CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_LT634361	Tenacibaculum maritimum NCIMB 2154 chromosome MARIT	6 crisprs	cas3,DEDDh,cas1,cas2,cas9,WYL	5	18	0	0

1. NZ_LT634361

CRISPR-Cas detection and classification

Crispr_ID: NZ_LT634361_1

• CRISPR_ID: NZ_LT634361_1
• CRISPR_location: 80691-80802
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_LT634361_1

Consensus_repeat	Method
TTGATTGGTAAACTTTTAATTTTAGAAAAAAATAACCTT	CRISPRCasFinder

spacers of NZ_LT634361_1

>1.1|80730|34|NZ_LT634361|CRISPRCasFinder
ATTAAAAAAGATATGGATAGTCCTGTTAATCAAG

CRISPR arrays and Neighbor proteins around NZ_LT634361_1

CRISPR arrays

The CRISPR arrays of NZ_LT634361_1

>merge|NZ_LT634361|1|80691-80802|CRISPRCasFinder
TTGATTGGTAAACTTTTAATTTTAGAAAAAAATAACCTTATTAAAAAAGATATGGATAGTCCTGTTAATCAAGTTGATTGGTAAACTTTTAATTTTAGAAAAAAATAACCTT

>NZ_LT634361|1|1|80691-80802|CRISPRCasFinder
TTGATTGGTAAACTTTTAATTTTAGAAAAAAATAACCTT	ATTAAAAAAGATATGGATAGTCCTGTTAATCAAG
TTGATTGGTAAACTTTTAATTTTAGAAAAAAATAACCTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_100210493.1|84003_84711_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210492.1|83398_83965_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210480.1|63848_64631_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210485.1|76350_76557_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210491.1|83171_83396_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210490.1|82687_83062_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210497.1|86561_87134_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024742019.1|62046_62988_-|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl|CDD|234929
NZ_LT634361.1|WP_100210483.1|73809_74343_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210486.1|76679_79445_+|hypothetical-protein	unknown	unknown	gnl|CDD|373924
NZ_LT634361.1|WP_136439012.1|84722_85208_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210481.1|65053_67345_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|275036
NZ_LT634361.1|WP_100210495.1|85232_85445_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210484.1|75803_76361_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210489.1|81857_82670_+|hypothetical-protein	unknown	unknown	gnl|CDD|340946
NZ_LT634361.1|WP_100210482.1|67353_73800_+|hypothetical-protein	unknown	unknown	gnl|CDD|274730
NZ_LT634361.1|WP_100211974.1|74937_75810_+|hypothetical-protein	unknown	unknown	gnl|CDD|373924
NZ_LT634361.1|WP_024742028.1|81259_81745_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100210496.1|85542_86586_+|hypothetical-protein	unknown	unknown	gnl|CDD|274730
NZ_LT634361.1|WP_157926157.1|79525_79978_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_100210481.1|65053_67345_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|275036	TIGR04183, hypothetical_protein, Por secretion system C-terminal sorting domain. Species that include Porphyromonas gingivalis, Fibrobacter succinogenes, Flavobacterium johnsoniae, Cytophaga hutchinsonii, Gramella forsetii, Prevotella intermedia, and Salinibacter ruber average twenty or more copies of a C-terminal domain, represented by this model, associated with sorting to the outer membrane and covalent modification.	4.45227e-09
NZ_LT634361.1|WP_024742019.1|62046_62988_-|ribose-phosphate-pyrophosphokinase	gnl|CDD|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_LT634361.1|WP_100210496.1|85542_86586_+|hypothetical-protein	gnl|CDD|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	3.33094e-10
NZ_LT634361.1|WP_100210482.1|67353_73800_+|hypothetical-protein	gnl|CDD|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	1.97192e-11
NZ_LT634361.1|WP_100211974.1|74937_75810_+|hypothetical-protein	gnl|CDD|373924	pfam15528, Ntox23, Bacterial toxin 23. A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-beta fold and conserved ND and DxxR motifs and a histidine residue. In bacterial polymorphic toxin systems, the toxin is exported by the type 2 or TcdB/TcaC secretion system.	1.69971e-32
NZ_LT634361.1|WP_100210486.1|76679_79445_+|hypothetical-protein	gnl|CDD|373924	pfam15528, Ntox23, Bacterial toxin 23. A predicted RNase toxin found in bacterial polymorphic toxin systems. The toxin possesses an all-beta fold and conserved ND and DxxR motifs and a histidine residue. In bacterial polymorphic toxin systems, the toxin is exported by the type 2 or TcdB/TcaC secretion system.	9.76912e-31
NZ_LT634361.1|WP_100210489.1|81857_82670_+|hypothetical-protein	gnl|CDD|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	0.000613119

Protein sequences

>NZ_LT634361.1|WP_157926157.1|79525_79978_+|hypothetical-protein
MKKNKVENLNKIRFDGYYYRFEEDRYNQGKMKITSVFFMKEGLRVNSFYTSFENFKEFEKFLLSDDFNLMLRNNKYLIKPFLIEGDKIISQSVIGGGNFAKHVSTTVTQIESLEKIKDVKGYGLDIYIENEEYMFKKFKKIYKVKEKINM
>NZ_LT634361.1|WP_100210486.1|76679_79445_+|hypothetical-protein
MGVALIHMNGRMYDAKLGRFLSPDNFIQEPFSTQSFNRFGYVWNNPLKFTDPSGEIIWFVVASVVIGGTMNVVSNWDKIDGWGRKTKLTDPSAGTYTYKYNNLGEVLEETTPKGKTIYTYDGFGKTMTKKILGNKTNLSLNYTYDPSTKLLKNIWGKNHNTNEDYAYVYEYDAYKRLEITTEYTGKAVYDYRVTRDDFGRVAKEAYWARNKSNGEISYVKTQNIYDAGVVTEILDAGNGKSLWKLKEVNERGQAKEVLLGNGMVKKRSYDEFGFLTKMLDQTVEASPKKALDLAYSFDTQRGNLRSRKNNNLGWNESFTYDNLDRLTNISGSVNRSQQYDERGRITSNSEIGEYNYTSTASYHLQEVDLNTKGDLYYQNQPIQKITYNAYKKPLSISVKDKARVDFEYGILQNRSHAYYGGNEANKLDRRYHKHYAAIAPIEIEEDKQGNTKIITYIGGDAYTAPVVYIKQTASGSSNGYHYVHRDYLGSLLGITDTNANVLEQRQFGAWGEVDKFKSLHSEIDFEYGTTLLNRGYTGHEHFMGVALIHMNGRMYDAKLGRFLSPDNFIQEPFSTQSFNRFGYVWNNPLKFTDPSGEEFITAVLIGALIGATAGAMGYIINAAITGQWNWGNFGMSILGGAISGAIGGAIGPTALFKSILTNGFWGTAAIAAASSFLPSLDVKIGDFSFGLSPALAFGRATGFGVNVSVSYQDGDFTFSAGYGVTFYGTAHGTGKKGWEHRFSGSIGSNGKVKFSAYTTYFSSGKTSQQVGGFSLGHGDWNIRYENDFIEKPLKYVGKYLADGKDRFRTTALQLSYKDYSVGLKFFTGDPLKGEKRDKSNPNAKYGIYSNPEADEYRLGSVLLGYKGYQVGYHNEAIRGAIQNKFVHNKLTDDSGWFRELPGRFPSHSYFQYQSYNPYTLW
>NZ_LT634361.1|WP_100210485.1|76350_76557_+|hypothetical-protein
MIGKLLILEKKITFLLIVVFFSCSSDEVPIIEPQEKSFTVQLVTINSTVNIYELATFEKKLAHLAKVL
>NZ_LT634361.1|WP_100210484.1|75803_76361_+|hypothetical-protein
MVSRFIYFSIIFSLLSCNSIELRKLSNLSSVKVPKDNSFYKEYDEKLNVQLPSNIDLTSLYEYAYQIDYKNKKFFNTRKNNKSAFKFYKKGRVNLFYYDENKKNNFDSNKYGYRGICYKEKNNFKLLFIAPITENRKYGVQNYKMEMKGDTLLISLIKKHLTEDQIFTDVYIKKDMDSPVNQIDW
>NZ_LT634361.1|WP_100211974.1|74937_75810_+|hypothetical-protein
MSILGGAISGAIGGAIGPTALFKSILTNGFWGTAAIAAASSFLPSLDVKIGDFSFGLSPALAFGRATGFGVNVSASYQDGDFTFSAGYGVTFYGTAHGTGKKGWEYRKSWGVNWDDGKQGFGIHSTNFKSGETSQKVGGISYRNGDFGFRYENDGAPFGGTLGDGSDRFRTAAVSINYKDYSVGFNLFTGSRTDYSGDEEEMAKGTQYGKYNEKMPAGFVKEDGEAYRLGALYFGYKGFRLGIDSDRRVRHPIQDIGAHWWISKQPGFYSYSDNIAGYFQYQSFNPYTLW
>NZ_LT634361.1|WP_100210483.1|73809_74343_+|hypothetical-protein
MEIFKKEIKFDNLAEVYVGFKLGIINVDEVLNLIENDKVEDFEANDYSRLIINRETNIKFKSEFEEITNRIIKEQNLVEKRDLVDQYFLLPTITRIWELECLLRKVNGYNTVPNYKTLVLEGVYELFYFFDYPSEWSLNKFILYSMNDNGKSLNQDELYENLLSFVNKEVNYFINRK
>NZ_LT634361.1|WP_100210482.1|67353_73800_+|hypothetical-protein
MKKKLYTLIVFLLFIGVQFSNAQDPNISGRKSFVEYKYKKTEIKTKRTSNEAKKQQHSETINSSSSLNTKVEELARSVSTEAGSTAGALSVSLTGAASYSIPIMVPPGIKDVVPNIAVSYTSQGANGLAGWGWNISGLSTISRIPATKYYDNKHDGIDFKDDRFSLDGQRLIIKSGTYGASGSVYQTENYSNVKVVAYGTSPYGSTYGPSYFIVYYPNGTRAWYGNSGNSRSRLEWAIFRWQDPQGNYVDYNYQSDNGLLSIKTIRYGGRIGGASPTNQINFAYISRSRPESVYVGGYSFKRSNLLKSIQVTASGSQYRKYELTHDSTSLEYQRLTSVKEYNAENKVLRPIVFGYEDTSSWIKDRVVSADLYPGFDYKTSNLIAGDYDGDGRTDVVFYDKNKRDEIYMHTKLYDSISSAYSVKTDGFFTDIFSSTILGGDNSVLSSQAMTTIKETSSSNSSFSSIRFRTFAKLPYGIVHQYDKVWKPSKYKTDNFCGSSSYYTIPKKYISGDFNGDGLTDVLAIEEEYTTTSCRKKDCDGGSGDPIDLLLKAEGNSDKKQARLPIEPDCCECNSYTENKYNAKVHFIDLKRDITSNFSQVSGHFRKPLAPEDRLNIGDHNGDGKQDIYHFKEGKLYIYTLKDSNNLILLREETDSGIKLDNPILLGDYNGDGKTDFMVATANKSNNWRFFMSKGTSFYKQTKSLPFAYHQDEFIKGSVTKSGVYIYNPYYEYRYTAQDVNGDGKTDLIIHNTIAPYSAKDKSVEYISIYKSNQTSSSDIPIFSYETGYTDTSGQVGKYGFPIFLESNITNGNLEYGYISVNNIFMYEFAKDHRKDATLRNVTNNGVKTTIDYERLGIPENEYDPLIYRPDRSQSYPYVNINKANSFQLVKKLTEEGAGIKRYQDFLYQGAVSNVNIGFQGFLKTKRSNWYGDDVSRLWTISKYDITKKGIVTDLWVATSPHETSNYMSKTTNTFNTSLTSNKVFSSIPTKVVQYDALTGVTTTKTITYDAYKNPLTENTVYNGGSENITYTYSNNSTVSNQHYHIGRITKKVAINTIGGNAFTTEEEYNYSNNLLTEQKVRGNGTPWNTESFTYDAFGNVTKKTLRPNGLSARTENFKYDASGRFLMESMDVEGLKTMFSYDSFGNPLTTTNPFNQVTTFSYDGWNRLVSEKNYLGKITTFSYAYLDGGGLLKTTNYPQGAEEVVEYNALGWILKSRVLGINNKWTQKSFQYDVAGKETKESEPYFSSPSQWNTTAYDSYGRTIAKTSFNGLVANITYNGLVTTVDDGTKTVKTTKDGSGNIIKMEDPGGIINYTYFGNGVMKSANYGSHVVRTEIDGWGRKTKLTDPSAGTYTYKYNNLGEVLEETTPKGKTIYTYDGFGKTMTKKILGNKTNLSLNYTYDPSTKLLKNIWGKNHNTNEDYAYVYEYDAYKRLEITTEYTGKAVYDYRVTRDDFGRVAKEAYWARNKSNGEISYVKTQNIYDAGVVTEILDAGNGKSLWKLKEVNERGQAKEVLLGNGMVKKRSYDEFGFLTKMLDQTVEASPKKALDLAYSFDTQRGNLRSRKNNNLGWNESFTYDNLDRLTNISGSVNRSQQYDERGRITSNSEIGEYNYTSTASYHLQEVDLNTKGDLYYQNQPIQKITYNAYKKPLSISVKDKARVDFEYGILQNRSHAYYGGNEANKLDRRYHKHYAAIAPIEIEEDKQGNTKIITYIGGDAYTAPVVYIKQTASGSSNGYHYVHRDYLGSLLGITDTNANVLEQRQFGAWGEVDKFKSLHSEIDFEYGTTLLNRGYTGHEHFMGVALIHMNGRMYDAKLGRFLSPDNFIQEPFSTQSFNRFGYVWNNPLKFTDPSGEIFWSVVIGAVIGAYVGGVQANGSYNPFEWKGNASTLLGVLGGAIIGGISGGVGAYAAAKLAPLITTAGGFLGGAVSGFIGGAVGGTIYGGFMSQLPGGDGDFWGGAAKGFIMGAVGGTILGGVIGGIRSVFHGKGFWTGKDLASKATAKTISSLKTESVHDVAPKNNLSNQKLDLKSSDIVKEAIPDYGSVKYKAGYLKKVTGLDGQHNWNRHTIEVVADRGKVFNIIGGDQKSYTLIQHLGKHHGKSGIFELIIDNGVLTHQRFIPGGIINGIPNQVVPNVSRSVSPAYPWWK
>NZ_LT634361.1|WP_100210481.1|65053_67345_+|T9SS-type-A-sorting-domain-containing-protein
MSGFEQNGSTAENSREYGIGPEGTNVLLWKATPDSSRNADGGWNSSYSDIDHTKTYRLVIWLKKTSSNHGTSFFGFHSPDNGLRLDGTVNNNPYFWVGDLPKLNKWYMLVGFVHGSAYNSTINYGAIYDGATGQKVKEITDYKFKNTATVLRHRVYLYYDINTTDRQYFYAPRMEMVDGKEPTVQELLGRNDSGSSNLLAPYLQNWTVGNGSTSGFAQNGSTSENSREFGRNHIGEEVILWKATPDGSKNGGGGWNSSYSDIDHTKTYRLVIWLKKTNSNHGTSFFGFHSPNNGLRLDGTVDNNPYFWVGDLPKLNKWYMLVGFVHGSTYNSTINYGAIYDGATGQKVKEITDYKFKNTATVLRHRVYLYYDINTTDRQYFYAPRMEMVDGKEPTVQELLGRNDSGSSNLLAPYLQNWTVGNGSTSGFAQNGSTSENSREFGRNHIGEEVILWKAIPDASSNADGGWNTSWLRANANTSYRYSVWIKKTTSISGFTYFGFNANHNGSLRLDGTYNSNPYFFAGDLPKLNRWYLLVGYVHKSSHTGTTNTGGIYDGTTGEKVRTITDYKLKNTVTELRHRSYLYYDTNTLDRQYFYEPRIDPINGKEPTINELLKINNDSKIILSYDIAGNQTQNFYCGDPSYCAPPAARKEEKEKVEDAVSSEIEETTIEETEKEVLENFISDDHVHIYPNPTDGLVTLTLGDDLLKNIHTIKLYNANSVLIKNINTKESNTQLDFTNMPIGVYFVHIHLNKGRSITKKVIKK
>NZ_LT634361.1|WP_100210480.1|63848_64631_+|hypothetical-protein
MNEKQIIKGNYQVGETTEKDVEITYDNDSGKEENNIKLLKFLNSPWQLVKNGAKYGVNGAKRFFTVLFLFGACNTFLFFYATIRLFSSGFTFTKLLYTLLVLVIGITLTAFATYRTYQYVIIDTVRVIYENLASLLKKLTDLLVDKAAAISGGKVNLSAQQLSKAVDMGTLVHETYSGLPRFLRKGIVLIFSKIPLVGMLADLKDDITAGNKATASTKLYNKMDGFITESVFSNNNTKWVWWLLPLNIIGLFLLVKFTIG
>NZ_LT634361.1|WP_024742019.1|62046_62988_-|ribose-phosphate-pyrophosphokinase
MTTNQLNPKIFACSQSIELAKEIATKYGTTLGKVNTTHFSDGEFQPAFEESVRGRRVFIIGSTFPSADNLMEMLLMLDAAKRASARHITAVMPYFGWARQDRKDQPRVAIGAKLVANLLQSAGATRIMTMDLHADQIQGFFEKPVDHLYASTIFLPYLKSLNLANLTIASPDMGGSKRAYAYSKYLESDVVICYKQRKRANVVSHMELIGEVEGKHVVLVDDMIDTGGTLTKAADLMIERGALSVRAVCTHPILSGDAYEKIQNSSLTELIISDTIPLKKKVSKIKVVSCATLFADVMHKVQENTSISDEFLM
>NZ_LT634361.1|WP_024742028.1|81259_81745_+|hypothetical-protein
MKRFVFFIKLAFCFFISCKAIKRNEKQEVGIEKKIKVEDFITFGCRINDDSIYFILKNNTSKVLRISNPKYWSFIQSNLYSQNEVLVPSIKVKPYIGLRDNMLIIEPYQKIETKFDYTISQLYKVKLKGNYTLNFIYRGKIKIKSINSNFETLSNSVLLEF
>NZ_LT634361.1|WP_100210489.1|81857_82670_+|hypothetical-protein
MVIGAYLGGVQANGSYNPFEWKGNASTLLGVLGGAIIGGISGGVGAYAAAKLAPLITTAGGFLGGAVSGFIGGVVGGTILGGVIGGIRSVFHGKGFWTGKDLASKATAKTISSLKTERVHDVAPKNNLSNQKLDLKAPSGNNKPVTTGSYKKIGLDGRTRINLLEESKKLKFFKSENLAIDHFNKHSKSIMKLTGRNIYNYKQYISEANHIIKNGTFLPQKNAYVKFMSGYGGKARFGYVGLDRATGSITTYHTKSLSDIVRIAPDIFSK
>NZ_LT634361.1|WP_100210490.1|82687_83062_+|hypothetical-protein
MKNINIEKIEWMSKEAEEAIIYLNDGNYKIICFSCPFNEEELNKGNYQINCYDTIGFERIKEEAYHIGKLSDFFSYRLYCKVKDRKEGIVKIGEFQFYLEDGVFPGDIADGDFVTFECGRFDLY
>NZ_LT634361.1|WP_100210491.1|83171_83396_+|hypothetical-protein
MNKRDFTNLVNDFSKNYGTEKIINPSGQRIQLYDFGIQGSGSMRGYMGSNTFRFYWHSQGSNYKFTINVFDNIK
>NZ_LT634361.1|WP_100210492.1|83398_83965_+|hypothetical-protein
MFFLDKITFFNETQTYLLKEKVFFNKTKKEDDFFGVMTENNEDCFFEFRKKNIPLEILKSMIEENNQLLLKFEDLEEIQYSYNLDYNLVNESNDLLKTIINKFNYKSDDGFLIINEEKKWCYYYGEDLYNSIKTPNTFEPYNLFIIGKDFESTFLNEVNKIEKFKIKLSSDNNIVTKKKSGVKEFIFL
>NZ_LT634361.1|WP_100210493.1|84003_84711_+|hypothetical-protein
MVGAVSGFSAGAIGSTIGYYTKLGLEKAGANNFWKASGIITAGSLSGGVGSFVSGGKFWDGFRNGAISSSLNHVAHMIQESAKSKKIVKNAKKQDKSKKWSYEAERDKFKSKTNKCNKFVYDILTESGASPGLPNGNPIKKFFGYGSPPTASQWADSNYDIPGWDVVSSPKAGDVVAVSANFSDATDHVGIMISETQSIGASHHTVRITNFGTTSYDLSVYPGNNGYIYRRYVGN
>NZ_LT634361.1|WP_136439012.1|84722_85208_+|hypothetical-protein
MKKIITLIILVTLIVMLIKMKNIYKVNKEYAIFNEFGKEIPSKIIKKKNDNYVVIFLIDKLMTYSALVVSPKNKLIGIPNGGGERYFNLTKNYIYDKWTDDDSFTIIYIDGNEPFKFNQYNEYPNKEPIVKNINFLDTEVSFDSFDKLKEYGKKVVLKKIK
>NZ_LT634361.1|WP_100210495.1|85232_85445_+|hypothetical-protein
MKNKVIILLLTIMLFSRNSDDNRITELQEKSFTVQLVTINSTVNIYELATFEKKIAHLAKFFNIKQLIQY
>NZ_LT634361.1|WP_100210496.1|85542_86586_+|hypothetical-protein
MGVALIHMNGRMYDAKLGHFLSPDNFIQEPFSTQSFNRFGYVWNNPLKFTDPSGEIIWFVVASVVIGGTMNVVSNWDKIDDFWDGLGYFTSGGVQGGLATLGPVGALAGGFLSSAANTAIQGGNIGEIFSSGVIGSVAGFAGGAAGKWAGKYLGNLIVNGVNIASPVIKGIVGGTLGGAVGGYVGGFTGGYLATGNLNKAHKAGLSSASMGVPMGVLAGGVGAYKWATDNKIDPWTGQKINGHHSFPKFMGGEANQKLTNIGEETHKQLHRDMNNFLKKQTDDFGNHMRPQRGNPGRLIQRNFNLDVRIKTLNQFYKQNWFRYPRSTFDYYRNSNQFNLQWKQPFKK
>NZ_LT634361.1|WP_100210497.1|86561_87134_+|hypothetical-protein
METTFQEIGKLLVGTDANPEHMFPDRDFFDKCTICNTPRNREINPRFKLGEKRADIMHTYDGYTIVSERFKKFCEFNNYKGLSFEKLPNNENFYSFTSTNVVVLDTVRRKIHFSEYCKSCNRYASIAGADPAFAKDSNLNLEDGIYRSDIEFGYAYEQHPIFIISLNTYKKMKKEKFKGIYLKKNNVLFR

Crispr_ID: NZ_LT634361_2

• CRISPR_ID: NZ_LT634361_2
• CRISPR_location: 114873-115018
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_LT634361_2

Consensus_repeat	Method
TCTTTCTTACAATCAGCCTTACAAGCATGTTGCTTTTTTTCTTT	CRISPRCasFinder

spacers of NZ_LT634361_2

>2.1|114917|58|NZ_LT634361|CRISPRCasFinder
GGAAGAGCAACAAGGTTTTTCACAATCTTTACTGCAAACTTTTTTACCAGCGCAGCAC

CRISPR arrays and Neighbor proteins around NZ_LT634361_2

CRISPR arrays

The CRISPR arrays of NZ_LT634361_2

>merge|NZ_LT634361|2|114873-115018|CRISPRCasFinder
TCTTTCTTACAATCAGCCTTACAAGCATGTTGCTTTTTTTCTTTGGAAGAGCAACAAGGTTTTTCACAATCTTTACTGCAAACTTTTTTACCAGCGCAGCACTCTTTCTTACAATCAGCCTTACAAGTATGTTGCTTTTTTTCTTT

>NZ_LT634361|2|2|114873-115018|CRISPRCasFinder
TCTTTCTTACAATCAGCCTTACAAGCATGTTGCTTTTTTTCTTT	GGAAGAGCAACAAGGTTTTTCACAATCTTTACTGCAAACTTTTTTACCAGCGCAGCAC
TCTTTCTTACAATCAGCCTTACAAGTATGTTGCTTTTTTTCTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_024741698.1|111401_111830_+|single-stranded-DNA-binding-protein	unknown	unknown	gnl|CDD|235585
NZ_LT634361.1|WP_084339889.1|111912_113154_+|gliding-motility-associated-protein-GldE	unknown	unknown	gnl|CDD|274626
NZ_LT634361.1|WP_024741709.1|122587_123178_+|SMI1/KNR4-family-protein	unknown	unknown	gnl|CDD|378155
NZ_LT634361.1|WP_100210505.1|102908_103901_-|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl|CDD|274250
NZ_LT634361.1|WP_024741701.1|113751_114774_-|COX15/CtaA-family-protein	unknown	unknown	gnl|CDD|367131
NZ_LT634361.1|WP_100210509.1|116540_117026_+|50S-ribosomal-protein-L21	unknown	unknown	gnl|CDD|235510
NZ_LT634361.1|WP_024741696.1|109894_110185_-|integration-host-factor-subunit-beta	unknown	unknown	gnl|CDD|259858
NZ_LT634361.1|WP_100210506.1|108050_109583_-|ribonuclease-E/G	unknown	unknown	gnl|CDD|378414
NZ_LT634361.1|WP_100210507.1|110317_111364_+|A/G-specific-adenine-glycosylase	unknown	unknown	gnl|CDD|224115
NZ_LT634361.1|WP_024741705.1|117048_117309_+|50S-ribosomal-protein-L27	unknown	unknown	gnl|CDD|235464
NZ_LT634361.1|WP_024741703.1|115514_116387_+|EamA-family-transporter	unknown	unknown	gnl|CDD|273359
NZ_LT634361.1|WP_100211977.1|105762_107973_+|patatin-like-phospholipase-family-protein	unknown	unknown	gnl|CDD|132844
NZ_LT634361.1|WP_100210511.1|124959_126048_-|DNA-polymerase-IV	unknown	unknown	gnl|CDD|235035
NZ_LT634361.1|WP_024741711.1|124362_124893_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024741700.1|113146_113698_+|gliding-motility-lipoprotein-GldD	unknown	unknown	gnl|CDD|132551
NZ_LT634361.1|WP_159242768.1|120718_122542_+|tetratricopeptide-repeat-protein	unknown	unknown	gnl|CDD|225814
NZ_LT634361.1|WP_024741707.1|119879_120614_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|225818
NZ_LT634361.1|WP_100210510.1|123876_124233_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024741693.1|103967_105761_+|excinuclease-ABC-subunit-UvrC	unknown	unknown	gnl|CDD|234792
NZ_LT634361.1|WP_024741706.1|118169_119672_+|thiol-activated-cytolysin-family-protein	unknown	unknown	gnl|CDD|366559

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_024741698.1|111401_111830_+|single-stranded-DNA-binding-protein	gnl|CDD|235585	PRK05733, PRK05733, single-stranded DNA-binding protein; Provisional.	2.6654e-41
NZ_LT634361.1|WP_084339889.1|111912_113154_+|gliding-motility-associated-protein-GldE	gnl|CDD|274626	TIGR03520, GldE, gliding motility-associated protein GldE. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldC is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. GldE was discovered because of its adjacency to GldD in F. johnsonii. Overexpression of GldE partially supresses the effects of a GldB point mutant suggesting that GldB and GldE interact. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Not all Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility and in fact some do not appear to express the gliding phenotype.	0
NZ_LT634361.1|WP_024741709.1|122587_123178_+|SMI1/KNR4-family-protein	gnl|CDD|378155	pfam09346, SMI1_KNR4, SMI1 / KNR4 family (SUKH-1). Proteins in this family are involved in the regulation of 1,3-beta-glucan synthase activity and cell-wall formation. Genome contextual information showed that SMI1 are primary immunity proteins in bacterial toxin systems.	9.1293e-09
NZ_LT634361.1|WP_100210505.1|102908_103901_-|GTP-3',8-cyclase-MoaA	gnl|CDD|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	3.96392e-109
NZ_LT634361.1|WP_024741701.1|113751_114774_-|COX15/CtaA-family-protein	gnl|CDD|367131	pfam02628, COX15-CtaA, Cytochrome oxidase assembly protein. This is a family of integral membrane proteins. CtaA is required for cytochrome aa3 oxidase assembly in Bacillus subtilis. COX15 is required for cytochrome c oxidase assembly in yeast.	1.19933e-28
NZ_LT634361.1|WP_100210509.1|116540_117026_+|50S-ribosomal-protein-L21	gnl|CDD|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	6.31427e-46
NZ_LT634361.1|WP_024741696.1|109894_110185_-|integration-host-factor-subunit-beta	gnl|CDD|259858	cd13836, IHF_B, Beta subunit of integration host factor (IHFB). This subfamily consists of the beta subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.	2.34059e-33
NZ_LT634361.1|WP_100210506.1|108050_109583_-|ribonuclease-E/G	gnl|CDD|378414	pfam10150, RNase_E_G, Ribonuclease E/G family. Ribonuclease E and Ribonuclease G are related enzymes that cleave a wide variety of RNAs.	4.01794e-129
NZ_LT634361.1|WP_100210507.1|110317_111364_+|A/G-specific-adenine-glycosylase	gnl|CDD|224115	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair].	1.27093e-121
NZ_LT634361.1|WP_024741705.1|117048_117309_+|50S-ribosomal-protein-L27	gnl|CDD|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	6.86478e-52
NZ_LT634361.1|WP_024741703.1|115514_116387_+|EamA-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.09994e-18
NZ_LT634361.1|WP_100211977.1|105762_107973_+|patatin-like-phospholipase-family-protein	gnl|CDD|132844	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE hydrolyzes sn-1 esters in lysophosphatidylcholine and lysophosphatidic acid, but shows no lipase activity with substrates like triacylglycerols (TG), cholesteryl esters, retinyl esters (RE), phosphatidylcholine (PC), or monoacylglycerol (MG). This family includes subfamily of PNPLA6 (NTE) and PNPLA7 (NRE)-like phospholipases.	2.15791e-63
NZ_LT634361.1|WP_100210511.1|124959_126048_-|DNA-polymerase-IV	gnl|CDD|235035	PRK02406, PRK02406, DNA polymerase IV; Validated.	7.76878e-175
NZ_LT634361.1|WP_024741700.1|113146_113698_+|gliding-motility-lipoprotein-GldD	gnl|CDD|132551	TIGR03512, GldD_lipo, gliding motility-associated lipoprotein GldD. Members of this protein family are found a number of Bacteriodetes lineage bacteria, including both species such as Flavobacterium johnsoniae, which possess a poorly understood form of rapid gliding motility, and other species which apparently do not. Mutation of GldD blocks both this motility and chitin utilization in the model species, Flavobacterium johnsoniae. [Cellular processes, Chemotaxis and motility].	3.81928e-62
NZ_LT634361.1|WP_159242768.1|120718_122542_+|tetratricopeptide-repeat-protein	gnl|CDD|225814	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms].	6.02202e-27
NZ_LT634361.1|WP_024741707.1|119879_120614_+|response-regulator-transcription-factor	gnl|CDD|225818	COG3279, LytT, Response regulator of the LytR/AlgR family [Transcription / Signal transduction mechanisms].	1.27981e-51
NZ_LT634361.1|WP_024741693.1|103967_105761_+|excinuclease-ABC-subunit-UvrC	gnl|CDD|234792	PRK00558, uvrC, excinuclease ABC subunit UvrC.	0
NZ_LT634361.1|WP_024741706.1|118169_119672_+|thiol-activated-cytolysin-family-protein	gnl|CDD|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	1.57061e-41

Protein sequences

>NZ_LT634361.1|WP_024741701.1|113751_114774_-|COX15/CtaA-family-protein
MKKNFSLLVKVTIFSIYLIFLAGAVVRMTGSGMGCPDWPKCFGYYIPPTSENQITWQPNHTYNEGMIIIKDKTLFVAKKDLRSSNSFNETHWKKYTKHNYAKFNKYHTWTEYINRLSSVLAGFPFLLLIIFSVKFWKKDKEITLLSFASFFLLLFEAWLGKTVVDTNLKPTIITIHMVAGLIIIALLLRLLFITSEKVSIQKHLPIFNKLLIIAAIFSLIQIALGTQVRQFIDEQVKLFGFENKEYSLMNPSIKFYVHRSFTIAIIIVNLGLFYFNQIQNLGYKLVNWIVFLIFLETITGILMYYADFPIGTQAIHLLSGAILFGLQFYLWLQSRKVVTA
>NZ_LT634361.1|WP_024741700.1|113146_113698_+|gliding-motility-lipoprotein-GldD
MRSLFIVILSLILITSCKNEVIPKPKGYLSLNYPQKAYHELTLERPYSFEVPQNTIIKKLPKDWLKVIYPNLKASIDITYRPVDNNLRELLIEAEKLVFEHAIKAEQIASNDFVNKNTRVFGKMYDITGNSASQVQFHVTDSTKHFLKGSLFFYSKPNYDSVLPAVDYIKKDMIRMIESLQWK
>NZ_LT634361.1|WP_084339889.1|111912_113154_+|gliding-motility-associated-protein-GldE
MNIIVLLALLISSALISGTEVAFFSISQTNLNQLSEETKGKSVVLELLERPKKLLATILITNNFINILIVLLFSSLGELLFAEFSTTIKFLIEVVLITFLILLFGEVLPKVYATRKSVEFASFMSKPIHFLNKLLTPLSIPLISLTNIIENRLGNKNNNLSVEKLSEALELTSDHTTTKDEQKILEGIVTFGNTETVQIMKPRTDVFALCDDESYEGILNKILKNGYSRNPVYAENIDNIIGVLYAKDLLAHLDKKDFQWQQLLRKPFFVPENKKLDDLLSEFQEKKNHLAIVVDEYGGTSGIVTLEDVIEEIVGDINDEFDDDDLTYSKIDKDNYIFEGKITIKDFCRVLEDEEEEKFEEEKGESETLAGFILEISGKFPKKGEKINFNQYTFTIEALDRKRIKQVKVTRNA
>NZ_LT634361.1|WP_024741698.1|111401_111830_+|single-stranded-DNA-binding-protein
MAGTVNKVILIGHLGDEVKMRYFEGGNAVGRFSLATNESYTNRQTGEKVVSTEWHNLVVRNKLAEICEKYLTKGDKIYCEGRIKTRQWEQDGIKRYLTEIHVVDMSFLSTKKDLTAVKNQAKRTPLEKDIPKPPKENQDLPF
>NZ_LT634361.1|WP_100210507.1|110317_111364_+|A/G-specific-adenine-glycosylase
MIFSNVLINWYLQNKRDLPWRKTTNPYHIWLSEIMLQQTKVTQGLPYFMSFTEAFPTVFDLANAAEETVLKLWQGLGYYSRARNLHFTAKYIANELAGNFPDNYKELLKLKGIGDYTASAIASICFNEPTAVVDGNVYRVLSRYFGIKTPINSSIGIKEFKRLAQELIDVKNPAIYNQAIMDFGALHCKPQNPLCETCPFAEGCIALSKKMIKELPVKEKKMKVKKRYFNYIVLVNNNHTTLLKKREGKGIWEGLYEFPLIESSKYINDSELKETLEFQKLFPDEATVTLFNTKRIVHKLSHQHLHTRFWIVETHKVIPSSIFWRAIEEYPVPILIANFLKEFLFEKK
>NZ_LT634361.1|WP_024741696.1|109894_110185_-|integration-host-factor-subunit-beta
MTKADIVSRISDKSGIEKADVLATVEAFMNEVKDALESGDNVYLRGFGSFIIKTRAEKTGRNISKNTTIKIPAHNIPAFKPSKVFTEGVKNKVVVK
>NZ_LT634361.1|WP_100210506.1|108050_109583_-|ribonuclease-E/G
MRKTELIIRSNSSDIDFALLRDGKLIELNKETNDNKFSVGDIFLAKIGKVLTGLNAAFVNVGYPKDGFLHYHDLGPQVQSLNSFIKKVSTGKHKEFTLKNFRFENDINKDGSINDVLKTGQNLLVQIVKEPISTKGPRISSELSIAGRYLVLVPFSNRISVSQKIEDPKEKERLKRLAKSIRPKGFGVILRTVAQGKKVAELDRDLQNSLDRWKTMCKSIPNTNTPTKILSELNRASSILRDVMNDSFTSIITNDETLKVEIKEYLQEISPEKENIVKLHRSDTPIFEKYGIERQIKTSFGKTVSMSKGAYLVIEHTEALHVIDVNSGNRSNKASNQEETALEVNLIAASEIARQLQLRDMGGIIVVDFIDLKTAENRQKLFQHLKEEMALDRTKHKILPPSKFGLVQITRQRVRSELEIKTREPNPNKNGEVEAPIVLIDKIEVELERLLNSKKDYKKITLNVHPFIAAYLTKGVPSIRLRWFLKYKKWIKILPRDAYTYLHYKFYYKK
>NZ_LT634361.1|WP_100211977.1|105762_107973_+|patatin-like-phospholipase-family-protein
MKKFLSLLLLLTSLVIYPQKKQPKVGLVLSGGGAKGFAHVGVLKELEKAGVQIDYIGGTSMGAIVGGLYASGYSARQIEKIVTETNFYTILQDKIPRRAKTFFDKENGEKHAISLPIRENAIGLPQGVSKGQNVLNFLTELLAPVDHITNFSKLPIPFYCLATNAETGEEVLLENGFLPLALRASGSFPTLLHPVEINGDLLIDGGIANNFPVDVMKEKGVDIIIGVDVQGKLVNRKKLTSVVAILNQIVSYRMYENSDEKKRNVDVYMHPNVLDYTVVSFDKGKEILKEGERVSKPLNVIFTKIAKLQTTKRSIQRAKPNNDKFLVNKISIKGNKNYTKDYILGTLKIKMGDSITYQELSKRINSLTATKNFQRIDYHFKKLNEGKKLTLKVKESDVRARLRLGLHYDLLYRSGVLLNYNHKKIFLKNDVLSLDVVVGDNIRYNLDYFVDNGLRWNYGFKSRYNRFKTAFAFNDEVVNEIDVTYRDFTNTLYGQTTFDKKFAFGVGVEAKNLRVFSQTLKNNLERFTVFDDSNYLNGLAYLKLDTFDDRYFPSKGVYGNIGFKWFLWSNRNENIKNRIDDSNAFSRFSQLTGTVSFATTFWERLTFQYTSEAGFTLGKEASKVFDYRLGGYNKNYINNFIPFYGYEIGALSEQSFLKSEFQFRYCFLEKHYASFIANYARVGENVLKGGNLFENTKSGYALGYSLETFLGPIELKYTWSPDTSENYWLFNLGFWF
>NZ_LT634361.1|WP_024741693.1|103967_105761_+|excinuclease-ABC-subunit-UvrC
MPTPLELQIKTLPNSPGVYQYYDKNDTILYVGKAKNLKKRVSSYFTKNHEYGKTKVLVKKIAMIKHIVVETETDALLLENSLIKKHQPRYNVMLKDDKTYPWICIKKERFPRVFLTRNIIKDGSQYFGPYTSVRTVRALLDLIKELYPLRTCNYDLNERNIDSGKYKVCLEYHLGNCKGPCESYQTEAAYLQEIREIRGIIKGNFKESLEKFKEMMLDFASKMEFEEAQKIKDKVGLLANYQAKSTVVNPSINNVDVFSVISDEEYGYLNFFKIGNGAIIQSYTTEIKKKLAETDKELLELFIIETRQRFQSLSREIYVPFKVNIGNDIKVTVPKLGDKKRIVDLSIRNAKYYRQERFKQMKIVDPDRHVKRIMTQMQKDLRLHEAPRHIECFDNSNIQGTNPVAACVVFKDGKPSKKDYRHYNIKTVEGPDDFASMEEVVFRRYKRLLAENQPLPQLIVIDGGKGQLSSALKSLEILGLRGKIAIIGIAKRLEEIYYPGDSVPLYLDKKSESLKIIQYLRNEAHRFGITFHRNKRSKSAIHSELEQIPNIGKQTITTLLTKFKSAKRVKNATFEELMAEIGNARATSVYEYYHPKK
>NZ_LT634361.1|WP_100210505.1|102908_103901_-|GTP-3',8-cyclase-MoaA
MGKLMDNFGRQITYARLAVTDRCNLRCQYCMPAHGIEIVPRKDLLSYKEMYRIIRILTELGVTKVRLTGGEPFVRKGFVDFLEMLSFNDLLDTINITTNGALISKHIEKIEQLKKVKTINLSIDSLQKEKFHSITRRDVFPEVYQTLEALEKSSLHLKLNTVVQSGFNTDEINDFVALTQHKNIAVRFIEEMPFNGKGLRETKEVWNYNRILSEIKSAFNITKTETEKSATSHNFSVKNHKGSIGIIPAFTRTICNDCNRIRITSTGLFKNCLFDEGVFNLRDFIRNGASNDDLKTLFSSLVKQKPKNGFIAEINRKKGSVSESMSSIGG
>NZ_LT634361.1|WP_024741703.1|115514_116387_+|EamA-family-transporter
MNSQQKKWMYLLILSIVWGSSFILIKKSLQGVTPVQLGALRMLITAFFLLLIGFKSIKKIEKKHWKYIAYSAALGTFFPVFLFAFAIRGIDSAIVSILNSLTPFHTFIFGALVFGFSFKKKQFIGILLGLVGTLILIFKGAALHPDQNYWYALLIIIASIGYAFNVNIIKRYLYDLDALAITTGNFLLLIIPALLVLIFSNFFLTFEMNQETGEALGYIIILSVVGTGIAKVLFNKMVHLSSPIFAASVTYLIPVVAVIWGIIDGEKLSLFQLLAGGIILLGVYWVNKVK
>NZ_LT634361.1|WP_100210509.1|116540_117026_+|50S-ribosomal-protein-L21
MYAIVEIAGQQFKVAKDQKVYVHRLQEAEGSEVVFDNVMLVEDKGNVTIGAPAIEGAAVTAKVLGHLKGDKVIVFKKKRRKGYKKKNGHRQYLTEIQIASIAASGAKKAVTKKEAPKAEAKEASNDLSSKTVAELKALAKERGITGYTSLKKVELIEALRK
>NZ_LT634361.1|WP_024741705.1|117048_117309_+|50S-ribosomal-protein-L27
MAHKKGVGSSKNGRESESKRLGVKIFGGQAAIAGNIIVRQRGTTHNPGENVYMGKDHTLHAKVDGVVEFKKKKDNRSYVSIIPFEA
>NZ_LT634361.1|WP_024741706.1|118169_119672_+|thiol-activated-cytolysin-family-protein
MKSKLLQVASCLLLMACSSNSKEEIFEGSKLNDYVEKLPSVEQIAPFEERKVSNDTNRGRFRNDDFDLEEYEVAVGFDEQFLFSANDEIFYPGSLVVASSVIEGEYVPITVPRAPLKISTSLVGDKTSITVDSPKLSSTRDAISSLLSDRNFEAPPASLRYTTDEVFSKNHLKVAIGASYEGTSTSVSGSAEFNYDKETTKMIVKVIQKYYTIDSDIPSNPSDFFVEEFNFKSKLGDRKPLYVSSVTYGRVFLMSIESSMNKIDLEAALQGSFLKGKITAKAEFEFSKIAKTSTIKATILGGNSDLAGAEIGDLSAVKDFISKGASYSKENPGIPIAYRLRELGTNEVFKNVIYSKYTKRIKKDAALTKRISFDLNFNWGGVKSTSGADIDPYYIYIKRMNRKTRAVSENRVPGFGVYYWTKTRLEGVGKDDVVYIIYRDSDGNDNHAFKLPETAGLIRKGLNNATSKDLFPYDSNPYITSELYHKTSVLKVGIESHRIF
>NZ_LT634361.1|WP_024741707.1|119879_120614_+|response-regulator-transcription-factor
MLRAVIVDDEPKAIQSLSWELSNFNKDVKVIETFTDEEEGISYLNKNEVDCLFLDIEMPTMDGFQLLERLTNKNLAIVITTAYNEYAIKALKNEAIDYLLKPIDSDDLGETITKIKKFHNKTDNFQKFERILSSFSEKFNRRKIILSTDGKLIFLDDSEIIFVESDGNYCSIYTTNGKKIVVTKKLKEINSLLPEEHFFRIHNSYVINLNKIKEFLRTDGYVVLENNHKIPVSRQRKSEFLEKF
>NZ_LT634361.1|WP_159242768.1|120718_122542_+|tetratricopeptide-repeat-protein
MKKPKSYFELLRFFKKYNPKVEEINVFLEESKKRKYAVGEIFSYNFLGKHYRKKSLFEKALRNYNQALHLAKRTKNVEGEIVTLNQIGVVYRRQDKIRSALNYHQSALELAQQRKNPSEEMKRSISISQNSIGNIYLTLKQYELALEQFEKSISLHREGKQGNLRSLAINSENIGYAQEKLGYLDDALKNYQLSLKYNIQGNFTEGKIKCYNSISSILVSMKEYEKALEIIEPVLPMAMEFNDMYYLAETYKNLGYVQLNLNKIEEAKKNLKEGIRVATAYKVKTEITESYIYLSELYNKQGDYKTAFHYYKKSKEEEAQTFNERNLLYVNDLITKYDSEVKSNQIRNLARENEITKLKLTRNRNFLIIILVSLALLSVVWYSFNRQRLLKDEKKILMLEQEALQSQMNPHFIFNALNSIKLYIINNEQKNAVYYLNKFSKLIRNILESSKVKEVSLHDELKTMRLYMSIENIRFSNEITYEEKINPNLNIDIVKVPPLVLQPFLENAIWHGLSSKKGEKEVKLSVDKISNKFIEIAIVDNGIGRNAAQKIKASKSLKRKSIGIDLTKKRLQNFTSEYKNNYSLKYYDLKKDGLIVGTKVCLRIPLS
>NZ_LT634361.1|WP_024741709.1|122587_123178_+|SMI1/KNR4-family-protein
MVKEYIKGLKNAYINANEKELWEHFEAIKHGASKEALKALKEVYQDVPDELIDLLKYVDGTYWRRYKDEEIAFYFLGADLCEYPYYLLSTHEIIEHKNDAVKYYADYIEREYEGVAIDDKIIDKAAQLDWLHFSDCMNNGGTSQLFIDFSPSEKGKKGQIVRFLHDPDEFKVIADSFASYLKKLMEHDYDFISEGL
>NZ_LT634361.1|WP_100210510.1|123876_124233_+|hypothetical-protein
MFKSCTSFLRCVEKFVQEIAEKSCTSFLEGIEKFVQEIEEQSCTSFLEGIEKFVQEIEEQSCTSFLRCVEKFVQEIVEKSCTSFLRCVEKFVQEIAEKSCTSFLEGIKKFVQKEAYYQ
>NZ_LT634361.1|WP_024741711.1|124362_124893_+|hypothetical-protein
MIKDIKKYFNISNQGIAAYIGKSISLVNSIIIGRRYFSLPDLNKLLKLYKSLQMEKGILELPEVIALIDKEKESALPWVKQQIKEKKRALIICKNTLKKLQLRRKVWLRGLGVCTTLLNDQTLDGATLKWLSLRKKHLSIRLKEDTYFKEIAYELRIKSLKGELSYLKKMVEKEFK
>NZ_LT634361.1|WP_100210511.1|124959_126048_-|DNA-polymerase-IV
MELQPPFRKIIHVDMDAFYASVEQLDNPSLRGKPVAVGGNEIRGVVAAASYEARVFGVKSAMSAALAQKKCPHLIFVKPRFARYKEISLKIREIFYDYTDCVEPLSLDEAYLDVTINKKNINSASLIAEEIRRRIWKELELRASAGISINKFIAKVASDMNKPNGQKTVHPEEVLLFLEELPIRKFYGVGKVTAAKMYANGIFNGLHLKQRSLEELTALFGKSGSHYYHIVRGVHKSEVKPNRIRKSIAAERTFTENLSSEVFMLAQLNKIAEELDRRMKTSKAKGKTITLKIKYSDFSQQTRSKTLLNFTDDKSVFFPVVKELLYKEKLKNSVRLLGISFSNLNTEKKKAVWVQLKLDLFL

Crispr_ID: NZ_LT634361_3

• CRISPR_ID: NZ_LT634361_3
• CRISPR_location: 1741238-1741322
• CRISPR_type: Unclear
• Repeat_type: NA
• Spacer_info: 1 spacers
• Cas_protein_info: cas3

Consensus repeat of NZ_LT634361_3

Consensus_repeat	Method
CTCGTAAAAACGCTGTACAAGATGTCAAC	CRISPRCasFinder

spacers of NZ_LT634361_3

>3.1|1741267|27|NZ_LT634361|CRISPRCasFinder
CTCATTTTTTGTACAGTGTTTTTTTCC

CRISPR arrays and Neighbor proteins around NZ_LT634361_3

CRISPR arrays

The CRISPR arrays of NZ_LT634361_3

>merge|NZ_LT634361|3|1741238-1741322|CRISPRCasFinder
CTCGTAAAAACGCTGTACAAGATGTCAACCTCATTTTTTGTACAGTGTTTTTTTCCCTCGTAAAAACACTGTACAAGATGTCAAC

>NZ_LT634361|3|3|1741238-1741322|CRISPRCasFinder
CTCGTAAAAACGCTGTACAAGATGTCAAC	CTCATTTTTTGTACAGTGTTTTTTTCC
CTCGTAAAAACACTGTACAAGATGTCAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_024740461.1|1737143_1737890_-|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl|CDD|187594
NZ_LT634361.1|WP_100211215.1|1745208_1745808_-|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|238317
NZ_LT634361.1|WP_100211209.1|1730344_1731559_+|methyltransferase-domain-containing-protein	unknown	unknown	gnl|CDD|237857
NZ_LT634361.1|WP_100211214.1|1744429_1745212_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	unknown	unknown	gnl|CDD|238574
NZ_LT634361.1|WP_100211206.1|1726679_1727321_+|peroxiredoxin	unknown	unknown	gnl|CDD|239314
NZ_LT634361.1|WP_100211207.1|1727407_1728043_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211213.1|1743819_1744437_-|thiamine-phosphate-synthase	unknown	unknown	gnl|CDD|238317
NZ_LT634361.1|WP_100211210.1|1731565_1733740_+|endonuclease	unknown	unknown	gnl|CDD|367881
NZ_LT634361.1|WP_100211217.1|1747715_1747919_-|sulfur-carrier-protein-ThiS	unknown	unknown	gnl|CDD|340451
NZ_LT634361.1|WP_100211220.1|1752023_1753433_-|hypothetical-protein	unknown	unknown	gnl|CDD|226728
NZ_LT634361.1|WP_024740463.1|1739896_1740952_-|HesA/MoeB/ThiF-family-protein	unknown	unknown	gnl|CDD|238386
NZ_LT634361.1|WP_100211219.1|1749231_1751940_-|DNA-gyrase/topoisomerase-IV-subunit-A	unknown	unknown	gnl|CDD|237192
NZ_LT634361.1|WP_024740460.1|1736146_1736557_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_LT634361.1|WP_100211216.1|1745821_1747681_-|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl|CDD|236451
NZ_LT634361.1|WP_100211208.1|1728079_1730176_-|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl|CDD|236794
NZ_LT634361.1|WP_100211211.1|1735014_1735326_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211212.1|1742899_1743664_-|thiazole-synthase	unknown	unknown	gnl|CDD|234687
NZ_LT634361.1|WP_024740462.1|1738016_1739786_-|translational-GTPase-TypA	unknown	unknown	gnl|CDD|273597
NZ_LT634361.1|WP_100211218.1|1748165_1749026_-|mechanosensitive-ion-channel-family-protein	unknown	unknown	gnl|CDD|223740
NZ_LT634361.1|WP_024740464.1|1741704_1742814_-|2-iminoacetate-synthase-ThiH	unknown	unknown	gnl|CDD|236425

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_LT634361.1|WP_100211208.1|1728079_1730176_-|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	3.3e-12	40.8	0.0

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_024740461.1|1737143_1737890_-|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl|CDD|187594	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs. This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	5.79777e-128
NZ_LT634361.1|WP_100211215.1|1745208_1745808_-|thiamine-phosphate-synthase	gnl|CDD|238317	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.	1.44639e-14
NZ_LT634361.1|WP_100211209.1|1730344_1731559_+|methyltransferase-domain-containing-protein	gnl|CDD|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	1.19702e-86
NZ_LT634361.1|WP_024740464.1|1741704_1742814_-|2-iminoacetate-synthase-ThiH	gnl|CDD|236425	PRK09240, thiH, 2-iminoacetate synthase ThiH.	0
NZ_LT634361.1|WP_100211214.1|1744429_1745212_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase	gnl|CDD|238574	cd01169, HMPP_kinase, 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate kinase (HMPP-kinase) catalyzes two consecutive phosphorylation steps in the thiamine phosphate biosynthesis pathway, leading to the synthesis of vitamin B1. The first step is the phosphorylation of the hydroxyl group of HMP to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine phosphate (HMP-P) and then the phophorylation of HMP-P to form 4-amino-5-hydroxymethyl-2-methyl-pyrimidine pyrophosphate (HMP-PP), which is the substrate for the thiamine synthase coupling reaction.	8.33803e-62
NZ_LT634361.1|WP_100211206.1|1726679_1727321_+|peroxiredoxin	gnl|CDD|239314	cd03016, PRX_1cys, Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins.	1.31734e-131
NZ_LT634361.1|WP_100211213.1|1743819_1744437_-|thiamine-phosphate-synthase	gnl|CDD|238317	cd00564, TMP_TenI, Thiamine monophosphate synthase (TMP synthase)/TenI. TMP synthase catalyzes an important step in the thiamine biosynthesis pathway, the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl) thiazole phosphate to yield thiamine phosphate. TenI is a enzymatically inactive regulatory protein involved in the regulation of several extracellular enzymes. This superfamily also contains other enzymatically inactive proteins with unknown functions.	5.3672e-58
NZ_LT634361.1|WP_024740460.1|1736146_1736557_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.98361e-07
NZ_LT634361.1|WP_100211217.1|1747715_1747919_-|sulfur-carrier-protein-ThiS	gnl|CDD|340451	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS. ThiS, also termed Thiamine biosynthesis protein (ThiaminS), is a sulfur carrier protein involved in thiamin biosynthesis in prokaryotes. It has the beta-grasp ubiquitin-like (Ubl) fold with low sequence similarity to ubiquitin (Ub), and is activated in an ATP-dependent manner by sulfurtransferases, similar to the activation mechanism of Ub-activating enzyme E1. ThiS has common evolutionary origin with Ub-related protein modifiers in eukaryotes, a beta-grasp fold as Ub, and is closely related to proteins MoaD and Urm1.	5.4293e-14
NZ_LT634361.1|WP_100211220.1|1752023_1753433_-|hypothetical-protein	gnl|CDD|226728	COG4278, COG4278, Uncharacterized conserved protein [Function unknown].	2.55721e-13
NZ_LT634361.1|WP_024740463.1|1739896_1740952_-|HesA/MoeB/ThiF-family-protein	gnl|CDD|238386	cd00757, ThiF_MoeB_HesA_family, ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). .	5.15749e-117
NZ_LT634361.1|WP_100211219.1|1749231_1751940_-|DNA-gyrase/topoisomerase-IV-subunit-A	gnl|CDD|237192	PRK12758, PRK12758, DNA gyrase/topoisomerase IV subunit A.	0
NZ_LT634361.1|WP_100211210.1|1731565_1733740_+|endonuclease	gnl|CDD|367881	pfam04231, Endonuclease_1, Endonuclease I. Bacterial periplasmic or secreted endonuclease I (EC:3.1.21.1) E. coli endonuclease I (EndoI) is a sequence independent endonuclease located in the periplasm. It is inhibited by different RNA species. It is thought to normally generate double strand breaks in DNA, except in the presence of high salt concentrations and RNA, when it generates single strand breaks in DNA. Its biological role is unknown. Other family members are known to be extracellular. This family also includes a non-specific, Mg2+ activated ribonuclease precursor.	1.16477e-42
NZ_LT634361.1|WP_100211216.1|1745821_1747681_-|phosphomethylpyrimidine-synthase-ThiC	gnl|CDD|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_LT634361.1|WP_100211208.1|1728079_1730176_-|ATP-dependent-DNA-helicase-RecG	gnl|CDD|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_LT634361.1|WP_024740462.1|1738016_1739786_-|translational-GTPase-TypA	gnl|CDD|273597	TIGR01394, GTP-binding_protein_TypA/BipA_homolog, GTP-binding protein TypA/BipA. This bacterial (and Arabidopsis) protein, termed TypA or BipA, a GTP-binding protein, is phosphorylated on a tyrosine residue under some cellular conditions. Mutants show altered regulation of some pathways, but the precise function is unknown. [Regulatory functions, Other, Cellular processes, Adaptations to atypical conditions, Protein synthesis, Translation factors].	0
NZ_LT634361.1|WP_100211218.1|1748165_1749026_-|mechanosensitive-ion-channel-family-protein	gnl|CDD|223740	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane].	6.24558e-30
NZ_LT634361.1|WP_100211212.1|1742899_1743664_-|thiazole-synthase	gnl|CDD|234687	PRK00208, thiG, thiazole synthase; Reviewed.	5.07046e-157

Protein sequences

>NZ_LT634361.1|WP_024740463.1|1739896_1740952_-|HesA/MoeB/ThiF-family-protein
MDLTTEERKQYNRHLILDKIGVEGQLKLKNAKVLVVGAGGLGCPILQYLTAVGVGTIGVIDNDTVSQSNLQRQILYTINDVGISKAVAAVKRLSQLNPFVKFNTYNEQLTIQNAISLFNAYDVVVDGSDNFSTRYLTNDASIITDTPLVYGAIFKFEGQVSVFNYKGSATYRCLYPVPPKPEASLNCSEIGVIGVLPGIIGSLQANETIKIICELGDVLANKLLMYDTLTMRQMILNFKRVESSQVDALEQDYDLFCGIDNSNEEITLEALEKNKNKYHLLDVRETSERKEYDIGGQHIPLGEIIERMKEIPKNKNIVVYCKSGGRSKRAIQALIENKYEGKLINLKGGCF
>NZ_LT634361.1|WP_024740462.1|1738016_1739786_-|translational-GTPase-TypA
MQSIRNIAIIAHVDHGKTTLVDKIIDQAKILDDRKERTDLLLDNNDLERERGITILSKNVSVNYKDVKINVIDTPGHADFGGEVERVLKMADGVLLLVDAFEGPMPQTRFVLGKAIELGLTPIVVVNKVDKENCTPDLVHEKVFDLMFALEATEEQLDFTTIYGSAKNGWMSTDWQEPKEDIVDLLDAVIETIPEAPYREGTPQMQITSLDFSSFTGRIAIGRVFRGDLEENKDYMLCKADGTTKKVRIKELHVFEGMGKAKVAKVRSGDICAITGIEGFEIGDTIADLENPEALPRIEVDQPTMSMLFTINNSPFFGKEGKFVTSRHLRDRLFKEMEKNLALRVDETDTEDKFNVFGRGVLHLSVLIETMRREGYELQVGRPQVIIKEIDGKKHEPMETLSIDVPEEVASKAINLVSLRKGDLLVMEPKGDLQHLEFTIPSRGLIGLRNKILTATGGQAIINHRFSEYGPYKGDFTEDLKGAIVSSETGKATAYAIDRLQDRGRFFIDPNQEIYKGQVVGENSKQDDMAVNLIKGKKLTNVRASGSDDGVKIAPKIDFSLEECMEYIRGDEYLEVTPESLRMRKINFR
>NZ_LT634361.1|WP_024740461.1|1737143_1737890_-|3-oxoacyl-[acyl-carrier-protein]-reductase
MKLLENKTAIITGASRGIGRGIAVEFAKQGANVAFTYSASVDAAIALENELKGLGVKAKGYQSNAADFDAAQELAKTVLEEFGTIDVLINNAGITKDNLLMRISEDDFDKVIEVNLKSVFNLTKAVIRPMMKQRKGSIIHMSSVVGIKGNAGQANYAASKAGILGFSKSVALELGSRNIRSNVIAPGFIETEMTAKLDEKIVEGWRNEIPLKRGGTPEDIANACIFLASDMSAYITGQTLSVDGGMST
>NZ_LT634361.1|WP_024740460.1|1736146_1736557_+|helix-turn-helix-transcriptional-regulator
MVNSTEIILRLKQVLDYYKLTSSSFADTIDIQRSTMSHLLSGRNKPSLDFVLKVVDKFPEVNLYWFLKGKGKFPSMEQDVIDRNPPSLEETPSLFSHEAPIDLPSIPQKKGKELIKIILLYNDGSFENFDNNTFPI
>NZ_LT634361.1|WP_100211211.1|1735014_1735326_+|hypothetical-protein
MEIVVFTVVLNQQRSALFHKAKFGVRKAFLICFEMATSTKGLSASYMGACYEISQAIARIFMYKVREIMPSNSNHLMDGDVHINEFVIGGKKSCYSSSANKRS
>NZ_LT634361.1|WP_100211210.1|1731565_1733740_+|endonuclease
MVKKLLTALLIVASVSITVAQQAYYSDVDLTLTGAALKEALALKIKSTHTNLLSYTPGVWEASKITDANPDNPSEVLLIYGWEDGSDSEVDNDRVRSGNLQDSGNGDLLVWNREHVYSKSLATPKLETGSPGAGTDAHNLRPADKTRNSTRNNYRFGDGSGNSGFSSVTYVGPNGPNTNAWYPGDEWKGDIARMVMYMYLRYETQCLPSGVGVGSSEFTDDEMIDLFLKWNAEDPVSDIEKARNTYHGNTANTYAQGNRNPFIDNPYLATRIWGGDTAQDLWGIYTGSDTEAPTVPANVVVSNETTSSIDVSWDPSTDNVGVTGYEVFLDGNLIKTTPNTTMSITGLTPNTTYGVTIVAKDLINNKSAASNVVNGKTLEDTEAPTVPIGIVVSNQTDSSFKITWTPSTDNTAVTGYEVYVDGNLKTTTTNTTYTVTGLTISTTYSVNLLAKDGANNKSAQSATVNATTTDGASNGADELFFSEYVEPDGGNNKALEIANITSRTIDLAGYTVKRQSNGSGDWKDELDLSSGTTTSIVPGEVFVIINGGASNQKLIDEADLVVSSNFGAPVNFNGNDAVGLFKNGVLIDIIGVFNSSDNYAKDITLRRKSNIAAPNTTFDLQGEWDTFAGNTFDGIGTHSSTLSTKEFDKSIFNVYPIPAQNSLFVKTSSNITIDKFSIYTIRGKNVLNVYNPSNRINVSHLNQGIYILKIRSGNKFSIKKFIKR
>NZ_LT634361.1|WP_100211209.1|1730344_1731559_+|methyltransferase-domain-containing-protein
MRLHRNLTYAVIDSLRDVFNEGAYANKAVEKALKRDKRWGSRDRKFVAETIYEIVRWKRLYAEIANVKEPFDRPNLWRIFSVWCVLKGIPLPDWNQIEPTPTRRIKGKFDELSKIRKFRESIPDWIDEIGASELGETIWTKEMAALNKQAEVILRTNTLKITRDNLQKQLRTENVITEKLPNHPDAIKLVERANVFKTEAFKKGDFEVQDASSQLVAAYLDVQPGMKVVDTCAGAGGKTLHLASLMENKGQIIAMDIYESKLKKLKVRARRNGAHNIDLKVIDSTKVIKKLHQKADRVLIDAPCSGLGVLRRNPDSKWKLEPEFMDRIRTTQQEVLQQYSKMVKPAGKMVYATCSVLPSENQKQIEFFLASDAGKDFSFIKDEKILASTSGFDGFYMALLERKK
>NZ_LT634361.1|WP_100211208.1|1728079_1730176_-|ATP-dependent-DNA-helicase-RecG
MNLQKPITYIKGVTINRAELLYTELGIKTADDLLNFFPFRYIDKTKFYTIKELENNNSEVQIVGKITGIKTVKQKKGSRLVATFSDATGTIDLVWFKGVKWIKDSLKINTLYVIYGKLNLFGSRYSMPHPEMELVAEYKKKLQMAMQPVYPSTEKLTNKGVTNKVIRSLMQNLFQQTYAGIAENLPAYLLEKEKLIDKKEALLNIHFPKSQELLAKAQYRLKFEELFFIQLQLLQKKLIRKSKIKGYSFSEVGEKFNSFYKNYLPFDLTNAQKRVLKEIRKDVGSNAHMNRLLQGDVGSGKTIVALLTMLLALDNGFQATIMAPTEILAIQHYNGIKELLEGMDISIELLTGSTRAKKRREIHGNLETGGLDILVGTHALLEDKVRFHNLGIAIIDEQHRFGVAQRSKMWQKNELPPHILVMTATPIPRTLAMSVYGDLDISVIDELPPGRKEIKTVHRYDSNRLAVFKFLKDEIAKGRQVYIVYPLIEESEAMDYKDLMDGYESVAREFPPPHYQISIVHGKMKPADKEYEMNRFINGETQIMVATTVIEVGVNVPNASVMVIESSERFGLSQLHQLRGRVGRGAKQSFCILLSSYKLSSDGKTRLQTMVDTTDGFKIAEVDLKLRGPGNIMGTQQSGILNLKIADVVKDTPILQSARKVAIEILQKDPDLSDPENIPIAKTYTQLQKKSGLWSKIS
>NZ_LT634361.1|WP_100211207.1|1727407_1728043_+|hypothetical-protein
MKNIRPLSILLFMSLLFIGCAVKKEKTVLTTTKAYISPKLNSERIKIKYGNYGVDVLKATSLLRVSNLYSLHKNKKITRTLAFVEYPKQINQAFLKEHSRIINGASIGSTFKQSNWIIKKKHLLFSEIFPSVNYTGLYKLMGGIAPSKLAIHTYKFTIEKEGKTYLYAIISEIHHPDYLSLTALKKNYGNLECFDAVLLAKKNKLIEKKQH
>NZ_LT634361.1|WP_100211206.1|1726679_1727321_+|peroxiredoxin
MNTIRLGDEAPNFTAQSTEGEINFHNWLGDSWGILFSHPADYTPVCTTELGTAAKYKAEFDKRNVKVAALSVDGLDSHIGWVKDINQTQNTTVNFPIIADEESKVANLYDMIHPNADSKLTVRSVFVIGADKKVKLMITYPASTGRNFDELLRVIDSLQLTSYHKVATPANWNNGDDCVISPAVTNDEIPSLFPKGHKEIKPYLRLTPQPNLN
>NZ_LT634361.1|WP_024740464.1|1741704_1742814_-|2-iminoacetate-synthase-ThiH
MKTFKALFDTYNWNEVLESIYTKKERDVISALSKDRCNIEDFKALISPAGTAFIEQIAQKSHMLTKKRFGNTMQMYAPMYLSNECQNICTYCGFSLTNKIPRRTLTDQEILEEVAFLKKKGYDHILLVTGEADKTVGVTYLKNAIALIKSQFSNITIEVQPLEKEEYELLIENGLYAVLVYQETYHEAAYKKHHPKGRKSNFEYRLATPDRLGKAGIHKIGLGALLGLEDWRGDSFFTALHLKYLQKNYWKTKYAISFPRLRPHSGGIAPKIEMTDTDLVQLICAFRLLDEDVELSMSTRESEVFRNHIIHLGITSISAASKTNPGGYAVAPQSLEQFEISDERSTEDFVSMLKSQGMEVVWKDWEQFA
>NZ_LT634361.1|WP_100211212.1|1742899_1743664_-|thiazole-synthase
MLQIANKKFSSRLFTGTGKFSSSQWMEEALLASESELVTIALKRVDLEDKSDDILMHLNAPKMNLLPNTSGVRTAKEAVFAAELSREALATNWIKLEIHPDPKYLLPDAIETLKAAEALVKLGFVVMPYIHADPVLCKRLEEVGVQCVMPLGAPIGTNKGLKTLDFLEIIIEQSKVPVVVDAGIGSPSQAAHAMELGADAVLVNTAIAVSENPVMMAKAFKKAVIAGRMAYEAKLGVISRHAEGSSPLTNFLYK
>NZ_LT634361.1|WP_100211213.1|1743819_1744437_-|thiamine-phosphate-synthase
MIDRLQYITQGKTPEEHLENLQKACISGIEWVQLRLKNFDDNVVLETAKRAREITNFYHVKLLINDHYKIAKLVKANGVHLGKLDACPLEARAYLENWQLIGGTANTLDECRALLVKGVSYIGLGPFRFTQTKANLSPLLGEEGYKTILKNITTTTPIIAIGGIQQHDIPTLMNTGIHGIAISREITLDFNKISIFKQILKRQED
>NZ_LT634361.1|WP_100211214.1|1744429_1745212_-|hydroxymethylpyrimidine/phosphomethylpyrimidine-kinase
MKRKQYILTIAGLDPSGGAGITSDIKTFEAHNAYGLSVCTAITVQHDLSFKSCTWMAKNLILSQIDILFERFTINVVKIGIIQSWEFLLEVVQKLKELKKEVKIILDPVLKASTGFDFHHKAPKKILEEVLANCYFITPNYEEIKTILPEKNIAETIRFISQKTNIYLKGGHRIDKKGWDEVYYDSTLSLLLPPVVETVFEKHGSGCVLSAALACNLAKGYALEDACRNTKSYIDEFLSSNQSLLGTHTYKNVLKAQYHD
>NZ_LT634361.1|WP_100211215.1|1745208_1745808_-|thiamine-phosphate-synthase
MIVLISPEEDIVNELVILHQLFEEGVTHYHVRKPRKTREAYIAYLKAIDKKYHKRIVTHHFHELAAIFDLKGIHFQEKRRRELLKNEREYFKKISIGNKIMSSSFHELEALINCPIKFDYHLLSPVFSSISKVGYKGRNFDVSTIDKRIVGVGGIHKGTIKQAIRLGFKGIGILGGVWSESNPVASFKEMKAIYNSEKQ
>NZ_LT634361.1|WP_100211216.1|1745821_1747681_-|phosphomethylpyrimidine-synthase-ThiC
MKKKNTAPSQAGITRQPFPSSKKVYVEGKIYPQIKVAMREILLNDTVDAITKKRTPNESVTVYDTSGPYTDANKEINIHNGLERIREPWILQRGDVEQLHTFSSKYAHERLKDEGISHLRFNHLKRPLKAKKGKNITQLHYAKRGIITPEMEYIAIRENQRIDEMTRLSKQHLGQNFGASIPNKITPEFVREEVAKGRAVIPSNINHPEAEPMILGRNFLVKINANIGNSATTSSIEEEVEKAVWACRWGADNIMDLSTGKNIHETREWILRNTPVPVGTVPIYQALEKVKGVAENLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPMTAKRITGIVSRGGSIMAKWCLAHHKESFLYTHFEEICAIMKAYDVAFSLGDGLRPGCIADANDEAQFAELETLGELTKIARKHEVQCFIEGPGHVPMHMIKENMDKQLEVCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVRTGVVTYKLAAHAADLAKGHPGAQHRDDALSKARFEFRWEDQFNLSLDPELAREYHDETLPAEGAKIAHFCSMCGPKFCSMKISQEVRDFAAKNKVNDEEVFAKGMEAKSKEFKDSGSEVYL
>NZ_LT634361.1|WP_100211217.1|1747715_1747919_-|sulfur-carrier-protein-ThiS
MITIKVNQKEYQISENLTLETFVKDLKIESSGIAIAVNNVIITKTNWSLQLLQSNDDILIISATQGG
>NZ_LT634361.1|WP_100211218.1|1748165_1749026_-|mechanosensitive-ion-channel-family-protein
MIKIGAFTYELDSFWSIFFYCLFVVFVSWLISRATRYGIVQYLKAKKADKYGRTSIQFFRNSIKFFIGLFAFIYIILTVPLFRSKATLIFSGAGILAAILGFAAQAAISNLIAGAFIVMFRPFRVGDYIKLDENRLGIVEDITLRHTVINNFENKRLIIPNSVISTESVLNHTIEDSHILSFNNFKIGIKGDIDLARKIIQEEAQELEFVIDNRTPEQVLKDEPQIEVRLIEVLDGYIHLRAYIWINNPFKEFKIKCMLKEAVYKRFVAEGVDLPIPITKFIKITP
>NZ_LT634361.1|WP_100211219.1|1749231_1751940_-|DNA-gyrase/topoisomerase-IV-subunit-A
MSEEINEQEEHDEEMNHQSDSVETITKVTGMYKEWFLDYASYVILERAVPSIEDGFKPVQRRIMHSMKDLDDGRYNKVANIVGHTMQYHPHGDASIADAMVQMGQKDLLIDMQGNWGNILTGDRAAASRYIEARLSKFALEVVFNPKTTEWKMSYDGRKKEPVDLPVKFPLLLAQGAEGIAVGLSTKILPHNFNELIEASIKYLKGRSFTIFPDFQTGGIADFTNYNDGKRGGKVRVRAKISQIDKKTLAITEIPFATTTSSLIDSILKANEKGKIRIKRIEDNTAANVEILVHLPPNVSPDKTIDALYAFTSCENSISPLCCIIEDNKPLFIGVTEMLKHSTDNTVELLKKELEIQLYELEEQWHFASLERIFIENRIYRDIEEEETWEGVIQAIDKGLAPHITHLKREVTEEDITRLTEIRIKKISKFDIDKAKQHIESLEEKIAEVKHHLEHLIEFAIDYFKNLKSTYGKGRERKTEIRIFDDIVATKVVMRNTKLYVNKEEGFIGTSLKKDTYVTDCADIDDVIIFKSNGTMLVTKVASKTFVGKGIIHIAIFKKKDKRTVYNMIYKDGKNGPSYMKRFNVTSITRDKEYDLTNGNKGSAILYFTANPNGEAEVVSINLRAVGSIKKLKWDIDFADLAIKGRGVRGNLVTKYAVKKIEFKSEGVSTLKPRKIWFDEAVQRLNVDGRGTLLGEFRAEDKLLIATQSGKIKAVKPDLAMHFEQDMIVLEKWEPNKPISAIYFDGDKARYYIKRFLVEITEKEETFISDHEKSQLEIIATDYRPMVEVIFSKRSLEKMNVSIEEFIAVKGIKALGNQLTKEKIRQVNILDPLPFEVPKEAVKDNIEAKKEVIEDKLPLEVAPIEKRAVESKEEKVRRALERAIQKKKIKREEREDNQETLF
>NZ_LT634361.1|WP_100211220.1|1752023_1753433_-|hypothetical-protein
MEKEKKELWKKVKKFELEKVYEEYGFLTRLSLENGWTIRFTEDAVLEYKKFMFLAAVSNEMVSPSDIVDTVWHLHLTFSKSYDMLCEILGKKIYHIPATTGKRSEKKSLEKAKEDTLKVYEEYFGTRNEMIWEMKEFEEVIGIKPIDKEYEYIDNGKLILLGGLLLIPVFFIWKPLLLKIGNPTFFIVLAVFLLVILLLIEEITDDSFRTLYRSLDNFYIKKLHKYELIAFIENSIGKLVTYKIDDLLHRNSLKLSEDTPQRIILEKTFPNNDTYERCVINQFKELPYESFSKNKEFIVGKPAFLNIENTVSLLRDKLLKSEKILENTLMISGLLFIFYSFVFSRLILGVLRGKAVSYLVFFIIFSICLVYSYLKNIYSRNLKKYLIQFFKFREKEIDKDSYLEKIINNQEIVLGASMTTVLFANKLNIADDDSSSFISSSCISKNSDSSNSSSSSCSSCSGCGGCGGG

Crispr_ID: NZ_LT634361_5

• CRISPR_ID: NZ_LT634361_5
• CRISPR_location: 1897337-1897428
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_LT634361_5

Consensus_repeat	Method
CTAAAAACATTAGATATCTCTAAAAATAC	CRISPRCasFinder

spacers of NZ_LT634361_5

>5.1|1897366|34|NZ_LT634361|CRISPRCasFinder
AGAGTTAGAAACCTTCTTCTGTTCATATAATGCA

CRISPR arrays and Neighbor proteins around NZ_LT634361_5

CRISPR arrays

The CRISPR arrays of NZ_LT634361_5

>merge|NZ_LT634361|5|1897337-1897428|CRISPRCasFinder
CTAACAACATTAGATGTTTCCGATAATAAAGAGTTAGAAACCTTCTTCTGTTCATATAATGCACTAGAAACATTAGATCTTAGTCAAAATAA

>NZ_LT634361|5|5|1897337-1897428|CRISPRCasFinder
CTAACAACATTAGATGTTTCCGATAATAA	AGAGTTAGAAACCTTCTTCTGTTCATATAATGCA
CTAGAAACATTAGATCTTAGTCAAAATAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C	unknown	unknown	gnl|CDD|273954
NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319849
NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase	unknown	unknown	gnl|CDD|222853
NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein	unknown	unknown	gnl|CDD|378240
NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380294
NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin	unknown	unknown	gnl|CDD|381257
NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein	unknown	unknown	gnl|CDD|235167
NZ_LT634361.1|WP_159254639.1|1889841_1890156_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein	unknown	unknown	gnl|CDD|225248
NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|380191
NZ_LT634361.1|WP_157926231.1|1892840_1892996_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|274377
NZ_LT634361.1|WP_100211295.1|1915477_1915984_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|224523
NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl|CDD|235392

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C	gnl|CDD|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase	gnl|CDD|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.63086e-13
NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.27474e-30
NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin	gnl|CDD|381257	cd08916, TrHb3_P, Truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 3 (P). The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. They are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). TrHb3s include Campylobacter jejuni Ctb, encoded by Cj0465c, which may play a role in moderating O2 flux within C. jejuni.	5.52809e-48
NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase	gnl|CDD|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	9.63696e-15
NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein	gnl|CDD|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	1.25652e-32
NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.15999e-34
NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein	gnl|CDD|235167	PRK03854, opgC, glucans biosynthesis protein MdoC.	6.30732e-37
NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	5.81308e-08
NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein	gnl|CDD|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.78732e-157
NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase	gnl|CDD|274377	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family. Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted. [DNA metabolism, Restriction/modification].	2.44397e-07
NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	2.38177e-18
NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	0.000940512
NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase	gnl|CDD|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	5.81296e-31
NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl|CDD|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0

Protein sequences

>NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein
MKKHVLILLCFLPFLNGFARTNCNEEQKITSFRNASFKTFSALHKSVNINNNSQIQNPKTNELLINNKQTEITASSFKKAQQYNLTIDTNNGGSITMKVNGAVLAPYPYPTNAVFDENTEVTLNASPSNGYEFVEWIGDVTGNTSSLKITMDSDKKVTAVFKKAQQHTLTADVSNGGSLIIKVGNVVTNPYPYPTKVVFDHNTEITLNANPNNGYEFVEWTGDVTGNTNPLKITLDSDKNITAVFKKTANVLTLNASNGVIAVTANNLTQTPTKYPISGNFPPNTMVSLNAKPSNGYKFVKWTGDITVNTPIATIKMDGDKNVTAVFEKDATPVVYIPDANFKEILIGKQLINTNNDNEIQVAEAEAYSGVIYVSGEGKSESKKIKDLTGIEAFKNLVELDCSYNRISYLVLSNNPKLKIVNANNNQIFYTGLFSCTELKELKIETNLVPNLDLSENTKLEVLQCSNNSLQELSAPNSPILNILTCSNNQLTTLDTSNNPNLSSLKCNGNLLTKLDISNNTNLETLNCANNNLSNLNINIGHLLNNFDATNNPNLTCIEVDDINAIPAPWYKDAIAQYSTNCNATAGVDDIFTSKLSIYPNPVNNLLRITKNQHQDIKNVHIFNMVGQKILQTDELTINCSELSKGVYILKVESTDHKTGIKKFIKN
>NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator
MIHNELLLKYGAKTQEYTKNKIIFSENEYAKNYYQIISGAVKMSNFNDDGKEFIQGIFYKQQSFGEPPLFINVTYPANAITLVKTTLFILPKKALLQLLYAQPEIHLNITKSLANKLYYKAIIASEISNQEPTHRIIRFFDYLKNDVHHINGSFNFKVPYTRQQIADILGLRVETVIRTIKNLEQKKALKIINRKVFW
>NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin
MELKEIENREDIYILVSTFYDKIKKDEFIGPIFLKMISANEWSHHLEKLTDFWETNLFFVRKFKGNPVKVHQHIDIVYNYSITQKHFGKWLELWCSTVDELFEGRKAIEAKERARNIAFMLFMKMFKEKPKETN
>NZ_LT634361.1|WP_157926231.1|1892840_1892996_+|hypothetical-protein
MNTQLIASNEITSRNNTLSKLIYWMGGFIYKGEGNSMEISIRLIMLDMVIT
>NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein
MNPKITTKTTKNKKPVLAVAIDNSLSIKHFKETEKAKKIVEEFKKSKALNSKFEVNYFAFDEDIKTLDSLSFDKNQTNISQAIQSINNLYENDLGAIIMLTDGNQTIGNDYEFIASKQSIYPIALGDTTAYNDIKIARLNVNKYSYIKNKFPVEVMLYYEGKEKVTTKFSIYRNEKNIYSEKIYFTPQNNTKTIRVNLISLKEGIGYYKAVVGEISKEKNTKNNYKNFSVEVIDEQLKIGIVSSINHPDLGALKKAIEVNKQRKVEILDLSKKNNYKNDYQLLILYQPNNKFKNLFEWLNAEKLNYMIVSGAQTDWGFLNKQQSFFTKNTIQKLERYGGGYNDRFLTFQQKNIGFNGLPPLQDKFGEITAKGVFQPLLFQKISGILTKQPLLATFEENNQKITALFGEGIWRWRASLFRKENTFEEFDAFIGNIVQYLSTNKKRARLEVEGENLYPANSVVNISAFYLDKNYQFDNRASLQLTLTNKATKSIKRLPMSLVGNSYQVSIESLAPGNYSYQVSVANQQLKVYGRFKITDYEVEEQFVNGNNKKLKALGERTKGKLFYPSQVVGLKEKLIADRSFYTTQKEIKTTQNLIDWEWILLFIATLLATEWFIRKYYGKI
>NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase
MKFHTRKWVKPEDLNPNGTLFGGRLLQWIDEELGIYAIIQLEIPRTVTKFMSEIDFVSSAKQGDIIEIGIEVVAFGKSSITLRCEVRNKLTHKTIIEIDKIVMVSLGADGKPIGHGKTKVEYVKDRLKK
>NZ_LT634361.1|WP_159254639.1|1889841_1890156_-|hypothetical-protein
MTLLLLVPPVQAHADTIVFENTSEVHFNSLEKGHHQKHHQHDTEEERNTDHHHHCTIVGVSSAIITPNFSFQFVRFSQARKRIHFYKELNASSFLDELFQPPQI
>NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MLDSIIKFSIKNKLIIGALIVMLIGMGVYSLKQLPIDAVPDITNNQVQIITSAPSQSAQDIERLVTFPIEMTMSSIPKIEEVRSFSRFGLSVVTIVFEDNVDIYWARQQINERLGEAKSNIPEGIGSPEMAPVTTGLGEIYQYTLFPKEGFEKKFSAMELRSIQDWIVRRQLLGLEGVADVSSFGGLLKQYEVAVQPERLQTLEVSINEVLEALSKNNQNTGGAYIDKNPKAYFIRSQGLVKTPEDIENVVVKNAANGTPILIKDIAKVQLGSAIRYGAMTRDGKGEVVGGIVMMLKGANSSKVIKRVKDRVAQIQASLPEGVEIKPFLDRTKLVNKAIKTVATNLVEGALIVIFILVLLLGNLRAGLIVASVIPLSMLFAVILMNLFGVSGNLMSLGAIDFGIIVDGSVIIVEATLHYLGLKKSGVKLSQEEMDEEVYNSASKIRTSAAFGEIIILIVYLPILALVGIEGKMFKPMAITVSFAILGAFLLSLTYVPMISALFLKKTITNKVTISDRIIMAIQKKYTPLLEFVLNYKKGVIIGVVLIFALSIFTFKNMGSEFIPSLDEGDLAVQANVSTGSSLSYTIDVTNKSSQLLKKEFPDEIEQIVSRIGSSEIPTDPMPVEIADIIIILKDKSQWKKATTKNELTEKMNALLSQNMLGVSYGFQQPIQMRFNELMTGARQDVVLKIYGEDLDKLVKYANELGGIIPTVKGAEDLYIEKMTGLKQIVIDYNRSQLAFYGLNISDINRAINTAFAGQSAGAVYEGEKRYDLVVRMPKERRGNIEDVRKLYITTPNGTKIPLESVAKVTFKAGPNQIQRDDAKRRITIGFNVRGRDVASIVNELKLKVSKKMKFDPGYYITYGGTFKNLEEARARLGIAVPVALLLIFLLLYFTFNSIKQSILIYTAIPMSAIGGIFALWLRDMPFSISAGIGFIALFGVAVLNGIVLIAEFNRLKAQGITEVKEIIRKGTAVRLRPVIMTAAVASLGFLPMAISSSAGAEVQKPLATVVIGGLVSATLLTLLILPVLYMIFEEGKGIKIRFKKLTTVVALLGVFFAQAQEQPKTLSEEQVVSLSLEKSVKLNSSKLNITKNKMEIPKSVDLEPASVRYQDIGTMSGVSEKEWGLSQNFGGILTHIQKRKLALAKYDLSKLSNKISEKEVIRNAKSLYQEWHYLYGLVKLMEEQQKNTNLIKGIAKKLYDAGEIGGLENDLTNLQSLGVQSQKNKIYKDFIRVENALKEMLQSKEAIVPLTKYPAKKKPLIQQDSLSELFEAILGKQDMVAKKKISVARSVYFPELTAGVLKRRLSEMKDTYRGFTVGVNIPLSFWSNKAKIKQQKIAREELAYVNKSKKIAIQNNFKSLKEQLQYLEEELVSIENTVIKVNKFIKKLQLAYTSGEVDAYKYNQSFNTYFQVMQNYLSLIYNYNQTVIAYEFYIKE
>NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKIIILAVTAIFIISCNLKGGDHSDHDHAAEEGVPNSKKESKEEHNENELHLTKEQLIAAGIQSEEITKREIRNRVAVTGTIEVPPQSKATIYAPLEAFVHKTNLLPGDKVTKGQIIAVLQHPNFIELQYAYLEAINKRNVAQADYKRKKMLLENEIASKKSYQIVEGAYRSAQSLVDSYKEQLKLAGLSPDKIVTKGIQQYVEVKAPISGYVVENNLNKGMFLAANSEMMEIIDNDHMHAELNVFGTDITKIKKGDEFIFKPSGVDVEYKGAIQLISQKVNEKTKTVNVHGHFEDEENRLKSGMFINAEILLKGREVFTVPENALIEKGDEYFVFMAESKTEFIPLEVTIGNSDKGFVEVKAIQGDNFNIRVVTKGAHFLKGKLLQQSGGMEGHAH
>NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase
MSEKHLKAKEHDHSHGGIFGESTELYFAILSGFFFFLGVVLEKLTDVQEIYTLGSFVIAFFFGGWFTTKEAIEKIRKGEFEIDFLMLIAALGAAYINKWEEGALLLFLFSLGHSLENYAMGKAKKSIEALGELSPKKVLVKRGETTAEILIEELKLEDIIVVKPNTKIGADGVIIKGHTSINQASITGESMPVDKEAIQEEVGNLKFEEIDKRNVVYTGSINGDNLIEVLVLKLNEDSTISRLIKMVNEVETKKSPTQLFTKKFEKWFVPIVIVLVFLLCFAYLVIDESFEQSIYRAITVLVAASPCALAISTPSAVLSGVARGAKGGVLIKGGRALEDLGSLTTIAFDKTGTLTEGTPRLTNIITVNNTDKETLLELVLSVESLSNHPLAKAISKEIITKYATVNRGEVSNIEAFQGMGIRAIYREKEAFIGNLHLMETKAISISEEVREMMKGFLEGGNTTMLVAYNKKLIGILTVMDTPRKFAKETLQSLKKLGIKKMVMLTGDHQNVGEAIANEIGLSEVRGGLLPEEKVSAIQQLQKKNTKIAMVGDGVNDAPAMASSSVGIAMGAAGSDVALETADIALMSDKIEKLPFVIGLSRTSKIIIKQNLWMSLGVVALLIPATLFGVASIGPVVIIHEGSTLLVVLNALRLLRFKED
>NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein
MKKNNQLLVLTHLSQLLDFVTGIGGFVVPLILWVSTKDEILHMDEHGKAILNFRITMFIYFLICIPLILFFGLGIVGFLVLWVFYMIFPIINAIKASNDQMPNYPFTITFIS
>NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C
MKKDYFFKGIYCCINNGLTYFRKHPIKIIIVSISIIAYYYCLPRKLFEVPTSTVVTAKNHELLGAVIAKDGQWRFPEVASVPKKFEICILKFEDAHFYWHFGFNPISIGKALVENIKAKRVVRGGSTISQQVIRLARNHKKRSYAEKIKELLLATRLEFRYSKEEILKLYASHAPFGGNVVGLEMASWRYFGLQPDQLSWAESATLAVLPNAPSLIYPGKNQERLKRKRNRLLRKLYEAAAIDSITYMLAIEESLPQKPFDLPTIAPHLVQEIAKKHEGKYVQSSIDIHTQKQVNSLVQQHYFRQKQNEVYNMAVLVLEVATRKIVSYVGNSPTDKAHQKDVNNVIAPRSTGSTLKPFLYAEMLQSGDLLPTQLIADIPTEIAGYSPNNFDLTFDGAVHANEALTRSLNIPAVRMLQTYGLEKFREHLRRYKIQDIDKSADYYGLPLILGGAEASLWDLCKTFAAYAGIVNHYKSLQYHYYEKEFVTPSYKHTDTVNFGAIKKENNDIDAGTAFTVLEVLTEVNRPYTDQAWKYFDTSQKVAWKTGTSFGNKDAWAIGTTPKYVVGVWVGNSDGEGRSDLTGVGSAAPLMFDVFDVLPKSTWFATPYEDLVAARICKQSGYLALPICEWELRNIPKNGVKGKSCPYHRQITVDSTVQYQVHSNCESVSKIKVLPWFVLPPLIAHYYQQKNTDYRELPSYRNDCVGIAGRNTMDFVFPTKNSSKIFLTKNEASQINPVVLKLMHTDAEAKVYWYLNDEFIGVTQHYHEQAIQPEKGNYKITVIDDFGNEKTRFINIE
>NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein
MKKTMKLLSILLLVFISNACKKTTATESNIHAYSEYITMYPEKMISVVPKLDFFLKKELREATIAEDVISISPKVEGEVLFRDQVLSFIPKEKLKSNALYTITLHLSKLYEDISPDLKDFTIKVKTKELLFNVALESPTVLTKDWYAVTGVLTASDVIDTAKLGTIITANYEGKPKKIIFETFEPLASKVHFKIDSLQRFEENKDLKVSWSGVEIASASEGTRELTIAGKNNFKILDIEVVNDDKQYIEISFSDPIKKAQHIKGLIQLTNTQKRKFTYGIKKNIVTLYPRASFKNNVTIEVFKGIQSIGGYTLKNNYSKTLYFEQLKPSVSFINSGSILPNSSNVKLNFKAVNLKAVDATVYKIYKNNILQFLQTNNVNNQGSLNYVGRPVAKYTVNLSNQGLDLDKENVFAIDLSEITTIEPGAMYRVALSFNEAYSNYVCDQKAPKTTIIYGKKEIATENYDRISYDDEYYDTYDWNERDDPCTASYYYDKKISTNILATDLGVIVKKGSNATTFVAVTNLLTTAPEEGAKVTLYNLQQQPIKTSQTNKEGVAIFEGISNAFFAAITKENSTTYVKLNDGNSLSMSKFDVSGVKLQKGIKGYLYGERGVWRPGNQLFLTFVLNDKANPIPEKHPIKFELLNPQGKLIHRKLLYKNKANVYAYAPKTNENALTGNWKLRVSVGGAVFQKTLKIETIKPNRLKIQFSMTEEEEFIKANSSMKGKVVVKWLHGAIAKDLKIDINGKFRQTKTVFSTFKNYNFDDVAKRFGTEEFRVGEGTLNEEGLATFSVKPKLNRGAPGMLKASFITKVYENGGDFSTDVFSKKVSPYTSYAGLLNAEEQQSKNYLFTDENYTFNVVSVNEKGVGIPNTLRVQIYKLSWRWWWNTTNDGLSNYDGTNYHEPYKTVTVTTDANGKGAFDLKVDKNDWGRYLIKVLDRKSKHVTSNVAYFDWPSWYGKKRGSQDKTNATMLVCTTDKESYKIHETATIKFPSSEGGRALITIENGTQVLDHFWVTTTAQQTTFNFPVLPTYTPNVFVNISLLQAHHQTENDLPMRMYGTIPMEVIDETTKLTPEIKMAEELQPETIATLEVKEKEGKPMTYTIAVVDEGLLDLTRFKTPNPWNTFYAKQSLGVKTWDIFDDVIGAYGGKVNQILSIGGDESEAGSKNKKANRFKPMVRYLGPFTLKEGATKKHHIQIPKYIGAVKAMVVAANTDKEAYGSSEKTAFVRKPVMILASLPRKITPQETVTLPVTVFAMKPSVKRVAVTVQPDASYTIISNASQELSFNEPGEKMAYFKLKVNDFKGIGKVKVIARSGSEKASYEVAIDVLNPNPITTEVKDMVLKSNAENELYFTNFGTKGTNAISVELSTLPPMNFTKRMEYLIQYPHGCVEQTTSSAFPQVYLPEIFELSEEKQQAIERNIKATIQRLSDFQLSNGGLSYWQGGSSADSWGTSYAGHFMIEAAKKGYALPIGFKTAWIGYQKERARSWRNNNSYDNNALSQAYRLYTLSLANSADLASMNRLRSTNGISNEAKMRLANAYAIIGKEPIAKAILRTLTTKNYAKRRYSNYGSEMRNRAMALETYTLLQNETKAIKLAKIIAESLSSEAWMSTQTTAFSLLAMSKYALKNGGAEGINASYSLNGTSKKVRISKALYTQDLKGSQKENTFKAINHGTGVLYVRVFHKGILPVGSEKVMQNNLETSIVYKTKEGASMLPTRIAQGTNFIAEITVKNTTNKHIKNVALTTLIPSGWEIINTRFTDFGNHTSTSKVDYTDIRDASIRNYFSVRSHQTKRFQVLLNASYLGRYYLPGIQVEAMYDNDYVARTKGQWIEVIN
>NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MIQNDTIIALATPAGVGAIAVIRLSGEKSIEIVNSFFKSVKKEKSLLLQKTHTLHLGHIVNNGVVLDQVLVSIFKNPHSYTGENVVEISCHGSSFIQQEIIQLFLKNGCRMADNGEFTMRAFLNGKMDLSQAEAVADVIASNSAASHQMAIQQMRGGITNELKVLRTQLLDFAALIELELDFSGEDVEFADRSKFKELVAKITLVLKRLIDSFAFGNAMKNGIPVAIIGEPNVGKSTLLNTLLDEEKAIVSDIAGTTRDAIEDELVIHGVAFRFIDTAGIRETKDFVENIGIKKAYEKAENAQLILFLIDAHKFIDSSEEFLQEIKVIKKRFPNKRLLVIANKIDTLSCHDTAILQSEIDHLILLSAKQKTGIEALKSHLTSLVNTGALSNNETIVTNSRHFEALTHALASIHAVQEGIDLGISTDLFSIDIRECLRHLGNITGEYDVDKDILGHIFGNFCIGK
>NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein
MSINETFGEHIRNLREQSGLPLRKVAASLDIDPSTLSKIERGERSANKEMVPILAKMFSEDENTLGLILMSDKVANELLAEENPNEILKVAEEKIKYLKNKSLEQGSLDFDEQ
>NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase
MSIEQRREALTNLVNRYNQFKEEGRLDLTSEETIRTWLNEMLGIFGWDVQDTSQILQEKTLTQAERDRLREIGSTSIRPDYTFKLGKEKLTFLDAKDITVDLNTDTSASFQIKSYGWSILAPCAFISNFEQFAIYDCGYIPNREQAAEFGRIFLTVDEYIDNFELLDNHLFKPNIYGGRLAELYSGNEVEGIKKVSPDFAFANFLSGFRLTLAANILENNNEAIANDTSLLSYVVQVIINRILFIRVCEARRLEENGLLLQFKQEGFWERFKESSYLDFYQHYDGPLFDRIDSIHNLTINNEIFDELLSYLYYPSPYRFDVIPTKLLGDIYEIFLSKKLILTEEGVSDILKTEYIKSKGAVSTPQFLVDDILKRTLIKQNLIDSGVEGVLGISALDIACGSGVFLIGLYDYLEDIVLEIQSIAPNEAYSHLFSHTETELILNLRGKQAIIKNCIYGVDIDPEAVEVAKMSLALKAIDNEEYPEASEQIGLFGEQILNGIGLNVRCGNSLVDSSVLTQYPEILANDEELFKTRPFDWQTDDYFRDVFDNNGGFDFIVGNPPYVEVKHFNTELPFMHSFIKDTYTTGNNGKIDLAVPFVERGLSVLNDNGRLGFIVQKRFFKTDYGSKIRELISSGNHLSTIVDFTTQSIFKGKMTYVATLVLSKSPNEQFYYHKTEDSIETLPAYLRELSIAEIDETPFYNLPSESITANPWSFDDPSLLRIKLDLAELGTFGDVVNVKVGLQALKNEAYHINAIDISEGIITGRSNWQDEITIEEGACRPLMCNIQFYPFRPDTTDTYVIFPYDIIDGEKREIPYPEFCERFPLAGAYLDGQRARLEGPTANGGVQTMPIRNPQRYTVDYWHIYTRANNIEHVYPKVLVPMTTMDTFATVTLSEQIYCDNANMFFIQIDEVSEDRLFAVSGIINSIVFSVLGRSIANPQSNGYFKFNKQFLEPIPFPVENFNNSPELVNQLATVSRDIKNRQDQYRRNPNNRNTLIPVLRQLWNQLDNLVYSLYGLTEEQIAFFNERGRNVNRVTFLNNWM
>NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase
MKKIFENIVKKHSEDNAFLDQLFTSVYLYSRGIYDVKNKFIKDQLLEKDHELVLSVLPQIGSELSTQSLIELFEIAIPRDEQQTNGAVYTPDVIKDYIVDTTLTKFIDKLDTVLVADISCGCGAFLYSSAKKLKHKTQQPYRDIFSQLYGLDISSNSLQRAKILLSLLVIVEGEDEEGFSFNLFEGNALNFDWHKISSVKNNKGFDIVVGNPPYVRAKHIDSASKKLLKNWKVASSGNPDLYLPFFEIGMHWLNSNGVLGYITVNSFFKSVNARGLRNYLSNNEFPLTIINFGHEQIFEKRLTYTCICFIDKQNDGNVSYTKATSKDLLNKKSFNYSILNYNNLNHHRGWLLNNTKIVSNINRIENAGPSLDQLYSIKNGIATLSNDVYIFKPINEDDSNYYFIKDKKEYSVEKTICREIIKPNILKTENEIDEVKEKIIYPYTNGIAPLSLMKESKLQDEFPLAYNYLLDYKSQLDERDKGNGDYGAWFAFGRTQALNDKGLKLLFPYMAKKPHFVFTDNSDMLIYCGYAIFSESEEELLILKRILESDVFDYYMKNTSKPYSSGYYSYAKNYVKHFGVCELSDREKTELLSFNSKKRINQFVSDKYEILI
>NZ_LT634361.1|WP_100211295.1|1915477_1915984_+|hypothetical-protein
MQNHCFNILTFNHPQEELTLYFTNVENESLTRIFHKLVPDEVIEEFGEHEHYYTSFTTEVEGFYPVTKAVNPSYEIKEDENGEERSFRVHNSAISVSILKRYYNALIHEYFKRKGFLVKPNFVSDTEIWLPSKKYDKTGQFNLDYLINLGLISSNLFVKTHSYFDFHF
>NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase
MKVSKNAYYYWLKHKDVIKILPSKVLLKERIKFHFEQSREIYGSYRIQKMLEREGLVYARSYTGLLMKQLRLKSIIKRKYVATTNSYDNLSIAKNELDRNFTSLKLGEKWVSDTTNAVAESFFKTIKHE
>NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein
MELQANKTERIHSLDSLRAIMMLLGIVIHSAIPYTVTEFGFHKDPNTTHITVDIIFVLIHSFRMPIFMVIAGFFGAMLFYERGIYKMLKNRVTRVVFPFIVFLLLLHPTLQFAQLFAKAVFSGSNYPIKEAAAYFTNLLSFLPNVTWHLWFLYYLIYFVITSVIIATVFKKVPKKHTTGFLQISNNIFKKPFLRVFIFAGMTAFVFLIIGTPSIPHSNSFKPSLNVFIFYFSFYMVGWILYKSKEQLNSFKQLDWMCTILALVLFTIGLSIEQSKLIAAPYGNMIKILVQSLEVWLFIFGITGLFIRYASNHSARMRYISDASYWVYLVHYTLTIFIAPLLIGWEVHAITKFVIVIISTTIISFTSYHYLVRSTFIGKFLNGRKYSRKITDTKKEKERKPLHPALDK

Crispr_ID: NZ_LT634361_4

• CRISPR_ID: NZ_LT634361_4
• CRISPR_location: 1896896-1897051
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_LT634361_4

Consensus_repeat	Method
CTAAAAACATTAGATATCTCTAAAAATAC	CRISPRCasFinder

spacers of NZ_LT634361_4

>4.1|1896925|34|NZ_LT634361|CRISPRCasFinder
TGCTTTGGAGGTACTCAATTGCAGTAGCAATCAA
>4.2|1896988|34|NZ_LT634361|CRISPRCasFinder
CGCCTTGGAGGTGCTTTATTGCGGTAAAAACCAA

CRISPR arrays and Neighbor proteins around NZ_LT634361_4

CRISPR arrays

The CRISPR arrays of NZ_LT634361_4

>merge|NZ_LT634361|4|1896896-1897051|CRISPRCasFinder
CTAAAAACATTAGATATCTCTAAAAATACTGCTTTGGAGGTACTCAATTGCAGTAGCAATCAACTAAAAACATTAGATATCTCTAAAAATACCGCCTTGGAGGTGCTTTATTGCGGTAAAAACCAACTAACACGTTTAGACATATCTCACAATAAC

>NZ_LT634361|4|4|1896896-1897051|CRISPRCasFinder
CTAAAAACATTAGATATCTCTAAAAATAC	TGCTTTGGAGGTACTCAATTGCAGTAGCAATCAA
CTAAAAACATTAGATATCTCTAAAAATAC	CGCCTTGGAGGTGCTTTATTGCGGTAAAAACCAA
CTAACACGTTTAGACATATCTCACAATAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C	unknown	unknown	gnl|CDD|273954
NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase	unknown	unknown	gnl|CDD|319849
NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase	unknown	unknown	gnl|CDD|222853
NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223736
NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein	unknown	unknown	gnl|CDD|378240
NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|380294
NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin	unknown	unknown	gnl|CDD|381257
NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	unknown	unknown	gnl|CDD|226220
NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein	unknown	unknown	gnl|CDD|235167
NZ_LT634361.1|WP_159254639.1|1889841_1890156_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379262
NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein	unknown	unknown	gnl|CDD|225248
NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein	unknown	unknown	gnl|CDD|380191
NZ_LT634361.1|WP_157926231.1|1892840_1892996_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein	unknown	unknown	gnl|CDD|238119
NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase	unknown	unknown	gnl|CDD|274377
NZ_LT634361.1|WP_100211295.1|1915477_1915984_+|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase	unknown	unknown	gnl|CDD|224523
NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl|CDD|235392

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C	gnl|CDD|273954	TIGR02073, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1C. This subfamily of the penicillin binding proteins includes the member from E. coli designated penicillin-binding protein 1C. Members have both transglycosylase and transpeptidase domains and are involved in forming cross-links in the late stages of peptidoglycan biosynthesis. All members of this subfamily are presumed to have the same basic function. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase	gnl|CDD|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.63086e-13
NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator	gnl|CDD|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.27474e-30
NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin	gnl|CDD|381257	cd08916, TrHb3_P, Truncated hemoglobins (TrHbs, 2/2Hb, 2/2 globins); group 3 (P). The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. They are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). TrHb3s include Campylobacter jejuni Ctb, encoded by Cj0465c, which may play a role in moderating O2 flux within C. jejuni.	5.52809e-48
NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase	gnl|CDD|380294	NF033452, BREX_1_MTaseX, BREX-1 system adenine-specific DNA-methyltransferase PglX. This protein, PglX, is a site-specific DNA methyltransferase associated BREX (bacteriophage exclusion) type 1 systems. The phage resistance appears not to be through restriction-modification, as phage DNA appears not to get degraded, but it does manage to inhibit phage replication.	9.63696e-15
NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein	gnl|CDD|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	1.25652e-32
NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter	gnl|CDD|226220	COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism].	0
NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	5.15999e-34
NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein	gnl|CDD|235167	PRK03854, opgC, glucans biosynthesis protein MdoC.	6.30732e-37
NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	5.81308e-08
NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein	gnl|CDD|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	1.78732e-157
NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase	gnl|CDD|274377	TIGR02987, m6_adenine_and_m5_cytosine_DNA_methyltransferase, type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family. Members of this family are the m6-adenine DNA methyltransferase protein, or domain of a fusion protein that also carries m5 cytosine methyltransferase activity, of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A methyltransferase of this family is alway accompanied by a type II restriction endonuclease from the Alw26I/Eco31I/Esp3I family (TIGR02986) and by an adenine-specific modification methyltransferase. Members of this family are unusual in that regions of similarity to homologs outside this family are circularly permuted. [DNA metabolism, Restriction/modification].	2.44397e-07
NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein	gnl|CDD|380191	NF033187, internalin_J, class 1 internalin InlJ. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin J (InlJ).	2.38177e-18
NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein	gnl|CDD|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	0.000940512
NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase	gnl|CDD|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	5.81296e-31
NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl|CDD|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0

Protein sequences

>NZ_LT634361.1|WP_100211286.1|1894399_1896403_+|T9SS-type-A-sorting-domain-containing-protein
MKKHVLILLCFLPFLNGFARTNCNEEQKITSFRNASFKTFSALHKSVNINNNSQIQNPKTNELLINNKQTEITASSFKKAQQYNLTIDTNNGGSITMKVNGAVLAPYPYPTNAVFDENTEVTLNASPSNGYEFVEWIGDVTGNTSSLKITMDSDKKVTAVFKKAQQHTLTADVSNGGSLIIKVGNVVTNPYPYPTKVVFDHNTEITLNANPNNGYEFVEWTGDVTGNTNPLKITLDSDKNITAVFKKTANVLTLNASNGVIAVTANNLTQTPTKYPISGNFPPNTMVSLNAKPSNGYKFVKWTGDITVNTPIATIKMDGDKNVTAVFEKDATPVVYIPDANFKEILIGKQLINTNNDNEIQVAEAEAYSGVIYVSGEGKSESKKIKDLTGIEAFKNLVELDCSYNRISYLVLSNNPKLKIVNANNNQIFYTGLFSCTELKELKIETNLVPNLDLSENTKLEVLQCSNNSLQELSAPNSPILNILTCSNNQLTTLDTSNNPNLSSLKCNGNLLTKLDISNNTNLETLNCANNNLSNLNINIGHLLNNFDATNNPNLTCIEVDDINAIPAPWYKDAIAQYSTNCNATAGVDDIFTSKLSIYPNPVNNLLRITKNQHQDIKNVHIFNMVGQKILQTDELTINCSELSKGVYILKVESTDHKTGIKKFIKN
>NZ_LT634361.1|WP_100211285.1|1893644_1894241_+|Crp/Fnr-family-transcriptional-regulator
MIHNELLLKYGAKTQEYTKNKIIFSENEYAKNYYQIISGAVKMSNFNDDGKEFIQGIFYKQQSFGEPPLFINVTYPANAITLVKTTLFILPKKALLQLLYAQPEIHLNITKSLANKLYYKAIIASEISNQEPTHRIIRFFDYLKNDVHHINGSFNFKVPYTRQQIADILGLRVETVIRTIKNLEQKKALKIINRKVFW
>NZ_LT634361.1|WP_024741784.1|1893172_1893577_-|group-III-truncated-hemoglobin
MELKEIENREDIYILVSTFYDKIKKDEFIGPIFLKMISANEWSHHLEKLTDFWETNLFFVRKFKGNPVKVHQHIDIVYNYSITQKHFGKWLELWCSTVDELFEGRKAIEAKERARNIAFMLFMKMFKEKPKETN
>NZ_LT634361.1|WP_157926231.1|1892840_1892996_+|hypothetical-protein
MNTQLIASNEITSRNNTLSKLIYWMGGFIYKGEGNSMEISIRLIMLDMVIT
>NZ_LT634361.1|WP_100212021.1|1890640_1892509_-|VWA-domain-containing-protein
MNPKITTKTTKNKKPVLAVAIDNSLSIKHFKETEKAKKIVEEFKKSKALNSKFEVNYFAFDEDIKTLDSLSFDKNQTNISQAIQSINNLYENDLGAIIMLTDGNQTIGNDYEFIASKQSIYPIALGDTTAYNDIKIARLNVNKYSYIKNKFPVEVMLYYEGKEKVTTKFSIYRNEKNIYSEKIYFTPQNNTKTIRVNLISLKEGIGYYKAVVGEISKEKNTKNNYKNFSVEVIDEQLKIGIVSSINHPDLGALKKAIEVNKQRKVEILDLSKKNNYKNDYQLLILYQPNNKFKNLFEWLNAEKLNYMIVSGAQTDWGFLNKQQSFFTKNTIQKLERYGGGYNDRFLTFQQKNIGFNGLPPLQDKFGEITAKGVFQPLLFQKISGILTKQPLLATFEENNQKITALFGEGIWRWRASLFRKENTFEEFDAFIGNIVQYLSTNKKRARLEVEGENLYPANSVVNISAFYLDKNYQFDNRASLQLTLTNKATKSIKRLPMSLVGNSYQVSIESLAPGNYSYQVSVANQQLKVYGRFKITDYEVEEQFVNGNNKKLKALGERTKGKLFYPSQVVGLKEKLIADRSFYTTQKEIKTTQNLIDWEWILLFIATLLATEWFIRKYYGKI
>NZ_LT634361.1|WP_024741782.1|1890226_1890616_-|acyl-CoA-thioesterase
MKFHTRKWVKPEDLNPNGTLFGGRLLQWIDEELGIYAIIQLEIPRTVTKFMSEIDFVSSAKQGDIIEIGIEVVAFGKSSITLRCEVRNKLTHKTIIEIDKIVMVSLGADGKPIGHGKTKVEYVKDRLKK
>NZ_LT634361.1|WP_159254639.1|1889841_1890156_-|hypothetical-protein
MTLLLLVPPVQAHADTIVFENTSEVHFNSLEKGHHQKHHQHDTEEERNTDHHHHCTIVGVSSAIITPNFSFQFVRFSQARKRIHFYKELNASSFLDELFQPPQI
>NZ_LT634361.1|WP_100211283.1|1885347_1889661_-|CusA/CzcA-family-heavy-metal-efflux-RND-transporter
MLDSIIKFSIKNKLIIGALIVMLIGMGVYSLKQLPIDAVPDITNNQVQIITSAPSQSAQDIERLVTFPIEMTMSSIPKIEEVRSFSRFGLSVVTIVFEDNVDIYWARQQINERLGEAKSNIPEGIGSPEMAPVTTGLGEIYQYTLFPKEGFEKKFSAMELRSIQDWIVRRQLLGLEGVADVSSFGGLLKQYEVAVQPERLQTLEVSINEVLEALSKNNQNTGGAYIDKNPKAYFIRSQGLVKTPEDIENVVVKNAANGTPILIKDIAKVQLGSAIRYGAMTRDGKGEVVGGIVMMLKGANSSKVIKRVKDRVAQIQASLPEGVEIKPFLDRTKLVNKAIKTVATNLVEGALIVIFILVLLLGNLRAGLIVASVIPLSMLFAVILMNLFGVSGNLMSLGAIDFGIIVDGSVIIVEATLHYLGLKKSGVKLSQEEMDEEVYNSASKIRTSAAFGEIIILIVYLPILALVGIEGKMFKPMAITVSFAILGAFLLSLTYVPMISALFLKKTITNKVTISDRIIMAIQKKYTPLLEFVLNYKKGVIIGVVLIFALSIFTFKNMGSEFIPSLDEGDLAVQANVSTGSSLSYTIDVTNKSSQLLKKEFPDEIEQIVSRIGSSEIPTDPMPVEIADIIIILKDKSQWKKATTKNELTEKMNALLSQNMLGVSYGFQQPIQMRFNELMTGARQDVVLKIYGEDLDKLVKYANELGGIIPTVKGAEDLYIEKMTGLKQIVIDYNRSQLAFYGLNISDINRAINTAFAGQSAGAVYEGEKRYDLVVRMPKERRGNIEDVRKLYITTPNGTKIPLESVAKVTFKAGPNQIQRDDAKRRITIGFNVRGRDVASIVNELKLKVSKKMKFDPGYYITYGGTFKNLEEARARLGIAVPVALLLIFLLLYFTFNSIKQSILIYTAIPMSAIGGIFALWLRDMPFSISAGIGFIALFGVAVLNGIVLIAEFNRLKAQGITEVKEIIRKGTAVRLRPVIMTAAVASLGFLPMAISSSAGAEVQKPLATVVIGGLVSATLLTLLILPVLYMIFEEGKGIKIRFKKLTTVVALLGVFFAQAQEQPKTLSEEQVVSLSLEKSVKLNSSKLNITKNKMEIPKSVDLEPASVRYQDIGTMSGVSEKEWGLSQNFGGILTHIQKRKLALAKYDLSKLSNKISEKEVIRNAKSLYQEWHYLYGLVKLMEEQQKNTNLIKGIAKKLYDAGEIGGLENDLTNLQSLGVQSQKNKIYKDFIRVENALKEMLQSKEAIVPLTKYPAKKKPLIQQDSLSELFEAILGKQDMVAKKKISVARSVYFPELTAGVLKRRLSEMKDTYRGFTVGVNIPLSFWSNKAKIKQQKIAREELAYVNKSKKIAIQNNFKSLKEQLQYLEEELVSIENTVIKVNKFIKKLQLAYTSGEVDAYKYNQSFNTYFQVMQNYLSLIYNYNQTVIAYEFYIKE
>NZ_LT634361.1|WP_024741779.1|1884148_1885345_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKIIILAVTAIFIISCNLKGGDHSDHDHAAEEGVPNSKKESKEEHNENELHLTKEQLIAAGIQSEEITKREIRNRVAVTGTIEVPPQSKATIYAPLEAFVHKTNLLPGDKVTKGQIIAVLQHPNFIELQYAYLEAINKRNVAQADYKRKKMLLENEIASKKSYQIVEGAYRSAQSLVDSYKEQLKLAGLSPDKIVTKGIQQYVEVKAPISGYVVENNLNKGMFLAANSEMMEIIDNDHMHAELNVFGTDITKIKKGDEFIFKPSGVDVEYKGAIQLISQKVNEKTKTVNVHGHFEDEENRLKSGMFINAEILLKGREVFTVPENALIEKGDEYFVFMAESKTEFIPLEVTIGNSDKGFVEVKAIQGDNFNIRVVTKGAHFLKGKLLQQSGGMEGHAH
>NZ_LT634361.1|WP_100211282.1|1882071_1884051_-|heavy-metal-translocating-P-type-ATPase
MSEKHLKAKEHDHSHGGIFGESTELYFAILSGFFFFLGVVLEKLTDVQEIYTLGSFVIAFFFGGWFTTKEAIEKIRKGEFEIDFLMLIAALGAAYINKWEEGALLLFLFSLGHSLENYAMGKAKKSIEALGELSPKKVLVKRGETTAEILIEELKLEDIIVVKPNTKIGADGVIIKGHTSINQASITGESMPVDKEAIQEEVGNLKFEEIDKRNVVYTGSINGDNLIEVLVLKLNEDSTISRLIKMVNEVETKKSPTQLFTKKFEKWFVPIVIVLVFLLCFAYLVIDESFEQSIYRAITVLVAASPCALAISTPSAVLSGVARGAKGGVLIKGGRALEDLGSLTTIAFDKTGTLTEGTPRLTNIITVNNTDKETLLELVLSVESLSNHPLAKAISKEIITKYATVNRGEVSNIEAFQGMGIRAIYREKEAFIGNLHLMETKAISISEEVREMMKGFLEGGNTTMLVAYNKKLIGILTVMDTPRKFAKETLQSLKKLGIKKMVMLTGDHQNVGEAIANEIGLSEVRGGLLPEEKVSAIQQLQKKNTKIAMVGDGVNDAPAMASSSVGIAMGAAGSDVALETADIALMSDKIEKLPFVIGLSRTSKIIIKQNLWMSLGVVALLIPATLFGVASIGPVVIIHEGSTLLVVLNALRLLRFKED
>NZ_LT634361.1|WP_100211288.1|1899446_1899785_-|DUF4870-domain-containing-protein
MKKNNQLLVLTHLSQLLDFVTGIGGFVVPLILWVSTKDEILHMDEHGKAILNFRITMFIYFLICIPLILFFGLGIVGFLVLWVFYMIFPIINAIKASNDQMPNYPFTITFIS
>NZ_LT634361.1|WP_100211289.1|1899897_1902288_-|penicillin-binding-protein-1C
MKKDYFFKGIYCCINNGLTYFRKHPIKIIIVSISIIAYYYCLPRKLFEVPTSTVVTAKNHELLGAVIAKDGQWRFPEVASVPKKFEICILKFEDAHFYWHFGFNPISIGKALVENIKAKRVVRGGSTISQQVIRLARNHKKRSYAEKIKELLLATRLEFRYSKEEILKLYASHAPFGGNVVGLEMASWRYFGLQPDQLSWAESATLAVLPNAPSLIYPGKNQERLKRKRNRLLRKLYEAAAIDSITYMLAIEESLPQKPFDLPTIAPHLVQEIAKKHEGKYVQSSIDIHTQKQVNSLVQQHYFRQKQNEVYNMAVLVLEVATRKIVSYVGNSPTDKAHQKDVNNVIAPRSTGSTLKPFLYAEMLQSGDLLPTQLIADIPTEIAGYSPNNFDLTFDGAVHANEALTRSLNIPAVRMLQTYGLEKFREHLRRYKIQDIDKSADYYGLPLILGGAEASLWDLCKTFAAYAGIVNHYKSLQYHYYEKEFVTPSYKHTDTVNFGAIKKENNDIDAGTAFTVLEVLTEVNRPYTDQAWKYFDTSQKVAWKTGTSFGNKDAWAIGTTPKYVVGVWVGNSDGEGRSDLTGVGSAAPLMFDVFDVLPKSTWFATPYEDLVAARICKQSGYLALPICEWELRNIPKNGVKGKSCPYHRQITVDSTVQYQVHSNCESVSKIKVLPWFVLPPLIAHYYQQKNTDYRELPSYRNDCVGIAGRNTMDFVFPTKNSSKIFLTKNEASQINPVVLKLMHTDAEAKVYWYLNDEFIGVTQHYHEQAIQPEKGNYKITVIDDFGNEKTRFINIE
>NZ_LT634361.1|WP_100211290.1|1902483_1907985_-|hypothetical-protein
MKKTMKLLSILLLVFISNACKKTTATESNIHAYSEYITMYPEKMISVVPKLDFFLKKELREATIAEDVISISPKVEGEVLFRDQVLSFIPKEKLKSNALYTITLHLSKLYEDISPDLKDFTIKVKTKELLFNVALESPTVLTKDWYAVTGVLTASDVIDTAKLGTIITANYEGKPKKIIFETFEPLASKVHFKIDSLQRFEENKDLKVSWSGVEIASASEGTRELTIAGKNNFKILDIEVVNDDKQYIEISFSDPIKKAQHIKGLIQLTNTQKRKFTYGIKKNIVTLYPRASFKNNVTIEVFKGIQSIGGYTLKNNYSKTLYFEQLKPSVSFINSGSILPNSSNVKLNFKAVNLKAVDATVYKIYKNNILQFLQTNNVNNQGSLNYVGRPVAKYTVNLSNQGLDLDKENVFAIDLSEITTIEPGAMYRVALSFNEAYSNYVCDQKAPKTTIIYGKKEIATENYDRISYDDEYYDTYDWNERDDPCTASYYYDKKISTNILATDLGVIVKKGSNATTFVAVTNLLTTAPEEGAKVTLYNLQQQPIKTSQTNKEGVAIFEGISNAFFAAITKENSTTYVKLNDGNSLSMSKFDVSGVKLQKGIKGYLYGERGVWRPGNQLFLTFVLNDKANPIPEKHPIKFELLNPQGKLIHRKLLYKNKANVYAYAPKTNENALTGNWKLRVSVGGAVFQKTLKIETIKPNRLKIQFSMTEEEEFIKANSSMKGKVVVKWLHGAIAKDLKIDINGKFRQTKTVFSTFKNYNFDDVAKRFGTEEFRVGEGTLNEEGLATFSVKPKLNRGAPGMLKASFITKVYENGGDFSTDVFSKKVSPYTSYAGLLNAEEQQSKNYLFTDENYTFNVVSVNEKGVGIPNTLRVQIYKLSWRWWWNTTNDGLSNYDGTNYHEPYKTVTVTTDANGKGAFDLKVDKNDWGRYLIKVLDRKSKHVTSNVAYFDWPSWYGKKRGSQDKTNATMLVCTTDKESYKIHETATIKFPSSEGGRALITIENGTQVLDHFWVTTTAQQTTFNFPVLPTYTPNVFVNISLLQAHHQTENDLPMRMYGTIPMEVIDETTKLTPEIKMAEELQPETIATLEVKEKEGKPMTYTIAVVDEGLLDLTRFKTPNPWNTFYAKQSLGVKTWDIFDDVIGAYGGKVNQILSIGGDESEAGSKNKKANRFKPMVRYLGPFTLKEGATKKHHIQIPKYIGAVKAMVVAANTDKEAYGSSEKTAFVRKPVMILASLPRKITPQETVTLPVTVFAMKPSVKRVAVTVQPDASYTIISNASQELSFNEPGEKMAYFKLKVNDFKGIGKVKVIARSGSEKASYEVAIDVLNPNPITTEVKDMVLKSNAENELYFTNFGTKGTNAISVELSTLPPMNFTKRMEYLIQYPHGCVEQTTSSAFPQVYLPEIFELSEEKQQAIERNIKATIQRLSDFQLSNGGLSYWQGGSSADSWGTSYAGHFMIEAAKKGYALPIGFKTAWIGYQKERARSWRNNNSYDNNALSQAYRLYTLSLANSADLASMNRLRSTNGISNEAKMRLANAYAIIGKEPIAKAILRTLTTKNYAKRRYSNYGSEMRNRAMALETYTLLQNETKAIKLAKIIAESLSSEAWMSTQTTAFSLLAMSKYALKNGGAEGINASYSLNGTSKKVRISKALYTQDLKGSQKENTFKAINHGTGVLYVRVFHKGILPVGSEKVMQNNLETSIVYKTKEGASMLPTRIAQGTNFIAEITVKNTTNKHIKNVALTTLIPSGWEIINTRFTDFGNHTSTSKVDYTDIRDASIRNYFSVRSHQTKRFQVLLNASYLGRYYLPGIQVEAMYDNDYVARTKGQWIEVIN
>NZ_LT634361.1|WP_100211291.1|1908296_1909691_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MIQNDTIIALATPAGVGAIAVIRLSGEKSIEIVNSFFKSVKKEKSLLLQKTHTLHLGHIVNNGVVLDQVLVSIFKNPHSYTGENVVEISCHGSSFIQQEIIQLFLKNGCRMADNGEFTMRAFLNGKMDLSQAEAVADVIASNSAASHQMAIQQMRGGITNELKVLRTQLLDFAALIELELDFSGEDVEFADRSKFKELVAKITLVLKRLIDSFAFGNAMKNGIPVAIIGEPNVGKSTLLNTLLDEEKAIVSDIAGTTRDAIEDELVIHGVAFRFIDTAGIRETKDFVENIGIKKAYEKAENAQLILFLIDAHKFIDSSEEFLQEIKVIKKRFPNKRLLVIANKIDTLSCHDTAILQSEIDHLILLSAKQKTGIEALKSHLTSLVNTGALSNNETIVTNSRHFEALTHALASIHAVQEGIDLGISTDLFSIDIRECLRHLGNITGEYDVDKDILGHIFGNFCIGK
>NZ_LT634361.1|WP_100211292.1|1910148_1910490_+|helix-turn-helix-domain-containing-protein
MSINETFGEHIRNLREQSGLPLRKVAASLDIDPSTLSKIERGERSANKEMVPILAKMFSEDENTLGLILMSDKVANELLAEENPNEILKVAEEKIKYLKNKSLEQGSLDFDEQ
>NZ_LT634361.1|WP_100211293.1|1910486_1913612_+|N-6-DNA-methylase
MSIEQRREALTNLVNRYNQFKEEGRLDLTSEETIRTWLNEMLGIFGWDVQDTSQILQEKTLTQAERDRLREIGSTSIRPDYTFKLGKEKLTFLDAKDITVDLNTDTSASFQIKSYGWSILAPCAFISNFEQFAIYDCGYIPNREQAAEFGRIFLTVDEYIDNFELLDNHLFKPNIYGGRLAELYSGNEVEGIKKVSPDFAFANFLSGFRLTLAANILENNNEAIANDTSLLSYVVQVIINRILFIRVCEARRLEENGLLLQFKQEGFWERFKESSYLDFYQHYDGPLFDRIDSIHNLTINNEIFDELLSYLYYPSPYRFDVIPTKLLGDIYEIFLSKKLILTEEGVSDILKTEYIKSKGAVSTPQFLVDDILKRTLIKQNLIDSGVEGVLGISALDIACGSGVFLIGLYDYLEDIVLEIQSIAPNEAYSHLFSHTETELILNLRGKQAIIKNCIYGVDIDPEAVEVAKMSLALKAIDNEEYPEASEQIGLFGEQILNGIGLNVRCGNSLVDSSVLTQYPEILANDEELFKTRPFDWQTDDYFRDVFDNNGGFDFIVGNPPYVEVKHFNTELPFMHSFIKDTYTTGNNGKIDLAVPFVERGLSVLNDNGRLGFIVQKRFFKTDYGSKIRELISSGNHLSTIVDFTTQSIFKGKMTYVATLVLSKSPNEQFYYHKTEDSIETLPAYLRELSIAEIDETPFYNLPSESITANPWSFDDPSLLRIKLDLAELGTFGDVVNVKVGLQALKNEAYHINAIDISEGIITGRSNWQDEITIEEGACRPLMCNIQFYPFRPDTTDTYVIFPYDIIDGEKREIPYPEFCERFPLAGAYLDGQRARLEGPTANGGVQTMPIRNPQRYTVDYWHIYTRANNIEHVYPKVLVPMTTMDTFATVTLSEQIYCDNANMFFIQIDEVSEDRLFAVSGIINSIVFSVLGRSIANPQSNGYFKFNKQFLEPIPFPVENFNNSPELVNQLATVSRDIKNRQDQYRRNPNNRNTLIPVLRQLWNQLDNLVYSLYGLTEEQIAFFNERGRNVNRVTFLNNWM
>NZ_LT634361.1|WP_100211294.1|1913613_1915452_+|N-6-DNA-methylase
MKKIFENIVKKHSEDNAFLDQLFTSVYLYSRGIYDVKNKFIKDQLLEKDHELVLSVLPQIGSELSTQSLIELFEIAIPRDEQQTNGAVYTPDVIKDYIVDTTLTKFIDKLDTVLVADISCGCGAFLYSSAKKLKHKTQQPYRDIFSQLYGLDISSNSLQRAKILLSLLVIVEGEDEEGFSFNLFEGNALNFDWHKISSVKNNKGFDIVVGNPPYVRAKHIDSASKKLLKNWKVASSGNPDLYLPFFEIGMHWLNSNGVLGYITVNSFFKSVNARGLRNYLSNNEFPLTIINFGHEQIFEKRLTYTCICFIDKQNDGNVSYTKATSKDLLNKKSFNYSILNYNNLNHHRGWLLNNTKIVSNINRIENAGPSLDQLYSIKNGIATLSNDVYIFKPINEDDSNYYFIKDKKEYSVEKTICREIIKPNILKTENEIDEVKEKIIYPYTNGIAPLSLMKESKLQDEFPLAYNYLLDYKSQLDERDKGNGDYGAWFAFGRTQALNDKGLKLLFPYMAKKPHFVFTDNSDMLIYCGYAIFSESEEELLILKRILESDVFDYYMKNTSKPYSSGYYSYAKNYVKHFGVCELSDREKTELLSFNSKKRINQFVSDKYEILI
>NZ_LT634361.1|WP_100211295.1|1915477_1915984_+|hypothetical-protein
MQNHCFNILTFNHPQEELTLYFTNVENESLTRIFHKLVPDEVIEEFGEHEHYYTSFTTEVEGFYPVTKAVNPSYEIKEDENGEERSFRVHNSAISVSILKRYYNALIHEYFKRKGFLVKPNFVSDTEIWLPSKKYDKTGQFNLDYLINLGLISSNLFVKTHSYFDFHF
>NZ_LT634361.1|WP_157926232.1|1916096_1916486_-|IS3-family-transposase
MKVSKNAYYYWLKHKDVIKILPSKVLLKERIKFHFEQSREIYGSYRIQKMLEREGLVYARSYTGLLMKQLRLKSIIKRKYVATTNSYDNLSIAKNELDRNFTSLKLGEKWVSDTTNAVAESFFKTIKHE
>NZ_LT634361.1|WP_100211297.1|1917829_1919053_-|acyltransferase-family-protein
MELQANKTERIHSLDSLRAIMMLLGIVIHSAIPYTVTEFGFHKDPNTTHITVDIIFVLIHSFRMPIFMVIAGFFGAMLFYERGIYKMLKNRVTRVVFPFIVFLLLLHPTLQFAQLFAKAVFSGSNYPIKEAAAYFTNLLSFLPNVTWHLWFLYYLIYFVITSVIIATVFKKVPKKHTTGFLQISNNIFKKPFLRVFIFAGMTAFVFLIIGTPSIPHSNSFKPSLNVFIFYFSFYMVGWILYKSKEQLNSFKQLDWMCTILALVLFTIGLSIEQSKLIAAPYGNMIKILVQSLEVWLFIFGITGLFIRYASNHSARMRYISDASYWVYLVHYTLTIFIAPLLIGWEVHAITKFVIVIISTTIISFTSYHYLVRSTFIGKFLNGRKYSRKITDTKKEKERKPLHPALDK

Crispr_ID: NZ_LT634361_6

• CRISPR_ID: NZ_LT634361_6
• CRISPR_location: 2135962-2137577
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 24 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_LT634361_6

Consensus_repeat	Method
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CRISPRCasFinder
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CRT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	PILER-CR

spacers of NZ_LT634361_6

>6.1|2135998|30|NZ_LT634361|CRISPRCasFinder,CRT
AAGGTGTTCAATACTGTTACTTTAACTTCT
>6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
AATCGCTGGAACATATTTTTGCGCACTACC
>6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TAACAAGGTTTATAATGCTTTTGGTAAACG
>6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
CAAAAAATTGTAATTTCAAGAAGTTTAAT
>6.5|2136261|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TCATTAAATCTCTTCCCTTCTTATAATTCT
>6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
AAAGTATTCAATACTGTTACTTTAACTTCT
>6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TTAAAAAGATTAATATTTTCAATCCTCCC
>6.8|2136458|31|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
CTGGTTAGGTACACAAAGCTATATTCAAATA
>6.9|2136525|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TACGTCCGTTTAAGACAATCATTTTTTTCT
>6.10|2136591|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
AAAAAACCACTTAAAAAGTAAGTATATCA
>6.11|2136656|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TGTACTTAGGCGTTCTTTAATTAAATTTA
>6.12|2136721|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
AAGAGTTAAAAACCAAAGAGTACGAATATG
>6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TACGGGTAATACCATAATCCATTAATTCTT
>6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TAAATCATGTTTAAACAATAAAATATGAAA
>6.15|2136919|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
GTGTCTCCCCAAATATAATTATCCTCGTGG
>6.16|2136985|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
GCTTATACGGAAACGCTCAATTCAGAAATT
>6.17|2137051|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TATGTAATGTAGTAAGCTCCTCCGCTATCT
>6.18|2137117|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TATAACGGACGAATTGCATGACTTTACCCT
>6.19|2137183|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
CTCGTGGTTGGTTTTATACATTACACGCAA
>6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
TAATTCACTTAATTTTACGTTTTTTAATTT
>6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
CAAACCATCTAAATCAACGTGAAAGGTATC
>6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
AAAGGTGTTTCAAGTATGAAAGATTTTTCC
>6.23|2137447|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR
ACACTAAGCTTAGTTTCTATTAATAACAAA
>6.24|2137513|29|NZ_LT634361|CRISPRCasFinder,CRT
TGTTCAGAAAGGATATTTAGATGTAAGTT

CRISPR arrays and Neighbor proteins around NZ_LT634361_6

CRISPR arrays

The CRISPR arrays of NZ_LT634361_6

>merge|NZ_LT634361|6|2135962-2137577|CRISPRCasFinder,CRT,PILER-CR
AATATCGTTATCTCTAATCTTTTATCAAACCACAACAAGGTGTTCAATACTGTTACTTTAACTTCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACAATCGCTGGAACATATTTTTGCGCACTACCAATATCGTTATCTCTAATCTTTTATCAAACCACAACTAACAAGGTTTATAATGCTTTTGGTAAACGAATATCGTTATCTCTAATCTTTTATCAAACCACAACCAAAAAATTGTAATTTCAAGAAGTTTAATAATATCGTTATCTCTAATCTTTTATCAAACCACAACTCATTAAATCTCTTCCCTTCTTATAATTCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACAAAGTATTCAATACTGTTACTTTAACTTCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACTTAAAAAGATTAATATTTTCAATCCTCCCAATATCGTTATCTCTAATCTTTTATCAAACCACAACCTGGTTAGGTACACAAAGCTATATTCAAATAAATATCGTTATCTCTAATCTTTTATCAAACCACAACTACGTCCGTTTAAGACAATCATTTTTTTCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACAAAAAACCACTTAAAAAGTAAGTATATCAAATATCGTTATCTCTAATCTTTTATCAAACCACAACTGTACTTAGGCGTTCTTTAATTAAATTTAAATATCGTTATCTCTAATCTTTTATCAAACCACAACAAGAGTTAAAAACCAAAGAGTACGAATATGAATATCGTTATCTCTAATCTTTTATCAAACCACAACTACGGGTAATACCATAATCCATTAATTCTTAATATCGTTATCTCTAATCTTTTATCAAACCACAACTAAATCATGTTTAAACAATAAAATATGAAAAATATCGTTATCTCTAATCTTTTATCAAACCACAACGTGTCTCCCCAAATATAATTATCCTCGTGGAATATCGTTATCTCTAATCTTTTATCAAACCACAACGCTTATACGGAAACGCTCAATTCAGAAATTAATATCGTTATCTCTAATCTTTTATCAAACCACAACTATGTAATGTAGTAAGCTCCTCCGCTATCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACTATAACGGACGAATTGCATGACTTTACCCTAATATCGTTATCTCTAATCTTTTATCAAACCACAACCTCGTGGTTGGTTTTATACATTACACGCAAAATATCGTTATCTCTAATCTTTTATCAAACCACAACTAATTCACTTAATTTTACGTTTTTTAATTTAATATCGCTATCTCTAATCTTTTATCAAACCACAACCAAACCATCTAAATCAACGTGAAAGGTATCAATATCGCTATCTCTAATCTTTTATCAAACCACAACAAAGGTGTTTCAAGTATGAAAGATTTTTCCAATATCGTTATCTCTAATCTTTTATCAAACCACAACACACTAAGCTTAGTTTCTATTAATAACAAAAATATCGTTATCTCTAATCTTTTATCAAACCACAACTGTTCAGAAAGGATATTTAGATGTAAGTTAATATCGTTATCTCTAATCTTTTATAGTTCAAAAGA

>NZ_LT634361|6|6|2135962-2137577|CRISPRCasFinder
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAGGTGTTCAATACTGTTACTTTAACTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AATCGCTGGAACATATTTTTGCGCACTACC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAACAAGGTTTATAATGCTTTTGGTAAACG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CAAAAAATTGTAATTTCAAGAAGTTTAAT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TCATTAAATCTCTTCCCTTCTTATAATTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAGTATTCAATACTGTTACTTTAACTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TTAAAAAGATTAATATTTTCAATCCTCCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTGGTTAGGTACACAAAGCTATATTCAAATA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGTCCGTTTAAGACAATCATTTTTTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAAAACCACTTAAAAAGTAAGTATATCA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TGTACTTAGGCGTTCTTTAATTAAATTTA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAGAGTTAAAAACCAAAGAGTACGAATATG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGGGTAATACCATAATCCATTAATTCTT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAAATCATGTTTAAACAATAAAATATGAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GTGTCTCCCCAAATATAATTATCCTCGTGG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GCTTATACGGAAACGCTCAATTCAGAAATT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATGTAATGTAGTAAGCTCCTCCGCTATCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATAACGGACGAATTGCATGACTTTACCCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTCGTGGTTGGTTTTATACATTACACGCAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAATTCACTTAATTTTACGTTTTTTAATTT
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	CAAACCATCTAAATCAACGTGAAAGGTATC
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	AAAGGTGTTTCAAGTATGAAAGATTTTTCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	ACACTAAGCTTAGTTTCTATTAATAACAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TGTTCAGAAAGGATATTTAGATGTAAGTT
AATATCGTTATCTCTAATCTTTTATAGTTCAAAAGA

>NZ_LT634361|6|1|2135962-2137577|CRT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAGGTGTTCAATACTGTTACTTTAACTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AATCGCTGGAACATATTTTTGCGCACTACC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAACAAGGTTTATAATGCTTTTGGTAAACG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CAAAAAATTGTAATTTCAAGAAGTTTAAT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TCATTAAATCTCTTCCCTTCTTATAATTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAGTATTCAATACTGTTACTTTAACTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TTAAAAAGATTAATATTTTCAATCCTCCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTGGTTAGGTACACAAAGCTATATTCAAATA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGTCCGTTTAAGACAATCATTTTTTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAAAACCACTTAAAAAGTAAGTATATCA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TGTACTTAGGCGTTCTTTAATTAAATTTA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAGAGTTAAAAACCAAAGAGTACGAATATG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGGGTAATACCATAATCCATTAATTCTT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAAATCATGTTTAAACAATAAAATATGAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GTGTCTCCCCAAATATAATTATCCTCGTGG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GCTTATACGGAAACGCTCAATTCAGAAATT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATGTAATGTAGTAAGCTCCTCCGCTATCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATAACGGACGAATTGCATGACTTTACCCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTCGTGGTTGGTTTTATACATTACACGCAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAATTCACTTAATTTTACGTTTTTTAATTT
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	CAAACCATCTAAATCAACGTGAAAGGTATC
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	AAAGGTGTTTCAAGTATGAAAGATTTTTCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	ACACTAAGCTTAGTTTCTATTAATAACAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TGTTCAGAAAGGATATTTAGATGTAAGTT
AATATCGTTATCTCTAATCTTTTATAGTTCAAAAGA

>NZ_LT634361|6|1|2136028-2137512|PILER-CR
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AATCGCTGGAACATATTTTTGCGCACTACC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAACAAGGTTTATAATGCTTTTGGTAAACG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CAAAAAATTGTAATTTCAAGAAGTTTAAT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TCATTAAATCTCTTCCCTTCTTATAATTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAGTATTCAATACTGTTACTTTAACTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TTAAAAAGATTAATATTTTCAATCCTCCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTGGTTAGGTACACAAAGCTATATTCAAATA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGTCCGTTTAAGACAATCATTTTTTTCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAAAAACCACTTAAAAAGTAAGTATATCA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TGTACTTAGGCGTTCTTTAATTAAATTTA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	AAGAGTTAAAAACCAAAGAGTACGAATATG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TACGGGTAATACCATAATCCATTAATTCTT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAAATCATGTTTAAACAATAAAATATGAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GTGTCTCCCCAAATATAATTATCCTCGTGG
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	GCTTATACGGAAACGCTCAATTCAGAAATT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATGTAATGTAGTAAGCTCCTCCGCTATCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TATAACGGACGAATTGCATGACTTTACCCT
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	CTCGTGGTTGGTTTTATACATTACACGCAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	TAATTCACTTAATTTTACGTTTTTTAATTT
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	CAAACCATCTAAATCAACGTGAAAGGTATC
AATATCGCTATCTCTAATCTTTTATCAAACCACAAC	AAAGGTGTTTCAAGTATGAAAGATTTTTCC
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC	ACACTAAGCTTAGTTTCTATTAATAACAAA
AATATCGTTATCTCTAATCTTTTATCAAACCACAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_LT634361.1|WP_100211384.1|2141474_2142637_-|IS3-family-transposase	unknown	unknown	gnl|CDD|222853
NZ_LT634361.1|WP_100211379.1|2130342_2130735_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211390.1|2147679_2148396_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211354.1|2127944_2129050_-|IS3-family-transposase	unknown	unknown	gnl|CDD|372671
NZ_LT634361.1|WP_157926239.1|2143199_2143853_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211389.1|2146511_2147617_+|IS3-family-transposase	unknown	unknown	gnl|CDD|372671
NZ_LT634361.1|WP_100211382.1|2135344_2135674_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_LT634361.1|WP_100211377.1|2124391_2126032_+|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	unknown	unknown	gnl|CDD|274627
NZ_LT634361.1|WP_100211388.1|2145506_2146223_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024742460.1|2134469_2135354_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_LT634361.1|WP_100211391.1|2148402_2149596_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_157926237.1|2131382_2133071_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|366664
NZ_LT634361.1|WP_100211386.1|2143849_2144680_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211383.1|2137614_2141022_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|187774
NZ_LT634361.1|WP_100211378.1|2129146_2130307_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211387.1|2144859_2145504_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_136438668.1|2133078_2133825_-|hypothetical-protein	unknown	unknown	gnl|CDD|375224
NZ_LT634361.1|WP_157926238.1|2143009_2143180_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_024742342.1|2126058_2126802_-|hypothetical-protein	unknown	unknown	unknown
NZ_LT634361.1|WP_100211380.1|2130810_2131386_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_LT634361.1|WP_100211382.1|2135344_2135674_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	8.3e-29	94.9	0.1
NZ_LT634361.1|WP_100211383.1|2137614_2141022_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	3.2e-99	328.1	29.0
NZ_LT634361.1|WP_024742460.1|2134469_2135354_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	2.6e-85	280.6	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_LT634361.1|WP_100211383.1|2137614_2141022_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|187774	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Very large protein containing McrA/HNH-nuclease related domain and a RuvC-like nuclease domain; signature gene for type II.	2.80797e-83
NZ_LT634361.1|WP_100211384.1|2141474_2142637_-|IS3-family-transposase	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.16909e-64
NZ_LT634361.1|WP_157926237.1|2131382_2133071_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|366664	pfam01476, LysM, LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.	6.29145e-10
NZ_LT634361.1|WP_100211354.1|2127944_2129050_-|IS3-family-transposase	gnl|CDD|372671	pfam13683, rve_3, Integrase core domain.	6.81515e-22
NZ_LT634361.1|WP_100211389.1|2146511_2147617_+|IS3-family-transposase	gnl|CDD|372671	pfam13683, rve_3, Integrase core domain.	1.25982e-23
NZ_LT634361.1|WP_100211382.1|2135344_2135674_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.57497e-22
NZ_LT634361.1|WP_100211377.1|2124391_2126032_+|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG	gnl|CDD|274627	TIGR03521, gliding_motility_protein_GldG, gliding-associated putative ABC transporter substrate-binding component GldG. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldG is a protein linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldG abolish the gliding phenotype. GldG, along with GldA and GldF are believed to compose an ABC transporter and are observed as an operon. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.	0
NZ_LT634361.1|WP_136438668.1|2133078_2133825_-|hypothetical-protein	gnl|CDD|375224	pfam17642, TssD, Hemolysin coregulated protein Hcp (TssD). T6SSs are toxin delivery systems. It is a multiprotein complex requiring numerous core proteins (Tss proteins) including cytoplasmic, transmembrane, and outer membrane components. The needle or tube apparatus is comprised of a phage-like complex, similar to the T4 contractile bacteriophage tail, which is thought to be anchored to the membrane by a trans-envelope complex. These tube and trans-envelope sub-assemblies are linked via TssK. This entry comprises family members such as the inner tube protein Hcp (TssD). Hcp proteins form hexamers that stack to form the inner tube/needle structure of the puncturing device. Other functions have also been described for Hcp proteins, for example, some Hcp proteins have been shown to have a chaperone function in that they bind to and stabilize effectors. In addition, there are evolved Hcp proteins that have the Hcp domain at the N-terminal half of the protein and a toxic effector function present in the C-terminal portion of the protein.	1.27941e-10
NZ_LT634361.1|WP_024742460.1|2134469_2135354_+|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.16837e-96

Protein sequences

>NZ_LT634361.1|WP_100211382.1|2135344_2135674_+|CRISPR-associated-endonuclease-Cas2
MDLNAYRVMWLFVFFDLPTATKKDRKNAQLFRKQLLKNGFTMMQFSIYIRHYASSERADVHEKRIQSVLPPYGRISILRITDKQYGNMMNFWGNAQEASPPPVLQLELF
>NZ_LT634361.1|WP_024742460.1|2134469_2135354_+|type-II-CRISPR-associated-endonuclease-Cas1
MIRKTLFFTNKCSLTTQYEQLLITTAHRKTSIPMEDIGFVVIEHQEVYISMPTISKLSDYNIAVIFCNNKHLPQSMLLNLDSHHIQQVHFKNQIAASEPLKKQLWQQIIRTKITNQAILLQKIGKGNTPLLFYAAKVLSGDSNHREAVAAAYYWKNLFDFDFKRARNGCFPNLFLNYGYTVLRAAVARALSGSGLLNTLGIHHHHKYNAFCLADDIMEPYRPLIDKKVLDIMEQFDGTFLTPSIKLALLETLTQTVYFDGKKRPLMVALSVTTSSLQQCFSGKTRKIKYPKLWI
>NZ_LT634361.1|WP_136438668.1|2133078_2133825_-|hypothetical-protein
MPIVAKLYIGNVERILQHVLVEYERYTRKTGRPATETLGGYVTVFFTPKGEEDHILKWMFTHRMEDKTIAYPYNLYTLKNAEVVFYQDDFDGQILFKYKLVDCLPIYYKEYFDVQRGMITELTLSAAIQYFKNLPPLIKSWNESWTPRHEYKPQSMEDTRPRMKCFYTDLEGNTQANPTTGEEIYAVVSTQNLIGQIITIDLSNHTKDFIYNGERIEDDCIKNFHITANTHKIKLKVVAQQEEAINAK
>NZ_LT634361.1|WP_157926237.1|2131382_2133071_-|LysM-peptidoglycan-binding-domain-containing-protein
MSRLTVFPENRLNIKHNRVLDAYFAERISKPEYETVKETYTVKAGDHLSKIAKKKKTTVAKLKKDNNLTSNAIKVGDALIVENQKEKGTKVNFKRLNSAHLGDEVYVLVKTDNLHNYTVAINVKQGKTETPELHGNNSSLLLQHDEGESTLAKAKIGAYAHDNSITNKDDFIDWAIFKITLGSKDNKKEQEALEKLPNKKAFLFLLVDAHSPNNIKVAYNGTNPDKNGELDQRSTPNYWLDMDGNWFELKKGCDCGESLNLKFECVKYTGSSIIQYGPVYFGSISTKTYSGWKKLIENKKVTTEEREIIVAVTKNEGKLDSVQSYDSEIFSVGAIQKTVNIEGKGEFPKQVSRFKKEYPKKFEEYFEDCGWILESDTKMYFKDLNKKLDGSKLKKEIRKGFDSTTYAKKIDCKLLEPIVKVSKDVDFQSLQVVDIQKRLSRVIRLTPKKYNYKIQEFLKSKLGKAVVLDHHINRPAYVKTDLGKALDNFFIKKDKEVEEFNKKEKDKKKHKSKVSRNPNDWENNHSTYEKSILDDYGKNRRMSKSNGKSVAPSRYKHLKAEL
>NZ_LT634361.1|WP_100211380.1|2130810_2131386_-|hypothetical-protein
MIKEFSKLLIIFFVCLNSCKKNEQKETKSVVKLKVENNKIFPKKLKLVEKKIKQDSLIFELNNYIIYFLNKENECWNMLKIKDKVKNQVFLLNTDKSLCFESNSLDDFSPNQKYLTLHSLERGILDVRDKKESIEKYYCIFLDIKNRKLSKRNQEFFCSGEWNSFNEWVIDQEDKYNPVDFFYDIEDKTKW
>NZ_LT634361.1|WP_100211379.1|2130342_2130735_-|hypothetical-protein
MIDVPIGYPYQGSAYFYKRLPNKNKCKVLLFVYLNKEQDCYLPYFELQTINTNDRSIDKLIEVGGKAYECGWDRSFNIDGNYFIKIIDKQSCYDFEEEKEIEQIEYLNKYEIDSTGYFKRLNLPNEPVRN
>NZ_LT634361.1|WP_100211378.1|2129146_2130307_-|hypothetical-protein
MPDREITLNLKQGGDTDALTTTKEPIYVTQNNKKVFAFKAVVGEFSQKSNALNAADFKDHAIAKITLQSTDQQENKQYKDALNKAEGKTSPFYIAMDAEPANQNWFEVKYEEVFDNRPNLWYYGEGNWFELRESDKINEYHIYQDGKIEKFIYGENNSQNKYKYIYHDSSGKEHEICTVKSNVTKEKKNGVTHKTKPTHSKIESDKTVSEGSTERRVKYINGDIAEYGKHPTKGKIWRLYKAKKNDVELVKMPDSLSYKKDGLSIEYKFSSTKRRYTGPECLAGFIGALADLKTQITTTGSCFSEGSCFPSSEHVNGKSVDTIYKWVKKTDQKIINAMDKFHFAKILVGNKKYFSDFDNCEDGGSLHNSHLHSGDFDKNNVKVIKK
>NZ_LT634361.1|WP_100211354.1|2127944_2129050_-|IS3-family-transposase
MRKSKFSPQQIAKILKEYENGRTVEAISREHGVSSATFYKWRSKYAGMNVKELKRLKELEEENRKLKQMYATLALDHQMAKEIIEKKPLKPCVKRSLSIDLSHYGISRACRVLKMSKSVYYYKPKLQDDTPIELALKQKAIDHCEEGFWKAYKRLRNEGNPWNHKRVHRVYVALGLPLRRKVKKRLPARIKEPLIVPTELNQTWSMDFVTDVLENKKRFRGFTIIDDFNREALHIEVDFSLPSNRIVYVLNHLLKRKGKPQKIRMDNGPEFIANLTATWSAMHEIDFKYIEPVKPTQNAFIERFNGSYRRGVLNKYIFENIHQVREQTQIWMHDYNNFRPHDALDDMAPIPYAKQHCVAAAGRILKQD
>NZ_LT634361.1|WP_024742342.1|2126058_2126802_-|hypothetical-protein
MKVKDYFLALILCSFIHCKRVPTYAIAISECLEQSRKDYLSSGKRKLFKNPLRKYLDEKLVGMKMSNLTFKDKKGTTIHLNKTGKPVYIQTFSRRVEQCNRELEALNILVEKYQDKVTFILLINKNHESNPLCNNKLYREKSPEDCTPNKYHPSIHIIYFTTANLEGLEDGYGEMIYGIRNIEYPTCYYLNKNNTIFKITTIEDIIVATNKIALKNSSLHEKELSQKSFESRVPTIINELIAYNATR
>NZ_LT634361.1|WP_100211377.1|2124391_2126032_+|gliding-motility-associated-ABC-transporter-substrate-binding-protein-GldG
MNKKLSPIAFLLFGIFIVTIISRKIYTRIDLTQDKRYTLSSTTKNSIAAIDKQLIINVYLEGDFPAEFQRLQIETRQFLEELRALNPAIYFRFINPDSHRKALVKKGMMPSQLTVEENGKLSNAIIFPWAEITYGHQTETVSLLPNSVAKTQEAQLQNAIEGLEYSFTSAIHTVVKNTKKTIAVLSGNGELEDLNLYSFLSEVGKKYRLAKFTLDSVAVAPEKTLNQLTKYDMAIIAKPTQKFTSEEKFTLDQFIVHGGKTLWMLDNVQADQDSLLVDGKMLAYPRDLNLTDLLFNYGVRVNGTLIKDLYAAKIPLATGTMGNRPQFQHLNWFFHPLVHGNPNHVITKNTAPIRLQFANPIDTLQNGVKKTPLLLSSMFTQTVGTPKIIELASIAKTPQQNAYKGGHQLFAVLLEGAFTSAYKSRVHPFTTPLFMAKGMPNKMIVIADGDVGKNQILKGKPTDLSIDKWTGEQFGNKDFLLNAVDYLLDDNGIIDLRNKAIQINHLNKQRAYNERTFWQFFNIGLPLLVLFVFGFGFNYWRKKKYS
>NZ_LT634361.1|WP_100211383.1|2137614_2141022_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MSTILGLDLGTNSIGWALINNTTSKIIGVGSRVFSEGVVDLGGGEGKEMSKNASRTVARGVRRQLFRRRLRKRYLLKELAKHQLCPIAPEALENWNQTTVFDTEVLKKWFQLNPYELRAKAIKAPISLHEIGRIFYHMIQRRGFLSNSRSAGAATKETSAIFKGDLKQEKVGIASTQQSIAQSITLGSYLHTIQPKEHAPYVKKVARIRNRYTTRQMYIDEFEMIWEFQKQFHAVLTNSLKTHLGGRKKDGYKKDGILFHQRPLRSQKHLVGNCTLEPKKTKASISSIPFEYFRIYQWINTLACDFNGNHHPISQKERHQIITLLLSAEKVAFKKIRKAIGKTEKEYQFNYKDDAIIYGTHTISNLSNKKFFGKQWFNFTQEEQENIWHILSFFDDREKLKNYAMTHWQFTEEKAIKISKFNLKEGYANLSRKAINGILPFLKEGFMYDVAVALAGVKNALGNTWQTHQEFVKNNVPEIVRANIKGGYLAPLKKMLAATLACTPTQLKKLYHHSSAIKATTIAPKLPVGDIADKEIQKIKNPIVIKALFEVRKLVNELITTYGKPDEIKIELARDLKTSKKNRYEIRKQQQFLEKENNRIQKELENLAQRATPTNILKYKLWEECNHTCPYTNTKIPIHKLFTGEIQIEHIYPWSRSLNDSFMNKTLCYANENRAKKNKTPYEFYHDEQGEEKWAQVKQQALACFKNKYPNYPNAYNKFKHFVQKKREEDFVSRQLNDTRYISKEAKNYLSKISNNVLVASGQATAALRHHWGLNSILNEVENAKTRHDHRHHAIDALVMACITAGHVQALSQWNRYDRNYELKDFAMPWPSFRVDAAVAITGILVSHKKEKKLLTVRKHTVIKNGQPYTNKGIAARGLLHKESVYGKRKAPGKEEAYHIRKPIESITTEKKLEKVVDPTIKNLIFKRIQKLGGFVKGKIPSETFYKLAENGQRVPQIFLPNKNGAPVPIKKVRIREVIGKAVPLKNTVNQYVNPKNNHHILIYKNAKGIMEEEVVSFWEAVERKKQEIDVFKMPKKGKEKLAILQKNDMFVLGLDIETVEEAWQDNSLLKEHLYKVQKISSKDYSFRKHSDARPDEAAKKEYIRITSLGEGKKGWKTMNPIKVKLNSIGKIVKA
>NZ_LT634361.1|WP_100211384.1|2141474_2142637_-|IS3-family-transposase
MAKKYDNDFKVMLVELLKSGRKAKSLSEEYGVNDGVIRRWKREYEAKSGDFSKKRELSVEAQELKALKKELREVKLERDIFKKGSEHLLQERQMRYKFILKNVSVYPVEKMCKCMKVSKNAYYYWLKHKDVIKILPSKVLLKKRIKFHFEQSREIYGSYRIQKMLEREGLVYARSYIGLLMKELGLKSILKRKYVATTNSNHNLSIAKNELDRNFTSLKLGEKWVSDITYIRVNDHWNYLTTIIDLADKRVVGWSLSKDMTTENTIMKAWNLASNNRAITNKFIFHSDRGVQYASNKITNLFSFNRKITQSMSRKGNCWDNAVAESFFKTIKHEWLYRFKYSSYKQLFSSIEDYINWYNNERLHSSLGYISPLEMEVKIRMNFNKAA
>NZ_LT634361.1|WP_157926238.1|2143009_2143180_-|hypothetical-protein
MQLILKIMPLLKSPYNTDQQENKQYKDALNKAEGKTSPFYIAMDAEPVHQNWFEVQ
>NZ_LT634361.1|WP_157926239.1|2143199_2143853_-|hypothetical-protein
MKYLLSIISLTVMFLSACKSQNSEKKISVYESIISKNEFDNNNALSRFQLEKKNKNDTITNLFLNNGETIFFKDNLGTPYDENSIQYRKVQSKKATKFIISVQEYERDYFLLLDKDDKSIDTIPSYPYFSKDKNIIFVVDYNPYETYNDIFPPSEDVYIYKYVKKQLQKVYFKPYHFFSDTYLESFFWKDQNILYLKFISEKDRKKAKYISLTILSQ
>NZ_LT634361.1|WP_100211386.1|2143849_2144680_-|hypothetical-protein
MDAEPVHQNWFEVQYEEVFDNRPNLWYYGEGNWFELRATQKLNLPTFYIYDNGKIEKRIPKTIEEKYKKKYQYLFIDKKKNEHDLGIFKYKTIKNKYGALYGGKTVDLINIDQLENYKSDDGKTKFEIKINSSRKYLNSKTLASLLGAMLSCGYKDFVFNGFSHSNGGSKPSVSHKNGYNGDFRYLRDNKKGGKTDLSVDNKSIGWKGLDEIRQNKFHDELFKFGWKSMISQYYGERNEKGESTKLLNHCKNDKKNNHNDHLHIQSYKPDYTEVKE
>NZ_LT634361.1|WP_100211387.1|2144859_2145504_-|hypothetical-protein
MKNNFIFLFSCFLALLFSCKEKKSEKNIAKKQKNDSLFIPKYAIAKPNYQSIFPKKINKKLIGDYKSTQLKLKKGFLEDPLDDNSDVYGHPDYDYDGLTTWVSSKNSREEIGFHAKKISKYYGFYYENNKLLLVTETFEDIKDSLFFNNDKIFLWKNTNNLFVTDSIFLDAKSKYIKRLDKEIRKIKNSGFTEYIDRYIYKKDSLSSFVIGNLK
>NZ_LT634361.1|WP_100211388.1|2145506_2146223_-|hypothetical-protein
MKVDNILNIYHTGEISKLDFKGLKEVSYVYHDKNGGKHNLGTFDVVKAQKWKKGSSIYKKEWKKIKVGKDVRYYKYDIGKVPLIKLKLPISYDKNGIKITLKDNTDREYINPEAYACLLGALAENDYKDVAINGFTSKDGTGAPSVSHYNGIAGDFRYLRKDKRNTALHINTSPNDLDVDRTEKFIDALIKFGWSSFYSYDIILNKKTFRLKESHTTHLAHHHHHLHLRKENFNPNYK
>NZ_LT634361.1|WP_100211389.1|2146511_2147617_+|IS3-family-transposase
MRKSKFSPQQIAKILKEYENGRTVEAISREHGVSSATFYKWRSKYAGMNVKELKRLKELEEENRKLKQMYATLALDHQMAKEIIEKKPLKPCVKRSLSIDLSHYGISRACRVLKMSKSVYYYKPKLQDDTPIELALKQKAIDHCEEGFWKAYKRLRNEGNPWNHKRVHRVYVALGLPLRRKVKKRLPARIKEPLIVPTELNQTWSMDFVTDVLENKKRFRGFTIIDDFNREALHIEVDFSLPSNRIVYVLNHLLKRKGKPQKIRMDNGPEFIANLTATWSAMHEIDFKYIEPGKPTQNAFIERFNGSYRRGVLNKYIFENIHQVREQTQIWMHDYNNFRPHDALDDMAPIPYAKQHCVAAAGRILKQD
>NZ_LT634361.1|WP_100211390.1|2147679_2148396_-|hypothetical-protein
MKYKYILIILFSFFSCEIQLNKKKSRKKFVVNNLNKDEFNSNKNCILKENLKIYDNQFLVNLKDFNIIFKNVRSIDAPSLDFEIANKRNTVVIHQKYLESEFLGDNEFMIQSKSINSIKVKCLIRVDFVFFAEEKKQIALNLAKNIEEEMFCENEIYKISEPVLNFEEEFIEVAKKINKDYWTNVSMSNSYGEIDKKKAKSILKRIENNNMMNSEELFIEKSILSTSYCRLPLFRTDY
>NZ_LT634361.1|WP_100211391.1|2148402_2149596_-|hypothetical-protein
MVDAHSPNNIKVAYNGTNPDKNGELDQRSTPNYWLDMDGNWFELKKGCDCRDILNLKQGGDTDALTTTKEPIYVTQNNKKVFAFKAVVGEFSQKSNALNAADFKDHAIAKITLQSTDQQENKQYKDALNKAEGKTSPFYIAMDAEPVHQNWFEVKYEEVFDNRPNLWYYGEGNWFELKVKIDNSQYYICKTGNIKLIKGKNLKNDYLIETNSGNFKLIYTLEENSYGLVKFPASGNGFNRYGTIDKGDKNHGAGDHYLLPKTAASIFGVINEIHNKGWEIHLGDMSSEDGKDPWQPGSKHHSGHGGKRGRKGLDIDFRYLNKKGVSFHGNNDQSDFSKEKNKIFFEIAYKYGFRKNYCTNMKTVLGENIKGTKDISYHKDHGHIGLSNQQIETIKSI

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_LT634361_6	6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136196-2136224	29	NZ_LT634361.1	2750681-2750709	0	1.0
NZ_LT634361_6	6.12|2136721|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136721-2136750	30	NZ_LT634361.1	3312494-3312523	0	1.0
NZ_LT634361_6	6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136787-2136816	30	NZ_LT634361.1	2690529-2690558	0	1.0
NZ_LT634361_6	6.19|2137183|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137183-2137212	30	NZ_LT634361.1	324467-324496	0	1.0
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_LT634361.1	1321013-1321039	2	0.926

1. spacer 6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to position: 2750681-2750709, mismatch: 0, identity: 1.0

caaaaaattgtaatttcaagaagtttaat	CRISPR spacer
caaaaaattgtaatttcaagaagtttaat	Protospacer
*****************************

2. spacer 6.12|2136721|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to position: 3312494-3312523, mismatch: 0, identity: 1.0

aagagttaaaaaccaaagagtacgaatatg	CRISPR spacer
aagagttaaaaaccaaagagtacgaatatg	Protospacer
******************************

3. spacer 6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to position: 2690529-2690558, mismatch: 0, identity: 1.0

tacgggtaataccataatccattaattctt	CRISPR spacer
tacgggtaataccataatccattaattctt	Protospacer
******************************

4. spacer 6.19|2137183|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to position: 324467-324496, mismatch: 0, identity: 1.0

ctcgtggttggttttatacattacacgcaa	CRISPR spacer
ctcgtggttggttttatacattacacgcaa	Protospacer
******************************

5. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to position: 1321013-1321039, mismatch: 2, identity: 0.926

ctcattttttgtacagtgtttttttcc	CRISPR spacer
ctccttttttgtacagtctttttttcc	Protospacer
*** ************* *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_LT634361_6	6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136064-2136093	30	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	28026-28055	0	1.0
NZ_LT634361_6	6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136064-2136093	30	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	28054-28083	0	1.0
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP019525	Tenacibaculum phage PTm5 DNA, complete genome	167799-167828	2	0.933
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP019524	Tenacibaculum phage PTm1 DNA, complete genome	166740-166769	2	0.933
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP026413	Acinetobacter sp. ACNIH2 plasmid pACI-35f6, complete sequence	1981-2010	2	0.933
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP044467	Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-4, complete sequence	7518-7547	2	0.933
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP044448	Acinetobacter indicus strain CMG3-2 plasmid pCMG3-2-3, complete sequence	4016-4045	2	0.933
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MN855776	Siphoviridae sp. isolate 36, complete genome	38277-38306	5	0.833
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MN693051	Marine virus AFVG_25M152, complete genome	51216-51245	5	0.833
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MN693582	Marine virus AFVG_25M154, complete genome	8376-8405	5	0.833
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MN693500	Marine virus AFVG_25M151, complete genome	8374-8403	5	0.833
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MN693522	Marine virus AFVG_25M153, complete genome	8378-8407	5	0.833
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP033124	Acinetobacter wuhouensis strain WCHAW010062 plasmid p4_010062, complete sequence	2715-2744	5	0.833
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NC_006872	Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence	35165-35194	5	0.833
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP013044	Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence	40679-40708	5	0.833
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP023318	Bacillus megaterium strain A plasmid p1, complete sequence	109226-109255	5	0.833
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_AP019369	Silvanigrellales bacterium RF1110005 plasmid 79K, complete sequence	33605-33631	6	0.778
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_AP019369	Silvanigrellales bacterium RF1110005 plasmid 79K, complete sequence	48702-48728	6	0.778
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_CP039155	Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-12, complete sequence	5448-5474	6	0.778
NZ_LT634361_6	6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136064-2136093	30	NC_017507	Marinobacter adhaerens HP15 plasmid pHP-187, complete sequence	159594-159623	6	0.8
NZ_LT634361_6	6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136064-2136093	30	NC_009927	Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence	21524-21553	6	0.8
NZ_LT634361_6	6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136196-2136224	29	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	246450-246478	6	0.793
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP019901	Raoultella planticola strain GODA plasmid unnamed2	4469-4497	6	0.793
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP026187	Enterobacteriaceae bacterium ENNIH2 plasmid unnamed, complete sequence	4419-4447	6	0.793
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	CP052219	Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-2, complete sequence	66004-66032	6	0.793
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP024642	Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence	124338-124366	6	0.793
NZ_LT634361_6	6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136787-2136816	30	NZ_CP020115	Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence	45241-45270	6	0.8
NZ_LT634361_6	6.17|2137051|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137051-2137080	30	NZ_CP015743	Shinella sp. HZN7 plasmid pShin-07, complete sequence	106931-106960	6	0.8
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP013817	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S44-C148, *** SEQUENCING IN PROGRESS ***	10138-10167	6	0.8
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NC_048074	Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome	78649-78678	6	0.8
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	MH800199	Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome	78867-78896	6	0.8
NZ_LT634361_6	6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137315-2137344	30	MN033157	Leviviridae sp. isolate H4_Bulk_46_scaffold_2300_e_1158 RNA-dependent RNA polymerase (H4Bulk462300e1158_000001) gene, partial cds; and hypothetical protein (H4Bulk462300e1158_000002) and hypothetical protein (H4Bulk462300e1158_000003) genes, complete cds	2264-2293	6	0.8
NZ_LT634361_6	6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136064-2136093	30	NZ_CP045343	Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence	32744-32773	7	0.767
NZ_LT634361_6	6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136196-2136224	29	NZ_CP009624	Staphylococcus agnetis strain 908 plasmid unamed, complete sequence	6137-6165	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039210	Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence	100398-100426	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP048067	Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence	87127-87155	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038894	Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence	104624-104652	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038953	Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence	171337-171365	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038958	Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence	125547-125575	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP029155	Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence	71483-71511	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP013763	Piscirickettsia salmonis strain PM21567A plasmid p1PS2, complete sequence	23893-23921	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP013779	Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence	45661-45689	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039205	Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence	42438-42466	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039042	Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence	103666-103694	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038948	Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence	165446-165474	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039036	Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence	103666-103694	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038963	Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence	103666-103694	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	521094-521122	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	41014-41042	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MF547662	Clostridioides phage LIBA6276, complete genome	21648-21676	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MF547663	Clostridioides phage LIBA2945, complete genome	21648-21676	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MT774386	CrAssphage cr110_1, complete genome	78672-78700	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038924	Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence	65447-65475	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039196	Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence	99917-99945	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038812	Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence	46237-46265	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP013769	Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence	147919-147947	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP033942	Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence	135502-135530	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP013761	Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence	154382-154410	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP013774	Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence	86228-86256	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NC_012040	Campylobacter lari RM2100 plasmid pCL2100, complete sequence	9359-9387	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP050945	Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence	136757-136785	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038892	Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence	65447-65475	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038968	Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence	46239-46267	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039202	Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence	45579-45607	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039182	Piscirickettsia salmonis strain Psal-158 plasmid unnamed1, complete sequence	45580-45608	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039187	Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence	45580-45608	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038933	Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence	106114-106142	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038973	Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence	65735-65763	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039066	Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence	45580-45608	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP039215	Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence	46185-46213	7	0.759
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP038877	Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence	46186-46214	7	0.759
NZ_LT634361_6	6.9|2136525|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136525-2136554	30	NZ_LN774770	Lactococcus piscium MKFS47 plasmid II, complete sequence	15291-15320	7	0.767
NZ_LT634361_6	6.9|2136525|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136525-2136554	30	MK931445	Klebsiella phage Shelby, complete genome	38962-38991	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	17159-17188	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_019507	Campylobacter phage CP21, complete genome	17514-17543	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	AP013512	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C84-MedDCM-OCT-S29-C65	30584-30613	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	HE815464	Campylobacter phage CP21 complete sequence	17514-17543	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	MK250029	Prevotella phage Lak-C1, complete genome	134680-134709	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_CP021873	Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence	38912-38941	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_CP017963	Virgibacillus halodenitrificans strain PDB-F2 plasmid unnamed1, complete sequence	21263-21292	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	MH617121	Microviridae sp. isolate ctdb231, complete genome	1659-1688	7	0.767
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	AP013513	Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C84-MedDCM-OCT-S32-C77	22686-22715	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP014451	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S28-C165, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces	335-364	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	CAJCJZ010000002	Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence	75659-75688	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	MN693584	Marine virus AFVG_25M163, complete genome	8702-8731	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NC_017472	Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence	66254-66283	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NC_047948	Staphylococcus phage phiSA_BS2, complete genome	44046-44075	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP013803	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S26-C126, *** SEQUENCING IN PROGRESS ***	7622-7651	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP013815	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S43-C158, *** SEQUENCING IN PROGRESS ***	5543-5572	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	AP013820	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S46-C98, *** SEQUENCING IN PROGRESS ***	16450-16479	7	0.767
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NZ_CP027420	Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence	17042-17071	7	0.767
NZ_LT634361_6	6.23|2137447|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137447-2137476	30	KX229736	Campylobacter phage PC5, complete genome	92508-92537	7	0.767
NZ_LT634361_6	6.24|2137513|29|NZ_LT634361|CRISPRCasFinder,CRT	2137513-2137541	29	MN693555	Marine virus AFVG_25M96, complete genome	4041-4069	7	0.759
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_CP032413	Paenibacillus lautus strain E7593-69 plasmid pAZOPL1, complete sequence	25166-25192	8	0.704
NZ_LT634361_3	3.1|1741267|27|NZ_LT634361|CRISPRCasFinder	1741267-1741293	27	NZ_CP020864	Paenibacillus sp. Cedars plasmid unnamed1, complete sequence	190579-190605	8	0.704
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MK448487	Streptococcus satellite phage Javan419, complete genome	2436-2465	8	0.733
NZ_LT634361_6	6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136327-2136356	30	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	139908-139937	8	0.733
NZ_LT634361_6	6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136327-2136356	30	NC_019526	Enterobacteria phage vB_KleM-RaK2, complete genome	4730-4759	8	0.733
NZ_LT634361_6	6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136327-2136356	30	MT708547	Klebsiella phage Muenster, complete genome	126827-126856	8	0.733
NZ_LT634361_6	6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136327-2136356	30	AB897757	Klebsiella phage K64-1 DNA, complete genome	4730-4759	8	0.733
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MK250029	Prevotella phage Lak-C1, complete genome	144451-144479	8	0.724
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MK250016	Prevotella phage Lak-A1, complete genome	185431-185459	8	0.724
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MK250019	Prevotella phage Lak-A2, complete genome	107308-107336	8	0.724
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NZ_CP016596	Bacillus cereus strain K8 plasmid pBCM301, complete sequence	50590-50618	8	0.724
NZ_LT634361_6	6.10|2136591|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136591-2136619	29	NZ_CP009619	Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence	317228-317256	8	0.724
NZ_LT634361_6	6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136787-2136816	30	KP836355	Marinitoga camini virus 1, complete genome	36580-36609	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_017383	Helicobacter pylori v225d plasmid pHPv225d, complete sequence	1902-1931	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_KM583823	Helicobacter pylori strain UM426 plasmid pUM426, complete sequence	3068-3097	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_KM583818	Helicobacter pylori strain UM171 plasmid pUM171, complete sequence	3121-3150	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_KM583819	Helicobacter pylori strain UM196 plasmid pUM196, complete sequence	3091-3120	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_KM583816	Helicobacter pylori strain UM146 plasmid pUM146, complete sequence	3884-3913	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_KM583812	Helicobacter pylori strain UM096 plasmid pUM096, complete sequence	3142-3171	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_005917	Helicobacter pylori plasmid pAL202, complete sequence	5315-5344	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_004950	Helicobacter pylori plasmid pHel4 complete sequence	606-635	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_001476	Helicobacter pylori plasmid pHPM186, complete sequence	8594-8623	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_CP049810	Acinetobacter pittii strain A1254 plasmid pA1254_4, complete sequence	2194-2223	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NZ_CP053257	Helicobacter pylori A45 plasmid unnamed, complete sequence	3054-3083	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_011334	Helicobacter pylori G27 plasmid pHPG27, complete sequence	4275-4304	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_004845	Helicobacter pylori plasmid pHPM8, complete sequence	3948-3977	8	0.733
NZ_LT634361_6	6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136853-2136882	30	NC_017373	Helicobacter pylori SouthAfrica7 plasmid, complete sequence	6893-6922	8	0.733
NZ_LT634361_6	6.16|2136985|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136985-2137014	30	MT774380	CrAssphage cr1_1, complete genome	96577-96606	8	0.733
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	MK804893	Aeromonas phage 2-L372D, complete genome	79118-79147	8	0.733
NZ_LT634361_6	6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137249-2137278	30	NC_048770	Aeromonas phage 2_L372X, complete genome	75065-75094	8	0.733
NZ_LT634361_6	6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137381-2137410	30	LN881738	Escherichia phage slur17, complete genome	5408-5437	8	0.733
NZ_LT634361_6	6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137381-2137410	30	KU057941	Clostridium phage CDSH1, complete genome	15000-15029	8	0.733
NZ_LT634361_6	6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137381-2137410	30	HM568888	Clostridium phage phiCD38-2, complete genome	14496-14525	8	0.733
NZ_LT634361_6	6.23|2137447|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137447-2137476	30	NZ_CP014175	Clostridium argentinense strain 89G plasmid pRSJ17_1, complete sequence	7840-7869	8	0.733
NZ_LT634361_6	6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136130-2136159	30	MG945885	UNVERIFIED: Microviridae sp. isolate 1113-1602, partial genome	3455-3484	9	0.7
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	NC_017182	Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB05, complete sequence	2959-2987	9	0.69
NZ_LT634361_6	6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2136393-2136421	29	MK448930	Streptococcus phage Javan406, complete genome	33533-33561	9	0.69
NZ_LT634361_4	4.2|1896988|34|NZ_LT634361|CRISPRCasFinder	1896988-1897021	34	NZ_CP038259	Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence	31982-32015	10	0.706
NZ_LT634361_4	4.2|1896988|34|NZ_LT634361|CRISPRCasFinder	1896988-1897021	34	NZ_CP038259	Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence	34548-34581	10	0.706
NZ_LT634361_6	6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137315-2137344	30	NZ_CP013280	Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence	23961-23990	10	0.667
NZ_LT634361_6	6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137315-2137344	30	NZ_CP039726	Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence	33011-33040	10	0.667
NZ_LT634361_6	6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137315-2137344	30	NZ_CP009350	Bacillus thuringiensis HD1002 plasmid 4, complete sequence	52791-52820	10	0.667
NZ_LT634361_6	6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR	2137315-2137344	30	NC_018510	Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence	135561-135590	10	0.667

1. spacer 6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aatcgctggaacatatttttgcgcactacc	CRISPR spacer
aatcgctggaacatatttttgcgcactacc	Protospacer
******************************

2. spacer 6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 0, identity: 1.0

aatcgctggaacatatttttgcgcactacc	CRISPR spacer
aatcgctggaacatatttttgcgcactacc	Protospacer
******************************

3. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP019525 (Tenacibaculum phage PTm5 DNA, complete genome) position: , mismatch: 2, identity: 0.933

taattcacttaattttacgttttttaattt	CRISPR spacer
tagttcacttaactttacgttttttaattt	Protospacer
**.*********.*****************

4. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP019524 (Tenacibaculum phage PTm1 DNA, complete genome) position: , mismatch: 2, identity: 0.933

taattcacttaattttacgttttttaattt	CRISPR spacer
tagttcacttaactttacgttttttaattt	Protospacer
**.*********.*****************

5. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026413 (Acinetobacter sp. ACNIH2 plasmid pACI-35f6, complete sequence) position: , mismatch: 2, identity: 0.933

taattc-acttaattttacgttttttaattt	CRISPR spacer
-aattcgaattaattttacgttttttaattt	Protospacer
 ***** * **********************

6. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044467 (Acinetobacter schindleri strain HZE23-1 plasmid pHZE23-1-4, complete sequence) position: , mismatch: 2, identity: 0.933

taattc-acttaattttacgttttttaattt	CRISPR spacer
-aattcgaattaattttacgttttttaattt	Protospacer
 ***** * **********************

7. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP044448 (Acinetobacter indicus strain CMG3-2 plasmid pCMG3-2-3, complete sequence) position: , mismatch: 2, identity: 0.933

taattc-acttaattttacgttttttaattt	CRISPR spacer
-aattcgaattaattttacgttttttaattt	Protospacer
 ***** * **********************

8. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN855776 (Siphoviridae sp. isolate 36, complete genome) position: , mismatch: 5, identity: 0.833

taaca-aggtttataatgcttttggtaaacg	CRISPR spacer
-accacagctttataatgctattggtaaact	Protospacer
 * ** ** *********** ********* 

9. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN693051 (Marine virus AFVG_25M152, complete genome) position: , mismatch: 5, identity: 0.833

taacaaggtttataatgcttttggtaaacg-	CRISPR spacer
taaccacgtttataatgcttttga-aagcgc	Protospacer
**** * ****************. **.** 

10. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN693582 (Marine virus AFVG_25M154, complete genome) position: , mismatch: 5, identity: 0.833

taacaaggtttataatgcttttggtaaacg-	CRISPR spacer
taaccacgtttataatgcttttga-aagcgc	Protospacer
**** * ****************. **.** 

11. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN693500 (Marine virus AFVG_25M151, complete genome) position: , mismatch: 5, identity: 0.833

taacaaggtttataatgcttttggtaaacg-	CRISPR spacer
taaccacgtttataatgcttttga-aagcgc	Protospacer
**** * ****************. **.** 

12. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN693522 (Marine virus AFVG_25M153, complete genome) position: , mismatch: 5, identity: 0.833

taacaaggtttataatgcttttggtaaacg-	CRISPR spacer
taaccacgtttataatgcttttga-aagcgc	Protospacer
**** * ****************. **.** 

13. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033124 (Acinetobacter wuhouensis strain WCHAW010062 plasmid p4_010062, complete sequence) position: , mismatch: 5, identity: 0.833

taattcacttaattttacgttttttaattt	CRISPR spacer
aaatcagattaattttacgttttttaattt	Protospacer
 ***. . **********************

14. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_006872 (Clostridium perfringens plasmid pBCNF5603 DNA, complete sequence) position: , mismatch: 5, identity: 0.833

taattcacttaattttacgttttttaattt	CRISPR spacer
tatttattttaattttactttttttaattt	Protospacer
** **  .********** ***********

15. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013044 (Clostridium perfringens strain JP55 plasmid pJFP55J, complete sequence) position: , mismatch: 5, identity: 0.833

taattcacttaattttacgttttttaattt	CRISPR spacer
tatttattttaattttactttttttaattt	Protospacer
** **  .********** ***********

16. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023318 (Bacillus megaterium strain A plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.833

taattcacttaattttacgttttttaattt	CRISPR spacer
tagtatacttaagttaacgttttttaattt	Protospacer
**.* .****** ** **************

17. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to NZ_AP019369 (Silvanigrellales bacterium RF1110005 plasmid 79K, complete sequence) position: , mismatch: 6, identity: 0.778

ctcattttttgtacagtgtttttttcc	CRISPR spacer
ctcattttttggacagggtttttcgga	Protospacer
*********** **** ******.   

18. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to NZ_AP019369 (Silvanigrellales bacterium RF1110005 plasmid 79K, complete sequence) position: , mismatch: 6, identity: 0.778

ctcattttttgtacagtgtttttttcc	CRISPR spacer
ctcattttttggacagggtttttcgga	Protospacer
*********** **** ******.   

19. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to NZ_CP039155 (Acinetobacter sp. 10FS3-1 plasmid p10FS3-1-12, complete sequence) position: , mismatch: 6, identity: 0.778

ctcattttttgtacagtgtttttttcc	CRISPR spacer
accattttttgtacagtgttaattttt	Protospacer
 .******************  ***..

20. spacer 6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_017507 (Marinobacter adhaerens HP15 plasmid pHP-187, complete sequence) position: , mismatch: 6, identity: 0.8

aatcgctggaacatatttttgcgcactacc-	CRISPR spacer
aatcactggaacatatttttg-gcgatatgg	Protospacer
****.**************** **. **.  

21. spacer 6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_009927 (Acaryochloris marina MBIC11017 plasmid pREB2, complete sequence) position: , mismatch: 6, identity: 0.8

aatcgc-tggaacatatttttgcgcactacc	CRISPR spacer
-gccgcagggaacatattttggcccactacc	Protospacer
 ..***  ************ ** *******

22. spacer 6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 6, identity: 0.793

caaaaaattgtaatttcaagaagtttaat	CRISPR spacer
ttgataattgtaatttaaagaagattaat	Protospacer
. .* *********** ****** *****

23. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP019901 (Raoultella planticola strain GODA plasmid unnamed2) position: , mismatch: 6, identity: 0.793

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaagagattaatatttttaatcataat	Protospacer
*****.*************.**** *  .

24. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP026187 (Enterobacteriaceae bacterium ENNIH2 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaagagattaatatttttaatcataat	Protospacer
*****.*************.**** *  .

25. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to CP052219 (Klebsiella pneumoniae strain E17KP0053 plasmid pE17KP0053-2, complete sequence) position: , mismatch: 6, identity: 0.793

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
gtaaaaacattattattttcaatcaacct	Protospacer
 ****** **** ***********  **.

26. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP024642 (Klebsiella michiganensis strain F107 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.793

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
gtaaaaacattattattttcaatcaacct	Protospacer
 ****** **** ***********  **.

27. spacer 6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020115 (Nodularia spumigena UHCC 0039 plasmid pUHCC0039a, complete sequence) position: , mismatch: 6, identity: 0.8

tacgggtaataccataatccattaattctt	CRISPR spacer
aatgggtaataccatagtccataaatttat	Protospacer
 *.*************.***** ****. *

28. spacer 6.17|2137051|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015743 (Shinella sp. HZN7 plasmid pShin-07, complete sequence) position: , mismatch: 6, identity: 0.8

tatgtaatgtagtaagctcctccgctatct	CRISPR spacer
tgagcaatgtagaaagctcctccgctactt	Protospacer
*. *.******* **************..*

29. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013817 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S44-C148, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 6, identity: 0.8

taattcacttaattttacgttttttaattt	CRISPR spacer
ttcagcacttaattttacgttttttaaaat	Protospacer
*    **********************  *

30. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_048074 (Acinetobacter phage vB_AbaM_B09_Aci01-1, complete genome) position: , mismatch: 6, identity: 0.8

taattcacttaattttacgttttttaattt	CRISPR spacer
tcattctcttaattttacgttgtttacgat	Protospacer
* **** ************** ****   *

31. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MH800199 (Acinetobacter phage vB_AbaM_B09_Aci02-2, complete genome) position: , mismatch: 6, identity: 0.8

taattcacttaattttacgttttttaattt	CRISPR spacer
tcattctcttaattttacgttgtttacgat	Protospacer
* **** ************** ****   *

32. spacer 6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN033157 (Leviviridae sp. isolate H4_Bulk_46_scaffold_2300_e_1158 RNA-dependent RNA polymerase (H4Bulk462300e1158_000001) gene, partial cds; and hypothetical protein (H4Bulk462300e1158_000002) and hypothetical protein (H4Bulk462300e1158_000003) genes, complete cds) position: , mismatch: 6, identity: 0.8

---caaaccatctaaatcaacgtgaaaggtatc	CRISPR spacer
attca---catcttaatcaacgtgaaatgtatg	Protospacer
   **   ***** ************* **** 

33. spacer 6.2|2136064|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP045343 (Vibrio sp. THAF190c plasmid pTHAF190c_e, complete sequence) position: , mismatch: 7, identity: 0.767

aatcgctggaacatatttttgcgcactacc	CRISPR spacer
cctcgctggaatatgtttttgcgcactttt	Protospacer
  *********.**.************ ..

34. spacer 6.4|2136196|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009624 (Staphylococcus agnetis strain 908 plasmid unamed, complete sequence) position: , mismatch: 7, identity: 0.759

caaaaaattgtaatttcaagaagtttaat	CRISPR spacer
aaaaaaattgtaaatgcaagaagtcgaga	Protospacer
 ************ * ********. *. 

35. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039210 (Piscirickettsia salmonis strain Psal-103 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

36. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP048067 (Piscirickettsia salmonis strain Ps-8079A plasmid Ps8079A-p1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

37. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038894 (Piscirickettsia salmonis strain Psal-006a plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

38. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038953 (Piscirickettsia salmonis strain Psal-040 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

39. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038958 (Piscirickettsia salmonis strain Psal-041 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

40. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029155 (Clostridioides difficile strain CD161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
tgaaaaagattaagattttcaatagtaat	Protospacer
* *********** *********  *  .

41. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013763 (Piscirickettsia salmonis strain PM21567A plasmid p1PS2, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

42. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013779 (Piscirickettsia salmonis strain PM51819A plasmid p1PS5, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

43. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039205 (Piscirickettsia salmonis strain Psal-182 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

44. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039042 (Piscirickettsia salmonis strain Psal-072 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

45. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038948 (Piscirickettsia salmonis strain Psal-028 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

46. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039036 (Piscirickettsia salmonis strain Psal-071 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

47. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038963 (Piscirickettsia salmonis strain Psal-051 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

48. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagaatattattttcaattttaaa	Protospacer
********* ** **********..*   

49. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaaaattaattttttcaatagtgtt	Protospacer
*******.****** ********  * ..

50. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
tgaaaaagattaagattttcaatagtaat	Protospacer
* *********** *********  *  .

51. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
tgaaaaagattaagattttcaatagtaat	Protospacer
* *********** *********  *  .

52. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MT774386 (CrAssphage cr110_1, complete genome) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ataaaatgattaatatattcaatcatttt	Protospacer
 ***** ********* ******* *...

53. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038924 (Piscirickettsia salmonis strain Psal-011 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

54. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039196 (Piscirickettsia salmonis strain Psal-161 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

55. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038812 (Piscirickettsia salmonis strain Psal-001 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

56. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013769 (Piscirickettsia salmonis strain PM23019A plasmid p1PS3, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

57. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP033942 (Piscirickettsia salmonis strain EM-90 plasmid pPSEM90-5, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

58. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013761 (Piscirickettsia salmonis strain AY6492A plasmid p4PS1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

59. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013774 (Piscirickettsia salmonis strain PM37984A plasmid p1PS4, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

60. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_012040 (Campylobacter lari RM2100 plasmid pCL2100, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
acaaaaaaattaattttttcaatccccaa	Protospacer
 .*****.****** **********.*  

61. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050945 (Piscirickettsia salmonis strain Ps-2192A plasmid Ps2192A-p7, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

62. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038892 (Piscirickettsia salmonis strain Psal-005 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

63. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038968 (Piscirickettsia salmonis strain Psal-068 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

64. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039202 (Piscirickettsia salmonis strain Psal-163 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

65. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039182 (Piscirickettsia salmonis strain Psal-158 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

66. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039187 (Piscirickettsia salmonis strain Psal-159 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

67. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038933 (Piscirickettsia salmonis strain Psal-025 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

68. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038973 (Piscirickettsia salmonis strain Psal-069 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

69. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039066 (Piscirickettsia salmonis strain Psal-107 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

70. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039215 (Piscirickettsia salmonis strain Psal-104a plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

71. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP038877 (Piscirickettsia salmonis strain Psal-002 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagatttatatcttcaatagtgat	Protospacer
*********** ****.******  *  .

72. spacer 6.9|2136525|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_LN774770 (Lactococcus piscium MKFS47 plasmid II, complete sequence) position: , mismatch: 7, identity: 0.767

tacgtccgtttaagacaatcatttttttct	CRISPR spacer
tcctaaagtttaagacaattattttttttt	Protospacer
* *    ************.********.*

73. spacer 6.9|2136525|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK931445 (Klebsiella phage Shelby, complete genome) position: , mismatch: 7, identity: 0.767

tacgtccgtttaagacaatcatttttttct	CRISPR spacer
caccagcgtttaaggcaatcagttttttcg	Protospacer
.**   ********.****** ******* 

74. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_HG813246 (Staphylococcus epidermidis PM221 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
taaatcacgtttaaaaaataaaatgattat	Protospacer
*******.******* ********.   * 

75. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_019507 (Campylobacter phage CP21, complete genome) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
taaatcatttttaaacaatataaaaaaagt	Protospacer
******** *********** ** * .*. 

76. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013512 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C84-MedDCM-OCT-S29-C65) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
tatctttgctttaaataataaaatatgaaa	Protospacer
**  *.   ******.**************

77. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to HE815464 (Campylobacter phage CP21 complete sequence) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
taaatcatttttaaacaatataaaaaaagt	Protospacer
******** *********** ** * .*. 

78. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
gaagatatgtttaaagaataatatatgaag	Protospacer
 **. .********* ***** *******.

79. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP021873 (Borrelia miyamotoi strain CA17-2241 plasmid lp72, complete sequence) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
ttactcatgattaaacaataaaatagatca	Protospacer
* * ***** *************** .  *

80. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017963 (Virgibacillus halodenitrificans strain PDB-F2 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
tttaaaatgattaaacaataaaatacgaat	Protospacer
*  *  *** ***************.*** 

81. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MH617121 (Microviridae sp. isolate ctdb231, complete genome) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
taacaataattaaaacaataaaatatgaaa	Protospacer
***     .** ******************

82. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013513 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G21, isolate: uvMED-CGR-C84-MedDCM-OCT-S32-C77) position: , mismatch: 7, identity: 0.767

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
tatctttgctttaaataataaaatatgaaa	Protospacer
**  *.   ******.**************

83. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP014451 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S28-C165, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ttcagcacttaattttatgttttttaaaat	Protospacer
*    ************.*********  *

84. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to CAJCJZ010000002 (Enterococcus phage vB_EfaS_140 genome assembly, contig: phage140-genome, whole genome shotgun sequence) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ccaatcacttaatttttcattttttaataa	Protospacer
. * ************ *.*********  

85. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MN693584 (Marine virus AFVG_25M163, complete genome) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
atctagacttaattttacgtttgttaactt	Protospacer
   *  **************** ****.**

86. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_017472 (Lactobacillus amylovorus GRL1118 plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
gtcatcacttaattatacgttttttatctt	Protospacer
    ********** *********** .**

87. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_047948 (Staphylococcus phage phiSA_BS2, complete genome) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ctaccaacataattttacgttttttaactt	Protospacer
. *.. ** ******************.**

88. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013803 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S26-C126, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ttcagcacttaattttatgttttttaaaat	Protospacer
*    ************.*********  *

89. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013815 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S43-C158, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ttcagcacttaattttatgttttttaaaat	Protospacer
*    ************.*********  *

90. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AP013820 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15-MedDCM-OCT-S46-C98, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ttcagcacttaattttatgttttttaaaat	Protospacer
*    ************.*********  *

91. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP027420 (Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

taattcacttaattttacgttttttaattt	CRISPR spacer
ttttatgctaaattttacgttttttaaatt	Protospacer
*  * ..** ***************** **

92. spacer 6.23|2137447|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to KX229736 (Campylobacter phage PC5, complete genome) position: , mismatch: 7, identity: 0.767

acactaagcttagtttctattaataacaaa	CRISPR spacer
aacataagctgattttctattaataacatc	Protospacer
*   ****** * ***************  

93. spacer 6.24|2137513|29|NZ_LT634361|CRISPRCasFinder,CRT matches to MN693555 (Marine virus AFVG_25M96, complete genome) position: , mismatch: 7, identity: 0.759

tgttcagaaaggatatttagatgtaagtt	CRISPR spacer
ctatcagaaaggatgtttagacgtaatat	Protospacer
.  ***********.******.****  *

94. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to NZ_CP032413 (Paenibacillus lautus strain E7593-69 plasmid pAZOPL1, complete sequence) position: , mismatch: 8, identity: 0.704

ctcattttttgtacagtgtttttttcc	CRISPR spacer
gcacttttttgtacagtgtttttccta	Protospacer
 .  *******************... 

95. spacer 3.1|1741267|27|NZ_LT634361|CRISPRCasFinder matches to NZ_CP020864 (Paenibacillus sp. Cedars plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.704

ctcattttttgtacagtgtttttttcc	CRISPR spacer
gcacttttttgtacagtgtttttccta	Protospacer
 .  *******************... 

96. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK448487 (Streptococcus satellite phage Javan419, complete genome) position: , mismatch: 8, identity: 0.733

taacaaggtttataatgcttttggtaaacg	CRISPR spacer
ttcttagttttataatgcttttggtacatc	Protospacer
*  . ** ****************** *. 

97. spacer 6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

aaagtattcaatactgttactttaacttct	CRISPR spacer
acgctattcaatacagctactttaactggg	Protospacer
* . ********** *.**********   

98. spacer 6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_019526 (Enterobacteria phage vB_KleM-RaK2, complete genome) position: , mismatch: 8, identity: 0.733

aaagtattcaatactgttactttaacttct	CRISPR spacer
aaagcattcaatactgtttcttttgttgta	Protospacer
****.************* **** ..* . 

99. spacer 6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MT708547 (Klebsiella phage Muenster, complete genome) position: , mismatch: 8, identity: 0.733

aaagtattcaatactgttactttaacttct	CRISPR spacer
aaagcattcaatactgtttcttttgttgta	Protospacer
****.************* **** ..* . 

100. spacer 6.6|2136327|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to AB897757 (Klebsiella phage K64-1 DNA, complete genome) position: , mismatch: 8, identity: 0.733

aaagtattcaatactgttactttaacttct	CRISPR spacer
aaagcattcaatactgtttcttttgttgta	Protospacer
****.************* **** ..* . 

101. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 8, identity: 0.724

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagattaatatttccatatttaat	Protospacer
******************.**  ..*  .

102. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK250016 (Prevotella phage Lak-A1, complete genome) position: , mismatch: 8, identity: 0.724

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagattaatatttccatatttaat	Protospacer
******************.**  ..*  .

103. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 8, identity: 0.724

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagattaatatttccatatttaat	Protospacer
******************.**  ..*  .

104. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP016596 (Bacillus cereus strain K8 plasmid pBCM301, complete sequence) position: , mismatch: 8, identity: 0.724

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
ttaaaaagattaataatatcaattacagt	Protospacer
*************** * *****. .  .

105. spacer 6.10|2136591|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009619 (Vibrio coralliilyticus strain RE98 plasmid p380, complete sequence) position: , mismatch: 8, identity: 0.724

aaaaaaccacttaaaaagtaagtatatca	CRISPR spacer
gccaaaacacttaaaaagtaagtaattag	Protospacer
.  *** *****************  * .

106. spacer 6.13|2136787|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to KP836355 (Marinitoga camini virus 1, complete genome) position: , mismatch: 8, identity: 0.733

tacgggtaataccataatccattaattctt	CRISPR spacer
ttacttcaatatcataatccattaaatctt	Protospacer
*     .****.************* ****

107. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_017383 (Helicobacter pylori v225d plasmid pHPv225d, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

108. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM583823 (Helicobacter pylori strain UM426 plasmid pUM426, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

109. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM583818 (Helicobacter pylori strain UM171 plasmid pUM171, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

110. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM583819 (Helicobacter pylori strain UM196 plasmid pUM196, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

111. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM583816 (Helicobacter pylori strain UM146 plasmid pUM146, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

112. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KM583812 (Helicobacter pylori strain UM096 plasmid pUM096, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

113. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_005917 (Helicobacter pylori plasmid pAL202, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

114. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_004950 (Helicobacter pylori plasmid pHel4 complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

115. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_001476 (Helicobacter pylori plasmid pHPM186, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

116. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP049810 (Acinetobacter pittii strain A1254 plasmid pA1254_4, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
attttcatgtttaaacattaaaataatata	Protospacer
    ************* *******  * *

117. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053257 (Helicobacter pylori A45 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

118. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_011334 (Helicobacter pylori G27 plasmid pHPG27, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

119. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_004845 (Helicobacter pylori plasmid pHPM8, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

120. spacer 6.14|2136853|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_017373 (Helicobacter pylori SouthAfrica7 plasmid, complete sequence) position: , mismatch: 8, identity: 0.733

taaatcatgtttaaacaataaaatatgaaa	CRISPR spacer
agaatcatctttaaaaaataaaataatgac	Protospacer
 .****** ****** *********  .* 

121. spacer 6.16|2136985|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MT774380 (CrAssphage cr1_1, complete genome) position: , mismatch: 8, identity: 0.733

gcttatacggaaacgctcaattcagaaatt	CRISPR spacer
aactatacggaaacgcacgattcagagaag	Protospacer
. .************* *.*******.*  

122. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK804893 (Aeromonas phage 2-L372D, complete genome) position: , mismatch: 8, identity: 0.733

taattcacttaattttacgttttttaattt	CRISPR spacer
tcccaaacttaattttatgttctttaattg	Protospacer
*  .  ***********.***.******* 

123. spacer 6.20|2137249|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_048770 (Aeromonas phage 2_L372X, complete genome) position: , mismatch: 8, identity: 0.733

taattcacttaattttacgttttttaattt	CRISPR spacer
tcccaaacttaattttatgttctttaattg	Protospacer
*  .  ***********.***.******* 

124. spacer 6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to LN881738 (Escherichia phage slur17, complete genome) position: , mismatch: 8, identity: 0.733

aaaggtgtttcaagtatgaaagatttttcc	CRISPR spacer
caaggtttttcaagtataaaagataaagct	Protospacer
 ***** **********.******    *.

125. spacer 6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to KU057941 (Clostridium phage CDSH1, complete genome) position: , mismatch: 8, identity: 0.733

aaaggtgtttcaagtatgaaagatttttcc	CRISPR spacer
caaggtttttcaagtataaaagataaagct	Protospacer
 ***** **********.******    *.

126. spacer 6.22|2137381|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to HM568888 (Clostridium phage phiCD38-2, complete genome) position: , mismatch: 8, identity: 0.733

aaaggtgtttcaagtatgaaagatttttcc	CRISPR spacer
caaggtttttcaagtataaaagataaagct	Protospacer
 ***** **********.******    *.

127. spacer 6.23|2137447|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014175 (Clostridium argentinense strain 89G plasmid pRSJ17_1, complete sequence) position: , mismatch: 8, identity: 0.733

acactaagcttagtttctattaataacaaa	CRISPR spacer
tcactaagtttagttactattaatgcttta	Protospacer
 *******.****** ********. .  *

128. spacer 6.3|2136130|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MG945885 (UNVERIFIED: Microviridae sp. isolate 1113-1602, partial genome) position: , mismatch: 9, identity: 0.7

taacaaggtttataatgcttttggtaaacg	CRISPR spacer
tgctaacgtttataatgcttttggttctgc	Protospacer
*. .** ******************     

129. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_017182 (Zymomonas mobilis subsp. mobilis ATCC 10988 plasmid pZMOB05, complete sequence) position: , mismatch: 9, identity: 0.69

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
aaaaaaagattattattttcaatgggtta	Protospacer
  ********** **********   .. 

130. spacer 6.7|2136393|29|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to MK448930 (Streptococcus phage Javan406, complete genome) position: , mismatch: 9, identity: 0.69

ttaaaaagattaatattttcaatcctccc	CRISPR spacer
gagaaaatattaatattttcaatcacagt	Protospacer
  .**** **************** .  .

131. spacer 4.2|1896988|34|NZ_LT634361|CRISPRCasFinder matches to NZ_CP038259 (Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence) position: , mismatch: 10, identity: 0.706

cgccttggaggtgctttattgcggtaaaaaccaa	CRISPR spacer
acatatggaggtgctttattacggttaaaacagg	Protospacer
   . ***************.**** ***** ..

132. spacer 4.2|1896988|34|NZ_LT634361|CRISPRCasFinder matches to NZ_CP038259 (Acinetobacter baumannii strain 39741 plasmid pEH_gr13, complete sequence) position: , mismatch: 10, identity: 0.706

cgccttggaggtgctttattgcggtaaaaaccaa	CRISPR spacer
acatatggaggtgctttattacggttaaaacagg	Protospacer
   . ***************.**** ***** ..

133. spacer 6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 10, identity: 0.667

caaaccatctaaatcaacgtgaaaggtatc	CRISPR spacer
ttgtccatctaaatcaacgtgatagcctat	Protospacer
. . ****************** ** .  .

134. spacer 6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 10, identity: 0.667

caaaccatctaaatcaacgtgaaaggtatc	CRISPR spacer
ttgtccatctaaatcaacgtgatagcctat	Protospacer
. . ****************** ** .  .

135. spacer 6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 10, identity: 0.667

caaaccatctaaatcaacgtgaaaggtatc	CRISPR spacer
ttgtccatctaaatcaacgtgatagcctat	Protospacer
. . ****************** ** .  .

136. spacer 6.21|2137315|30|NZ_LT634361|CRISPRCasFinder,CRT,PILER-CR matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 10, identity: 0.667

caaaccatctaaatcaacgtgaaaggtatc	CRISPR spacer
ttgtccatctaaatcaacgtgatagcctat	Protospacer
. . ****************** ** .  .