.1\|3868947_3869781_-	ATP-binding protein	Q2I8C8	Bacillus_phage	6.4e-35	37.4
WP_046129147.1\|3869764_3870622_-	DNA damage-inducible protein DnaD	A0A0U3TZZ4	Bacillus_phage	7.8e-60	52.3
WP_046129146.1\|3870614_3870845_-	hypothetical protein	NA	NA	NA	NA
WP_052948490.1\|3870897_3871296_+	hypothetical protein	R9VW35	Paenibacillus_phage	7.4e-05	34.6
WP_046129145.1\|3871282_3871558_-	hypothetical protein	NA	NA	NA	NA
WP_046129144.1\|3871559_3871805_-	hypothetical protein	NA	NA	NA	NA
WP_046129143.1\|3871875_3872646_-	antirepressor	A0A290FZK7	Caldibacillus_phage	4.9e-106	73.5
WP_046129142.1\|3872642_3872849_-	helix-turn-helix transcriptional regulator	A0A1B2APY7	Phage_Wrath	2.1e-11	56.7
WP_046129141.1\|3872885_3873077_-	helix-turn-helix transcriptional regulator	A0A2P1JU05	Anoxybacillus_phage	1.3e-12	55.7
WP_052948489.1\|3873236_3873653_+	helix-turn-helix transcriptional regulator	A0A2P1JU09	Anoxybacillus_phage	4.5e-29	55.5
WP_046129139.1\|3873675_3874119_+	ImmA/IrrE family metallo-endopeptidase	Q9T201	Bacillus_phage	4.2e-49	62.8
WP_046129138.1\|3874167_3875232_+\|integrase	site-specific integrase	A0A1B2AQ00	Phage_Wrath	2.0e-134	64.3
WP_046129137.1\|3875777_3876251_-	SsrA-binding protein	W5RAM5	Staphylococcus_phage	3.5e-46	62.5
3875305:3875324	attR	NA	NA	NA	NA
WP_046129136.1\|3876363_3878667_-	ribonuclease R	Q0GXV6	Lactococcus_phage	4.5e-94	41.4
WP_046129135.1\|3878680_3879427_-	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_046129134.1\|3879544_3879775_-	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_046129133.1\|3879934_3880219_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	3.2e-10	50.0
WP_096892181.1\|3880247_3880433_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_046129131.1\|3880633_3881038_+	transcriptional regulator	S6C481	Thermus_phage	7.7e-18	65.3
WP_046129130.1\|3881194_3881593_+	helix-turn-helix transcriptional regulator	S6C481	Thermus_phage	4.6e-15	60.3
WP_046129261.1\|3881639_3882317_-	ABC transporter permease	NA	NA	NA	NA
WP_046129129.1\|3882337_3883255_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_046129128.1\|3883268_3883922_-	ABC transporter permease	NA	NA	NA	NA
WP_046129127.1\|3883934_3885077_-\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	2.3e-14	31.1
WP_046129126.1\|3885336_3885873_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA
WP_099047013.1\|3885923_3887284_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-108	72.8
WP_046132922.1\|3887357_3887990_-	NAAT family transporter	NA	NA	NA	NA
WP_046132923.1\|3888138_3888918_+	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_065894138.1\|3889053_3890484_+\|transposase	IS1182 family transposase	A0A1X9I5T2	Streptococcus_phage	5.3e-122	50.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage