CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT604075	Ligilactobacillus salivarius isolate LPM01 plasmid II	0 crisprs	c2c10_CAS-V-U3,cas14j	0	0	2	0
NZ_LT604074	Ligilactobacillus salivarius isolate LPM01 chromosome I	0 crisprs	DEDDh,cas3,WYL,csa3,DinG	0	0	9	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

52302 : 101971

Paenibacillus_phage(20.0%)

integrase,bacteriocin,transposase

attL 82114:82130|attR 104901:104917

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_157663096.1\|52302_53151_-\|transposase	IS30 family transposase	H7BWC8	unidentified_phage	4.9e-22	31.8
WP_087118739.1\|53293_53980_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.4e-32	38.1
WP_157663097.1\|54059_54875_+\|transposase	IS3 family transposase	A0A0C5AC89	Paenibacillus_phage	1.8e-53	47.2
WP_087118741.1\|55150_55468_-	glutaredoxin family protein	NA	NA	NA	NA
WP_087118742.1\|56201_56867_+	DUF3800 domain-containing protein	NA	NA	NA	NA
WP_087118743.1\|57204_57420_-	hypothetical protein	NA	NA	NA	NA
WP_087118744.1\|57412_57613_-	hypothetical protein	NA	NA	NA	NA
WP_087118745.1\|57652_58654_-	hypothetical protein	NA	NA	NA	NA
WP_087118746.1\|58650_59145_-	thioredoxin fold domain-containing protein	NA	NA	NA	NA
WP_003699162.1\|59157_59370_-	hypothetical protein	NA	NA	NA	NA
WP_003699163.1\|59323_59731_-	hypothetical protein	NA	NA	NA	NA
WP_087118747.1\|59743_60859_-	hypothetical protein	NA	NA	NA	NA
WP_087118748.1\|60872_61886_-	replication initiator protein A	NA	NA	NA	NA
WP_157663098.1\|62341_62494_-	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_003708474.1\|62627_62792_+	Arc family DNA-binding protein	A0A0A8WG21	Clostridium_phage	3.4e-09	54.7
WP_087118750.1\|63061_63262_-	DNA-binding protein	A0A286QQ20	Streptococcus_phage	9.7e-06	46.7
WP_087118751.1\|63468_63891_+	helix-turn-helix transcriptional regulator	F0PIH1	Enterococcus_phage	6.2e-10	41.4
WP_087118752.1\|64612_65383_-	Fic family protein	NA	NA	NA	NA
WP_087118753.1\|65645_65999_+	hypothetical protein	NA	NA	NA	NA
WP_003702995.1\|66588_66891_+	hypothetical protein	NA	NA	NA	NA
WP_003699488.1\|67146_68025_+	patatin family protein	NA	NA	NA	NA
WP_003699487.1\|68110_68947_-	pyruvate formate lyase-activating protein	NA	NA	NA	NA
WP_087118754.1\|68973_71241_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	3.1e-172	42.2
WP_081036621.1\|71551_72136_-	VIT1/CCC1 transporter family protein	NA	NA	NA	NA
WP_174633258.1\|72328_73753_-	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_003706789.1\|73724_74174_-	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_172824500.1\|74170_75397_-	SufS family cysteine desulfurase	Q2XUY6	environmental_halophage	3.4e-109	46.9
WP_087118756.1\|75383_76634_-	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_081531057.1\|76646_77426_-	Fe-S cluster assembly ATPase SufC	A0A285PWH2	Cedratvirus	3.3e-09	28.7
WP_087118757.1\|77687_79322_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_086201697.1\|81120_81393_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
82114:82130	attL	NA	NA	NA	NA
WP_004564415.1\|82232_83282_-	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_004564416.1\|83488_84484_+	D-2-hydroxyacid dehydrogenase	M1H502	Paramecium_bursaria_Chlorella_virus	1.4e-44	38.1
WP_087118758.1\|84925_85135_-	hypothetical protein	NA	NA	NA	NA
WP_034982128.1\|85157_85391_-	hypothetical protein	NA	NA	NA	NA
WP_003708516.1\|85425_85611_-	hypothetical protein	NA	NA	NA	NA
WP_087118759.1\|85625_86090_-	hypothetical protein	NA	NA	NA	NA
WP_087118760.1\|86160_86583_-	phage scaffolding protein	NA	NA	NA	NA
WP_087118761.1\|86681_86849_-	hypothetical protein	NA	NA	NA	NA
WP_081535599.1\|86841_87084_-	hypothetical protein	NA	NA	NA	NA
WP_087118762.1\|88104_89001_-	nitronate monooxygenase	NA	NA	NA	NA
WP_011476657.1\|89105_91763_-	bifunctional acetaldehyde-CoA/alcohol dehydrogenase	NA	NA	NA	NA
WP_087118763.1\|92606_93266_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_087118764.1\|93328_95299_-	fructose-1,6-bisphosphatase	NA	NA	NA	NA
WP_087118765.1\|95643_96465_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_087118766.1\|97064_97808_-	hypothetical protein	NA	NA	NA	NA
WP_087118767.1\|98152_98350_-	hypothetical protein	NA	NA	NA	NA
WP_172824496.1\|98642_98873_-	hypothetical protein	NA	NA	NA	NA
WP_081535612.1\|98909_99704_-	response regulator transcription factor	NA	NA	NA	NA
WP_087118769.1\|99717_101007_-	GHKL domain-containing protein	NA	NA	NA	NA
WP_003703471.1\|101006_101123_-\|bacteriocin	bacteriocin	NA	NA	NA	NA
WP_081510153.1\|101242_101410_-	ABC transporter permease	NA	NA	NA	NA
WP_003703485.1\|101552_101759_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
WP_003703435.1\|101776_101971_-\|bacteriocin	Blp family class II bacteriocin	NA	NA	NA	NA
104901:104917	attR	NA	NA	NA	NA

DBSCAN-SWA_2

173801 : 220651

Streptococcus_phage(36.36%)

integrase,tRNA,transposase

attL 209614:209630|attR 225934:225950

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087118795.1\|173801_175202_+\|tRNA	L-seryl-tRNA(Sec) selenium transferase	NA	NA	NA	NA
WP_099450961.1\|175207_175537_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA
WP_081511023.1\|175648_176959_+	proline reductase-associated electron transfer protein PrdC	NA	NA	NA	NA
WP_081512927.1\|176994_178026_+	selenide, water dikinase SelD	NA	NA	NA	NA
WP_087118796.1\|178125_179298_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA
WP_003702854.1\|179316_179562_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA
WP_087118797.1\|179809_180037_+	hypothetical protein	NA	NA	NA	NA
WP_087118798.1\|180164_180455_+\|transposase	transposase	NA	NA	NA	NA
WP_087118799.1\|180489_181170_+\|transposase	transposase	NA	NA	NA	NA
WP_087118800.1\|181367_183083_-	hypothetical protein	NA	NA	NA	NA
WP_157663102.1\|183294_184278_+	hypothetical protein	NA	NA	NA	NA
WP_087118801.1\|184444_185371_-\|integrase	site-specific integrase	A8ATM2	Listeria_phage	2.0e-77	45.7
WP_087118802.1\|185584_186142_+	restriction endonuclease subunit S	NA	NA	NA	NA
WP_087118803.1\|186143_187532_+	N-6 DNA methylase	A0A1X9I6H1	Streptococcus_phage	4.1e-26	28.3
WP_044005693.1\|187550_187793_+	hypothetical protein	NA	NA	NA	NA
WP_087118804.1\|187943_189908_+	hypothetical protein	NA	NA	NA	NA
WP_087118805.1\|189894_190758_+	hypothetical protein	NA	NA	NA	NA
WP_172399966.1\|190741_191545_+	hypothetical protein	NA	NA	NA	NA
WP_087118806.1\|194300_196259_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA
WP_087118807.1\|196251_197454_+	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_087118808.1\|197521_198700_+	DUF951 domain-containing protein	NA	NA	NA	NA
WP_087118843.1\|199022_201080_+	hypothetical protein	NA	NA	NA	NA
WP_087118809.1\|201076_201640_+	hypothetical protein	NA	NA	NA	NA
WP_087118810.1\|203330_204434_-	alanine dehydrogenase	NA	NA	NA	NA
WP_035149309.1\|204823_205591_-	epoxyqueuosine reductase QueH	NA	NA	NA	NA
WP_081512964.1\|205654_206164_-	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_087118811.1\|206312_207155_+	DegV family protein	A0A1X9I5J4	Streptococcus_phage	1.3e-43	36.1
WP_081512965.1\|207342_207777_+	N-acetyltransferase	A0A1X9I6I8	Streptococcus_phage	5.3e-33	48.6
WP_087118812.1\|207849_208803_+	hypothetical protein	NA	NA	NA	NA
WP_003699254.1\|208869_209145_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	4.1e-23	62.9
WP_087118813.1\|209417_214010_+	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	5.2e-17	31.2
209614:209630	attL	NA	NA	NA	NA
WP_003703258.1\|214139_214499_+	hypothetical protein	NA	NA	NA	NA
WP_003706971.1\|214514_215327_+	SPFH domain-containing protein	S4VT23	Pandoravirus	1.1e-15	29.7
WP_087118814.1\|215661_216357_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_003703269.1\|216514_216946_-\|transposase	IS200/IS605 family transposase	A0A0P0IQC6	Lactobacillus_phage	2.3e-28	46.5
WP_087118815.1\|217045_218323_+\|transposase	transposase	A0A286QQE5	Streptococcus_phage	1.5e-54	35.9
WP_003699242.1\|218663_219236_+	DNA starvation/stationary phase protection protein	A0A0A7RTZ1	Clostridium_phage	6.6e-23	42.6
WP_087118816.1\|219380_220085_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_157663103.1\|220279_220651_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0C5AEA5	Paenibacillus_phage	4.0e-29	52.1
225934:225950	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_LT604074

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

315985 : 325005

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003700662.1\|315985_316978_-	DNA polymerase III subunit delta'	M1NSC1	Streptococcus_phage	2.6e-35	30.9
WP_003700663.1\|317012_317639_-	dTMP kinase	M1PSC7	Streptococcus_phage	6.9e-50	51.0
WP_011476227.1\|317758_317998_-	YaaL family protein	NA	NA	NA	NA
WP_003700665.1\|318011_318611_-	recombination protein RecR	NA	NA	NA	NA
WP_003700666.1\|318637_318952_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_087118361.1\|318969_320709_-	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	5.1e-58	38.9
WP_050754573.1\|320914_321382_-	nucleoside deaminase	NA	NA	NA	NA
WP_003700669.1\|321428_322040_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_081512492.1\|322242_322473_+	glutaredoxin-like protein NrdH	X2KRY7	Enterococcus_phage	2.7e-12	40.3
WP_003700671.1\|322469_322853_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	5.8e-15	38.7
WP_003700672.1\|322833_325005_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A8E2R1	Enterococcus_phage	3.5e-266	63.9

DBSCAN-SWA_2

581973 : 586026

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081513994.1\|581973_582732_-	3-oxoacyl-ACP reductase	Q06VL0	Trichoplusia_ni_ascovirus	4.1e-12	30.2
WP_003701248.1\|582731_582959_-	DUF2829 domain-containing protein	G3MBC9	Bacillus_virus	2.2e-06	37.0
WP_011476359.1\|582972_583470_-	QueT transporter family protein	E7DN70	Pneumococcus_phage	1.3e-14	36.7
WP_011476360.1\|583970_584843_-	DegV family protein	NA	NA	NA	NA
WP_011476361.1\|584914_585259_-	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	5.6e-09	37.1
WP_011476362.1\|585255_585645_-	CrcB family protein	A0A2H4PQR0	Staphylococcus_phage	1.5e-05	34.2
WP_011476363.1\|585702_586026_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	9.5e-19	38.4

DBSCAN-SWA_3

665962 : 726669

Bacillus_phage(19.05%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087118312.1\|665962_666481_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_157663091.1\|666477_667380_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8
WP_172824490.1\|667717_669259_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	1.5e-16	29.2
WP_011476408.1\|669370_670291_-	type I pantothenate kinase	A0A1B1ISL9	uncultured_Mediterranean_phage	4.8e-31	34.1
WP_003701150.1\|670397_670994_+	lipase	NA	NA	NA	NA
WP_172824491.1\|671069_671795_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	9.9e-32	37.8
WP_011476410.1\|671802_673302_-	ABC transporter substrate-binding protein/permease	NA	NA	NA	NA
WP_087118416.1\|673531_675022_-	glutamate/gamma-aminobutyrate family transporter YjeM	NA	NA	NA	NA
WP_003705442.1\|675304_675628_+	MazG-like family protein	NA	NA	NA	NA
WP_087118417.1\|675631_676804_+	MFS transporter	NA	NA	NA	NA
WP_011476413.1\|676873_677521_-	hypothetical protein	NA	NA	NA	NA
WP_087118418.1\|677553_680514_-	KxYKxGKxW signal peptide domain-containing protein	Q6SEC2	Lactobacillus_prophage	1.3e-40	60.0
WP_087118419.1\|680729_682160_-	flippase	NA	NA	NA	NA
WP_049165302.1\|682162_683278_-	UDP-galactopyranose mutase	E4ZFQ1	Streptococcus_phage	1.6e-174	81.1
WP_081561660.1\|683447_684329_+	glycosyltransferase	NA	NA	NA	NA
WP_087118420.1\|684357_685023_-	sugar transferase	NA	NA	NA	NA
WP_087118421.1\|685102_686074_-	LCP family protein	NA	NA	NA	NA
WP_087118422.1\|686093_686870_-	tyrosine protein phosphatase	NA	NA	NA	NA
WP_011476420.1\|687221_687947_-	CpsD/CapB family tyrosine-protein kinase	A0A1X9I5D6	Streptococcus_phage	1.9e-27	36.8
WP_011476421.1\|687964_688762_-	chain-length determining protein	NA	NA	NA	NA
WP_049154406.1\|688812_689265_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	3.9e-18	40.0
WP_087118423.1\|689489_690311_-	LicD family protein	A0A1V0SAS8	Catovirus	1.1e-05	28.6
WP_087118424.1\|690331_691561_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_011476423.1\|691596_692820_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_011476424.1\|692839_694015_-	EpsG family protein	NA	NA	NA	NA
WP_161799666.1\|694034_694976_-	capsular biosynthesis protein	A0A0E3FQH0	Synechococcus_phage	2.7e-13	31.6
WP_011476426.1\|694932_696045_-	glycosyltransferase family 1 protein	NA	NA	NA	NA
WP_014568758.1\|696047_697103_-	glycosyltransferase family 2 protein	L7Y3U4	Megavirus	1.9e-07	22.8
WP_172824469.1\|697130_698213_-	glycosyltransferase	NA	NA	NA	NA
WP_011476431.1\|700509_702549_-	ATP-dependent endonuclease	NA	NA	NA	NA
WP_011476432.1\|702742_704140_-	zinc-ribbon domain-containing protein	NA	NA	NA	NA
WP_011476433.1\|704164_705001_-	zinc ribbon domain-containing protein	NA	NA	NA	NA
WP_087118426.1\|705061_706165_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA
WP_011476435.1\|706383_707220_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	5.6e-39	39.9
WP_087118427.1\|707275_708307_-	dTDP-glucose 4,6-dehydratase	H9NC62	Sphingomonas_phage	1.5e-54	37.5
WP_003701105.1\|708318_708900_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A218MN57	uncultured_virus	3.0e-31	43.5
WP_011476438.1\|708902_709772_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	5.6e-106	63.7
WP_087118428.1\|709897_710899_-	glycosyltransferase	NA	NA	NA	NA
WP_011476440.1\|710980_711793_-	DUF4422 domain-containing protein	NA	NA	NA	NA
WP_011476441.1\|712025_712667_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_011476442.1\|712701_713346_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	1.2e-49	49.8
WP_003701095.1\|713361_714027_-	HAD family phosphatase	NA	NA	NA	NA
WP_034982328.1\|714116_715472_-	multidrug efflux MFS transporter	NA	NA	NA	NA
WP_003701093.1\|715643_715808_+	hypothetical protein	NA	NA	NA	NA
WP_087118429.1\|715886_716543_+	HD domain-containing protein	A0A142CJL7	Brazilian_marseillevirus	5.4e-13	32.1
WP_087118430.1\|716610_717000_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_086200906.1\|717045_717849_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_081561682.1\|717884_718679_-	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_011476449.1\|718748_719291_-	folate family ECF transporter S component	NA	NA	NA	NA
WP_003705492.1\|719530_720331_-	metal ABC transporter permease	NA	NA	NA	NA
WP_086200905.1\|720323_720992_-	ATP-binding cassette domain-containing protein	A0A1B0RXA0	Streptococcus_phage	4.7e-12	29.2
WP_003704329.1\|720994_721861_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_086200904.1\|722093_722975_-	hypothetical protein	NA	NA	NA	NA
WP_157663091.1\|723382_724285_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8
WP_087118312.1\|724281_724800_-\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_086200924.1\|725004_725691_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_157663088.1\|725789_726449_-	hypothetical protein	NA	NA	NA	NA
WP_157663089.1\|726519_726669_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_4

735868 : 746679

Bacillus_phage(60.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087118433.1\|735868_738514_-	HAD-IC family P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	2.7e-63	27.8
WP_087118434.1\|738772_739309_+	TIGR00730 family Rossman fold protein	A0A2I2L3F0	Orpheovirus	6.2e-15	28.2
WP_087118312.1\|739390_739909_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_157663091.1\|739905_740808_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8
WP_003704336.1\|740881_741451_-	DJ-1/PfpI family protein	NA	NA	NA	NA
WP_011476464.1\|741452_742082_-	hypothetical protein	NA	NA	NA	NA
WP_087118435.1\|742215_742884_-	class A sortase	NA	NA	NA	NA
WP_087118436.1\|742932_746679_-	helicase-exonuclease AddAB subunit AddA	A7KV33	Bacillus_phage	3.7e-05	32.2

DBSCAN-SWA_5

898086 : 907970

Bacillus_phage(33.33%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003701429.1\|898086_898950_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	7.2e-21	26.8
WP_087118493.1\|899095_900109_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_049164330.1\|900334_901117_+	M23 family metallopeptidase	A0A7K9	Microcystis_virus	3.5e-06	37.5
WP_087118494.1\|901356_903279_+	asparagine synthase (glutamine-hydrolyzing)	A0A2K9L187	Tupanvirus	1.5e-26	26.9
WP_049154206.1\|903379_903955_+	DUF1211 domain-containing protein	NA	NA	NA	NA
WP_003701438.1\|904130_904508_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_087118312.1\|904602_905121_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_157663091.1\|905117_906020_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8
WP_003701439.1\|906083_907970_-	pyruvate oxidase	A0A0P0BWC8	Ostreococcus_mediterraneus_virus	1.5e-10	22.3

DBSCAN-SWA_6

1155257 : 1231517

Lactobacillus_phage(41.03%)

portal,capsid,terminase,tRNA,integrase,tail,protease,transposase,head,plate

attL 1165047:1165068|attR 1206517:1206538

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014568129.1\|1155257_1157285_+\|tRNA	methionine--tRNA ligase	A0A1V0SHR2	Klosneuvirus	1.4e-99	38.3
WP_081511685.1\|1157418_1158189_+	TatD family hydrolase	NA	NA	NA	NA
WP_087118715.1\|1158199_1158757_+	ribonuclease M5	NA	NA	NA	NA
WP_081511687.1\|1158768_1159659_+	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_003702215.1\|1159746_1159980_+	Veg family protein	NA	NA	NA	NA
WP_087118538.1\|1160075_1160924_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_081511691.1\|1160936_1162055_+	aminotransferase	NA	NA	NA	NA
WP_003702207.1\|1162098_1162569_+	arginine repressor	NA	NA	NA	NA
WP_011475606.1\|1162607_1163477_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_014568135.1\|1163692_1165000_+	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	1.2e-38	33.3
1165047:1165068	attL	NA	NA	NA	NA
WP_087118539.1\|1165211_1166357_-\|integrase	site-specific integrase	A0A2P0ZL94	Lactobacillus_phage	1.2e-44	35.1
WP_087118540.1\|1166623_1167523_-	Abi family protein	NA	NA	NA	NA
WP_081561349.1\|1167624_1167819_+	hypothetical protein	NA	NA	NA	NA
WP_087118541.1\|1167806_1168652_-	hypothetical protein	NA	NA	NA	NA
WP_081537376.1\|1168904_1169231_-	hypothetical protein	NA	NA	NA	NA
WP_160993459.1\|1169891_1170356_+	hypothetical protein	NA	NA	NA	NA
WP_047035113.1\|1170608_1171550_-	3'-5' exoribonuclease	A0A1S5SFA9	Streptococcus_phage	5.7e-48	37.8
WP_047035114.1\|1171552_1171882_-	hypothetical protein	NA	NA	NA	NA
WP_052757118.1\|1171904_1172330_-	ImmA/IrrE family metallo-endopeptidase	A0A2P1JU12	Anoxybacillus_phage	1.6e-10	31.8
WP_047035115.1\|1172341_1172737_-	helix-turn-helix transcriptional regulator	A0A0M4QX29	Bacillus_phage	6.2e-20	41.5
WP_047035116.1\|1172976_1173165_+	helix-turn-helix transcriptional regulator	D2IZW2	Enterococcus_phage	2.0e-05	50.0
WP_087118542.1\|1173168_1174137_+	Rha family transcriptional regulator	A0A0A7DN29	Lactobacillus_phage	2.2e-50	57.8
WP_087118543.1\|1174157_1174424_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_087118544.1\|1174661_1174841_+	hypothetical protein	NA	NA	NA	NA
WP_087118546.1\|1175115_1175334_+	hypothetical protein	NA	NA	NA	NA
WP_087118547.1\|1175326_1176040_+	hypothetical protein	D7RWH3	Brochothrix_phage	2.6e-29	40.4
WP_087118548.1\|1176032_1177016_+	phage replisome organizer N-terminal domain-containing protein	A0A1S5SAV1	Streptococcus_phage	4.0e-28	48.6
WP_011475628.1\|1177012_1177216_+	hypothetical protein	NA	NA	NA	NA
WP_003703552.1\|1177219_1177486_+	hypothetical protein	NA	NA	NA	NA
WP_003703564.1\|1177466_1177883_+	replication terminator protein	A0A097BY30	Enterococcus_phage	5.1e-25	46.8
WP_003703548.1\|1178177_1178354_+	hypothetical protein	NA	NA	NA	NA
WP_087118549.1\|1178355_1178553_+	hypothetical protein	NA	NA	NA	NA
WP_087118550.1\|1178558_1178888_+	hypothetical protein	NA	NA	NA	NA
WP_011475634.1\|1178888_1179065_+	hypothetical protein	NA	NA	NA	NA
WP_087118551.1\|1179131_1179494_+	hypothetical protein	NA	NA	NA	NA
WP_087118552.1\|1179483_1179720_+	hypothetical protein	NA	NA	NA	NA
WP_087118553.1\|1179786_1180173_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_087118554.1\|1180198_1180459_+	hypothetical protein	NA	NA	NA	NA
WP_003703551.1\|1180459_1180693_+	hypothetical protein	NA	NA	NA	NA
WP_003703585.1\|1181344_1181587_+	hypothetical protein	NA	NA	NA	NA
WP_087118555.1\|1181601_1182042_+	hypothetical protein	NA	NA	NA	NA
WP_087118556.1\|1182052_1182334_+	hypothetical protein	NA	NA	NA	NA
WP_011475640.1\|1182351_1182534_+	hypothetical protein	NA	NA	NA	NA
WP_087118557.1\|1182608_1183049_+	transcriptional regulator	U3PIU0	Lactobacillus_phage	6.2e-05	33.7
WP_011475642.1\|1183145_1183391_+	hypothetical protein	NA	NA	NA	NA
WP_172824476.1\|1183398_1183836_+	DUF2335 domain-containing protein	S5WJ01	Leptospira_phage	1.9e-06	33.9
WP_160988124.1\|1184116_1184737_+	DNA-packaging protein	NA	NA	NA	NA
WP_081561769.1\|1184779_1184932_+	hypothetical protein	NA	NA	NA	NA
WP_087118558.1\|1184933_1185464_+	HNH endonuclease	E9LUP7	Lactobacillus_phage	5.7e-53	61.3
WP_003702110.1\|1185636_1186098_+\|terminase	phage terminase small subunit P27 family	A0A286QP74	Streptococcus_phage	7.9e-43	56.2
WP_087118559.1\|1186097_1187981_+\|terminase	terminase large subunit	E9LUP9	Lactobacillus_phage	2.6e-265	69.6
WP_087118560.1\|1187970_1188165_+	DUF1056 family protein	NA	NA	NA	NA
WP_087118561.1\|1188164_1189340_+\|portal	phage portal protein	E9LUQ1	Lactobacillus_phage	2.4e-128	56.3
WP_087118562.1\|1189320_1190040_+\|protease	Clp protease ClpP	E9LUQ2	Lactobacillus_phage	1.4e-73	61.8
WP_087118563.1\|1190029_1191229_+\|capsid	phage major capsid protein	E9LUQ3	Lactobacillus_phage	5.1e-150	66.1
WP_081515674.1\|1191240_1191564_+\|head,tail	phage gp6-like head-tail connector protein	F8HGT2	Streptococcus_phage	1.4e-17	47.9
WP_041822665.1\|1191556_1191913_+\|head	phage head closure protein	A0A2P0ZLF0	Lactobacillus_phage	8.3e-16	39.6
WP_087118564.1\|1191905_1192298_+	HK97 gp10 family phage protein	Q6J1X9	Lactobacillus_phage	9.1e-16	45.5
WP_003702100.1\|1192297_1192675_+	DUF806 family protein	A0A0M7RE53	Lactobacillus_phage	1.1e-13	35.0
WP_087118565.1\|1192676_1193381_+\|tail	phage tail protein	A0A0M7RF39	Lactobacillus_phage	7.3e-48	43.8
WP_087118566.1\|1193430_1193829_+	hypothetical protein	NA	NA	NA	NA
WP_087118567.1\|1194085_1194499_+	hypothetical protein	NA	NA	NA	NA
WP_087118568.1\|1194554_1198280_+	tape measure protein	A0A0M9JJ59	Lactobacillus_phage	2.5e-118	37.6
WP_087118569.1\|1198292_1199120_+\|tail	phage tail family protein	E9LUJ3	Lactobacillus_phage	5.9e-57	43.6
WP_087118570.1\|1199135_1201442_+\|tail	phage tail protein	E9LUJ4	Lactobacillus_phage	3.3e-65	47.2
WP_003702550.1\|1201593_1201872_+	hypothetical protein	NA	NA	NA	NA
WP_087118571.1\|1201871_1202948_+\|plate	BppU family phage baseplate upper protein	O03968	Lactobacillus_phage	1.0e-48	43.7
WP_087118572.1\|1203028_1203451_+	hypothetical protein	NA	NA	NA	NA
WP_047035190.1\|1203464_1203869_+	hypothetical protein	NA	NA	NA	NA
WP_087118573.1\|1203870_1204053_+	XkdX family protein	NA	NA	NA	NA
WP_087118574.1\|1204107_1204413_+	hypothetical protein	NA	NA	NA	NA
WP_003704600.1\|1204409_1204736_+	hypothetical protein	NA	NA	NA	NA
WP_047035194.1\|1204747_1206016_+	LysM peptidoglycan-binding domain-containing protein	Q6EVN0	Oenoccocus_phage	2.0e-120	55.9
WP_003701659.1\|1206521_1207904_-	argininosuccinate lyase	NA	NA	NA	NA
1206517:1206538	attR	NA	NA	NA	NA
WP_003709272.1\|1207927_1209139_-	argininosuccinate synthase	NA	NA	NA	NA
WP_003707035.1\|1209700_1210876_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_087118575.1\|1210891_1211881_+	D-2-hydroxyacid dehydrogenase	Q89388	Paramecium_bursaria_Chlorella_virus	4.8e-45	36.8
WP_087118576.1\|1211899_1212949_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA
WP_172824493.1\|1213402_1216471_+	MucBP domain-containing protein	NA	NA	NA	NA
WP_157663091.1\|1216563_1217466_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8
WP_087118312.1\|1217462_1217981_-\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_003702586.1\|1218063_1219686_-	ATP-binding cassette domain-containing protein	A0A1V0SKJ1	Klosneuvirus	1.0e-52	27.7
WP_087118578.1\|1219760_1220531_-	nucleoside phosphorylase	F5CA76	Streptococcus_phi-m46.1-like_phage	5.7e-38	47.5
WP_003699642.1\|1220673_1220910_+	hypothetical protein	NA	NA	NA	NA
WP_087118579.1\|1220915_1221755_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.1e-45	39.1
WP_087118580.1\|1221905_1222430_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003699646.1\|1222502_1223480_-	ribose-phosphate diphosphokinase	A0A2K9L8D8	Tupanvirus	1.5e-43	37.0
WP_081511705.1\|1223570_1224980_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0N7G7P8	Chrysochromulina_ericina_virus	3.5e-25	30.6
WP_087118581.1\|1225122_1226340_-	MFS transporter	NA	NA	NA	NA
WP_003709294.1\|1226471_1227311_-	pur operon repressor	NA	NA	NA	NA
WP_087118582.1\|1227479_1227752_-	hypothetical protein	NA	NA	NA	NA
WP_087118583.1\|1227751_1228288_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_087118584.1\|1228299_1228707_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_087118585.1\|1228937_1230029_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_087118312.1\|1230099_1230618_+\|transposase	transposase	A0A1B1P776	Bacillus_phage	5.1e-14	36.5
WP_157663091.1\|1230614_1231517_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	1.1e-40	37.8

DBSCAN-SWA_7

1263281 : 1275187

Moraxella_phage(12.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087118595.1\|1263281_1264595_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	5.0e-50	33.9
WP_081536736.1\|1264740_1265511_+	TIGR02452 family protein	G3MBH6	Bacillus_virus	4.4e-22	31.2
WP_087118596.1\|1265648_1267019_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA
WP_087118597.1\|1267154_1268633_+	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	1.4e-64	36.8
WP_003704211.1\|1268762_1269170_+	holo-ACP synthase	NA	NA	NA	NA
WP_087118598.1\|1269188_1270304_+	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	3.3e-34	32.1
WP_003699582.1\|1270350_1270599_+	hypothetical protein	NA	NA	NA	NA
WP_087118599.1\|1270614_1270983_+	type II toxin-antitoxin system PemK/MazF family toxin	A0A2P0ZKX3	Lactobacillus_phage	9.8e-12	35.1
WP_087118600.1\|1271024_1271861_-	DUF72 domain-containing protein	A0A1V0CNL1	Kaumoebavirus	5.9e-12	29.6
WP_087118601.1\|1271878_1272970_-	phosphoesterase	NA	NA	NA	NA
WP_003705736.1\|1272983_1273394_-	peptide deformylase	A0A2I7S809	Vibrio_phage	4.9e-12	38.4
WP_087118602.1\|1273492_1274209_+	SAM-dependent methyltransferase	NA	NA	NA	NA
WP_087118603.1\|1274257_1275187_-	YegS/Rv2252/BmrU family lipid kinase	A0A1V0SBJ0	Catovirus	5.5e-11	26.6

DBSCAN-SWA_8

1570298 : 1579070

Prochlorococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003702184.1\|1570298_1570781_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.2e-22	37.9
WP_003702195.1\|1570777_1571812_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_014568323.1\|1572123_1572837_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	M4R1E8	Synechococcus_phage	6.3e-39	37.8
WP_003703354.1\|1572855_1573104_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003700039.1\|1573103_1573778_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_087118650.1\|1573779_1576005_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.5e-144	39.9
WP_003707943.1\|1575980_1577432_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.5e-63	35.6
WP_081511976.1\|1577432_1578470_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	5.9e-62	42.5
WP_081511977.1\|1578482_1579070_+	phosphoribosylglycinamide formyltransferase	E3SNR5	Prochlorococcus_phage	1.5e-25	37.1

DBSCAN-SWA_9

1632777 : 1641530

Brevibacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_087118665.1\|1632777_1635252_+	ATP-dependent RecD-like DNA helicase	A0A0K2FLP8	Brevibacillus_phage	7.2e-58	27.0
WP_087118666.1\|1636816_1637419_-	hypothetical protein	NA	NA	NA	NA
WP_191980884.1\|1637470_1638553_-	NINE protein	A0A0A8WJ41	Clostridium_phage	3.5e-17	30.7
WP_034982467.1\|1638620_1638818_-	hypothetical protein	Q9T1Z0	Lactococcus_phage	1.1e-14	64.5
WP_081540921.1\|1638823_1639387_-	hypothetical protein	NA	NA	NA	NA
WP_087118667.1\|1639433_1639964_-	PH domain-containing protein	A0A0F6N4L7	Staphylococcus_phage	7.0e-27	44.8
WP_143455587.1\|1639989_1640601_-	hypothetical protein	NA	NA	NA	NA
WP_034982470.1\|1640665_1641091_-	ImmA/IrrE family metallo-endopeptidase	Q9T201	Bacillus_phage	1.7e-07	36.7
WP_081540734.1\|1641104_1641530_-	helix-turn-helix transcriptional regulator	A0A2P1JU09	Anoxybacillus_phage	5.8e-24	43.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_LT604075

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_LT604074

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection